SYNJ1_HUMAN Blast Output
Archaea
1|Sequence|1|10|MAFSKGFRIY

>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 1 MAFSKGFRIY 10
+A S+GFR+Y
Sbjct: 56 LATSEGFRVY 65


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AFSKGFRIY 10
AF+K FR Y
Sbjct: 373 AFAKAFRTY 381


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 SKGFRIY 10
+KGFR+Y
Sbjct: 162 NKGFRVY 168


>sp|KORC_METJA|2-OXOGLUTARATE synthase subunit KorC|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MAFSKGFRI 9
+AFSKG+ +
Sbjct: 175 LAFSKGYEV 183


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 MAFSKGFRI 9
+AFSKG+ I
Sbjct: 213 LAFSKGYYI 221


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 MAFSKGFRIY 10
+A +KGF++Y
Sbjct: 42 VAAAKGFKVY 51


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FSKGFRIY 10
F +GFR++
Sbjct: 181 FPRGFRVF 188


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 1 MAFSKGFRIY 10
+AF+ GF I+
Sbjct: 104 LAFAHGFNIH 113


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 1 MAFSKGFRIY 10
++FS GF I+
Sbjct: 103 LSFSHGFNIH 112


>sp|NTPTH_STAMF|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Staphylothermus marinus (strain ATCC 43588

Query: 4 SKGFRI 9
SKGFRI
Sbjct: 43 SKGFRI 48


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 3 FSKGFRIY 10
F +GFR++
Sbjct: 180 FPRGFRVF 187


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 1 MAFSKGFRIY 10
++FS GF I+
Sbjct: 103 LSFSHGFNIH 112


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MAFSKGFRIY 10
+A +GF++Y
Sbjct: 42 IAVERGFKVY 51


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 1 MAFSKGFRIY 10
++FS GF I+
Sbjct: 103 LSFSHGFNIH 112


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 1 MAFSKGFRIY 10
++FS GF I+
Sbjct: 103 LSFSHGFNIH 112


>sp|ILVC_METMP|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 1 MAFSKGFRIY 10
++FS GF I+
Sbjct: 103 LSFSHGFNIH 112




2|Sequence|6|15|GFRIYHKLDP

>sp|Y941_ARCFU|UNCHARACTERIZED protein AF_0941|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFRIYHKLDP 10
GF+I KLDP
Sbjct: 88 GFKIEKKLDP 97


>sp|SURE_METAR|5'-NUCLEOTIDASE SurE|Methanocella arvoryzae (strain DSM 22066

Query: 4 IYHKLDP 10
++H++DP
Sbjct: 203 VHHRMDP 209


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GFRIYHKLDP 10
G R+Y DP
Sbjct: 257 GHRVYKTYDP 266


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IYHKLD 9
IYH+LD
Sbjct: 277 IYHRLD 282


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GFRIYHKLDP 10
G R+Y DP
Sbjct: 262 GHRVYKTYDP 271


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FRIYHKLDP 10
+ +YH +DP
Sbjct: 24 WHLYHVIDP 32


>sp|HEM3_SACS2|PROBABLE porphobilinogen deaminase|Saccharolobus solfataricus (strain ATCC

Query: 6 HKLDP 10
HKLDP
Sbjct: 109 HKLDP 113


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FRIYHKLDP 10
+ +YH +DP
Sbjct: 24 WHLYHIIDP 32


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GFRIYHKLDP 10
G R+Y DP
Sbjct: 262 GHRVYKTYDP 271


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YHKLD 9
YHKLD
Sbjct: 178 YHKLD 182


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 5 YHKLD 9
YHKLD
Sbjct: 178 YHKLD 182


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 YHKLD 9
YHKLD
Sbjct: 178 YHKLD 182


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 GFRIYHKLDP 10
G R+Y+ DP
Sbjct: 264 GHRVYNVKDP 273


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FRIYHKLDP 10
+ IYH DP
Sbjct: 660 YGIYHMTDP 668


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 YHKLDP 10
YHKL P
Sbjct: 245 YHKLQP 250


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain

Query: 2 FRIYHKLD 9
FRI H LD
Sbjct: 5 FRIKHTLD 12


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 5 YHKLD 9
YHKLD
Sbjct: 91 YHKLD 95




3|Sequence|11|20|HKLDPPPFSL

>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 DPPPF 8
DPPPF
Sbjct: 76 DPPPF 80


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DPPPFSL 10
DPP FSL
Sbjct: 211 DPPRFSL 217


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 LDPPPFS 9
LDPP F+
Sbjct: 291 LDPPAFT 297


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 1 HKLDPP 6
H++DPP
Sbjct: 96 HRVDPP 101


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 3 LDPPPFS 9
LDPP F+
Sbjct: 290 LDPPAFA 296


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LDPPPFSL 10
LDP PF L
Sbjct: 204 LDPEPFML 211


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 HKLDPPPFSL 10
H DP PF++
Sbjct: 345 HSTDPVPFAI 354


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 3 LDPPPFSL 10
L+P PF+L
Sbjct: 796 LEPSPFTL 803


>sp|HEM3_SACS2|PROBABLE porphobilinogen deaminase|Saccharolobus solfataricus (strain ATCC

Query: 1 HKLDP 5
HKLDP
Sbjct: 109 HKLDP 113


>sp|NADM_IGNH4|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 LDPPPF 8
L+PPPF
Sbjct: 117 LEPPPF 122


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HKLDPPPF 8
HKL PP +
Sbjct: 250 HKLTPPAY 257


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 HKLDPPPFSL 10
H DP PF++
Sbjct: 349 HTRDPIPFAI 358


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HKLDPPPFSL 10
H DP PF++
Sbjct: 349 HTRDPIPFAI 358


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HKLDPPPFSL 10
H +P PF+L
Sbjct: 335 HVAEPVPFTL 344


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HKLDPPPFSL 10
H DP PF++
Sbjct: 349 HARDPVPFAV 358


>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 2 KLDPPP 7
+LDPPP
Sbjct: 109 RLDPPP 114




4|Sequence|16|25|PPFSLIVETR

>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PPFSLIVET 9
PPF +VET
Sbjct: 526 PPFVGLVET 534


>sp|RNP1_HYPBU|RIBONUCLEASE P protein component 1|Hyperthermus butylicus (strain DSM 5456

Query: 4 SLIVETR 10
SL+VETR
Sbjct: 42 SLVVETR 48


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 PFSLIVET 9
PF ++VET
Sbjct: 1055 PFGIMVET 1062


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 FSLIVETR 10
FS+ VETR
Sbjct: 139 FSITVETR 146




5|Sequence|21|30|IVETRHKEEC

>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 IVETRHKE 8
I+E RHKE
Sbjct: 105 IIEPRHKE 112


>sp|RS8_NITMS|SMALL ribosomal subunit protein uS8|Nitrosopumilus maritimus (strain

Query: 3 ETRHKEEC 10
ETR K EC
Sbjct: 18 ETRRKGEC 25


>sp|Y3509_METJA|UNCHARACTERIZED protein MJECL09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVETRHKEEC 10
IVE +HKEE
Sbjct: 15 IVEEQHKEEI 24


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 1 IVETRHKE 8
I+E +HKE
Sbjct: 105 IIEPKHKE 112


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVETRHKE 8
I+E +HKE
Sbjct: 105 IIEPKHKE 112


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 IVETRHKE 8
I+E +HKE
Sbjct: 105 IIEEKHKE 112


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IVETRHKEE 9
I+E +HKE+
Sbjct: 105 IIERKHKEQ 113




6|Sequence|26|35|HKEECLMFES

>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 4 ECLMFES 10
+CL+FES
Sbjct: 245 QCLVFES 251


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 2 KEECLMFE 9
K+EC +FE
Sbjct: 119 KKECKLFE 126


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 4 ECLMFES 10
+CL+FES
Sbjct: 245 QCLVFES 251


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ECLMFES 10
+CL+FES
Sbjct: 245 QCLVFES 251


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 ECLMFES 10
+CL+FES
Sbjct: 245 QCLVFES 251




7|Sequence|31|40|LMFESGAVAV

>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 LMFESGAV 8
LMFE+GAV
Sbjct: 26 LMFETGAV 33


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LMFESGAV 8
LMFE+GAV
Sbjct: 27 LMFETGAV 34


>sp|EF1A_METB6|ELONGATION factor 1-alpha|Methanoregula boonei (strain DSM 21154

Query: 1 LMFESGAV 8
+MFE+GAV
Sbjct: 27 MMFETGAV 34


>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LMFESGAV 8
LM+E+GAV
Sbjct: 27 LMYEAGAV 34


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 LMFESGAV 8
L+FE+GAV
Sbjct: 27 LLFETGAV 34


>sp|EF1A_METAC|ELONGATION factor 1-alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LMFESGAV 8
LM+E+GAV
Sbjct: 27 LMYEAGAV 34




8|Sequence|36|45|GAVAVLSSAE

>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 GAVAVLSSAE 10
GAV +L+SAE
Sbjct: 44 GAVTLLASAE 53




9|Sequence|41|50|LSSAEKEAIK

>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 LSSAEKEAIK 10
LSSAE++A+K
Sbjct: 34 LSSAEEQALK 43


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SAEKEAI 9
SAEKEAI
Sbjct: 250 SAEKEAI 256


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 LSSAEKEAIK 10
+S EKEAIK
Sbjct: 53 VSDDEKEAIK 62




10|Sequence|46|55|KEAIKGTYSK

>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KEAIKGTYSK 10
+EA+KG +SK
Sbjct: 235 QEALKGNFSK 244


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KEAIKGTYSK 10
KE I+G Y K
Sbjct: 43 KEIIEGKYGK 52


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 KEAIKGTYSK 10
KE I+G Y K
Sbjct: 43 KEIIEGRYGK 52


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 KEAIKGTYSK 10
KE I+G Y K
Sbjct: 43 KEIIEGRYGK 52


>sp|PORC_PYRFU|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Pyrococcus furiosus (strain

Query: 1 KEAIKGTYS 9
+EAIK T+S
Sbjct: 154 EEAIKDTFS 162


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 IKGTYSK 10
IKG YSK
Sbjct: 185 IKGKYSK 191


>sp|PORC_THELN|PYRUVATE/KETOISOVALERATE oxidoreductases common subunit gamma|Thermococcus litoralis (strain

Query: 1 KEAIKGTYS 9
+EAIK T+S
Sbjct: 154 EEAIKDTFS 162


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AIKGTYSK 10
A KG YSK
Sbjct: 312 AFKGVYSK 319


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 AIKGTYSK 10
A KG YSK
Sbjct: 321 AFKGVYSK 328


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EAIKGTYSK 10
EA+KG++ K
Sbjct: 236 EAVKGSFGK 244


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KEAIKGTYSK 10
+EA+ TYSK
Sbjct: 76 EEAVSETYSK 85




11|Sequence|51|60|GTYSKVLDAY

>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 YSKVLDAY 10
YSK LDAY
Sbjct: 180 YSKDLDAY 187


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTYSKVLDAY 10
G Y K +DA+
Sbjct: 17 GVYEKAVDAF 26


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTYSKVLDAY 10
G Y+K+ D+Y
Sbjct: 299 GKYTKLRDSY 308


>sp|BRIX_METBF|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 3 YSKVLDAY 10
YSK LD+Y
Sbjct: 80 YSKELDSY 87


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GTYSKVLDAY 10
G Y K+ DAY
Sbjct: 295 GKYVKLRDAY 304


>sp|GCH31_HALSA|GTP cyclohydrolase III 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTYSKVLDAY 10
GTY+ LDA+
Sbjct: 149 GTYTDELDAF 158


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YSKVLDAY 10
Y KVLD Y
Sbjct: 61 YDKVLDDY 68


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 5 KVLDAY 10
KVLDAY
Sbjct: 131 KVLDAY 136


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GTYSKVLDAY 10
G Y+K+ D+Y
Sbjct: 296 GKYTKLKDSY 305


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GTYSKVLDAY 10
G Y+K+ D+Y
Sbjct: 297 GKYTKLKDSY 306


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTYSKVLDAY 10
G Y+K+ D+Y
Sbjct: 300 GKYTKLKDSY 309


>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 YSKVLDAY 10
Y K+L+AY
Sbjct: 58 YEKILEAY 65


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 GTYSKVL 7
GT+SK+L
Sbjct: 254 GTFSKIL 260


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTYSKVLDA 9
GT+ +LDA
Sbjct: 549 GTFEAILDA 557


>sp|CSM2_METJA|CRISPR system Cms protein Csm2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GTYSKVLD 8
GT+S+++D
Sbjct: 96 GTFSEIID 103




12|Sequence|56|65|VLDAYGLLGV

>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLDAYGLLGV 10
V+D Y LLG+
Sbjct: 80 VMDGYKLLGL 89


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 VLDAYGLLGV 10
V DAYGL+ V
Sbjct: 136 VKDAYGLITV 145


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 VLDAYGLLGV 10
V DAYGL+ V
Sbjct: 136 VKDAYGLITV 145


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 VLDAYGLLGV 10
V DAYGL+ V
Sbjct: 136 VKDAYGLITV 145


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 VLDAYGLLGV 10
V DAYGL+ V
Sbjct: 139 VKDAYGLITV 148


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VLDAYGLLGV 10
V DAYGL+ V
Sbjct: 136 VKDAYGLITV 145


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 VLDAYGLLGV 10
VL+AY LGV
Sbjct: 138 VLEAYAKLGV 147


>sp|FBPAP_PYRNV|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DAYGLLGV 10
DAY LLG+
Sbjct: 186 DAYSLLGL 193


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 VLDAYGLLG 9
+L A+GL+G
Sbjct: 851 ILKAFGLIG 859


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LDAYGLLG 9
+D YGL+G
Sbjct: 1 MDIYGLIG 8


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 VLDAYG 6
VLDAYG
Sbjct: 132 VLDAYG 137


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VLDAYGLLG 9
V+D YGL G
Sbjct: 119 VIDGYGLSG 127


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 2 LDAYGLLG 9
+D YGL+G
Sbjct: 1 MDVYGLIG 8


>sp|RS4_METLZ|SMALL ribosomal subunit protein uS4|Methanocorpusculum labreanum

Query: 2 LDAYGLLG 9
L YGLLG
Sbjct: 82 LQRYGLLG 89


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLDAYGLLGV 10
++DAY LG+
Sbjct: 866 LMDAYDKLGI 875


>sp|AROE_HALSA|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 2 LDAYGLLG 9
+D YGL+G
Sbjct: 1 MDVYGLIG 8


>sp|AROE_HALS3|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 2 LDAYGLLG 9
+D YGL+G
Sbjct: 1 MDVYGLIG 8


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 1 VLDAYGLLGV 10
V++AY LG+
Sbjct: 138 VIEAYAKLGI 147


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC

Query: 2 LDAYGLLG 9
+D YGL+G
Sbjct: 1 MDVYGLIG 8


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 2 LDAYGLLG 9
+D YGL+G
Sbjct: 1 MDVYGLIG 8


>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LDAYGLLG 9
L AYGLLG
Sbjct: 14 LVAYGLLG 21


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLDAYG 6
+LDAYG
Sbjct: 134 ILDAYG 139




13|Sequence|61|70|GLLGVLRLNL

>sp|Y229_SULTO|PROTEIN STK_02290|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LGVLRLNL 10
LG+L++NL
Sbjct: 32 LGILKINL 39




14|Sequence|66|75|LRLNLGDTML

>sp|RL24_HALSA|LARGE ribosomal subunit protein uL24|Halobacterium salinarum (strain

Query: 1 LRLNLGDTM 9
+R+N+GDT+
Sbjct: 41 VRVNVGDTV 49


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRLNLGDTM 9
LRLNLG+ +
Sbjct: 416 LRLNLGEIL 424


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LRLNLGDTML 10
LN+GD ML
Sbjct: 190 FELNVGDEML 199


>sp|RL24_NATPD|LARGE ribosomal subunit protein uL24|Natronomonas pharaonis (strain

Query: 1 LRLNLGDTM 9
+R+N GDT+
Sbjct: 41 VRVNAGDTV 49


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LRLNLGDTML 10
L +N GD ML
Sbjct: 28 LNVNYGDVML 37


>sp|RL24_HALWD|LARGE ribosomal subunit protein uL24|Haloquadratum walsbyi (strain DSM

Query: 1 LRLNLGDTM 9
+R+N GDT+
Sbjct: 41 VRVNAGDTV 49


>sp|RL24_HALMA|LARGE ribosomal subunit protein uL24|Haloarcula marismortui (strain

Query: 1 LRLNLGDTM 9
+R+N GDT+
Sbjct: 41 VRVNAGDTV 49




15|Sequence|71|80|GDTMLHYLVL

>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein MTH_1914|Methanothermobacter

Query: 1 GDTMLHYL 8
G T+ HYL
Sbjct: 98 GSTVFHYL 105


>sp|Y123_METJA|UNCHARACTERIZED protein MJ0123|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DTMLHYLVL 10
+ +LHY++L
Sbjct: 60 EELLHYIIL 68


>sp|TMPS_METJA|THYMIDYLATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDTMLH 6
GDT+LH
Sbjct: 239 GDTILH 244


>sp|GVPA_HALWD|GAS vesicle protein A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DTMLHY 7
DT LHY
Sbjct: 49 DTFLHY 54


>sp|GVPA_HALVU|GAS vesicle protein A|Halorubrum vacuolatum (Natronobacterium

Query: 2 DTMLHY 7
DT LHY
Sbjct: 49 DTFLHY 54


>sp|GVPA_HALMT|GAS vesicle protein A|Haloferax mediterranei (strain ATCC 33500

Query: 2 DTMLHY 7
DT LHY
Sbjct: 49 DTFLHY 54


>sp|GVPA1_HALSA|GAS vesicle protein A1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DTMLHY 7
DT LHY
Sbjct: 49 DTFLHY 54


>sp|PDXT_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Aeropyrum pernix (strain ATCC

Query: 1 GDTMLHYLVL 10
GDT LH L L
Sbjct: 189 GDTRLHELWL 198


>sp|LYSK_AERPE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Aeropyrum pernix (strain

Query: 1 GDTMLHYLV 9
GDT LH +V
Sbjct: 142 GDTPLHIIV 150


>sp|GVPA2_HALSA|GAS vesicle protein A2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DTMLHY 7
DT LHY
Sbjct: 49 DTFLHY 54


>sp|BIOD_META3|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus aeolicus (strain ATCC

Query: 2 DTMLHY 7
DT+LHY
Sbjct: 173 DTVLHY 178


>sp|Y761_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ0761|Methanocaldococcus jannaschii

Query: 1 GDTMLHYL 8
G+T LHYL
Sbjct: 100 GETGLHYL 107


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GDTMLHYLV 9
G+T+L+Y++
Sbjct: 756 GETLLYYVL 764


>sp|YORA_PYRWO|UNCHARACTERIZED 24.7 kDa protein in|Pyrococcus woesei

Query: 4 MLHYLVL 10
+LHYLVL
Sbjct: 47 LLHYLVL 53




16|Sequence|76|85|HYLVLVTGCM

>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 HYLVLVTGCM 10
+Y+V+ TGCM
Sbjct: 532 NYIVVTTGCM 541


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 2 YLVLVTGCM 10
YLVLV GC+
Sbjct: 401 YLVLVPGCL 409


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 YLVLVTGCM 10
Y+V+ TGCM
Sbjct: 531 YIVVATGCM 539


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 HYLVLVTGC 9
+YLV+V+GC
Sbjct: 543 NYLVVVSGC 551


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 HYLVLVTGC 9
+Y+V+ TGC
Sbjct: 538 NYIVVTTGC 546


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 2 YLVLVTGC 9
Y+V+V+GC
Sbjct: 541 YIVVVSGC 548


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 HYLVLVTGC 9
+Y+VL +GC
Sbjct: 517 NYIVLTSGC 525


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HYLVLVTGC 9
HY+V GC
Sbjct: 7 HYIVEAAGC 15


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 HYLVLVTGC 9
HY+V GC
Sbjct: 7 HYIVEAAGC 15


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 YLVLVTGC 9
Y+V+ TGC
Sbjct: 536 YIVVATGC 543


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 HYLVLVTGC 9
+Y+V V+GC
Sbjct: 541 NYIVAVSGC 549


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 4 VLVTGCM 10
V+VTGC+
Sbjct: 71 VIVTGCL 77


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 4 VLVTGCM 10
V+VTGC+
Sbjct: 71 VIVTGCL 77


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 1 HYLVLVTGC 9
HY+V GC
Sbjct: 7 HYVVEAAGC 15


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 1 HYLVLVTGC 9
HY+V GC
Sbjct: 10 HYVVEAAGC 18


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 1 HYLVLVTGC 9
HY+V GC
Sbjct: 10 HYVVEAAGC 18


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HYLVLVTGC 9
HY+V GC
Sbjct: 7 HYVVEAAGC 15


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 HYLVLVTGC 9
+YL+ V+GC
Sbjct: 543 NYLLAVSGC 551


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HYLVLVTGCM 10
HY +L+ CM
Sbjct: 430 HYHMLMISCM 439


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 1 HYLVLV 6
HYLVLV
Sbjct: 668 HYLVLV 673


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 4 VLVTGC 9
VLVTGC
Sbjct: 62 VLVTGC 67


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 4 VLVTGC 9
VLVTGC
Sbjct: 62 VLVTGC 67


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 4 VLVTGCM 10
LVTGCM
Sbjct: 287 ALVTGCM 293


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 HYLVLVTGC 9
+Y+V+ TGC
Sbjct: 544 NYIVVGTGC 552


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 YLVLVTGC 9
Y+V+ +GC
Sbjct: 534 YIVVTSGC 541


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 HYLVLV 6
HYL+LV
Sbjct: 218 HYLILV 223


>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 2 YLVLVTGC 9
Y VLV GC
Sbjct: 30 YNVLVIGC 37


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YLVLVTG 8
YLVL TG
Sbjct: 106 YLVLATG 112


>sp|ENO3_METHJ|ENOLASE 3|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YLVLVTGC 9
+LV+ TGC
Sbjct: 153 FLVVPTGC 160


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 4 VLVTGC 9
+L+TGC
Sbjct: 235 ILITGC 240


>sp|Y448_METJA|UNCHARACTERIZED protein MJ0448|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VLVTGC 9
+L+TGC
Sbjct: 171 ILITGC 176


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 HYLVLVTG 8
+YL++VTG
Sbjct: 316 NYLLIVTG 323




17|Sequence|81|90|VTGCMSVGKI

>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC

Query: 4 CMSVGKI 10
CM VGKI
Sbjct: 47 CMKVGKI 53


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 1 VTGCMSVGK 9
V GC SVGK
Sbjct: 15 VFGCGSVGK 23


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 CMSVGKI 10
C+SVGK+
Sbjct: 274 CISVGKV 280


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VTGCMSVG 8
+TGC+ +G
Sbjct: 1 MTGCLKIG 8


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 CMSVGKI 10
C+++GKI
Sbjct: 524 CLAIGKI 530


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TGCMSVGKI 10
T C+SVG++
Sbjct: 32 TKCISVGEL 40


>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTGCMSVGKI 10
+TGC S GKI
Sbjct: 1 MTGCGSCGKI 10


>sp|RS8_METMP|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 VTGCMSVGK 9
V+ C SVGK
Sbjct: 14 VSNCESVGK 22


>sp|RS8_METM7|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 VTGCMSVGK 9
V+ C SVGK
Sbjct: 14 VSNCESVGK 22


>sp|RS8_METM5|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 VTGCMSVGK 9
V+ C SVGK
Sbjct: 14 VSNCESVGK 22


>sp|RS8_METM6|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 VTGCMSVGK 9
V+ C SVGK
Sbjct: 14 VSNCESVGK 22


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VTGCMSVGKI 10
+ GC+++G+I
Sbjct: 262 LAGCITLGEI 271


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 VTGCMSVGK 9
+TGC GK
Sbjct: 144 ITGCPVAGK 152




18|Sequence|86|95|SVGKIQESEV

>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 VGKIQESE 9
VGKI+E+E
Sbjct: 575 VGKIKEAE 582


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SVGKIQESEV 10
+ GK++E+EV
Sbjct: 124 TTGKVRENEV 133




19|Sequence|91|100|QESEVFRVTS

>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 QESEVFRVT 9
QE E++R+T
Sbjct: 65 QEKEIYRLT 73


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESEVFRVTS 10
ES+ FRV S
Sbjct: 332 ESQAFRVAS 340




20|Sequence|96|105|FRVTSTEFIS

***** No hits found ******


21|Sequence|101|110|TEFISLRIDS

>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 1 TEFISLRID 9
TEFI L+ID
Sbjct: 222 TEFIKLKID 230


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EFISLRID 9
EF S+RID
Sbjct: 414 EFCSMRID 421


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EFISLRID 9
EF S+RID
Sbjct: 413 EFCSMRID 420




22|Sequence|106|115|LRIDSSDEDR

>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 DSSDEDR 10
D+SDED+
Sbjct: 339 DASDEDK 345


>sp|SYT_PYRHO|THREONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LRIDSSDED 9
+R+D DED
Sbjct: 538 IRVDVDDED 546


>sp|SYT_PYRAB|THREONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LRIDSSDED 9
+R+D DED
Sbjct: 538 IRVDVDDED 546




23|Sequence|111|120|SDEDRISEVR

>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SDEDRISEVR 10
+DED+I+E+R
Sbjct: 75 ADEDKINELR 84


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DEDRISEVR 10
DED+I+E+R
Sbjct: 79 DEDKINELR 87


>sp|Y550_METJA|UNCHARACTERIZED protein MJ0550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEDRISEVR 10
DED+++E+R
Sbjct: 155 DEDKLNEIR 163


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DEDRISEVR 10
DED I++VR
Sbjct: 228 DEDLINQVR 236


>sp|Y4223_METAC|UPF0228 protein MA_4223|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DEDRISEVR 10
DED+I E+R
Sbjct: 76 DEDKIYELR 84


>sp|Y393_METMA|UPF0228 protein MM_0393|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DEDRISEVR 10
DED+I E+R
Sbjct: 76 DEDKIYELR 84


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 SDEDRISEV 9
SDEDR++ V
Sbjct: 398 SDEDRLARV 406


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 3 EDRISEVR 10
EDRI E+R
Sbjct: 4 EDRIDELR 11




24|Sequence|116|125|ISEVRKVLNS

>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ISEVRKVLNS 10
ISEV KVLN+
Sbjct: 398 ISEVNKVLNA 407


>sp|TRUD_SACS2|PROBABLE tRNA pseudouridine synthase D|Saccharolobus solfataricus (strain

Query: 1 ISEVRKVLNS 10
ISEV+KVL+S
Sbjct: 71 ISEVQKVLHS 80


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ISEVRKVLN 9
+ ++RKVLN
Sbjct: 494 VQKIRKVLN 502


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ISEVRKVLNS 10
+SE+RK NS
Sbjct: 746 VSEMRKYKNS 755


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 1 ISEVRKVLNS 10
ISE+ K+L+S
Sbjct: 64 ISEISKILHS 73


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 3 EVRKVLNS 10
E RK+LNS
Sbjct: 394 EPRKILNS 401


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISEVRKVLNS 10
+SE+RK NS
Sbjct: 746 VSEMRKYKNS 755


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISEVRKVLN 9
+ E+RK+LN
Sbjct: 325 LKEIRKLLN 333


>sp|SYH_SULTO|HISTIDINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ISEVRKVLN 9
IS +RK+LN
Sbjct: 164 ISLIRKILN 172


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 SEVRKVL 8
SE+RKVL
Sbjct: 197 SEIRKVL 203


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 ISEVRKVLN 9
ISE +K+LN
Sbjct: 129 ISEYKKLLN 137


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 ISEVRKVLN 9
+S +RKVLN
Sbjct: 39 VSNLRKVLN 47




25|Sequence|121|130|KVLNSGNFYF

>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 5 SGNFYF 10
+GNFYF
Sbjct: 280 NGNFYF 285


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SGNFYF 10
+GNFYF
Sbjct: 279 NGNFYF 284


>sp|DTDA_METBU|D-AMINOACYL-TRNA deacylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VLNSGNFY 9
V SGNFY
Sbjct: 54 VYQSGNFY 61


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KVLNSGNF 8
K++NSGN
Sbjct: 4 KIINSGNL 11


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 4 NSGNFY 9
NSGN+Y
Sbjct: 203 NSGNYY 208


>sp|Y361_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0361|Methanocaldococcus

Query: 1 KVLNSGNFYF 10
K+LNS + YF
Sbjct: 16 KLLNSKDMYF 25


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 VLNSGNF 8
+LN+GNF
Sbjct: 276 LLNTGNF 282


>sp|RL10E_CALMQ|LARGE ribosomal subunit protein uL16|Caldivirga maquilingensis (strain

Query: 1 KVLNSGNFYF 10
KVL NFY
Sbjct: 78 KVLTDQNFYL 87


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVLNSGNFY 9
KV GNFY
Sbjct: 203 KVEREGNFY 211


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 4 NSGNFYF 10
N GN+Y+
Sbjct: 203 NKGNYYY 209


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 3 LNSGNFYF 10
+NSGN +F
Sbjct: 1 MNSGNLFF 8


>sp|RS4E_PYRHO|SMALL ribosomal subunit protein eS4|Pyrococcus horikoshii (strain ATCC

Query: 1 KVLNSGNF 8
K+LN G F
Sbjct: 64 KILNEGKF 71


>sp|RS4E_PYRFU|SMALL ribosomal subunit protein eS4|Pyrococcus furiosus (strain ATCC

Query: 1 KVLNSGNF 8
K+LN G F
Sbjct: 64 KILNEGKF 71


>sp|RS4E_PYRAB|SMALL ribosomal subunit protein eS4|Pyrococcus abyssi (strain GE5 /

Query: 1 KVLNSGNF 8
K+LN G F
Sbjct: 64 KILNEGKF 71


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVLNSGNFYF 10
K+L+SGN +
Sbjct: 31 KILSSGNIQY 40


>sp|Y607_METJA|UNCHARACTERIZED protein MJ0607|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVLNSGNFY 9
K+LN+ FY
Sbjct: 37 KILNNKEFY 45




26|Sequence|126|135|GNFYFAWSAS

>sp|EF1A_METHJ|ELONGATION factor 1-alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GNFYFAW 7
G+F FAW
Sbjct: 52 GSFAFAW 58


>sp|PSA_PYRHO|PROTEASOME subunit alpha|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 YFAWSA 9
YFAW A
Sbjct: 158 YFAWKA 163


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 4 YFAWSA 9
YFAW A
Sbjct: 158 YFAWKA 163


>sp|PSA_PYRAB|PROTEASOME subunit alpha|Pyrococcus abyssi (strain GE5 /

Query: 4 YFAWSA 9
YFAW A
Sbjct: 158 YFAWKA 163


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GNFYFAW 7
G+F FAW
Sbjct: 52 GSFEFAW 58


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GNFYFAW 7
G+F FAW
Sbjct: 52 GSFEFAW 58


>sp|PSB1_PYRHO|PROTEASOME subunit beta 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FYFAW 7
+YFAW
Sbjct: 72 YYFAW 76


>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 GNFYFAW 7
G F FAW
Sbjct: 52 GTFEFAW 58


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GNFYF 5
GNFYF
Sbjct: 281 GNFYF 285


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GNFYF 5
GNFYF
Sbjct: 280 GNFYF 284


>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FYFAWSAS 10
F+F W+AS
Sbjct: 13 FFFMWAAS 20


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 GNFYFAW 7
G F FAW
Sbjct: 329 GMFVFAW 335


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 1 GNFYFAWS 8
GN +F W+
Sbjct: 4 GNLFFGWA 11


>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NFYFAWSAS 10
++Y+AW A+
Sbjct: 29 DYYWAWVAA 37


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 4 YFAWSAS 10
YFAW+++
Sbjct: 452 YFAWASA 458


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 4 YFAWSAS 10
Y AW+AS
Sbjct: 1443 YLAWNAS 1449


>sp|Y1291_METJA|UNCHARACTERIZED protein MJ1291|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GNFYFAWS 8
G Y+AWS
Sbjct: 23 GAAYYAWS 30


>sp|Y1631_PYRHO|PUTATIVE uncharacterized protein PH1631|Pyrococcus horikoshii (strain ATCC

Query: 1 GNFYFAWSA 9
GN Y WSA
Sbjct: 75 GNIYKHWSA 83




27|Sequence|131|140|AWSASGISLD

>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 WSASGIS 8
WSA GI+
Sbjct: 60 WSAEGIA 66


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 WSASGIS 8
WSA GI+
Sbjct: 60 WSAEGIA 66


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 WSASGIS 8
WSA GI+
Sbjct: 60 WSAEGIA 66


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 WSASGIS 8
WSA GI+
Sbjct: 60 WSAEGIA 66


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 AWSASGISLD 10
+W+ SG+ +D
Sbjct: 91 SWTLSGLDVD 100




28|Sequence|136|145|GISLDLSLNA

>sp|CSG_HALVD|CELL surface glycoprotein|Haloferax volcanii (strain ATCC 29605

Query: 1 GISLDLS 7
G+SLDLS
Sbjct: 84 GVSLDLS 90




29|Sequence|141|150|LSLNAHRSMQ

>sp|SYFB_METAC|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSLNAHRSM 9
LSLN HR +
Sbjct: 428 LSLNQHREL 436


>sp|CETZ4_HALVD|TUBULIN-LIKE protein CetZ4|Haloferax volcanii (strain ATCC 29605

Query: 2 SLNAHRSMQ 10
SLNA RS+Q
Sbjct: 147 SLNAARSLQ 155


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LSLNAHRSMQ 10
L+++AHR+M
Sbjct: 273 LAIHAHRAMH 282


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LSLNAHRSMQ 10
L+++AHR+M
Sbjct: 268 LAIHAHRAMH 277


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 LSLNAHRSMQ 10
L+++AHR+M
Sbjct: 272 LAIHAHRAMH 281


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 LSLNAHRS 8
LSLNAH S
Sbjct: 188 LSLNAHLS 195




30|Sequence|146|155|HRSMQEQTTD

>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HRSMQEQTTD 10
HR ++E T+D
Sbjct: 701 HRYLEEVTSD 710


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HRSMQEQTTD 10
H+S+ E+T D
Sbjct: 15 HKSILEETID 24




31|Sequence|151|160|EQTTDNRFFW

>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 1 EQTTDNRF 8
E TTDN+F
Sbjct: 291 EATTDNKF 298


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 1 EQTTDNRFFW 10
+ DN +FW
Sbjct: 191 DDVEDNHWFW 200




32|Sequence|156|165|NRFFWNQSLH

>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NRFFWN 6
N FFWN
Sbjct: 276 NNFFWN 281


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RFFWN 6
+FFWN
Sbjct: 338 KFFWN 342


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 RFFWN 6
+FFWN
Sbjct: 331 KFFWN 335


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 1 NRFFWNQSLH 10
N F W Q H
Sbjct: 154 NTFLWMQGSH 163


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RFFWNQSL 9
+FFW + L
Sbjct: 26 KFFWTRDL 33


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 5 WNQSL 9
WNQSL
Sbjct: 125 WNQSL 129


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NRFFWN 6
+ FFWN
Sbjct: 620 DNFFWN 625




33|Sequence|161|170|NQSLHLHLKH

>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QSLHLHLKH 10
+ LHL L+H
Sbjct: 1033 RDLHLRLRH 1041


>sp|NIKR_METBU|PUTATIVE nickel-responsive regulator|Methanococcoides burtonii (strain DSM

Query: 3 SLHLHLKH 10
S+H+HL H
Sbjct: 90 SVHIHLDH 97


>sp|AMPPA_METHJ|AMP phosphorylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 LHLHLKH 10
L+LH KH
Sbjct: 451 LYLHAKH 457


>sp|GPMI_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 4 LHLHLKH 10
+H H+KH
Sbjct: 124 VHSHMKH 130


>sp|NIKR_METTP|PUTATIVE nickel-responsive regulator|Methanothrix thermoacetophila (strain

Query: 1 NQSLHLHL 8
N SLH+HL
Sbjct: 88 NSSLHVHL 95




34|Sequence|166|175|LHLKHYGVNC

>sp|AROE_METTP|SHIKIMATE dehydrogenase (NADP(+))|Methanothrix thermoacetophila (strain DSM

Query: 1 LHLKHYGVN 9
L L+HYGVN
Sbjct: 105 LALRHYGVN 113


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HLKHYGVN 9
H +HYG+N
Sbjct: 264 HAEHYGIN 271


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain

Query: 1 LHLKHYGVN 9
+HL YGVN
Sbjct: 89 VHLTMYGVN 97


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 2 HLKHYGVNC 10
HL+ +G+ C
Sbjct: 431 HLREHGIEC 439


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 HLKHYGVNC 10
HLK G NC
Sbjct: 263 HLKKTGFNC 271


>sp|TRM56_METMA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina mazei

Query: 2 HLKHYGVN 9
HL YGVN
Sbjct: 83 HLSMYGVN 90


>sp|TRM56_METAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina acetivorans

Query: 2 HLKHYGVN 9
HL YGVN
Sbjct: 83 HLSMYGVN 90


>sp|TRM56_SACS2|TRNA (cytidine(56)-2'-O)-methyltransferase|Saccharolobus solfataricus

Query: 1 LHLKHYGVN 9
+HL YG+N
Sbjct: 66 IHLTMYGIN 74


>sp|KAD6_THEVO|PUTATIVE adenylate kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LKHYGVNC 10
L+ YG NC
Sbjct: 22 LREYGYNC 29


>sp|TRM56_METAR|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocella arvoryzae

Query: 1 LHLKHYGVN 9
+HL YG+N
Sbjct: 82 VHLTMYGIN 90


>sp|TRM56_METBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcoides burtonii

Query: 2 HLKHYGVN 9
HL YG+N
Sbjct: 83 HLSMYGIN 90


>sp|TRM56_METBF|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosarcina barkeri

Query: 2 HLKHYGVN 9
HL YG+N
Sbjct: 83 HLSMYGIN 90


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae (strain

Query: 2 HLKHYGVNC 10
H K YG+ C
Sbjct: 127 HAKGYGMQC 135


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei

Query: 2 HLKHYGVN 9
HL YG+N
Sbjct: 85 HLTMYGIN 92


>sp|Y635_METJA|UNCHARACTERIZED protein MJ0635|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLKHYGVN 9
HLK GVN
Sbjct: 118 HLKEIGVN 125


>sp|NAT_SACS2|N-ALPHA-ACETYLTRANSFERASE solfataricus (strain ATCC 35092

Query: 2 HLKHYGV 8
HLK YG+
Sbjct: 45 HLKEYGL 51


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula

Query: 1 LHLKHYGVN 9
+HL YG+N
Sbjct: 78 VHLTMYGIN 86


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 4 KHYGVN 9
KHYG N
Sbjct: 474 KHYGYN 479


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 1 LHLKHYGVNC 10
L + YG+NC
Sbjct: 6 LVMSGYGINC 15


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 1 LHLKHYGVNC 10
L + YG+NC
Sbjct: 9 LVMSGYGINC 18


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HLKHYGVN 9
+LK YG+N
Sbjct: 222 YLKRYGLN 229


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LHLKHYGVN 9
L++KH G+N
Sbjct: 90 LYVKHEGMN 98


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 1 LHLKHYGVNC 10
L + YG+NC
Sbjct: 9 LVMSGYGINC 18


>sp|LYSJ_THEKO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 LHLKHYGV 8
L ++HYGV
Sbjct: 214 LAIEHYGV 221


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 2 HLKHYGV 8
+L+HYG+
Sbjct: 228 NLQHYGI 234


>sp|NAT_SULAC|N-ALPHA-ACETYLTRANSFERASE acidocaldarius (strain ATCC 33909

Query: 2 HLKHYG 7
HLK YG
Sbjct: 46 HLKEYG 51


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 3 LKHYGVN 9
+KH GVN
Sbjct: 91 MKHVGVN 97


>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 HYGVNC 10
H+G++C
Sbjct: 44 HFGISC 49


>sp|RFRNP_METBF|RNA-FREE ribonuclease P|Methanosarcina barkeri (strain Fusaro /

Query: 5 HYGVNC 10
H+G++C
Sbjct: 44 HFGISC 49


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LKHYGVN 9
++HYG+N
Sbjct: 283 VEHYGLN 289


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LKHYGVN 9
++HYG+N
Sbjct: 283 VEHYGLN 289


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LKHYGVN 9
++HYG+N
Sbjct: 283 VEHYGLN 289


>sp|GGGPS_THESM|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LHLKHYGV 8
+KHYG+
Sbjct: 118 FRVKHYGI 125


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 LHLKHYG 7
LH K+YG
Sbjct: 722 LHQKYYG 728




35|Sequence|171|180|YGVNCDDWLL

>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YGVNCDDW 8
YG N DDW
Sbjct: 489 YGFNFDDW 496


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YGVNCDDW 8
YG N DDW
Sbjct: 486 YGYNYDDW 493


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YGVNCDDW 8
YG N DDW
Sbjct: 486 YGYNYDDW 493


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YGVNCDDW 8
YG N DDW
Sbjct: 486 YGYNYDDW 493


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGVNCDDW 8
+GV+ DDW
Sbjct: 299 FGVDFDDW 306


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VNCDDW 8
+NC DW
Sbjct: 676 INCKDW 681


>sp|TRM56_AERPE|TRNA (cytidine(56)-2'-O)-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 1 YGVNCDD 7
YGVN DD
Sbjct: 94 YGVNVDD 100


>sp|T2MT_METTF|TYPE II restriction enzyme MthTI|Methanothermobacter thermautotrophicus

Query: 4 NCDDW 8
NC+DW
Sbjct: 120 NCEDW 124


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YGVNCDDW 8
YG N +DW
Sbjct: 486 YGYNYEDW 493


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 1 YGVNCDDWL 9
+G+NC +W
Sbjct: 161 FGMNCPEWF 169


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GVNCDDWLL 10
GVNCD +L
Sbjct: 205 GVNCDGQVL 213


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGVNCDDWLL 10
YGVN D+ L
Sbjct: 101 YGVNVDELFL 110


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 CDDW 8
CDDW
Sbjct: 133 CDDW 136


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 1 YGVNCD 6
YG+NC+
Sbjct: 14 YGINCE 19


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 1 YGVNCD 6
YG+NC+
Sbjct: 14 YGINCE 19


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 1 YGVNCD 6
YG+NC+
Sbjct: 11 YGINCE 16


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GVNCDDW 8
GVN D W
Sbjct: 290 GVNVDKW 296


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 NCDDW 8
NC DW
Sbjct: 376 NCTDW 380


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 NCDDW 8
NC DW
Sbjct: 379 NCTDW 383


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NCDDW 8
NC DW
Sbjct: 373 NCTDW 377


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 NCDDW 8
NC DW
Sbjct: 379 NCTDW 383


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 2 GVNCDDWL 9
V DDWL
Sbjct: 63 AVQLDDWL 70


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 2 GVNCDDWLL 10
GVNCD L
Sbjct: 258 GVNCDGGLF 266


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VNCDDWL 9
V+CD W+
Sbjct: 572 VDCDVWI 578


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 2 GVNCDDWLL 10
G+NCD L
Sbjct: 258 GINCDGGLF 266


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 NCDDWL 9
NC WL
Sbjct: 139 NCSSWL 144


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 3 VNCDDWL 9
++C DW+
Sbjct: 93 IHCHDWM 99


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGVNCDD 7
YG C+D
Sbjct: 189 YGAKCED 195




36|Sequence|176|185|DDWLLRLMCG

>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDWLLRL 7
+DWLLRL
Sbjct: 524 NDWLLRL 530


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DDWLLRLM 8
D+WLLR++
Sbjct: 153 DNWLLRII 160


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DWLLRL 7
DWLLRL
Sbjct: 321 DWLLRL 326


>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 4 LLRLMCG 10
LLRL CG
Sbjct: 91 LLRLACG 97


>sp|HEM1_METAR|GLUTAMYL-TRNA reductase|Methanocella arvoryzae (strain DSM 22066

Query: 4 LLRLMCG 10
LLRL CG
Sbjct: 90 LLRLACG 96


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 DWLLRL 7
DWLLR+
Sbjct: 786 DWLLRV 791


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 2 DWLLRLMC 9
+W +RL+C
Sbjct: 222 EWPVRLLC 229


>sp|RNH2_METKA|RIBONUCLEASE HII|Methanopyrus kandleri (strain AV19 /

Query: 2 DWLLRLM 8
DW++RL+
Sbjct: 146 DWIVRLL 152


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 2 DWLLRLM 8
DW+LR++
Sbjct: 73 DWVLRIV 79




37|Sequence|181|190|RLMCGGVEIR

>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 RLMCGGVEIR 10
RL+ GG EIR
Sbjct: 230 RLLAGGAEIR 239


>sp|PUR7_PYRCJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RLMCGG 6
RL+CGG
Sbjct: 198 RLLCGG 203


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RLMCGGVEIR 10
R + GGVE+R
Sbjct: 326 RAIGGGVEVR 335


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LMCGGV 7
L+CGGV
Sbjct: 250 LLCGGV 255


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 LMCGGVEIR 10
LM GG+EI+
Sbjct: 204 LMDGGLEIK 212


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 MCGGVEIR 10
+ GG+E+R
Sbjct: 148 LAGGIEVR 155


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 LMCGGVEI 9
L+CGGV +
Sbjct: 250 LLCGGVAV 257


>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 3 MCGGV 7
MCGGV
Sbjct: 180 MCGGV 184




38|Sequence|186|195|GVEIRTIYAA

>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GVEIRTIYAA 10
G E++TIY+A
Sbjct: 71 GKEVKTIYSA 80


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVEIRTIYA 9
GVE++ +YA
Sbjct: 470 GVELKNVYA 478


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVEIRTIYAA 10
GVE+RT AA
Sbjct: 114 GVELRTAPAA 123


>sp|UPPS_METTH|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate

Query: 1 GVEIRTIYA 9
G+EI T YA
Sbjct: 69 GIEIVTAYA 77




39|Sequence|191|200|TIYAAHKQAK

>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TIYAAHKQ 8
TIY+A+K+
Sbjct: 76 TIYSAYKE 83


>sp|Y1516_METJA|UNCHARACTERIZED protein MJ1516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TIYAAHKQAK 10
+IY A+K AK
Sbjct: 75 SIYDAYKSAK 84




40|Sequence|196|205|HKQAKACLIS

>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HKQAKACLI 9
HK+ K C I
Sbjct: 256 HKEGKTCRI 264


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HKQAKAC 7
HKQ K C
Sbjct: 255 HKQNKTC 261


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HKQAKACLI 9
HK ACLI
Sbjct: 193 HKDEIACLI 201


>sp|RL1_AERPE|LARGE ribosomal subunit protein uL1|Aeropyrum pernix (strain ATCC

Query: 2 KQAKACLIS 10
K+AK C+++
Sbjct: 60 KEAKVCVVA 68




41|Sequence|201|210|ACLISRLSCE

***** No hits found ******


42|Sequence|206|215|RLSCERAGTR

>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SCERAGTR 10
+CER G R
Sbjct: 62 ACERVGIR 69


