SQSTM_HUMAN Blast Output
Archaea
1|Sequence|1|10|MASLTVKAYL

>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 3 SLTVKAY 9
S+TVKAY
Sbjct: 55 SITVKAY 61


>sp|Y355_PYRFU|VAPC ribonuclease PF0355|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LTVKAYL 10
LTV+AYL
Sbjct: 46 LTVRAYL 52


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 MASLTVKAY 9
++ LTVKAY
Sbjct: 757 LSLLTVKAY 765




2|Sequence|6|15|VKAYLLGKED

>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKAYLLGKED 10
+K Y++GKED
Sbjct: 197 IKTYVIGKED 206


>sp|Y1261_METTH|UPF0104 membrane protein MTH_1261|Methanothermobacter thermautotrophicus

Query: 1 VKAYLLGK 8
V+AY+LGK
Sbjct: 98 VRAYMLGK 105


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKAYLLGKED 10
+K Y++GK+D
Sbjct: 197 IKTYIIGKKD 206


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VKAYLLGKED 10
+K Y++GK+D
Sbjct: 197 IKTYIVGKKD 206


>sp|Y1775_ARCFU|PUTATIVE aminohydrolase AF_1775|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AYLLGKE 9
AYL+GKE
Sbjct: 270 AYLIGKE 276


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 4 YLLGKE 9
YLLGKE
Sbjct: 160 YLLGKE 165


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YLLGKE 9
YLLGKE
Sbjct: 160 YLLGKE 165


>sp|Y2102_ARCFU|UNCHARACTERIZED protein AF_2102|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 YLLGKE 9
YLLGKE
Sbjct: 17 YLLGKE 22


>sp|Y1031_METJA|UNCHARACTERIZED transporter MJ1031|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VKAYLLGK 8
+ AYLLGK
Sbjct: 79 ILAYLLGK 86


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKAYLLGKED 10
V AY+ GKE+
Sbjct: 486 VNAYIKGKEE 495


>sp|TRM56_METS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanobrevibacter smithii

Query: 2 KAYLLGKED 10
K YL G+ED
Sbjct: 34 KIYLSGEED 42


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKAYLLGK 8
+K YLLGK
Sbjct: 132 MKGYLLGK 139


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 YLLGKED 10
YLL KED
Sbjct: 37 YLLSKED 43


>sp|LYSK_SULTO|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KAYLLGKED 10
K+Y LGK D
Sbjct: 53 KSYFLGKGD 61


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 2 KAYLLGKE 9
K+YL+GK+
Sbjct: 51 KSYLMGKK 58


>sp|T2M3_METJA|TYPE II restriction enzyme MjaIII|Methanocaldococcus jannaschii

Query: 4 YLLGKED 10
YL+GKE+
Sbjct: 42 YLIGKEN 48




3|Sequence|11|20|LGKEDAAREI

>sp|DGGGP_METBU|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LGKEDAAR 8
LGK+DAAR
Sbjct: 254 LGKKDAAR 261


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGKEDAAREI 10
LGKE+ A+E+
Sbjct: 179 LGKEERAKEV 188


>sp|HEM1_HALSA|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 700922

Query: 3 KEDAAREI 10
+EDAARE+
Sbjct: 305 REDAAREV 312


>sp|HEM1_HALS3|GLUTAMYL-TRNA reductase|Halobacterium salinarum (strain ATCC 29341

Query: 3 KEDAAREI 10
+EDAARE+
Sbjct: 305 REDAAREV 312


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGKEDAAREI 10
LG DAARE+
Sbjct: 496 LGLGDAAREL 505


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGKEDAAREI 10
LGK DAA E+
Sbjct: 283 LGKADAAVEL 292


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GKEDAAREI 10
GKE+ AR++
Sbjct: 465 GKEEEARDV 473




4|Sequence|16|25|AAREIRRFSF

>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 3 REIRRF 8
REIRRF
Sbjct: 21 REIRRF 26


>sp|Y541_PYRHO|UNCHARACTERIZED ATP-binding protein PH0541|Pyrococcus horikoshii (strain ATCC

Query: 2 AREIRRF 8
AREIRRF
Sbjct: 257 AREIRRF 263


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AAREIRRF 8
AARE+RR
Sbjct: 48 AARELRRL 55




5|Sequence|21|30|RRFSFCCSPE

>sp|RS4E_THEAC|SMALL ribosomal subunit protein eS4|Thermoplasma acidophilum (strain ATCC

Query: 2 RFSFCCSPE 10
+FSF SPE
Sbjct: 223 KFSFVLSPE 231


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 5 FCCSPE 10
+CC PE
Sbjct: 176 YCCGPE 181


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 1 RRFSFCCSP 9
RRF F SP
Sbjct: 111 RRFLFLASP 119


>sp|Y115_METJA|UNCHARACTERIZED protein MJ0115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRFSFCCSP 9
R +FCC P
Sbjct: 17 RGLAFCCPP 25




6|Sequence|26|35|CCSPEPEAEA

>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 SPEPEAEA 10
SP PEA+A
Sbjct: 129 SPYPEADA 136


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 SPEPEAEA 10
SP PEA+A
Sbjct: 130 SPYPEADA 137


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 SPEPEAEA 10
SP PEA+A
Sbjct: 134 SPYPEADA 141


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SPEPEAE 9
+P+PEAE
Sbjct: 128 TPKPEAE 134


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CCSPEPEAE 9
C SPE AE
Sbjct: 253 CYSPEESAE 261


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 2 CSPEPEA 8
CSP PE
Sbjct: 149 CSPHPEG 155


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PEPEAE 9
PEPEAE
Sbjct: 137 PEPEAE 142


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 1 CCSPE 5
CC PE
Sbjct: 177 CCGPE 181




7|Sequence|31|40|PEAEAEAAAG

>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEAEAEAAA 9
PEA+AE AA
Sbjct: 301 PEADAEKAA 309


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 PEAEAEAAAG 10
P EAE AAG
Sbjct: 171 PRDEAERAAG 180




8|Sequence|36|45|EAAAGPGPCE

>sp|PTH_PYRAB|PEPTIDYL-TRNA hydrolase|Pyrococcus abyssi (strain GE5 /

Query: 3 AAGPGPCE 10
A GPGP E
Sbjct: 99 AIGPGPSE 106


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EAAAGPGPC 9
E A PGPC
Sbjct: 383 EHATAPGPC 391


>sp|PELO_SULTO|PROTEIN pelota homolog|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 AGPGP 8
AGPGP
Sbjct: 193 AGPGP 197


>sp|PELO_SULAC|PROTEIN pelota homolog|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 AGPGP 8
AGPGP
Sbjct: 192 AGPGP 196


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 4 AGPGP 8
AGPGP
Sbjct: 191 AGPGP 195


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 1 EAAAGPGP 8
EAA GP P
Sbjct: 2 EAAMGPSP 9


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 4 AGPGP 8
AGPGP
Sbjct: 227 AGPGP 231


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 1 EAAAGPGPCE 10
EAA G GP +
Sbjct: 408 EAAVGLGPVD 417


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 AAGPGPC 9
A PGPC
Sbjct: 385 ATEPGPC 391


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EAAAGPGP 8
+AAAG GP
Sbjct: 527 KAAAGQGP 534


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 2 AAAGPGP 8
AAAGP P
Sbjct: 75 AAAGPRP 81




9|Sequence|41|50|PGPCERLLSR

>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PGPCERLLS 9
PG CER +
Sbjct: 756 PGTCERFFT 764


>sp|RNZ_SULTO|RIBONUCLEASE Z|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPCERLLS 9
GPCE++++
Sbjct: 202 GPCEKVIN 209


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 293 PGPAKRLI 300


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGPCERLL 8
P PCE L+
Sbjct: 371 PEPCENLI 378


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GPCERLL 8
GPC R+L
Sbjct: 193 GPCPRML 199


>sp|RL3_METBU|LARGE ribosomal subunit protein uL3|Methanococcoides burtonii (strain DSM

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 302 PGPSKRLI 309


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 295 PGPAKRLI 302


>sp|RNZ_IGNH4|RIBONUCLEASE Z|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GPCERLL 8
PCERL+
Sbjct: 209 APCERLV 215


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei (strain

Query: 3 PCERLL 8
PCE+LL
Sbjct: 102 PCEKLL 107


>sp|RL3_METB6|LARGE ribosomal subunit protein uL3|Methanoregula boonei (strain DSM

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 302 PGPAKRLI 309


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 295 PGPVKRLI 302


>sp|RL3_METMA|LARGE ribosomal subunit protein uL3|Methanosarcina mazei (strain ATCC

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 302 PGPSKRLI 309


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 302 PGPVKRLI 309


>sp|RL3_METBF|LARGE ribosomal subunit protein uL3|Methanosarcina barkeri (strain Fusaro

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 302 PGPSKRLI 309


>sp|RL3_METAC|LARGE ribosomal subunit protein uL3|Methanosarcina acetivorans (strain

Query: 1 PGPCERLL 8
PGP +RL+
Sbjct: 302 PGPSKRLI 309


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PCERLLSR 10
PC+ L+SR
Sbjct: 98 PCDVLISR 105


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CERLLSR 10
CERLL++
Sbjct: 422 CERLLTK 428




10|Sequence|46|55|RLLSRVAALF

>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RLLSRVAALF 10
RLLSR A+F
Sbjct: 298 RLLSRGVAVF 307




11|Sequence|51|60|VAALFPALRP

>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 3 ALFPALRP 10
AL+PA+ P
Sbjct: 431 ALYPAIAP 438


>sp|SECY_PYRAB|PROTEIN translocase subunit SecY|Pyrococcus abyssi (strain GE5 /

Query: 1 VAALFPALR 9
++ +FPALR
Sbjct: 455 ISEMFPALR 463


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAALFPALRP 10
V L P+LRP
Sbjct: 16 VCPLMPSLRP 25


>sp|SECY_PYRHO|PROTEIN translocase subunit SecY|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VAALFPALR 9
+ +FPALR
Sbjct: 455 ITEMFPALR 463


>sp|SECY_PYRFU|PROTEIN translocase subunit SecY|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VAALFPALR 9
+ +FPALR
Sbjct: 455 ITEMFPALR 463




12|Sequence|56|65|PALRPGGFQA

>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 2 ALRPGGF 8
AL+PGGF
Sbjct: 183 ALKPGGF 189


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 2 ALRPGGFQA 10
ALR GGF+A
Sbjct: 352 ALRAGGFEA 360


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 312 RPGGFR 317


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 304 RPGGFR 309


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 307 RPGGFR 312


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 323 RPGGFR 328


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 5 PGGFQA 10
PGGFQ+
Sbjct: 573 PGGFQS 578


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 PGGFQA 10
PGGFQ+
Sbjct: 573 PGGFQS 578


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 319 RPGGFR 324


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 2 ALRPGGFQA 10
+L P GFQA
Sbjct: 159 SLDPSGFQA 167


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 319 RPGGFR 324


>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LRPGGF 8
L+PGGF
Sbjct: 466 LKPGGF 471


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 319 RPGGFR 324


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 2 ALRPGGFQA 10
+L P GFQA
Sbjct: 160 SLDPSGFQA 168


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 2 ALRPGGFQA 10
AL+ GGF+A
Sbjct: 352 ALKAGGFEA 360


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 5 PGGFQ 9
PGGFQ
Sbjct: 573 PGGFQ 577


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain AV19

Query: 3 LRPGGF 8
LRPGG+
Sbjct: 171 LRPGGY 176


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ALRPGGFQ 9
AL PGG++
Sbjct: 276 ALLPGGYE 283


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 4 RPGGFQ 9
RPGGF+
Sbjct: 302 RPGGFR 307


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LRPGGFQA 10
L PGGF A
Sbjct: 345 LLPGGFAA 352


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PALRPGGF 8
PA++PG F
Sbjct: 123 PAVKPGDF 130


>sp|SPT5_AERPE|TRANSCRIPTION elongation factor Spt5|Aeropyrum pernix (strain ATCC 700893

Query: 1 PALRPG 6
PAL+PG
Sbjct: 94 PALKPG 99




13|Sequence|61|70|GGFQAHYRDE

>sp|PSA_THEKO|PROTEASOME subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FQAHYRDE 10
F+ HYRD+
Sbjct: 177 FEEHYRDD 184


>sp|PSA_THEK1|PROTEASOME subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 3 FQAHYRDE 10
F+ HYRD+
Sbjct: 177 FEEHYRDD 184


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 3 FQAHYRDE 10
F A YRDE
Sbjct: 266 FSARYRDE 273


>sp|RS4_METAC|SMALL ribosomal subunit protein uS4|Methanosarcina acetivorans (strain

Query: 1 GGFQAHYRDE 10
GG + HYR +
Sbjct: 68 GGLEGHYRTQ 77


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GFQAHYRDE 10
GF+ HY D+
Sbjct: 8 GFRDHYPDD 16


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 FQAHYRDE 10
FQA+ RDE
Sbjct: 72 FQAYVRDE 79


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGFQAHYRDE 10
GG+++ YR E
Sbjct: 372 GGYESLYRPE 381


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFQAHY 7
GF AHY
Sbjct: 291 GFNAHY 296


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGFQAHYR 8
GGF+ H R
Sbjct: 132 GGFEEHKR 139


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 2 GFQAHYRDE 10
GFQA+ R++
Sbjct: 862 GFQAYLREK 870


>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 4 QAHYRD 9
QAHYR+
Sbjct: 420 QAHYRN 425


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GFQAHY 7
GF AHY
Sbjct: 282 GFNAHY 287


>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GFQAHYR 8
GF HYR
Sbjct: 109 GFNIHYR 115


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus (strain

Query: 2 GFQAHYRD 9
GF AH RD
Sbjct: 242 GFDAHRRD 249


>sp|RHAD_THEAC|L-RHAMNOSE 1-dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC

Query: 1 GGFQAHY 7
G FQ HY
Sbjct: 151 GEFQTHY 157


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 GGFQAHYRDE 10
G FQ H DE
Sbjct: 207 GSFQFHVLDE 216


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 2 GFQAHYR 8
GF HYR
Sbjct: 112 GFNIHYR 118




14|Sequence|66|75|HYRDEDGDLV

>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRDEDGDLV 10
YRDED +L+
Sbjct: 446 YRDEDNNLI 454


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 2 YRDEDGDL 9
YRD+D DL
Sbjct: 5 YRDKDADL 12


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 3 RDEDGDL 9
RD DGDL
Sbjct: 137 RDHDGDL 143


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYRDEDGDLV 10
+YRD+DG ++
Sbjct: 227 NYRDKDGKVI 236


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 HYRDEDGDL 9
H+ DE+GD+
Sbjct: 23 HWEDEEGDM 31


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 YRDEDG 7
YRDEDG
Sbjct: 554 YRDEDG 559


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 2 YRDEDGDL 9
YRD D DL
Sbjct: 5 YRDADADL 12


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 3 RDEDGDLV 10
RDE+GD+V
Sbjct: 132 RDEEGDIV 139


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HYRDEDGDLV 10
HYR E+G +V
Sbjct: 344 HYRIENGKVV 353