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SCERAGTR 10
+CER G R
Sbjct: 50 ACERVGIR 57


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC

Query: 1 RLSCERAGTR 10
R+ CER G +
Sbjct: 84 RMMCERVGCK 93


>sp|PYRH_THEAC|URIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LSCERAGTR 10
L CER+ TR
Sbjct: 126 LLCERSATR 134


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 1 RLSCERAGTR 10
R CER G R
Sbjct: 115 RTLCERFGVR 124


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 CERAGTR 10
CER GT+
Sbjct: 200 CERIGTQ 206


>sp|GRPE_METAC|PROTEIN GrpE|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RLSCERAG 8
R+ CE+AG
Sbjct: 148 RIKCEKAG 155


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SCERAGT 9
SC RAGT
Sbjct: 300 SCVRAGT 306


>sp|SERB_HALS3|PHOSPHOSERINE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RLSCERAGT 9
R +CE AGT
Sbjct: 146 RDACEAAGT 154




43|Sequence|211|220|RAGTRFNVRG

>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RAGTRFNVR 9
R GTR NVR
Sbjct: 231 RKGTRGNVR 239


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 2 AGTRFNVRG 10
AGTR VRG
Sbjct: 124 AGTRLVVRG 132


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGTRFNVR 9
AG R+N+R
Sbjct: 99 AGNRYNLR 106


>sp|Y645_METJA|UNCHARACTERIZED protein MJ0645|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AGTRFNVRG 10
+GTR+ VRG
Sbjct: 19 SGTRYIVRG 27


>sp|Y398_METJA|UNCHARACTERIZED protein MJ0398|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RAGTRFNVRG 10
+ GT N+RG
Sbjct: 214 KKGTESNIRG 223


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 1 RAGTRFNV 8
+AG RFN+
Sbjct: 299 KAGIRFNI 306




44|Sequence|216|225|FNVRGTNDDG

>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 4 RGTNDDG 10
RG NDDG
Sbjct: 407 RGANDDG 413


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 4 RGTNDDG 10
RG NDDG
Sbjct: 407 RGANDDG 413


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 2 NVRGTNDD 9
+VRGT DD
Sbjct: 21 SVRGTKDD 28


>sp|TRPD_THEAC|ANTHRANILATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 3 VRGTNDDG 10
+RG N+DG
Sbjct: 267 IRGENEDG 274


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 3 VRGTNDD 9
+RG NDD
Sbjct: 225 IRGYNDD 231


>sp|CCA_THEGJ|CCA-ADDING enzyme|Thermococcus gammatolerans (strain DSM 15229

Query: 2 NVRGTNDD 9
N+RG ND+
Sbjct: 149 NLRGRNDE 156


>sp|Y367_METJA|PROBABLE integrase/recombinase protein MJ0367|Methanocaldococcus jannaschii

Query: 1 FNVRGTNDD 9
FNVR +DD
Sbjct: 225 FNVRQGSDD 233


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 FNVRGTNDD 9
FNVRG D
Sbjct: 288 FNVRGVGKD 296


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FNVRGTNDD 9
FNVRG D
Sbjct: 289 FNVRGVGKD 297


>sp|SYT_METB6|THREONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 FNVRGTNDDG 10
FN++ DDG
Sbjct: 445 FNIKYFKDDG 454


>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 2 NVRGTNDD 9
N++G ND+
Sbjct: 148 NIKGKNDE 155


>sp|Y433_METTH|UPF0201 protein MTH_433|Methanothermobacter thermautotrophicus (strain

Query: 3 VRGTNDDG 10
VRGT D G
Sbjct: 39 VRGTGDSG 46


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 4 RGTNDDG 10
RG N+DG
Sbjct: 402 RGANEDG 408


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 3 VRGTNDDG 10
+ G NDDG
Sbjct: 685 ILGINDDG 692


>sp|GRPE_METTP|PROTEIN GrpE|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NVRGTNDDG 10
+V GT +DG
Sbjct: 9 SVEGTEEDG 17


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 VRGTNDDG 10
VRG ND G
Sbjct: 314 VRGLNDRG 321




45|Sequence|221|230|TNDDGHVANF

>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 TNDDGHV 7
T DDGH+
Sbjct: 273 TQDDGHI 279


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TNDDGHV 7
T DDGH+
Sbjct: 281 TQDDGHI 287


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 NDDGHVANF 10
N DG++ NF
Sbjct: 222 NIDGYIGNF 230


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 4 DGHVANF 10
DG+V NF
Sbjct: 226 DGYVGNF 232


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TNDDGH 6
T DDGH
Sbjct: 364 TQDDGH 369


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TNDDGH 6
T DDGH
Sbjct: 364 TQDDGH 369


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain ATCC

Query: 1 TNDDGHVANF 10
T +GH++NF
Sbjct: 93 TITNGHISNF 102


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 TNDDGHV 7
T+DDG+V
Sbjct: 166 THDDGYV 172




46|Sequence|226|235|HVANFVETEQ

>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri

Query: 1 HVANFVET 8
HVA++VET
Sbjct: 66 HVADYVET 73


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 2 VANFVETE 9
+ANF ETE
Sbjct: 346 IANFSETE 353


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 VANFVETE 9
VANFV+ E
Sbjct: 922 VANFVDEE 929


>sp|PMD_HALVD|PHOSPHOMEVALONATE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 HVANFVETEQ 10
HV + ETEQ
Sbjct: 179 HVPAYKETEQ 188




47|Sequence|231|240|VETEQVVYLD

>sp|UPP_HALLT|URACIL phosphoribosyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 VETEQVVY 8
VETEQV +
Sbjct: 27 VETEQVAF 34


>sp|UPP_HALMA|URACIL phosphoribosyltransferase|Haloarcula marismortui (strain ATCC

Query: 1 VETEQVVY 8
VETEQV +
Sbjct: 27 VETEQVAF 34


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 VETEQVVY 8
+ETEQV +
Sbjct: 27 IETEQVAF 34




48|Sequence|236|245|VVYLDDSVSS

>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VVYLDDSVSS 10
+VYLD++ S+
Sbjct: 20 IVYLDNAAST 29


>sp|SECY_METVA|PROTEIN translocase subunit SecY|Methanococcus vannielii

Query: 1 VVYLDDSVS 9
V+YLD+ VS
Sbjct: 153 VIYLDEIVS 161


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 1 VVYLDDSVS 9
VVY+ DS+S
Sbjct: 121 VVYVTDSIS 129


>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VVYLDDSVS 9
VVY+ DS+S
Sbjct: 121 VVYVTDSMS 129




49|Sequence|241|250|DSVSSFIQIR

>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 DSVSSFIQIR 10
D+V S IQIR
Sbjct: 847 DTVGSLIQIR 856


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SSFIQIR 10
SSFIQ+R
Sbjct: 122 SSFIQLR 128




50|Sequence|246|255|FIQIRGSVPL

>sp|RNH2_METLZ|RIBONUCLEASE HII|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FIQIRGSVPL 10
+I+ RG VPL
Sbjct: 178 YIRTRGEVPL 187


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 1 FIQIRGSVP 9
++ I+GSVP
Sbjct: 293 YVMIKGSVP 301


>sp|RS10_PYRAE|SMALL ribosomal subunit protein uS10|Pyrobaculum aerophilum (strain

Query: 2 IQIRGSVPL 10
+Q+RG +PL
Sbjct: 37 VQVRGPIPL 45


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 1 FIQIRGSVP 9
+I I+GSVP
Sbjct: 294 YILIKGSVP 302


>sp|RS10_PYRAR|SMALL ribosomal subunit protein uS10|Pyrobaculum arsenaticum (strain

Query: 2 IQIRGSVPL 10
+Q+RG +PL
Sbjct: 37 VQVRGPIPL 45


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 FIQIRGSVP 9
++ I+GSVP
Sbjct: 294 YVMIKGSVP 302


>sp|RS10_PYRNV|SMALL ribosomal subunit protein uS10|Pyrobaculum neutrophilum (strain

Query: 2 IQIRGSVPL 10
+Q+RG +PL
Sbjct: 37 VQVRGPIPL 45


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FIQIRGSVP 9
++ +RGSVP
Sbjct: 54 WLPVRGSVP 62


>sp|RS10_AERPE|SMALL ribosomal subunit protein uS10|Aeropyrum pernix (strain ATCC

Query: 2 IQIRGSVPL 10
I++RG VPL
Sbjct: 33 IRMRGPVPL 41


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 IRGSVPL 10
IRG VPL
Sbjct: 62 IRGDVPL 68


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 1 FIQIRGSVP 9
++ I+GSVP
Sbjct: 294 YVLIKGSVP 302


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 FIQIRGSVP 9
+I I+GSVP
Sbjct: 294 YILIKGSVP 302


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 1 FIQIRGSVP 9
++ I+GSVP
Sbjct: 294 YVLIKGSVP 302


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 2 IQIRGSVPL 10
+ I+GS+PL
Sbjct: 6 LDIKGSLPL 14


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 FIQIRGSVP 9
++ I+GSVP
Sbjct: 294 YVLIKGSVP 302


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 FIQIRGSVP 9
++ I+GSVP
Sbjct: 294 YVLIKGSVP 302


>sp|RS10_SACS2|SMALL ribosomal subunit protein uS10|Saccharolobus solfataricus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RS10_SACI7|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RS10_SACI6|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RS10_SACI4|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RS10_SACI3|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RS10_SACI2|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RS10_SACI1|SMALL ribosomal subunit protein uS10|Saccharolobus islandicus (strain

Query: 2 IQIRGSVPL 10
I++RG +PL
Sbjct: 33 IEMRGPIPL 41


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 FIQIRGSVP 9
++ I+GS+P
Sbjct: 290 YVLIKGSIP 298


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 1 FIQIRGSVP 9
F+ I+G++P
Sbjct: 303 FLMIQGTIP 311


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 FIQIRGSVP 9
++ I+GS+P
Sbjct: 294 YVVIKGSIP 302


>sp|RS10_SULAC|SMALL ribosomal subunit protein uS10|Sulfolobus acidocaldarius (strain

Query: 2 IQIRGSVPL 10
IQ+ G +PL
Sbjct: 33 IQVSGPIPL 41


>sp|RS10_PYRIL|SMALL ribosomal subunit protein uS10|Pyrobaculum islandicum (strain DSM

Query: 2 IQIRGSVPL 10
+Q++G +PL
Sbjct: 37 VQVKGPIPL 45


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 1 FIQIRGSVP 9
+I I+GSVP
Sbjct: 295 YILIQGSVP 303




51|Sequence|251|260|GSVPLFWEQP

>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSVPLFWEQP 10
GSV + WE+P
Sbjct: 259 GSVEIEWEEP 268


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 GSVPLFWEQP 10
G++PL W P
Sbjct: 241 GNIPLEWHPP 250


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 GSVPLFWEQP 10
G VPL W+ P
Sbjct: 231 GLVPLRWDDP 240


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VPLFWEQP 10
+PL WE P
Sbjct: 241 LPLRWEDP 248


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 SVPLFWEQ 9
SVP+ W+Q
Sbjct: 488 SVPVVWQQ 495


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 LFWEQP 10
L WEQP
Sbjct: 151 LSWEQP 156


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SVPLFWEQP 10
S PLF +QP
Sbjct: 298 SPPLFEDQP 306


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 SVPLFWE 8
S P FWE
Sbjct: 410 SYPRFWE 416


>sp|BACR_HALS4|BACTERIORHODOPSIN sp. (strain arg-4)

Query: 1 GSVPLFWE 8
G +PL+WE
Sbjct: 206 GILPLYWE 213


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 2 SVPLFWEQP 10
S PLF +QP
Sbjct: 297 SPPLFEDQP 305


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 2 SVPLFWEQP 10
S PLF +QP
Sbjct: 298 SPPLFEDQP 306


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 4 PLFWEQ 9
P+FW Q
Sbjct: 239 PVFWSQ 244


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VPLFWEQP 10
+PL W+ P
Sbjct: 233 IPLQWKDP 240


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VPLFWEQP 10
VP+F E+P
Sbjct: 16 VPVFHEEP 23




52|Sequence|256|265|FWEQPGLQVG

>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FWEQPGLQV 9
F+E+PG+++
Sbjct: 314 FYEEPGIEI 322


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 WEQPGLQVG 10
WE+ GL+VG
Sbjct: 8 WEEIGLRVG 16


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WEQPGLQVG 10
WE+ GL++G
Sbjct: 91 WEKIGLRIG 99


>sp|Y27B_METJA|UNCHARACTERIZED protein MJ0275.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WEQPGL 7
WE PGL
Sbjct: 110 WETPGL 115


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 2 WEQPGLQVG 10
WE+ GL++G
Sbjct: 3 WEKVGLKMG 11


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain

Query: 2 WEQPGLQVG 10
WE+ GL++G
Sbjct: 3 WEKLGLKMG 11


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WEQPGLQVG 10
WE+ G +VG
Sbjct: 94 WEKLGFKVG 102


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 2 WEQPGLQVG 10
W+ P +Q+G
Sbjct: 152 WDGPAVQLG 160


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WEQPGLQVG 10
W+ P +Q+G
Sbjct: 368 WDGPSVQLG 376


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 QPGLQVG 10
QPG+++G
Sbjct: 109 QPGIEIG 115


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 3 EQPGLQVG 10
E PG+Q+G
Sbjct: 337 EDPGIQMG 344


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 3 EQPGLQVG 10
E PG+Q+G
Sbjct: 337 EDPGIQMG 344


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 3 EQPGLQVG 10
E PG+Q+G
Sbjct: 337 EDPGIQMG 344


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WEQPGLQVG 10
WE+ GL+V
Sbjct: 91 WEELGLKVA 99


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 WEQPGLQVG 10
W PG +VG
Sbjct: 219 WAPPGRKVG 227




53|Sequence|261|270|GLQVGSHRVR

>sp|RL14_AERPE|LARGE ribosomal subunit protein uL14|Aeropyrum pernix (strain ATCC

Query: 1 GLQVGSH 7
GLQVGS+
Sbjct: 19 GLQVGSY 25


>sp|RL14_IGNH4|LARGE ribosomal subunit protein uL14|Ignicoccus hospitalis (strain

Query: 1 GLQVGSH 7
GLQVGS+
Sbjct: 16 GLQVGSY 22




54|Sequence|266|275|SHRVRMSRGF

>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HRVRMSRG 9
H +R SRG
Sbjct: 95 HEIRQSRG 102


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 HRVRMSRGF 10
H+V M +GF
Sbjct: 99 HQVMMEKGF 107


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 2 HRVRMSR 8
H++RMSR
Sbjct: 119 HKLRMSR 125




55|Sequence|271|280|MSRGFEANAP

>sp|Y875_PYRAE|PROTEIN PAE0875|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RGFEANAP 10
RGFE NAP
Sbjct: 215 RGFEVNAP 222


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GFEANAP 10
GFE NAP
Sbjct: 93 GFELNAP 99


>sp|PIMT2_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SRGFEANAP 10
S+G+E AP
Sbjct: 137 SKGYEKEAP 145


>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 SRGFEANAP 10
S+G+ NAP
Sbjct: 140 SKGYPPNAP 148


>sp|Y096_PYRAR|PROTEIN Pars_0096|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RGFEANAP 10
+GFE AP
Sbjct: 216 KGFEVGAP 223


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 MSRGFEANAP 10
+SR F+ N P
Sbjct: 217 ISRSFDVNRP 226




56|Sequence|276|285|EANAPAFDRH

>sp|NADM2_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PAFDRH 10
P FDRH
Sbjct: 121 PPFDRH 126


>sp|Y1126_METTH|UNCHARACTERIZED protein MTH_1126|Methanothermobacter thermautotrophicus (strain

Query: 1 EANAPAFDRH 10
EA P+F RH
Sbjct: 300 EAIPPSFSRH 309


>sp|RNP3_METAC|RIBONUCLEASE P protein component 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NAPAFDR 9
N PAFDR
Sbjct: 111 NHPAFDR 117


>sp|RS4_HALWD|SMALL ribosomal subunit protein uS4|Haloquadratum walsbyi (strain DSM

Query: 1 EANAPAFDRH 10
EANA AFD +
Sbjct: 150 EANAIAFDEN 159




57|Sequence|281|290|AFDRHFRTLK

>sp|NIFK_METTL|NITROGENASE molybdenum-iron protein beta chain|Methanothermococcus

Query: 1 AFDRHFR 7
AF+RHFR
Sbjct: 58 AFNRHFR 64


>sp|PGK_HALVA|PHOSPHOGLYCERATE kinase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 2 FDRHFRTLK 10
FDRH T+K
Sbjct: 37 FDRHAETVK 45


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DRHFRTLK 10
DR F+T+K
Sbjct: 320 DREFKTIK 327


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AFDRHFR 7
F RHFR
Sbjct: 315 GFSRHFR 321


>sp|G3PP_METTH|GLYCERALDEHYDE 3-phosphate phosphatase|Methanothermobacter thermautotrophicus

Query: 2 FDRHFRTL 9
+DRHF L
Sbjct: 58 YDRHFNVL 65


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDRHFRTLK 10
FD F TLK
Sbjct: 255 FDTKFNTLK 263


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 2 FDRHFR 7
FD HFR
Sbjct: 89 FDSHFR 94


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DRHFRT 8
D HFRT
Sbjct: 496 DNHFRT 501




58|Sequence|286|295|FRTLKNLYGK

>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 FRTLKNLYGK 10
F+T + LYGK
Sbjct: 225 FKTFQELYGK 234


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FRTLKNLYG 9
FRT ++LYG
Sbjct: 225 FRTFEDLYG 233


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 3 TLKNLYGK 10
T+KNL+GK
Sbjct: 233 TVKNLFGK 240


>sp|IPYR_METAC|INORGANIC pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FRTLKNLYGK 10
F T KNL GK
Sbjct: 130 FETYKNLEGK 139


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RTLKNLYG 9
+TLKN++G
Sbjct: 220 KTLKNIFG 227


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TLKNLYGK 10
TL+N+YG+
Sbjct: 25 TLENIYGQ 32


>sp|GATA_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 3 TLKNLYG 9
TLKN YG
Sbjct: 90 TLKNYYG 96


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 3 TLKNLYGK 10
TLK L+GK
Sbjct: 402 TLKELFGK 409


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LKNLYGK 10
L+NLYGK
Sbjct: 16 LENLYGK 22


>sp|SYW2_HALSA|TRYPTOPHAN--TRNA ligase 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 TLKNLYGK 10
TL+N+YG+
Sbjct: 168 TLQNVYGE 175


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 4 LKNLYGK 10
L+NLYGK
Sbjct: 16 LENLYGK 22


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LKNLYGK 10
L+NLYGK
Sbjct: 16 LENLYGK 22


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 4 LKNLYGK 10
L+NLYGK
Sbjct: 16 LENLYGK 22


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 2 RTLKNLY 8
RTLK LY
Sbjct: 140 RTLKELY 146


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 RTLKNLYG 9
RTL LYG
Sbjct: 175 RTLMELYG 182


>sp|OGG1_SULAC|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfolobus acidocaldarius (strain ATCC

Query: 5 KNLYGK 10
KNLYGK
Sbjct: 93 KNLYGK 98


>sp|Y1571_PYRHO|PUTATIVE transport protein PH1571|Pyrococcus horikoshii (strain ATCC

Query: 3 TLKNLY 8
TLKNLY
Sbjct: 85 TLKNLY 90


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RTLKNLYGK 10
RT+ N +GK
Sbjct: 53 RTIANFFGK 61


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 4 LKNLYGK 10
+KN+YGK
Sbjct: 249 IKNVYGK 255


>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 1 FRTLKNLYGK 10
+TLKN+Y +
Sbjct: 298 MQTLKNVYDR 307


>sp|SYW_METKA|TRYPTOPHAN--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 FRTLKNLYG 9
+ T+KN YG
Sbjct: 165 WNTVKNTYG 173


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RTLKNLYGK 10
RT+ N +GK
Sbjct: 562 RTIANFFGK 570




59|Sequence|291|300|NLYGKQIIVN

>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NLYGKQIIVN 10
NLYGK+I ++
Sbjct: 18 NLYGKKIAID 27


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 1 NLYGKQIIVN 10
NLYGK+I ++
Sbjct: 18 NLYGKKIAID 27


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLYGKQIIVN 10
NLYGK+I ++
Sbjct: 18 NLYGKKIAID 27


>sp|FEN_THEGJ|FLAP endonuclease 1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NLYGKQIIVN 10
NLYGK++ ++
Sbjct: 18 NLYGKKVAID 27


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 LYGKQIIVN 10
+YGK II+N
Sbjct: 168 VYGKDIILN 176


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NLYGKQIIV 9
N+YG +I+V
Sbjct: 69 NVYGSRIVV 77


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 YGKQIIV 9
YGK++IV
Sbjct: 50 YGKEVIV 56


>sp|IPYR_METAC|INORGANIC pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NLYGKQIIV 9
NL GK +IV
Sbjct: 135 NLEGKHVIV 143


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NLYGKQII 8
N YGK II
Sbjct: 131 NFYGKNII 138


>sp|FEN_THEKO|FLAP endonuclease 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NLYGKQIIVN 10
+LYGK++ ++
Sbjct: 18 SLYGKKVAID 27


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NLYGKQIIV 9
N YGK +I+
Sbjct: 399 NKYGKDVIL 407


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 2 LYGKQIIV 9
LYGK I+V
Sbjct: 49 LYGKIIVV 56




60|Sequence|296|305|QIIVNLLGSK

>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QIIVNLLGSK 10
++I+NLLGS+
Sbjct: 49 KVIMNLLGSR 58


>sp|IF1A2_METBF|TRANSLATION initiation factor 1A 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 IVNLLGSK 10
++NLLGSK
Sbjct: 43 VLNLLGSK 50


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 QIIVNLLGSK 10
+I++N++GS+
Sbjct: 392 EIVINVVGSE 401


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 3 IVNLLGSK 10
I+NL+G K
Sbjct: 266 IINLMGGK 273


>sp|FLUC_METMP|FLUORIDE-SPECIFIC ion channel FluC|Methanococcus maripaludis (strain DSM 14266

Query: 2 IIVNLLGS 9
+IVNLLGS
Sbjct: 36 LIVNLLGS 43


>sp|RS8_THEPD|SMALL ribosomal subunit protein uS8|Thermofilum pendens (strain DSM

Query: 1 QIIVNLLG 8
+I+VNLLG
Sbjct: 59 KIVVNLLG 66




61|Sequence|301|310|LLGSKEGEHM

>sp|FAEHP_METB6|BIFUNCTIONAL enzyme Fae/Hps|Methanoregula boonei (strain DSM 21154

Query: 1 LLGSKEG 7
LLGSKEG
Sbjct: 21 LLGSKEG 27


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLGSKEGEHM 10
++G +EG+H+
Sbjct: 199 VMGKREGDHI 208


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 LGSKEGEHM 10
L +KEGEH+
Sbjct: 66 LLAKEGEHI 74


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LGSKEGEHM 10
L +KEGEH+
Sbjct: 66 LLAKEGEHI 74


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LGSKEGEHM 10
L +KEGEH+
Sbjct: 66 LLAKEGEHI 74


>sp|RL4_THEVO|LARGE ribosomal subunit protein uL4|Thermoplasma volcanium (strain ATCC

Query: 1 LLGSKEGEHM 10
+L SKEG+H+
Sbjct: 171 ILRSKEGKHI 180


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LGSKEGEHM 10
L +KEGEH+
Sbjct: 67 LLAKEGEHI 75


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LGSKEGEHM 10
L +KEGEH+
Sbjct: 66 LLAKEGEHI 74


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LGSKEGEHM 10
L +KEGEH+
Sbjct: 66 LLAKEGEHI 74


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 4 SKEGEH 9
+KEGEH
Sbjct: 264 TKEGEH 269


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 GSKEGE 8
GSKEGE
Sbjct: 333 GSKEGE 338


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 KEGEHM 10
KEGEH+
Sbjct: 74 KEGEHI 79




62|Sequence|306|315|EGEHMLSKAF

>sp|MOBA_THESM|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus sibiricus

Query: 1 EGEHMLSKAF 10
+GE+ML KA
Sbjct: 147 KGEYMLGKAI 156




63|Sequence|311|320|LSKAFQSHLK

>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LSKAFQSHLK 10
L KA+++H+K
Sbjct: 147 LPKAYEAHIK 156


>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LSKAFQSHL 9
+SKAF +HL
Sbjct: 54 VSKAFITHL 62


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 KAFQSHLK 10
KA+++H+K
Sbjct: 150 KAYEAHIK 157


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 1 LSKAFQSHLK 10
L KA++ H+K
Sbjct: 330 LVKAYREHIK 339


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KAFQSHLK 10
KA+++H+K
Sbjct: 150 KAYEAHIK 157




64|Sequence|316|325|QSHLKASEHA

>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 1 QSHLKASEHA 10
Q HLKA E A
Sbjct: 46 QQHLKALETA 55


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain

Query: 1 QSHLKASEHA 10
Q HLKA E A
Sbjct: 46 QQHLKALETA 55


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 1 QSHLKASEHA 10
Q HLKA E A
Sbjct: 46 QQHLKALETA 55




65|Sequence|321|330|ASEHAADIQM

>sp|Y1363_THEON|UPF0282 protein TON_1363|Thermococcus onnurineus (strain NA1)

Query: 4 HAADIQM 10
HA+DIQM
Sbjct: 182 HASDIQM 188


>sp|Y379_THEGJ|UPF0282 protein TGAM_0379|Thermococcus gammatolerans (strain DSM 15229

Query: 4 HAADIQM 10
HA+DIQ+
Sbjct: 182 HASDIQL 188


>sp|Y1681_THEKO|UPF0282 protein TK1681|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HAADIQM 10
HA+DIQ+
Sbjct: 182 HASDIQL 188


>sp|AROD_METBU|3-DEHYDROQUINATE dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ASEHAADI 8
A+EH ADI
Sbjct: 30 AAEHGADI 37


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 4 HAADIQM 10
HA+DIQ+
Sbjct: 182 HASDIQL 188




66|Sequence|326|335|ADIQMVNFDY

>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ADIQMVNFD 9
ADI ++NF+
Sbjct: 357 ADIAIINFN 365


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 ADIQMVNFD 9
AD+Q +N D
Sbjct: 5083 ADLQSINID 5091


>sp|DTDA_META3|D-AMINOACYL-TRNA deacylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 IQMVNFDY 10
IQM +FDY
Sbjct: 225 IQMQDFDY 232


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IQMVNFDY 10
IQMV+++Y
Sbjct: 373 IQMVDYEY 380




67|Sequence|331|340|VNFDYHQMVK

>sp|QUEC_METB6|7-CYANO-7-DEAZAGUANINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 VNFDYHQMVK 10
+ FDYHQ K
Sbjct: 30 ITFDYHQKHK 39


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 DYHQMVK 10
DYHQ +K
Sbjct: 733 DYHQKIK 739


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 1 VNFDYHQMVK 10
+NFDY+++++
Sbjct: 1 MNFDYNKLLE 10


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 4 DYHQMVK 10
DYHQ +K
Sbjct: 20 DYHQRLK 26


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 NFDYHQMV 9
NF YHQ V
Sbjct: 738 NFIYHQRV 745


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 4 DYHQMVK 10
DY+Q+VK
Sbjct: 120 DYNQLVK 126


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 5 YHQMVK 10
YH+M+K
Sbjct: 74 YHEMIK 79


>sp|FOLD_THEAC|BIFUNCTIONAL protein FolD|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FDYHQMVK 10
FDY+++V+
Sbjct: 98 FDYYEIVR 105


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 2 NFDYHQMVK 10
++DYH++ K
Sbjct: 314 SYDYHKLGK 322


>sp|RL18_HALWD|LARGE ribosomal subunit protein uL18|Haloquadratum walsbyi (strain DSM

Query: 1 VNFDYHQMVK 10
V DYHQ ++
Sbjct: 17 VRTDYHQRLR 26


>sp|RL18_HALVD|LARGE ribosomal subunit protein uL18|Haloferax volcanii (strain ATCC

Query: 1 VNFDYHQMVK 10
V DYHQ ++
Sbjct: 17 VRTDYHQRLR 26


>sp|RL18_HALSA|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 1 VNFDYHQMVK 10
V DYHQ ++
Sbjct: 17 VRTDYHQRLR 26


>sp|RL18_HALS3|LARGE ribosomal subunit protein uL18|Halobacterium salinarum (strain

Query: 1 VNFDYHQMVK 10
V DYHQ ++
Sbjct: 17 VRTDYHQRLR 26


>sp|RL18_HALMT|LARGE ribosomal subunit protein uL18|Haloferax mediterranei (strain

Query: 1 VNFDYHQMVK 10
V DYHQ ++
Sbjct: 17 VRTDYHQRLR 26


>sp|RL18_HALLT|LARGE ribosomal subunit protein uL18|Halorubrum lacusprofundi (strain

Query: 1 VNFDYHQMVK 10
V DYHQ ++
Sbjct: 17 VRTDYHQRLR 26


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 VNFDYHQMVK 10
+N DY M+K
Sbjct: 404 INDDYMSMIK 413




68|Sequence|336|345|HQMVKGGKAE

>sp|TRPC_HALMA|INDOLE-3-GLYCEROL phosphate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HQMVKGGKA 9
QMV+GG A
Sbjct: 74 QQMVEGGAA 82


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VKGGKAE 10
VKGGK E
Sbjct: 119 VKGGKVE 125


>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 2 QMVKGGK 8
+MVKGGK
Sbjct: 579 EMVKGGK 585


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 QMVKGG 7
QMVKGG
Sbjct: 128 QMVKGG 133


>sp|RADA_NANEQ|DNA repair and recombination protein|Nanoarchaeum equitans (strain

Query: 1 HQMVKGGKAE 10
HQM+ KAE
Sbjct: 186 HQMLAARKAE 195


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 3 MVKGGKA 9
MV+GGKA
Sbjct: 9 MVEGGKA 15


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MVKGGKAE 10
++KGGK E
Sbjct: 354 IIKGGKGE 361




69|Sequence|341|350|GGKAEKLHSV

>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GKAEKLHS 9
G AE++HS
Sbjct: 54 GSAERMHS 61


>sp|CDC65_HALSA|ORC1-TYPE DNA replication protein 5|Halobacterium salinarum (strain ATCC

Query: 1 GGKAEKLHSV 10
G ++E+LH+V
Sbjct: 409 GTESERLHAV 418


>sp|HIS5_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 2 GKAEKLHS 9
GK +K+HS
Sbjct: 100 GKVDKIHS 107




70|Sequence|346|355|KLHSVLKPQV

>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HSVLKPQ 9
HS+++PQ
Sbjct: 486 HSIMRPQ 492


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 KLHSVLKPQV 10
K H V+KP V
Sbjct: 31 KYHEVVKPGV 40


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 KLHSVLKPQV 10
++HS+L P V
Sbjct: 13 EIHSILHPWV 22


>sp|PYRH_METLZ|URIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KLHSVLKPQ 9
K H +L PQ
Sbjct: 158 KRHDILSPQ 166


>sp|IF2A_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 LHSVLKPQ 9
+H+VLKP+
Sbjct: 64 IHAVLKPR 71




71|Sequence|351|360|LKPQVQKFLD

>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 KPQVQKFL 9
KP VQKF+
Sbjct: 63 KPPVQKFI 70


>sp|LRPA1_HALS3|HTH-TYPE transcriptional regulator LrpA1|Halobacterium salinarum (strain

Query: 2 KPQVQKFLD 10
KP V+K++D
Sbjct: 33 KPTVRKYID 41


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 4 QVQKFLD 10
Q+QKFLD
Sbjct: 267 QLQKFLD 273


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 LKPQVQKFLD 10
L+PQV+ +D
Sbjct: 399 LRPQVESIVD 408


>sp|SPEH_METM7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C7 /

Query: 3 PQVQKFL 9
P++QKFL
Sbjct: 94 PEIQKFL 100


>sp|SPEH_METM6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C6 /

Query: 3 PQVQKFL 9
P++QKFL
Sbjct: 94 PEIQKFL 100


>sp|SPEH_METM5|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C5 /

Query: 3 PQVQKFL 9
P++QKFL
Sbjct: 94 PEIQKFL 100


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LKPQVQKFLD 10
+KP+ KF D
Sbjct: 459 VKPEYDKFYD 468




72|Sequence|356|365|QKFLDYGFFY

>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FLDYGFF 9
+LDYGFF
Sbjct: 185 YLDYGFF 191


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FLDYGFFY 10
F+D+ +FY
Sbjct: 5 FVDFDYFY 12


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 1 QKFLDYGFF 9
Q+FL GF+
Sbjct: 418 QRFLKQGFY 426


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 1 QKFLDYG 7
+K+LDYG
Sbjct: 90 EKYLDYG 96


>sp|Y830_METJA|UNCHARACTERIZED protein MJ0830|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QKFLDYGF 8
+KF DYGF
Sbjct: 232 KKFKDYGF 239


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QKFLDY 6
QKF+DY
Sbjct: 197 QKFVDY 202


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 2 KFLDYGF 8
+FL YGF
Sbjct: 122 RFLGYGF 128


>sp|IPYR_METAC|INORGANIC pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 DYGFF 9
DYGFF
Sbjct: 48 DYGFF 52


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KFLDYGFFY 10
KFLDY FY
Sbjct: 239 KFLDYHPFY 247


>sp|DPCKG_PYRNV|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 QKFLDYG 7
+ FLDYG
Sbjct: 53 KNFLDYG 59


>sp|IPYR_METMA|INORGANIC pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 DYGFF 9
DYGFF
Sbjct: 45 DYGFF 49


>sp|ENO_PICTO|ENOLASE torridus (strain ATCC 700027

Query: 5 DYGFFY 10
D+GF+Y
Sbjct: 267 DHGFYY 272


>sp|RNZ_THEGJ|RIBONUCLEASE Z|Thermococcus gammatolerans (strain DSM 15229

Query: 1 QKFLDYGFF 9
Q FL+ GFF
Sbjct: 99 QNFLNSGFF 107


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 1 QKFLDYGFF 9
Q FL+ GFF
Sbjct: 99 QNFLNSGFF 107


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 QKFLDYG 7
QKF DYG
Sbjct: 147 QKFKDYG 153


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FLDYGFF 9
+LDY FF
Sbjct: 94 YLDYEFF 100


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KFLDYGF 8
+F+DYGF
Sbjct: 110 EFVDYGF 116


>sp|Y1626_PYRHO|MEMO1 family protein PH1626|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FLDYGFFY 10
F+ YG FY
Sbjct: 189 FMHYGSFY 196


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 3 FLDYGFFY 10
F+ YG FY
Sbjct: 189 FMHYGSFY 196


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 4 LDYGFFY 10
+DY FFY
Sbjct: 74 IDYDFFY 80




73|Sequence|361|370|YGFFYFNGSE

>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 YGFFYFNGSE 10
YG FYF E
Sbjct: 257 YGLFYFKARE 266


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGFFYFNGSE 10
YG FYF E
Sbjct: 258 YGLFYFKSQE 267


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 YGFFYFNGSE 10
+G+F NG+E
Sbjct: 148 FGYFIINGTE 157


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 157 GYFIINGSE 165


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 157 GYFIINGSE 165


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 156 GYFIVNGSE 164


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 148 GYFIVNGSE 156


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 150 GYFIVNGSE 158


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 150 GYFIVNGSE 158


>sp|RPO2N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanococcus vannielii (strain ATCC

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 148 GYFIVNGSE 156


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 2 GFFYFNGSE 10
G+F NGSE
Sbjct: 152 GYFIVNGSE 160


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 YGFFYF 6
YGF+YF
Sbjct: 534 YGFYYF 539


>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 1 YGFFYFNGSE 10
+GFFY SE
Sbjct: 302 HGFFYVPASE 311


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 YGFFYFNGS 9
YGF +F G+
Sbjct: 401 YGFTFFTGA 409


>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 YGFFYFNG 8
YGF F G
Sbjct: 212 YGFLVFEG 219


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 GFFYFNGSE 10
GF +F GSE
Sbjct: 74 GFRHFMGSE 82


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GFFYFNGSE 10
G YFNGS+
Sbjct: 339 GKIYFNGSK 347


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 1 YGFFYFNGS 9
Y +YFNGS
Sbjct: 184 YSAYYFNGS 192


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 YGFFYFNGSE 10
+G+F +NG +
Sbjct: 533 HGYFLYNGKK 542


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YGFFYFNGS 9
YG+ FNG+
Sbjct: 344 YGYENFNGN 352


>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFFYFNGS 9
GF YF+G+
Sbjct: 89 GFIYFSGT 96


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 2 GFFYFNG 8
G FY+NG
Sbjct: 7 GNFYYNG 13


>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 FYFNGSE 10
YFNG+E
Sbjct: 60 IYFNGTE 66


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 2 GFFYFNG 8
GF YF+G
Sbjct: 35 GFIYFDG 41


>sp|AMT1_ARCFU|AMMONIUM transporter Amt1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGFFYFNG 8
+G+F FNG
Sbjct: 199 FGWFGFNG 206




74|Sequence|366|375|FNGSEVQRCQ

>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 NGSEVQRCQ 10
NG+EV RC+
Sbjct: 116 NGAEVLRCE 124




75|Sequence|371|380|VQRCQSGTVR

>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 3 RCQSGT 8
RCQSGT
Sbjct: 157 RCQSGT 162


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 2 QRCQSGTVR 10
Q CQ GT R
Sbjct: 228 QMCQQGTYR 236


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 3 RCQSGT 8
+CQSGT
Sbjct: 157 KCQSGT 162


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 3 RCQSGT 8
+CQSGT
Sbjct: 157 KCQSGT 162


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 3 RCQSGT 8
+CQSGT
Sbjct: 157 KCQSGT 162


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 3 RCQSGT 8
+CQSGT
Sbjct: 157 KCQSGT 162


>sp|TRUB_HALSA|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain ATCC

Query: 3 RCQSGT 8
RC+SGT
Sbjct: 144 RCESGT 149


>sp|TRUB_HALS3|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain ATCC

Query: 3 RCQSGT 8
RC+SGT
Sbjct: 144 RCESGT 149


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 3 RCQSGT 8
+CQSGT
Sbjct: 172 KCQSGT 177




76|Sequence|376|385|SGTVRTNCLD

>sp|RS19_ARCFU|SMALL ribosomal subunit protein uS19|Archaeoglobus fulgidus (strain

Query: 2 GTVRTNCLD 10
GT RT+C D
Sbjct: 62 GTARTHCRD 70


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGTVRTNCLD 10
SG +RT+C D
Sbjct: 258 SGEMRTDCGD 267


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain

Query: 3 TVRTNCLD 10
T+RT+C D
Sbjct: 92 TIRTHCRD 99


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 2 GTVRTNC 8
GT+R NC
Sbjct: 87 GTLRINC 93




77|Sequence|381|390|TNCLDCLDRT

>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CLDCLD 8
CLDCLD
Sbjct: 236 CLDCLD 241


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CLDCLDR 9
C DCL+R
Sbjct: 96 CEDCLER 102


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CLDCLDR 9
CL C DR
Sbjct: 374 CLSCTDR 380


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CLDCLD 8
CLDC D
Sbjct: 167 CLDCYD 172


>sp|MTM5_METJA|TYPE II methyltransferase M.MjaV|Methanocaldococcus jannaschii (strain

Query: 3 CLDCLD 8
C+DCL+
Sbjct: 8 CMDCLE 13


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TNCLDC 6
T CLDC
Sbjct: 1115 TRCLDC 1120


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CLDCLD 8
C++CLD
Sbjct: 236 CMECLD 241


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TNCLDC 6
T CLDC
Sbjct: 2206 TRCLDC 2211


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 TNCLDC 6
T CLDC
Sbjct: 1287 TRCLDC 1292


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 TNCLDCLD 8
T C +C+D
Sbjct: 88 TQCKECMD 95


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NCLDCLDRT 10
+C CL+RT
Sbjct: 194 SCGTCLERT 202


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 2 NCLDCLDR 9
NC DCL R
Sbjct: 236 NCEDCLWR 243


>sp|PURO_METJA|IMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCLDCLDRT 10
NC+ +D+T
Sbjct: 60 NCIKVIDKT 68


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 2 NCLDCLDR 9
NC DC R
Sbjct: 72 NCYDCQKR 79


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCLDCL 7
NC DCL
Sbjct: 191 NCGDCL 196


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 2 NCLDCLDR 9
+C DCL R
Sbjct: 246 HCEDCLTR 253




78|Sequence|386|395|CLDRTNSVQA

>sp|MFNB_METBF|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DRTNSVQ 9
DRTNS++
Sbjct: 215 DRTNSIR 221




79|Sequence|391|400|NSVQAFLGLE

>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NSVQAFLGLE 10
S++AF GLE
Sbjct: 50 ESLEAFSGLE 59




80|Sequence|396|405|FLGLEMLAKQ

***** No hits found ******


81|Sequence|401|410|MLAKQLEALG

>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 AKQLEALG 10
A+QLEALG
Sbjct: 71 AEQLEALG 78


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 AKQLEALG 10
A+QLEALG
Sbjct: 71 AEQLEALG 78


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 3 AKQLEALG 10
A+QLEA+G
Sbjct: 72 AEQLEAIG 79


>sp|CAS2_HYPBU|CRISPR-ASSOCIATED endoribonuclease Cas2|Hyperthermus butylicus (strain DSM 5456

Query: 1 MLAKQLEALG 10
+LAK L++LG
Sbjct: 18 LLAKTLQSLG 27


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 2 LAKQLEALG 10
+AKQL+ LG
Sbjct: 34 IAKQLDKLG 42


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LAKQLEALG 10
+ KQL+ALG
Sbjct: 329 VGKQLKALG 337


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 MLAKQLEALG 10
M+A+QL LG
Sbjct: 45 MIARQLAKLG 54


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 2 LAKQLEALG 10
LAK L ALG
Sbjct: 63 LAKALSALG 71


>sp|PELO_METTH|PROTEIN pelota homolog|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 AKQLEALG 10
KQLE+LG
Sbjct: 335 GKQLESLG 342




82|Sequence|406|415|LEALGLAEKP

>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEALGLAEKP 10
L++LGLAE+P
Sbjct: 347 LKSLGLAEEP 356


>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LEALGLAEKP 10
+E GLAEKP
Sbjct: 32 IEGYGLAEKP 41


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 2 EALGLAEKP 10
EAL LAE+P
Sbjct: 14 EALILAERP 22


>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum (strain

Query: 1 LEALGLAEK 9
E LGLAE+
Sbjct: 98 FETLGLAER 106


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LEALGLAEK 9
LEALGLA K
Sbjct: 211 LEALGLAVK 219


>sp|PANB_CALMQ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 EALGLAEKP 10
+ +GL+EKP
Sbjct: 219 DVIGLSEKP 227


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LEALGLAEKP 10
L LG+A KP
Sbjct: 71 LNELGIAPKP 80


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LEALGLAEKP 10
L LG+A KP
Sbjct: 71 LNELGIAPKP 80


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LEALGLAEKP 10
+E+LG++E P
Sbjct: 190 VESLGVSEPP 199


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEALGLAEK 9
L A+G+AEK
Sbjct: 134 LRAIGIAEK 142


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LEALGLAEKP 10
+EA+G E P
Sbjct: 203 IEAIGFGEDP 212


>sp|RL15_ARCFU|LARGE ribosomal subunit protein uL15|Archaeoglobus fulgidus (strain ATCC

Query: 1 LEALGLAEK 9
L +LGLAEK
Sbjct: 119 LASLGLAEK 127


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEALGLAEK 9
LE LG++EK
Sbjct: 51 LELLGISEK 59


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EALGLAEKP 10
+ +GL+EKP
Sbjct: 219 DIIGLSEKP 227


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEALGLAEKP 10
L+ALG+ KP
Sbjct: 339 LKALGVESKP 348


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEALGLAE 8
+EA+GLAE
Sbjct: 280 IEAVGLAE 287




83|Sequence|411|420|LAEKPQLVTR

>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 EKPQLV 8
EKPQLV
Sbjct: 164 EKPQLV 169


>sp|Y933_METJA|UNCHARACTERIZED membrane protein MJ0933|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EKPQLVT 9
EKP+L+T
Sbjct: 139 EKPRLIT 145


>sp|TPIS_SULTO|TRIOSEPHOSPHATE isomerase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 EKPQLVTR 10
EKP+++TR
Sbjct: 155 EKPEVITR 162


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 LAEKPQLVT 9
LAE+P+L T
Sbjct: 550 LAEEPELST 558


>sp|RL1_STAMF|LARGE ribosomal subunit protein uL1|Staphylothermus marinus (strain ATCC

Query: 3 EKPQLVTR 10
++PQL+TR
Sbjct: 158 DQPQLMTR 165




84|Sequence|416|425|QLVTRFQEVF

***** No hits found ******


85|Sequence|421|430|FQEVFRSMWS

>sp|RPO6_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus islandicus (strain

Query: 1 FQEVFRSMW 9
F EVF S+W
Sbjct: 15 FNEVFVSLW 23


>sp|RPO6_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus islandicus (strain

Query: 1 FQEVFRSMW 9
F EVF S+W
Sbjct: 15 FNEVFVSLW 23


>sp|RPO6_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus islandicus (strain

Query: 1 FQEVFRSMW 9
F EVF S+W
Sbjct: 15 FNEVFVSLW 23


>sp|RPO6_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus shibatae (strain ATCC

Query: 1 FQEVFRSMW 9
F EVF S+W
Sbjct: 15 FNEVFVSLW 23


>sp|RPO6_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo6|Saccharolobus solfataricus (strain

Query: 1 FQEVFRSMW 9
F EVF S+W
Sbjct: 15 FNEVFISLW 23


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 FQEVFR 6
FQEVFR
Sbjct: 743 FQEVFR 748


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FQEVFR 6
FQEVFR
Sbjct: 796 FQEVFR 801


>sp|AGL13_HALVD|PROBABLE low-salt glycan biosynthesis epimerase|Haloferax volcanii (strain

Query: 3 EVFRSMW 9
EVFRS W
Sbjct: 24 EVFRSDW 30


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FQEVFRSMW 9
F+E +R +W
Sbjct: 118 FEEAWREVW 126


>sp|RKD4_PYRCJ|ARCADIN-4 calidifontis (strain DSM 21063

Query: 1 FQEVFRSMW 9
F EVF+S++
Sbjct: 655 FNEVFQSLY 663


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 4 VFRSMW 9
VFRS W
Sbjct: 229 VFRSFW 234




86|Sequence|426|435|RSMWSVNGDS

>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RSMWSVNG 8
R++W +NG
Sbjct: 204 RNIWGING 211


>sp|PDXT_SACI7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 4 WSVNGD 9
WS+NG+
Sbjct: 26 WSINGE 31


>sp|PDXT_SACI2|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 4 WSVNGD 9
WS+NG+
Sbjct: 26 WSINGE 31