>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YRDEDGD 8
Y+ EDGD
Sbjct: 14 YKSEDGD 20


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 YRDEDGDLV 10
Y+DEDG +
Sbjct: 546 YKDEDGKTI 554


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YRDEDGDLV 10
+R EDGDL+
Sbjct: 207 FRLEDGDLI 215


>sp|HIS3_METJA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYRDEDGDL 9
HY+ EDG+L
Sbjct: 109 HYKIEDGEL 117


Query: 2 YRDEDGD 8
YRD DGD
Sbjct: 81 YRDCDGD 87


>sp|RNP2_NATPD|RIBONUCLEASE P protein component 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HYRDEDGD 8
H+R EDGD
Sbjct: 58 HFRFEDGD 65


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 YRDEDG 7
Y+DEDG
Sbjct: 560 YKDEDG 565


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 3 RDEDGDLV 10
R+E+GDL+
Sbjct: 321 RNEEGDLI 328


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YRDEDGDLV 10
Y DE+G++V
Sbjct: 60 YYDENGNIV 68


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 2 YRDEDGDLV 10
YRD+DG ++
Sbjct: 140 YRDDDGIVI 148


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 3 RDEDGDLV 10
R EDGD++
Sbjct: 124 RIEDGDII 131


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YRDEDGDLV 10
Y+ ED D++
Sbjct: 257 YKTEDADII 265


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 RDEDGDLV 10
RD DG++V
Sbjct: 169 RDSDGNIV 176


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 1 HYRDEDGDL 9
HY + DGD+
Sbjct: 247 HYVELDGDI 255


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HYRDEDGDLV 10
H+R+ +GD V
Sbjct: 231 HFREVEGDFV 240


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 RDEDGDLV 10
RDE+G+L+
Sbjct: 213 RDENGELL 220


>sp|ENDA_PYRFU|TRNA-SPLICING endonuclease|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DEDGDLV 10
DEDGD+V
Sbjct: 155 DEDGDVV 161


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HYRDEDGDLV 10
H R EDG V
Sbjct: 493 HVRSEDGQTV 502


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HYRDEDGDLV 10
H R EDG V
Sbjct: 493 HVRSEDGQTV 502


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 5 EDGDLV 10
EDGDL+
Sbjct: 492 EDGDLI 497


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 1 HYRDEDGDL 9
HY + DGD+
Sbjct: 247 HYVELDGDI 255


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RDEDGDLV 10
RDE+G+L+
Sbjct: 213 RDENGELL 220


>sp|ENDA_PYRHO|TRNA-SPLICING endonuclease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DEDGDLV 10
DEDGD+V
Sbjct: 155 DEDGDVV 161


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 HYRDED 6
H+RDED
Sbjct: 672 HFRDED 677


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 HYRDEDGDL 9
HY + DGD+
Sbjct: 247 HYVELDGDV 255


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 YRDEDGDLV 10
Y+DE+G V
Sbjct: 548 YKDEEGQTV 556


>sp|Y034_METJA|IRON-SULFUR cluster assembly SufBD family|Methanocaldococcus jannaschii (strain

Query: 1 HYRDEDGDLV 10
HY DGD++
Sbjct: 138 HYHGMDGDIL 147


>sp|COFE_METJA|COENZYME F420:L-glutamate ligase|Methanocaldococcus jannaschii (strain

Query: 1 HYRDEDGDLV 10
Y EDGD++
Sbjct: 32 QYPIEDGDII 41


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HYRDEDGDLV 10
H R EDG V
Sbjct: 549 HVRSEDGQTV 558


>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 2 YRDEDGDLV 10
Y D+DGD V
Sbjct: 189 YYDQDGDAV 197


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 RDEDGDLV 10
+DE+GDL+
Sbjct: 445 QDENGDLL 452


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 1 HYRDEDGDL 9
HY + DGD+
Sbjct: 247 HYVELDGDV 255


>sp|HIS3_METMP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YRDEDGD 8
YRD DGD
Sbjct: 83 YRDCDGD 89




15|Sequence|71|80|DGDLVAFSSD

>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GDLVAFSSD 10
GDL++F+SD
Sbjct: 72 GDLISFTSD 80


>sp|TRIN_SULTO|PUTATIVE Tricorn-like protease N-terminal subunit|Sulfurisphaera tokodaii

Query: 2 GDLVAFSSD 10
G+LVAF+SD
Sbjct: 30 GNLVAFTSD 38


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DGDLVAFSS 9
DGDL+AF S
Sbjct: 333 DGDLIAFVS 341


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 1 DGDLVAFS 8
D DL+AFS
Sbjct: 68 DVDLIAFS 75


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 DGDLVAFS 8
D DLVAFS
Sbjct: 68 DIDLVAFS 75


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGDLVAFSSD 10
D D++A +SD
Sbjct: 246 DSDIIATASD 255


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 2 GDLVAFSSD 10
GD V FS+D
Sbjct: 310 GDYVLFSAD 318


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 DGDLVAFSSD 10
DG LVA + D
Sbjct: 605 DGHLVAITDD 614


>sp|AROE_IGNH4|SHIKIMATE dehydrogenase (NADP(+))|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DGDLVAFSSD 10
DG + AF++D
Sbjct: 90 DGKIYAFNTD 99


>sp|PELO_HALLT|PROTEIN pelota homolog|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GDLVAFSSD 10
GD+V FSS+
Sbjct: 325 GDVVVFSSE 333




16|Sequence|76|85|AFSSDEELTM

>sp|NTPPA_STAMF|DTTP/UTP pyrophosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 4 SDEELTM 10
SDEELT+
Sbjct: 131 SDEELTL 137


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FSSDEELTM 10
FS++E LTM
Sbjct: 117 FSAEENLTM 125


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FSSDEELTM 10
F++DE LT+
Sbjct: 188 FTADERLTL 196


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 5 DEELTM 10
DEELTM
Sbjct: 132 DEELTM 137


>sp|LEUC2_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FSSDEELTM 10
FS DE LT+
Sbjct: 188 FSLDERLTL 196


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 FSSDEELTM 10
FS DE LT+
Sbjct: 188 FSFDERLTL 196


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 2 FSSDEELTM 10
FS DE LT+
Sbjct: 188 FSFDERLTL 196




17|Sequence|81|90|EELTMAMSYV

***** No hits found ******


18|Sequence|86|95|AMSYVKDDIF

>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AMSYVKDD 8
M Y+KDD
Sbjct: 181 GMDYIKDD 188


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MSYVKDDI 9
+SY KDDI
Sbjct: 179 LSYTKDDI 186


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM

Query: 1 AMSYVKDDIF 10
A++Y+ D+IF
Sbjct: 54 ALNYIMDEIF 63


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AMSYVKDDIF 10
A+ +KDD+F
Sbjct: 421 ALVLIKDDLF 430


>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain DSM

Query: 5 VKDDIF 10
VKDDIF
Sbjct: 156 VKDDIF 161


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 AMSYVKDDI 9
A SY+K+D+
Sbjct: 244 AHSYLKEDV 252


>sp|PURO_HALSA|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AMSYVKDD 8
AM Y KDD
Sbjct: 94 AMDYEKDD 101


>sp|PURO_HALS3|IMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AMSYVKDD 8
AM Y KDD
Sbjct: 94 AMDYEKDD 101


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 AMSYVKDDI 9
A SY+K+D+
Sbjct: 244 AHSYLKEDV 252


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 AMSYVKDDI 9
A SY+K+D+
Sbjct: 244 AHSYLKEDV 252


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SYVKDDI 9
+Y+KDDI
Sbjct: 66 NYIKDDI 72




19|Sequence|91|100|KDDIFRIYIK

>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DDIFRIYI 9
DDIF +Y+
Sbjct: 120 DDIFNLYV 127


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DDIFRIYIK 10
DD+ R YIK
Sbjct: 728 DDVSRFYIK 736


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KDDIFRI 7
+DD+FRI
Sbjct: 141 EDDLFRI 147


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 KDDIFRIY 8
+DDIFR +
Sbjct: 23 RDDIFRSF 30


>sp|FLAB1_THEKO|FLAGELLIN B1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KDDIFRIYIK 10
++DIF +Y K
Sbjct: 136 QNDIFDLYFK 145


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KDDIFRI 7
+DD+FRI
Sbjct: 141 EDDLFRI 147


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KDDIFRIYIK 10
+ +IFRIY++
Sbjct: 310 RKEIFRIYLQ 319


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 1 KDDIFRIYIK 10
+DD F IY+K
Sbjct: 55 QDDGFDIYVK 64


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 DIFRIYI 9
D+FR+YI
Sbjct: 670 DLFRLYI 676


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KDDIFRIY 8
K+DI R+Y
Sbjct: 234 KEDILRLY 241


>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 1 KDDIFRIYI 9
KDD+ IYI
Sbjct: 45 KDDLIPIYI 53


>sp|ENDA_PYRIL|TRNA-SPLICING endonuclease|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DDIFRIY 8
DDI++IY
Sbjct: 91 DDIYKIY 97


>sp|ENDA_PYRNV|TRNA-SPLICING endonuclease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DDIFRIY 8
DD+++IY
Sbjct: 91 DDVYKIY 97




20|Sequence|96|105|RIYIKEKKEC

>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IYIKEKKE 9
IYI+EKKE
Sbjct: 958 IYIEEKKE 965


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 IYIKEKKE 9
IYIK+ KE
Sbjct: 19 IYIKDSKE 26


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 RIYIKEKKE 9
IYIK+ KE
Sbjct: 18 HIYIKDSKE 26


>sp|Y538_METJA|UNCHARACTERIZED protein MJ0538|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IYIKEKKEC 10
+Y+KEKK+
Sbjct: 119 VYVKEKKDI 127




21|Sequence|101|110|EKKECRRDHR

>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EKKECRRDHR 10
EKK RR+HR
Sbjct: 250 EKKGTRREHR 259


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ECRRDHR 10
ECRR HR
Sbjct: 52 ECRRGHR 58


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 EKKECRRDHR 10
EKK R++HR
Sbjct: 246 EKKGTRQEHR 255


>sp|BRZ_HALSA|TRANSCRIPTIONAL regulator Brz|Halobacterium salinarum (strain ATCC 700922

Query: 4 ECRRDH 9
ECR DH
Sbjct: 47 ECRNDH 52


>sp|BRZ_HALS3|TRANSCRIPTIONAL regulator Brz|Halobacterium salinarum (strain ATCC 29341

Query: 4 ECRRDH 9
ECR DH
Sbjct: 47 ECRNDH 52




22|Sequence|106|115|RRDHRPPCAQ

>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 3 DHRPP 7
DHRPP
Sbjct: 39 DHRPP 43


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 3 DHRPP 7
DHRPP
Sbjct: 39 DHRPP 43


>sp|RL30_PYRCJ|LARGE ribosomal subunit protein uL30|Pyrobaculum calidifontis (strain DSM

Query: 1 RRDHRPPC 8
R RPPC
Sbjct: 127 REGQRPPC 134


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RDHRPP 7
RD RPP
Sbjct: 397 RDERPP 402


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RDHRPPCA 9
+ RPPC+
Sbjct: 122 KTRRPPCS 129


>sp|RL30_PYRAR|LARGE ribosomal subunit protein uL30|Pyrobaculum arsenaticum (strain DSM

Query: 1 RRDHRPPC 8
R RPPC
Sbjct: 124 REGQRPPC 131


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 4 HRPPC 8
H PPC
Sbjct: 72 HNPPC 76


>sp|RL30_PYRIL|LARGE ribosomal subunit protein uL30|Pyrobaculum islandicum (strain DSM

Query: 1 RRDHRPPC 8
R RPPC
Sbjct: 125 REGQRPPC 132


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 RRDHRPPCAQ 10
R D +PP A+
Sbjct: 287 REDRKPPYAK 296


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 DHRPPCAQ 10
D RP CA+
Sbjct: 76 DGRPDCAE 83


>sp|RS17_METPE|SMALL ribosomal subunit protein uS17|Methanosphaerula palustris (strain

Query: 4 HRPPCAQ 10
H PPC Q
Sbjct: 73 HNPPCLQ 79


>sp|TH11_HALSA|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 RDHRPP 7
RDH PP
Sbjct: 50 RDHEPP 55


>sp|TH11_HALS3|PROBABLE transposase for insertion sequence|Halobacterium salinarum

Query: 2 RDHRPP 7
RDH PP
Sbjct: 50 RDHEPP 55


>sp|RS17_METB6|SMALL ribosomal subunit protein uS17|Methanoregula boonei (strain DSM

Query: 4 HRPPCAQ 10
H PPC Q
Sbjct: 73 HNPPCIQ 79


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 RRDHRPPCAQ 10
++DH P C +
Sbjct: 145 KKDHCPHCGE 154


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 RRDHRPPCAQ 10
++DH P C +
Sbjct: 145 KKDHCPHCGE 154




23|Sequence|111|120|PPCAQEAPRN

>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 2 PCAQEAPRN 10
PCAQE R+
Sbjct: 168 PCAQEIMRD 176


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PCAQEAPRN 10
PCAQE R+
Sbjct: 168 PCAQEIMRD 176


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PCAQEAPRN 10
PCAQE R+
Sbjct: 168 PCAQEIMRD 176


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 2 PCAQEAPR 9
PCAQE+ R
Sbjct: 163 PCAQESVR 170


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 2 PCAQEAPRN 10
PCAQE R+
Sbjct: 166 PCAQEIMRD 174


>sp|MPTA2_METAR|GTP cyclohydrolase MptA 2|Methanocella arvoryzae (strain DSM 22066

Query: 2 PCAQEAPR 9
PCAQE R
Sbjct: 159 PCAQEIMR 166


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 PCAQEAPR 9
PCAQE R
Sbjct: 160 PCAQEIVR 167


>sp|MPTA_ARCFU|GTP cyclohydrolase MptA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PCAQE 6
PCAQE
Sbjct: 156 PCAQE 160


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 PCAQE 6
PCAQE
Sbjct: 160 PCAQE 164


>sp|MPTA_METST|GTP cyclohydrolase MptA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PCAQEA 7
PCAQE+
Sbjct: 164 PCAQES 169


>sp|MPTA_METS3|GTP cyclohydrolase MptA|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PCAQEA 7
PCAQE+
Sbjct: 162 PCAQES 167


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 PPCAQEAPR 9
P CA+E R
Sbjct: 380 PACAEEGQR 388




24|Sequence|116|125|EAPRNMVHPN

>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 EAPRNMVHP 9
+APR+ +HP
Sbjct: 445 KAPRDYIHP 453


>sp|PDXS_HALSA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum (strain

Query: 1 EAPRNMVH 8
EAPR +VH
Sbjct: 198 EAPRELVH 205


>sp|PDXS_HALS3|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halobacterium salinarum (strain

Query: 1 EAPRNMVH 8
EAPR +VH
Sbjct: 198 EAPRELVH 205


>sp|RFCL_METBU|REPLICATION factor C large subunit|Methanococcoides burtonii (strain DSM 6242

Query: 1 EAPRNMVH 8
E P N++H
Sbjct: 258 ETPENLIH 265


>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi (strain

Query: 2 APRNMVH 8
APR++VH
Sbjct: 199 APRDLVH 205


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EAPRNMVHP 9
+AP++ +HP
Sbjct: 446 KAPKDAIHP 454


>sp|UBIX_PYRHO|FLAVIN prenyltransferase UbiX|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EAPRNMVH 8
E P N+VH
Sbjct: 115 ETPLNLVH 122


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAPRNMVHP 9
E PR +HP
Sbjct: 358 ERPRVKIHP 366


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PRNMVHP 9
PRN HP
Sbjct: 219 PRNKQHP 225


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain

Query: 1 EAPRNMVH 8
E P N+VH
Sbjct: 44 ETPANLVH 51


>sp|PDXS_NATPD|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Natronomonas pharaonis (strain

Query: 2 APRNMVH 8
APR +VH
Sbjct: 198 APRELVH 204


>sp|PDXS_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Haloarcula marismortui (strain

Query: 2 APRNMVH 8
APR +VH
Sbjct: 199 APRRLVH 205




25|Sequence|121|130|MVHPNVICDG

>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 31 HPDTICDG 38


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 MVHPNVICDG 10
M HP+ ICDG
Sbjct: 27 MGHPDSICDG 36


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 29 HPDSICDG 36


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 31 HPDSICDG 38


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 31 HPDSICDG 38


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 HPNVICDG 10
HP+ ICDG
Sbjct: 31 HPDSICDG 38


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HPNVICDG 10
HP+ +CDG
Sbjct: 31 HPDSLCDG 38


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VHPNVICDG 10
VHP +I DG
Sbjct: 115 VHPTIIIDG 123


>sp|Y3537_METJA|UNCHARACTERIZED protein MJECL37|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MVHPNVICDG 10
MV PNVI D
Sbjct: 90 MVEPNVISDA 99


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPNVICDG 10
HP+ ICD
Sbjct: 30 HPDTICDA 37


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VHPNVICDG 10
VHPNV+ G
Sbjct: 666 VHPNVVFRG 674


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 MVHPNVICDG 10
M HP+VI +G
Sbjct: 324 MQHPSVITEG 333


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 1 MVHPNVICD 9
+ H NV+CD
Sbjct: 90 LTHANVLCD 98


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 3 HPNVICDG 10
HP+V+ DG
Sbjct: 331 HPSVLTDG 338


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MVHPNVICDG 10
M HPNV+ G
Sbjct: 1 MSHPNVLLLG 10


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 MVHPNVICDG 10
M HPNV+ G
Sbjct: 1 MSHPNVLLLG 10


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 3 HPNVICDG 10
HP+V C G
Sbjct: 89 HPHVDCSG 96


>sp|METK_PYRNV|S-ADENOSYLMETHIONINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 27 HPDYIADG 34


>sp|METK_PYRIL|S-ADENOSYLMETHIONINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 27 HPDYIADG 34


>sp|METK_PYRCJ|S-ADENOSYLMETHIONINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 27 HPDYIADG 34


>sp|METK_PYRAE|S-ADENOSYLMETHIONINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 27 HPDYIADG 34


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PNVICD 9
PN +CD
Sbjct: 150 PNAVCD 155


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 30 HPDSIADG 37


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 30 HPDSIADG 37


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 30 HPDSIADG 37


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 3 HPNVICDG 10
H NVI DG
Sbjct: 64 HGNVIVDG 71


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 33 HPDSIADG 40


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 30 HPDSIADG 37


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 4 PNVICDG 10
PNV+ DG
Sbjct: 245 PNVLADG 251


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 33 HPDSIADG 40


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 33 HPDSIADG 40


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 MVHPNV 6
M+HPN+
Sbjct: 166 MIHPNM 171


>sp|Y709_METMP|PROBABLE minor pilin MMP0709|Methanococcus maripaludis (strain DSM 14266

Query: 2 VHPNVI 7
VHPN+I
Sbjct: 104 VHPNLI 109


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 MVHPNVICDG 10
++H N+ DG
Sbjct: 8 LIHANIAADG 17


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MVHPNVIC 8
+V+PN IC
Sbjct: 1365 LVNPNDIC 1372


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain

Query: 3 HPNVICDG 10
HP+V C G
Sbjct: 89 HPHVDCRG 96


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 HPNVICDG 10
HP+ I DG
Sbjct: 30 HPDSIADG 37


>sp|NAH2_METJA|PROBABLE Na(+)/H(+) antiporter 2|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MVHPNVI 7
M HPN++
Sbjct: 365 MKHPNIV 371


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 MVHPNVICDG 10
+VHP V+ G
Sbjct: 247 VVHPGVVASG 256


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MVHPNVICDG 10
M HP+VI G
Sbjct: 325 MQHPSVITAG 334


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 MVHPNVICDG 10
M HP+VI G
Sbjct: 324 MQHPSVITAG 333


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 MVHPNVICDG 10
M HP+VI G
Sbjct: 324 MQHPSVITAG 333


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MVHPNVICDG 10
M HP+VI G
Sbjct: 324 MQHPSVITAG 333


>sp|CSG_HALJT|CELL surface glycoprotein|Haloarcula japonica (strain ATCC 49778

Query: 3 HPNVICDG 10
HPN DG
Sbjct: 209 HPNPAADG 216


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 MVHPNVICDG 10
+VHP V+ G
Sbjct: 247 VVHPGVVATG 256




26|Sequence|126|135|VICDGCNGPV

>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 ICDGCNG 8
IC+GCNG
Sbjct: 146 ICEGCNG 152


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 4 DGCNGP 9
+GCNGP
Sbjct: 68 EGCNGP 73


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 3 CDGCNGPV 10
C+GC+G V
Sbjct: 354 CEGCDGDV 361


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CDGCNGP 9
C CNGP
Sbjct: 178 CTTCNGP 184


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 VICDGCNGP 9
VIC CN P
Sbjct: 100 VICHECNRP 108


>sp|IF2B_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain ATCC

Query: 1 VICDGCNGP 9
VIC CN P
Sbjct: 100 VICHECNRP 108


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 ICDGCNG 8
ICD C G
Sbjct: 50 ICDNCGG 56


>sp|IF2B_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 VICDGCNGP 9
V+C CN P
Sbjct: 102 VLCRECNSP 110


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VICDGCNGP 9
++C CN P
Sbjct: 142 MVCPNCNSP 150


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ICDGCNGPV 10
I DGC+G +
Sbjct: 355 ILDGCDGEI 363


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VICDGCNGP 9
+I +G NGP
Sbjct: 310 IISEGANGP 318


>sp|RIFK_METLZ|RIBOFLAVIN kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 GCNGPV 10
GC GPV
Sbjct: 20 GCKGPV 25


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 ICDGCNG 8
IC+GC G
Sbjct: 151 ICEGCIG 157


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ICDGCNGP 9
+C CN P
Sbjct: 143 VCPNCNSP 150


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 242 IFCSGCN 248


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 31 LCDACTG 37


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VICDGCNGPV 10
+I +G NGP+
Sbjct: 317 LIVEGANGPL 326


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VICDGCNGPV 10
+I +G NGP+
Sbjct: 314 LIVEGANGPL 323


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ICDGCNGP 9
+C CN P
Sbjct: 169 VCPACNKP 176


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 148 VCDACGG 154


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 148 VCDACGG 154


>sp|HDRB1_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 ICDGCNG 8
IC+GC G
Sbjct: 77 ICNGCYG 83


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 2 ICDGCN 7
IC GCN
Sbjct: 392 ICPGCN 397


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 VICDGCNGP 9
V+C CN P
Sbjct: 107 VMCHECNRP 115


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 VICDGCNGPV 10
++ G NGPV
Sbjct: 272 IVTGGLNGPV 281


>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 2 ICDGCNG 8
IC+GC G
Sbjct: 82 ICNGCYG 88


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 1 VICDGCNGP 9
++ +G NGP
Sbjct: 324 IVVEGANGP 332


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 1 VICDGCNGP 9
++ +G NGP
Sbjct: 324 IVVEGANGP 332


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 1 VICDGCNGPV 10
+I G NGP+
Sbjct: 270 IIIGGLNGPI 279


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 3 CDGCNGPV 10
CD C G V
Sbjct: 73 CDACGGKV 80


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 3 CDGCNGPV 10
CD C G V
Sbjct: 73 CDACGGKV 80


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 ICDGCNGP 9
+C CN P
Sbjct: 58 VCPNCNKP 65


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 VICDGCNGPV 10
V CD GP+
Sbjct: 367 VPCDSIEGPI 376


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 45 VCDYCDG 51


>sp|MOAA_SULTO|PROBABLE GTP 3',8-cyclase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 242 IFCAGCN 248


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 243 IFCAGCN 249


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VICDGCN 7
+ C GCN
Sbjct: 244 IFCAGCN 250


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 2 ICDGCNGPV 10
IC C PV
Sbjct: 144 ICPDCGSPV 152


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 48 VCDYCSG 54


>sp|SPSS_METMP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 48 VCDYCSG 54


>sp|SPSS_METM7|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C7 /

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 48 VCDYCSG 54


>sp|SPSS_METM6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C6 /

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 48 VCDYCSG 54


>sp|SPSS_METM5|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus maripaludis (strain C5 /

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 48 VCDYCSG 54


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DGCNGPV 10
+G NGPV
Sbjct: 90 EGVNGPV 96


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ICDGCNG 8
+CD C+G
Sbjct: 44 VCDYCHG 50


>sp|RIFK_METMJ|RIBOFLAVIN kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 GCNGPV 10
GC GP+
Sbjct: 18 GCRGPI 23


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 ICDGCNGPV 10
+ +G NGPV
Sbjct: 198 VIEGLNGPV 206


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 1 VICDGCNGPV 10
+ C GC GP+
Sbjct: 258 IRCAGCGGPI 267


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ICDGC 6
IC+GC
Sbjct: 157 ICEGC 161


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 CDGCNG 8
CD C G
Sbjct: 124 CDACGG 129


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM 21154

Query: 3 CDGCNG 8
CD C G
Sbjct: 124 CDACGG 129


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 1 VICDGCNGPV 10
++ G NGPV
Sbjct: 267 IVAMGLNGPV 276


>sp|KAD_METAR|ADENYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 149 LCDSCGG 155


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila

Query: 2 ICDGCNG 8
ICD C G
Sbjct: 28 ICDSCFG 34


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 3 CDGCNG 8
CD C+G
Sbjct: 158 CDDCDG 163


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 16 VCDACLG 22


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 VICDGCNGP 9
++C+ C GP
Sbjct: 353 LVCNPCCGP 361


>sp|HDRB2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B2|Methanococcus

Query: 2 ICDGCNG 8
+C+GC G
Sbjct: 77 VCNGCYG 83


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VICDGC 6
V+C GC
Sbjct: 60 VLCSGC 65


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VICDGCNGP 9
++ +G NGP
Sbjct: 316 LVVEGANGP 324


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VICDGCNGP 9
++ +G NGP
Sbjct: 319 LVVEGANGP 327


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 1 VICDGCNGP 9
++ +G NGP
Sbjct: 330 LVVEGANGP 338


>sp|Y231_METTH|UNCHARACTERIZED methyltransferase MTH_231|Methanothermobacter thermautotrophicus

Query: 2 ICDGCN 7
+ DGCN
Sbjct: 169 VADGCN 174


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 3 CDGCNGPV 10
CD C+G V
Sbjct: 73 CDCCSGKV 80


Query: 3 CDGCNGP 9
C+ CN P
Sbjct: 58 CESCNEP 64


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 50 VCDFCEG 56


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 46 VCDFCEG 52


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 51 VCDYCGG 57


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 49 VCDYCGG 55


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 50 VCDFCGG 56


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 50 VCDFCGG 56


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ICDGCNG 8
+CD C G
Sbjct: 50 VCDFCGG 56


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 ICDGCNG 8
+C+GC G
Sbjct: 77 VCNGCYG 83


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 1 VICDGCNGPV 10
++C C+G V
Sbjct: 60 LVCKSCSGRV 69


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 1 VICDGCNG 8
++ D CNG
Sbjct: 28 IVGDACNG 35


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 3 CDGC 6
CDGC
Sbjct: 89 CDGC 92


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 VICDGCNGPV 10
V C GC GP
Sbjct: 234 VPCTGCYGPT 243


>sp|MVHG_METFE|F420-NON-REDUCING hydrogenase subunit G|Methanothermus fervidus

Query: 3 CDGCNGP 9
C GC GP
Sbjct: 59 CQGCYGP 65


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VICDGC 6
V+CD C
Sbjct: 138 VVCDDC 143




27|Sequence|131|140|CNGPVVGTRY

>sp|PDXT_HALMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Haloarcula marismortui (strain

Query: 2 NGPVVGTRY 10
+GPVVGT +
Sbjct: 168 DGPVVGTSF 176


>sp|RL21_HALWD|LARGE ribosomal subunit protein eL21|Haloquadratum walsbyi (strain DSM

Query: 2 NGPVVGTR 9
NGP+ GTR
Sbjct: 5 NGPMTGTR 12


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGPVVGTRY 10
N P++GT Y
Sbjct: 98 NAPIIGTPY 106


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 3 GPVVGTRY 10
GP VGT+Y
Sbjct: 87 GPDVGTQY 94


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPVVGTR 9
GPV GTR
Sbjct: 210 GPVYGTR 216


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PVVGTRY 10
P+VG+RY
Sbjct: 274 PLVGSRY 280


>sp|RL21_HALMA|LARGE ribosomal subunit protein eL21|Haloarcula marismortui (strain

Query: 2 NGPVVGTR 9
NGP+ GTR
Sbjct: 5 NGPLEGTR 12


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 NGPVVGT 8
NGP VGT
Sbjct: 53 NGPQVGT 59


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NGPVVGT 8
NGP VGT
Sbjct: 53 NGPQVGT 59


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CNGPVVGT 8
C+G +VGT
Sbjct: 217 CDGVIVGT 224


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 4 PVVGTRY 10
P+VG RY
Sbjct: 187 PIVGLRY 193


>sp|RNH2_NATPD|RIBONUCLEASE HII|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GPVVGTRY 10
GPVVG+ +
Sbjct: 13 GPVVGSMF 20


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 5 VVGTRY 10
+VGTRY
Sbjct: 189 IVGTRY 194


>sp|GGR_HALVD|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Haloferax volcanii (strain ATCC 29605

Query: 3 GPVVGTRY 10
G +VG RY
Sbjct: 126 GEIVGVRY 133


>sp|MSRA_METMJ|PEPTIDE methionine sulfoxide reductase MsrA|Methanoculleus marisnigri

Query: 2 NGPVVGTRY 10
GP +GT+Y
Sbjct: 91 QGPDIGTQY 99


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 CNGPVVG 7
C GPV+G
Sbjct: 265 CFGPVMG 271




28|Sequence|136|145|VGTRYKCSVC

>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 RYKCSVC 10
RY+CS C
Sbjct: 205 RYRCSYC 211


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 5 YKCSVC 10
YKC VC
Sbjct: 327 YKCPVC 332


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GTRYKCSVC 10
G YKC +C
Sbjct: 32 GEVYKCPIC 40


>sp|FWDB_METJA|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanocaldococcus

Query: 1 VGTRYKCSV 9
VGTR+ C +
Sbjct: 30 VGTRHACRI 38


>sp|RUBR_METTH|PROBABLE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 RYKCSVC 10
RYKC VC
Sbjct: 13 RYKCRVC 19


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 YKCSVC 10
YKC +C
Sbjct: 459 YKCPIC 464


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 5 YKCSVC 10
Y+CS+C
Sbjct: 158 YQCSLC 163


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 3 TRYKCSVC 10
TR+ C VC
Sbjct: 217 TRWPCRVC 224


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 6 KCSVC 10
KCSVC
Sbjct: 329 KCSVC 333


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 6 KCSVC 10
KCSVC
Sbjct: 329 KCSVC 333


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 2 GTRYKCSVC 10
GT Y C C
Sbjct: 290 GTEYTCPGC 298


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 RYKCSVC 10
R KC VC
Sbjct: 17 RKKCKVC 23


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 RYKCSVC 10
R KC VC
Sbjct: 17 RKKCKVC 23


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GTRYKCSVC 10
G Y+C +C
Sbjct: 32 GEVYRCPIC 40


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 VGTRYK 6
VGTRYK
Sbjct: 42 VGTRYK 47


>sp|Y1658_METJA|UNCHARACTERIZED protein MJ1658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGTRYKCSVC 10
+G R C++C
Sbjct: 92 IGVREFCNIC 101


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 VGTRYK 6
VGTRYK
Sbjct: 42 VGTRYK 47


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 VGTRYK 6
VGTRYK
Sbjct: 42 VGTRYK 47


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 YKCSVC 10
Y+C VC
Sbjct: 5 YRCRVC 10


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YKCSVC 10
Y+C +C
Sbjct: 193 YRCEIC 198


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GTRYKCSVC 10
G Y+C +C
Sbjct: 32 GEVYRCPIC 40


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 KCSVC 10
KCS+C
Sbjct: 172 KCSIC 176


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 6 KCSVC 10
KCS+C
Sbjct: 172 KCSIC 176


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 6 KCSVC 10
KCS+C
Sbjct: 170 KCSIC 174


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 2 GTRYKCSVC 10
G Y+CS C
Sbjct: 239 GYYYECSKC 247


>sp|RUBR1_METJA|PROBABLE Rubredoxin-1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RYKCSVC 10
+YKC VC
Sbjct: 21 KYKCKVC 27


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GTRYKCSVC 10
G Y+C +C
Sbjct: 32 GEIYRCPIC 40


>sp|RL37A_METJA|LARGE ribosomal subunit protein eL43|Methanocaldococcus jannaschii

Query: 4 RYKCSVC 10
+YKC VC
Sbjct: 36 KYKCPVC 42


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 1 VGTRYK 6
+GTRYK
Sbjct: 42 IGTRYK 47


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain

Query: 6 KCSVC 10
KCS+C
Sbjct: 44 KCSIC 48


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 5 YKCSVC 10
YKC VC
Sbjct: 5 YKCPVC 10




29|Sequence|141|150|KCSVCPDYDL

>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 2 CSVCPDY 8
CSVC DY
Sbjct: 278 CSVCTDY 284


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 SVCPDYDL 10
S+CPD+D+
Sbjct: 87 SMCPDFDV 94


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CSVCPDY 8
CSVC DY
Sbjct: 408 CSVCGDY 414


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 CSVCPDY 8
CSVC DY
Sbjct: 408 CSVCGDY 414


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 CSVCPDY 8
CSVC DY
Sbjct: 408 CSVCGDY 414


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KCSVCPDY 8
KC + PDY
Sbjct: 289 KCPIAPDY 296


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 CSVCPDY 8
CSVC DY
Sbjct: 408 CSVCGDY 414


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CSVCPDY 8
CSVC DY
Sbjct: 408 CSVCGDY 414


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVCPDYD 9
++CP+YD
Sbjct: 271 TICPNYD 277


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CSVCPDY 8
CS+C DY
Sbjct: 408 CSICGDY 414


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KCSVCPDYD 9
KC VC ++D
Sbjct: 274 KCPVCSNHD 282


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KCSVCPDY 8
+CSVC Y
Sbjct: 17 QCSVCSSY 24


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 KCSVCPDY 8
+C V PDY
Sbjct: 505 RCEVGPDY 512


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SVCPDYD 9
+VCPD D
Sbjct: 342 AVCPDLD 348


>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SVCPDYDL 10
++CPD DL
Sbjct: 78 ALCPDVDL 85


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii (strain

Query: 2 CSVCPDY 8
C VC DY
Sbjct: 198 CHVCTDY 204


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 2 CSVCPDY 8
C +C DY
Sbjct: 192 CKICKDY 198


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 4 VCPDYD 9
VCPD D
Sbjct: 44 VCPDLD 49


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CSVCPDY 8
CSVC +Y
Sbjct: 408 CSVCGEY 414


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 VCPDYD 9
VCPD D
Sbjct: 44 VCPDLD 49


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 VCPDYD 9
VCPD D
Sbjct: 44 VCPDLD 49


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 SVCPDYD 9
SVCP Y+
Sbjct: 453 SVCPPYN 459


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KCSVCPDYDL 10
+C VC +DL
Sbjct: 438 ECPVCHSHDL 447


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain Fusaro

Query: 2 CSVCPDY 8
C VC DY
Sbjct: 197 CHVCLDY 203


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 2 CSVCPDY 8
C +C DY
Sbjct: 191 CHICTDY 197


>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 VCPDYD 9
VCPD D
Sbjct: 44 VCPDVD 49


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 CSVCPDY 8
C++C DY
Sbjct: 406 CTMCGDY 412


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 CSVCPDY 8
C++C DY
Sbjct: 406 CTMCGDY 412


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CSVCPDY 8
C++C DY
Sbjct: 406 CTMCGDY 412


>sp|Y048_ARCFU|UNCHARACTERIZED protein AF_0048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 PDYDL 10
PDYDL
Sbjct: 132 PDYDL 136


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 KCSVC 5
KCSVC
Sbjct: 329 KCSVC 333


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 KCSVC 5
KCSVC
Sbjct: 329 KCSVC 333


>sp|SPCS_METJA|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VCPDYDL 10
+C DYD+
Sbjct: 235 ICQDYDI 241


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VCPDYD 9
+CPD D
Sbjct: 340 ICPDLD 345


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 4 VCPDYDL 10
V PDYD+
Sbjct: 452 VYPDYDM 458


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SVCPDYDL 10
SVC +YD+
Sbjct: 184 SVCHEYDV 191


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 SVCPDYDL 10
SVC +YD+
Sbjct: 184 SVCHEYDV 191


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 SVCPDYDL 10
SVC +YD+
Sbjct: 184 SVCHEYDV 191


>sp|COFD_ARCFU|2-PHOSPHO-L-LACTATE transferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VCPDYD 9
+CPD D
Sbjct: 40 ICPDID 45


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 248 IAPDYDV 254


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 248 IAPDYDV 254


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 248 IAPDYDV 254


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 248 IAPDYDV 254


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 248 IAPDYDV 254


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 248 IAPDYDV 254


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 251 IAPDYDV 257


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 VCPDYDL 10
+ PDYD+
Sbjct: 249 IAPDYDV 255


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 1 KCSVCPD 7
KC VC D
Sbjct: 328 KCPVCND 334


>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 VCPDYD 9
+CPD D
Sbjct: 43 ICPDLD 48


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCSVCP 6
KC++CP
Sbjct: 96 KCNLCP 101


>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KCSVCP 6
KCS+CP
Sbjct: 210 KCSLCP 215


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 1 KCSVCPD 7
KC VC D
Sbjct: 287 KCMVCGD 293


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CSVCPDY 8
CS+C D+
Sbjct: 408 CSMCGDF 414


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 KCSVCP 6
KC CP
Sbjct: 7 KCDTCP 12




30|Sequence|146|155|PDYDLCSVCE

>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PDYDLCSVC 9
P YD C VC
Sbjct: 460 PVYDTCGVC 468


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DYDLCSVCE 10
DYD+CS+ E
Sbjct: 1126 DYDICSLFE 1134


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 DYDLCSVCE 10
DYD+CS+ E
Sbjct: 1119 DYDICSLFE 1127


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 YDLCSVCE 10
YD+CSV E
Sbjct: 62 YDICSVSE 69


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PDYDLCSVCE 10
P+ +LC +C+
Sbjct: 71 PNGNLCDICK 80


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YDLCSVCE 10
YDLC V E
Sbjct: 30 YDLCKVGE 37


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 3 YDLCSVC 9
YD+C C
Sbjct: 451 YDICQAC 457


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 1 PDYDLC 6
P YDLC
Sbjct: 278 PPYDLC 283


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 3 YDLCSVC 9
YD+C+ C
Sbjct: 388 YDICASC 394


>sp|SURE_METS3|5'-NUCLEOTIDASE SurE|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 DLCSVC 9
DLC VC
Sbjct: 25 DLCEVC 30


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 36 PNTNICPVC 44


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 36 PNTNICPVC 44


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 36 PNTNICPVC 44


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 36 PNTNICPVC 44


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 36 PNTNICPVC 44


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 30 PNTNICPVC 38


>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DYDLCSVCE 10
DY L S+C+
Sbjct: 25 DYTLASLCD 33


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYDLCSVCE 10
DY+LC + E
Sbjct: 111 DYELCVINE 119


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 DYDLCSVC 9
DY +CS C
Sbjct: 99 DYVICSEC 106


>sp|IF2B_METLZ|TRANSLATION initiation factor 2 subunit|Methanocorpusculum labreanum (strain

Query: 2 DYDLCSVC 9
DY +CS C
Sbjct: 99 DYVICSEC 106


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM 21154

Query: 2 DYDLCSVC 9
DY +CS C
Sbjct: 99 DYVICSEC 106


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 1 PDYDLCSVC 9
P+ ++C VC
Sbjct: 36 PNTNICPVC 44


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 DYDLCSVC 9
D+DLC+ C
Sbjct: 244 DWDLCTGC 251


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 3 YDLCSVC 9
YDLC C
Sbjct: 18 YDLCDHC 24


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 6 CSVCE 10
CS+CE
Sbjct: 105 CSICE 109


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YDLCSV 8
YDLC V
Sbjct: 25 YDLCKV 30


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 3 YDLCSV 8
YDLC V
Sbjct: 25 YDLCKV 30


>sp|RL24E_THEON|LARGE ribosomal subunit protein eL24|Thermococcus onnurineus (strain

Query: 1 PDYDLCSVC 9
P +++CS C
Sbjct: 2 PRWNVCSYC 10


>sp|DEOC_NATPD|DEOXYRIBOSE-PHOSPHATE aldolase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PDYDLCSVC 9
PD L SVC
Sbjct: 53 PDVTLVSVC 61


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 PDYDLCSVC 9
P+ +LC VC
Sbjct: 176 PETNLCEVC 184


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DLCSVC 9
D CSVC
Sbjct: 406 DACSVC 411


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DYDLCSVC 9
D ++CS+C
Sbjct: 404 DEEMCSMC 411


>sp|RL34_THEPD|LARGE ribosomal subunit protein eL34|Thermofilum pendens (strain DSM

Query: 2 DYDLCSVC 9
DY C++C
Sbjct: 33 DYPKCAIC 40


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YDLCSVC 9
Y +C +C
Sbjct: 42 YSMCDIC 48


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDYDLCSVC 9
P D C VC
Sbjct: 435 PPVDKCPVC 443


>sp|THIC2_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DYDLCSVC 9
D ++CS+C
Sbjct: 404 DSEMCSMC 411




31|Sequence|151|160|CSVCEGKGLH

>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 1 CSVCEGKGLH 10
C VC+G G H
Sbjct: 19 CPVCDGAGTH 28


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CSVCEGKGL 9
C VCEG G
Sbjct: 21 CPVCEGTGF 29


Query: 1 CSVCEGKG 8
C +C+G G
Sbjct: 5 CPICDGTG 12


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 1 CSVCEGKG 8
CS C GKG
Sbjct: 186 CSTCRGKG 193


Query: 1 CSVCEGKG 8
C VC G G
Sbjct: 200 CPVCSGTG 207


>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CSVCEGKGL 9
C CEG+G+
Sbjct: 90 CECCEGRGV 98


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 CSVCEG 6
CS+CEG
Sbjct: 105 CSICEG 110


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CSVCEGKG 8
CS C+G+G
Sbjct: 171 CSACDGRG 178


Query: 1 CSVCEGKG 8
CS C G G
Sbjct: 211 CSTCRGDG 218


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 1 CSVCEGKG 8
C VC GKG
Sbjct: 9 CPVCGGKG 16


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CSVCEGKGL 9
CS C GKG+
Sbjct: 205 CSNCNGKGV 213


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 CSVCEGKG 8
CS C G+G
Sbjct: 187 CSACHGRG 194


Query: 1 CSVCEGKG 8
CS C G G
Sbjct: 144 CSTCSGTG 151


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CSVCEGKG 8
CS C G+G
Sbjct: 187 CSACHGRG 194


Query: 1 CSVCEGKG 8
CS C G G
Sbjct: 144 CSTCSGTG 151


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CSVCEGKG 8
CS C G+G
Sbjct: 187 CSTCHGRG 194


Query: 1 CSVCEGKG 8
CS C G G
Sbjct: 144 CSTCSGTG 151


Query: 1 CSVCEGKG 8
C VC G G
Sbjct: 201 CPVCGGAG 208


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 1 CSVCEGKGL 9
CS C G G+
Sbjct: 215 CSTCRGNGV 223


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 CSVCEGKG 8
C+VC G G
Sbjct: 201 CTVCHGTG 208


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CSVCEGKGL 9
CS C G G+
Sbjct: 218 CSTCNGDGV 226


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 2 SVCEGKGLH 10
S CEG LH
Sbjct: 83 SYCEGDDLH 91


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CSVCEGKG 8
CS C G+G
Sbjct: 177 CSQCNGRG 184


Query: 1 CSVCEGKG 8
C CEG G
Sbjct: 203 CPRCEGSG 210


Query: 1 CSVCEGKG 8
C C+G G
Sbjct: 160 CDTCDGAG 167


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 1 CSVCEGKG 8
C +C GKG
Sbjct: 33 CPICGGKG 40


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 CSVCEGKG 8
CS C G+G
Sbjct: 222 CSTCGGQG 229


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 CSVCEGKG 8
CS C G+G
Sbjct: 222 CSTCGGQG 229


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 1 CSVCEGKG 8
C VC G+G
Sbjct: 221 CRVCGGRG 228


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CSVCEGKG 8
C VC GK
Sbjct: 174 CKVCGGKA 181


>sp|RL24E_METVS|LARGE ribosomal subunit protein eL24|Methanococcus vannielii (strain

Query: 1 CSVCEGK 7
CS CEGK
Sbjct: 6 CSFCEGK 12


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 1 CSVCEGKGL 9
C VC G+ L
Sbjct: 111 CEVCLGQAL 119


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 CSVCEGK 7
C VC G+
Sbjct: 771 CEVCRGR 777