>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus

Query: 4 WSVNGD 9
WS+NG+
Sbjct: 26 WSINGE 31


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RSMWSVNGD 9
+++W+VNG+
Sbjct: 84 QTVWTVNGE 92


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 MWSVNGD 9
+WSVN D
Sbjct: 75 LWSVNYD 81


>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 WSVNGDS 10
W V GDS
Sbjct: 65 WGVRGDS 71


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SMWSVNGDS 10
S W + GDS
Sbjct: 63 SWWGIRGDS 71


>sp|Y1219_METJA|UNCHARACTERIZED protein MJ1219|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SMWSVNG 8
++WS+NG
Sbjct: 44 ALWSLNG 50




87|Sequence|431|440|VNGDSISKIY

>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 1 VNGDSISKIY 10
VNGD++ K+Y
Sbjct: 272 VNGDTLKKLY 281


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 VNGDSISKIY 10
+ GD + KIY
Sbjct: 359 ITGDEVEKIY 368


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GDSISKIY 10
GD+I+KIY
Sbjct: 106 GDAIAKIY 113


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 VNGDSISKIY 10
+N D IS IY
Sbjct: 203 LNSDEISSIY 212


>sp|MTNA_METJA|PUTATIVE methylthioribose-1-phosphate isomerase|Methanocaldococcus

Query: 1 VNGDSISKIY 10
+NGD I K Y
Sbjct: 68 INGDDIYKAY 77


>sp|Y939_AERPE|UPF0248 protein APE_0939|Aeropyrum pernix (strain ATCC 700893

Query: 1 VNGDSI 6
VNGDSI
Sbjct: 60 VNGDSI 65


>sp|RLME_NATPD|RIBOSOMAL RNA large subunit methyltransferase|Natronomonas pharaonis (strain

Query: 2 NGDSISKIY 10
NGD ++K++
Sbjct: 141 NGDLVAKVF 149


>sp|ARGB_METM7|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 103 INGDIVSKL 111


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 103 INGDIVSKL 111


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 NGDSISK 8
NGD ISK
Sbjct: 156 NGDEISK 162


>sp|ARGB_METMP|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 103 INGDIVSKL 111


>sp|ARGB_METM5|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 103 INGDIVSKL 111


>sp|ARGB_METJA|ACETYLGLUTAMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 108 INGDIVSKL 116


>sp|ARGB_METVS|ACETYLGLUTAMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 103 INGDIVSKL 111


>sp|RS4E_HALLT|SMALL ribosomal subunit protein eS4|Halorubrum lacusprofundi (strain

Query: 1 VNGDSIS 7
VNGD+IS
Sbjct: 67 VNGDAIS 73


>sp|ARGB_META3|ACETYLGLUTAMATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VNGDSISKI 9
+NGD +SK+
Sbjct: 103 INGDIVSKL 111




88|Sequence|436|445|ISKIYAGTGA

>sp|TPIS_THEAC|TRIOSEPHOSPHATE isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ISKIYAGTG 9
I KIY GTG
Sbjct: 159 IVKIYEGTG 167


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ISKIYAGT 8
ISK+Y GT
Sbjct: 4 ISKLYCGT 11


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain

Query: 4 IYAGTGA 10
IYAG GA
Sbjct: 55 IYAGKGA 61


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ISKIYAGTG 9
IS+IY G G
Sbjct: 278 ISRIYEGMG 286


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 SKIYAGTG 9
SK Y+GTG
Sbjct: 658 SKFYSGTG 665


>sp|KDAD_SACS2|2-DEHYDRO-3-DEOXY-D-ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SKIYAGTGA 10
SKIYAG A
Sbjct: 186 SKIYAGCCA 194


>sp|PYRI_HALSA|ASPARTATE carbamoyltransferase regulatory chain|Halobacterium salinarum

Query: 1 ISKIYAGT 8
+SKI AGT
Sbjct: 9 VSKIQAGT 16


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 1 ISKIYAGTGA 10
I ++AGTGA
Sbjct: 410 IPLVFAGTGA 419




89|Sequence|441|450|AGTGALEGKA

>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 3 TGALEGKA 10
TG LEG+A
Sbjct: 214 TGELEGRA 221


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGTGALEG 8
AG GAL+G
Sbjct: 214 AGIGALKG 221




90|Sequence|446|455|LEGKAKLKDG

>sp|EPPA_METMP|PREPILIN peptidase EppA|Methanococcus maripaludis (strain DSM 14266

Query: 1 LEGKAKLKDG 10
LEGK+ + DG
Sbjct: 281 LEGKSLMTDG 290


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain ATCC

Query: 1 LEGKAKLKD 9
+EGKA LKD
Sbjct: 100 VEGKASLKD 108


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus furiosus

Query: 1 LEGKAKLKD 9
LEG+ KL+D
Sbjct: 182 LEGRLKLED 190


>sp|RL30_METMA|LARGE ribosomal subunit protein uL30|Methanosarcina mazei (strain ATCC

Query: 1 LEGKAKLKD 9
+EGKA LKD
Sbjct: 100 VEGKASLKD 108


>sp|RL30_METAC|LARGE ribosomal subunit protein uL30|Methanosarcina acetivorans (strain

Query: 1 LEGKAKLKD 9
+EGK+ LKD
Sbjct: 100 IEGKSSLKD 108


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LEGKAKLKDG 10
++GK LKDG
Sbjct: 390 IDGKLTLKDG 399


>sp|ILVD_PYRIL|DIHYDROXY-ACID dehydratase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LEGKAKLKDG 10
EGKAK+ +G
Sbjct: 405 FEGKAKVYNG 414


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EGKAKLKDG 10
EGK +LK+G
Sbjct: 63 EGKRRLKEG 71


>sp|SYFA_SULAC|PHENYLALANINE--TRNA ligase alpha subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EGKAKLKDG 10
EGK +LK+G
Sbjct: 63 EGKKRLKEG 71


>sp|RL30_METAR|LARGE ribosomal subunit protein uL30|Methanocella arvoryzae (strain DSM

Query: 2 EGKAKLKD 9
EGKAKL D
Sbjct: 101 EGKAKLGD 108


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEGKAKLKDG 10
+EG A L DG
Sbjct: 236 IEGGAALSDG 245




91|Sequence|451|460|KLKDGARSVT

>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 1 KLKDGAR 7
KLKDGAR
Sbjct: 232 KLKDGAR 238


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 1 KLKDGAR 7
KLKDGAR
Sbjct: 235 KLKDGAR 241


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 1 KLKDGAR 7
KLKDGA+
Sbjct: 234 KLKDGAK 240


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLKDGARSV 9
K+KDG+ S+
Sbjct: 521 KIKDGSHSI 529


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 2 LKDGARSVT 10
L+DG+RS T
Sbjct: 266 LRDGSRSGT 274




92|Sequence|456|465|ARSVTRTIQN

***** No hits found ******


93|Sequence|461|470|RTIQNNFFDS

>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 RTIQNNFFD 9
R + NNF+D
Sbjct: 438 RNVMNNFYD 446


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 RTIQNNFFD 9
R + NNF+D
Sbjct: 434 RNVMNNFYD 442


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RTIQNNFFD 9
+TI NN+F+
Sbjct: 692 KTIVNNYFN 700


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RTIQNNFFD 9
+TI NN+F+
Sbjct: 692 KTIVNNYFN 700


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RTIQNNFFD 9
+TI NN+F+
Sbjct: 692 KTIVNNYFN 700


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 1 RTIQNNFFD 9
+TI NN+F+
Sbjct: 692 KTIVNNYFN 700


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RTIQNNFFD 9
+TI NN+F+
Sbjct: 692 KTIVNNYFN 700


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RTIQNNFFD 9
+TI NN+F+
Sbjct: 692 KTIVNNYFN 700


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 TIQNNFFDS 10
TIQN FDS
Sbjct: 202 TIQNATFDS 210


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 TIQNNFFDS 10
TIQN FDS
Sbjct: 202 TIQNATFDS 210


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 RTIQNNFFD 9
RT+ N FD
Sbjct: 46 RTLSNTIFD 54


>sp|GLMU_METM7|BIFUNCTIONAL protein GlmU|Methanococcus maripaludis (strain C7 /

Query: 3 IQNNFFD 9
+QNN FD
Sbjct: 164 LQNNVFD 170


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 IQNNFFD 9
++NN+FD
Sbjct: 193 LKNNYFD 199


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 TIQNNFFDS 10
T+ NN+F+S
Sbjct: 447 TLANNYFNS 455




94|Sequence|466|475|NFFDSSKQEA

>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NFFDSSK 7
NFF SSK
Sbjct: 240 NFFQSSK 246




95|Sequence|471|480|SKQEAIDVLL

>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SKQEAIDVL 9
S+Q AIDVL
Sbjct: 393 SRQTAIDVL 401


>sp|HTAXP_HALS3|HEAT repeat-containing taxis protein OE_2401F|Halobacterium salinarum

Query: 1 SKQEAIDVLL 10
++QEA+D L+
Sbjct: 70 TQQEAVDALM 79


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 SKQEAIDVLL 10
SKQ ++DV L
Sbjct: 1083 SKQSSLDVFL 1092


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 SKQEAIDVL 9
S QEA+DV+
Sbjct: 93 SYQEAVDVM 101


>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SKQEAIDVL 9
S QEA+DV+
Sbjct: 93 SYQEAVDVM 101


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 SKQEAIDVL 9
SKQEA++++
Sbjct: 964 SKQEAVNMI 972


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM

Query: 1 SKQEAIDVLL 10
+KQEA DV++
Sbjct: 25 AKQEAPDVIV 34


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 SKQEAIDVLL 10
+K+E IDV+L
Sbjct: 65 TKEEMIDVVL 74


>sp|MFNB_METM6|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 SKQEAIDVL 9
S QEA+DV+
Sbjct: 93 SYQEALDVM 101


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SKQEAIDVL 9
S QEA+DV+
Sbjct: 93 SYQEALDVM 101




96|Sequence|476|485|IDVLLLGNTL

>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DVLLLGNTL 10
DVL LGNTL
Sbjct: 167 DVLHLGNTL 175


>sp|IPYR_SACS2|INORGANIC pyrophosphatase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDVLLLGN 8
+DVL+LGN
Sbjct: 66 LDVLVLGN 73


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 1 IDVLLLGN 8
+DV++LGN
Sbjct: 207 VDVMMLGN 214


>sp|PANB_AERPE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IDVLLLGNTL 10
+DV+L+G++L
Sbjct: 39 VDVILVGDSL 48


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IDVLLLGNTL 10
IDVL GN L
Sbjct: 229 IDVLFAGNAL 238


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 1 IDVLLLGNTL 10
+DVLL+G+++
Sbjct: 34 VDVLLVGDSV 43


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IDVLLLGNT 9
IDVLL+G++
Sbjct: 37 IDVLLVGDS 45


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 IDVLLLGN 8
IDV +LGN
Sbjct: 255 IDVRMLGN 262


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDVLLLGNTL 10
IDV++LG+ L
Sbjct: 29 IDVIVLGSDL 38


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDVLLLGNTL 10
+D+LL GN L
Sbjct: 226 VDLLLSGNAL 235


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 1 IDVLLLGNTL 10
+DV+L+G+++
Sbjct: 35 VDVILVGDSM 44


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IDVLLLGNTL 10
++ LLL NTL
Sbjct: 68 VEALLLENTL 77


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 DVLLLGNTL 10
DVLL+G +L
Sbjct: 45 DVLLIGGSL 53


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IDVLLLGN 8
ID++LLG+
Sbjct: 161 IDIMLLGH 168




97|Sequence|481|490|LGNTLNSDLA

>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGNTLNSDL 9
L NT+NSDL
Sbjct: 378 LVNTVNSDL 386


>sp|Y476_PYRFU|PROTEIN PF0476|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GNTLNSDLA 10
GNT+NS+ A
Sbjct: 15 GNTVNSNSA 23


>sp|ARLY_METJA|ARGININOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGNTLNSDLA 10
LGN++ D+A
Sbjct: 9 LGNSIKEDVA 18


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGNTLNSDLA 10
+GN ++ DLA
Sbjct: 268 IGNLISDDLA 277




98|Sequence|486|495|NSDLADKARA

>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 3 DLADKARA 10
DLA+KARA
Sbjct: 319 DLAEKARA 326


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 NSDLADKA 8
NS+LAD+A
Sbjct: 247 NSELADRA 254


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain

Query: 2 SDLADKARA 10
SDLAD+ A
Sbjct: 45 SDLADRVEA 53


>sp|RL24_PYRCJ|LARGE ribosomal subunit protein uL24|Pyrobaculum calidifontis (strain DSM

Query: 3 DLADKAR 9
DL+DKAR
Sbjct: 107 DLSDKAR 113




99|Sequence|491|500|DKARALLTTG

>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 DKARALLT 8
DKARAL+T
Sbjct: 471 DKARALVT 478


>sp|Y709_METMP|PROBABLE minor pilin MMP0709|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKARALLTTG 10
DKA LTTG
Sbjct: 60 DKALVKLTTG 69




100|Sequence|496|505|LLTTGSLRVS

***** No hits found ******


101|Sequence|501|510|SLRVSEQTLQ

***** No hits found ******


102|Sequence|506|515|EQTLQSASSK

***** No hits found ******


103|Sequence|511|520|SASSKVLKSM

>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SASSKVLK 8
SASSK++K
Sbjct: 198 SASSKIIK 205




104|Sequence|516|525|VLKSMCENFY

>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VLKSMCE 7
VLKS+CE
Sbjct: 638 VLKSLCE 644


>sp|CSM5_METJA|CRISPR system Cms protein Csm5|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLKSMCENF 9
+LK++C NF
Sbjct: 291 ILKNLCNNF 299


>sp|SYFB_METAR|PHENYLALANINE--TRNA ligase beta subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LKSMCENF 9
L+S+C NF
Sbjct: 484 LQSLCANF 491


>sp|PYLD_METAC|PYRROLYSINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LKSMCENFY 10
+K +C++FY
Sbjct: 31 IKGVCKDFY 39


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLKSMCENFY 10
VLK M EN Y
Sbjct: 218 VLKVMAENNY 227


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VLKSMCE----NFY 10
+LK+MCE +FY
Sbjct: 262 MLKAMCEGQNVDFY 275


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 3 KSMCENFY 10
+++C NFY
Sbjct: 5 RAICGNFY 12


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKSMCENFY 10
+K++C++FY
Sbjct: 718 VKAVCDDFY 726


>sp|SRP19_META3|SIGNAL recognition particle 19 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 VLKSMCENF 9
+LK +CEN
Sbjct: 80 ILKKICENL 88


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 2 LKSM--CENFY 10
L+SM CEN+Y
Sbjct: 188 LRSMTGCENYY 198


>sp|RNH2_PICTO|RIBONUCLEASE HII|Picrophilus torridus (strain ATCC 700027

Query: 1 VLKSMCENFY 10
+LK+ CE Y
Sbjct: 86 ILKAECEKIY 95


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VLKSMCENF 9
++KS+ ENF
Sbjct: 245 LMKSLIENF 253


>sp|T1S1_METJA|TYPE I restriction enzyme MjaVII|Methanocaldococcus jannaschii (strain

Query: 3 KSMCENF 9
KSM ENF
Sbjct: 365 KSMLENF 371




105|Sequence|521|530|CENFYKYSKP

>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 2 ENFYKYSKP 10
+NF KY KP
Sbjct: 125 KNFLKYIKP 133


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ENFYKYSKP 10
+NF KY KP
Sbjct: 125 KNFLKYIKP 133


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 ENFYKYSKP 10
+NF KY KP
Sbjct: 125 KNFLKYIKP 133


>sp|HEM3_SACI1|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 2 ENFYKYSKP 10
+NF KY KP
Sbjct: 125 KNFLKYIKP 133


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 2 ENFYKYSKP 10
+NF KY KP
Sbjct: 125 KNFLKYIKP 133


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 2 ENFYKYSKP 10
+NF KY KP
Sbjct: 125 KNFLKYIKP 133


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ENFYKYSKP 10
E FY++S+P
Sbjct: 428 ETFYEFSEP 436


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 ENFYKYSKP 10
E+F +Y KP
Sbjct: 258 ESFVRYQKP 266


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ENFYKYSKP 10
E FY++S+P
Sbjct: 428 ETFYEFSEP 436


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 ENFYKYSKP 10
E FYK KP
Sbjct: 817 EPFYKAEKP 825


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 YKYSKP 10
Y+YSKP
Sbjct: 378 YEYSKP 383


>sp|HEM3_SACS2|PROBABLE porphobilinogen deaminase|Saccharolobus solfataricus (strain ATCC

Query: 2 ENFYKYSKP 10
+NF KY +P
Sbjct: 125 KNFIKYIRP 133


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ENFYKYSKP 10
E FY++S+P
Sbjct: 428 ETFYEFSEP 436


>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ENFYKYSKP 10
+ FYKY P
Sbjct: 267 QAFYKYKTP 275


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ENFYKYSK 9
EN+ KY+K
Sbjct: 510 ENYIKYAK 517


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ENFYKYSKP 10
E FY++S+P
Sbjct: 428 EVFYEFSEP 436


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 ENFYKYSK 9
E+FYK+ K
Sbjct: 212 EDFYKFLK 219


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ENFYKYSK 9
E+FYK+ K
Sbjct: 212 EDFYKFLK 219


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 2 ENFYKYSKP 10
EN YK S P
Sbjct: 232 ENTYKASSP 240


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 2 ENFYKYSKP 10
EN YK S P
Sbjct: 232 ENTYKASSP 240


>sp|IF1A_SULTO|TRANSLATION initiation factor 1A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CENFYKYSK 9
C+ YKYS+
Sbjct: 78 CDIIYKYSE 86


>sp|RLME_PICTO|RIBOSOMAL RNA large subunit methyltransferase|Picrophilus torridus (strain

Query: 3 NFYKYSKP 10
N+YK +KP
Sbjct: 169 NYYKITKP 176


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 2 ENFYKYS 8
+NFY YS
Sbjct: 44 DNFYVYS 50


>sp|Y1658_METJA|UNCHARACTERIZED protein MJ1658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CENFYKYSKP 10
C Y++ KP
Sbjct: 101 CREEYRFKKP 110


>sp|Y670_METJA|UNCHARACTERIZED protein MJ0670|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ENFYKYSKP 10
E YK++KP
Sbjct: 71 EAIYKFAKP 79




106|Sequence|526|535|KYSKPKKIRV

>sp|RL4_HALLT|LARGE ribosomal subunit protein uL4|Halorubrum lacusprofundi (strain ATCC

Query: 1 KYSKPKKIRV 10
KYS+PK + V
Sbjct: 187 KYSQPKSVLV 196


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 KYSKPKKIRV 10
KYS P+K+R+
Sbjct: 337 KYSFPEKLRI 346


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KYSKPKKIRV 10
K KPKK+R+
Sbjct: 904 KIEKPKKVRI 913


>sp|RL4_NATPD|LARGE ribosomal subunit protein uL4|Natronomonas pharaonis (strain ATCC

Query: 1 KYSKPKKIRV 10
KY++PK + V
Sbjct: 187 KYTEPKSVLV 196




107|Sequence|531|540|KKIRVCVGTW

>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IRVCVG 8
IRVC+G
Sbjct: 332 IRVCIG 337


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 2 KIRVCVGT 9
K+ VC+GT
Sbjct: 63 KVGVCIGT 70


>sp|KAE1_IGNH4|TRNA N6-adenosine threonylcarbamoyltransferase|Ignicoccus hospitalis

Query: 2 KIRVCVGTW 10
K +VC G W
Sbjct: 221 KKKVCYGLW 229


>sp|FEN_METMA|FLAP endonuclease 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IRVCVGT 9
I +CVGT
Sbjct: 229 IAICVGT 235


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IRVCVGT 9
I +CVGT
Sbjct: 229 IAICVGT 235


>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 IRVCVGT 9
I +CVGT
Sbjct: 229 IAICVGT 235


>sp|REG8_PYRFU|UNCHARACTERIZED HTH-type transcriptional regulator PF1734|Pyrococcus furiosus

Query: 1 KKIRVCVGT 9
KK+ V VGT
Sbjct: 27 KKLNVAVGT 35




108|Sequence|536|545|CVGTWNVNGG

>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VGTWNVNGG 10
+G WN+NG
Sbjct: 119 LGDWNLNGA 127


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus

Query: 4 TWNVNG 9
+WNVNG
Sbjct: 8 SWNVNG 13


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGTWNVN 8
+GTWN N
Sbjct: 488 LGTWNFN 494


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 CVGTWNVNGG 10
CVG +V+GG
Sbjct: 734 CVGQQSVHGG 743


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VGTWNVN 8
+G WNVN
Sbjct: 119 LGDWNVN 125


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 5 WNVNGG 10
W VNGG
Sbjct: 113 WGVNGG 118


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 3 GTWNVN 8
G WNVN
Sbjct: 44 GKWNVN 49


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 CVGTWNVNGG 10
CVG +V GG
Sbjct: 735 CVGQQSVRGG 744


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VGTWNVNGG 10
VGTW GG
Sbjct: 227 VGTWVKEGG 235


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 2 VGTWNVNGG 10
VGTW GG
Sbjct: 227 VGTWVKEGG 235


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 TWNVN 8
TWNVN
Sbjct: 441 TWNVN 445


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 VGTWNVNG 9
+GT+ VNG
Sbjct: 523 IGTYEVNG 530


>sp|TRM56_THEPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermofilum pendens (strain

Query: 2 VGTWNVNGG 10
V W NGG
Sbjct: 75 VANWKKNGG 83


>sp|PDXS_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanopyrus kandleri (strain

Query: 3 GTWNVNGG 10
GTW V G
Sbjct: 4 GTWRVKTG 11


>sp|LPLA_AERPE|PUTATIVE lipoate-protein ligase A|Aeropyrum pernix (strain ATCC 700893

Query: 2 VGTWNVNG 9
VG W V+G
Sbjct: 126 VGPWKVSG 133


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 2 VGTWNVNGG 10
+G +N+ GG
Sbjct: 3 IGFYNIQGG 11


>sp|FLAB2_METJA|FLAGELLIN B2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGTWNVNGG 10
+ WN++GG
Sbjct: 131 LAAWNLSGG 139


>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 GTWNVNGG 10
G W+V GG
Sbjct: 275 GDWSVEGG 282


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 CVGTWNVNGG 10
C GTW+ G
Sbjct: 115 CGGTWDAVKG 124




109|Sequence|541|550|NVNGGKQFRS

>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VNGGKQF 8
+NGGKQ
Sbjct: 106 INGGKQL 112


>sp|HPRT_METEZ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 2 VNGGKQ 7
VNGGKQ
Sbjct: 185 VNGGKQ 190


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 3 NGGKQFR 9
N GKQF+
Sbjct: 813 NSGKQFK 819


>sp|RS19_NITMS|SMALL ribosomal subunit protein uS19|Nitrosopumilus maritimus (strain

Query: 1 NVNGGKQFR 9
NV GK+FR
Sbjct: 81 NVFSGKEFR 89


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 4 GGKQFRS 10
GG QFRS
Sbjct: 13 GGSQFRS 19


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 4 GGKQFRS 10
GG QFRS
Sbjct: 13 GGSQFRS 19


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 2 VNGGKQ 7
+NGGKQ
Sbjct: 106 INGGKQ 111


>sp|RL2_PYRNV|LARGE ribosomal subunit protein uL2|Pyrobaculum neutrophilum (strain

Query: 4 GGKQFRS 10
GG QFRS
Sbjct: 13 GGSQFRS 19


>sp|RL2_PYRAE|LARGE ribosomal subunit protein uL2|Pyrobaculum aerophilum (strain ATCC

Query: 4 GGKQFRS 10
GG QFRS
Sbjct: 13 GGSQFRS 19


>sp|RL2_PYRCJ|LARGE ribosomal subunit protein uL2|Pyrobaculum calidifontis (strain

Query: 4 GGKQFRS 10
GG QFRS
Sbjct: 13 GGSQFRS 19


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 2 VNGGKQ 7
+NGGKQ
Sbjct: 106 INGGKQ 111


>sp|RS19_CENSY|SMALL ribosomal subunit protein uS19|Cenarchaeum symbiosum (strain A)

Query: 1 NVNGGKQFR 9
NV GK+FR
Sbjct: 81 NVFSGKEFR 89


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 4 GGKQFRS 10
GG QFRS
Sbjct: 13 GGNQFRS 19




110|Sequence|546|555|KQFRSIAFKN

***** No hits found ******


111|Sequence|551|560|IAFKNQTLTD

>sp|CS3HD_METJA|CRISPR-ASSOCIATED endonuclease Cas3-HD|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IAFKNQTLTD 10
+AFKNQ+L D
Sbjct: 10 LAFKNQSLID 19


>sp|AGL8_HALVD|LOW-SALT glycan biosynthesis protein Agl8|Haloferax volcanii (strain ATCC

Query: 3 FKNQTLTD 10
FKN+TLTD
Sbjct: 64 FKNETLTD 71




112|Sequence|556|565|QTLTDWLLDA

>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 1 QTLTDWLL 8
QTL +WLL
Sbjct: 108 QTLHEWLL 115


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QTLTDWLLDA 10
Q DWL+DA
Sbjct: 64 QHAEDWLVDA 73


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 QTLTDWLLDA 10
+TL W+LD
Sbjct: 355 ETLKQWILDG 364


>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain

Query: 1 QTLTDWLLDA 10
QT+ D LLDA
Sbjct: 21 QTVCDILLDA 30


>sp|THI4_SULAC|THIAMINE thiazole synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QTLTDWL 7
QT+ DW+
Sbjct: 22 QTMEDWM 28


>sp|DPCKG_METTP|GTP-DEPENDENT dephospho-CoA kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TLTDWLLDA 10
TLT+ LLDA
Sbjct: 99 TLTEELLDA 107


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 DWLLD 9
DWLLD
Sbjct: 442 DWLLD 446


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QTLTDWLL 8
Q LTDW +
Sbjct: 231 QGLTDWCI 238


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QTLTDWLL 8
Q LTDW +
Sbjct: 227 QGLTDWCI 234


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QTLTDWLL 8
Q LTDW +
Sbjct: 231 QGLTDWCI 238


>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19

Query: 5 DWLLDA 10
DW LDA
Sbjct: 93 DWTLDA 98


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 3 LTDWL 7
LTDWL
Sbjct: 225 LTDWL 229


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QTLTDWLL 8
Q LTDW +
Sbjct: 227 QELTDWCI 234


>sp|MCRW_METFV|METHYL-COENZYME M reductase II operon|Methanothermus fervidus (strain ATCC 43054

Query: 2 TLTDWL 7
T+TDW+
Sbjct: 128 TVTDWM 133


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 3 LTDWLLD 9
LTDWL D
Sbjct: 107 LTDWLAD 113


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TLTDWLLD 9
T T+WLLD
Sbjct: 139 TKTEWLLD 146


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TLTDWLLD 9
T T+WLLD
Sbjct: 139 TKTEWLLD 146


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 3 LTDWLLD 9
+ DWL+D
Sbjct: 109 IPDWLID 115




113|Sequence|561|570|WLLDAPKLAG

>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WLLDAPKLAG 10
W LD P +AG
Sbjct: 395 WNLDLPSIAG 404


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WLLDAPKLAG 10
W LD P +AG
Sbjct: 294 WKLDLPSIAG 303


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WLLDAPKLAG 10
W LD P +AG
Sbjct: 417 WNLDLPSIAG 426


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LLDAPKLAG 10
LLDAPK+ G
Sbjct: 824 LLDAPKVNG 832


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 1 WLLDAPKLAG 10
W +D P LA
Sbjct: 235 WTVDGPTLAA 244


>sp|Y1676_METJA|UNCHARACTERIZED protein MJ1676|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLDAPKLAG 10
L D PKLAG
Sbjct: 177 LDDIPKLAG 185


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 LLDAPKLA 9
L+DAP LA
Sbjct: 320 LVDAPNLA 327


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 LLDAPKLA 9
L+DAP LA
Sbjct: 320 LVDAPNLA 327


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 2 LLDAPKLA 9
L+DAP LA
Sbjct: 320 LVDAPNLA 327


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 2 LLDAPKLA 9
L+DAP LA
Sbjct: 320 LVDAPNLA 327


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LLDAPKLA 9
+LD PK+A
Sbjct: 331 ILDGPKIA 338


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 WLLDAP 6
W+L+AP
Sbjct: 345 WILEAP 350


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 WLLDAPKL 8
W D PKL
Sbjct: 193 WFFDLPKL 200


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WLLDAPKLA 9
W D PK A
Sbjct: 188 WFFDLPKAA 196


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WLLDAPKLAG 10
W+++ +LAG
Sbjct: 431 WIIEIARLAG 440


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WLLDAPKLAG 10
W+++ +LAG
Sbjct: 431 WIIEIARLAG 440


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WLLDAPKLAG 10
W+++ +LAG
Sbjct: 432 WIIEIARLAG 441


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 WLLDAPKLAG 10
WLLD L+G
Sbjct: 22 WLLDLAALSG 31




114|Sequence|566|575|PKLAGIQEFQ

>sp|SRP19_PYRAB|SIGNAL recognition particle 19 kDa|Pyrococcus abyssi (strain GE5 /

Query: 1 PKLAGIQE 8
PKL+GI E
Sbjct: 58 PKLSGIDE 65


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 2 KLAGIQEFQ 10
+LAG++ FQ
Sbjct: 118 ELAGVKNFQ 126




115|Sequence|571|580|IQEFQDKRSK

>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQEFQDKRSK 10
+QEF KR+K
Sbjct: 362 LQEFVKKRAK 371


>sp|NIKR_HALWD|PUTATIVE nickel-responsive regulator|Haloquadratum walsbyi (strain DSM

Query: 1 IQEFQDKR 8
++EF+DKR
Sbjct: 40 LEEFEDKR 47


>sp|HYD2B_PYRFU|SULFHYDROGENASE 2 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QEFQDKRSK 10
+EF++KR+K
Sbjct: 190 KEFEEKRAK 198


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter

Query: 1 IQEFQDKRSK 10
+QE DKR +
Sbjct: 16 LQELSDKRGR 25




116|Sequence|576|585|DKRSKPTDIF

>sp|RL3_CALMQ|LARGE ribosomal subunit protein uL3|Caldivirga maquilingensis (strain

Query: 2 KRSKPTDIF 10
K KPTD+F
Sbjct: 191 KEVKPTDVF 199


>sp|RL18E_THEKO|LARGE ribosomal subunit protein eL18|Thermococcus kodakarensis (strain

Query: 2 KRSKPTDI 9
KR+ PTDI
Sbjct: 3 KRTGPTDI 10


>sp|RL18E_THEON|LARGE ribosomal subunit protein eL18|Thermococcus onnurineus (strain

Query: 2 KRSKPTDI 9
KR+ PTDI
Sbjct: 2 KRTGPTDI 9


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKRSKPTDIF 10
DK KP +IF
Sbjct: 257 DKPLKPQEIF 266


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKRSKPTDI 9
D+R KP D+
Sbjct: 75 DRRIKPEDV 83


>sp|ASPD_METAR|L-ASPARTATE dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DKRSKPTDIF 10
D +PT+IF
Sbjct: 166 DSMDEPTEIF 175


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RSKPTDI 9
RSKP DI
Sbjct: 344 RSKPEDI 350




117|Sequence|581|590|PTDIFAIGFE

>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 1 PTDIFAIG 8
P DIFAI
Sbjct: 201 PADIFAIA 208


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PTDIFAIGFE 10
PTDIF+ E
Sbjct: 959 PTDIFSAPME 968


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTDIFAIGFE 10
P+ FAIGF+
Sbjct: 298 PSTGFAIGFD 307


>sp|PGP_METBU|PHOSPHOGLYCOLATE phosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PTDIFAIG 8
PTD AIG
Sbjct: 165 PTDYLAIG 172


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 2 TDIFAIGFE 10
T +FA+G+E
Sbjct: 506 TALFALGYE 514


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DIFAIGFE 10
D+FA+G E
Sbjct: 28 DLFALGLE 35


>sp|EHAA_METJA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanocaldococcus

Query: 1 PTDIFAIGFE 10
PT I A+G E
Sbjct: 54 PTPILALGIE 63


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 IFAIGF 9
IFAIGF
Sbjct: 19 IFAIGF 24


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 DIFAIGFE 10
D+FA+G E
Sbjct: 513 DVFAVGVE 520


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PTDIFAIGFE 10
P+ FAIGF+
Sbjct: 294 PSAGFAIGFD 303




118|Sequence|586|595|AIGFEEMVEL

>sp|Y045_METMA|PUTATIVE ankyrin repeat protein MM_0045|Methanosarcina mazei (strain ATCC

Query: 2 IGFEEMVEL 10
+GFEE+V+L
Sbjct: 342 VGFEEIVDL 350


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC

Query: 1 AIGFEEMVEL 10
AIG++E+VE+
Sbjct: 22 AIGYDEIVEI 31


>sp|PGP_PYRAE|PHOSPHOGLYCOLATE phosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AIGFEEMVEL 10
IGF+E VE+
Sbjct: 210 GIGFKEAVEI 219


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AIGFEEMVEL 10
+G++EMVE+
Sbjct: 23 PVGYDEMVEI 32


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 IGFEEMV 8
+GFEEMV
Sbjct: 62 LGFEEMV 68


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 3 GFEEMVEL 10
GFE M+EL
Sbjct: 209 GFETMIEL 216


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 AIGFEEMVEL 10
IG++E+VE+
Sbjct: 22 PIGYDEIVEI 31


>sp|AATB_HALSA|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 AIGFEEMVEL 10
IG++E+VE+
Sbjct: 22 PIGYDEIVEI 31


>sp|AATB_HALS3|A-TYPE ATP synthase subunit B|Halobacterium salinarum (strain ATCC 29341

Query: 1 AIGFEEMVEL 10
IG++E+VE+
Sbjct: 22 PIGYDEIVEI 31


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 4 FEEMVEL 10
F+EMVEL
Sbjct: 350 FDEMVEL 356


>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 AIGFEEMVE 9
A+ F EMVE
Sbjct: 226 AVKFREMVE 234


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 4 FEEMVEL 10
+EEMVEL
Sbjct: 80 YEEMVEL 86


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IGFEEMVEL 10
IG++E+VE+
Sbjct: 23 IGYDEIVEI 31


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 4 FEEMVEL 10
+EEMVEL
Sbjct: 80 YEEMVEL 86


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 4 FEEMVEL 10
F+EMVEL
Sbjct: 350 FDEMVEL 356


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 4 FEEMVEL 10
F+EMVEL
Sbjct: 350 FDEMVEL 356


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 4 FEEMVEL 10
F+EMVEL
Sbjct: 350 FDEMVEL 356


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 2 IGFEEMVEL 10
IG+EE+V +
Sbjct: 23 IGYEELVNI 31


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 3 GFEEMVEL 10
GFE +VEL
Sbjct: 210 GFETLVEL 217


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGFEEMV 8
+GFEEM+
Sbjct: 63 MGFEEMI 69




119|Sequence|591|600|EMVELNAGNI

>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EMVELNAGNI 10
E+VELNA ++
Sbjct: 83 ELVELNASDV 92


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 EMVELNAGN 9
EM+ELNA +
Sbjct: 76 EMIELNASD 84


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 EMVELNAGNI 10
E+VELN G +
Sbjct: 322 EIVELNVGAV 331


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 EMVELNAGN 9
EM++LNA N
Sbjct: 477 EMLKLNANN 485


>sp|RFCS_THEAC|REPLICATION factor C small subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 MVELNAGN 9
MVE+NA N
Sbjct: 69 MVEMNASN 76


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 EMVELNAGNI 10
E+VE + GN+
Sbjct: 638 ELVESHGGNV 647




120|Sequence|596|605|NAGNIVSAST

>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 NAGNIVSA 8
NAG I+SA
Sbjct: 297 NAGEIISA 304


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 NAGNIVSAST 10
N GN+V A T
Sbjct: 331 NVGNVVRAYT 340




121|Sequence|601|610|VSASTTNQKL

>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SASTTNQKL 10
S ST+NQK+
Sbjct: 575 SESTSNQKI 583




122|Sequence|606|615|TNQKLWAVEL

>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 TNQKLWAVEL 10
T + LWAVE+
Sbjct: 121 TGRGLWAVEV 130


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 1 TNQKLWAVE 9
TN++LW ++
Sbjct: 240 TNERLWLLQ 248


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 TNQKLW 6
TN+K+W
Sbjct: 402 TNKKMW 407


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 NQKLWAV 8
NQ +WAV
Sbjct: 406 NQVIWAV 412


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 TNQKLWAVE 9
TN++LW+ E
Sbjct: 160 TNKELWSQE 168




123|Sequence|611|620|WAVELQKTIS

>sp|PGK2_PYRFU|2-PHOSPHOGLYCERATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VELQKTIS 10
VEL+KTIS
Sbjct: 269 VELEKTIS 276


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 1 WAVELQ 6
WA+ELQ
Sbjct: 335 WAIELQ 340


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AVELQKTIS 10
A+ELQK I+
Sbjct: 221 AIELQKLIN 229


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 WAVELQK 7
W ++LQK
Sbjct: 217 WGIQLQK 223




124|Sequence|616|625|QKTISRDNKY

>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KTISRDNKY 10
+ I+RDNK+
Sbjct: 228 RAITRDNKW 236


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KTISRDNKY 10
++++RDNK+
Sbjct: 227 RSVTRDNKW 235


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KTISRDNKY 10
+ I+RDNK+
Sbjct: 228 RAITRDNKW 236


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 1 QKTISRD 7
Q+T+SRD
Sbjct: 137 QRTVSRD 143


>sp|PYRH_METTP|URIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 KTISRDNK 9
+TI+RDN+
Sbjct: 28 RTIARDNQ 35


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KTISRDNKY 10
+ ++RDNK+
Sbjct: 228 RAVTRDNKW 236


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 KTISRDNKY 10
+ I+RDNK+
Sbjct: 241 RAITRDNKW 249


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 KTISRDNKY 10
++++RDNK+
Sbjct: 227 RSVTRDNKW 235


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KTISRDNKY 10
++I+RDNK+
Sbjct: 228 RSITRDNKW 236


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KTISRDNKY 10
++I+RDNK+
Sbjct: 228 RSITRDNKW 236


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KTISRDNKY 10
+ ++RDNK+
Sbjct: 228 RAVTRDNKW 236


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 KTISRDNKY 10
++++RDNK+
Sbjct: 226 RSLTRDNKW 234


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QKTISRDNKY 10
++ I+RDNK+
Sbjct: 227 ERAITRDNKW 236


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 1 QKTISRDN 8
Q+TI++DN
Sbjct: 75 QETITKDN 82


>sp|PSTOM_PYRHO|STOMATIN homolog PH1511|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QKTISRDN 8
Q+TI++DN
Sbjct: 75 QETITKDN 82


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 ISRDNK 9
ISRDNK
Sbjct: 198 ISRDNK 203


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QKTISRDN 8
+KTI +DN
Sbjct: 204 EKTIEKDN 211




125|Sequence|621|630|RDNKYVLLAS

>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 1 RDNKYVLLAS 10
+DN+Y+ LAS
Sbjct: 69 KDNEYINLAS 78


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RDNKYVLLA 9
RDNK +LL+
Sbjct: 200 RDNKIILLS 208


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RDNKYVLLA 9
RDNKY+ A
Sbjct: 403 RDNKYLDFA 411


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 RDNKYVLLA 9
RDNKY+ A
Sbjct: 400 RDNKYLDFA 408


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RDNKYVLLA 9
RDNKY+ A
Sbjct: 404 RDNKYLDFA 412


>sp|RNP4_METS3|RIBONUCLEASE P protein component 4|Methanobrevibacter smithii (strain ATCC

Query: 1 RDNKYVLLA 9
R N+YV+LA
Sbjct: 35 RSNRYVVLA 43


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 1 RDNKYVLLA 9
+DN Y+LLA
Sbjct: 173 KDNGYLLLA 181


>sp|HERA_PYRFU|DNA double-strand break repair helicase|Pyrococcus furiosus (strain

Query: 1 RDNKYVLLAS 10
RD YVL AS
Sbjct: 465 RDQDYVLKAS 474




126|Sequence|626|635|VLLASEQLVG

>sp|MTSB_METMA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLLASEQLVG 10
+LLA+E L+G
Sbjct: 121 ILLANEALIG 130


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLLASEQL 8
VLLA EQL
Sbjct: 160 VLLAEEQL 167




127|Sequence|631|640|EQLVGVCLFV

>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 1 EQLVGVCLFV 10
EQLVG +F+
Sbjct: 89 EQLVGSNMFI 98


>sp|Y491_METJA|UNCHARACTERIZED protein MJ0491|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LVGVCLF 9
+VGVC++
Sbjct: 141 MVGVCMY 147




128|Sequence|636|645|VCLFVFIRPQ

>sp|Y1577_METJA|UNCHARACTERIZED protein MJ1577|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCLFVFI 7
VCL +FI
Sbjct: 10 VCLLIFI 16


>sp|ASD_METAC|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina

Query: 1 VCLFVFIR 8
+C+F+F++
Sbjct: 81 ICIFMFLQ 88


>sp|ASD_METMA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina mazei

Query: 1 VCLFVFIR 8
+C+F+F++
Sbjct: 81 ICIFMFLQ 88


>sp|ASD_METBF|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina barkeri

Query: 1 VCLFVFIR 8
+C+F+F++
Sbjct: 80 ICIFMFLQ 87




129|Sequence|641|650|FIRPQHAPFI

>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 FIRPQHAP 8
F+RP++AP
Sbjct: 7 FLRPEYAP 14


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PQHAPF 9
P HAPF
Sbjct: 312 PAHAPF 317


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 FIRPQH 6
FIRP+H
Sbjct: 142 FIRPKH 147


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PQHAPF 9
P HAPF
Sbjct: 309 PAHAPF 314


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PQHAPF 9
P HAPF
Sbjct: 318 PAHAPF 323


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FIRPQHAPFI 10
FI+PQ A ++
Sbjct: 319 FIKPQEALYV 328


>sp|Y4320_HALS3|UPF0148 protein OE_4320R|Halobacterium salinarum (strain ATCC 29341

Query: 3 RPQHAP 8
RP+HAP
Sbjct: 126 RPEHAP 131


>sp|Y2366_HALSA|UPF0148 protein VNG_2366C|Halobacterium salinarum (strain ATCC 700922

Query: 3 RPQHAP 8
RP+HAP
Sbjct: 126 RPEHAP 131


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PQHAPF 9
P HAPF
Sbjct: 318 PAHAPF 323


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PQHAPF 9
P HAPF
Sbjct: 371 PAHAPF 376


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PQHAPF 9
P HAPF
Sbjct: 318 PAHAPF 323


>sp|PIMT_AERPE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PQHAPF 9
PQHAP+
Sbjct: 174 PQHAPY 179


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PQHAPF 9
P HAPF
Sbjct: 309 PAHAPF 314


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PQHAPF 9
P HAPF
Sbjct: 326 PAHAPF 331


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 PQHAPF 9
P HAPF
Sbjct: 326 PAHAPF 331


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PQHAPF 9
P HAPF
Sbjct: 326 PAHAPF 331


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 PQHAPF 9
P HAPF
Sbjct: 319 PAHAPF 324


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PQHAPF 9
P HAPF
Sbjct: 326 PAHAPF 331


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 PQHAPF 9
P HAPF
Sbjct: 326 PAHAPF 331


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PQHAPF 9
P HAPF
Sbjct: 308 PAHAPF 313


>sp|PIMT_METBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PQHAPF 9
P+HAP+
Sbjct: 131 PEHAPY 136


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FIRPQHA 7
FI+P HA
Sbjct: 110 FIKPAHA 116




130|Sequence|646|655|HAPFIRDVAV

>sp|AROD_METMJ|3-DEHYDROQUINATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HAPFIRDVAV 10
HAPFI+ V
Sbjct: 93 HAPFIKSQGV 102


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PFIRDV 8
PF+RDV
Sbjct: 272 PFVRDV 277


>sp|RIFK_PYRHO|RIBOFLAVIN kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HAPFIRD 7
+APFIR+
Sbjct: 108 YAPFIRE 114


>sp|Y554_ARCFU|PUTATIVE sulfur carrier protein AF_0554|Archaeoglobus fulgidus (strain

Query: 1 HAPFIRDV 8
H P +RDV
Sbjct: 52 HEPAVRDV 59


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 3 PFIRDVAV 10
PFI D+AV
Sbjct: 374 PFIADLAV 381


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 3 PFIRDV 8
PF+RDV
Sbjct: 272 PFVRDV 277


>sp|Y1774_METTH|PROBABLE metallophosphoesterase MTH_1774|Methanothermobacter

Query: 1 HAPFIRDV 8
H PFIR++
Sbjct: 115 HQPFIREL 122




131|Sequence|651|660|RDVAVDTVKT

>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RDVAVDT 7
RDVA+DT
Sbjct: 94 RDVAIDT 100


>sp|Y273_METKA|UPF0235 protein MK0273|Methanopyrus kandleri (strain AV19 /

Query: 1 RDVAVDTVK 9
RDV+VD VK
Sbjct: 82 RDVSVDEVK 90


>sp|GLNA_THEKO|GLUTAMINE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RDVAVDTVK 9
RD+ +DT K
Sbjct: 423 RDIPIDTKK 431


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 RDVAVDTVKT 10
RDV V+ VKT
Sbjct: 32 RDVEVEIVKT 41


>sp|DHYS2_ARCFU|PROBABLE deoxyhypusine synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RDVAVDTVK 9
R+V +DT++
Sbjct: 176 REVVIDTIR 184




132|Sequence|656|665|DTVKTGMGGA

>sp|MTTC_METBA|TRIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 DTVKTGMGGA 10
D VKT +GGA
Sbjct: 176 DQVKTMVGGA 185


>sp|MTTC1_METAC|TRIMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DTVKTGMGGA 10
D VKT +GGA
Sbjct: 176 DQVKTMVGGA 185


>sp|NRPA_METMA|NIF-REGULATING protein A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DTVKTGMG 8
D VKTG G
Sbjct: 55 DKVKTGYG 62


>sp|MTTC2_METMA|TRIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DTVKTGMGGA 10
D VKT +GGA
Sbjct: 176 DQVKTMVGGA 185


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DTVKTGMGGA 10
DT+K M GA
Sbjct: 312 DTIKFEMSGA 321




133|Sequence|661|670|GMGGATGNKG

>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 MGGATGNKG 10
MGG TG G
Sbjct: 194 MGGTTGRDG 202


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MGGATGNKG 10
MGG TG G
Sbjct: 194 MGGTTGRDG 202


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 3 GGATGNKG 10
GG+TG++G
Sbjct: 325 GGSTGSEG 332


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 MGGATGNK 9
MGG TG K
Sbjct: 244 MGGLTGGK 251


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 2 MGGATGNK 9
MGG GNK
Sbjct: 134 MGGLWGNK 141