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CSVCEGK 7
C VC+G+
Sbjct: 132 CPVCQGE 138


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 1 CSVCEGKG 8
CS C G G
Sbjct: 217 CSECRGSG 224


Query: 1 CSVCEGKG 8
CS C G G
Sbjct: 177 CSECNGSG 184


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CSVCEGK 7
C VC GK
Sbjct: 1137 CPVCGGK 1143


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 CSVCEGK 7
C VC GK
Sbjct: 1324 CPVCGGK 1330


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SVCEGKGLH 10
++CE G+H
Sbjct: 166 NICEKYGIH 174


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SVCEGK 7
SVC+GK
Sbjct: 63 SVCDGK 68


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 2 SVCEGKG 8
+VCE KG
Sbjct: 165 NVCESKG 171


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 2 SVCEGKG 8
+VCE KG
Sbjct: 165 NVCESKG 171


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 CSVCEGKG 8
C VC G+G
Sbjct: 82 CEVCGGEG 89


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CSVCEGK 7
C +C GK
Sbjct: 149 CDICGGK 155


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VCEGKGL 9
VC GKG+
Sbjct: 135 VCGGKGI 141


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain

Query: 1 CSVCEGKG 8
C VC G+G
Sbjct: 82 CDVCGGEG 89


>sp|NIFD_METTL|NITROGENASE molybdenum-iron protein alpha chain|Methanothermococcus

Query: 1 CSVCEGKGLH 10
C V + KG H
Sbjct: 167 CGVSQSKGHH 176


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VCEGKGL 9
VCEGK L
Sbjct: 217 VCEGKYL 223




32|Sequence|156|165|GKGLHRGHTK

>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GKGLHRG 7
GKGL RG
Sbjct: 325 GKGLERG 331


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 48 LHAGHTR 54


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 47 LHAGHTR 53


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 47 LHAGHTR 53


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 47 LHAGHTR 53


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 47 LHAGHTR 53


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 44 LHAGHTR 50


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 GKGLHR 6
GKG+HR
Sbjct: 456 GKGVHR 461


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 5 HRGHT 9
HRGHT
Sbjct: 310 HRGHT 314


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GKGLHR 6
G+GLHR
Sbjct: 7 GEGLHR 12


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LHRGHTK 10
LH GH K
Sbjct: 17 LHSGHVK 23


>sp|CCA_THEAC|CCA-ADDING enzyme|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KGLHRGH 8
+GLH GH
Sbjct: 80 EGLHIGH 86


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KGLHRGHTK 10
K LH GH +
Sbjct: 132 KPLHMGHAR 140


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KGLHRGHTK 10
K LH GH +
Sbjct: 132 KPLHMGHAR 140


>sp|PYRH_THESM|URIDYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|PYRH_PYRHO|URIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 108 LHIGHTR 114


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 2 KGLHRGH 8
+GLH GH
Sbjct: 80 EGLHIGH 86


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 1 GKGLHRGHT 9
GKG+ +G T
Sbjct: 235 GKGIPKGET 243


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LHRGHTK 10
LH GHT+
Sbjct: 108 LHIGHTR 114


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 KGLHRGHTK 10
K LH GH +
Sbjct: 138 KPLHMGHAR 146


>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 GLHRGHT 9
G H GHT
Sbjct: 113 GTHPGHT 119


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KGLHRGHTK 10
K LH GH +
Sbjct: 132 KPLHMGHAR 140


>sp|AROC_THEAC|CHORISMATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GLHRGHT 9
GLH G+T
Sbjct: 68 GLHEGYT 74


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KGLHRGHTK 10
K LH GH +
Sbjct: 137 KPLHMGHAR 145




33|Sequence|161|170|RGHTKLAFPS

>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 1 RGHTKLAF 8
R HTK+AF
Sbjct: 203 RKHTKMAF 210


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GHTKLAF 8
GHT LAF
Sbjct: 260 GHTTLAF 266


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RGHTKLAFPS 10
RG KL +P+
Sbjct: 318 RGRAKLKYPA 327


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RGHTKL 6
RGHT+L
Sbjct: 74 RGHTRL 79


>sp|RL3_SULTO|LARGE ribosomal subunit protein uL3|Sulfurisphaera tokodaii (strain

Query: 2 GHTKLAFP 9
GH KLA P
Sbjct: 2 GHRKLASP 9




34|Sequence|166|175|LAFPSPFGHL

>sp|PSTB_THEKO|PHOSPHATE import ATP-binding protein PstB|Thermococcus kodakarensis (strain

Query: 3 FPSPFGHL 10
+P+PF HL
Sbjct: 93 YPNPFPHL 100


>sp|PSTB_PYRFU|PHOSPHATE import ATP-binding protein PstB|Pyrococcus furiosus (strain ATCC

Query: 3 FPSPFGHL 10
+P+PF HL
Sbjct: 93 YPNPFPHL 100


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 3 FPSPFGHL 10
+P+PF HL
Sbjct: 94 YPNPFPHL 101


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 3 FPSPFGH 9
FP P GH
Sbjct: 226 FPKPVGH 232


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PSPFGH 9
PSPF H
Sbjct: 823 PSPFAH 828


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 3 FPSPFGH 9
FP P GH
Sbjct: 226 FPKPVGH 232


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 3 FPSPFGH 9
FP P GH
Sbjct: 226 FPKPVGH 232


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 3 FPSPFGH 9
FP P GH
Sbjct: 226 FPKPVGH 232


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PSPFGH 9
PSPF H
Sbjct: 825 PSPFSH 830


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 AFPSPFGHL 10
AFP+ F HL
Sbjct: 413 AFPAYFDHL 421


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 2 AFPSPFGHL 10
AFP+ F HL
Sbjct: 413 AFPAYFDHL 421


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 2 AFPSPFGHL 10
+FP+P G++
Sbjct: 132 SFPTPLGNV 140


>sp|PSTB_SACS2|PHOSPHATE import ATP-binding protein PstB|Saccharolobus solfataricus (strain

Query: 4 PSPFGHL 10
P+PF HL
Sbjct: 99 PNPFPHL 105


>sp|RL2_SACI1|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 3 FPSPFGHL 10
+P+ FGHL
Sbjct: 30 YPNIFGHL 37


>sp|RL2_SACI7|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 3 FPSPFGHL 10
+P+ FGHL
Sbjct: 30 YPNIFGHL 37


>sp|RL2_SACI6|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 3 FPSPFGHL 10
+P+ FGHL
Sbjct: 30 YPNIFGHL 37


>sp|RL2_SACI4|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 3 FPSPFGHL 10
+P+ FGHL
Sbjct: 30 YPNIFGHL 37


>sp|RL2_SACI3|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 3 FPSPFGHL 10
+P+ FGHL
Sbjct: 30 YPNIFGHL 37


>sp|RL2_SACI2|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 3 FPSPFGHL 10
+P+ FGHL
Sbjct: 30 YPNIFGHL 37


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FPSPFGHL 10
PSP+G L
Sbjct: 41 LPSPYGDL 48


>sp|MFNA_META3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus aeolicus

Query: 4 PSPFGHL 10
P+PFG++
Sbjct: 76 PNPFGYI 82


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AMPGPFG 235


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 234 AIPGPFG 240


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AIPGPFG 235


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AIPGPFG 235


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 225 AIPGPFG 231


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AIPGPFG 235


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AIPGPFG 235


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AIPGPFG 235


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 233 AIPGPFG 239


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 225 AIPGPFG 231


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 225 AIPGPFG 231


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 234 AIPGPFG 240


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 226 AIPGPFG 232


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 225 AIPGPFG 231


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 233 AIPGPFG 239


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 234 AIPGPFG 240


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 235 AIPGPFG 241


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 232 AIPGPFG 238


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 232 AIPGPFG 238


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 235 AIPGPFG 241


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 228 AIPGPFG 234


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 225 AIPGPFG 231


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SPFGH 9
SPFGH
Sbjct: 267 SPFGH 271


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 230 AIPGPFG 236


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 231 AIPGPFG 237


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 229 AIPGPFG 235


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 238 AIPGPFG 244


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 AFPSPFG 8
A P PFG
Sbjct: 233 AIPGPFG 239


>sp|COBS_METMA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LAFPSPFGHL 10
LAF S FG L
Sbjct: 6 LAFKSGFGFL 15


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LAFPSPFGHL 10
LAF S FG L
Sbjct: 6 LAFKSGFGFL 15


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LAFPSPFGHL 10
LAF S FG L
Sbjct: 6 LAFKSGFGFL 15




35|Sequence|171|180|PFGHLSEGFS

>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 PFGHLSEGFS 10
PFG +SEG S
Sbjct: 526 PFGKVSEGLS 535


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 1 PFGHLSEGFS 10
P GH +EG S
Sbjct: 97 PAGHFAEGSS 106


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 PFGHLSEGF 9
P HL++GF
Sbjct: 370 PHKHLTQGF 378


>sp|RS4E_PICTO|SMALL ribosomal subunit protein eS4|Picrophilus torridus (strain ATCC

Query: 4 HLSEGFS 10
H++EGFS
Sbjct: 204 HMNEGFS 210


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii (strain

Query: 2 FGHLSEGFS 10
FG L EGF+
Sbjct: 252 FGKLYEGFN 260


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 2 FGHLSEG 8
FGH+ EG
Sbjct: 318 FGHVGEG 324


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFGHLSEGFS 10
PFG + GFS
Sbjct: 14 PFGDIVFGFS 23


>sp|IF2A_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 FGHLSEGF 9
FG L EGF
Sbjct: 133 FGDLYEGF 140


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 2 FGHLSEGF 9
+G+L EGF
Sbjct: 236 YGYLKEGF 243


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FGHLSEGF 9
F HL EGF
Sbjct: 368 FDHLVEGF 375


>sp|RL2_METMA|LARGE ribosomal subunit protein uL2|Methanosarcina mazei (strain ATCC

Query: 1 PFGHLSEGF 9
P G++ EGF
Sbjct: 96 PIGNVPEGF 104


>sp|RL2_METAC|LARGE ribosomal subunit protein uL2|Methanosarcina acetivorans (strain

Query: 1 PFGHLSEGF 9
P G++ EGF
Sbjct: 96 PIGNVPEGF 104


>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 3 GHLSEGF 9
GHLS+G
Sbjct: 3 GHLSDGL 9


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 2 FGHLSE 7
FGHLS+
Sbjct: 297 FGHLSD 302


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 2 FGHLSE 7
FGHLS+
Sbjct: 297 FGHLSD 302


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HLSEGFS 10
H+S GFS
Sbjct: 157 HISSGFS 163


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFGHLSEG 8
P GH++ G
Sbjct: 309 PIGHITSG 316




36|Sequence|176|185|SEGFSHSRWL

>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain

Query: 2 EGFSHSRW 9
+GF+ SRW
Sbjct: 12 DGFNKSRW 19


>sp|GLMS_METMP|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanococcus maripaludis (strain

Query: 3 GFSHSRW 9
G HSRW
Sbjct: 67 GIGHSRW 73


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 2 EGFSHSRWL 10
+GF S WL
Sbjct: 214 QGFEESAWL 222


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 FSHSRWL 10
++HS WL
Sbjct: 345 YTHSSWL 351


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GFSHSRWL 10
GF SRW+
Sbjct: 478 GFGLSRWV 485


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 75 FSHIKWI 81


>sp|G1PDH_METPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaerula palustris (strain ATCC

Query: 1 SEGFSHSRWL 10
+ GF S+W+
Sbjct: 11 TPGFDKSKWM 20


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FSHSRWL 10
++HS WL
Sbjct: 345 YTHSAWL 351


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 FSHSRWL 10
++HS WL
Sbjct: 345 YTHSAWL 351


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 74 FSHIKWI 80


>sp|TDXH_THEKO|PEROXIREDOXIN kodakarensis (strain ATCC BAA-918

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHIKWM 82


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 74 FSHIKWI 80


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 4 FSHSRWL 10
FSH WL
Sbjct: 74 FSHIAWL 80


>sp|TDXH_METJA|PEROXIREDOXIN jannaschii (strain ATCC 43067

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHLKWV 82


>sp|TDXH_PYRHO|PEROXIREDOXIN horikoshii (strain ATCC 700860

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHIKWI 82


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 78 FSHIKWI 84


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHLKWM 82


>sp|TDXH_METM5|PEROXIREDOXIN maripaludis (strain C5 /

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHIKWV 82


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHIKWV 82


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 76 FSHIKWV 82


>sp|TDXH_NANEQ|PEROXIREDOXIN equitans (strain Kin4-M)

Query: 4 FSHSRWL 10
FSH +W+
Sbjct: 74 FSHIKWI 80




37|Sequence|181|190|HSRWLRKVKH

>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 1 HSRWLRKVK 9
HSR L KVK
Sbjct: 547 HSRLLEKVK 555


>sp|KTHY1_SACS2|PROBABLE thymidylate kinase 1|Saccharolobus solfataricus (strain ATCC

Query: 1 HSRWLRKVK 9
H WL K+K
Sbjct: 71 HVNWLSKIK 79


>sp|HIS5_SULAC|IMIDAZOLE glycerol phosphate synthase subunit|Sulfolobus acidocaldarius

Query: 3 RWLRK 7
RWLRK
Sbjct: 195 RWLRK 199


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 HSRWLRKVKH 10
H RW R H
Sbjct: 190 HKRWWRVYNH 199


>sp|Y513_ARCFU|UNCHARACTERIZED protein AF_0513|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HSRWLRKVK 9
H R++RK++
Sbjct: 110 HDRFIRKIE 118


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 HSRWLRKVKH 10
+SRWL K H
Sbjct: 64 YSRWLGKWHH 73




38|Sequence|186|195|RKVKHGHFGW

>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 VKHGHFG 9
+ HGHFG
Sbjct: 58 LDHGHFG 64


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 KVKHGHFGW 10
+V H FGW
Sbjct: 105 EVSHSPFGW 113


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 HGHFGW 10
HG +GW
Sbjct: 105 HGDYGW 110


>sp|RPIA_THEAC|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RKVKHGHFG 9
RK++ HFG
Sbjct: 123 RKIEAAHFG 131


>sp|ADHS_METVS|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|GPMA_METAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 3 VKHGHFGW 10
V+HG GW
Sbjct: 7 VRHGESGW 14


>sp|ADHS_METM7|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|Y1659_ARCFU|UNCHARACTERIZED protein AF_1659|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVKHGHFGW 10
K+ H HF W
Sbjct: 138 KLHHLHFKW 146


>sp|ADHS_METM6|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|ADHS_METM5|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|ADHS_METMP|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 1 RKVKHGHFGW 10
RK KH GW
Sbjct: 223 RKGKHARQGW 232


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VKHGHFGW 10
V+HGH G+
Sbjct: 69 VRHGHRGY 76


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 5 HGHFGW 10
+GH GW
Sbjct: 11 YGHLGW 16


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RKVKHGHFG 9
RK+K G FG
Sbjct: 12 RKMKFGEFG 20


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 KHGHFG 9
KHG+FG
Sbjct: 102 KHGNFG 107


>sp|RL3_HALSA|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 RKVKHGHFGW 10
RK KH GW
Sbjct: 221 RKGKHARQGW 230