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 GMGGATG 7
G GGATG
Sbjct: 354 GRGGATG 360


>sp|FPRA_METTM|COENZYME F420H(2) oxidase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GMGGATG 7
G GGATG
Sbjct: 354 GNGGATG 360


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 MGGATGNKG 10
MGG TG G
Sbjct: 229 MGGKTGRDG 237


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 1 GMGGATGNKG 10
G+G AT N+G
Sbjct: 436 GLGYATNNRG 445


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 GMGGATGNKG 10
G+G AT N+G
Sbjct: 436 GLGYATNNRG 445


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 GMGGATGNKG 10
G+G AT N+G
Sbjct: 438 GLGYATNNRG 447


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 GMGGATGNKG 10
G+G AT N+G
Sbjct: 438 GLGYATNNRG 447


>sp|APGM1_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GATGNK 9
GATGNK
Sbjct: 268 GATGNK 273


>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 GMGGATGNKG 10
GM G NKG
Sbjct: 142 GMAGVVTNKG 151




134|Sequence|666|675|TGNKGAVAIR

>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 2 GNKGAVAI 9
GNK AVAI
Sbjct: 160 GNKDAVAI 167


>sp|DNLI_METKA|DNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GNKGAVAIR 10
G KGAV I+
Sbjct: 242 GGKGAVEIK 250


>sp|RL35A_METKA|LARGE ribosomal subunit protein eL33|Methanopyrus kandleri (strain AV19

Query: 2 GNKGAVAIR 10
GN GAV +R
Sbjct: 65 GNNGAVRVR 73


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 2 GNKGAVAIR 10
G+KGA+A +
Sbjct: 228 GSKGAIAYK 236




135|Sequence|671|680|AVAIRMLFHT

***** No hits found ******


136|Sequence|676|685|MLFHTTSLCF

>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LFHTTSLCF 10
+ H T LCF
Sbjct: 181 MLHATMLCF 189


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 FHTTSL 8
FHTTSL
Sbjct: 150 FHTTSL 155


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FHTTSL 8
FHTTSL
Sbjct: 150 FHTTSL 155




137|Sequence|681|690|TSLCFVCSHF

>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LCFVCSH 9
+C +CSH
Sbjct: 67 ICGICSH 73


>sp|GATA_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus vannielii (strain ATCC

Query: 1 TSLCFVCS 8
T++C +CS
Sbjct: 386 TNICGICS 393


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 TSLCFVCS 8
T++C +CS
Sbjct: 386 TNICGICS 393


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 TSLCFVCS 8
T++C +CS
Sbjct: 386 TNICGICS 393


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 TSLCFVCS 8
T++C +CS
Sbjct: 386 TNICGICS 393


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 TSLCFVCS 8
T++C +CS
Sbjct: 386 TNICGICS 393




138|Sequence|686|695|VCSHFAAGQS

>sp|NDK_METMJ|NUCLEOSIDE diphosphate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 HFAAGQ 9
HFAAG+
Sbjct: 130 HFAAGE 135




139|Sequence|691|700|AAGQSQVKER

***** No hits found ******


140|Sequence|696|705|QVKERNEDFI

>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QVKERNEDFI 10
Q+KER ED I
Sbjct: 101 QIKERKEDII 110


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QVKERNEDFI 10
Q+KER ED I
Sbjct: 101 QIKERKEDII 110


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QVKERNEDFI 10
+VKE N DF+
Sbjct: 367 EVKEENPDFL 376


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QVKERNEDFI 10
QV+E N DF+
Sbjct: 353 QVEEENPDFL 362


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 QVKERNEDFI 10
Q+K+R ED I
Sbjct: 101 QIKDRKEDII 110


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QVKERNEDFI 10
Q+KE+ ED I
Sbjct: 98 QIKEKKEDII 107


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii

Query: 1 QVKERNEDFI 10
+VKE+ E+FI
Sbjct: 67 EVKEKTENFI 76


>sp|EF1A_METS3|ELONGATION factor 1-alpha|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QVKERNEDFI 10
QV E N DF+
Sbjct: 353 QVAEENPDFL 362


>sp|CETZ6_HALVD|TUBULIN-LIKE protein CetZ6|Haloferax volcanii (strain ATCC 29605

Query: 3 KERNEDFI 10
++RN DFI
Sbjct: 24 RQRNPDFI 31


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 KERNED 8
KERNED
Sbjct: 896 KERNED 901


>sp|EF1A_METMA|ELONGATION factor 1-alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QVKERNEDFI 10
QVKE N F+
Sbjct: 363 QVKEENPTFL 372


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 QVKERNEDFI 10
QVKE N +I
Sbjct: 362 QVKEENPTYI 371


>sp|EF1A_METBF|ELONGATION factor 1-alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 QVKERNEDFI 10
QVKE N F+
Sbjct: 363 QVKEENPTFL 372


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 KERNEDF 9
K+RNED+
Sbjct: 262 KQRNEDW 268


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VKERNEDF 9
V ERNE+F
Sbjct: 511 VSERNEEF 518


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QVKERNEDFI 10
+V E N DFI
Sbjct: 363 EVAEENPDFI 372


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 QVKERNEDFI 10
QVKE N F+
Sbjct: 363 QVKEENPAFL 372


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 QVKERNEDFI 10
QVKE N F+
Sbjct: 363 QVKEENPTFL 372


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 1 QVKERNEDF 9
Q++ERNE+
Sbjct: 514 QIQERNENI 522


>sp|EF1A_ARCFU|ELONGATION factor 1-alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QVKERNEDFI 10
QVKE N F+
Sbjct: 363 QVKEENPQFL 372


>sp|EF1A_METST|ELONGATION factor 1-alpha|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QVKERNEDFI 10
Q KE N DF+
Sbjct: 353 QPKEENPDFL 362


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QVKERNEDFI 10
+V+E NED I
Sbjct: 361 KVREANEDII 370


>sp|PFDB_ARCFU|PREFOLDIN subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VKERNEDFI 10
VKE+ ED I
Sbjct: 64 VKEKKEDVI 72


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain

Query: 1 QVKERNEDFI 10
++KE+ EDF+
Sbjct: 2 RIKEKPEDFV 11




141|Sequence|701|710|NEDFIEIARK

>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EDFIEIAR 9
EDF+E+A+
Sbjct: 93 EDFVEVAK 100


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EDFIEIARK 10
E FIEIA K
Sbjct: 378 ESFIEIAEK 386


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EDFIEIARK 10
E F+EIAR+
Sbjct: 378 ESFVEIARE 386


>sp|AMZA_HALMA|ARCHAEMETZINCIN marismortui (strain ATCC 43049

Query: 2 EDFIEIARK 10
E+FI++AR+
Sbjct: 54 EEFIDLARR 62


>sp|DEGLY_PYRFU|DEGLYCASE PfpI|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NEDFIEIARK 10
NE +EIARK
Sbjct: 79 NEKAVEIARK 88


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 NEDFIEIARK 10
N +F+E+A K
Sbjct: 210 NREFVEVAGK 219


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 NEDFIEIARK 10
N+D +EIAR+
Sbjct: 161 NKDAVEIARR 170


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 2 EDFIEIARK 10
+D IEIA+K
Sbjct: 384 DDVIEIAKK 392


>sp|PURK_SACS2|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 NEDFIEIARK 10
N++ +EIAR+
Sbjct: 222 NQNIVEIARR 231


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain

Query: 1 NEDFIEIARK 10
+ +F+EIAR+
Sbjct: 16 SSEFVEIARR 25


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NEDFIEIARK 10
NED + +A+K
Sbjct: 183 NEDIVNMAKK 192


>sp|FTTA_METJA|TRANSCRIPTION termination factor FttA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EDFIEIARK 10
+D++EIA+K
Sbjct: 276 KDYLEIAKK 284


>sp|DEGLY_PYRAB|DEGLYCASE PYRAB04690|Pyrococcus abyssi (strain GE5 /

Query: 1 NEDFIEIARK 10
NE +EIA+K
Sbjct: 79 NEKAVEIAKK 88


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EDFIEIARK 10
+DFIE+ +K
Sbjct: 300 KDFIELGKK 308


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 EDFIEIARK 10
+DFIE+ +K
Sbjct: 300 KDFIELGKK 308


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 EDFIEIARK 10
ED IEI++K
Sbjct: 217 EDIIEISKK 225


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DFIEIARK 10
DFI++A+K
Sbjct: 264 DFIKVAKK 271


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DFIEIARK 10
DFIE+ R+
Sbjct: 302 DFIELGRR 309


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 NEDFIEIARK 10
+ED+IE+ R
Sbjct: 200 DEDYIEVNRS 209


>sp|Y1504_ARCFU|UNCHARACTERIZED protein AF_1504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DFIEIARK 10
DF+E+ R+
Sbjct: 194 DFVEVVRR 201


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 NEDFIEIARK 10
N++ IEIA+K
Sbjct: 160 NQNAIEIAKK 169


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 1 NEDFIEIARK 10
N++ IEIA+K
Sbjct: 160 NQNAIEIAKK 169


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 NEDFIEIARK 10
N++ IEIA+K
Sbjct: 160 NQNAIEIAKK 169


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 NEDFIEIARK 10
N++ IEIA+K
Sbjct: 160 NQNAIEIAKK 169


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 NEDFIEIARK 10
N++ IEIA+K
Sbjct: 160 NQNAIEIAKK 169


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 NEDFIEIARK 10
N++ IEIA+K
Sbjct: 160 NQNAIEIAKK 169




142|Sequence|706|715|EIARKLSFPM

>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 EIARKLSFPM 10
EIARK+ FP+
Sbjct: 704 EIARKIGFPV 713


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 1 EIARKLSFPM 10
+IA+KL FP+
Sbjct: 346 QIAKKLGFPV 355


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIARKLSFPM 10
E+A KLS+P+
Sbjct: 119 ELANKLSYPV 128


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EIARKLSFP 9
EI RKLS P
Sbjct: 194 EITRKLSIP 202


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 EIARKLSFPM 10
EIA +++FP+
Sbjct: 687 EIAERITFPV 696


>sp|KCY_PYRCJ|CYTIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EIARKLSFPM 10
E+AR L PM
Sbjct: 20 EVARVLKLPM 29


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 EIARKLSFPM 10
E+A+++ FP+
Sbjct: 697 EVAKRIGFPV 706


>sp|RL6_METBF|LARGE ribosomal subunit protein uL6|Methanosarcina barkeri (strain

Query: 1 EIARKLSFP 9
EIARK+ P
Sbjct: 4 EIARKIEIP 12


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 EIARKLSFPM 10
E+A+++ FP+
Sbjct: 696 EVAKRIGFPV 705


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 EIARKLSFPM 10
EIAR L +P+
Sbjct: 153 EIARYLGYPV 162


>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 1 EIARKLSFP 9
E++RK+S P
Sbjct: 108 ELSRKISLP 116


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IARKLSFPM 10
+ +KL FPM
Sbjct: 50 LGKKLKFPM 58


>sp|BAX1_SULTO|ENDONUCLEASE Bax1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIARKLSFPM 10
EIA KLS P+
Sbjct: 394 EIASKLSLPV 403


>sp|IDI2_ARCFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ARKLSFPM 10
+KLSFP+
Sbjct: 52 GKKLSFPL 59


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 EIARKLSFPM 10
E+A+++ FP+
Sbjct: 696 EVAQRIGFPV 705


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 EIARKLSFPM 10
E+A+++ FP+
Sbjct: 20 EVAKRIGFPV 29


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ARKLSFPM 10
ARKLS P+
Sbjct: 502 ARKLSIPV 509


>sp|LYSX_SULAC|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EIARKLSFP 9
++A+K+ FP
Sbjct: 110 DLAKKIGFP 118


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 1 EIARKLSFPM 10
EIA+++ +P+
Sbjct: 232 EIAKRIGYPV 241




143|Sequence|711|720|LSFPMGRMLF

>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 1 LSFPMGRML 9
LS+P+ RML
Sbjct: 68 LSYPVARML 76


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 1 LSFPMGRML 9
LS+P RML
Sbjct: 70 LSYPFARML 78


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain

Query: 1 LSFPMGRML 9
LS+P RML
Sbjct: 70 LSYPFARML 78


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 2 SFPMGRML 9
SFP GR++
Sbjct: 207 SFPQGRVI 214




144|Sequence|716|725|GRMLFSHDYV

>sp|Y356_ARCFU|UNCHARACTERIZED sugar kinase AF_0356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MLFSHDY 9
MLFS DY
Sbjct: 149 MLFSEDY 155


>sp|RL18A_HYPBU|LARGE ribosomal subunit protein eL20|Hyperthermus butylicus (strain DSM

Query: 1 GRMLFSHD 8
GRML HD
Sbjct: 11 GRMLIRHD 18


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 GRMLFSHDYV 10
GR+L+S YV
Sbjct: 91 GRVLYSSKYV 100


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GRMLFSH 7
GR+LF H
Sbjct: 25 GRLLFEH 31


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 1 GRMLFSH 7
GR+LF H
Sbjct: 25 GRLLFEH 31


>sp|RL18A_AERPE|LARGE ribosomal subunit protein eL20|Aeropyrum pernix (strain ATCC

Query: 1 GRMLFSHD 8
G ML SHD
Sbjct: 11 GEMLISHD 18


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 1 GRMLFSHDY 9
G ++FS+DY
Sbjct: 132 GAIVFSYDY 140


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FSHDYV 10
F+HDY+
Sbjct: 667 FAHDYI 672


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RMLFSHDYV 10
R L+ H+YV
Sbjct: 32 RNLYKHEYV 40


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 RMLFSHDY 9
+++ SHDY
Sbjct: 250 KIMISHDY 257


>sp|Y364_METJA|UNCHARACTERIZED protein MJ0364|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FSHDY 9
FSHDY
Sbjct: 9 FSHDY 13


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RMLFSHDYV 10
RML +H Y+
Sbjct: 25 RMLSNHPYI 33


>sp|YA00_METTH|UPF0146 protein MTH_1000|Methanothermobacter thermautotrophicus (strain

Query: 1 GRMLFSHDYV 10
GR L+ DY+
Sbjct: 25 GRFLYVSDYI 34




145|Sequence|721|730|SHDYVFWCGD

>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 6 FWCGD 10
FWCGD
Sbjct: 276 FWCGD 280


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 SHDYVFWCGD 10
S DY ++C D
Sbjct: 48 SKDYKYYCSD 57


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YVFWCGD 10
Y+F CGD
Sbjct: 1230 YIFKCGD 1236


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 HDYVFW 7
+DY+FW
Sbjct: 178 YDYIFW 183


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 3 DYVFWCGD 10
DY+F C D
Sbjct: 43 DYLFMCSD 50


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 FWCGD 10
+WCGD
Sbjct: 276 YWCGD 280


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 3 DYVFWCGD 10
DY F+C D
Sbjct: 44 DYPFFCAD 51


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 VFWCGD 10
V WCGD
Sbjct: 418 VNWCGD 423


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 3 DYVFWCG 9
DYV+ CG
Sbjct: 168 DYVYACG 174


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 VFWCGD 10
V WCGD
Sbjct: 430 VPWCGD 435


>sp|RS4E_META3|SMALL ribosomal subunit protein eS4|Methanococcus aeolicus (strain ATCC

Query: 3 DYVFWCGD 10
DYVF GD
Sbjct: 230 DYVFIVGD 237


>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 1 SHDYVFW 7
S DY FW
Sbjct: 185 SQDYDFW 191


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 SHDYVFWCGD 10
+H YV W D
Sbjct: 108 THIYVLWAPD 117


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 FWCG 9
FWCG
Sbjct: 414 FWCG 417


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 FWCG 9
FWCG
Sbjct: 414 FWCG 417


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii (strain

Query: 3 DYVFWCGD 10
DYVF GD
Sbjct: 230 DYVFVVGD 237


>sp|KDGK_THETE|2-DEHYDRO-3-DEOXYGLUCONOKINASE tenax

Query: 4 YVFWCG 9
YVFW G
Sbjct: 247 YVFWNG 252


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 SHDYVFWCGD 10
+ DY ++C D
Sbjct: 47 AKDYKYYCSD 56


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 3 DYVFW 7
DY+FW
Sbjct: 177 DYLFW 181


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SHDYVFWC 8
S YVF+C
Sbjct: 426 SKKYVFYC 433


>sp|NIFD_METIV|NITROGENASE molybdenum-iron protein alpha chain|Methanobacterium ivanovii

Query: 1 SHDYVFWCGD 10
H YV CGD
Sbjct: 17 EHTYVKHCGD 26


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 SHDYVFW 7
+H+YV W
Sbjct: 805 NHNYVVW 811


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HDYVFWCG 9
HD +F CG
Sbjct: 44 HDVLFICG 51


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 3 DYVFW 7
DY+FW
Sbjct: 179 DYLFW 183


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 1 SHDYVFWCGD 10
+ D V WC D
Sbjct: 191 TFDNVDWCND 200


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 VFWCGD 10
V WCG+
Sbjct: 424 VHWCGN 429


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 SHDYVFWCGD 10
S D+VF GD
Sbjct: 675 SPDFVFVAGD 684


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 VFWCGD 10
V WCG+
Sbjct: 424 VHWCGE 429


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DYVFWCG 9
DY F CG
Sbjct: 528 DYQFGCG 534


>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DYVFWCGD 10
DYV W G+
Sbjct: 259 DYVSWHGN 266


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 6 FWCGD 10
+WCG+
Sbjct: 276 YWCGE 280




146|Sequence|726|735|FWCGDFNYRI

>sp|DHYS_THEVO|PROBABLE deoxyhypusine synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FWCGDFNY 8
++CG FNY
Sbjct: 104 YYCGSFNY 111


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 2 WCGDFN 7
WCG+F+
Sbjct: 205 WCGEFS 210


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 1 FWCGDFNYR 9
+W G +NY+
Sbjct: 156 YWTGSYNYQ 164


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 FWCGDFN 7
W GDFN
Sbjct: 246 LWLGDFN 252


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FWCGDFNY 8
++CG F+Y
Sbjct: 104 YYCGSFSY 111


>sp|MFNB_METMA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GDFNYR 9
GDFNY+
Sbjct: 60 GDFNYK 65


>sp|MFNB_METBF|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GDFNYR 9
GDFNY+
Sbjct: 60 GDFNYK 65


>sp|MFNB_METAC|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GDFNYR 9
GDFNY+
Sbjct: 60 GDFNYK 65


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 FWCGDFNY 8
F GDFNY
Sbjct: 2 FRLGDFNY 9


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 GDFNYRI 10
GDF YR+
Sbjct: 602 GDFEYRL 608


>sp|TRM56_METM6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 2 WCGDFNYRI 10
W GDF + +
Sbjct: 54 WGGDFKFEV 62


>sp|TRM56_METM5|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus maripaludis

Query: 2 WCGDFNYRI 10
W GDF + +
Sbjct: 54 WGGDFKFEV 62


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WCGDFN 7
WC D+N
Sbjct: 126 WCNDYN 131


>sp|AROC_METVS|CHORISMATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 GDFNY 8
GDFNY
Sbjct: 164 GDFNY 168


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 GDFNY 8
GDFNY
Sbjct: 163 GDFNY 167


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 DFNYR 9
DFNYR
Sbjct: 754 DFNYR 758


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 4 GDFNYR 9
GD NYR
Sbjct: 171 GDLNYR 176


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WCGDFNYRI 10
+CG+ NY +
Sbjct: 231 YCGETNYTV 239


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WCGDFNYRI 10
+CG+ NY +
Sbjct: 231 YCGETNYTV 239


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WCGDFNYRI 10
+CG+ NY +
Sbjct: 231 YCGETNYTV 239


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 FWCGDFNYRI 10
W GD N +I
Sbjct: 270 LWQGDINSKI 279


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FWCGDFNYRI 10
W GD N +I
Sbjct: 270 LWQGDINSKI 279


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GDFNYRI 10
G+FNY I
Sbjct: 456 GEFNYEI 462


>sp|TRM56_META3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanococcus aeolicus

Query: 2 WCGDFNYRI 10
W GDF + +
Sbjct: 54 WGGDFKFDV 62


>sp|NFI_SACS2|ENDONUCLEASE V|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|NFI_SACI7|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|NFI_SACI6|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.4 /

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|NFI_SACI4|ENDONUCLEASE V|Saccharolobus islandicus (strain M.14.25 /

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|NFI_SACI3|ENDONUCLEASE V|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|NFI_SACI2|ENDONUCLEASE V|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|NFI_SACI1|ENDONUCLEASE V|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GDFNYR 9
GD+NY+
Sbjct: 58 GDYNYK 63


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 WCGDFNY 8
W G++NY
Sbjct: 606 WSGEYNY 612


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 WCGDFN 7
W G+FN
Sbjct: 275 WIGEFN 280


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus (strain

Query: 3 CGDFN 7
CGDFN
Sbjct: 149 CGDFN 153


>sp|Y521_ARCFU|UNCHARACTERIZED N-acetyltransferase AF_0521|Archaeoglobus fulgidus (strain ATCC

Query: 1 FWCGDFNYR 9
W G NYR
Sbjct: 118 LWVGRTNYR 126




147|Sequence|731|740|FNYRIDLPNE

>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 4 RIDLPNE 10
RIDLPNE
Sbjct: 210 RIDLPNE 216


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RIDLPNE 10
RID+PNE
Sbjct: 630 RIDVPNE 636


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 FNYRIDLPNE 10
FN +DLP+E
Sbjct: 45 FNMYVDLPSE 54


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 NYRIDLPN 9
N RID+PN
Sbjct: 628 NVRIDVPN 635


>sp|DGGGP_METS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FNYRIDLPNE 10
F+Y+IDL N+
Sbjct: 55 FDYKIDLINK 64


>sp|CDPAS_THEON|CDP-ARCHAEOL synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FNYRIDLP 8
F RIDLP
Sbjct: 103 FKRRIDLP 110


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 RIDLPNE 10
RID+PN+
Sbjct: 629 RIDVPND 635


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 RIDLPN 9
R+DLPN
Sbjct: 823 RLDLPN 828


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 4 RIDLPNE 10
R+DLP+E
Sbjct: 226 RLDLPSE 232


>sp|DGGGP_ARCFU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FNYRIDLPN 9
F+Y +DL N
Sbjct: 70 FDYEVDLVN 78


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 1 FNYRIDLP 8
FN ID+P
Sbjct: 284 FNVEIDIP 291


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FNYRIDLPNE 10
F+ +DLPN+
Sbjct: 47 FDAFVDLPND 56


>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FNYRIDLPNE 10
F IDLP E
Sbjct: 43 FEVAIDLPEE 52


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 FNYRIDLP 8
+NY +D+P
Sbjct: 370 YNYELDVP 377


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 YRIDLP 8
YR+DLP
Sbjct: 471 YRVDLP 476


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NYRIDLP 8
+YR+D+P
Sbjct: 104 DYRLDIP 110


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 1 FNYRIDLP 8
+Y+IDLP
Sbjct: 303 LDYKIDLP 310


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 1 FNYRIDLPNE 10
FNY +DL E
Sbjct: 174 FNYFVDLTKE 183


>sp|MPTA_PYRHO|GTP cyclohydrolase MptA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FNYRIDLPNE 10
F IDLP E
Sbjct: 46 FEITIDLPRE 55


>sp|MPTA_PYRAB|GTP cyclohydrolase MptA|Pyrococcus abyssi (strain GE5 /

Query: 1 FNYRIDLPNE 10
F IDLP E
Sbjct: 43 FEVTIDLPRE 52


>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 5 IDLPNE 10
+DLPNE
Sbjct: 114 LDLPNE 119


>sp|SYFB_SACS2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NYRIDLPNE 10
YR+D+ NE
Sbjct: 317 QYRVDIINE 325


>sp|SYFB_SACI3|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.27)

Query: 3 YRIDLPNE 10
YR+D+ NE
Sbjct: 318 YRVDILNE 325


>sp|SYFB_SACI7|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YRIDLPNE 10
YR+D+ NE
Sbjct: 318 YRVDILNE 325


>sp|SYFB_SACI2|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YRIDLPNE 10
YR+D+ NE
Sbjct: 318 YRVDILNE 325


>sp|SYFB_SACI1|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YRIDLPNE 10
YR+D+ NE
Sbjct: 318 YRVDILNE 325


>sp|SYFB_SACI6|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 3 YRIDLPNE 10
YR+D+ NE
Sbjct: 318 YRVDILNE 325


>sp|SYFB_SACI4|PHENYLALANINE--TRNA ligase beta subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 3 YRIDLPNE 10
YR+D+ NE
Sbjct: 318 YRVDILNE 325


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 YRIDLPNE 10
YR+++P E
Sbjct: 279 YRVEVPEE 286


>sp|MTM6_METJA|TYPE II methyltransferase M.MjaVI|Methanocaldococcus jannaschii

Query: 5 IDLPNE 10
+DLPNE
Sbjct: 25 VDLPNE 30


>sp|Y1659_METJA|UNCHARACTERIZED ATP-binding protein MJ1659|Methanocaldococcus jannaschii (strain

Query: 1 FNYRIDLPNE 10
FN+ IDL E
Sbjct: 176 FNFFIDLTKE 185




148|Sequence|736|745|DLPNEEVKEL

>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LPNEEVKEL 10
LPNEEV E
Sbjct: 146 LPNEEVAEF 154


>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPNEEVKE 9
LPNEEV E
Sbjct: 146 LPNEEVAE 153


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DLPNEEVKE 9
DLP EE+K+
Sbjct: 517 DLPQEELKK 525


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLPNEEVKEL 10
+L NEE+KEL
Sbjct: 297 ELSNEEIKEL 306


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 1 DLPNEEVKEL 10
DL +EE+KEL
Sbjct: 297 DLSDEEIKEL 306


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 DLPNEEVKEL 10
DL +EE+KEL
Sbjct: 297 DLKDEEIKEL 306


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 DLPNEEVKEL 10
D P E++KE+
Sbjct: 203 DFPAEKIKEM 212


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 DLPNEEVKEL 10
D P EEV+ L
Sbjct: 83 DAPREEVRRL 92


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 1 DLPNEEVKEL 10
+LP EEV++L
Sbjct: 199 ELPEEEVEKL 208


>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 2 LPNEEVKEL 10
PNEE+K L
Sbjct: 102 FPNEEIKVL 110


>sp|RS13_METBF|SMALL ribosomal subunit protein uS13|Methanosarcina barkeri (strain

Query: 2 LPNEEVKEL 10
LP+EEV +L
Sbjct: 70 LPDEEVAKL 78


>sp|PSB1_HALMA|PROTEASOME subunit beta 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DLPNEEVKEL 10
D+ NEE KE+
Sbjct: 191 DMTNEEAKEV 200


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 DLPNEEVKEL 10
DLP E +KE+
Sbjct: 1112 DLPEEALKEI 1121


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPNEEVKEL 10
+P+EE+K L
Sbjct: 246 MPSEEIKSL 254


>sp|RS13_METMA|SMALL ribosomal subunit protein uS13|Methanosarcina mazei (strain ATCC

Query: 2 LPNEEVKEL 10
LP+EEV +L
Sbjct: 70 LPDEEVAKL 78


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 4 NEEVKEL 10
NEEVKEL
Sbjct: 522 NEEVKEL 528


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LPNEEVKEL 10
P E+VKEL
Sbjct: 306 FPKEDVKEL 314


>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 1 DLPNEEVKE 9
DLPNE+ E
Sbjct: 115 DLPNEDTFE 123


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 2 LPNEEVKEL 10
+PNEEV L
Sbjct: 263 IPNEEVGTL 271


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLPNEEVKEL 10
D NEE+KEL
Sbjct: 145 DYENEELKEL 154


>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DLPNEEV 7
DLPN E+
Sbjct: 251 DLPNSEI 257


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LPNEEVKEL 10
LP+EE+K +
Sbjct: 442 LPDEELKRI 450


>sp|RNP2_PYRHO|RIBONUCLEASE P protein component 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLPNEEVKEL 10
D +EVKEL
Sbjct: 28 DFTKDEVKEL 37




149|Sequence|741|750|EVKELIRQQN

>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VKELIRQQ 9
+KE IRQQ
Sbjct: 74 IKEAIRQQ 81


>sp|RADA_PYRCJ|DNA repair and recombination protein|Pyrobaculum calidifontis (strain

Query: 1 EVKELIRQQN 10
+ K LIRQ N
Sbjct: 205 QAKSLIRQHN 214


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KELIRQQ 9
KELIRQ+
Sbjct: 61 KELIRQE 67


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 EVKELIRQ 8
EVKEL++Q
Sbjct: 411 EVKELLKQ 418


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 4 ELIRQQN 10
ELIRQ+N
Sbjct: 216 ELIRQKN 222


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 4 ELIRQQN 10
ELIRQ+N
Sbjct: 219 ELIRQKN 225


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 4 ELIRQQN 10
ELIRQ+N
Sbjct: 216 ELIRQKN 222


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 4 ELIRQQN 10
ELIRQ+N
Sbjct: 216 ELIRQKN 222


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EVKELIRQ 8
EVKEL++Q
Sbjct: 411 EVKELLKQ 418


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 4 ELIRQQN 10
ELIRQ+N
Sbjct: 216 ELIRQKN 222


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 4 ELIRQQN 10
ELIRQ+N
Sbjct: 205 ELIRQKN 211


>sp|SRP54_THEON|SIGNAL recognition particle 54 kDa|Thermococcus onnurineus (strain NA1)

Query: 1 EVKELIRQQN 10
EV+EL+ Q N
Sbjct: 411 EVRELLHQYN 420


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 1 EVKELIRQ 8
EV+ELIR+
Sbjct: 498 EVRELIRE 505




150|Sequence|746|755|IRQQNWDSLI

>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 1 IRQQNWDSL 9
I++QNW+++
Sbjct: 51 IKKQNWETM 59


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 1 IRQQNWDSLI 10
I+Q+N DSLI
Sbjct: 271 IKQKNLDSLI 280


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 IRQQNWDSL 9
+ ++NWD+L
Sbjct: 49 VEKKNWDTL 57


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RQQNWDSLI 10
R +NWDS++
Sbjct: 717 RLKNWDSIL 725


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IRQQNWDSL 9
IR+ NW+ L
Sbjct: 394 IREYNWNYL 402


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 IRQQNWDSL 9
+RQ WD L
Sbjct: 99 MRQWGWDEL 107


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 QNWDSLI 10
+NW+SL+
Sbjct: 225 ENWESLV 231


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RQQNWDSLI 10
+ + WDSL+
Sbjct: 197 KSREWDSLV 205


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 1 IRQQNWDSLI 10
++ WDSL+
Sbjct: 274 LKMNGWDSLL 283




151|Sequence|751|760|WDSLIAGDQL

>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 1 WDSLIAGDQL 10
WD++I GD L
Sbjct: 313 WDTIIVGDDL 322


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 1 WDSLIAGDQL 10
WD++I GD L
Sbjct: 314 WDTIIVGDDL 323


>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 1 WDSLIAGDQL 10
WD++I GD L
Sbjct: 313 WDTIIVGDDL 322


>sp|ENO_METBU|ENOLASE burtonii (strain DSM 6242

Query: 1 WDSLIAGDQL 10
WD++I GD L
Sbjct: 310 WDTIIVGDDL 319


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DSLIAGDQL 10
DSL+ GDQ+
Sbjct: 373 DSLVEGDQI 381


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 3 SLIAGDQL 10
S+I+GDQL
Sbjct: 153 SVISGDQL 160


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WDSLIAGD 8
WD ++AG+
Sbjct: 231 WDKMLAGE 238


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 WDSLIAGDQL 10
WD + GD +
Sbjct: 277 WDQAVPGDNI 286


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 2 DSLIAGDQL 10
D+LI GD L
Sbjct: 295 DTLICGDDL 303


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 WDSLIAGD 8
WD ++ GD
Sbjct: 232 WDRMLRGD 239


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DSLIAGDQL 10
DSL++ DQ+
Sbjct: 36 DSLLSADQI 44


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 2 DSLIAGDQL 10
DS+++GD L
Sbjct: 66 DSILSGDDL 74


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain

Query: 2 DSLIAGDQL 10
DS++ GD L
Sbjct: 39 DSILVGDSL 47


>sp|SURE_HALSA|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 700922

Query: 1 WDSLIAGD 8
W+++ AGD
Sbjct: 210 WEAMAAGD 217


>sp|SURE_HALS3|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 29341

Query: 1 WDSLIAGD 8
W+++ AGD
Sbjct: 210 WEAMAAGD 217




152|Sequence|756|765|AGDQLINQKN

>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDQLINQK 9
G+QLIN+K
Sbjct: 290 GEQLINKK 297


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 AGDQLINQ 8
+GDQLIN
Sbjct: 156 SGDQLINH 163


>sp|RL5_METLZ|LARGE ribosomal subunit protein uL5|Methanocorpusculum labreanum

Query: 1 AGDQLINQKN 10
AG++L+N +N
Sbjct: 21 AGERLVNAEN 30


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GDQLINQKN 10
GD ++N KN
Sbjct: 444 GDVVVNSKN 452


>sp|Y941_ARCFU|UNCHARACTERIZED protein AF_0941|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GDQLINQKN 10
D+L++QKN
Sbjct: 24 ADKLLDQKN 32




153|Sequence|761|770|INQKNAGQVF

***** No hits found ******


154|Sequence|766|775|AGQVFRGFLE

>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 QVFRGFLE 10
QVFR FLE
Sbjct: 58 QVFREFLE 65


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 4 VFRGFLE 10
V+RGFLE
Sbjct: 51 VYRGFLE 57


>sp|KCY_METLZ|CYTIDYLATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AGQVFRGF 8
AG+VFRG
Sbjct: 31 AGEVFRGL 38


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 AGQVFRGFLE 10
AG+VF G LE
Sbjct: 311 AGRVFSGTLE 320


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 AGQVFRGFLE 10
AG+VF G LE
Sbjct: 311 AGRVFSGTLE 320


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 AGQVFRGFLE 10
AG+VF G LE
Sbjct: 312 AGRVFSGTLE 321


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 AGQVFRGFLE 10
AG+VF G LE
Sbjct: 311 AGRVFSGTLE 320


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QVFRGF 8
Q+FRGF
Sbjct: 290 QIFRGF 295


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QVFRGF 8
Q+FRGF
Sbjct: 290 QIFRGF 295


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QVFRGF 8
Q+FRGF
Sbjct: 290 QIFRGF 295


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 3 QVFRGF 8
Q+FRGF
Sbjct: 290 QIFRGF 295


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 AGQVFRGF 8
G+VFRG+
Sbjct: 762 GGRVFRGY 769


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 AGQVFRGFLE 10
AGQ FR ++E
Sbjct: 528 AGQTFRQWVE 537


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 AGQVFRGFLE 10
AG+ ++ FLE
Sbjct: 259 AGETYKQFLE 268


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AGQVFRGFLE 10
AG+VF G +E
Sbjct: 312 AGRVFSGTIE 321


>sp|RL15E_METTH|LARGE ribosomal subunit protein eL15|Methanothermobacter

Query: 2 GQVFRGFL 9
G+VFRG +
Sbjct: 155 GRVFRGLI 162


>sp|RL22_METBF|LARGE ribosomal subunit protein uL22|Methanosarcina barkeri (strain

Query: 2 GQVFRGFL 9
G+V RGF+
Sbjct: 119 GRVIRGFM 126


>sp|Y1078_METJA|UPF0104 membrane protein MJ1078|Methanocaldococcus jannaschii (strain

Query: 2 GQVFRGFL 9
G V+RG+L
Sbjct: 12 GDVYRGYL 19




155|Sequence|771|780|RGFLEGKVTF

>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain

Query: 1 RGFLEGKVT 9
R F+EGK T
Sbjct: 32 RAFIEGKTT 40


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 RGFLEGK 7
RG++EGK
Sbjct: 507 RGYIEGK 513


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RGFLEG 6
RGF+EG
Sbjct: 497 RGFIEG 502


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFLEGKV 8
GF+EGKV
Sbjct: 211 GFIEGKV 217


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FLEGKVT 9
F+EGK+T
Sbjct: 392 FVEGKIT 398


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 FLEGKVT 9
F+EGK+T
Sbjct: 401 FVEGKIT 407


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 RGFLEGKVT 9
R FL GKVT
Sbjct: 11 RAFLGGKVT 19


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RGFLEGK 7
RG++EGK
Sbjct: 880 RGYIEGK 886


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGFLEGK 7
RG++EGK
Sbjct: 507 RGYIEGK 513


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 1 RGFLEGKVTF 10
R F+EGK+ +
Sbjct: 279 RQFVEGKLVY 288


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 RGFLEGKV 8
RG+ EGKV
Sbjct: 100 RGYPEGKV 107


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 EGKVTF 10
EGK+TF
Sbjct: 594 EGKITF 599


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RGFLEGKVTF 10
RG + G++TF
Sbjct: 42 RGLVTGRLTF 51


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFLEGKVTF 10
G +EG +TF
Sbjct: 198 GIVEGTITF 206


>sp|Y695_THEPD|UPF0201 protein Tpen_0695|Thermofilum pendens (strain DSM 2475

Query: 1 RGFLEGKVTF 10
RG EG+V F
Sbjct: 76 RGLREGEVKF 85




156|Sequence|776|785|GKVTFAPTYK

>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 GKVTFAPT 8
GK+T+ PT
Sbjct: 233 GKITYTPT 240


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 3 VTFAPTY 9
VTFAP Y
Sbjct: 218 VTFAPIY 224


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 VTFAPTYK 10
V F PTYK
Sbjct: 142 VDFNPTYK 149


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 1 GKVTFAPTYK 10
GK+TF YK
Sbjct: 325 GKITFRTIYK 334


>sp|UPPS_SULTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Sulfurisphaera

Query: 1 GKVTFAPTYK 10
GK+ P YK
Sbjct: 7 GKIILYPVYK 16


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVTFAPT 8
KVT APT
Sbjct: 99 KVTLAPT 105


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GKVTFAPTY 9
G+V F P Y
Sbjct: 383 GRVKFRPAY 391


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 GKVTFAP 7
GK+T AP
Sbjct: 2 GKITIAP 8




157|Sequence|781|790|APTYKYDLFS

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 PTYKYDL 8
P YK+DL
Sbjct: 199 PQYKFDL 205


>sp|RS4_NATPD|SMALL ribosomal subunit protein uS4|Natronomonas pharaonis (strain ATCC

Query: 1 APTYKYDL 8
AP+YK D+
Sbjct: 141 APSYKVDV 148


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 PTYKYDLFS 10
PT +YD F+
Sbjct: 281 PTSEYDAFT 289


>sp|RNZ_THESM|RIBONUCLEASE Z|Thermococcus sibiricus (strain DSM 12597

Query: 1 APTYKYDLF 9
AP YKY+ +
Sbjct: 265 APRYKYEEY 273


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PTYKYDLFS 10
P Y Y LFS
Sbjct: 75 PAYIYKLFS 83




158|Sequence|786|795|YDLFSDDYDT

>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLFSDDYD 9
++FSDDY+
Sbjct: 95 EIFSDDYN 102


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 2 DLFSDDYD 9
++FSDDY+
Sbjct: 93 EVFSDDYN 100


>sp|RS17E_METTH|SMALL ribosomal subunit protein eS17|Methanothermobacter

Query: 4 FSDDYDT 10
F+DD+DT
Sbjct: 24 FTDDFDT 30


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DLFSDDYD 9
+LF DD+D
Sbjct: 30 NLFGDDFD 37


>sp|RS17E_METJA|SMALL ribosomal subunit protein eS17|Methanocaldococcus jannaschii

Query: 2 DLFSDDYDT 10
DLF+ D++T
Sbjct: 22 DLFTTDFET 30


>sp|FEN_KORCO|FLAP endonuclease 1|Korarchaeum cryptofilum (strain OPF8)

Query: 5 SDDYDT 10
+DDYDT
Sbjct: 289 TDDYDT 294


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLFSDDYD 9
D SDDYD
Sbjct: 118 DRISDDYD 125


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 YDLFSDD 7
YDLF D+
Sbjct: 988 YDLFEDE 994


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 4 FSDDYDT 10
F+D+YDT
Sbjct: 139 FADNYDT 145


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YDLFSDDYDT 10
YD DD++T
Sbjct: 358 YDAMDDDFNT 367


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 YDLFSDDYDT 10
YD DD++T
Sbjct: 358 YDAMDDDFNT 367


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YDLFSDDYDT 10
YD DD++T
Sbjct: 358 YDAMDDDFNT 367


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 YDLFSDDYD 9
Y FSD+Y+
Sbjct: 812 YVYFSDEYE 820


>sp|Y356_ARCFU|UNCHARACTERIZED sugar kinase AF_0356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LFSDDYDT 10
LFS+DY T
Sbjct: 150 LFSEDYRT 157


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 YDLFSDDY 8
YDL +DD+
Sbjct: 126 YDLLTDDF 133


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 6 DDYDT 10
DDYDT
Sbjct: 84 DDYDT 88


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLFSDDYDT 10
DL DDYDT
Sbjct: 349 DLDEDDYDT 357


>sp|TRPD_HALSA|ANTHRANILATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 6 DDYDT 10
DDYDT
Sbjct: 82 DDYDT 86


>sp|TRPD_HALS3|ANTHRANILATE phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 6 DDYDT 10
DDYDT
Sbjct: 82 DDYDT 86


>sp|PURO_HALSA|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DLFSDDYDT 10
D DDYDT
Sbjct: 96 DYEKDDYDT 104


>sp|PURO_HALS3|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DLFSDDYDT 10
D DDYDT
Sbjct: 96 DYEKDDYDT 104




159|Sequence|791|800|DDYDTSEKCR

>sp|FEN_KORCO|FLAP endonuclease 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DDYDTSEK 8
DDYDTS K
Sbjct: 290 DDYDTSLK 297


>sp|RSMA_PYRIL|PROBABLE ribosomal RNA small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YDTSEKCR 10
+DT+E CR
Sbjct: 227 FDTTETCR 234


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 DDYDTSEKC 9
DD +T EKC
Sbjct: 93 DDIETHEKC 101


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 1 DDYDTSEKCR 10
++YD EKC+
Sbjct: 231 NNYDKDEKCK 240


>sp|CARB2_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 DYDTSEK 8
DYDTS+K
Sbjct: 134 DYDTSDK 140


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 DYDTSEK 8
DYDTS+K
Sbjct: 598 DYDTSDK 604


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain

Query: 2 DYDTSEK 8
DYDTS+K
Sbjct: 52 DYDTSDK 58


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YDTSEKCR 10
YDT ++CR
Sbjct: 717 YDTIKRCR 724


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DYDTSEKCR 10
+Y T EKC+
Sbjct: 234 NYKTDEKCK 242


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 YDTSEKCR 10
YDT ++CR
Sbjct: 716 YDTIKRCR 723


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YDTSEKCR 10
YDT ++CR
Sbjct: 716 YDTIKRCR 723


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YDTSEKCR 10
YDT ++CR
Sbjct: 719 YDTLKRCR 726


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain

Query: 2 DYDTSEKCR 10
DY S+ CR
Sbjct: 27 DYSASQACR 35


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 DYDTSEK 8
DYDTS++
Sbjct: 610 DYDTSDR 616


>sp|SPSS2_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanoregula boonei (strain DSM 21154

Query: 1 DDYDTSEKCR 10
D Y T + CR
Sbjct: 102 DGYSTCDACR 111


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DDYDTSEKC 9
+DY+ EKC
Sbjct: 187 EDYENLEKC 195


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DDYDTSEK 8
DDY+ +EK
Sbjct: 92 DDYELAEK 99


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDYDTS 6
DDYDTS
Sbjct: 353 DDYDTS 358


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 DDYDTSEKCR 10
D Y T + CR
Sbjct: 108 DGYSTCDNCR 117


>sp|RL24_PYRIL|LARGE ribosomal subunit protein uL24|Pyrobaculum islandicum (strain DSM

Query: 2 DYDTSEKCR 10
D DTS+K R
Sbjct: 105 DIDTSDKIR 113


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 DYDTSEK 8
D+DTS+K
Sbjct: 595 DFDTSDK 601


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 DYDTSEK 8
D+DTS+K
Sbjct: 595 DFDTSDK 601


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 DDYDTSEKCR 10
D Y T + CR
Sbjct: 110 DGYSTCDYCR 119


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5

Query: 3 YDTSEKCR 10
YD +E CR
Sbjct: 25 YDLAEGCR 32


>sp|RS17E_METTH|SMALL ribosomal subunit protein eS17|Methanothermobacter

Query: 1 DDYDTSEK 8
DD+DT++K
Sbjct: 26 DDFDTNKK 33


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DDYDTSEKC 9
D YDT +C
Sbjct: 193 DMYDTLNRC 201


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 DYDTSEK 8
D+DTS+K
Sbjct: 596 DFDTSDK 602


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DDYDTSEKCR 10
D Y T + CR
Sbjct: 102 DGYSTCDTCR 111


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DDYDTSEKC 9
D Y EKC
Sbjct: 64 DTYSVEEKC 72


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYDTSEKC 9
+YD S KC
Sbjct: 780 EYDESNKC 787


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 1 DDYDTSEKCR 10
D YD+ CR
Sbjct: 51 DPYDSETVCR 60




160|Sequence|796|805|SEKCRTPAWT

>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCKTPFWT 32


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCKTPFWT 32


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCKTPFWT 32


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCKTPFWT 32


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCKTPFWT 32


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCKTPFWT 32


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EKCRTPAWT 10
+ C+TP WT
Sbjct: 24 KSCQTPFWT 32


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 CRTPAWT 10
C+TP WT
Sbjct: 27 CQTPFWT 33


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 CRTPAWT 10
C TP WT
Sbjct: 27 CSTPFWT 33


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 CRTPAWT 10
C+TP W+
Sbjct: 26 CKTPFWS 32


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 CRTPA 8
CRTPA
Sbjct: 307 CRTPA 311




161|Sequence|801|810|TPAWTDRVLW

>sp|RNP4_METPE|RIBONUCLEASE P protein component 4|Methanosphaerula palustris (strain ATCC

Query: 2 PAWTDR 7
PAW+DR
Sbjct: 33 PAWSDR 38


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TPAWTDRVLW 10
TP W RV++
Sbjct: 379 TPEWGRRVIY 388


>sp|HIS6_METMA|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina mazei (strain

Query: 1 TPAWTDRVLW 10
TPAW + V++
Sbjct: 156 TPAWYEVVIY 165


>sp|HIS6_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 1 TPAWTDRVLW 10
TPAW + V++
Sbjct: 156 TPAWYEVVIY 165


>sp|HIS6_METAR|IMIDAZOLE glycerol phosphate synthase subunit|Methanocella arvoryzae (strain

Query: 1 TPAWTDRVLW 10
TPAW + V++
Sbjct: 156 TPAWYEVVIY 165


>sp|HIS6_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 1 TPAWTDRVLW 10
TPAW + V++
Sbjct: 156 TPAWYEVVIY 165


>sp|FTR_METJA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PAWTDRVL 9
P W RVL
Sbjct: 17 PIWVSRVL 24


>sp|MTBC_METBA|DIMETHYLAMINE corrinoid protein|Methanosarcina barkeri

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 185 TQAWADKI 192


>sp|MTBC3_METMA|DIMETHYLAMINE corrinoid protein 3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 139 TQAWADKI 146


>sp|MTBC3_METAC|DIMETHYLAMINE corrinoid protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 185 TQAWADKI 192


>sp|MTBC2_METMA|DIMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 186 TQAWADKI 193


>sp|MTBC2_METAC|DIMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 186 TQAWADKI 193


>sp|MTBC1_METMA|DIMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 186 TQAWADKI 193


>sp|MTBC1_METAC|DIMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 185 TQAWADKI 192


>sp|MTBC_METTE|DIMETHYLAMINE corrinoid protein|Methanosarcina thermophila

Query: 1 TPAWTDRV 8
T AW D++
Sbjct: 31 TQAWADKI 38




162|Sequence|806|815|DRVLWRRRKW

>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RVLWRRRKW 10
RVL+R +KW
Sbjct: 176 RVLFREKKW 184


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 LWRRRKW 10
+WR+ KW
Sbjct: 1 MWRQAKW 7


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 VLWRRRKW 10
++WR+ KW
Sbjct: 1 MVWRQAKW 8


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 VLWRRRKW 10
++WR+ KW
Sbjct: 1 MVWRQAKW 8


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 VLWRRRKW 10
++WR+ KW
Sbjct: 1 MVWRQAKW 8


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 VLWRRRKW 10
++WR+ KW
Sbjct: 1 MVWRQAKW 8


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 VLWRRRKW 10
++WR+ KW
Sbjct: 1 MVWRQAKW 8


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 VLWRRRKW 10
++WR+ KW
Sbjct: 1 MVWRQAKW 8


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DRVLWRRRK 9
D VLW++RK
Sbjct: 178 DFVLWKKRK 186


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 RVLWRRRKW 10
RVL++ R W
Sbjct: 173 RVLFKERGW 181


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 RVLWRRRKW 10
R++W +W
Sbjct: 115 RIMWELEQW 123


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 DRVLWRRRKW 10
DR+L R KW
Sbjct: 314 DRMLSIRNKW 323


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LWRRR 8
LWRRR
Sbjct: 250 LWRRR 254


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 4 LWRRRK 9
LWRRRK
Sbjct: 66 LWRRRK 71


>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RVLWRRRK 9
R LWRRR+
Sbjct: 159 RYLWRRRR 166


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RVLWRRRK 9
R LWRRR+
Sbjct: 159 RYLWRRRR 166


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 4 LWRRRKW 10
L+R RKW
Sbjct: 465 LYRLRKW 471


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DRVLW 5
DRVLW
Sbjct: 98 DRVLW 102


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 1 DRVLWRRRK 9
D LW RR+
Sbjct: 351 DEPLWHRRE 359


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 LWRRRKW 10
+WR+ +W
Sbjct: 1 MWRQSRW 7




163|Sequence|811|820|RRRKWPFDRS

>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 358 RWPFDK 363


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 355 RWPFDK 360


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 355 RWPFDK 360


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 355 RWPFDK 360


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 356 RWPFDK 361


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 355 RWPFDK 360


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 356 RWPFDK 361


>sp|RNH2_NANEQ|RIBONUCLEASE HII|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RRKWPFD 8
R+KWPF+
Sbjct: 185 RKKWPFE 191


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 4 KWPFDR 9
+WPFD+
Sbjct: 357 RWPFDK 362


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 RKWPFDRS 10
R WP D S
Sbjct: 259 RSWPLDHS 266


>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 4 KWPFDR 9
KWP DR
Sbjct: 218 KWPIDR 223


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 3 RKWPFD 8
R WPFD
Sbjct: 176 RYWPFD 181


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 5 WPFD 8
WPFD
Sbjct: 140 WPFD 143


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 5 WPFD 8
WPFD
Sbjct: 142 WPFD 145


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 4 KWPFD 8
+WPFD
Sbjct: 167 EWPFD 171


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RRKWPFD 8
RR+W +D
Sbjct: 393 RREWEYD 399


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 5 WPFD 8
WPFD
Sbjct: 142 WPFD 145


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 5 WPFD 8
WPFD
Sbjct: 140 WPFD 143


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RRKWPFDR 9
+R+W F+R
Sbjct: 18 KRRWVFER 25


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RRKWP 6
RR+WP
Sbjct: 325 RRRWP 329


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RRKWPFDR 9
+R+W F+R
Sbjct: 20 KRRWVFER 27




164|Sequence|816|825|PFDRSAEDLD

>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 PFDRSAEDLD 10
P DR+AE+ D
Sbjct: 260 PMDRAAEEGD 269


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 PFDRSAEDL 9
PF++ EDL
Sbjct: 30 PFNKKPEDL 38


>sp|Y423_THESM|UPF0292 protein TSIB_0423|Thermococcus sibiricus (strain DSM 12597

Query: 2 FDRSAEDL 9
FDR EDL
Sbjct: 70 FDRKGEDL 77


>sp|DNAG_HALMA|DNA primase DnaG|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFDRSAEDL 9
P D+S EDL
Sbjct: 239 PSDKSVEDL 247


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 PFDRSAEDLD 10
P++RSA +LD
Sbjct: 201 PYERSAFELD 210


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 1 PFDRSAEDL 9
P++R EDL
Sbjct: 34 PYERKIEDL 42


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FDRSAEDLD 10
FDR DLD
Sbjct: 187 FDRGGLDLD 195




165|Sequence|821|830|AEDLDLLNAS

>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AEDLDLLNA 9
AED D+LN
Sbjct: 22 AEDTDILNG 30


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 EDLDLLN 8
EDLD+LN
Sbjct: 11 EDLDILN 17


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 1 AEDLDLLNA 9
A+DLDLL +
Sbjct: 217 AKDLDLLKS 225


>sp|Y964_METJA|UNCHARACTERIZED protein MJ0964|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EDLDLLNA 9
ED++L+NA
Sbjct: 586 EDIELVNA 593


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 AEDLDLLNA 9
AED D+LN
Sbjct: 22 AEDTDVLNG 30


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 DLDLLNAS 10
D+D++NAS
Sbjct: 128 DMDVVNAS 135


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 DLDLLNAS 10
D+D++NAS
Sbjct: 128 DMDVVNAS 135


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 DLDLLNAS 10
D+D++NAS
Sbjct: 128 DMDVVNAS 135


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 DLDLLNAS 10
D+D++NAS
Sbjct: 128 DMDVVNAS 135


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 DLDLLNAS 10
D+D++NAS
Sbjct: 128 DMDVVNAS 135


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 3 DLDLLNAS 10
D+D++NAS
Sbjct: 128 DMDVVNAS 135




166|Sequence|826|835|LLNASFQDES

***** No hits found ******


167|Sequence|831|840|FQDESKILYT

>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 FQDESKILYT 10
F D KI+YT
Sbjct: 380 FTDPEKIVYT 389


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 FQDESKILYT 10
F D KI+YT
Sbjct: 380 FTDPEKIVYT 389


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 3 DESKILYT 10
DE +ILYT
Sbjct: 549 DEGEILYT 556


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 3 DESKILYT 10
DE ILYT
Sbjct: 553 DEGDILYT 560


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DESKILY 9
DE K+LY
Sbjct: 158 DEKKVLY 164


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 DESKILY 9
DE KILY
Sbjct: 67 DEDKILY 73




168|Sequence|836|845|KILYTWTPGT

>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 TWTPGT 10
TW PGT
Sbjct: 220 TWGPGT 225


>sp|COXX_SACS2|PROTOHEME IX farnesyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 LYTWTPG 9
L TW PG
Sbjct: 255 LQTWAPG 261


>sp|COXX_SACI6|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|COXX_SACI4|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|COXX_SACI3|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|COXX_SACI2|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|COXX_SACI1|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|COXX_SACI7|PROTOHEME IX farnesyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|COXX_SULTO|PROTOHEME IX farnesyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 187 LIFMWTPG 194


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 6 WTPGT 10
WTPG+
Sbjct: 38 WTPGS 42


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ILYTWTPG 9
+++ WTPG
Sbjct: 171 LIFMWTPG 178


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 2 ILYTWTPG 9
+L+ W PG
Sbjct: 184 LLHDWKPG 191


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 KILYTWTPG 9
K+L+T+T G
Sbjct: 167 KVLHTYTAG 175


>sp|COXX_SULAC|PROTOHEME IX farnesyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LYTWTPG 9
++ WTPG
Sbjct: 172 VFAWTPG 178


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 TWTPG 9
+WTPG
Sbjct: 190 SWTPG 194


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 TWTPG 9
+WTPG
Sbjct: 192 SWTPG 196


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 TWTPG 9
+WTPG
Sbjct: 190 SWTPG 194


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KILYTW 6
K+LY W
Sbjct: 247 KVLYVW 252


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 TWTPG 9
+WTPG
Sbjct: 190 SWTPG 194


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LYTWTPG 9
+Y W PG
Sbjct: 56 IYDWKPG 62


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 KILYTW 6
K+LY W
Sbjct: 250 KVLYVW 255


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KILYTW 6
K+LY W
Sbjct: 249 KVLYVW 254


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KILYTW 6
K+LY W
Sbjct: 250 KVLYVW 255


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KILYTW 6
K+LY W
Sbjct: 249 KVLYVW 254


>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILYTWTP 8
++YTW P
Sbjct: 103 MIYTWVP 109


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KILYTW 6
K+LY W
Sbjct: 249 KVLYVW 254




169|Sequence|841|850|WTPGTLLHYG

>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 WTPGTLLHYG 10
W P +HYG
Sbjct: 311 WEPPVFIHYG 320


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WTPGTLLHYG 10
W P +HYG
Sbjct: 312 WEPPEFIHYG 321


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WTPGTLLHYG 10
WT T++H+G
Sbjct: 320 WTMPTVIHFG 329


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WTPGTLLHYG 10
W P +L YG
Sbjct: 152 WAPKNVLFYG 161


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WTPGTLLHYG 10
W P +H+G
Sbjct: 324 WRPPYFIHFG 333


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 317 WKPPVYRHYG 326


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 TPGTLL 7
TPGTLL
Sbjct: 101 TPGTLL 106


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 TPGTLL 7
TPGTLL
Sbjct: 101 TPGTLL 106


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WTPGTLL 7
W PGT++
Sbjct: 221 WGPGTII 227


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PGTLLHYG 10
PG LL YG
Sbjct: 382 PGFLLFYG 389


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 WTPGTLLHYG 10
W P +H+G
Sbjct: 325 WKPPVSIHFG 334


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 GTLLHY 9
GT+LHY
Sbjct: 56 GTVLHY 61


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 69 WWPADFGHYG 78


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 3 PGTLLHYG 10
PG L+H G
Sbjct: 133 PGKLVHIG 140


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 3 PGTLLHYG 10
PG L+H G
Sbjct: 133 PGKLVHIG 140


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGTLLHYG 10
PG L+H G
Sbjct: 133 PGKLVHIG 140


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 3 PGTLLHYG 10
PG L+H G
Sbjct: 133 PGKLVHIG 140


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PGTLLHYG 10
PG+L H G
Sbjct: 136 PGSLTHQG 143


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 3 PGTLLHYG 10
PG L+H G
Sbjct: 130 PGRLVHMG 137


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PGTLLHYG 10
PGTLL G
Sbjct: 224 PGTLLRRG 231


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PGTLLHY 9
P TL HY
Sbjct: 151 PSTLAHY 157


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 84 WWPADFGHYG 93


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 4 GTLLHYG 10
GTL+H G
Sbjct: 218 GTLMHIG 224


>sp|KATG2_HALMA|CATALASE-PEROXIDASE 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 78 WWPADYGHYG 87


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 79 WWPADFGHYG 88


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 60 WWPADYGHYG 69


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 75 WWPADYGHYG 84


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 79 WWPADFGHYG 88


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 65 WWPADYGHYG 74


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 WTPGTLLHYG 10
W P HYG
Sbjct: 65 WWPADYGHYG 74




170|Sequence|846|855|LLHYGRAELK

>sp|RS9_HALSA|SMALL ribosomal subunit protein uS9|Halobacterium salinarum (strain

Query: 3 HYGRAELK 10
HYG AEL+
Sbjct: 88 HYGDAELR 95


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LLHYGRAEL 9
L+ YGRAE+
Sbjct: 267 LITYGRAEV 275


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 LHYGRAELK 10
LH GRA++K
Sbjct: 17 LHDGRADVK 25


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 HYGRAELK 10
H G+AELK
Sbjct: 17 HNGKAELK 24


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 HYGRAELK 10
H G+AELK
Sbjct: 7 HSGKAELK 14


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 4 YGRAELK 10
YG+AELK
Sbjct: 206 YGKAELK 212


>sp|KCY_METTH|CYTIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HYGRAELK 10
H+ RA+LK
Sbjct: 86 HFARADLK 93


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 4 YGRAELK 10
YGR E+K
Sbjct: 223 YGRVEIK 229


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 1 LLHYGRAELK 10
+LH+G +LK
Sbjct: 120 VLHHGPTDLK 129


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 1 LLHYGRAELK 10
+LH+G +LK
Sbjct: 120 VLHHGPTDLK 129


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LLHYGRAELK 10
+LH+G +LK
Sbjct: 120 VLHHGPTDLK 129


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LHYGRAELK 10
LH G+A+LK
Sbjct: 17 LHGGKAQLK 25




171|Sequence|851|860|RAELKTSDHR

>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 1 RAELKTSDHR 10
R +KTSDHR
Sbjct: 273 RPLIKTSDHR 282


>sp|F16A1_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 RAELKTSDHR 10
RA++KT+D R
Sbjct: 80 RADVKTTDGR 89


>sp|Y745_METJA|UNCHARACTERIZED protein MJ0745|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RAELKTSDHR 10
R ELKT D +
Sbjct: 5 RVELKTKDMK 14


>sp|KORC_METTH|2-OXOGLUTARATE synthase subunit KorC|Methanothermobacter thermautotrophicus

Query: 1 RAELKTSDH 9
RAE+ SDH
Sbjct: 53 RAEVVISDH 61




172|Sequence|856|865|TSDHRPVVAL

>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 3 DHRPVVAL 10
+HRP VAL
Sbjct: 55 EHRPGVAL 62


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 3 DHRPVVA 9
DH PV+A
Sbjct: 15 DHMPVIA 21


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 3 DHRPVVA 9
DH PV+A
Sbjct: 15 DHMPVIA 21


>sp|BACS1_HALMA|SENSORY rhodopsin I|Haloarcula marismortui (strain ATCC 43049

Query: 2 SDHRPVVA 9
SD RP++A
Sbjct: 32 SDERPILA 39




173|Sequence|861|870|PVVALIDIDI

>sp|Y1463_METJA|UPF0128 protein MJ1463|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVVALIDIDI 10
P +AL D+DI
Sbjct: 209 PTIALFDLDI 218


>sp|RS2_PYRCJ|SMALL ribosomal subunit protein uS2|Pyrobaculum calidifontis (strain DSM

Query: 1 PVVALIDID 9
PVVAL+D D
Sbjct: 142 PVVALVDTD 150


>sp|RS2_PYRNV|SMALL ribosomal subunit protein uS2|Pyrobaculum neutrophilum (strain DSM

Query: 1 PVVALIDID 9
PVVAL+D D
Sbjct: 141 PVVALVDTD 149


>sp|RS2_PYRAE|SMALL ribosomal subunit protein uS2|Pyrobaculum aerophilum (strain ATCC

Query: 1 PVVALIDID 9
PV+AL+D D
Sbjct: 142 PVIALVDTD 150


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 1 PVVALIDIDI 10
P+ LID+D+
Sbjct: 118 PIADLIDVDL 127


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 1 PVVALIDID 9
PV+AL+D D
Sbjct: 147 PVIALVDTD 155


>sp|RS2_PYRAR|SMALL ribosomal subunit protein uS2|Pyrobaculum arsenaticum (strain DSM

Query: 1 PVVALIDID 9
PV+AL+D D
Sbjct: 142 PVIALVDTD 150


>sp|RS2_AERPE|SMALL ribosomal subunit protein uS2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVVALIDID 9
PVVAL+D D
Sbjct: 139 PVVALVDTD 147


>sp|RS2_KORCO|SMALL ribosomal subunit protein uS2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PVVALIDID 9
PVVAL+D D
Sbjct: 150 PVVALVDAD 158


>sp|RS2_PYRIL|SMALL ribosomal subunit protein uS2|Pyrobaculum islandicum (strain DSM

Query: 1 PVVALIDID 9
P++AL+D D
Sbjct: 142 PIIALVDTD 150


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 1 PVVALIDID 9
PVVAL D D
Sbjct: 150 PVVALTDTD 158


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 1 PVVALIDID 9
PVVAL+D+
Sbjct: 23 PVVALVDVS 31


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 PVVALIDID 9
P VAL+D+D
Sbjct: 160 PGVALVDLD 168


>sp|CUTA_THEKO|DIVALENT-CATION tolerance protein CutA|Thermococcus kodakarensis (strain ATCC

Query: 1 PVVALIDID 9
P++A ID+D
Sbjct: 80 PMIARIDLD 88


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 2 VVALIDIDI 10
VVAL+D+D+
Sbjct: 124 VVALVDMDV 132


>sp|Y2154_ARCFU|UPF0179 protein AF_2154|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVVALIDIDI 10
P++AL+D I
Sbjct: 79 PIIALVDSKI 88


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 1 PVVALIDID 9
PV+AL+D+
Sbjct: 23 PVIALVDVS 31


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 1 PVVALIDIDI 10
P+V L+ ID+
Sbjct: 159 PIVRLVAIDL 168


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 1 PVVALIDID 9
PV+AL+D+
Sbjct: 23 PVIALVDVS 31


>sp|RS13_METKA|SMALL ribosomal subunit protein uS13|Methanopyrus kandleri (strain AV19

Query: 1 PVVALIDIDI 10
P+V + D+D+
Sbjct: 8 PIVRIADVDL 17


>sp|RL10_THESM|LARGE ribosomal subunit protein uL10|Thermococcus sibiricus (strain DSM

Query: 1 PVVALIDI 8
PV+AL+D+
Sbjct: 23 PVIALVDV 30


>sp|RL10_THEON|LARGE ribosomal subunit protein uL10|Thermococcus onnurineus (strain

Query: 1 PVVALIDI 8
PV+AL+D+
Sbjct: 23 PVIALVDV 30


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 VVALIDIDI 10
VV L+DID+
Sbjct: 119 VVILLDIDV 127


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 PVVALIDIDI 10
P+ LID+D+
Sbjct: 115 PIGDLIDVDV 124


>sp|RL10_THEKO|LARGE ribosomal subunit protein uL10|Thermococcus kodakarensis (strain

Query: 1 PVVALIDI 8
PV+AL+D+
Sbjct: 23 PVIALVDV 30


>sp|RL10_THEGJ|LARGE ribosomal subunit protein uL10|Thermococcus gammatolerans (strain

Query: 1 PVVALIDI 8
PV+AL+D+
Sbjct: 23 PVIALVDV 30


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 1 PVVALIDID 9
P+VAL+D +
Sbjct: 136 PIVALVDTE 144


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 1 PVVALIDID 9
P+VAL+D +
Sbjct: 136 PIVALVDTE 144


>sp|RS2_METKA|SMALL ribosomal subunit protein uS2|Methanopyrus kandleri (strain AV19 /

Query: 1 PVVALIDID 9
P+VAL D D
Sbjct: 138 PIVALCDTD 146


>sp|RS2_THEKO|SMALL ribosomal subunit protein uS2|Thermococcus kodakarensis (strain

Query: 1 PVVALIDID 9
P+VAL+D +
Sbjct: 135 PIVALVDTE 143


>sp|RS2_THEPD|SMALL ribosomal subunit protein uS2|Thermofilum pendens (strain DSM 2475

Query: 1 PVVALIDID 9
PV+AL D D
Sbjct: 144 PVIALCDTD 152


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 1 PVVALIDID 9
P+VAL+D +
Sbjct: 136 PIVALVDTE 144


>sp|RS2_METLZ|SMALL ribosomal subunit protein uS2|Methanocorpusculum labreanum (strain

Query: 1 PVVALIDID 9
PV+AL DI+
Sbjct: 144 PVIALCDIN 152


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVVALIDID 9
PVV +D+D
Sbjct: 21 PVVTAVDLD 29


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 PVVALIDID 9
PVV +D+D
Sbjct: 16 PVVTAVDLD 24




174|Sequence|866|875|IDIDIFEVEA

>sp|LEU3_SACS2|3-ISOPROPYLMALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IDIDIFEVEA 10
+DID+ EVEA
Sbjct: 34 LDIDLIEVEA 43


>sp|PURA_NATPD|ADENYLOSUCCINATE synthetase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IDIDIFEVEA 10
ID D F+VEA
Sbjct: 182 IDADAFDVEA 191


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 3 IDIFEVEA 10
ID++EVE+
Sbjct: 452 IDLYEVES 459


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IDIDIFE 7
ID+D+F+
Sbjct: 79 IDVDVFD 85


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDIDIFEVEA 10
+D+D+F VE
Sbjct: 252 LDVDVFVVEG 261


>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IDIDIFEVE 9
ID+D FE E
Sbjct: 189 IDVDQFETE 197




175|Sequence|871|880|FEVEAEERQN

>sp|OTC_PYRIL|ORNITHINE carbamoyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FEVEAEERQ 9
FE EAEER+
Sbjct: 231 FEKEAEERR 239


>sp|OTC_PYRCJ|ORNITHINE carbamoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FEVEAEERQ 9
FE EAEER+
Sbjct: 231 FEKEAEERR 239


>sp|OTC_PYRHO|ORNITHINE carbamoyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EVEAEERQ 9
E EAEER+
Sbjct: 238 EAEAEERR 245


>sp|OTC_PYRAB|ORNITHINE carbamoyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 EVEAEERQ 9
E EAEER+
Sbjct: 238 EAEAEERR 245


>sp|OTC_PYRAE|ORNITHINE carbamoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FEVEAEERQ 9
FE EAEER+
Sbjct: 231 FEKEAEERR 239


>sp|OTCA_PYRFU|ORNITHINE carbamoyltransferase, anabolic|Pyrococcus furiosus (strain ATCC

Query: 2 EVEAEERQ 9
E EAEER+
Sbjct: 238 EAEAEERR 245




176|Sequence|876|885|EERQNIYKEV

>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 EERQNIYKEV 10
EERQN+ K+V
Sbjct: 392 EERQNLEKKV 401


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 RQNIYKEV 10
R+N YKEV
Sbjct: 344 RENTYKEV 351


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 RQNIYKEV 10
R+N YKEV
Sbjct: 344 RENAYKEV 351


>sp|FEN_THEAC|FLAP endonuclease 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RQNIYKEV 10
R+NIYK V
Sbjct: 196 RKNIYKTV 203


>sp|Y3521_METJA|UNCHARACTERIZED protein MJECL21|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EERQNIYKEV 10
+ER+NI KEV
Sbjct: 35 KERKNIEKEV 44


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 2 ERQNIYKEV 10
+++N+YKE+
Sbjct: 484 DKKNLYKEI 492




177|Sequence|881|890|IYKEVIAVQG

>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 188 YKNVIAVEG 196


>sp|DNAG_SULAC|DNA primase DnaG|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YKEVIAVQG 10
YK VIAV+G
Sbjct: 184 YKNVIAVEG 192


>sp|PTH_METKA|PEPTIDYL-TRNA hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 IYKEVIAVQG 10
+YK+VI V+G
Sbjct: 1 MYKQVIVVRG 10


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YKEVIAVQG 10
+KE+I VQG
Sbjct: 390 FKEIIEVQG 398


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YKEVIAVQG 10
YK VIA++G
Sbjct: 184 YKNVIAIEG 192


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 EVIAVQG 10
EVIAVQG
Sbjct: 295 EVIAVQG 301


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YKEVIAVQG 10
+KE+I +QG
Sbjct: 390 FKEIIKIQG 398


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YKEVIAVQG 10
++E++A QG
Sbjct: 389 FREIVAAQG 397


>sp|AMPP2_ARCFU|AMP phosphorylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YKEVIAVQG 10
++E++A QG
Sbjct: 388 FREIVAAQG 396


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YKEVIAVQG 10
Y+ VIA++G
Sbjct: 191 YRNVIAIEG 199


>sp|DNAG_PYRIL|DNA primase DnaG|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YKEVIAVQG 10
Y+ VIA++G
Sbjct: 191 YRNVIAIEG 199


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YKEVIAVQG 10
Y+ VIA++G
Sbjct: 191 YRNVIAIEG 199


>sp|RLME_METVS|RIBOSOMAL RNA large subunit methyltransferase|Methanococcus vannielii

Query: 2 YKEVIAVQG 10
Y+ VIAV+G
Sbjct: 87 YENVIAVKG 95


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 2 YKEVIAVQ 9
YKE IAV+
Sbjct: 249 YKETIAVR 256


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 2 YKEVIAVQ 9
YKE IAV+
Sbjct: 249 YKETIAVR 256


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 2 YKEVIAVQ 9
YKE IAV+
Sbjct: 254 YKETIAVR 261


>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 2 YKEVIAVQG 10
YK +AV+G
Sbjct: 187 YKNTVAVEG 195


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 IYKEVIAVQG 10
+Y+ ++AV+G
Sbjct: 320 VYRALVAVEG 329




178|Sequence|886|895|IAVQGPPDGT

>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVQGPPDG 9
I V+GPP G
Sbjct: 114 IVVEGPPMG 122


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 1 IAVQGPPDG 9
IAVQ PDG
Sbjct: 119 IAVQSVPDG 127


>sp|KCY_STAMF|CYTIDYLATE kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IAVQGPPDG 9
I + GPP G
Sbjct: 4 IVISGPPGG 12


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AVQGPPDGT 10
V G PDGT
Sbjct: 379 GVHGHPDGT 387


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IAVQGPPDG 9
I V PPDG
Sbjct: 82 IPVINPPDG 90


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 1 IAVQGPPDG 9
+ V+GPP G
Sbjct: 107 LVVEGPPMG 115


>sp|IF2P_HALLT|PROBABLE translation initiation factor IF-2|Halorubrum lacusprofundi (strain

Query: 1 IAVQGPPDGT 10
I VQGP +GT
Sbjct: 231 IDVQGPGEGT 240


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 4 QGPPDG 9
+GPP+G
Sbjct: 156 EGPPEG 161


>sp|SURE_METKA|5'-NUCLEOTIDASE SurE|Methanopyrus kandleri (strain AV19 /

Query: 3 VQGPPDGT 10
+Q PP+GT
Sbjct: 215 IQDPPEGT 222


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IAVQGPPDGT 10
+ V PP+GT
Sbjct: 154 VIVTSPPNGT 163


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAVQGP 6
IAVQGP
Sbjct: 151 IAVQGP 156




179|Sequence|891|900|PPDGTVLVSI

>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 PDGTVLV 8
PDGTV+V
Sbjct: 426 PDGTVIV 432


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PPDGTVLVS 9
P DGT+LV+
Sbjct: 129 PEDGTLLVA 137


>sp|GCSH_PYRAB|PROBABLE glycine cleavage system H|Pyrococcus abyssi (strain GE5 /

Query: 3 DGTVLVSI 10
DGTVLV I
Sbjct: 27 DGTVLVGI 34


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain

Query: 2 PDGTVL 7
PDGTVL
Sbjct: 33 PDGTVL 38


>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PPDGTVLV 8
PP+G +LV
Sbjct: 208 PPEGLILV 215


>sp|GCSH_THEKO|PROBABLE glycine cleavage system H|Thermococcus kodakarensis (strain ATCC

Query: 3 DGTVLVSI 10
DGTVLV I
Sbjct: 27 DGTVLVGI 34


>sp|GCSH_PYRFU|PROBABLE glycine cleavage system H|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DGTVLVSI 10
DGTVLV I
Sbjct: 27 DGTVLVGI 34


>sp|GCSH_PYRHO|PROBABLE glycine cleavage system H|Pyrococcus horikoshii (strain ATCC

Query: 3 DGTVLVSI 10
DGTVLV I
Sbjct: 27 DGTVLVGI 34


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 3 DGTVLVSI 10
DGTVLV I
Sbjct: 27 DGTVLVGI 34


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 427 PDGTVVI 433


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 55 PDGTVII 61


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 2 PDGTVLVSI 10
PDG L+S+
Sbjct: 309 PDGEALISV 317


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 55 PDGTVII 61


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 55 PDGTVII 61


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 55 PDGTVII 61


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 55 PDGTVII 61


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PDGTVLV 8
PDGTV++
Sbjct: 55 PDGTVII 61


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPDGTV 6
PP+GT+
Sbjct: 568 PPEGTI 573


>sp|PYRI_THESM|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus sibiricus

Query: 1 PPDGTVLVSI 10
P D T+LV+I
Sbjct: 33 PEDNTILVAI 42


>sp|AATE_THEGJ|A-TYPE ATP synthase subunit E|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PDGTVLV 8
PDGTV V
Sbjct: 166 PDGTVRV 172


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 1 PPDGTVL 7
P DGT+L
Sbjct: 112 PKDGTIL 118


>sp|PFDA_METB6|PREFOLDIN subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 3 DGTVLVSI 10
DGTVL+ I
Sbjct: 52 DGTVLLQI 59


>sp|FNO_METJA|F420-DEPENDENT NADP reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPDGTV 6
PPDG+V
Sbjct: 117 PPDGSV 122


>sp|RIFK_HYPBU|RIBOFLAVIN kinase|Hyperthermus butylicus (strain DSM 5456

Query: 2 PDGTVLVSI 10
PD TV+V+I
Sbjct: 128 PDKTVIVTI 136


>sp|KDAD_SACS2|2-DEHYDRO-3-DEOXY-D-ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PDGTVLVS 9
PDGT+L +
Sbjct: 252 PDGTILTT 259


>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PDGTVLVSI 10
PDG VLV +
Sbjct: 30 PDGEVLVRL 38


>sp|PURO_HALSA|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PDGTVLVSI 10
PDGT V I
Sbjct: 113 PDGTAYVGI 121


>sp|PURO_HALS3|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PDGTVLVSI 10
PDGT V I
Sbjct: 113 PDGTAYVGI 121


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 PPDGTVLV 8
PP+ TVLV
Sbjct: 593 PPEMTVLV 600


>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM

Query: 1 PPDGTVLV 8
PP G VL+
Sbjct: 28 PPSGRVLI 35




180|Sequence|896|905|VLVSIKSSLP

***** No hits found ******


181|Sequence|901|910|KSSLPENNFF

>sp|CDPAS_ARCFU|CDP-ARCHAEOL synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SSLPENNFF 10
SSLP N FF
Sbjct: 80 SSLPFNEFF 88


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SSLPENN 8
SSLPEN+
Sbjct: 192 SSLPEND 198




182|Sequence|906|915|ENNFFDDALI

>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 ENNFFDDALI 10
+NN+FDDA+I
Sbjct: 506 DNNYFDDAII 515


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 ENNFFDDAL 9
++NF+DD L
Sbjct: 231 KHNFYDDTL 239


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 1 ENNFFDDALI 10
E N FDD +I
Sbjct: 179 EKNGFDDVII 188


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 3 NFFDDALI 10
NF DD L+
Sbjct: 827 NFIDDLLV 834


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ENNFFDDALI 10
++N+F DAL+
Sbjct: 353 KSNYFIDALL 362


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 ENNFFDDALI 10
E+NF+DD I
Sbjct: 21 EHNFWDDIRI 30


>sp|HEM1_THEAC|GLUTAMYL-TRNA reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 NNFFDDALI 10
NNFF+ A++
Sbjct: 15 NNFFNQAVL 23


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 NFFDDALI 10
NF DD +I
Sbjct: 113 NFLDDTII 120


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 1 ENNFFDD 7
+NN FDD
Sbjct: 77 KNNLFDD 83




183|Sequence|911|920|DDALIDELLQ

>sp|HYD1D_PYRFU|SULFHYDROGENASE 1 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ALIDELLQ 10
A++DELLQ
Sbjct: 22 AMMDELLQ 29


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDALIDEL 8
+DALIDEL
Sbjct: 545 EDALIDEL 552


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 DDALIDEL 8
DDAL DE+
Sbjct: 183 DDALADEI 190


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 1 DDALIDELL 9
DDA+ DE+L
Sbjct: 162 DDAIKDEIL 170


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19

Query: 2 DALIDELLQ 10
DAL D+LL+
Sbjct: 81 DALADKLLE 89


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DALIDELLQ 10
+ALIDE L+
Sbjct: 322 EALIDEFLE 330


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 DDALIDE 7
DDA++DE
Sbjct: 419 DDAIVDE 425


>sp|RL10_METTL|LARGE ribosomal subunit protein uL10|Methanothermococcus

Query: 1 DDALIDEL 8
DDAL DEL
Sbjct: 290 DDALDDEL 297




184|Sequence|916|925|DELLQQFASF

>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 DELLQQFA 8
D+LLQ+FA
Sbjct: 160 DDLLQKFA 167


>sp|RTCA_THEON|RNA 3'-terminal phosphate cyclase|Thermococcus onnurineus (strain NA1)

Query: 1 DELLQQFAS 9
DELL+Q S
Sbjct: 269 DELLEQLTS 277


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ELLQQFAS 9
ELL++FAS
Sbjct: 347 ELLREFAS 354


>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DELLQQFASF 10
+ELLQQ SF
Sbjct: 59 EELLQQTYSF 68




185|Sequence|921|930|QFASFGEVIL

>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain ATCC

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 227 KYAPFGEVVV 236


>sp|GATD_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 228 KYAPFGEVVV 237


>sp|GATD_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.16.4

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 228 KYAPFGEVVV 237


>sp|GATD_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain M.14.25

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 228 KYAPFGEVVV 237


>sp|GATD_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 228 KYAPFGEVVV 237


>sp|GATD_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 228 KYAPFGEVVV 237


>sp|GATD_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus islandicus (strain

Query: 1 QFASFGEVIL 10
++A FGEV++
Sbjct: 228 KYAPFGEVVV 237


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QFASFGEV 8
+FA+FGE+
Sbjct: 293 RFATFGEL 300




186|Sequence|926|935|GEVILIRFVE

>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 429 GEVVIIRY 436


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GEVILIRF 8
GEV++IR+
Sbjct: 430 GEVVVIRY 437


>sp|ALBA_METPE|DNA/RNA-BINDING protein Alba|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GEVILIRFVE 10
GE+ L RF+E
Sbjct: 48 GEIALNRFLE 57


>sp|3MGH_METMJ|PUTATIVE 3-methyladenine DNA glycosylase|Methanoculleus marisnigri (strain

Query: 1 GEVILIRFVE 10
GE +L+R +E
Sbjct: 91 GEAVLVRALE 100


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GEVILIRFV 9
G+V+++R+V
Sbjct: 426 GDVVVVRYV 434


>sp|HIS3_METST|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GEVILIRFVE 10
GE++++ F++
Sbjct: 26 GEILMVAFID 35


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 GEVILIRF 8
GEVI +RF
Sbjct: 478 GEVIRLRF 485




187|Sequence|931|940|IRFVEDKMWV

>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 3 FVEDKMW 9
FVED++W
Sbjct: 599 FVEDRLW 605


>sp|IXTPA_METMA|DITP/XTP pyrophosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RFVEDKM 8
RFVEDK+
Sbjct: 83 RFVEDKL 89


>sp|IXTPA_METAC|DITP/XTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RFVEDKM 8
RFVEDK+
Sbjct: 83 RFVEDKL 89


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 RFVEDKMWV 10
RF DK W+
Sbjct: 692 RFTFDKAWI 700


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 IRFVEDKMW 9
+++ ED++W
Sbjct: 84 VKYTEDEIW 92


>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IRFVEDK 7
IRF+EDK
Sbjct: 106 IRFIEDK 112


>sp|Y413_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 1 IRFVEDKMWV 10
+R++EDK +V
Sbjct: 252 LRYIEDKYFV 261


>sp|RPIA_THEKO|RIBOSE-5-PHOSPHATE isomerase A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IRFVEDKMWV 10
++F+ED+M V
Sbjct: 15 LKFIEDEMVV 24




188|Sequence|936|945|DKMWVTFLEG

>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DKMWVTFLEG 10
D++W FLEG
Sbjct: 500 DEIWERFLEG 509


>sp|RL18_AERPE|LARGE ribosomal subunit protein uL18|Aeropyrum pernix (strain ATCC

Query: 3 MWVTFLEG 10
+WV FLE
Sbjct: 44 LWVQFLEA 51


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KMWVTFLE 9
K+W+ FL+
Sbjct: 134 KVWIVFLD 141


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KMWVTFLE 9
K+W+ FL+
Sbjct: 134 KVWIVFLD 141


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KMWVTFLE 9
K+W TF E
Sbjct: 440 KLWTTFQE 447


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DKMWVTFLEG 10
D+ W+ +EG
Sbjct: 77 DRRWINGIEG 86


>sp|RS3A_METKA|SMALL ribosomal subunit protein eS1|Methanopyrus kandleri (strain AV19

Query: 1 DKMWVTFL 8
DK+W T L
Sbjct: 8 DKVWYTIL 15




189|Sequence|941|950|TFLEGSSALN

>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TFLEGSSAL 9
+++EG+SAL
Sbjct: 214 SYIEGNSAL 222


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 TFLEGSSAL 9
T LEG+SAL
Sbjct: 45 TALEGASAL 53


>sp|IF6_METLZ|TRANSLATION initiation factor 6|Methanocorpusculum labreanum (strain ATCC

Query: 1 TFLEGSSAL 9
TF++GSS +
Sbjct: 49 TFVQGSSVI 57




190|Sequence|946|955|SSALNVLSLN

***** No hits found ******


191|Sequence|951|960|VLSLNGKELL

>sp|GFCR_METM7|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C7 /

Query: 2 LSLNGKELL 10
L+LNG+ELL
Sbjct: 36 LTLNGEELL 44


>sp|GFCR_METM6|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C6 /

Query: 2 LSLNGKELL 10
L+LNG+ELL
Sbjct: 36 LTLNGEELL 44


>sp|GFCR_METM5|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C5 /

Query: 2 LSLNGKELL 10
L+LNG+ELL
Sbjct: 36 LTLNGEELL 44


>sp|GFCR_METMP|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain DSM 14266

Query: 2 LSLNGKELL 10
L+LNG+ELL
Sbjct: 36 LTLNGEELL 44


>sp|HEM3_METAC|PROBABLE porphobilinogen deaminase|Methanosarcina acetivorans (strain ATCC

Query: 1 VLSLNGKE 8
VLSL+GKE
Sbjct: 257 VLSLDGKE 264


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VLSLNGKEL 9
++ +NGKEL
Sbjct: 197 IMDVNGKEL 205


>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 1 VLSLNGKELL 10
+++ NGKELL
Sbjct: 123 IITNNGKELL 132


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLSLNGKELL 10
VLSL+G+E +
Sbjct: 257 VLSLDGREAI 266


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VLSLNGKELL 10
VLSL GK L+
Sbjct: 24 VLSLRGKPLI 33


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 4 LNGKELL 10
LNG+ELL
Sbjct: 606 LNGQELL 612


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLSLNGKEL 9
++ +NGKE+
Sbjct: 535 IIKVNGKEM 543


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLSLNGKEL 9
++ +NGKE+
Sbjct: 535 IIKVNGKEM 543


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLSLNGKEL 9
++ +NGKE+
Sbjct: 535 IIKVNGKEM 543


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLSLNGKELL 10
+L+L+G ELL
Sbjct: 483 ILTLSGGELL 492


>sp|RRP4_SACS2|EXOSOME complex component Rrp4|Saccharolobus solfataricus (strain ATCC

Query: 1 VLSLNGKEL 9
VLS+ GK+L
Sbjct: 140 VLSVKGKDL 148


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LNGKEL 9
LNGKEL
Sbjct: 631 LNGKEL 636




192|Sequence|956|965|GKELLNRTIT

>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKELLNRTI 9
G+EL+NR I
Sbjct: 225 GRELINRII 233


>sp|Y3532_METJA|UNCHARACTERIZED protein MJECL32|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKELLNRTI 9
GKEL NRT+
Sbjct: 2 GKELDNRTL 10


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GKELLNRTIT 10
G+ELLN+T +
Sbjct: 55 GEELLNQTYS 64


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 GKELLNRTI 9
G+E+L RTI
Sbjct: 29 GREILYRTI 37


>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKELLNRTI 9
G+E+L RTI
Sbjct: 34 GREILYRTI 42


>sp|CMR4_SACS2|CRISPR system CMR subunit Cmr4|Saccharolobus solfataricus (strain ATCC

Query: 1 GKELLNRTI 9
G+E++NR++
Sbjct: 222 GREVINRSL 230


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 KELLNRTI 9
KEL NRT+
Sbjct: 17 KELNNRTV 24


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain

Query: 1 GKELLN 6
GKELLN
Sbjct: 22 GKELLN 27


>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GKELLN 6
GKELLN
Sbjct: 371 GKELLN 376


>sp|ARFB_METM6|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C6 /

Query: 1 GKELLNRTIT 10
GK LLN IT
Sbjct: 202 GKSLLNDLIT 211


>sp|ARFB_METM5|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C5 /

Query: 1 GKELLNRTIT 10
GK LLN IT
Sbjct: 202 GKSLLNDLIT 211




193|Sequence|961|970|NRTITIALKS

>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NRTITIALKS 10
NRT+TI++++
Sbjct: 348 NRTLTISMRN 357


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 NRTITIALKS 10
+RT+T A+KS
Sbjct: 366 DRTLTTAMKS 375


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 NRTITIALKS 10
+RT+T A+KS
Sbjct: 365 DRTLTTAMKS 374


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 1 NRTITIALKS 10
+RT+T A+KS
Sbjct: 365 DRTLTTAMKS 374




194|Sequence|966|975|IALKSPDWIK

>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 4 KSPDWIK 10
K PDWIK
Sbjct: 347 KVPDWIK 353


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 IALKSPDWI 9
+ +K PDWI
Sbjct: 680 LGIKQPDWI 688


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 KSPDWIK 10
+ PDW+K
Sbjct: 6 RKPDWLK 12


>sp|HIS6_METBF|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina barkeri (strain

Query: 2 ALKSPDWIK 10
A+K+PD+IK
Sbjct: 110 AVKNPDFIK 118


>sp|HIS6_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 2 ALKSPDWIK 10
A+K+PD+IK
Sbjct: 110 AVKNPDFIK 118


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IALKSPDWI 9
+AL P+WI
Sbjct: 188 VALMEPEWI 196


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 2 ALKSPDWIK 10
A PDWI+
Sbjct: 93 ATAEPDWIE 101


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM

Query: 3 LKSPDWIK 10
LK P+W+K
Sbjct: 18 LKKPEWVK 25


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 IALKSPDWI 9
+ + PDWI
Sbjct: 679 LGISQPDWI 687


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 IALKSPDWI 9
+ +K P+WI
Sbjct: 680 LGIKQPEWI 688


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain

Query: 4 KSPDWIK 10
K PDWIK
Sbjct: 48 KIPDWIK 54


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 4 KSPDWIK 10
K+P+WI+
Sbjct: 318 KTPEWIE 324


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KSPDWIK 10
K+P W+K
Sbjct: 353 KAPKWVK 359


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 129 APDWIE 134


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 3 LKSPDWI 9
+KSP+W+
Sbjct: 26 VKSPEWV 32


>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PDWIK 10
PDWI+
Sbjct: 314 PDWIR 318


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 6 PDWIK 10
PDW+K
Sbjct: 9 PDWLK 13


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 2 ALKSPDWI 9
AL PDWI
Sbjct: 246 ALFLPDWI 253


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALKSPDWIK 10
A+K DWI+
Sbjct: 143 AIKVRDWIR 151


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 129 APDWIE 134


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 130 APDWIE 135


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 130 APDWIE 135


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 6 PDWIK 10
PDW+K
Sbjct: 442 PDWVK 446


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 4 KSPDW 8
K+PDW
Sbjct: 584 KNPDW 588


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 127 APDWIE 132


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 IALKSPDWIK 10
+ LK+P W +
Sbjct: 338 VKLKNPGWAR 347


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KSPDW 8
K+PDW
Sbjct: 132 KAPDW 136


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 128 APDWIE 133


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 135 APDWIE 140


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 3 LKSPDWIK 10
LK P W+K
Sbjct: 445 LKMPWWVK 452


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 128 APDWIE 133


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 KSPDWIK 10
K PDW K
Sbjct: 203 KRPDWDK 209


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 IALKSPDWIK 10
I K PDW K
Sbjct: 196 IISKRPDWDK 205


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 5 SPDWIK 10
SPDW K
Sbjct: 448 SPDWNK 453


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 KSPDWIK 10
K PDW K
Sbjct: 199 KRPDWDK 205


>sp|RS8_HYPBU|SMALL ribosomal subunit protein uS8|Hyperthermus butylicus (strain DSM

Query: 3 LKSPDWIK 10
++ PDW++
Sbjct: 87 IRMPDWLR 94


>sp|GUAAB_METM7|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 131 APDWIE 136


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 131 APDWIE 136


>sp|GUAAB_METMP|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcus

Query: 5 SPDWIK 10
+PDWI+
Sbjct: 131 APDWIE 136


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 KSPDWIK 10
K PDW K
Sbjct: 202 KRPDWDK 208




195|Sequence|971|980|PDWIKNLEEE

>sp|PRIS_METPE|DNA primase small subunit PriS|Methanosphaerula palustris (strain ATCC

Query: 1 PDWIKNLEE 9
PDW K L+E
Sbjct: 268 PDWKKRLQE 276


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DWIKNLEE 9
DWIKNL E
Sbjct: 126 DWIKNLGE 133


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 1 PDWIKN 6
PDW++N
Sbjct: 232 PDWVRN 237


>sp|TRPB_METKA|TRYPTOPHAN synthase beta chain|Methanopyrus kandleri (strain AV19 /

Query: 2 DWIKNLE 8
DWI NLE
Sbjct: 178 DWITNLE 184


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 PDWIKN 6
PDW++N
Sbjct: 234 PDWVRN 239


>sp|LYSJ_PYRFU|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 PDWIKNLEEE 10
P+W+ L+E+
Sbjct: 43 PEWVSELQEQ 52


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 1 PDWIKN 6
PDW++N
Sbjct: 234 PDWVRN 239


>sp|TRM1_META3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus aeolicus

Query: 3 WIKNLEEE 10
++KN+EEE
Sbjct: 244 YVKNIEEE 251


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 DWIKNLEE 9
DWIK +EE
Sbjct: 447 DWIKEMEE 454


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DWIKNLE 8
DW+ N+E
Sbjct: 182 DWVTNIE 188