>sp|RL3_HALS3|LARGE ribosomal subunit protein uL3|Halobacterium salinarum (strain ATCC

Query: 1 RKVKHGHFGW 10
RK KH GW
Sbjct: 221 RKGKHARQGW 230


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 6 GHFGW 10
GH GW
Sbjct: 205 GHLGW 209


>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 1 RKVKHGHFGW 10
RK KH GW
Sbjct: 224 RKGKHARQGW 233


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 VKHGHFG 9
VKHGH
Sbjct: 192 VKHGHLA 198


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VKHGHFG 9
+KHG FG
Sbjct: 432 LKHGRFG 438


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VKHGHFG 9
+KHG FG
Sbjct: 432 LKHGRFG 438


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RKVKHGH 7
R ++HGH
Sbjct: 289 RAIRHGH 295


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 3 VKHGHF 8
V HGHF
Sbjct: 40 VTHGHF 45


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 GHFGW 10
GH GW
Sbjct: 10 GHLGW 14


>sp|Y1106_METJA|UNCHARACTERIZED protein MJ1106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KHGHFGW 10
+H HFG+
Sbjct: 169 RHWHFGY 175


>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 VKHGHFGW 10
VKH F W
Sbjct: 246 VKHDRFVW 253


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain

Query: 3 VKHGH 7
+KHGH
Sbjct: 76 IKHGH 80


>sp|Y2048_ARCFU|UNCHARACTERIZED protein AF_2048|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KVKHGHF 8
++KHG+F
Sbjct: 137 EIKHGNF 143


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 KVKHGHFGW 10
+VK H GW
Sbjct: 330 RVKCNHCGW 338




39|Sequence|191|200|GHFGWPGWEM

>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GHFGWP 6
GH GWP
Sbjct: 10 GHLGWP 15


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 5 WPGW 8
WPGW
Sbjct: 246 WPGW 249


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 2 HFGWP 6
H+GWP
Sbjct: 336 HYGWP 340


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HFGWP 6
H+GWP
Sbjct: 333 HYGWP 337


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 HFGWP 6
H+GWP
Sbjct: 333 HYGWP 337


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 GHFGWPGWEM 10
G FG+P EM
Sbjct: 65 GQFGFPDLEM 74


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GHFGWPGWE 9
G FG+PG E
Sbjct: 211 GVFGYPGLE 219


>sp|PIMT_METMJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GHFGWPG 7
G FGW G
Sbjct: 210 GQFGWQG 216


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GHFGWP 6
H+GWP
Sbjct: 466 AHWGWP 471


>sp|F16PA_HALSA|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GHFGWPGWE 9
G FG+PG E
Sbjct: 211 GVFGYPGME 219


>sp|F16PA_HALS3|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 GHFGWPGWE 9
G FG+PG E
Sbjct: 211 GVFGYPGME 219


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 1 GHFGWPG 7
GH GW G
Sbjct: 205 GHLGWLG 211


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HFGW 5
HFGW
Sbjct: 310 HFGW 313


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HFGW 5
HFGW
Sbjct: 74 HFGW 77


>sp|AATC_THEKO|A-TYPE ATP synthase subunit C|Thermococcus kodakarensis (strain ATCC

Query: 3 FGWPGWE 9
F W GW+
Sbjct: 17 FTWVGWK 23


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 1 GHFGW 5
GH GW
Sbjct: 12 GHLGW 16


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GHFGW 5
G+FGW
Sbjct: 413 GYFGW 417


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 HFGW 5
HFGW
Sbjct: 316 HFGW 319


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FGWPGWEM 10
GW WE+
Sbjct: 110 LGWSFWEI 117


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 1 GHFGWP 6
G+F WP
Sbjct: 532 GYFEWP 537


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 1 GHFGWP 6
G+F WP
Sbjct: 632 GYFEWP 637


>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM

Query: 3 FGWPGWE 9
F W GW+
Sbjct: 18 FTWLGWK 24


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HFGW 5
HFGW
Sbjct: 73 HFGW 76


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 WPGWE 9
W GWE
Sbjct: 112 WYGWE 116


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 5 WPGWE 9
W GWE
Sbjct: 112 WYGWE 116


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HFGW 5
HFGW
Sbjct: 324 HFGW 327


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HFGW 5
HFGW
Sbjct: 324 HFGW 327


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 4 GWPGWE 9
+PGWE
Sbjct: 358 AFPGWE 363


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GHFGWPG 7
G+F W G
Sbjct: 453 GYFSWTG 459


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HFGW 5
HFGW
Sbjct: 324 HFGW 327


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HFGW 5
HFGW
Sbjct: 324 HFGW 327


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HFGW 5
HFGW
Sbjct: 324 HFGW 327


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 1 GHFGWPG 7
GH GW G
Sbjct: 207 GHEGWLG 213


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 1 GHFGWPG 7
H+G+PG
Sbjct: 272 AHYGYPG 278


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GHFGWPGW 8
G F WPG+
Sbjct: 493 GTFIWPGF 500




40|Sequence|196|205|PGWEMGPPGN

>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PGWEMGPPGN 10
P W MG P N
Sbjct: 297 PFWVMGDPNN 306


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PGWEMGP 7
P WE GP
Sbjct: 201 PPWEAGP 207


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis

Query: 4 EMGPP 8
EMGPP
Sbjct: 37 EMGPP 41


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 2 GWEMGPPG 9
GWE+ P G
Sbjct: 388 GWELYPEG 395


>sp|BACS1_HALSS|SENSORY rhodopsin-1|Halobacterium sp. (strain SG1)

Query: 3 WEMGPPG 9
W MGP G
Sbjct: 179 WLMGPAG 185


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GWEMGPP 8
GW M PP
Sbjct: 121 GWYMYPP 127


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGWEMGPPG 9
PGW + P G
Sbjct: 141 PGWYIPPVG 149


>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 2 GWEMGPPG 9
GW+ G P
Sbjct: 120 GWDAGSPA 127


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GWEMGPP 8
G +MGPP
Sbjct: 270 GIDMGPP 276


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GWEMGPPG 9
GW G PG
Sbjct: 83 GWLYGAPG 90


>sp|AMT1_ARCFU|AMMONIUM transporter Amt1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GWEMGPPGN 10
GW G PG+
Sbjct: 238 GWIKGKPGS 246


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GWEMGPP 8
G +MGPP
Sbjct: 270 GIDMGPP 276


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GWEMGPP 8
G +MGPP
Sbjct: 270 GIDMGPP 276


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGWEMGPPG 9
PGW + P G
Sbjct: 148 PGWYIPPVG 156


>sp|BACS_HALSD|SENSORY rhodopsin|Halorubrum sodomense

Query: 3 WEMGPPG 9
W MGP G
Sbjct: 179 WLMGPAG 185


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GWEMGPP 8
G +MGPP
Sbjct: 270 GIDMGPP 276


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 GWEMGPPGN 10
GWE G P +
Sbjct: 1020 GWEGGEPNS 1028




41|Sequence|201|210|GPPGNWSPRP

>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 PPGNWSPRP 10
PP +SPRP
Sbjct: 119 PPSCFSPRP 127


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PPGNWSP 8
P GNW+P
Sbjct: 138 PQGNWAP 144


>sp|RSMA_METMP|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain DSM

Query: 2 PPGNWSPRP 10
PP +SP+P
Sbjct: 162 PPSAFSPKP 170


>sp|RSMA_METM7|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C7 /

Query: 2 PPGNWSPRP 10
PP +SP+P
Sbjct: 162 PPSAFSPKP 170


>sp|RSMA_METM6|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C6 /

Query: 2 PPGNWSPRP 10
PP +SP+P
Sbjct: 162 PPSAFSPKP 170


>sp|RSMA_METM5|PROBABLE ribosomal RNA small subunit|Methanococcus maripaludis (strain C5 /

Query: 2 PPGNWSPRP 10
PP +SP+P
Sbjct: 162 PPSAFSPKP 170


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 4 GNWSPRP 10
GNW P P
Sbjct: 161 GNWDPSP 167


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 GPPGNWSPR 9
G PG WS R
Sbjct: 168 GLPGGWSKR 176


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 GPPGNW 6
G PGNW
Sbjct: 151 GKPGNW 156


>sp|RSMA_METVS|PROBABLE ribosomal RNA small subunit|Methanococcus vannielii (strain ATCC

Query: 2 PPGNWSPRP 10
PP +SP+P
Sbjct: 162 PPTAFSPKP 170


>sp|DPHB_PYRHO|DIPHTHINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPGNWSP 8
P GNW P
Sbjct: 139 PEGNWFP 145


>sp|DPHB_PYRFU|DIPHTHINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPGNWSP 8
P GNW P
Sbjct: 139 PEGNWFP 145


>sp|EPDB_METMP|MINOR structural pilin EpdB|Methanococcus maripaludis (strain DSM 14266

Query: 2 PPGNWS 7
PP NW+
Sbjct: 75 PPANWT 80


>sp|RSMA_METHJ|PROBABLE ribosomal RNA small subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 PPGNWSPRP 10
PPG +SP P
Sbjct: 160 PPGAFSPPP 168


>sp|RFCL_HALMA|REPLICATION factor C large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 GPPGNWS 7
GPP WS
Sbjct: 326 GPPSYWS 332


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 3 PGNWSPRP 10
P NW+P P
Sbjct: 69 PTNWNPAP 76


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 169 PVNWCPR 175


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGNWSPRP 10
PG W P P
Sbjct: 196 PGGWMPEP 203


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PGNWSP 8
PG+WSP
Sbjct: 41 PGSWSP 46


>sp|Y83A_METJA|PROBABLE pilin MJ0832.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPGNW 6
PPG W
Sbjct: 79 PPGTW 83


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 169 PVNWCPR 175


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPPGNW 6
G PGNW
Sbjct: 236 GHPGNW 241


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 2 PPGNW 6
PPG W
Sbjct: 89 PPGTW 93


>sp|RS6E_PYRIL|SMALL ribosomal subunit protein eS6|Pyrobaculum islandicum (strain DSM

Query: 1 GPPGNWSPR 9
GPPG W P+
Sbjct: 84 GPPGYWPPK 92


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPGNW 6
PPG+W
Sbjct: 276 PPGDW 280


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPGNWSPRP 10
PP N P P
Sbjct: 87 PPNNRDPTP 95


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PGNWS 7
PGNW+
Sbjct: 87 PGNWT 91


>sp|RL37A_NANEQ|LARGE ribosomal subunit protein eL43|Nanoarchaeum equitans (strain

Query: 1 GPPGNWSPR 9
GP G + PR
Sbjct: 10 GPTGRFGPR 18


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 2 PPGNWSPR 9
PPG W R
Sbjct: 448 PPGVWRMR 455


>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 4 GNWSPRP 10
G W+P+P
Sbjct: 257 GLWTPKP 263


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 GPPGNW 6
G PG+W
Sbjct: 153 GKPGSW 158


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 173 PVNWCPR 179


>sp|RNH2_METKA|RIBONUCLEASE HII|Methanopyrus kandleri (strain AV19 /

Query: 3 PGNWSP 8
PGN+SP
Sbjct: 101 PGNYSP 106


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 172 PVNWCPR 178


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 171 PVNWCPR 177


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 171 PVNWCPR 177


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 187 PVNWCPR 193


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 173 PVNWCPR 179


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 171 PVNWCPR 177


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 173 PVNWCPR 179


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PGNWSPR 9
P NW PR
Sbjct: 170 PVNWCPR 176


>sp|RS6E_PYRAE|SMALL ribosomal subunit protein eS6|Pyrobaculum aerophilum (strain ATCC

Query: 1 GPPGNWSP 8
GPPG W P
Sbjct: 84 GPPGYWPP 91


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 3 PGNWSP 8
P NW P
Sbjct: 173 PANWQP 178


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PGNW 6
PGNW
Sbjct: 353 PGNW 356


>sp|TDXH2_SULME|PEROXIREDOXIN 2|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 3 PGNWSP 8
P NW P
Sbjct: 166 PANWEP 171


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 NWSPRP 10
NWSP P
Sbjct: 528 NWSPPP 533


>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 4 GNWSPR 9
G+W+PR
Sbjct: 525 GDWTPR 530


>sp|TRPC_AERPE|INDOLE-3-GLYCEROL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 GNWSPRP 10
GN SP+P
Sbjct: 25 GNCSPKP 31


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 PGNWSP 8
PG W P
Sbjct: 120 PGRWEP 125


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 GPPGNWSPR 9
GP W PR
Sbjct: 543 GPDVYWDPR 551


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GPPGNW 6
G PG+W
Sbjct: 101 GKPGDW 106


>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GPPGNW 6
G PG+W
Sbjct: 101 GKPGDW 106


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GPPGNWS 7
G PG WS
Sbjct: 32 GEPGGWS 38


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGNWSP 8
PP W P
Sbjct: 515 PPSKWQP 521




42|Sequence|206|215|WSPRPPRAGE

>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 1 WSPRPP 6
W P+PP
Sbjct: 65 WDPKPP 70


>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PRPPRAGE 10
PR PR G+
Sbjct: 33 PRSPRGGK 40


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WSPRPPR 7
W+P PP+
Sbjct: 530 WTPPPPK 536


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPRPPRAGE 10
+PRPP+A E
Sbjct: 153 APRPPKAVE 161


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 WSPRPPR 7
WSP PR
Sbjct: 528 WSPPEPR 534


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WSPRPPRAGE 10
WSP PR E
Sbjct: 166 WSPFNPRCNE 175


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WSPRPPRAGE 10
WSP PR E
Sbjct: 162 WSPFNPRCNE 171


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 1 WSPRPPRAGE 10
W+ RPP A +
Sbjct: 154 WASRPPTADD 163


>sp|COSB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 WSPRPPR 7
WS PP+
Sbjct: 114 WSSHPPK 120


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SPRPPRA 8
+PRPP A
Sbjct: 452 APRPPNA 458




43|Sequence|211|220|PRAGEARPGP

>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 5 EARPGP 10
EARPGP
Sbjct: 332 EARPGP 337


>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PRAGEARP 8
PR G+A+P
Sbjct: 36 PRGGKAKP 43


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 5 EARPGP 10
EARPGP
Sbjct: 345 EARPGP 350


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 5 EARPGP 10
EARPGP
Sbjct: 348 EARPGP 353


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 5 EARPGP 10
EARPGP
Sbjct: 349 EARPGP 354


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 PRAGEARPG 9
PRA + +PG
Sbjct: 146 PRAKKGKPG 154


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 5 EARPGP 10
EARPGP
Sbjct: 347 EARPGP 352


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PRAGEARPGP 10
PR +PGP
Sbjct: 248 PRVNILKPGP 257


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PRAGEARP 8
P +GE RP
Sbjct: 316 PESGEMRP 323


>sp|DPHB_METM6|DIPHTHINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 RAGEARPG 9
RAG +PG
Sbjct: 206 RAGSTKPG 213


>sp|DPHB_METM5|DIPHTHINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 RAGEARPG 9
RAG +PG
Sbjct: 206 RAGSTKPG 213