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 DWIKNLEE 9
DWIK +EE
Sbjct: 108 DWIKAVEE 115


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 WIKNLEEE 10
WI++LEE+
Sbjct: 435 WIQDLEEK 442


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PDWIKNLEEE 10
PD+IK +EE+
Sbjct: 289 PDFIKLVEEQ 298


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 IKNLEEE 10
IKNLE+E
Sbjct: 89 IKNLEQE 95


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 2 DWIKNLEE 9
DW K +EE
Sbjct: 155 DWAKRVEE 162


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WIKNLEE 9
W+K+LEE
Sbjct: 178 WVKSLEE 184


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DWIKNLE 8
+WIKNLE
Sbjct: 422 EWIKNLE 428


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DWIKN 6
DWIKN
Sbjct: 115 DWIKN 119


>sp|FLA1_SACSH|FLAGELLIN FlaB2|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PDWIKN 6
P W+KN
Sbjct: 203 PQWLKN 208


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 PDWIKNLEE 9
PD+I+ LE+
Sbjct: 456 PDYIERLED 464


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 PDWIKNL 7
PDW +NL
Sbjct: 332 PDWKRNL 338


>sp|IF2A_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 PDWIKNLEE 9
P W+KN+ +
Sbjct: 48 PTWVKNIRD 56


>sp|IF2A_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 PDWIKNL 7
P W+KN+
Sbjct: 48 PTWVKNI 54


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 DWIKNLEEE 10
DW L+EE
Sbjct: 627 DWASELDEE 635


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 DWIKNLEEE 10
DW L+EE
Sbjct: 627 DWASELDEE 635


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 PDWIKNLEE 9
PD IK LEE
Sbjct: 276 PDGIKILEE 284


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 PDWIKNLEE 9
PD +K LE+
Sbjct: 308 PDHVKKLEQ 316


>sp|COFC_NATPD|2-PHOSPHO-L-LACTATE guanylyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DWIKN 6
DW+KN
Sbjct: 179 DWLKN 183


>sp|THIM_METM6|HYDROXYETHYLTHIAZOLE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 DWIKNLEEE 10
DW+ ++EE
Sbjct: 245 DWLYRIDEE 253


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DWIKN 6
DW+KN
Sbjct: 20 DWLKN 24


>sp|NADM_SULTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WIKNLE 8
WI+NLE
Sbjct: 84 WIRNLE 89


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 DWIKNLEE 9
DW+++LE+
Sbjct: 329 DWLRSLED 336


>sp|ACYP_THEVO|ACYLPHOSPHATASE volcanium (strain ATCC 51530

Query: 3 WIKNLEE 9
WIKNL +
Sbjct: 34 WIKNLPD 40


>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 1 PDWIKNLEE 9
PD+ KN+ E
Sbjct: 41 PDFAKNVHE 49


>sp|ACYP_HALWD|ACYLPHOSPHATASE walsbyi (strain DSM 16790

Query: 3 WIKNLEE 9
W++NL++
Sbjct: 37 WVRNLDD 43




196|Sequence|976|985|NLEEEMSLEK

>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 2 LEEEMSLEK 10
LE+EMS+E+
Sbjct: 51 LEQEMSMER 59


>sp|RL18_KORCO|LARGE ribosomal subunit protein uL18|Korarchaeum cryptofilum (strain

Query: 2 LEEEMSLEK 10
LEEE SLE+
Sbjct: 155 LEEEGSLER 163


>sp|IF2G_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 LEEEMSLEK 10
L+EEM +EK
Sbjct: 353 LDEEMEVEK 361


>sp|Y1514_ARCFU|UNCHARACTERIZED protein AF_1514|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NLEEEMSLE 9
NL++E+SLE
Sbjct: 10 NLQKEVSLE 18




197|Sequence|981|990|MSLEKISIAL

>sp|FWDC_METMI|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 1 MSLEKIS 7
MSLEKIS
Sbjct: 29 MSLEKIS 35




198|Sequence|986|995|ISIALPSSTS

>sp|Y1533_ARCFU|UNCHARACTERIZED transporter AF_1533|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISIALPSSTS 10
+SIALP+S++
Sbjct: 90 VSIALPASST 99




199|Sequence|991|1000|PSSTSSTLLG

>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 SSTSSTLLG 10
S TSS LLG
Sbjct: 341 SGTSSPLLG 349




200|Sequence|996|1005|STLLGEDAEV

>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 STLLGEDAEV 10
+ L+GEDAEV
Sbjct: 138 AALVGEDAEV 147


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LLGEDAEV 10
LLGEDA++
Sbjct: 246 LLGEDADI 253


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 2 TLLGEDAE 9
T+LG+DAE
Sbjct: 19 TILGDDAE 26


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 STLLGEDAEV 10
+TLL ED+EV
Sbjct: 475 TTLLVEDSEV 484


>sp|GCH1_SACI7|GTP cyclohydrolase 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 LGEDAEV 10
LGED EV
Sbjct: 65 LGEDGEV 71


>sp|GCH1_SACI6|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.4 /

Query: 4 LGEDAEV 10
LGED EV
Sbjct: 65 LGEDGEV 71


>sp|GCH1_SACI4|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.14.25 /

Query: 4 LGEDAEV 10
LGED EV
Sbjct: 65 LGEDGEV 71


>sp|GCH1_SACI3|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.27)

Query: 4 LGEDAEV 10
LGED EV
Sbjct: 65 LGEDGEV 71


>sp|GCH1_SACI2|GTP cyclohydrolase 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 LGEDAEV 10
LGED EV
Sbjct: 65 LGEDGEV 71


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 STLLGEDAE 9
S L+GED E
Sbjct: 606 SILMGEDVE 614


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 STLLGEDAE 9
+T+LGED +
Sbjct: 52 ATILGEDKQ 60


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 STLLGEDAE 9
ST+ G DAE
Sbjct: 197 STITGNDAE 205




201|Sequence|1001|1010|EDAEVAADFD

>sp|BACH_HALSS|HALORHODOPSIN sp. (strain SG1)

Query: 1 EDAEVAADFD 10
EDAE+A D
Sbjct: 190 EDAEIAGTAD 199


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 2 DAEVAADF 9
D EVAA+F
Sbjct: 214 DEEVAAEF 221


>sp|VORD_PYRHO|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus horikoshii (strain ATCC

Query: 1 EDAEVAADFD 10
ED VA D+D
Sbjct: 72 EDGFVAIDYD 81




202|Sequence|1006|1015|AADFDMEGDV

>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AADFDMEGDV 10
A D+D+EG V
Sbjct: 110 ACDYDIEGSV 119


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AADFDMEGDV 10
A D+D EG+V
Sbjct: 105 ACDYDTEGEV 114


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AADFDMEGDV 10
A D+D EG+V
Sbjct: 105 ACDYDTEGEV 114


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 AADFDMEGDV 10
A D+D EG+V
Sbjct: 105 ACDYDTEGEV 114


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 AADFDMEGDV 10
A D+D+EG V
Sbjct: 101 ACDYDIEGSV 110


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ADFDMEGDV 10
A DMEGDV
Sbjct: 176 ARVDMEGDV 184


>sp|RL5_METST|LARGE ribosomal subunit protein uL5|Methanosphaera stadtmanae (strain

Query: 1 AADFDMEGDV 10
A+ FD EG+V
Sbjct: 88 ASQFDKEGNV 97


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AADFDMEGDV 10
A D+D+EG++
Sbjct: 109 ATDWDIEGEL 118


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 1 AADFDMEG 8
+A+F+MEG
Sbjct: 190 SAEFEMEG 197


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 3 DFDMEGDV 10
DF++ GDV
Sbjct: 507 DFELRGDV 514


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AADFDMEGDV 10
A D+D EG++
Sbjct: 104 ATDYDREGEL 113


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AADFDMEG 8
A D+D+EG
Sbjct: 111 ACDYDIEG 118


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AADFDMEGDV 10
A D+D EG++
Sbjct: 107 ATDYDREGEL 116


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AADFDMEGDV 10
A+DF +GD+
Sbjct: 76 ASDFRRKGDI 85


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 3 DFDMEGDV 10
D+D++G+V
Sbjct: 70 DYDIDGEV 77


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AADFDMEGD 9
A DF ++GD
Sbjct: 766 ACDFKLDGD 774


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AADFDMEGD 9
AAD D++GD
Sbjct: 538 AADMDIDGD 546




203|Sequence|1011|1020|MEGDVDDYSA

>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 1 MEGDVDDYSA 10
M+G +DDYSA
Sbjct: 102 MDGIMDDYSA 111


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 MEGDVDDY 8
+EGD DDY
Sbjct: 90 LEGDSDDY 97


>sp|Y182_ARCFU|UNCHARACTERIZED protein AF_0182|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DVDDYS 9
DVDDYS
Sbjct: 45 DVDDYS 50


>sp|PAN_PYRHO|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EGDVDDY 8
+GD DDY
Sbjct: 12 QGDYDDY 18


>sp|RS19_THEVO|SMALL ribosomal subunit protein uS19|Thermoplasma volcanium (strain

Query: 1 MEGDVDD 7
+EGD DD
Sbjct: 75 LEGDYDD 81


>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 MEGDVDDYSA 10
++GD DD+S
Sbjct: 232 IQGDCDDFSG 241


>sp|RLME_CENSY|RIBOSOMAL RNA large subunit methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 MEGDVDDYS 9
M GDV+D S
Sbjct: 85 MRGDVEDES 93




204|Sequence|1016|1025|DDYSAEVEEL

>sp|ACDE_METSH|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanothrix

Query: 1 DDYSAEVEEL 10
DDY A V+E+
Sbjct: 172 DDYHAAVDEV 181


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 DDYSAEVEEL 10
DDY A +EEL
Sbjct: 260 DDYRAALEEL 269


>sp|RRP4_METS3|EXOSOME complex component Rrp4|Methanobrevibacter smithii (strain ATCC

Query: 1 DDYSAEVEEL 10
DDYS + EEL
Sbjct: 229 DDYSDDYEEL 238


>sp|HTR7_HALSA|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 700922

Query: 1 DDYSAEVEEL 10
D YSA VEE+
Sbjct: 273 DSYSATVEEV 282


>sp|HTR7_HALS3|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 29341

Query: 1 DDYSAEVEEL 10
D YSA VEE+
Sbjct: 273 DSYSATVEEV 282


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 DDYSAEVEEL 10
DD A++EEL
Sbjct: 120 DDIEAKIEEL 129


>sp|HTR1_HALMA|SENSORY rhodopsin I transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 DDYSAEVEEL 10
DD SA +EE+
Sbjct: 424 DDISASIEEM 433


>sp|AATE_PICTO|A-TYPE ATP synthase subunit E|Picrophilus torridus (strain ATCC 700027

Query: 1 DDYSAEVEEL 10
D+YS +EEL
Sbjct: 23 DEYSKRIEEL 32


>sp|RL7A_HALWD|LARGE ribosomal subunit protein eL8|Haloquadratum walsbyi (strain DSM

Query: 1 DDYSAEVEEL 10
DD +A++EEL
Sbjct: 110 DDITAKIEEL 119


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 DDYSAEVEE 9
DDY E+EE
Sbjct: 451 DDYVTEIEE 459


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DDYSAEVEE 9
DD+S +VEE
Sbjct: 472 DDWSGDVEE 480


>sp|Y919_METJA|UNCHARACTERIZED protein MJ0919|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDYSAEVEEL 10
DDY E+EE+
Sbjct: 25 DDYLEEIEEI 34


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DDYSAEVEEL 10
D Y AEVE L
Sbjct: 331 DRYQAEVEGL 340


>sp|RFCS_PYRCJ|REPLICATION factor C small subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DDYSAEVEEL 10
DD AEV EL
Sbjct: 278 DDVKAEVAEL 287


>sp|Y1374_SULTO|DNA-BINDING protein STK_13740|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DDYSAEVEEL 10
D+Y AE++EL
Sbjct: 3 DEYDAELDEL 12


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 1 DDYSAEVEEL 10
DD AE+EE+
Sbjct: 193 DDLIAEIEEI 202


>sp|Y2113_ARCFU|UNCHARACTERIZED protein AF_2113|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYSAEVEE 9
DYS +VEE
Sbjct: 16 DYSGDVEE 23


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 1 DDYSAEVEE 9
D YSAE++E
Sbjct: 265 DKYSAEIDE 273




205|Sequence|1021|1030|EVEELLPQHL

>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EELLPQHL 10
EE LP+HL
Sbjct: 35 EEFLPEHL 42


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 EVEELLPQHL 10
EVE+ P+HL
Sbjct: 531 EVEDPTPEHL 540


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 2 VEELLPQHL 10
VEE L QHL
Sbjct: 196 VEEKLRQHL 204


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 1 EVEELLPQH 9
E+EE L QH
Sbjct: 313 ELEEALMQH 321




206|Sequence|1026|1035|LPQHLQPSSS

>sp|RNP2_NATPD|RIBONUCLEASE P protein component 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LPQHLQP 7
LP+HL+P
Sbjct: 4 LPKHLRP 10


>sp|RNP2_HALLT|RIBONUCLEASE P protein component 2|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LPQHLQP 7
LP+HL+P
Sbjct: 4 LPKHLRP 10


>sp|RNP2_HALMA|RIBONUCLEASE P protein component 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 LPQHLQP 7
LP+HL+P
Sbjct: 4 LPKHLRP 10


>sp|RL21_METJA|LARGE ribosomal subunit protein eL21|Methanocaldococcus jannaschii

Query: 2 PQHLQPSSS 10
PQHL+P+++
Sbjct: 90 PQHLRPATA 98


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 QHLQPSSS 10
Q+LQPS S
Sbjct: 236 QYLQPSRS 243


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPQHLQPSSS 10
L Q+LQPS S
Sbjct: 233 LGQYLQPSRS 242


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LPQHLQPSSS 10
L Q+LQPS S
Sbjct: 233 LGQYLQPSRS 242


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 QHLQPSSS 10
Q+LQPS S
Sbjct: 236 QYLQPSRS 243


>sp|RL21_ARCFU|LARGE ribosomal subunit protein eL21|Archaeoglobus fulgidus (strain

Query: 2 PQHLQPSS 9
P+HL+P S
Sbjct: 89 PEHLKPQS 96


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PQHLQPSS 9
P H++PS+
Sbjct: 155 PMHVEPST 162


>sp|RL21_METAC|LARGE ribosomal subunit protein eL21|Methanosarcina acetivorans (strain

Query: 1 LPQHLQP 7
LPQHL+P
Sbjct: 88 LPQHLKP 94


>sp|RL21_METBF|LARGE ribosomal subunit protein eL21|Methanosarcina barkeri (strain

Query: 1 LPQHLQP 7
LPQHL+P
Sbjct: 88 LPQHLKP 94


>sp|RL21_STAMF|LARGE ribosomal subunit protein eL21|Staphylothermus marinus (strain

Query: 2 PQHLQPSSS 10
P+HL+P+ +
Sbjct: 91 PEHLRPAKA 99


>sp|RL21_METMA|LARGE ribosomal subunit protein eL21|Methanosarcina mazei (strain ATCC

Query: 1 LPQHLQP 7
+PQHL+P
Sbjct: 88 VPQHLKP 94


>sp|RS2_SULTO|SMALL ribosomal subunit protein uS2|Sulfurisphaera tokodaii (strain DSM

Query: 1 LPQHLQP 7
LP H++P
Sbjct: 130 LPNHIEP 136


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PQHLQPSS 9
P+ LQP S
Sbjct: 387 PERLQPFS 394




207|Sequence|1031|1040|QPSSSSGLGT

>sp|Y413_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 PSSSSGLG 9
PSS++GLG
Sbjct: 212 PSSNAGLG 219


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QPSSSSGLG 9
+PS S G+G
Sbjct: 572 EPSKSEGMG 580


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QPSSSSGLG 9
+PS S G+G
Sbjct: 572 EPSKSEGMG 580


>sp|Y924_METJA|UNCHARACTERIZED ATP-binding protein MJ0924|Methanocaldococcus jannaschii (strain

Query: 2 PSSSSGLGT 10
PS+SSG+ T
Sbjct: 123 PSTSSGVET 131


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 2 PSSSSGLG 9
P S+SGLG
Sbjct: 41 PKSASGLG 48


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 PSSSSGLGT 10
PSSSSG T
Sbjct: 11 PSSSSGKTT 19




208|Sequence|1036|1045|SGLGTSPSSS

>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SGLGTSPSSS 10
SG GTSPS++
Sbjct: 171 SGAGTSPSAT 180


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SGLGTSPSSS 10
+GLGT+P S
Sbjct: 128 AGLGTAPLRS 137


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 3 LGTSPSS 9
LGTSP S
Sbjct: 657 LGTSPDS 663


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GLGTSPSSS 10
GLGTS SSS
Sbjct: 6295 GLGTSTSSS 6303




209|Sequence|1041|1050|SPSSSPRTSP

***** No hits found ******


210|Sequence|1046|1055|PRTSPCQSPT

>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RTSPCQSPT 10
R PC+SPT
Sbjct: 86 RALPCRSPT 94




211|Sequence|1051|1060|CQSPTISEGP

>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QSPTISEGP 10
Q+PT SE P
Sbjct: 29 QTPTASEAP 37


>sp|CDVB2_SULAC|CELL division protein B2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QSPTISE 8
Q PTISE
Sbjct: 15 QEPTISE 21


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SPTISEGP 10
SPT++ GP
Sbjct: 26 SPTLASGP 33


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CQSPTISEGP 10
C SP +GP
Sbjct: 429 CDSPVEHDGP 438


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CQSPTISEGP 10
C+SP +GP
Sbjct: 432 CESPLERDGP 441


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CQSPTISEGP 10
CQ+ TIS+ P
Sbjct: 89 CQNWTISQFP 98




212|Sequence|1056|1065|ISEGPVPSLP

>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ISEGPVPSL 9
+SE P+P+L
Sbjct: 259 VSEKPIPAL 267


>sp|SYT_METBU|THREONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EGPVPSLP 10
EG VP+LP
Sbjct: 507 EGKVPNLP 514


>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ISEGPVPS 8
+ EGP+P+
Sbjct: 272 VGEGPLPT 279


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 3 EGPVPSLP 10
+GP PS+P
Sbjct: 215 QGPAPSMP 222


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ISEGPVPS 8
+ EGP+P+
Sbjct: 272 VGEGPLPT 279


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 3 EGPVPSLP 10
E P+P LP
Sbjct: 321 EVPIPELP 328


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ISEGPVPS 8
+ EGP+P+
Sbjct: 269 VGEGPMPT 276


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ISEGPVPS 8
+ EGP+P+
Sbjct: 272 VGEGPLPT 279


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ISEGPVPS 8
+ EGP+P+
Sbjct: 272 VGEGPLPT 279


>sp|SYN_PYRHO|ASPARAGINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISEGPVPSLP 10
+SE P+P P
Sbjct: 101 VSEFPIPENP 110


>sp|SYT_METKA|THREONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 EGPVPSLP 10
EG +P+LP
Sbjct: 492 EGKLPTLP 499


>sp|SYN_PYRAB|ASPARAGINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ISEGPVPSLP 10
+SE P+P P
Sbjct: 101 VSEFPIPENP 110


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 ISEGPVPSL 9
ISEGP+ ++
Sbjct: 994 ISEGPIDTM 1002


>sp|SYN_PYRFU|ASPARAGINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ISEGPVPSLP 10
+SE P+P P
Sbjct: 101 VSEFPIPENP 110




213|Sequence|1061|1070|VPSLPIRPSR

>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 3 SLPIRPSR 10
SLP+RP R
Sbjct: 383 SLPLRPKR 390


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VPSLPIRPS 9
+P LP RP+
Sbjct: 529 MPGLPARPA 537


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 PSLPIRP 8
P +PIRP
Sbjct: 230 PGIPIRP 236


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 PSLPIRP 8
P +PIRP
Sbjct: 230 PGIPIRP 236


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 2 PSLPIRP 8
PSLP RP
Sbjct: 5 PSLPERP 11


>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PSLPIRPS 9
P+LP +PS
Sbjct: 53 PNLPTKPS 60


>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPSLPIRPS 9
V +LP+RP+
Sbjct: 95 VQALPLRPT 103


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VPSLPIRPS 9
V +LP+RP+
Sbjct: 95 VQALPLRPT 103


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 PSLPIRPS 9
PSLP RP+
Sbjct: 5 PSLPDRPT 12


>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 3 SLPIRPSR 10
+LP+RP R
Sbjct: 383 NLPLRPKR 390


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 3 SLPIRPSR 10
+LP+RP R
Sbjct: 383 NLPLRPQR 390


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 3 SLPIRPSR 10
+LP+RP R
Sbjct: 385 NLPLRPKR 392


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 2 PSLPIRPS 9
P+LP +PS
Sbjct: 53 PNLPTKPS 60


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PSLPIRPSR 10
P+LPI+P
Sbjct: 220 PALPIKPEE 228




214|Sequence|1066|1075|IRPSRAPSRT

>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PSRAPSRT 10
P RAP+R+
Sbjct: 10 PERAPNRS 17


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PSRAPSRT 10
P RAP+R+
Sbjct: 10 PERAPNRS 17


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 3 PSRAPSRT 10
PSRAPS +
Sbjct: 163 PSRAPSHS 170




215|Sequence|1071|1080|APSRTPGPPS

>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 1 APSRTPGPP 9
+PS PGPP
Sbjct: 91 SPSFEPGPP 99


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 2 PSRTPGPP 9
PS PGPP
Sbjct: 91 PSFEPGPP 98


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PSRTPGP 8
P RTP P
Sbjct: 300 PDRTPNP 306


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 APSRTPGPP 9
+P PGPP
Sbjct: 92 SPEFEPGPP 100


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 90 SPTFEPGPP 98


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 APSRTPGPP 9
AP RTP P
Sbjct: 71 APMRTPAQP 79


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|RRP42_PYRHO|EXOSOME complex component Rrp42|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 2 PSRTPGPP 9
PS P PP
Sbjct: 399 PSSVPNPP 406


>sp|RRP42_PYRAB|EXOSOME complex component Rrp42|Pyrococcus abyssi (strain GE5 /

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 91 SPTFEPGPP 99


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 APSRTPGPP 9
+P PGPP
Sbjct: 92 SPEFEPGPP 100


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 PSRTPGPP 9
PSRT PP
Sbjct: 177 PSRTVHPP 184


>sp|RIFK_PYRFU|RIBOFLAVIN kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PSRTPGPP 9
PSRT PP
Sbjct: 177 PSRTIHPP 184


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 1 APSRTPGPP 9
+P+ PGPP
Sbjct: 92 SPTFEPGPP 100


>sp|MDH_AERPE|MALATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 3 SRTPGPP 9
+RTPG P
Sbjct: 30 ARTPGKP 36


>sp|RIFK_PYRHO|RIBOFLAVIN kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PSRTPGPP 9
PSRT PP
Sbjct: 177 PSRTVHPP 184


>sp|NADK_HALLT|NAD kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PSRTPGPPS 10
P R GPPS
Sbjct: 257 PMRIAGPPS 265


>sp|RL11_METTH|LARGE ribosomal subunit protein uL11|Methanothermobacter

Query: 5 TPGPP 9
TPGPP
Sbjct: 16 TPGPP 20




216|Sequence|1076|1085|PGPPSAQSSP

>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GPPSAQSSP 10
GPP+A P
Sbjct: 50 GPPTANGRP 58


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPPSAQSSP 10
GPP+A P
Sbjct: 49 GPPTANGRP 57


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPPSAQSSP 10
GPP+A P
Sbjct: 49 GPPTANGRP 57


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGPPSAQ 7
P PP AQ
Sbjct: 257 PSPPEAQ 263


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 3 PPSAQSSP 10
PPS +S P
Sbjct: 157 PPSTESDP 164




217|Sequence|1081|1090|AQSSPIDAQP

>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 4 SPIDAQP 10
+PIDAQP
Sbjct: 259 NPIDAQP 265


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 4 SPIDAQP 10
+PIDAQP
Sbjct: 259 NPIDAQP 265


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 4 SPIDAQP 10
+PIDAQP
Sbjct: 260 NPIDAQP 266


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SPIDAQP 10
+P+DAQP
Sbjct: 260 NPVDAQP 266


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 SPIDAQP 10
+P+DAQP
Sbjct: 259 NPVDAQP 265


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 4 SPIDAQ 9
SPIDAQ
Sbjct: 258 SPIDAQ 263


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 4 SPIDAQ 9
SPIDAQ
Sbjct: 258 SPIDAQ 263




218|Sequence|1086|1095|IDAQPATPLP

>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 4 QPATPLP 10
+PA+PLP
Sbjct: 318 RPASPLP 324


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 5 PATPLP 10
P TPLP
Sbjct: 255 PVTPLP 260




219|Sequence|1091|1100|ATPLPQKDPA

>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPLPQKDPA 10
TP+P+ DPA
Sbjct: 181 TPMPEDDPA 189


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 TPLPQKDP 9
TP P+KDP
Sbjct: 199 TPDPKKDP 206


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLPQKDP 9
P P+KDP
Sbjct: 178 PEPEKDP 184


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PLPQKD 8
PLPQK+
Sbjct: 252 PLPQKE 257


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPLPQK 7
TP+PQK
Sbjct: 169 TPVPQK 174


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 3 PLPQKDPA 10
P+P +DPA
Sbjct: 23 PMPLEDPA 30


>sp|Y3525_METJA|UNCHARACTERIZED protein MJECL25|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPLPQKDP 9
T LP+K+P
Sbjct: 24 TSLPKKEP 31


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TPLPQKD 8
TP+P+K+
Sbjct: 146 TPMPEKE 152


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLPQKDP 9
P+PQ DP
Sbjct: 479 PVPQVDP 485




220|Sequence|1096|1105|QKDPAQPLEP

>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 1 QKDPAQPLEP 10
+K PA+P+EP
Sbjct: 201 KKAPAEPIEP 210


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QKDPAQPL 8
Q DPAQPL
Sbjct: 313 QFDPAQPL 320


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KDPAQPLEP 10
K+PA+P +P
Sbjct: 461 KNPARPYQP 469


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KDPAQPLE 9
K PA PLE
Sbjct: 106 KPPANPLE 113


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 KDPAQPL 8
KDPA P+
Sbjct: 313 KDPADPV 319


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 3 DPAQPLEP 10
DP P+EP
Sbjct: 896 DPEDPIEP 903


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 2 KDPAQPL 8
KDPA P+
Sbjct: 318 KDPADPI 324


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QKDPAQPL 8
Q DP QPL
Sbjct: 313 QFDPGQPL 320


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 QKDPAQPL 8
Q DP QPL
Sbjct: 313 QFDPGQPL 320


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QKDPAQPL 8
Q DP QPL
Sbjct: 309 QFDPGQPL 316




221|Sequence|1101|1110|QPLEPKRPPP

>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 2 PLEPKRPP 9
PLEP +PP
Sbjct: 48 PLEPHKPP 55


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QPLEPKRPPP 10
Q +PK+ PP
Sbjct: 120 QQFQPKQAPP 129


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 2 PLEPKRPP 9
PLEP R P
Sbjct: 48 PLEPHRSP 55


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 3 LEPKRPPP 10
LEP RP P
Sbjct: 238 LEPLRPSP 245


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 1 QPLEPKRP 8
+PLEP+ P
Sbjct: 517 KPLEPENP 524


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PLEPKRPPP 10
P++P+ PP
Sbjct: 422 PVDPRLQPP 430


>sp|UVRB_HALSA|UVRABC system protein B|Halobacterium salinarum (strain ATCC 700922

Query: 2 PLEPKRP 8
PL+P RP
Sbjct: 7 PLQPDRP 13


>sp|PHNC1_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain ATCC

Query: 1 QPLEPKRPPP 10
+PL P+ P P
Sbjct: 121 EPLLPQHPEP 130


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LEPKRP 8
L+PKRP
Sbjct: 201 LDPKRP 206


>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 3 LEPKRP 8
L+PKRP
Sbjct: 201 LDPKRP 206




222|Sequence|1106|1115|KRPPPPRPVA

>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 4 PPPRP 8
PPP+P
Sbjct: 315 PPPKP 319


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 1 KRPPPPRPVA 10
+RP P RP A
Sbjct: 438 QRPSPDRPYA 447


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 RPPPPRP 8
+P PP+P
Sbjct: 1242 KPEPPKP 1248


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPPPRPVA 10
PP P+P++
Sbjct: 586 PPEPKPLS 593


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 PPPPRPVA 10
P PP P+A
Sbjct: 41 PEPPEPLA 48




223|Sequence|1111|1120|PRPVAPPTRP

>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 PRPVAPPTRP 10
PRPV P + P
Sbjct: 783 PRPVVPSSYP 792


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 RPVAPPTRP 10
RP PP P
Sbjct: 308 RPALPPKEP 316


>sp|PYRF_METMP|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain DSM

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 148 VAPSTRP 154


>sp|PYRF_METM6|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 148 VAPSTRP 154


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PRPVAPPTRP 10
PR + P RP
Sbjct: 218 PRSMVPEVRP 227


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 145 VAPATRP 151


>sp|PYRF_METBU|OROTIDINE 5'-phosphate decarboxylase|Methanococcoides burtonii (strain DSM

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 145 VAPATRP 151


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 145 VAPATRP 151


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 PRPVAPPTRP 10
P P+APP P
Sbjct: 22 PEPLAPPLDP 31


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain ATCC

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 145 VAPATRP 151


>sp|PYRF_METTE|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina thermophila

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 139 VAPATRP 145


>sp|PYRF_METJA|OROTIDINE 5'-phosphate decarboxylase|Methanocaldococcus jannaschii (strain

Query: 4 VAPPTRP 10
VAP TRP
Sbjct: 143 VAPSTRP 149


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PRPVAPPT 8
P P PPT
Sbjct: 100 PNPNGPPT 107


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PRPVAPPTRP 10
P P+APP P
Sbjct: 22 PEPLAPPLDP 31


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PVAPPTRP 10
P+AP RP
Sbjct: 45 PIAPGVRP 52


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 PRPVAPPTR 9
PRPV P T+
Sbjct: 40 PRPVVPATK 48


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRPVAPPTRP 10
P P+APP P
Sbjct: 22 PEPLAPPLDP 31


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRPVAPPTRP 10
P P++PP P
Sbjct: 33 PEPLSPPLDP 42


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PRPVAPPTRP 10
P P+ PP P
Sbjct: 35 PSPIDPPLDP 44




224|Sequence|1116|1125|PPTRPAPPQR

>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PTRPAPP 8
PTRP+PP
Sbjct: 505 PTRPSPP 511


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PTRPAPP 8
PT+P+PP
Sbjct: 505 PTKPSPP 511


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PTRPAPP 8
P RP+PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PTRPAPP 8
P RP+PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 PTRPAP 7
PTRPAP
Sbjct: 504 PTRPAP 509


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PTRPAPP 8
P RP+PP
Sbjct: 510 PGRPSPP 516


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 PPTRPAP 7
PP RP P
Sbjct: 36 PPGRPIP 42


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PTRPAPP 8
P RP+PP
Sbjct: 510 PGRPSPP 516


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPTRPAPP 8
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PTRPAPP 8
P RP+PP
Sbjct: 509 PYRPSPP 515


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PTRPAPP 8
PT P+PP
Sbjct: 505 PTSPSPP 511


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPTRPAPP 8
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPTRPAPP 8
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPTRPAPP 8
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PTRPAPP 8
PTR +PP
Sbjct: 520 PTRASPP 526


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PTRPAPP 8
PTR +PP
Sbjct: 520 PTRASPP 526


>sp|RL13_AERPE|LARGE ribosomal subunit protein uL13|Aeropyrum pernix (strain ATCC

Query: 2 PTRPAPPQR 10
P RP PQR
Sbjct: 75 PKRPRTPQR 83


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 PPTRPAPPQR 10
P RP PP +
Sbjct: 48 PGARPMPPNK 57


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 2 PTRPAPP 8
PTR +PP
Sbjct: 524 PTRASPP 530


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PTRPAPP 8
PTR +PP
Sbjct: 524 PTRASPP 530


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PTRPAPP 8
P RP+PP
Sbjct: 514 PGRPSPP 520


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 TRPAPPQR 10
TRP PP R
Sbjct: 341 TRPNPPAR 348


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PPTRPAPP 8
P + PAPP
Sbjct: 318 PISEPAPP 325


>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain

Query: 1 PPTRPA 6
PP RPA
Sbjct: 54 PPVRPA 59


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 2 PTRPAPPQR 10
PT P PP +
Sbjct: 353 PTMPVPPMK 361


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PTRPAPPQR 10
T P+PPQR
Sbjct: 16 STEPSPPQR 24


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPTRPAP 7
PP RP P
Sbjct: 335 PPERPRP 341


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 TRPAPPQR 10
T P+PP R
Sbjct: 17 TEPSPPAR 24




225|Sequence|1121|1130|APPQRPPPPS

>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPQRPPPP 9
PPQ+P P
Sbjct: 159 PPQKPLNP 166


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 505 PTRPSPP 511


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 APPQRPPPP 9
PP+ P PP
Sbjct: 274 GPPREPLPP 282


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 APPQRPPPPS 10
+PP+RP P S
Sbjct: 334 SPPERPRPTS 343


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 APPQRPPPP 9
PP+ P PP
Sbjct: 274 GPPREPLPP 282


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 APPQRPPPP 9
PP+ P PP
Sbjct: 274 GPPREPLPP 282


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 APPQRPPPPS 10
A P+R PPS
Sbjct: 179 ADPRREGPPS 188


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 APPQRPPPP 9
PP+ P PP
Sbjct: 274 GPPREPLPP 282


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 509 PYRPSPP 515


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPQRPP 7
PP++PP
Sbjct: 324 PPEQPP 329


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain

Query: 3 PQRPPP 8
PQR PP
Sbjct: 2 PQRQPP 7


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 APPQRPPP 8
APP R PP
Sbjct: 175 APPHRLPP 182


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPQRPPPP 9
PP +PP P
Sbjct: 200 PPVKPPEP 207


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PPQRPPPP 9
PPQRP P
Sbjct: 72 PPQRPSIP 79


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PQRPPPP 9
P RP PP
Sbjct: 514 PGRPSPP 520


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PQRPPPPS 10
PQRP P+
Sbjct: 641 PQRPATPA 648




226|Sequence|1126|1135|PPPPSGARSP

>sp|AGLI_HALVD|GLYCOSYLTRANSFERASE AglI|Haloferax volcanii (strain ATCC 29605

Query: 1 PPPPSGARSP 10
PP PSG +SP
Sbjct: 244 PPRPSGVKSP 253


>sp|Y335_METJA|UNCHARACTERIZED protein MJ0335|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPPPSGA 7
P PPSG+
Sbjct: 229 PVPPSGS 235


>sp|Y791_METB6|UPF0316 protein Mboo_0791|Methanoregula boonei (strain DSM 21154

Query: 1 PPPPSGARSP 10
P PP+G +P
Sbjct: 5 PGPPAGFHAP 14


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 PPPSGARSP 10
PP S A+SP
Sbjct: 140 PPSSPAKSP 148


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 PPPPSGARSP 10
PP P R+P
Sbjct: 516 PPDPQEGRAP 525


>sp|RS8E_METST|SMALL ribosomal subunit protein eS8|Methanosphaera stadtmanae (strain

Query: 4 PSGARS 9
PSGARS
Sbjct: 12 PSGARS 17


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPPPSGA 7
P PP GA
Sbjct: 119 PKPPKGA 125


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PPSGAR 8
PPSG+R
Sbjct: 15 PPSGSR 20




227|Sequence|1131|1140|GARSPAPTRK

>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GARSPAPTR 9
GA SPAP R
Sbjct: 12 GAASPAPER 20


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 SPAPTRK 10
SPAPT++
Sbjct: 254 SPAPTKR 260


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 ARSPAPTRK 10
ARSPAP R
Sbjct: 56 ARSPAPERN 64


>sp|Y596_METJA|UNCHARACTERIZED protein MJ0596|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RSPAPTRK 10
+SPA TRK
Sbjct: 85 KSPATTRK 92


>sp|RS24_PYRAR|SMALL ribosomal subunit protein eS24|Pyrobaculum arsenaticum (strain

Query: 3 RSPAPTRK 10
++P PTRK
Sbjct: 30 KAPTPTRK 37


>sp|GGGPS_CALMQ|GERANYLGERANYLGLYCERYL phosphate synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GARSPAPT 8
GAR P P+
Sbjct: 179 GAREPVPS 186


>sp|GGGPS_METTP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GARSPAPT 8
GA SP PT
Sbjct: 185 GAESPVPT 192


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 3 RSPAPTRK 10
++PAPTR+
Sbjct: 98 KTPAPTRR 105


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RSPAPTRK 10
+SP PTR+
Sbjct: 88 KSPTPTRR 95


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 GARSPAP 7
GAR+P+P
Sbjct: 211 GARTPSP 217




228|Sequence|1136|1145|APTRKEFGGI

>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 APTRKEFGG 9
APT+ E GG
Sbjct: 571 APTKDEMGG 579


>sp|MPTA_HALSA|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 700922

Query: 1 APTRKEFGG 9
APTR+E G
Sbjct: 142 APTREEIGA 150


>sp|MPTA_HALS3|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 29341

Query: 1 APTRKEFGG 9
APTR+E G
Sbjct: 142 APTREEIGA 150


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PTRKEFG 8
P+R+EFG
Sbjct: 432 PSREEFG 438


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TRKEFGG 9
TRKE GG
Sbjct: 554 TRKELGG 560


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PTRKEFGGI 10
P RKE+G +
Sbjct: 37 PPRKEYGDL 45


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 APTRKEFGGI 10
A RKEFG +
Sbjct: 93 AHERKEFGDV 102


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 PTRKEFGGI 10
PTR E G +
Sbjct: 49 PTRSELGDV 57


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 APTRKEFGG 9
+PT++EF G
Sbjct: 225 SPTKEEFYG 233


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 4 RKEFGG 9
RK+FGG
Sbjct: 591 RKDFGG 596


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 KEFGGI 10
KEFGG+
Sbjct: 397 KEFGGV 402


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 TRKEFGGI 10
++K+FGG+
Sbjct: 396 SQKQFGGV 403


>sp|AROD_THEKO|3-DEHYDROQUINATE dehydratase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PTRKEFGGI 10
P R+E GGI
Sbjct: 53 PRRREEGGI 61


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 PTRKEFGGI 10
PTR E G I
Sbjct: 51 PTRSELGEI 59


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 PTRKEFGGI 10
PTR E G I
Sbjct: 51 PTRSELGEI 59




229|Sequence|1141|1150|EFGGIGAPPS

>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 EFGGIGAPPS 10
EFG I PPS
Sbjct: 256 EFGHIAHPPS 265


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 2 FGGIGAP 8
FGGIG P
Sbjct: 54 FGGIGEP 60


>sp|PYRK_PYRHO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus horikoshii

Query: 3 GGIGAPP 9
GGIG PP
Sbjct: 97 GGIGIPP 103


>sp|RF1_METTH|PEPTIDE chain release factor subunit|Methanothermobacter thermautotrophicus

Query: 2 FGGIGA 7
FGGIGA
Sbjct: 396 FGGIGA 401


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 3 GGIGAPP 9
GGIG PP
Sbjct: 97 GGIGIPP 103


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 2 FGGIGAPPS 10
FG IG P S
Sbjct: 202 FGAIGKPRS 210


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EFGGIGAPP 9
E GIG PP
Sbjct: 74 EDNGIGIPP 82


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 EFGGIGAPP 9
E GIG PP
Sbjct: 75 EDNGIGIPP 83


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FGGIGAPP 9
+G IG+PP
Sbjct: 42 YGFIGSPP 49


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 2 FGGIGA 7
FGG+GA
Sbjct: 403 FGGLGA 408


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 FGGIGA 7
FGG+GA
Sbjct: 403 FGGLGA 408


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 FGGIGA 7
FGG+GA
Sbjct: 406 FGGLGA 411


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FGGIGA 7
FGG+GA
Sbjct: 406 FGGLGA 411


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 FGGIGA 7
FGG+GA
Sbjct: 403 FGGLGA 408


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi (strain

Query: 3 GGIGAPP 9
GGIG PP
Sbjct: 97 GGIGIPP 103


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 3 GGIGAPP 9
GGIG PP
Sbjct: 97 GGIGIPP 103


>sp|RS9_METTP|SMALL ribosomal subunit protein uS9|Methanothrix thermoacetophila (strain

Query: 1 EFGGIGA 7
+FGG+GA
Sbjct: 117 KFGGLGA 123


>sp|LYSY_PYRCJ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 EFGGIGAPP 9
+FG I APP
Sbjct: 165 KFGLISAPP 173


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GIGAPP 9
G+G+PP
Sbjct: 249 GVGSPP 254


>sp|RS13_CENSY|SMALL ribosomal subunit protein uS13|Cenarchaeum symbiosum (strain A)

Query: 3 GGIGAPPS 10
GG GAPP
Sbjct: 201 GGAGAPPQ 208


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EFGGIGA 7
EFG +GA
Sbjct: 135 EFGSVGA 141




230|Sequence|1146|1155|GAPPSPGVAR

>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GAPPSPGVA 9
GAPPS GV+
Sbjct: 296 GAPPSEGVS 304


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAPPSPGVA 9
GAPPS GV+
Sbjct: 297 GAPPSEGVS 305


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GAPPSPGVA 9
GAPPS GV+
Sbjct: 297 GAPPSEGVS 305


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GAPPSPGVA 9
GAPPS GV+
Sbjct: 297 GAPPSEGVS 305


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 GAPPSPGVA 9
GAPPS GV+
Sbjct: 297 GAPPSEGVS 305


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 164 GAPNSPGI 171


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 164 GAPNSPGI 171


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 164 GAPNSPGI 171


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 167 GAPNSPGI 174


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 164 GAPNSPGI 171


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GAPPSPGVA 9
GAPP GV+
Sbjct: 297 GAPPEEGVS 305


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GAPPSPGVA 9
GAPP GV+
Sbjct: 292 GAPPEEGVS 300


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 164 GAPNSPGI 171


>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 1 GAPPSPGVAR 10
G PPSP + R
Sbjct: 128 GCPPSPELIR 137


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GAPPSPGVA 9
GAPP GV+
Sbjct: 296 GAPPREGVS 304


>sp|Y1993_ARCFU|UNCHARACTERIZED protein AF_1993|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APPSPG 7
APP+PG
Sbjct: 106 APPNPG 111


>sp|MPTD_METKA|DIHYDRONEOPTERIN aldolase|Methanopyrus kandleri (strain AV19 /

Query: 1 GAPPSPGVA 9
G P SPG A
Sbjct: 30 GTPVSPGTA 38


>sp|RL29_PICTO|LARGE ribosomal subunit protein uL29|Picrophilus torridus (strain ATCC

Query: 1 GAPPSPGVAR 10
GAP SPG R
Sbjct: 38 GAPSSPGKMR 47


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GAPPSPGVA 9
G P SPGVA
Sbjct: 378 GVPASPGVA 386


>sp|RL29_METJA|LARGE ribosomal subunit protein uL29|Methanocaldococcus jannaschii

Query: 1 GAPPSPGVAR 10
GAP +PG R
Sbjct: 39 GAPSNPGRMR 48


>sp|SECF_HALVD|PROTEIN-EXPORT membrane protein SecF|Haloferax volcanii (strain ATCC 29605

Query: 1 GAPPSPGV 8
GAP +PGV
Sbjct: 42 GAPVNPGV 49


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GAPPSPGV 8
G+P SPG+
Sbjct: 157 GSPSSPGI 164


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPSPGV 8
PP+PGV
Sbjct: 8 PPNPGV 13


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPSPGV 8
PP PG+
Sbjct: 104 PPKPGI 109


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 1 GAPPSPGV 8
GAP SPG+
Sbjct: 164 GAPDSPGI 171


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 1 GAPPSPGV 8
G PPSP +
Sbjct: 131 GCPPSPEI 138


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 3 PPSPGV 8
PP+PG+
Sbjct: 76 PPTPGI 81


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPSPGV 8
PP PGV
Sbjct: 8 PPKPGV 13


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPSPGVAR 10
PP P VAR
Sbjct: 66 PPRPVVAR 73


>sp|QOX2_SULAC|QUINOL oxidase subunit 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PPSPG 7
PPSPG
Sbjct: 63 PPSPG 67


>sp|RL29_METAR|LARGE ribosomal subunit protein uL29|Methanocella arvoryzae (strain DSM

Query: 1 GAPPSPGVAR 10
GAP +PG R
Sbjct: 39 GAPENPGRIR 48


>sp|RL29_METAC|LARGE ribosomal subunit protein uL29|Methanosarcina acetivorans (strain

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPENPG 45


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GAPPSPGVAR 10
G P PG++R
Sbjct: 79 GKPRKPGMSR 88


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PPSPGVAR 10
P SPGVAR
Sbjct: 82 PWSPGVAR 89


>sp|RL29_META3|LARGE ribosomal subunit protein uL29|Methanococcus aeolicus (strain

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPSNPG 45


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GAPPSP 6
G PPSP
Sbjct: 36 GRPPSP 41


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAPPSP 6
G PPSP
Sbjct: 150 GLPPSP 155


>sp|RL29_METMA|LARGE ribosomal subunit protein uL29|Methanosarcina mazei (strain ATCC

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPDNPG 45


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GAPPSPGV 8
G+P SPGV
Sbjct: 157 GSPSSPGV 164


>sp|RL29_METBF|LARGE ribosomal subunit protein uL29|Methanosarcina barkeri (strain

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPENPG 45


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GAPPSPGV 8
G P SPG+
Sbjct: 158 GLPDSPGI 165


>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GAPPSPGVAR 10
G P PG++R
Sbjct: 79 GKPRKPGMSR 88


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 GAPPSP 6
G PPSP
Sbjct: 127 GCPPSP 132


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 GAPPSPGVA 9
G P SPG+
Sbjct: 386 GLPASPGIG 394


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PSPGVAR 10
P+PGVA+
Sbjct: 29 PTPGVAK 35


>sp|RL29_METMP|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPSNPG 45


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GAPPSPGVAR 10
G P PG++R
Sbjct: 79 GKPRKPGMSR 88


>sp|RL29_METM7|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPSNPG 45


>sp|RL29_METM5|LARGE ribosomal subunit protein uL29|Methanococcus maripaludis (strain

Query: 1 GAPPSPG 7
GAP +PG
Sbjct: 39 GAPSNPG 45




231|Sequence|1151|1160|PGVARREMEA

>sp|Y1269_PYRHO|UPF0098 protein PH1269|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGVARREME 9
PG +R+E+E
Sbjct: 170 PGASRKELE 178


>sp|Y1232_METJA|UNCHARACTERIZED protein MJ1232|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGVARREMEA 10
PG R +M+A
Sbjct: 38 PGTIRNQMQA 47


>sp|EF1B_METLZ|ELONGATION factor 1-beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PGVARREMEA 10
PG+ R E+E+
Sbjct: 72 PGIDRTEIES 81