>sp|PRIS_THEVO|DNA primase small subunit PriS|Thermoplasma volcanium (strain ATCC

Query: 2 RAGEARPG 9
+ GE RPG
Sbjct: 189 KTGEKRPG 196


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PRAGEARP 8
P +GE RP
Sbjct: 317 PESGEMRP 324


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain

Query: 4 GEARPGP 10
GEA PGP
Sbjct: 12 GEANPGP 18


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 1 PRAGEARP 8
P+AG ARP
Sbjct: 96 PQAGNARP 103


>sp|THI4_METMJ|THIAMINE thiazole synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 AGEARPGP 10
AGE R GP
Sbjct: 225 AGECRMGP 232




44|Sequence|216|225|ARPGPTAESA

>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 ARPGPTAE 8
A PGPT E
Sbjct: 227 AGPGPTKE 234


>sp|RRP41_METMA|EXOSOME complex component Rrp41|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ARPGPTAES 9
ARPGP+ S
Sbjct: 90 ARPGPSRRS 98


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 1 ARPGPTAES 9
A GPTAES
Sbjct: 150 ALVGPTAES 158




45|Sequence|221|230|TAESASGPSE

***** No hits found ******


46|Sequence|226|235|SGPSEDPSVN

>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 1 SGPSEDPS 8
SGPS DPS
Sbjct: 243 SGPSLDPS 250


>sp|Y452_METAC|UNCHARACTERIZED glycosyltransferase MA_0452|Methanosarcina acetivorans (strain ATCC

Query: 1 SGPSEDPS 8
SGPS DPS
Sbjct: 243 SGPSLDPS 250


>sp|UREG_SULTO|UREASE accessory protein UreG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 EDPSVN 10
EDPSVN
Sbjct: 80 EDPSVN 85


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SGPSEDPSVN 10
+G EDPS+N
Sbjct: 77 TGIREDPSMN 86


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 1 SGPSEDPSVN 10
+G EDPS+N
Sbjct: 79 TGIREDPSMN 88


>sp|UREG_NATPD|UREASE accessory protein UreG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SGPSEDPSVN 10
+G EDPS+N
Sbjct: 77 TGIREDPSMN 86


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 3 PSEDPSVN 10
P+EDP V+
Sbjct: 97 PNEDPDVD 104


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain ATCC

Query: 4 SEDPSV 9
SEDPSV
Sbjct: 116 SEDPSV 121


>sp|SYW_METTH|TRYPTOPHAN--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GPSEDPSV 9
GP +DP +
Sbjct: 210 GPDQDPHI 217


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GPSEDP 7
GP EDP
Sbjct: 120 GPPEDP 125


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii

Query: 2 GPSEDPSVN 10
GPSE +VN
Sbjct: 66 GPSEGETVN 74


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 3 PSEDPSV 9
PSE+P+V
Sbjct: 364 PSEEPTV 370




47|Sequence|231|240|DPSVNFLKNV

>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 2 PSVNFLKNV 10
PS+++LKNV
Sbjct: 127 PSIDYLKNV 135


>sp|RL15E_METS5|LARGE ribosomal subunit protein eL15|Metallosphaera sedula (strain ATCC

Query: 1 DPSVNFLKN 9
DP N+LKN
Sbjct: 143 DPQFNWLKN 151


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DPSVNFL 7
DPS++FL
Sbjct: 51 DPSIDFL 57


>sp|SUI1_CENSY|PROTEIN translation factor SUI1 homolog|Cenarchaeum symbiosum (strain A)

Query: 1 DPSVNFLKNV 10
DP +N L+NV
Sbjct: 47 DPKLNNLENV 56


>sp|PYRH_THEKO|URIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DPSVNFLKNV 10
DP ++F+K +
Sbjct: 16 DPDIDFIKAI 25


>sp|PYRH_THEGJ|URIDYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DPSVNFLKNV 10
DP V F+K +
Sbjct: 16 DPDVEFIKAI 25


>sp|PYRH_THEON|URIDYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 DPSVNFLKNV 10
DP ++F+K +
Sbjct: 16 DPDIDFIKAI 25


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 DPSVNFLKNV 10
DP+++ ++NV
Sbjct: 211 DPTIDVIENV 220


>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 DPSVNFLKNV 10
D +NF++NV
Sbjct: 242 DVGINFVRNV 251


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 PSVNFLKNV 10
PSV + KN+
Sbjct: 513 PSVEYFKNL 521


>sp|Y1526_METAR|PUTATIVE HTH-type transcriptional regulatory protein|Methanocella arvoryzae

Query: 1 DPSVNFLKN 9
DPS N L+N
Sbjct: 200 DPSPNDLRN 208


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 DPSVNFLKNV 10
DPS N+L ++
Sbjct: 122 DPSNNYLMSI 131


>sp|PELO_SULTO|PROTEIN pelota homolog|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 NFLKNV 10
NFLKN+
Sbjct: 204 NFLKNI 209




48|Sequence|236|245|FLKNVGESVA

>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 FLKNVGESV 9
FLK VGE V
Sbjct: 194 FLKEVGEKV 202


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FLKNVGESVA 10
+KN+GE VA
Sbjct: 96 LIKNLGEDVA 105


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KNVGESV 9
KNVGES+
Sbjct: 402 KNVGESI 408


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FLKNVGE 7
F KNVGE
Sbjct: 400 FFKNVGE 406


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FLKNVGESV 9
F++N+GE V
Sbjct: 60 FVRNIGEGV 68


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FLKNVG 6
FLKNVG
Sbjct: 233 FLKNVG 238


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 FLKNVGESVA 10
FL+++G+SV+
Sbjct: 335 FLRSLGDSVS 344


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FLKNVGESVA 10
FL+ VGE++A
Sbjct: 124 FLQPVGEAIA 133


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLKNVGESVA 10
+LKN+GE +
Sbjct: 218 YLKNLGERMG 227


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FLKNVGESVA 10
FL+++G+SV+
Sbjct: 338 FLRSLGDSVS 347


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 FLKNVGESVA 10
F+K+VG +VA
Sbjct: 87 FMKHVGLNVA 96


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter

Query: 1 FLKNVGESVA 10
F+K+VG +VA
Sbjct: 87 FMKHVGLNVA 96


>sp|CARB1_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 FLKNVGESV 9
F+K +GE V
Sbjct: 133 FMKKIGEPV 141


>sp|RNH2_SULTO|RIBONUCLEASE HII|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FLKNVG 6
FLKN+G
Sbjct: 32 FLKNIG 37




49|Sequence|241|250|GESVAAALSP

>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 1 GESVAAALS 9
GESV ALS
Sbjct: 346 GESVPVALS 354


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GESVAAAL 8
G+S+AAAL
Sbjct: 398 GKSIAAAL 405


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 GESVAAALS 9
GE +A ALS
Sbjct: 918 GEQIAVALS 926


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 GESVAAALSP 10
G +VAA LSP
Sbjct: 172 GANVAAMLSP 181




50|Sequence|246|255|AALSPLGIEV

>sp|Y1295_ARCFU|UNCHARACTERIZED protein AF_1295|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LSPLGIEV 10
LSPLG EV
Sbjct: 38 LSPLGFEV 45


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AALSPLGIEV 10
AALSP+ +EV
Sbjct: 409 AALSPVPVEV 418


>sp|PELO_THEPD|PROTEIN pelota homolog|Thermofilum pendens (strain DSM 2475

Query: 3 LSPLGIEV 10
LSP+G+EV
Sbjct: 149 LSPVGVEV 156


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 ALSPLGIEV 10
A +PLGIE+
Sbjct: 41 ARTPLGIEM 49


>sp|RL11_METLZ|LARGE ribosomal subunit protein uL11|Methanocorpusculum labreanum

Query: 2 ALSPLGIEV 10
AL PLGI V
Sbjct: 23 ALGPLGINV 31


>sp|RL11_METMJ|LARGE ribosomal subunit protein uL11|Methanoculleus marisnigri (strain

Query: 2 ALSPLGIEV 10
AL PLGI V
Sbjct: 23 ALGPLGINV 31


>sp|RL11_METB6|LARGE ribosomal subunit protein uL11|Methanoregula boonei (strain DSM

Query: 2 ALSPLGIEV 10
AL PLGI V
Sbjct: 23 ALGPLGINV 31


>sp|RL11_METHJ|LARGE ribosomal subunit protein uL11|Methanospirillum hungatei JF-1

Query: 2 ALSPLGIEV 10
AL PLGI V
Sbjct: 23 ALGPLGINV 31


>sp|RL11_METPE|LARGE ribosomal subunit protein uL11|Methanosphaerula palustris (strain

Query: 2 ALSPLGIEV 10
AL PLGI V
Sbjct: 23 ALGPLGINV 31


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ALSPLGIEV 10
ALS LG+EV
Sbjct: 98 ALSKLGVEV 106


>sp|RL11_METAR|LARGE ribosomal subunit protein uL11|Methanocella arvoryzae (strain DSM

Query: 2 ALSPLGIEV 10
AL PLGI +
Sbjct: 23 ALGPLGINI 31


>sp|RL11_METTP|LARGE ribosomal subunit protein uL11|Methanothrix thermoacetophila

Query: 2 ALSPLGIEV 10
AL PLG+ V
Sbjct: 23 ALGPLGVNV 31


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AALSPLGIEV 10
AAL LGI+V
Sbjct: 15 AALEKLGIKV 24


>sp|SRP54_THEKO|SIGNAL recognition particle 54 kDa|Thermococcus kodakarensis (strain ATCC

Query: 3 LSPLGIEV 10
L P GIEV
Sbjct: 151 LDPFGIEV 158


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 AALSPLGIE 9
A++SP G+E
Sbjct: 75 ASISPYGLE 83


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LSPLGIEV 10
LSPLG+++
Sbjct: 37 LSPLGLDL 44


>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ALSPLGIEV 10
L P+G+E+
Sbjct: 50 GLGPMGVEI 58


>sp|RL11_NITMS|LARGE ribosomal subunit protein uL11|Nitrosopumilus maritimus (strain

Query: 2 ALSPLGIEV 10
AL PLG+ +
Sbjct: 24 ALGPLGVNI 32


>sp|RL11_THEAC|LARGE ribosomal subunit protein uL11|Thermoplasma acidophilum (strain

Query: 2 ALSPLGIEV 10
AL PLG+ V
Sbjct: 23 ALGPLGLNV 31


>sp|RL11_THEVO|LARGE ribosomal subunit protein uL11|Thermoplasma volcanium (strain

Query: 2 ALSPLGIEV 10
AL PLG+ V
Sbjct: 23 ALGPLGLNV 31


>sp|RL11_METAC|LARGE ribosomal subunit protein uL11|Methanosarcina acetivorans (strain

Query: 2 ALSPLGIEV 10
AL PLG+ +
Sbjct: 23 ALGPLGVNI 31


>sp|RL11_METBF|LARGE ribosomal subunit protein uL11|Methanosarcina barkeri (strain

Query: 2 ALSPLGIEV 10
AL PLG+ +
Sbjct: 23 ALGPLGVNI 31




51|Sequence|251|260|LGIEVDIDVE

>sp|RPO12_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo12|Archaeoglobus fulgidus (strain ATCC

Query: 2 GIEVDIDVE 10
G EVDID E
Sbjct: 9 GAEVDIDTE 17


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGIEVDID 8
LGIE+D+D
Sbjct: 124 LGIEIDVD 131


>sp|RS9_METMP|SMALL ribosomal subunit protein uS9|Methanococcus maripaludis (strain

Query: 3 IEVDIDVE 10
I+VDIDV+
Sbjct: 59 IDVDIDVK 66


>sp|RS9_METM7|SMALL ribosomal subunit protein uS9|Methanococcus maripaludis (strain

Query: 3 IEVDIDVE 10
I+VDIDV+
Sbjct: 59 IDVDIDVK 66


>sp|RS9_METM5|SMALL ribosomal subunit protein uS9|Methanococcus maripaludis (strain

Query: 3 IEVDIDVE 10
I+VDIDV+
Sbjct: 59 IDVDIDVK 66


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LGIEVDIDV 9
LG+ VDID+
Sbjct: 153 LGVFVDIDI 161


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 LGIEVDIDV 9
LG+E D+DV
Sbjct: 268 LGLERDVDV 276


>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 LGIEVDIDVE 10
+GI V ID+E
Sbjct: 208 VGIRVSIDLE 217


>sp|LYEL_HALJT|LYCOPENE elongase/hydratase|Haloarcula japonica (strain ATCC 49778

Query: 1 LGIEVDID 8
LG+ VDID
Sbjct: 259 LGVGVDID 266


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGIEVDIDVE 10
LGIEVD VE
Sbjct: 104 LGIEVDETVE 113


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LGIEVDID 8
LG+E+D+D
Sbjct: 267 LGLEIDLD 274


>sp|RS9_METVS|SMALL ribosomal subunit protein uS9|Methanococcus vannielii (strain

Query: 3 IEVDIDVE 10
I+VD+DV+
Sbjct: 59 IDVDVDVK 66


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LGIEVDID 8
LG+ +DID
Sbjct: 505 LGVNMDID 512


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 4 EVDIDVE 10
EVDIDVE
Sbjct: 922 EVDIDVE 928


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 4 EVDIDVE 10
EVDIDVE
Sbjct: 922 EVDIDVE 928


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 1 LGIEVDID 8
LGI+VD+D
Sbjct: 57 LGIDVDLD 64


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GIEVDIDV 9
G+E++ID+
Sbjct: 365 GVEIEIDI 372




52|Sequence|256|265|DIDVEHGGKR

>sp|CREN7_PYRNV|CHROMATIN protein Cren7|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DIDVEHGGKR 10
+ +VE+GGKR
Sbjct: 9 EYEVEYGGKR 18


>sp|CREN7_PYRAR|CHROMATIN protein Cren7|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DIDVEHGGKR 10
+ +VE+GGKR
Sbjct: 9 EYEVEYGGKR 18


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 VEHGGKR 10
++HGG+R
Sbjct: 112 IQHGGRR 118


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 DIDVEHGGKR 10
DIDVEH R
Sbjct: 924 DIDVEHVADR 933


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 DIDVEHGGKR 10
DIDVEH R
Sbjct: 924 DIDVEHVADR 933


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 IDVEHGGK 9
+DVE GGK
Sbjct: 46 LDVEAGGK 53


>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 2 IDVEHGGK 9
I+VEH GK
Sbjct: 50 IEVEHEGK 57


>sp|RTCA_HALSA|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 1 DIDVEH 6
DID+EH
Sbjct: 324 DIDIEH 329


>sp|RTCA_HALS3|RNA 3'-terminal phosphate cyclase|Halobacterium salinarum (strain ATCC

Query: 1 DIDVEH 6
DID+EH
Sbjct: 324 DIDIEH 329


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IDVEHGGK 9
+DV H GK
Sbjct: 573 LDVRHSGK 580


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 DIDVEHGGK 9
D+++E+ GK
Sbjct: 715 DVEIEYNGK 723


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 DIDVEHGG 8
D+D+++GG
Sbjct: 102 DVDIDYGG 109


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 VEHGGK 9
+EHGGK
Sbjct: 16 IEHGGK 21