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 1 PGVARRE 7
PG+ RRE
Sbjct: 63 PGITRRE 69


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 GVARREME 9
GV+++EME
Sbjct: 34 GVSKKEME 41


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 1 PGVARRE 7
PG++RRE
Sbjct: 64 PGLSRRE 70


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PGVARREME 9
PGVA E+E
Sbjct: 110 PGVAEMEIE 118




232|Sequence|1156|1165|REMEAPKSPG

>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 1 REMEAPKSPG 10
R+ E PK+PG
Sbjct: 395 RKFERPKNPG 404


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 128 MVAPKSPG 135


>sp|ILVC_PYRFU|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 130 MVAPKSPG 137


>sp|ILVC_METBU|KETOL-ACID reductoisomerase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 127 MVAPKSPG 134


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 130 MVAPKSPG 137


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 127 MVAPKSPG 134


>sp|ILVC_IGNAA|KETOL-ACID reductoisomerase (NAD(P)(+))|Ignisphaera aggregans (strain DSM

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 127 MIAPKSPG 134


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 127 MIAPKSPG 134


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 3 MEAPKSPG 10
M APKSPG
Sbjct: 131 MVAPKSPG 138


>sp|ILVC_METM7|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C7 /

Query: 5 APKSPG 10
APKSPG
Sbjct: 128 APKSPG 133


>sp|ILVC_METM6|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C6 /

Query: 5 APKSPG 10
APKSPG
Sbjct: 128 APKSPG 133


>sp|ILVC_METM5|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain C5 /

Query: 5 APKSPG 10
APKSPG
Sbjct: 128 APKSPG 133


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 126 MIAPKAPG 133


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 4 EAPKSPG 10
EAPK+PG
Sbjct: 164 EAPKTPG 170


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 150 MVAPKAPG 157


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 127 MVAPKAPG 134


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MFAPKGPG 133


>sp|ILVC_METMP|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus maripaludis (strain DSM

Query: 3 MEAPKSPG 10
+ APKSPG
Sbjct: 126 LVAPKSPG 133


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 127 MVAPKAPG 134


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 3 MEAPKSPG 10
+ APKSPG
Sbjct: 126 LVAPKSPG 133


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MVAPKGPG 134


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 127 MVAPKAPG 134


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MAAPKGPG 134


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 131 MVAPKAPG 138


>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 3 MEAPKSPG 10
M APK+PG
Sbjct: 127 MIAPKAPG 134


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MVAPKGPG 134


>sp|ILVC_NITMS|KETOL-ACID reductoisomerase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MIAPKGPG 134


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MVAPKGPG 134


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MVAPKGPG 133


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MVAPKGPG 133


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MVAPKGPG 133


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MVAPKGPG 134


>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MVAPKGPG 133


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MVAPKGPG 133


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 126 MVAPKGPG 133


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MVAPKGPG 137


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 128 MVAPKGPG 135


>sp|ILVC_CENSY|KETOL-ACID reductoisomerase (NADP(+))|Cenarchaeum symbiosum (strain A)

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MVAPKGPG 134


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 2 EMEAPKSPG 10
E EAP +PG
Sbjct: 429 EHEAPAAPG 437


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MVAPKGPG 134


>sp|RL10_HALVD|LARGE ribosomal subunit protein uL10|Haloferax volcanii (strain ATCC

Query: 1 REMEAPKSPG 10
+E+EA K+P
Sbjct: 103 KELEASKTPA 112


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 127 MIAPKGPG 134


>sp|ILVC_SACS2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|ILVC_SACI7|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|ILVC_SACI6|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.16.4

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|ILVC_SACI4|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain M.14.25

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|ILVC_SACI3|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|ILVC_SACI2|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|ILVC_SACI1|KETOL-ACID reductoisomerase (NADP(+))|Saccharolobus islandicus (strain

Query: 3 MEAPKSPG 10
M APK PG
Sbjct: 130 MIAPKGPG 137


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 REMEAPKSPG 10
R +E+P++PG
Sbjct: 179 RFVESPETPG 188


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 3 MEAPKSPG 10
+E+PK PG
Sbjct: 294 IESPKMPG 301


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 3 MEAPKSPG 10
+ APK+PG
Sbjct: 126 LVAPKAPG 133




233|Sequence|1161|1170|PKSPGTTRKD

>sp|MDH_SULAC|MALATE dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKSPGTTRKD 10
P+ PG +R+D
Sbjct: 81 PRKPGMSRRD 90


>sp|MDH_SULTO|MALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PKSPGTTRKD 10
P+ PG +R+D
Sbjct: 81 PRKPGMSRRD 90


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PKSPGTTRKD 10
P+ PG +R+D
Sbjct: 81 PRKPGMSRRD 90


>sp|Y596_METJA|UNCHARACTERIZED protein MJ0596|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KSPGTTRK 9
KSP TTRK
Sbjct: 85 KSPATTRK 92


>sp|ILVC_UNCAG|KETOL-ACID reductoisomerase (NAD(+))|Uncultured archaeon GZfos26G2

Query: 1 PKSPGTTRK 9
PK+PGT +
Sbjct: 134 PKAPGTEER 142


>sp|MDH_PYRIL|MALATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PKSPGTTRK 9
P+ PG TR+
Sbjct: 79 PRKPGMTRE 87


>sp|F16PA_METB6|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanoregula boonei (strain DSM 21154

Query: 2 KSPGTTRKD 10
+SPG R+D
Sbjct: 181 QSPGALRRD 189


>sp|ENGB_PYRAB|PROBABLE GTP-binding protein EngB|Pyrococcus abyssi (strain GE5 /

Query: 2 KSPGTTRK 9
K PG TRK
Sbjct: 51 KRPGVTRK 58


>sp|PORD_METTM|PYRUVATE synthase subunit PorD|Methanothermobacter marburgensis (strain

Query: 2 KSPGTTRKD 10
K PG+TRK+
Sbjct: 9 KEPGSTRKN 17


>sp|MDH_PYRAE|MALATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PKSPGTTRK 9
P+ PG TR+
Sbjct: 79 PRKPGMTRE 87


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 PKSPGTTRKD 10
PK+PG +D
Sbjct: 129 PKAPGKAVRD 138


>sp|ENGB_PYRHO|PROBABLE GTP-binding protein EngB|Pyrococcus horikoshii (strain ATCC

Query: 2 KSPGTTRK 9
K PG TRK
Sbjct: 56 KRPGVTRK 63


>sp|RS24_PYRAR|SMALL ribosomal subunit protein eS24|Pyrobaculum arsenaticum (strain

Query: 2 KSPGTTRKD 10
K+P TRKD
Sbjct: 30 KAPTPTRKD 38


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KSPGTTRKD 10
+ PG TR+D
Sbjct: 81 RKPGMTRED 89


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PKSPGTTRK 9
P+ PG TR+
Sbjct: 79 PRKPGMTRE 87


>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KSPGTTRKD 10
+ PG TR+D
Sbjct: 81 RKPGMTRED 89


>sp|ENGB_METKA|PROBABLE GTP-binding protein EngB|Methanopyrus kandleri (strain AV19 /

Query: 2 KSPGTTRK 9
K PG TRK
Sbjct: 32 KRPGVTRK 39


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGTTRKD 10
PG TR+D
Sbjct: 62 PGVTRRD 68




234|Sequence|1166|1175|TTRKDNIGRS

>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RKDNIG 8
RKDNIG
Sbjct: 222 RKDNIG 227


>sp|G3P_SULTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 TRKDNIGR 9
T KDNIG+
Sbjct: 54 TVKDNIGK 61


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 2 TRKDNIGRS 10
TRKDN+ R
Sbjct: 242 TRKDNVRRE 250


>sp|MCRZ_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 3 RKDNIG 8
RKDNIG
Sbjct: 221 RKDNIG 226


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 DNIGRS 10
DN+GRS
Sbjct: 130 DNVGRS 135




235|Sequence|1171|1180|NIGRSQPSPQ

>sp|PYLS_METBA|PYRROLYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 NIGRSQPSP 9
N RS PSP
Sbjct: 129 NTSRSVPSP 137


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NIGRSQPS 8
NIG S+P+
Sbjct: 67 NIGNSEPA 74


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 2 IGRSQPSPQ 10
I RSQP P+
Sbjct: 530 IDRSQPIPE 538




236|Sequence|1176|1185|QPSPQAGLAG

>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QPSPQAGLAG 10
Q SP +G+AG
Sbjct: 492 QGSPNSGVAG 501


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 2 PSPQAGLAG 10
P P+ GLAG
Sbjct: 114 PVPEEGLAG 122


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 2 PSPQAGLA 9
P P+AG+A
Sbjct: 683 PQPKAGIA 690


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QPSPQAGLA 9
QP+P G+A
Sbjct: 307 QPTPAVGVA 315


>sp|METXA_HALVD|HOMOSERINE O-acetyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 QPSPQAGL 8
+PSP AGL
Sbjct: 215 RPSPDAGL 222


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 PSPQAGLAG 10
PSP G+AG
Sbjct: 526 PSPVVGVAG 534


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PSPQAG 7
P+PQAG
Sbjct: 286 PAPQAG 291


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 PSPQAGLAG 10
PSP G+AG
Sbjct: 526 PSPVVGVAG 534


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QPSPQAGLA 9
+PSP GLA
Sbjct: 226 RPSPDEGLA 234


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 QPSPQAGLA 9
QP+P G+A
Sbjct: 311 QPTPAVGVA 319


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 QPSPQAG 7
+PSPQ G
Sbjct: 26 EPSPQPG 32


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QPSPQAGLA 9
QP+P G+A
Sbjct: 305 QPTPAVGVA 313


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QPSPQAGLA 9
QP+P G+A
Sbjct: 305 QPTPAVGVA 313




237|Sequence|1181|1190|AGLAGPGPAG

>sp|PELO_SULTO|PROTEIN pelota homolog|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LAGPGP 8
LAGPGP
Sbjct: 192 LAGPGP 197


>sp|AROK_METVS|SHIKIMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 AGLAGPGPA 9
AGL+G GP+
Sbjct: 238 AGLSGTGPS 246


>sp|AROK_METM5|SHIKIMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 AGLAGPGPA 9
AGL+G GP+
Sbjct: 238 AGLSGTGPS 246


>sp|AROK_METJA|SHIKIMATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGLAGPGPA 9
AGL+G GP+
Sbjct: 238 AGLSGTGPS 246


>sp|AROK_METM7|SHIKIMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 AGLAGPGPA 9
AGL+G GP+
Sbjct: 238 AGLSGTGPS 246


>sp|AROK_METMP|SHIKIMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AGLAGPGPA 9
AGL+G GP+
Sbjct: 238 AGLSGTGPS 246


>sp|AROK_METM6|SHIKIMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 AGLAGPGPA 9
AGL+G GP+
Sbjct: 238 AGLSGTGPS 246


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 LAGPGP 8
+AGPGP
Sbjct: 191 IAGPGP 196


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 3 LAGPGP 8
+AGPGP
Sbjct: 190 IAGPGP 195


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 3 LAGPGP 8
+AGPGP
Sbjct: 226 VAGPGP 231


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 2 GLAGPG 7
G+AGPG
Sbjct: 88 GIAGPG 93


>sp|NIFB_METIM|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus infernus

Query: 2 GLAGPG 7
G+AGPG
Sbjct: 86 GIAGPG 91


>sp|AROK_THEGJ|SHIKIMATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AGLAGPGPA 9
AGL+G GPA
Sbjct: 238 AGLSGKGPA 246


>sp|Y431_NANEQ|UPF0215 protein NEQ431|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 AGLAGPGPAG 10
G + PGPAG
Sbjct: 189 GGDSNPGPAG 198


>sp|RISB_METMP|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GLAGPG 7
G+AGPG
Sbjct: 101 GIAGPG 106


>sp|CARA_METM5|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C5

Query: 4 AGPGP 8
AGPGP
Sbjct: 339 AGPGP 343


>sp|CARA_METMP|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain

Query: 4 AGPGP 8
AGPGP
Sbjct: 339 AGPGP 343


>sp|CARA_METM6|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C6

Query: 4 AGPGP 8
AGPGP
Sbjct: 339 AGPGP 343


>sp|CARA_METM7|CARBAMOYL phosphate synthase small chain|Methanococcus maripaludis (strain C7

Query: 4 AGPGP 8
AGPGP
Sbjct: 339 AGPGP 343


>sp|PGMI_THEVO|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma volcanium

Query: 1 AGLAGPGPAG 10
AG+ G G AG
Sbjct: 31 AGMGGSGIAG 40


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 AGLAGPGPAG 10
AG+ G G AG
Sbjct: 37 AGMGGSGIAG 46


>sp|RISB_METM5|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 GLAGPG 7
G+AGPG
Sbjct: 101 GIAGPG 106


>sp|RISB_METM7|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 GLAGPG 7
G+AGPG
Sbjct: 101 GIAGPG 106


>sp|RISB_METM6|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 GLAGPG 7
G+AGPG
Sbjct: 101 GIAGPG 106


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AGLAGPGPAG 10
AGLA GP G
Sbjct: 29 AGLADYGPEG 38


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 4 AGPGP 8
AGPGP
Sbjct: 340 AGPGP 344


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain ATCC

Query: 4 AGPGP 8
AGPGP
Sbjct: 336 AGPGP 340


>sp|AROK_THEKO|SHIKIMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AGLAGPGPA 9
GL+G GPA
Sbjct: 236 VGLSGKGPA 244




238|Sequence|1186|1195|PGPAGYSTAR

>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 PGPAGYS 7
PGP G+S
Sbjct: 477 PGPEGFS 483


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 4 AGYSTAR 10
+GYSTAR
Sbjct: 384 SGYSTAR 390


>sp|SPEB_METJA|AGMATINASE jannaschii (strain ATCC 43067

Query: 1 PGPAGYST 8
P P G+ST
Sbjct: 226 PEPCGFST 233


>sp|KDPA_METB6|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Methanoregula boonei (strain DSM

Query: 1 PGPAGYS 7
PGP G+S
Sbjct: 467 PGPHGFS 473


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GPAGYSTA 9
G AGYSTA
Sbjct: 5032 GVAGYSTA 5039


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 1 PGPAGYSTA 9
PG GY+T+
Sbjct: 79 PGAGGYATS 87


>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 1 PGPAGY 6
PGP GY
Sbjct: 16 PGPYGY 21


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GPAGYSTA 9
GPA Y TA
Sbjct: 245 GPASYKTA 252




239|Sequence|1191|1200|YSTARPTIPP

>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 ARPTIPP 10
A+P IPP
Sbjct: 300 AKPKIPP 306


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 RPTIPP 10
RP IPP
Sbjct: 208 RPVIPP 213


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YSTARPTI 8
YST PTI
Sbjct: 253 YSTFEPTI 260


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 2 STARPTIPP 10
S RP +PP
Sbjct: 49 SVIRPNLPP 57


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 STARPTIPP 10
S RP +PP
Sbjct: 49 SVIRPNLPP 57


>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 STARPTIPP 10
S RP +PP
Sbjct: 49 SVIRPNLPP 57


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 YSTARPTIPP 10
+ T RP +PP
Sbjct: 325 FLTRRPEMPP 334


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 RPTIPP 10
RP IPP
Sbjct: 208 RPVIPP 213


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 YSTARPTIPP 10
Y T RP I P
Sbjct: 211 YETNRPLITP 220




240|Sequence|1196|1205|PTIPPRAGVI

>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PTIPPRAGVI 10
P +P RAG+I
Sbjct: 486 PVMPERAGLI 495


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PTIPPRA 7
PT+PP A
Sbjct: 166 PTMPPEA 172


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 2 TIPPRAGVI 10
TIPP G++
Sbjct: 74 TIPPTPGIL 82


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 4 PPRAGV 9
PPRAG+
Sbjct: 343 PPRAGL 348


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 PPRAGV 9
PPRAG+
Sbjct: 341 PPRAGL 346


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 PPRAGV 9
PPRAG+
Sbjct: 376 PPRAGL 381


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTIPP 5
PTIPP
Sbjct: 98 PTIPP 102


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 PTIPPRAGV 9
P + PRAGV
Sbjct: 57 PLLQPRAGV 65


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PTIPPR 6
PTIPPR
Sbjct: 330 PTIPPR 335


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PTIPPR 6
PTIPPR
Sbjct: 330 PTIPPR 335


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PTIPPR 6
PTIPPR
Sbjct: 330 PTIPPR 335


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PTIPPR 6
PTIPPR
Sbjct: 330 PTIPPR 335


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IPPRAGV 9
IPPRAG+
Sbjct: 102 IPPRAGL 108


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 2 TIPPRAGVI 10
T+PP AG++
Sbjct: 188 TLPPLAGLV 196


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 TIPPRAGVI 10
T+ PR G+I
Sbjct: 233 TVRPRIGII 241


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 PTIPPRAG 8
PTIP R G
Sbjct: 201 PTIPLRTG 208




241|Sequence|1201|1210|RAGVISAPQS

>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC

Query: 1 RAGVISAPQS 10
R GVI+AP S
Sbjct: 10 RPGVINAPSS 19


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 2 AGVISAPQS 10
+GVI+APQS
Sbjct: 524 SGVITAPQS 532


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 3 GVISAPQ 9
GVISAPQ
Sbjct: 415 GVISAPQ 421


>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 AGVISAPQS 10
+G+I APQS
Sbjct: 11 SGIIKAPQS 19




242|Sequence|1206|1215|SAPQSHARAS

***** No hits found ******


243|Sequence|1211|1220|HARASAGRLT

>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HARASAGRL 9
H+R +AGR+
Sbjct: 311 HSRETAGRM 319


>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 1 HARASAGRL 9
H R+S GRL
Sbjct: 105 HGRSSLGRL 113


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HARASAGR 8
HAR AGR
Sbjct: 836 HARQQAGR 843


>sp|LYSZ_PYRCJ|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 ARASAGRL 9
ARA AGRL
Sbjct: 174 ARAGAGRL 181




244|Sequence|1216|1225|AGRLTPESQS

>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AGRLTPES 8
AGRLTPE+
Sbjct: 25 AGRLTPEA 32


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 AGRLTPESQ 9
AGRLTPE++
Sbjct: 94 AGRLTPEAR 102


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 1 AGRLTPESQ 9
GRLTPE++
Sbjct: 92 GGRLTPEAR 100


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AGRLTPES 8
GRLTPE+
Sbjct: 25 GGRLTPEA 32


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 2 GRLTPESQS 10
GRL+PE S
Sbjct: 32 GRLSPEEAS 40


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AGRLTPE 7
AGRL PE
Sbjct: 286 AGRLDPE 292




245|Sequence|1221|1230|PESQSKTSET

***** No hits found ******


246|Sequence|1226|1235|KTSETSKGST

***** No hits found ******


247|Sequence|1231|1240|SKGSTFLPEP

>sp|PYRE_THEGJ|OROTATE phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 SKGSTFLP 8
SKG TFLP
Sbjct: 162 SKGYTFLP 169


>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 TFLPEP 10
TFLPEP
Sbjct: 278 TFLPEP 283


>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 KGSTFLPE 9
KGS +LPE
Sbjct: 259 KGSFYLPE 266


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 4 STFLPEP 10
+TFLP+P
Sbjct: 230 ATFLPKP 236


>sp|RNZ_SACS2|RIBONUCLEASE Z|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 STFLPEP 10
STFL EP
Sbjct: 222 STFLDEP 228


>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 3 GSTFLP 8
GSTF+P
Sbjct: 154 GSTFMP 159




248|Sequence|1236|1245|FLPEPLKPQA

>sp|RNZ_SULAC|RIBONUCLEASE Z|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FLPEPL 6
FLPEPL
Sbjct: 279 FLPEPL 284


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 2 LPEPLKPQ 9
+P+PL PQ
Sbjct: 409 MPKPLTPQ 416


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 FLPEPLKPQ 9
FLP PL+ Q
Sbjct: 255 FLPNPLEAQ 263


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLPEPLKPQ 9
FLP+P++ Q
Sbjct: 255 FLPDPIEAQ 263


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 PEPLKPQ 9
PEP++P+
Sbjct: 190 PEPIRPE 196


>sp|Y2033_THEKO|UPF0215 protein TK2033|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FLPEPLK 7
F+PEPL+
Sbjct: 172 FIPEPLR 178


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 1 FLPEPLKP 8
FLPE +KP
Sbjct: 281 FLPEKIKP 288


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LPEPLK 7
LPEPLK
Sbjct: 5 LPEPLK 10


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPEPLKPQA 10
LPEP KP A
Sbjct: 530 LPEPEKPPA 538


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 3 PEPLKPQA 10
P PL P+A
Sbjct: 88 PHPLNPEA 95


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FLPEPLKPQA 10
+LP P P A
Sbjct: 70 YLPNPASPDA 79


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FLPEPLKPQ 9
FLP PL+ Q
Sbjct: 255 FLPSPLEAQ 263


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LPEPLKP 8
+PEPL+P
Sbjct: 429 IPEPLQP 435


>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PEPLKP 8
PEP++P
Sbjct: 176 PEPIRP 181


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 1 FLPEPLKP 8
++PE LKP
Sbjct: 20 YIPEVLKP 27


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 4 EPLKPQ 9
EPLKP+
Sbjct: 135 EPLKPE 140


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LPEPLKP 8
+PEPL+P
Sbjct: 429 VPEPLRP 435


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FLPEPLKPQ 9
F EPLKP+
Sbjct: 489 FEVEPLKPE 497


>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 FLPEPLKPQA 10
F+PE L+P A
Sbjct: 30 FVPEELRPMA 39


Query: 2 LPEPLKPQ 9
+PEPLK Q
Sbjct: 152 IPEPLKEQ 159


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FLPEPLKPQ 9
F EPLKP+
Sbjct: 489 FEVEPLKPE 497


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FLPEPLKPQ 9
FLP PL Q
Sbjct: 255 FLPNPLVAQ 263


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPEPLKPQ 9
+ +PLKPQ
Sbjct: 256 IDKPLKPQ 263


>sp|RPO11_METS5|DNA-DIRECTED RNA polymerase subunit Rpo11|Metallosphaera sedula (strain ATCC

Query: 1 FLPEPLKPQ 9
+LP PLK +
Sbjct: 44 YLPHPLKDE 52


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 PEPLKPQ 9
PE LKPQ
Sbjct: 558 PEQLKPQ 564


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PEPLKP 8
PEP++P
Sbjct: 173 PEPIRP 178


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PEPLKP 8
PEPL+P
Sbjct: 1012 PEPLRP 1017


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 3 PEPLKPQ 9
PEP KP+
Sbjct: 1243 PEPPKPE 1249


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 FLPEPLKPQ 9
++P P+KP+
Sbjct: 38 YVPFPVKPE 46


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 3 PEPLKPQA 10
P PLKP A
Sbjct: 221 PVPLKPNA 228


>sp|RL1_METAR|LARGE ribosomal subunit protein uL1|Methanocella arvoryzae (strain DSM

Query: 2 LPEPLKPQA 10
+P PL PQA
Sbjct: 130 MPAPLPPQA 138


>sp|COBQ_METB6|PROBABLE cobyric acid synthase|Methanoregula boonei (strain DSM 21154

Query: 1 FLPEPLKP 8
LP PL+P
Sbjct: 179 LLPAPLRP 186


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 2 LPEPLKPQ 9
+PEPL+ Q
Sbjct: 8 IPEPLRQQ 15


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 4 EPLKPQ 9
EPLKP+
Sbjct: 547 EPLKPE 552


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPEPLKP 8
LPEPL P
Sbjct: 32 LPEPLSP 38


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 FLPEPLK 7
F PEPLK
Sbjct: 127 FKPEPLK 133


>sp|RL21_METBF|LARGE ribosomal subunit protein eL21|Methanosarcina barkeri (strain

Query: 2 LPEPLKPQ 9
LP+ LKPQ
Sbjct: 88 LPQHLKPQ 95


>sp|RL21_METAC|LARGE ribosomal subunit protein eL21|Methanosarcina acetivorans (strain

Query: 2 LPEPLKPQ 9
LP+ LKPQ
Sbjct: 88 LPQHLKPQ 95


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 PEPLKPQ 9
PEP KP+
Sbjct: 725 PEPPKPE 731




249|Sequence|1241|1250|LKPQAAFPPQ

>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PQAAFPPQ 10
P AAFPP+
Sbjct: 415 PLAAFPPE 422


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 3 PQAAFPP 9
P+A FPP
Sbjct: 221 PRAGFPP 227


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 1 LKPQAAFPP 9
L+P AA+ P
Sbjct: 16 LRPSAAYTP 24


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKPQAAFP 8
++PQ AFP
Sbjct: 269 IEPQVAFP 276


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 3 PQAAFPP 9
P A FPP
Sbjct: 20 PDATFPP 26


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 2 KPQAAFPPQ 10
KP A PP+
Sbjct: 61 KPPAGIPPR 69


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM

Query: 2 KPQAAFPPQ 10
KP A PP+
Sbjct: 62 KPPAGIPPR 70


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 2 KPQAAFPPQ 10
KP A PP+
Sbjct: 62 KPPAGIPPR 70


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 2 KPQAAFPPQ 10
KP A PP+
Sbjct: 62 KPPAGIPPR 70


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 2 KPQAAFPPQ 10
KP A PP+
Sbjct: 62 KPPAGIPPR 70




250|Sequence|1246|1255|AFPPQSSLPP

>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FPPQSSLPP 10
FPPQ L P
Sbjct: 158 FPPQKPLNP 166


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPPQSSLPP 10
FPP+ +PP
Sbjct: 182 FPPEVIVPP 190


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PPQSSLPP 10
PP+ LPP
Sbjct: 275 PPREPLPP 282


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PPQSSLPP 10
PP+ LPP
Sbjct: 275 PPREPLPP 282


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PPQSSLPP 10
PP+ LPP
Sbjct: 275 PPREPLPP 282


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 PPQSSLPP 10
PP+ LPP
Sbjct: 275 PPREPLPP 282


>sp|SPCS_METKA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanopyrus kandleri (strain AV19 /

Query: 2 FPPQSSLP 9
FPP+SS P
Sbjct: 212 FPPRSSDP 219


>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 1 AFPPQSSLPP 10
AFP SSL P
Sbjct: 94 AFPVYSSLQP 103




251|Sequence|1251|1260|SSLPPPAQRL

>sp|Y1013_ARCFU|UNCHARACTERIZED protein AF_1013|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PPPAQRL 10
PPPAQ +
Sbjct: 126 PPPAQMM 132


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SSLPPP 6
+SLPPP
Sbjct: 87 ASLPPP 92


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 4 PPPAQR 9
PPP QR
Sbjct: 67 PPPTQR 72


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SLPPPAQR 9
SLP P+QR
Sbjct: 248 SLPDPSQR 255


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 2 SLPPPAQRL 10
S+P PA+RL
Sbjct: 291 SVPGPAKRL 299


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PPPAQR 9
PPP QR
Sbjct: 67 PPPTQR 72


>sp|LEUC_PYRNV|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum neutrophilum (strain DSM

Query: 4 PPPAQR 9
PPP QR
Sbjct: 67 PPPTQR 72


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 2 SLPPPAQRL 10
S+P PA+RL
Sbjct: 296 SIPGPAKRL 304


>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 SLPPPAQRL 10
SL PP QR+
Sbjct: 88 SLTPPFQRV 96


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 2 SLPPPAQRL 10
S+P PA+RL
Sbjct: 293 SVPGPAKRL 301




252|Sequence|1256|1265|PAQRLQEPLV

>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 1 PAQRLQEPLV 10
P +R+Q P++
Sbjct: 10 PTERIQNPII 19


>sp|IF2P_THEVO|PROBABLE translation initiation factor IF-2|Thermoplasma volcanium (strain

Query: 1 PAQRLQEPLV 10
PA++L++P+V
Sbjct: 10 PAKKLRQPIV 19


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 PAQRLQEPL 9
PA RLQE +
Sbjct: 34 PASRLQEAI 42


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PAQRLQEPLV 10
P Q L+EP++
Sbjct: 161 PRQILEEPVI 170


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 3 QRLQEPLV 10
QR+ EPL+
Sbjct: 365 QRISEPLI 372




253|Sequence|1261|1270|QEPLVPVAAP

>sp|FWDC_METWO|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 1 QEPLVPVAAP 10
++P VP+ AP
Sbjct: 10 EQPEVPLEAP 19


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 1 QEPLVPVAAP 10
++P VP+ AP
Sbjct: 10 EQPEVPLEAP 19


>sp|FWDC_METTH|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 1 QEPLVPVAAP 10
++P VP+ AP
Sbjct: 10 EQPEVPLEAP 19


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QEPLVPVAA 9
QEPLVP A
Sbjct: 320 QEPLVPPRA 328


>sp|KHSE_HALMA|HOMOSERINE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QEPLVPVAA 9
+E LVP+AA
Sbjct: 109 REELVPIAA 117


>sp|KHSE_NATPD|HOMOSERINE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QEPLVPVAA 9
+E LVP+AA
Sbjct: 109 REELVPIAA 117


>sp|RS2_METB6|SMALL ribosomal subunit protein uS2|Methanoregula boonei (strain DSM

Query: 1 QEPLVPV 7
+EPL+PV
Sbjct: 12 KEPLIPV 18




254|Sequence|1266|1275|PVAAPMPQSG

***** No hits found ******


255|Sequence|1271|1280|MPQSGPQPNL

>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PQSGPQPN 9
P+SG QP+
Sbjct: 37 PESGGQPS 44


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 2 PQSGPQPN 9
P+SG QP+
Sbjct: 37 PESGGQPS 44


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 2 PQSGPQPN 9
P+SG QP+
Sbjct: 37 PESGGQPS 44


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 PQSGPQPNL 10
P+S P+PN+
Sbjct: 138 PKSLPRPNI 146


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 PQSGPQPNL 10
P+S P+PN+
Sbjct: 138 PKSLPRPNI 146




256|Sequence|1276|1285|PQPNLETPPQ

>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 1 PQPNLETPPQ 10
PQ N+E PP+
Sbjct: 248 PQNNVEDPPR 257


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 3 PNLETPP 9
P LETPP
Sbjct: 281 PMLETPP 287


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PQPNLETPP 9
P+P+ + PP
Sbjct: 168 PEPDQDLPP 176


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQPNLETPP 9
P PN E PP
Sbjct: 515 PDPNEEKPP 523


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 3 PNLETPP 9
P LETPP
Sbjct: 281 PMLETPP 287


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 PNLETPP 9
P LETPP
Sbjct: 329 PMLETPP 335


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 3 PNLETPPQ 10
PN ET P+
Sbjct: 168 PNFETDPK 175


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 1 PQPNLETP 8
P+P+ ETP
Sbjct: 808 PEPDTETP 815


Query: 1 PQPNLETP 8
P+P+ ETP
Sbjct: 815 PEPDTETP 822


Query: 1 PQPNLETP 8
P+P+ ETP
Sbjct: 822 PEPDTETP 829


Query: 1 PQPNLETP 8
P+P+ ETP
Sbjct: 829 PEPDTETP 836


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PNLETPP 9
PN++ PP
Sbjct: 748 PNIDIPP 754


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 2 QPNLETPP 9
QP E PP
Sbjct: 280 QPEAEAPP 287


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 4 NLETPP 9
NL+TPP
Sbjct: 628 NLQTPP 633


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 PQPNLETP 8
P PN+E P
Sbjct: 33 PTPNVEIP 40


>sp|CSG_HALJT|CELL surface glycoprotein|Haloarcula japonica (strain ATCC 49778

Query: 1 PQPNLETP 8
P+P+ +TP
Sbjct: 795 PEPDTDTP 802


Query: 1 PQPNLETP 8
P+P+ +TP
Sbjct: 816 PEPDTDTP 823


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PNLETPPQ 10
P+L TPP+
Sbjct: 67 PSLYTPPE 74


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PQPNLETPP 9
P P+ ETPP
Sbjct: 218 PCPHRETPP 226


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 NLETPPQ 10
NLE PP+
Sbjct: 40 NLELPPE 46




257|Sequence|1281|1290|ETPPQPPPRS

>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 1 ETPPQP 6
E+PPQP
Sbjct: 116 ESPPQP 121


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ETPPQPPPRS 10
E PP+ PP++
Sbjct: 322 EEPPEQPPKN 331


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 ETPPQP 6
E+PPQP
Sbjct: 116 ESPPQP 121


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 1 ETPPQP 6
E+PPQP
Sbjct: 116 ESPPQP 121


>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 1 ETPPQPPPR 9
E PPQ PR
Sbjct: 158 EIPPQKVPR 166


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPQPPPRS 10
PP+P P S
Sbjct: 586 PPEPKPLS 593


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPQPPPR 9
PP+P PR
Sbjct: 261 PPKPLPR 267


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ETPPQPPPRS 10
ETPP PR+
Sbjct: 24 ETPPLVAPRA 33


>sp|TRPC_PYRAR|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TPPQPPPRS 10
T P PP RS
Sbjct: 17 TEPSPPARS 25


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ETPPQPPP 8
E P PPP
Sbjct: 179 EKNPNPPP 186


>sp|IF1A_METMP|TRANSLATION initiation factor 1A|Methanococcus maripaludis (strain DSM 14266

Query: 1 ETPPQPPPR 9
+TPPQ P R
Sbjct: 5 QTPPQQPTR 13


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 TPPQPPPRS 10
T PQP P S
Sbjct: 304 TSPQPQPES 312


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPQPP 7
PP PP
Sbjct: 829 PPLPP 833


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 ETPPQPP 7
+ PP+PP
Sbjct: 368 KAPPRPP 374


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TPPQPPPRS 10
T P PP RS
Sbjct: 17 TEPPPPARS 25


>sp|CBIA_HALSA|COBYRINATE a,c-diamide synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TPPQPP 7
TPP+PP
Sbjct: 227 TPPRPP 232


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ETPPQPPPR 9
E P QP PR
Sbjct: 274 EEPKQPFPR 282




258|Sequence|1286|1295|PPPRSRSSHS

>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 1 PPPRSRSSHS 10
PPP S HS
Sbjct: 329 PPPNSAIPHS 338


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PPPRSRSSHS 10
PP +S+HS
Sbjct: 8 PPGSGKSTHS 17


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPPRSRSSH 9
PPP SH
Sbjct: 18 PPPSKSGSH 26


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 PPPRSRSSHS 10
PP +S+HS
Sbjct: 8 PPGSGKSTHS 17




259|Sequence|1291|1300|RSSHSLPSEA

>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SSHSLPSE 9
SSH +PSE
Sbjct: 72 SSHLIPSE 79




260|Sequence|1296|1305|LPSEASSQPQ

>sp|RS3A_ARCFU|SMALL ribosomal subunit protein eS1|Archaeoglobus fulgidus (strain ATCC

Query: 2 PSEASSQP 9
P+EA +QP
Sbjct: 197 PAEAETQP 204




261|Sequence|1301|1310|SSQPQVKTNG

>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SSQPQVKT 8
+ QPQ+KT
Sbjct: 54 TPQPQIKT 61




262|Sequence|1306|1315|VKTNGISDGK

>sp|RNZ_NATPD|RIBONUCLEASE Z|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VKTNGISDGK 10
V NG+SDG+
Sbjct: 113 VHVNGVSDGQ 122


>sp|RS19_NITMS|SMALL ribosomal subunit protein uS19|Nitrosopumilus maritimus (strain

Query: 3 TNGISDGK 10
T GI+DGK
Sbjct: 36 TRGITDGK 43


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 VKTNGISDG 9
V+T+G+S G
Sbjct: 446 VRTDGVSTG 454


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 1 VKTNGISDGK 10
V NGI+D K
Sbjct: 412 VTENGIADSK 421


>sp|RS19_CENSY|SMALL ribosomal subunit protein uS19|Cenarchaeum symbiosum (strain A)

Query: 3 TNGISDGK 10
T GI+DGK
Sbjct: 36 TRGITDGK 43


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KTNGISDGK 10
K NG++DG+
Sbjct: 169 KCNGMADGR 177


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 1 VKTNGISD 8
+K NG+SD
Sbjct: 216 LKNNGLSD 223




263|Sequence|1311|1320|ISDGKRESPL

>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 3 DGKRESP 9
DGKRE P
Sbjct: 122 DGKREHP 128


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GKRESPL 10
G+RESPL
Sbjct: 78 GERESPL 84


>sp|THIM_METLZ|HYDROXYETHYLTHIAZOLE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ISDGKR 6
ISDGKR
Sbjct: 171 ISDGKR 176


>sp|FLAB5_THEKO|FLAGELLIN B5|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ISDGKR 6
ISDGKR
Sbjct: 98 ISDGKR 103


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISDGKRESP 9
+SDGK E P
Sbjct: 668 LSDGKIEHP 676


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DGKRESPL 10
DGK E PL
Sbjct: 425 DGKAEMPL 432




264|Sequence|1316|1325|RESPLKIDPF

>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ESPLKIDPF 10
E PL IDP+
Sbjct: 249 EYPLSIDPY 257


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ESPLKIDPF 10
E PL IDP+
Sbjct: 250 EYPLSIDPY 258


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ESPLKIDPF 10
E PL IDP+
Sbjct: 249 EYPLSIDPY 257


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ESPLKIDP 9
E PL IDP
Sbjct: 251 ERPLSIDP 258


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESPLKIDP 9
E PL IDP
Sbjct: 251 EHPLSIDP 258


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RESPLKIDPF 10
R P+KIDP+
Sbjct: 33 RVIPIKIDPY 42


>sp|Y1656_ARCFU|UNCHARACTERIZED protein AF_1656|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RESPLKID 8
+ESP+KID
Sbjct: 52 KESPVKID 59


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 RESPLKIDPF 10
RE+ L IDP+
Sbjct: 16 REAVLNIDPY 25


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RESPLKIDP 9
R SP+ +DP
Sbjct: 574 RSSPINVDP 582


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ESPLKIDP 9
E PL IDP
Sbjct: 250 EYPLSIDP 257


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESPLKIDP 9
E PL IDP
Sbjct: 250 ERPLGIDP 257


>sp|AHBA_METBF|SIROHEME decarboxylase alpha subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 RESPLKIDPF 10
+E PL+++PF
Sbjct: 47 QEVPLEVEPF 56


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ESPLKIDP 9
E PL IDP
Sbjct: 250 EYPLSIDP 257


>sp|THI4_SULTO|THIAMINE thiazole synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RESPLKI 7
RE+PLK+
Sbjct: 141 RENPLKV 147


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SPLKIDPF 10
+ LK+DPF
Sbjct: 173 TSLKVDPF 180


>sp|PURO_METKA|IMP cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 RESPLKIDP 9
RE PL+ DP
Sbjct: 165 REDPLECDP 173


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RESPLKIDPF 10
RE+ ++++PF
Sbjct: 96 REAEIRVEPF 105


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 4 PLKIDP 9
PLKIDP
Sbjct: 255 PLKIDP 260


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ESPLKIDPF 10
E+PL +PF
Sbjct: 324 ENPLTYEPF 332


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 2 ESPLKIDPF 10
E+ +KIDP+
Sbjct: 115 ETVIKIDPY 123


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RESPLKIDPF 10
R + +KIDP+
Sbjct: 33 RVTAIKIDPY 42


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ESPLKIDPF 10
E PL ID F
Sbjct: 248 EEPLDIDEF 256


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RESPLKIDPF 10
R + +KIDP+
Sbjct: 34 RTTNIKIDPY 43


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RESPLKIDPF 10
R + +KIDP+
Sbjct: 34 RTTNIKIDPY 43


>sp|KHSE_PYRNV|HOMOSERINE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RESPLKIDP 9
RE+ L++DP
Sbjct: 100 REAGLRVDP 108


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 1 RESPLKIDPF 10
R+ PLK D F
Sbjct: 18 RKQPLKKDTF 27


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 2 ESPLKIDPF 10
++P+K+D F
Sbjct: 76 DNPIKVDKF 84




265|Sequence|1321|1330|KIDPFEDLSF

>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KIDPFEDLSF 10
K+ P+EDLSF
Sbjct: 634 KVAPWEDLSF 643


>sp|Y830_PYRAE|PROTEIN PAE0830|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IDPFEDLSF 10
++PF+DL+F
Sbjct: 62 VEPFKDLAF 70


>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 1 KIDPFEDLS 9
+IDP E+LS
Sbjct: 150 RIDPVEELS 158


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KIDPFEDLSF 10
KI+PFE L +
Sbjct: 376 KIEPFEALHY 385


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 PFEDLSF 10
P+EDLSF
Sbjct: 677 PWEDLSF 683


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 KIDPFEDLSF 10
+ID FE+L F
Sbjct: 8 EIDEFEELGF 17


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 DPFEDLSF 10
DPF+ LSF
Sbjct: 555 DPFQALSF 562


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 KIDPFEDLSF 10
K +P ED+SF
Sbjct: 213 KGEPVEDISF 222


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 4 PFEDLSF 10
P EDLSF
Sbjct: 316 PLEDLSF 322


>sp|MFNA_METBF|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina barkeri (strain

Query: 1 KIDPFEDLS 9
++DP E+LS
Sbjct: 188 QVDPIEELS 196


>sp|OTC_METBF|ORNITHINE carbamoyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPFEDLSF 10
D FEDL F
Sbjct: 146 DKFEDLKF 153


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DPFEDLSF 10
+P+++LSF
Sbjct: 25 EPYDELSF 32


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 2 IDPFEDLS 9
+DP E+LS
Sbjct: 177 VDPIEELS 184


>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 3 DPFEDLSF 10
DP ED+ F
Sbjct: 127 DPVEDVKF 134


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 IDPFEDL 8
I+PFE+L
Sbjct: 901 IEPFEEL 907


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 2 IDPFEDLSF 10
+D ED+SF
Sbjct: 16 VDALEDVSF 24




266|Sequence|1326|1335|EDLSFNLLAV

>sp|Y1147_METJA|UNCHARACTERIZED protein MJ1147|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDLSFNLLA 9
+D+SFNLL+
Sbjct: 201 DDISFNLLS 209


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DLSFNLLA 9
D+SFN LA
Sbjct: 117 DVSFNALA 124


>sp|RL1_SULTO|LARGE ribosomal subunit protein uL1|Sulfurisphaera tokodaii (strain DSM

Query: 1 EDLSFNLLAV 10
EDL+ N LAV
Sbjct: 177 EDLAENALAV 186




267|Sequence|1331|1340|NLLAVSKAQL

***** No hits found ******


268|Sequence|1336|1345|SKAQLSVQTS

***** No hits found ******


269|Sequence|1341|1350|SVQTSPVPTP

>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SVQTSPVPT 9
S+Q+SP+PT
Sbjct: 293 SMQSSPIPT 301


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SVQTSPVPTP 10
SV+ SP P P
Sbjct: 74 SVEISPAPRP 83


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VQTSPVP 8
VQT PVP
Sbjct: 277 VQTEPVP 283


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain

Query: 1 SVQTSPVPTP 10
++ SPVP P
Sbjct: 82 NITVSPVPDP 91


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VQTSPVP 8
VQT PVP
Sbjct: 277 VQTEPVP 283


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 SVQTSPVPTP 10
SV +PVP P
Sbjct: 136 SVSETPVPLP 145




270|Sequence|1346|1355|PVPTPDPKRL

>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VPTPDPKR 9
VP+PDPKR
Sbjct: 165 VPSPDPKR 172


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPTPDPKRL 10
VP+PDP+++
Sbjct: 156 VPSPDPRQI 164


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPTPDPK 8
VP+PDPK
Sbjct: 165 VPSPDPK 171


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 2 VPTPDPKRL 10
+P PDPK+L
Sbjct: 375 IPQPDPKKL 383


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VPTPDPK 8
VP+PDPK
Sbjct: 165 VPSPDPK 171


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VPTPDPK 8
VP+PDPK
Sbjct: 165 VPSPDPK 171


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVPTPDPKRL 10
PVP DPK L
Sbjct: 479 PVPQVDPKDL 488


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 VPTPDPKRL 10
+PTPD RL
Sbjct: 194 MPTPDEIRL 202


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVPTPDP 7
P P P+P
Sbjct: 154 PTPAPEP 160


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PVPTPDPK 8
P PT DPK
Sbjct: 97 PHPTGDPK 104


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 4 TPDPKRL 10
T DPKRL
Sbjct: 232 TVDPKRL 238


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 TPDPKRL 10
TPDP R+
Sbjct: 20 TPDPARV 26


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 PVPTPD 6
PVP PD
Sbjct: 108 PVPKPD 113


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 2 VPTPDPKRL 10
VP PDP+ L
Sbjct: 377 VPEPDPEDL 385


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 TPDPK 8
TPDPK
Sbjct: 33 TPDPK 37


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PTPDPK 8
P PDPK
Sbjct: 283 PYPDPK 288


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 PVPTPDPKRL 10
PV PD KRL
Sbjct: 17 PVWHPDEKRL 26


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VPTPDPKRL 10
+PT PK+L
Sbjct: 89 IPTVGPKKL 97


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 1 PVPTPDPK 8
P P P+PK
Sbjct: 24 PSPLPEPK 31


>sp|PUR2_METM5|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C5 /

Query: 2 VPTPDPKRL 10
+PT PK+L
Sbjct: 89 IPTVGPKKL 97


>sp|PUR2_METMP|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VPTPDPKRL 10
+PT PK+L
Sbjct: 89 IPTVGPKKL 97


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 2 VPTPDPKRL 10
+PT PK+L
Sbjct: 89 IPTVGPKKL 97


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PTPDPK 8
P PDPK
Sbjct: 285 PYPDPK 290


>sp|LYSY_SULTO|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PTPDPK 8
P PDPK
Sbjct: 282 PYPDPK 287




271|Sequence|1351|1360|DPKRLIQLPS

>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DPKRLIQLP 9
DPKRL+++P
Sbjct: 234 DPKRLVRIP 242


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 DPKRLIQLP 9
D KRLI+LP
Sbjct: 302 DIKRLIRLP 310


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 1 DPKRLIQLPS 10
D KR+++LPS
Sbjct: 286 DLKRILRLPS 295


>sp|PRIS_ARCFU|DNA primase small subunit PriS|Archaeoglobus fulgidus (strain ATCC

Query: 1 DPKRLIQLP 9
D KRLI+LP
Sbjct: 249 DVKRLIRLP 257


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPKRLIQLPS 10
D KR+++LPS
Sbjct: 286 DIKRILRLPS 295


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 DPKRLIQLPS 10
D KR+++LPS
Sbjct: 286 DLKRILRLPS 295


>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DPKRLIQLPS 10
DP+R+I+L S
Sbjct: 33 DPERIIKLGS 42


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 1 DPKRLIQLPS 10
D KR+++LPS
Sbjct: 286 DLKRILRLPS 295


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 1 DPKRLIQLPS 10
D KR+++LPS
Sbjct: 280 DLKRILRLPS 289


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPKRLIQLP 9
D KRLI+LP
Sbjct: 312 DIKRLIRLP 320


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 1 DPKRLIQLPS 10
D KR++++PS
Sbjct: 282 DVKRILRVPS 291


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 1 DPKRLIQLPS 10
D KR++++PS
Sbjct: 284 DVKRILRVPS 293


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 PKRLIQLPS 10
P R++ LPS
Sbjct: 305 PPRIVSLPS 313


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DPKRLIQLP 9
D RLI+LP
Sbjct: 294 DTNRLIRLP 302


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 1 DPKRLIQLP 9
D +RLI+LP
Sbjct: 294 DTRRLIRLP 302


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 DPKRLIQLP 9
D +RLI+LP
Sbjct: 295 DTRRLIRLP 303


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 DPKRLIQLP 9
D RLI+LP
Sbjct: 300 DTNRLIRLP 308


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 DPKRLIQLP 9
D RLI+LP
Sbjct: 300 DTNRLIRLP 308


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PKRLIQLP 9
PK L++LP
Sbjct: 285 PKELLELP 292


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 DPKRLIQLPS 10
D KR+++LPS
Sbjct: 280 DLKRILRLPS 289


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DPKRLIQLP 9
DPK ++++P
Sbjct: 27 DPKDIVEIP 35


>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 1 DPKRLIQLP 9
D RLI+LP
Sbjct: 301 DTNRLIRLP 309


>sp|RL2_CALMQ|LARGE ribosomal subunit protein uL2|Caldivirga maquilingensis (strain

Query: 1 DPKRLIQLPS 10
D L+QLPS
Sbjct: 137 DSTTLVQLPS 146


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro

Query: 1 DPKRLIQLP 9
DPK ++++P
Sbjct: 37 DPKPVVEIP 45


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DPKRLIQL 8
+PKRL+++
Sbjct: 217 EPKRLVEM 224


>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM 2475

Query: 3 KRLIQLPS 10
K LIQLPS
Sbjct: 140 KTLIQLPS 147




272|Sequence|1356|1365|IQLPSATQSN

>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 IQLPSATQSN 10
I LPS T+SN
Sbjct: 39 ISLPSRTKSN 48




273|Sequence|1361|1370|ATQSNVLSSV

>sp|CAS6B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Saccharolobus solfataricus (strain ATCC

Query: 1 ATQSNVLSSV 10
+TQ+NVLS V
Sbjct: 88 STQANVLSEV 97


>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 ATQSNVLSSV 10
ATQ++ LSSV
Sbjct: 723 ATQTDTLSSV 732


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 ATQSNVLSSV 10
ATQ++ LSSV
Sbjct: 723 ATQTDTLSSV 732




274|Sequence|1366|1375|VLSSVSCMPT

>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 SSVSCMP 9
SS+SC+P
Sbjct: 299 SSISCLP 305


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 1 VLSSVSCM 8
V+SSVSC+
Sbjct: 137 VVSSVSCI 144


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VLSSVSCM 8
V+SSVSC+
Sbjct: 137 VVSSVSCI 144


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VLSSVSCM 8
V+SSVSC+
Sbjct: 137 VVSSVSCI 144


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLSSVSCMP 9
++ +SCMP
Sbjct: 125 IIIGISCMP 133




275|Sequence|1371|1380|SCMPTMPPIP

>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 4 PTMPPIP 10
PTMP +P
Sbjct: 380 PTMPALP 386


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PTMPP 8
PTMPP
Sbjct: 166 PTMPP 170


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SCMPTMP 7
SC+PT P
Sbjct: 209 SCVPTYP 215


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 SCMPTMPPIP 10
+C+ + PPIP
Sbjct: 67 TCLTSKPPIP 76


>sp|CS1F2_THETK|CRISPR-ASSOCIATED endonuclease Cas1/endonuclease Cas2 fusion|Thermoproteus tenax

Query: 4 PTMPPIP 10
PT PP+P
Sbjct: 135 PTHPPVP 141


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SCMPTMPPIP 10
SC MP +P
Sbjct: 133 SCQEIMPGVP 142


>sp|SODF_PYRAE|SUPEROXIDE dismutase [Fe]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 TMPPIP 10
T+PP+P
Sbjct: 8 TLPPLP 13


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 SCMPTMPPIP 10
SC MP +P
Sbjct: 133 SCQEIMPGVP 142


>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 6 MPPIP 10
MPPIP
Sbjct: 143 MPPIP 147




276|Sequence|1376|1385|MPPIPARSQS

>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PPIPARSQS 10
PPIP SQS
Sbjct: 199 PPIPVNSQS 207


>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MPPIPA 6
MPPIPA
Sbjct: 143 MPPIPA 148


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MPPIPARSQS 10
+PPIP S S
Sbjct: 198 LPPIPVNSDS 207


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 MPPIPAR 7
+PP+PAR
Sbjct: 552 LPPLPAR 558


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 MPPIPAR 7
+PP+PAR
Sbjct: 550 IPPLPAR 556


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 2 PPIPARS 8
PP+P+R+
Sbjct: 139 PPLPSRT 145


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPIPARS 8
PP PARS
Sbjct: 19 PPPPARS 25




277|Sequence|1381|1390|ARSQSQENMR

>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SQSQENMR 10
S+S+ENM+
Sbjct: 382 SESEENMK 389




278|Sequence|1386|1395|QENMRSSPNP

>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QENMRSSPN 9
+EN R SPN
Sbjct: 125 RENQRLSPN 133


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ENMRSSPNP 10
EN+R S NP
Sbjct: 224 ENVRCSVNP 232


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 MRSSPNP 10
MR++PNP
Sbjct: 115 MRAAPNP 121




279|Sequence|1391|1400|SSPNPFITGL

>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SPNPFITG 9
SP PF+TG
Sbjct: 571 SPVPFVTG 578


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 PNPFITG 9
PNPFI G
Sbjct: 377 PNPFIEG 383


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 2 SPNPFITG 9
SP PFI G
Sbjct: 133 SPAPFIHG 140


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 2 SPNPF 6
SPNPF
Sbjct: 136 SPNPF 140


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain ATCC

Query: 2 SPNPF 6
SPNPF
Sbjct: 142 SPNPF 146


>sp|DGGGP_NATPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SSPNPFITGL 10
SSP P++ GL
Sbjct: 214 SSPLPYLLGL 223


>sp|DGGGP_HYPBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 2 SPNPFITGL 10
SP P+I+G+
Sbjct: 233 SPFPYISGV 241


>sp|Y1024_METJA|UNCHARACTERIZED protein MJ1024|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SSPNPFIT 8
SPNP IT
Sbjct: 129 KSPNPIIT 136


>sp|CAS4_HALVD|CRISPR-ASSOCIATED exonuclease Cas4|Haloferax volcanii (strain ATCC 29605

Query: 2 SPNPFITGL 10
SPN ITGL
Sbjct: 20 SPNVPITGL 28


>sp|SYY_METVS|TYROSINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 NPFITGL 10
NP +TGL
Sbjct: 206 NPILTGL 212


>sp|AQPM_METTM|AQUAPORIN AqpM|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 SSPNPF 6
+SPNPF
Sbjct: 37 TSPNPF 42


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 4 NPFITGL 10
NPFIT +
Sbjct: 98 NPFITNM 104




280|Sequence|1396|1405|FITGLTRTNP

>sp|RNFE_METAC|ION-TRANSLOCATING oxidoreductase complex subunit E|Methanosarcina acetivorans

Query: 1 FITGLTRTNP 10
FI G+T+ NP
Sbjct: 15 FIRGITKDNP 24


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 3 TGLTRT 8
TGLTRT
Sbjct: 144 TGLTRT 149


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 TGLTRT 8
TGLTRT
Sbjct: 144 TGLTRT 149


>sp|G3P_METS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TGLTRT 8
TGLTRT
Sbjct: 144 TGLTRT 149


>sp|G3P_THEAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ITGLTRTNP 10
+TG+ +T P
Sbjct: 28 VTGIVKTKP 36


>sp|TRPD_METST|ANTHRANILATE phosphoribosyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 2 ITGLTRT 8
ITGLTR+
Sbjct: 55 ITGLTRS 61


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain

Query: 1 FITGLTRTNP 10
F TGL NP
Sbjct: 79 FATGLKLANP 88


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GLTRTNP 10
GLTRT P
Sbjct: 270 GLTRTTP 276




281|Sequence|1401|1410|TRTNPFSDRT

>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 1 TRTNPFSD 8
+RTNPF D
Sbjct: 69 SRTNPFKD 76


>sp|TSR3_SACI7|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 4 NPFSDRT 10
NPFS+RT
Sbjct: 39 NPFSERT 45


>sp|TSR3_SACI6|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 4 NPFSDRT 10
NPFS+RT
Sbjct: 39 NPFSERT 45


>sp|TSR3_SACI4|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 4 NPFSDRT 10
NPFS+RT
Sbjct: 39 NPFSERT 45


>sp|TSR3_SACI2|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 4 NPFSDRT 10
NPFS+RT
Sbjct: 39 NPFSERT 45


>sp|TSR3_SACI1|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 4 NPFSDRT 10
NPFS+RT
Sbjct: 39 NPFSERT 45


>sp|TSR3_SACI3|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 4 NPFSDRT 10
NPFS+RT
Sbjct: 39 NPFSERT 45


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 1 TRTNPFSD 8
TRT PFS+
Sbjct: 201 TRTGPFSE 208


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TRTNPFSDR 9
TR+ PF DR
Sbjct: 355 TRSTPFLDR 363


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 TRTNPFSDRT 10
T+T PF+ +T
Sbjct: 60 TKTAPFTKKT 69


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 TRTNPFSD 8
TRT PF +
Sbjct: 162 TRTGPFDE 169




282|Sequence|1406|1415|FSDRTAAPGN

>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FSDRTAAPGN 10
FSDR PG
Sbjct: 168 FSDRKTGPGT 177


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 FSDRTAAPGN 10
FSD PGN
Sbjct: 27 FSDVMEGPGN 36


>sp|MALE_PYRAB|MALTOTRIOSE-BINDING protein|Pyrococcus abyssi (strain GE5 /

Query: 1 FSDRTAAPG 9
F D+T PG
Sbjct: 247 FDDKTEQPG 255


>sp|MALE_PYRFU|MALTOTRIOSE-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FSDRTAAPG 9
F D+T PG
Sbjct: 228 FDDKTEQPG 236


>sp|Y1661_ARCFU|UNCHARACTERIZED protein AF_1661|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FSDRTAAPG 9
FSD APG
Sbjct: 26 FSDTEMAPG 34




283|Sequence|1411|1420|AAPGNPFRAK

>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 APGNPFRAK 10
APG P R +
Sbjct: 35 APGTPLRGR 43


>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 3 PGNPFRA 9
PGN FRA
Sbjct: 213 PGNIFRA 219


>sp|RS4_AERPE|SMALL ribosomal subunit protein uS4|Aeropyrum pernix (strain ATCC 700893

Query: 2 APGNPFRAK 10
APG+PF+ +
Sbjct: 156 APGSPFKER 164


>sp|AROB_THEKO|3-DEHYDROQUINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GNPFRAK 10
G+PFRA+
Sbjct: 274 GHPFRAE 280


>sp|RL10_AERPE|LARGE ribosomal subunit protein uL10|Aeropyrum pernix (strain ATCC 700893

Query: 2 APGNPFR 8
A GNPF+
Sbjct: 98 ADGNPFK 104




284|Sequence|1416|1425|PFRAKSEESE

>sp|Y1084_METPE|UPF0212 protein Mpal_1084|Methanosphaerula palustris (strain ATCC

Query: 2 FRAKSEE 8
FRA+SEE
Sbjct: 79 FRAESEE 85


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 PFRAKSEESE 10
PFR S E+E
Sbjct: 142 PFRPMSRETE 151




285|Sequence|1421|1430|SEESEATSWF

>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 SEESEATSWF 10
+EESE T W+
Sbjct: 192 AEESEHTGWY 201


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SEESEATSWF 10
+ E+EA W+
Sbjct: 476 AHENEANKWY 485


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EESEATSWF 10
+E+EA WF
Sbjct: 302 KEAEAILWF 310




286|Sequence|1426|1435|ATSWFSKEEP

>sp|DAPB_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ATSWFSKEEP 10
A W K+EP
Sbjct: 243 AAEWICKQEP 252


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 3 SWFSKEEP 10
SWFS++ P
Sbjct: 574 SWFSEQLP 581


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ATSWFSKEEP 10
T W S+E+P
Sbjct: 463 VTGWLSREDP 472


>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WFSKEEP 10
W SKEEP
Sbjct: 108 WVSKEEP 114


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ATSWFSKEEP 10
A S+F+K EP
Sbjct: 452 ANSYFNKSEP 461


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 2 TSWFSKEE 9
T W KEE
Sbjct: 1004 TEWIKKEE 1011


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WFSKEE 9
W SKEE
Sbjct: 694 WISKEE 699


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 SWFSKEEP 10
+W KEEP
Sbjct: 847 AWIGKEEP 854


>sp|YORA_PYRWO|UNCHARACTERIZED 24.7 kDa protein in|Pyrococcus woesei

Query: 3 SWFSK 7
SWFSK
Sbjct: 179 SWFSK 183


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 SWFSKEEP 10
+WFS++ P
Sbjct: 244 AWFSQDVP 251


>sp|BRIX_METBF|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 2 TSWFSKE 8
T W+SKE
Sbjct: 77 TDWYSKE 83


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 3 SWFSKEE 9
+WF+KE+
Sbjct: 343 NWFAKEK 349




287|Sequence|1431|1440|SKEEPVTISP

>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EEPVTISP 10
EEP+T++P
Sbjct: 214 EEPITVNP 221


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EPVTISP 10
EPVT+SP
Sbjct: 151 EPVTVSP 157


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 SKEEPVTISP 10
S PVTISP
Sbjct: 7 SNRLPVTISP 16


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 2 KEEPVTISP 10
KE+P+T P
Sbjct: 234 KEKPITYHP 242


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SKEEPVTISP 10
SKE P TI P
Sbjct: 468 SKEIPFTIEP 477


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 KEEPVTI 8
+EEPVT+
Sbjct: 385 REEPVTV 391




288|Sequence|1436|1445|VTISPFPSLQ

>sp|FTR_METBU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TISPFP 7
TI+PFP
Sbjct: 193 TITPFP 198


>sp|FTR_METBF|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TISPFP 7
TI+PFP
Sbjct: 193 TITPFP 198


>sp|FTR_METAC|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TISPFP 7
TI+PFP
Sbjct: 193 TIAPFP 198


>sp|FTR_METMA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TISPFP 7
TI+PFP
Sbjct: 193 TITPFP 198


>sp|KHSE_SULAC|HOMOSERINE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTISPFP 7
VT+SP P
Sbjct: 153 VTVSPIP 159




289|Sequence|1441|1450|FPSLQPLGHN

>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LQPLGHN 10
+PLGHN
Sbjct: 163 FEPLGHN 169


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FPSLQPLGH 9
F LQPL H
Sbjct: 273 FTDLQPLAH 281


>sp|RL11_THEAC|LARGE ribosomal subunit protein uL11|Thermoplasma acidophilum (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGLN 30


>sp|RL11_PICTO|LARGE ribosomal subunit protein uL11|Picrophilus torridus (strain ATCC

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 21 PALGPLGLN 29


>sp|RL11_THEVO|LARGE ribosomal subunit protein uL11|Thermoplasma volcanium (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGLN 30


>sp|RL11_NITMS|LARGE ribosomal subunit protein uL11|Nitrosopumilus maritimus (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 23 PALGPLGVN 31


>sp|RL11_METTP|LARGE ribosomal subunit protein uL11|Methanothrix thermoacetophila

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGVN 30


>sp|RL11_METBF|LARGE ribosomal subunit protein uL11|Methanosarcina barkeri (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGVN 30


>sp|RL11_METAC|LARGE ribosomal subunit protein uL11|Methanosarcina acetivorans (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGVN 30


>sp|RL11_METBU|LARGE ribosomal subunit protein uL11|Methanococcoides burtonii (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGVN 30


>sp|RL11_METPE|LARGE ribosomal subunit protein uL11|Methanosphaerula palustris (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGIN 30


>sp|RL11_METLZ|LARGE ribosomal subunit protein uL11|Methanocorpusculum labreanum

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGIN 30


>sp|RL11_METKA|LARGE ribosomal subunit protein uL11|Methanopyrus kandleri (strain AV19

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 23 PALGPLGVN 31


>sp|RL11_METMJ|LARGE ribosomal subunit protein uL11|Methanoculleus marisnigri (strain

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGIN 30


>sp|RL11_METMA|LARGE ribosomal subunit protein uL11|Methanosarcina mazei (strain ATCC

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGVN 30


>sp|RL11_METHJ|LARGE ribosomal subunit protein uL11|Methanospirillum hungatei JF-1

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGIN 30


>sp|RL11_METB6|LARGE ribosomal subunit protein uL11|Methanoregula boonei (strain DSM

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGIN 30


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 2 PSLQPLGH 9
P+L PL H
Sbjct: 98 PTLNPLDH 105


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain ATCC

Query: 3 SLQPLGH 9
+++PLGH
Sbjct: 1045 TIEPLGH 1051


>sp|RL11_METAR|LARGE ribosomal subunit protein uL11|Methanocella arvoryzae (strain DSM

Query: 2 PSLQPLGHN 10
P+L PLG N
Sbjct: 22 PALGPLGIN 30


>sp|Y3270_HALS3|UNCHARACTERIZED solute-binding protein OE_3270R|Halobacterium salinarum (strain

Query: 2 PSLQPLGH 9
P+L PLG+
Sbjct: 151 PALDPLGY 158


>sp|Y1595_HALSA|UNCHARACTERIZED solute-binding protein VNG_1595C|Halobacterium salinarum (strain

Query: 2 PSLQPLGH 9
P+L PLG+
Sbjct: 151 PALDPLGY 158


>sp|MOBDB_HALVD|PUTATIVE ABC transporter molybdenum-binding protein|Haloferax volcanii

Query: 2 PSLQPLGH 9
P L PLG+
Sbjct: 152 PDLDPLGY 159




290|Sequence|1446|1455|PLGHNKSRAS

>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 PLGHNKSRAS 10
P GH K RA+
Sbjct: 190 PSGHEKDRAN 199


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PLGHNK 6
PLGHN+
Sbjct: 165 PLGHNE 170


>sp|PIMT_METAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PLGHNKS 7
P+GHN++
Sbjct: 25 PIGHNQT 31


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GHNKSRA 9
GHNK+R
Sbjct: 322 GHNKNRG 328


>sp|ADEC_METKA|ADENINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 PLGHNKSRA 9
P G N+SRA
Sbjct: 47 PAGGNESRA 55


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 GHNKSRAS 10
GHNK++ S
Sbjct: 18 GHNKTKES 25


>sp|MER_METTI|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanolobus tindarius

Query: 1 PLGHNKSRA 9
P+G NK +A
Sbjct: 308 PIGPNKEKA 316


>sp|PELO_META3|PROTEIN pelota homolog|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LGHNKSRAS 10
+GH KSR S
Sbjct: 157 IGHIKSRLS 165




291|Sequence|1451|1460|KSRASSSLDG

***** No hits found ******


292|Sequence|1456|1465|SSLDGFKDSF

>sp|SYR_METHJ|ARGININE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LDGFKDSF 10
LDGFKD+
Sbjct: 232 LDGFKDTL 239


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SLDGFKDSF 10
+L+GFKDS
Sbjct: 281 TLEGFKDSL 289


>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 GFKDSF 10
GFKDSF
Sbjct: 204 GFKDSF 209


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SLDGFKDSF 10
SLDG+++ F
Sbjct: 110 SLDGYRNQF 118


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 SSLDGFK 7
+SLDGFK
Sbjct: 102 ASLDGFK 108


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 SLDGFKDSF 10
+LDGF++S
Sbjct: 277 NLDGFRESL 285


>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 SSLDGFKD 8
SSLD F+D
Sbjct: 101 SSLDTFRD 108


>sp|CMR1A_PYRFU|CRISPR system Cmr subunit Cmr1-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SSLDGFKDSF 10
+S+D FKDS
Sbjct: 180 NSIDEFKDSL 189




293|Sequence|1461|1470|FKDSFDLQGQ

>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 3 DSFDLQG 9
D+FD+QG
Sbjct: 117 DAFDVQG 123


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FKDSFDL 7
F+DS+DL
Sbjct: 735 FEDSYDL 741


>sp|SUI1_METMP|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 2 KDSFDLQG 9
KDS +LQG
Sbjct: 72 KDSIELQG 79


>sp|SUI1_METM7|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 2 KDSFDLQG 9
KDS +LQG
Sbjct: 72 KDSIELQG 79


>sp|SUI1_METM6|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 2 KDSFDLQG 9
KDS +LQG
Sbjct: 72 KDSIELQG 79


>sp|SUI1_METM5|PROTEIN translation factor SUI1 homolog|Methanococcus maripaludis (strain

Query: 2 KDSFDLQG 9
KDS +LQG
Sbjct: 72 KDSIELQG 79


>sp|SUI1_METVA|PROTEIN translation factor SUI1 homolog|Methanococcus vannielii

Query: 2 KDSFDLQG 9
KDS +LQG
Sbjct: 72 KDSIELQG 79


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FKDSFDLQG 9
FK+ +D+ G
Sbjct: 229 FKEEYDIHG 237


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 FDLQGQ 10
FD+QGQ
Sbjct: 80 FDIQGQ 85




294|Sequence|1466|1475|DLQGQSTLKI

>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 QGQSTLKI 10
+GQ TLKI
Sbjct: 252 KGQKTLKI 259


>sp|Y1353_ARCFU|UNCHARACTERIZED protein AF_1353|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLQGQSTLK 9
D+QGQ +K
Sbjct: 81 DIQGQDAVK 89




295|Sequence|1471|1480|STLKISNPKG

>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 2 TLKISNPKG 10
T+ I+NP+G
Sbjct: 23 TIDITNPRG 31


>sp|Y1566_METJA|UNCHARACTERIZED protein MJ1566|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LKISNPK 9
LKI NPK
Sbjct: 6 LKIKNPK 12


>sp|RL6_NANEQ|LARGE ribosomal subunit protein uL6|Nanoarchaeum equitans (strain

Query: 3 LKISNPKG 10
LK+S PKG
Sbjct: 25 LKVSGPKG 32


>sp|RL6_AERPE|LARGE ribosomal subunit protein uL6|Aeropyrum pernix (strain ATCC

Query: 3 LKISNPKG 10
+K+S PKG
Sbjct: 26 VKVSGPKG 33


>sp|RL6_PYRAB|LARGE ribosomal subunit protein uL6|Pyrococcus abyssi (strain GE5 /

Query: 1 STLKISNPKG 10
+T+K+ PKG
Sbjct: 24 NTVKVKGPKG 33


>sp|DPCKG_METAR|GTP-DEPENDENT dephospho-CoA kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 LKISNPKG 10
L++SNP G
Sbjct: 90 LRVSNPAG 97


>sp|RL6_THEKO|LARGE ribosomal subunit protein uL6|Thermococcus kodakarensis (strain

Query: 1 STLKISNPKG 10
+T+K+ PKG
Sbjct: 24 NTVKVKGPKG 33


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 3 LKISNPK 9
LKIS+PK
Sbjct: 334 LKISSPK 340


>sp|RL6_SACS2|LARGE ribosomal subunit protein uL6|Saccharolobus solfataricus (strain

Query: 1 STLKISNPKG 10
S +KI PKG
Sbjct: 23 SIIKIKGPKG 32




296|Sequence|1476|1485|SNPKGWVTFE

>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SNPKGWVTFE 10
+NPKG++ FE
Sbjct: 26 NNPKGYIGFE 35


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 2 NPKGWVTFE 10
+P+GW+ FE
Sbjct: 273 DPEGWIYFE 281


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NPKGWVTFE 10
+P+GW+ FE
Sbjct: 273 DPEGWIYFE 281


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SNPKGWVTFE 10
+P+GW+ FE
Sbjct: 273 DDPEGWIYFE 282


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 2 NPKGW 6
NPKGW
Sbjct: 164 NPKGW 168


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 NPKGW 6
NPKGW
Sbjct: 165 NPKGW 169


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 NPKGW 6
NPKGW
Sbjct: 164 NPKGW 168


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NPKGW 6
NPKGW
Sbjct: 164 NPKGW 168


>sp|Y1290_METJA|UNCHARACTERIZED protein MJ1290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NPKGWVTFE 10
NPKG TF+
Sbjct: 228 NPKGTFTFD 236


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NPKGWVTFE 10
NP+GW TF+
Sbjct: 35 NPRGW-TFK 42


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 2 NPKGW 6
NP+GW
Sbjct: 34 NPRGW 38


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NPKGW 6
NP+GW
Sbjct: 35 NPRGW 39


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 2 NPKGW 6
NP+GW
Sbjct: 34 NPRGW 38


>sp|MFNA_METLZ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocorpusculum labreanum

Query: 3 PKGWV 7
PKGW+
Sbjct: 328 PKGWI 332


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NPKGWV 7
NPK WV
Sbjct: 124 NPKDWV 129


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 NPKGWV 7
+P+GWV
Sbjct: 56 DPQGWV 61


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 SNPKGWV 7
+NPK WV
Sbjct: 283 ANPKYWV 289


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NPKGWVT 8
+PK W+T
Sbjct: 106 DPKAWLT 112


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SNPKGWVTF 9
S+PK W F
Sbjct: 144 SSPKAWFKF 152


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNPKGW 6
+NPK W
Sbjct: 798 ANPKNW 803


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SNPKGWVTFE 10
+NP G++T E
Sbjct: 62 NNPPGYITEE 71


>sp|DTDA_AERPE|D-AMINOACYL-TRNA deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NPKGWVTF 9
NP GW T
Sbjct: 166 NPLGWETL 173


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PKGWVTFE 10
PK ++TFE
Sbjct: 528 PKNFLTFE 535


>sp|DPCKG_PYRAR|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SNPKGWVT 8
+NP G++T
Sbjct: 90 NNPPGYIT 97


>sp|DPCKG_PYRCJ|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 NPKGWVTFE 10
NP G++T E
Sbjct: 91 NPPGYITDE 99


>sp|DPCKG_PYRIL|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 NPKGWVTFE 10
NP G++T E
Sbjct: 91 NPPGYITEE 99


>sp|DPCKG_PYRNV|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 NPKGWVT 8
NP G++T
Sbjct: 91 NPPGYIT 97




297|Sequence|1481|1490|WVTFEEEEDF

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 WVTFEEEED 9
W+ EEEED
Sbjct: 646 WLDAEEEED 654


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FEEEED 9
FEEEED
Sbjct: 221 FEEEED 226


>sp|RS15_METS3|SMALL ribosomal subunit protein uS15|Methanobrevibacter smithii (strain

Query: 1 WVTFEEEE 8
WVT+ +EE
Sbjct: 6 WVTYSDEE 13


>sp|DPCKG_IGNH4|GTP-DEPENDENT dephospho-CoA kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WVTFEEEEDF 10
WV E EED
Sbjct: 96 WVKVEGEEDL 105


>sp|Y681_PYRAE|UPF0179 protein PAE0681|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VTFEEE 7
VTFEEE
Sbjct: 92 VTFEEE 97


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 1 WVTFEEEED 9
+VTF+E+ D
Sbjct: 250 YVTFKEDTD 258


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 1 WVTFEEE 7
WV++E+E
Sbjct: 143 WVSYEDE 149


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 4 FEEEEDF 10
FEEE DF
Sbjct: 112 FEEENDF 118


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WVTFEEEED 9
WV+ E+ED
Sbjct: 372 WVSLSEKED 380


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 1 WVTFEEEED 9
W T + EED
Sbjct: 196 WDTVDREED 204




298|Sequence|1486|1495|EEEDFGVKGK

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEDFGVKGK 10
+EDFG GK
Sbjct: 1375 KEDFGTLGK 1383


>sp|PYRE_ARCFU|OROTATE phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEEDFGVKG 9
E++D+G+KG
Sbjct: 94 EKKDYGIKG 102


>sp|TRPD_METJA|ANTHRANILATE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 EEEDFGVK 8
E EDFG+K
Sbjct: 247 EPEDFGIK 254


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 2 EEDFGVKGK 10
E +FGV+GK
Sbjct: 40 EREFGVEGK 48


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|COMD_METTH|SULFOPYRUVATE decarboxylase subunit alpha|Methanothermobacter

Query: 1 EEEDFGV 7
EEE FGV
Sbjct: 50 EEEGFGV 56


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 2 EEDFGVKGK 10
E+DFG+K K
Sbjct: 161 EDDFGLKPK 169


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EDFGVK 8
EDFG+K
Sbjct: 68 EDFGIK 73


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 EDFGVKG 9
E+FGVKG
Sbjct: 86 EEFGVKG 92


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 EDFGVKG 9
E FGVKG
Sbjct: 154 EKFGVKG 160


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 3 EDFGVKGK 10
++FGVKG+
Sbjct: 85 DEFGVKGR 92




299|Sequence|1491|1500|GVKGKSKSAC

>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 2 VKGKSKSAC 10
V GK K AC
Sbjct: 154 VDGKGKRAC 162




300|Sequence|1496|1505|SKSACSDLLG

>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 KSACSDLLG 10
+ AC+D+LG
Sbjct: 279 RDACTDILG 287


>sp|NEP1_SACS2|RIBOSOMAL RNA small subunit methyltransferase|Saccharolobus solfataricus

Query: 3 SACSDLLG 10
SAC+ +LG
Sbjct: 209 SACNSILG 216




301|Sequence|1501|1510|SDLLGNQPSS

>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC

Query: 1 SDLLGNQP 8
+DL GN+P
Sbjct: 40 ADLFGNKP 47


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 2 DLLGNQPS 9
DLLG +PS
Sbjct: 196 DLLGAEPS 203




302|Sequence|1506|1515|NQPSSFSGSN

>sp|KAE1_METS5|TRNA N6-adenosine threonylcarbamoyltransferase|Metallosphaera sedula

Query: 3 PSSFSGSN 10
P+SF+G N
Sbjct: 284 PTSFAGDN 291


>sp|DHQS_NATPD|3-DEHYDROQUINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PSSFSGS 9
PS FSGS
Sbjct: 91 PSDFSGS 97


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PSSFSGS 9
PS FSGS
Sbjct: 90 PSDFSGS 96


>sp|FMDC_METBF|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanosarcina barkeri

Query: 2 QPSSFSGSN 10
+P SF+G N
Sbjct: 21 KPGSFTGEN 29


>sp|KAE1_SULAC|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfolobus acidocaldarius

Query: 3 PSSFSGSN 10
PS +SG N
Sbjct: 286 PSQYSGDN 293


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 1 NQPSSFSGS 9
N+P+ F GS
Sbjct: 133 NKPTKFMGS 141




303|Sequence|1511|1520|FSGSNLTLND

>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 SGSNLTLND 10
+G+N+T+ND
Sbjct: 58 AGANITMND 66


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM

Query: 1 FSGSNLTLND 10
F GS + LND
Sbjct: 14 FHGSQVQLND 23


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 3 GSNLTLND 10
G NLT+ND
Sbjct: 401 GENLTVND 408


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 SGSNLTLND 10
SG+ LTL D
Sbjct: 305 SGNTLTLED 313


>sp|HUTH_THEVO|PROBABLE histidine ammonia-lyase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GSNLTLND 10
G NLTL D
Sbjct: 6 GDNLTLED 13




304|Sequence|1516|1525|LTLNDDWNKG

>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 LTLNDDWNKG 10
+T ND WN G
Sbjct: 136 MTANDPWNPG 145


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 TLNDDWN 8
T DDWN
Sbjct: 52 TYRDDWN 58


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 TLNDDWN 8
T DDWN
Sbjct: 52 TYRDDWN 58


>sp|RL23_METMP|LARGE ribosomal subunit protein uL23|Methanococcus maripaludis (strain

Query: 1 LTLNDDWNKG 10
+TL D++N G
Sbjct: 68 ITLKDEYNAG 77


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTLNDDWNK 9
+ LND+W++
Sbjct: 137 IILNDNWSE 145


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 LTLNDDWNK 9
L L+D W K
Sbjct: 535 LALSDSWEK 543


>sp|RS12_METTP|SMALL ribosomal subunit protein uS12|Methanothrix thermoacetophila

Query: 3 LNDDWNK 9
+ DDW K
Sbjct: 11 MEDDWKK 17


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 4 NDDWNKG 10
NDD+N+G
Sbjct: 121 NDDFNEG 127


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 4 NDDWNKG 10
NDD+N+G
Sbjct: 121 NDDFNEG 127


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 1 LTLNDDWN 8
LT ND W+
Sbjct: 143 LTANDPWD 150


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 LTLNDDWNK 9
+T ND W++
Sbjct: 140 MTANDPWDQ 148


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LTLNDDWN 8
+T ND WN
Sbjct: 136 MTANDPWN 143


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LTLNDDWN 8
+T ND WN
Sbjct: 136 MTANDPWN 143


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LTLNDDWN 8
+T ND WN
Sbjct: 136 MTANDPWN 143


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LTLNDDWN 8
+T ND WN
Sbjct: 136 MTANDPWN 143


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 LTLNDDWN 8
+T ND WN
Sbjct: 136 MTANDPWN 143


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LTLNDDWNKG 10
+T ND WN
Sbjct: 136 MTANDPWNPA 145


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTLNDDWN 8
LT ND W+
Sbjct: 137 LTANDPWD 144




305|Sequence|1521|1530|DWNKGTNVSF

>sp|APGM_METM7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C7 /

Query: 1 DWNKGTNV 8
+W KGTN+
Sbjct: 383 NWIKGTNI 390


>sp|APGM_METM5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C5 /

Query: 1 DWNKGTNV 8
+W KGTN+
Sbjct: 383 NWIKGTNI 390


>sp|APGM_METM6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain C6 /

Query: 1 DWNKGTNV 8
+W KGTN+
Sbjct: 383 NWIKGTNI 390


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 3 NKGTNVSF 10
N G NVSF
Sbjct: 252 NTGDNVSF 259


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 3 NKGTNVSF 10
N G NVSF
Sbjct: 251 NTGDNVSF 258


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 3 NKGTNVSF 10
N G NVSF
Sbjct: 251 NTGDNVSF 258


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 3 NKGTNVSF 10
N G NVSF
Sbjct: 251 NTGDNVSF 258


>sp|RFRNP_METTP|RNA-FREE ribonuclease P|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 NKGTNVS 9
NKG NVS
Sbjct: 110 NKGMNVS 116


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DWNKGTNVS 9
DW G NVS
Sbjct: 163 DWLWGINVS 171


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 WNKGTNVS 9
W KG+NV+
Sbjct: 250 WIKGSNVA 257


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DWNKGTNVS 9
DW G NVS
Sbjct: 172 DWLWGINVS 180




306|Sequence|1526|1535|TNVSFCVLPS

>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VSFCVL 8
VSFC+L
Sbjct: 114 VSFCIL 119




307|Sequence|1531|1540|CVLPSRRPPP

>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 3 LPSRRPPP 10
P RRP P
Sbjct: 211 FPGRRPEP 218


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 VLPSRRP 8
VLPS+RP
Sbjct: 197 VLPSKRP 203


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PSRRPP 9
P RRPP
Sbjct: 454 PRRRPP 459


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 3 LPSRRP 8
+PSRRP
Sbjct: 243 IPSRRP 248


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 1 CVLPSRRP 8
C++P+R P
Sbjct: 11 CIMPNRYP 18


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 CVLPSRRP 8
C++P+R P
Sbjct: 10 CIVPNRYP 17


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 CVLPSRRP 8
C++P+R P
Sbjct: 10 CIVPNRYP 17


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 1 CVLPSRRP 8
C++P R P
Sbjct: 9 CIMPHRYP 16


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum (strain

Query: 2 VLPSRRP 8
+LPS RP
Sbjct: 134 ILPSNRP 140




308|Sequence|1536|1545|RRPPPPPVPL

>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 PPPPPVPL 10
PPP P PL
Sbjct: 32 PPPYPAPL 39


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 PPPPVPL 10
PP PVPL
Sbjct: 107 PPEPVPL 113


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRPPPPPVPL 10
R PP P +P+
Sbjct: 102 RVPPKPGIPI 111


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PPPPPVPL 10
PP PP+ L
Sbjct: 59 PPNPPIAL 66


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RPPPPP 7
R PPPP
Sbjct: 154 RIPPPP 159


Query: 1 RRPPPP 6
R PPPP
Sbjct: 154 RIPPPP 159


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 RRPPPPPV 8
R+P PP V
Sbjct: 470 RKPEPPKV 477


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 1 RRPPPPPV 8
+ PP PPV
Sbjct: 368 KAPPRPPV 375


>sp|RNH2_SACS2|RIBONUCLEASE HII|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RRPPPPPV 8
+ P PPP+
Sbjct: 180 KNPNPPPI 187


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPPPPV 8
PP PPV
Sbjct: 94 PPSPPV 99




309|Sequence|1541|1550|PPVPLLPPGT

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 PPVPLLPPG 9
PPVP PP
Sbjct: 443 PPVPETPPA 451


>sp|GATA_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 PPVPLLPP 8
P +P+LPP
Sbjct: 392 PTMPILPP 399


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 PPVPLLPP 8
P +P++PP
Sbjct: 393 PTMPIIPP 400


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 PPVPLLP 7
PP P++P
Sbjct: 305 PPYPIIP 311


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 PVPLLP 7
PVPL+P
Sbjct: 217 PVPLIP 222


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 1 PPVPLLPP 8
P +P+LPP
Sbjct: 388 PTMPILPP 395


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 2 PVPLLPP 8
PVP +PP
Sbjct: 184 PVPEIPP 190


>sp|RRP41_PYRNV|EXOSOME complex component Rrp41|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPVPLLPPG 9
PPVPLL G
Sbjct: 4 PPVPLLQGG 12


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM

Query: 1 PPVPLLPPG 9
PPVPLL G
Sbjct: 4 PPVPLLQNG 12


>sp|RRP41_PYRAE|EXOSOME complex component Rrp41|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPVPLLPPG 9
PPVPLL G
Sbjct: 4 PPVPLLQNG 12


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PPVPLLPPG 9
PPVPLL G
Sbjct: 4 PPVPLLQNG 12


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 3 VPLLPPG 9
VPL PPG
Sbjct: 299 VPLAPPG 305


>sp|RL1_METBF|LARGE ribosomal subunit protein uL1|Methanosarcina barkeri (strain Fusaro

Query: 2 PVPLLP 7
P+PLLP
Sbjct: 131 PIPLLP 136


>sp|RL1_METMA|LARGE ribosomal subunit protein uL1|Methanosarcina mazei (strain ATCC

Query: 2 PVPLLP 7
P+PL+P
Sbjct: 131 PIPLMP 136


>sp|RL1_METAC|LARGE ribosomal subunit protein uL1|Methanosarcina acetivorans (strain

Query: 2 PVPLLP 7
P+PL+P
Sbjct: 131 PIPLMP 136


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 5 LLPPGT 10
+LPPGT
Sbjct: 70 VLPPGT 75


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 2 PVPLLPP 8
P+P +PP
Sbjct: 184 PIPEIPP 190


>sp|PYRF_HALMA|OROTIDINE 5'-phosphate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 1 PPVPLLPPG 9
P +P L PG
Sbjct: 203 PDIPFLVPG 211


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PPVPLL 6
PPVPL+
Sbjct: 254 PPVPLM 259


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PPVPLLPPG 9
PPVPL G
Sbjct: 4 PPVPLFQNG 12


>sp|PYRF_HALLT|OROTIDINE 5'-phosphate decarboxylase|Halorubrum lacusprofundi (strain ATCC

Query: 1 PPVPLLPPG 9
P +P L PG
Sbjct: 198 PEIPFLVPG 206


>sp|Y054_ARCFU|UNCHARACTERIZED protein AF_0054|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPVPLLPPGT 10
PP PL+ P T
Sbjct: 82 PPQPLVQPST 91




310|Sequence|1546|1555|LPPGTSPPVD

>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 3 PGTSPPVD 10
P T PPVD
Sbjct: 81 PNTKPPVD 88


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi (strain

Query: 2 PPGTSPPVD 10
PPG PP D
Sbjct: 223 PPGYEPPRD 231


>sp|LYSK_PYRHO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus horikoshii

Query: 2 PPGTSPPVD 10
PPG PP++
Sbjct: 222 PPGYVPPLE 230


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri

Query: 1 LPPGTSPPV 9
LPPGT+P +
Sbjct: 19 LPPGTAPQI 27


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 3 PGTSPPVD 10
PG S PVD
Sbjct: 479 PGLSEPVD 486


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 PPGTSPP 8
PPG +PP
Sbjct: 222 PPGYNPP 228


>sp|Y1329_PYRAE|PUTATIVE esterase PAE1329|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LPPGTSPP 8
L PG PP
Sbjct: 95 LEPGVKPP 102


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 3 PGTSPPVD 10
PGT+ P D
Sbjct: 132 PGTTEPAD 139


>sp|RS15_PYRHO|SMALL ribosomal subunit protein uS15|Pyrococcus horikoshii (strain ATCC

Query: 2 PPGTSPPV 9
PP T+PP+
Sbjct: 17 PPRTAPPI 24


>sp|RS15_PYRFU|SMALL ribosomal subunit protein uS15|Pyrococcus furiosus (strain ATCC

Query: 2 PPGTSPPV 9
PP T+PP+
Sbjct: 17 PPRTAPPI 24


>sp|RS15_PYRAB|SMALL ribosomal subunit protein uS15|Pyrococcus abyssi (strain GE5 /

Query: 2 PPGTSPPV 9
PP T+PP+
Sbjct: 17 PPRTAPPI 24


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 3 PGTSPPV 9
PGT PPV
Sbjct: 314 PGTLPPV 320


>sp|RS15_THEKO|SMALL ribosomal subunit protein uS15|Thermococcus kodakarensis (strain

Query: 2 PPGTSPP 8
PP T+PP
Sbjct: 17 PPRTAPP 23


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGTSPPVD 10
PG++ PVD
Sbjct: 201 PGSTVPVD 208


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 2 PPGTSPP 8
PPG PP
Sbjct: 222 PPGYMPP 228


>sp|PYRC_PYRAB|DIHYDROOROTASE abyssi (strain GE5 /

Query: 3 PGTSPPV 9
P T PPV
Sbjct: 90 PNTKPPV 96


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 LPPGTSPPV 9
+P GT PP+
Sbjct: 313 MPRGTYPPM 321


>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain NA1)

Query: 2 PPGTSPPVD 10
PP PPV+
Sbjct: 326 PPKKKPPVE 334


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 PGTSPPV 9
PGT PP+
Sbjct: 316 PGTLPPI 322


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 2 PPGTSPPVD 10
PP PPV+
Sbjct: 325 PPKKKPPVE 333


>sp|IPYR_PICTO|INORGANIC pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 LPPGTSPP 8
+PPG +PP
Sbjct: 11 VPPGPNPP 18


>sp|IF2G_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 PPGTSPPV 9
PPG+ PPV
Sbjct: 315 PPGSLPPV 322




311|Sequence|1551|1560|SPPVDPFTTL

>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPVDPFTT 9
PP+ PFTT
Sbjct: 829 PPLPPFTT 836


>sp|AROB_PYRFU|3-DEHYDROQUINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PVDPFTTL 10
P DP+TTL
Sbjct: 283 PFDPYTTL 290


>sp|MT51_METJA|PUTATIVE type II methyltransferase M.MJ0563P|Methanocaldococcus jannaschii

Query: 1 SPPVDPFT 8
SPP +PFT
Sbjct: 74 SPPCEPFT 81


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPVDPFT 8
PPV+P T
Sbjct: 228 PPVEPLT 234


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 1 SPPVDPFT 8
+PP DPF+
Sbjct: 75 NPPKDPFS 82


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PPVDPFT 8
PP DP++
Sbjct: 42 PPCDPYS 48


>sp|GATE_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 PPVDP 6
PPVDP
Sbjct: 434 PPVDP 438


>sp|GATE_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Halobacterium salinarum (strain ATCC

Query: 2 PPVDP 6
PPVDP
Sbjct: 434 PPVDP 438


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 3 PVDPF 7
PVDPF
Sbjct: 141 PVDPF 145


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 2 PPVDPFTTL 10
P +DPF T+
Sbjct: 323 PWIDPFVTM 331


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SPPVDPF 7
+PPV PF
Sbjct: 211 NPPVTPF 217


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PPVDPF 7
PP DPF
Sbjct: 81 PPTDPF 86


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SPPVDPFT 8
SPP+DP T
Sbjct: 37 SPPLDPET 44


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SPPVDPF 7
+PPV+P+
Sbjct: 8 NPPVEPY 14


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 PPVDPFTTL 10
PPV P++ L
Sbjct: 264 PPVKPYSKL 272


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PVDPF 7
PVDPF
Sbjct: 279 PVDPF 283


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 SPPVDPFT 8
+PP+DP T
Sbjct: 26 APPLDPET 33


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 SPPVDPFT 8
+PP+DP T
Sbjct: 26 APPLDPET 33


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 3 PVDPFTTL 10
P DPFT +
Sbjct: 230 PPDPFTQI 237


>sp|NADK_HALMA|NAD kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPPVDPFTTL 10
PP+D FT L
Sbjct: 270 GPPLDFFTAL 279


>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PVDPFT 8
P DPFT
Sbjct: 44 PADPFT 49




312|Sequence|1556|1565|PFTTLASKAS

>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 PFTTLASKAS 10
PF+T+A +AS
Sbjct: 314 PFSTMAGEAS 323


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 PFTTLASKAS 10
PF+TLA + S
Sbjct: 308 PFSTLAGQCS 317


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 PFTTLASKAS 10
PF+TLA + S
Sbjct: 601 PFSTLAGQCS 610


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FTTLASK 8
FTTLASK
Sbjct: 161 FTTLASK 167


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 2 FTTLASK 8
FTTLASK
Sbjct: 161 FTTLASK 167


>sp|GFCR_PICTO|TRANSCRIPTIONAL regulator GfcR|Picrophilus torridus (strain ATCC 700027

Query: 1 PFTTLAS 7
PF TLAS
Sbjct: 100 PFATLAS 106


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PFTTLASK 8
PF TLA K
Sbjct: 326 PFLTLAEK 333




313|Sequence|1561|1573|ASKASPTLDFTER

>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASKASPTLDFTE 12
ASK PT+++ +
Sbjct: 65 ASKVEPTIEYAK 76


>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 3 KASPTLDFT 11
+ SP LDFT
Sbjct: 43 RRSPVLDFT 51


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ASKASPTL 8
ASK SPT+
Sbjct: 251 ASKGSPTI 258


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ASKASPTL 8
ASK SPT+
Sbjct: 251 ASKGSPTI 258


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ASKASPTL 8
ASK SPT+
Sbjct: 251 ASKGSPTI 258


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ASKASPTL 8
ASK SPT+
Sbjct: 252 ASKGSPTI 259


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ASKASPTL 8
ASK SPT+
Sbjct: 252 ASKGSPTI 259






THE END