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DVEHGGKR 10
++ HGGKR
Sbjct: 206 EIVHGGKR 213


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 VEHGGK 9
+EHGGK
Sbjct: 16 IEHGGK 21


>sp|CREN7_PYRIL|CHROMATIN protein Cren7|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DIDVEHGGKR 10
+ +VE+GG++
Sbjct: 8 EYEVEYGGRK 17


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IDVEHGGK 9
+D+ H GK
Sbjct: 575 LDIRHSGK 582


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 5 EHGGK 9
EHGGK
Sbjct: 115 EHGGK 119


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IDVEHGGK 9
+D+ H GK
Sbjct: 577 LDIRHSGK 584




53|Sequence|261|270|HGGKRSRLTP

>sp|CSA2B_SACS2|CRISPR-ASSOCIATED aCascade subunit Cas7/Csa2 2|Saccharolobus solfataricus (strain

Query: 2 GGKRSRLTP 10
GGKRSR P
Sbjct: 235 GGKRSRFLP 243


>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GKRSRLTP 10
GKRSR+ P
Sbjct: 171 GKRSRMPP 178


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGKRSRL 8
GGKRS+L
Sbjct: 113 GGKRSKL 119


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 1 HGGKRSRLTP 10
HGG R+TP
Sbjct: 324 HGGSSFRVTP 333


>sp|IF5A_META3|TRANSLATION initiation factor 5A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HGGKRSRLT 9
HGG + RLT
Sbjct: 38 HGGAKIRLT 46


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 1 HGGKRSRLT 9
HGG + RLT
Sbjct: 38 HGGAKVRLT 46


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GGKRSRLTP 10
GG+R+ L P
Sbjct: 405 GGRRASLVP 413


>sp|IF5A_THEPD|TRANSLATION initiation factor 5A|Thermofilum pendens (strain DSM 2475

Query: 2 GGKRSRLTP 10
GGKRS + P
Sbjct: 52 GGKRSIVVP 60


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 1 HGGKRSRLT 9
H G+ SRLT
Sbjct: 381 HAGEMSRLT 389


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 2 GGKRSRLTP 10
GG R RL P
Sbjct: 259 GGPRVRLVP 267


>sp|THPR_METTH|RNA 2',3'-cyclic phosphodiesterase|Methanothermobacter

Query: 4 KRSRLTP 10
KRS LTP
Sbjct: 165 KRSELTP 171


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 3 GKRSRLTP 10
GKR LTP
Sbjct: 146 GKRYELTP 153




54|Sequence|266|275|SRLTPVSPES

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RLTPVSPE 9
+LTPV PE
Sbjct: 1095 QLTPVEPE 1102


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SRLTPVSPES 10
S +TP PES
Sbjct: 681 SEVTPAEPES 690


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 2 RLTPVSPE 9
R+ P+SPE
Sbjct: 458 RVIPISPE 465


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 LTPVSPES 10
LTPV+P S
Sbjct: 491 LTPVTPRS 498


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 LTPVSPES 10
LTPV+P S
Sbjct: 489 LTPVTPRS 496


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 2 RLTPVSPE 9
RLT V+PE
Sbjct: 1309 RLTSVNPE 1316


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RLTPVSPES 10
RL PV+P S
Sbjct: 503 RLIPVNPSS 511


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 2 RLTPVSPES 10
+L P SPES
Sbjct: 453 KLVPESPES 461


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LTPVSPES 10
+ PVSPE+
Sbjct: 419 IAPVSPEA 426




55|Sequence|271|280|VSPESSSTEE

>sp|RL18A_PYRAE|LARGE ribosomal subunit protein eL20|Pyrobaculum aerophilum (strain

Query: 1 VSPESSSTEE 10
+SPE +S+EE
Sbjct: 56 ISPEDASSEE 65


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 SPESSSTEE 10
SPE S+TEE
Sbjct: 114 SPEISTTEE 122




56|Sequence|276|285|SSTEEKSSSQ

***** No hits found ******


57|Sequence|281|290|KSSSQPSSCC

>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KSSSQPSSC 9
K +S+PS C
Sbjct: 390 KHASEPSPC 398




58|Sequence|286|295|PSSCCSDPSK

>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SSCCSD 7
SSCCSD
Sbjct: 1099 SSCCSD 1104


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 3 SCCSDP 8
SCC DP
Sbjct: 217 SCCMDP 222


>sp|RS17_PYRAE|SMALL ribosomal subunit protein uS17|Pyrobaculum aerophilum (strain

Query: 1 PSSCCSDP 8
P+S C DP
Sbjct: 14 PASVCDDP 21


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 1 PSSCCSDP 8
P S C DP
Sbjct: 244 PESVCEDP 251


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSSCCSDPSK 10
P S CS P++
Sbjct: 56 PISLCSSPTR 65


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 1 PSSCCSDPS 9
P CSDP+
Sbjct: 18 PEKVCSDPN 26


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 SCCSDP 8
+CC DP
Sbjct: 85 ACCQDP 90


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 3 SCCSDP 8
+CC DP
Sbjct: 85 ACCQDP 90


>sp|RS17_METTH|SMALL ribosomal subunit protein uS17|Methanothermobacter

Query: 1 PSSCCSDPS 9
P S CSDP+
Sbjct: 9 PKSKCSDPN 17


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SCCSDP 8
+CC DP
Sbjct: 85 ACCQDP 90


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CCSDP 8
CC DP
Sbjct: 127 CCKDP 131




59|Sequence|291|300|SDPSKPGGNV

>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 SDPSKPGG 8
SDPSKPGG
Sbjct: 342 SDPSKPGG 349


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 308 SHPSRPGG 315


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 303 SHPSRPGG 310


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 315 SHPSRPGG 322


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 315 SHPSRPGG 322


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 319 SHPSRPGG 326


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 298 SHPSRPGG 305


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 SDPSKPGG 8
S PS+PGG
Sbjct: 315 SHPSRPGG 322


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 DPSKPGG 8
DP+ PGG
Sbjct: 151 DPADPGG 157


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 2 DPSKPGG 8
DP+ PGG
Sbjct: 151 DPADPGG 157


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 2 DPSKPGG 8
DP+ PGG
Sbjct: 146 DPADPGG 152


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 DPSKPGG 8
DP PGG
Sbjct: 150 DPKDPGG 156


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DPSKPGG 8
DP PGG
Sbjct: 142 DPKDPGG 148


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 DPSKPGG 8
DP PGG
Sbjct: 144 DPKDPGG 150


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 DPSKPGG 8
DP PGG
Sbjct: 144 DPKDPGG 150


>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 5 KPGGN 9
KPGGN
Sbjct: 140 KPGGN 144


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 2 DPSKPGG 8
DP+ PGG
Sbjct: 197 DPNHPGG 203


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 3 PSKPGGNV 10
P+KPG V
Sbjct: 111 PAKPGAKV 118


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 2 DPSKPGG 8
DP+ PGG
Sbjct: 197 DPNHPGG 203


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus (strain

Query: 5 KPGGN 9
KPGGN
Sbjct: 137 KPGGN 141


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DPSKPGG 8
DP+ PGG
Sbjct: 197 DPNHPGG 203


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 DPSKPGG 8
DP PGG
Sbjct: 182 DPDDPGG 188


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 1 SDPSKPGG 8
S PSK GG
Sbjct: 331 SHPSKKGG 338


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 1 SDPSKPGG 8
S PSK GG
Sbjct: 331 SHPSKKGG 338


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 PSKPGG 8
PS+PGG
Sbjct: 347 PSEPGG 352


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 SDPSKPGG 8
S PSK GG
Sbjct: 331 SHPSKKGG 338


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 DPSKPGG 8
DPS+PG
Sbjct: 146 DPSEPGA 152


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 1 SDPSKPGG 8
S PSK GG
Sbjct: 331 SHPSKKGG 338


>sp|RS9_THEVO|SMALL ribosomal subunit protein uS9|Thermoplasma volcanium (strain ATCC

Query: 3 PSKPGG 8
P KPGG
Sbjct: 115 PKKPGG 120




60|Sequence|296|305|PGGNVEGATQ

>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGGNVEGATQ 10
PGG V ATQ
Sbjct: 104 PGGLVLAATQ 113


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 1 PGGNVEGA 8
P G VEGA
Sbjct: 104 PEGTVEGA 111


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 3 GNVEGATQ 10
G+VEGAT+
Sbjct: 109 GDVEGATR 116


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GGNVEG 7
GGNVEG
Sbjct: 76 GGNVEG 81




61|Sequence|301|310|EGATQSLAEQ

>sp|PDXT_SACI1|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Saccharolobus islandicus (strain

Query: 2 GATQSLAE 9
G TQSLAE
Sbjct: 155 GKTQSLAE 162


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGATQSLAEQ 10
EGA +S+AE+
Sbjct: 290 EGAPRSVAEE 299




62|Sequence|306|315|SLAEQMRKIA

>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SLAEQMRKI 9
S+AEQ++KI
Sbjct: 671 SIAEQLKKI 679


>sp|HEM12_PYRCJ|GLUTAMYL-TRNA reductase 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 SLAEQMRKIA 10
+LAE+MRK A
Sbjct: 24 ALAEEMRKCA 33


>sp|PDXS_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Aeropyrum pernix (strain ATCC

Query: 1 SLAEQMRKIA 10
SLAE +R+IA
Sbjct: 170 SLAEALRRIA 179


>sp|RNH2_ARCFU|RIBONUCLEASE HII|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LAEQMRKI 9
LAE++RKI
Sbjct: 49 LAEEIRKI 56


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLAEQMRKIA 10
+LAE+M KIA
Sbjct: 329 TLAEKMGKIA 338




63|Sequence|311|320|MRKIALESEG

>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MRKIALESE 9
+RKIA+ES+
Sbjct: 76 VRKIAMESK 84


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KIALESEG 10
K+A+E+EG
Sbjct: 134 KVAVETEG 141


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 KIALESEG 10
K ALESEG
Sbjct: 902 KAALESEG 909


>sp|GCSH_THEAC|PROBABLE glycine cleavage system H|Thermoplasma acidophilum (strain ATCC

Query: 3 KIALESEG 10
K+A+ESEG
Sbjct: 104 KMAIESEG 111


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MRKIALESE 9
+RK+ALE++
Sbjct: 728 LRKLALEAD 736




64|Sequence|316|325|LESEGRPEEQ

>sp|BSUHB_METTH|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 1 LESEGRP 7
LES GRP
Sbjct: 61 LESTGRP 67


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain

Query: 1 LESEGRPE 8
L SEGRP+
Sbjct: 72 LVSEGRPD 79


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 LESEGRPE 8
L SEGRP+
Sbjct: 72 LVSEGRPD 79


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 LESEGRPE 8
L SEGRP+
Sbjct: 72 LVSEGRPD 79


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain

Query: 1 LESEGRPE 8
L SEGRP+
Sbjct: 72 LVSEGRPD 79


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4

Query: 1 LESEGRPE 8
L SEGRP+
Sbjct: 72 LVSEGRPD 79


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain

Query: 1 LESEGRPE 8
L SEGRP+
Sbjct: 72 LVSEGRPD 79




65|Sequence|321|330|RPEEQMESDN

***** No hits found ******


66|Sequence|326|335|MESDNCSGGD

>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DNCSGGD 10
DNC GG+
Sbjct: 281 DNCEGGE 287


>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESDNC 6
ESDNC
Sbjct: 182 ESDNC 186


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 2 ESDNCSGGD 10
E+D SGGD
Sbjct: 363 EADVISGGD 371


>sp|GLCD2_PICTO|GLUCOSE/GALACTOSE 1-dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 4 DNCSGGD 10
D+CS GD
Sbjct: 107 DDCSDGD 113


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 MESDNCSGGD 10
+E+D SGG+
Sbjct: 777 IEADRMSGGE 786


>sp|Y761_ARCFU|UNCHARACTERIZED protein AF_0761|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MESDNCSGGD 10
+E D C+G D
Sbjct: 95 VEVDYCAGSD 104




67|Sequence|331|340|CSGGDDDWTH

>sp|DUT_METAC|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 5 DDDWTH 10
DDDW H
Sbjct: 70 DDDWIH 75


>sp|PURQ_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SGGDDDWTH 10
SGGD D+ H
Sbjct: 27 SGGDPDYVH 35


>sp|DNAK_HALMA|CHAPERONE protein DnaK|Haloarcula marismortui (strain ATCC 43049

Query: 4 GDDDWTH 10
G DDW H
Sbjct: 201 GGDDWDH 207


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 SGGDDDWT 9
SGGD WT
Sbjct: 181 SGGDVHWT 188


>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 4 GDDDWTH 10
G DDW H
Sbjct: 201 GGDDWDH 207


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 4 GDDDWTH 10
G DDW H
Sbjct: 201 GGDDWDH 207


>sp|HEM1_HALWD|GLUTAMYL-TRNA reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SGGDDDWT 9
+ +DDWT
Sbjct: 392 AAAEDDWT 399


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 1 CSGGDD 6
CSGG D
Sbjct: 26 CSGGQD 31


>sp|PROA_NATPD|GAMMA-GLUTAMYL phosphate reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 DDDWT 9
DDDWT
Sbjct: 306 DDDWT 310


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CSGGDDD 7
CSG D+D
Sbjct: 196 CSGTDND 202


>sp|DUT_METBF|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 4 GDDDWTH 10
G+D W H
Sbjct: 69 GNDGWIH 75


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 2 SGGDDDW 8
SGG+D W
Sbjct: 159 SGGEDAW 165


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGDDDW 8
G D+DW
Sbjct: 123 GSDEDW 128


>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 2 SGGDDD 7
+GGDDD
Sbjct: 530 TGGDDD 535


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GDDDW 8
GDD+W
Sbjct: 345 GDDEW 349


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 3 GGDDDW 8
GGDD W
Sbjct: 95 GGDDVW 100


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 5 DDDWT 9
D+DWT
Sbjct: 190 DEDWT 194


>sp|THIL_HALSA|THIAMINE-MONOPHOSPHATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 5 DDDWTH 10
DD WTH
Sbjct: 283 DDGWTH 288




68|Sequence|336|345|DDWTHLSSKE

>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 2 DWTHLSSK 9
DW HL+ K
Sbjct: 128 DWIHLARK 135


>sp|RNP3_HALS3|RIBONUCLEASE P protein component 3|Halobacterium salinarum (strain ATCC 29341

Query: 2 DWTHLSSK 9
+WTHL+++
Sbjct: 202 EWTHLAAR 209


>sp|DUT_METAC|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 1 DDWTHL 6
DDW HL
Sbjct: 71 DDWIHL 76


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 DWTHLSSKE 10
DW HL KE
Sbjct: 138 DWEHLVPKE 146


>sp|NADM_META3|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DDWTHL 6
+DW HL
Sbjct: 137 EDWKHL 142


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 DWTHLSSKE 10
DW LSS++
Sbjct: 748 DWKKLSSED 756




69|Sequence|341|350|LSSKEVDPST

>sp|RL18A_METS5|LARGE ribosomal subunit protein eL20|Metallosphaera sedula (strain ATCC

Query: 1 LSSKEVDPST 10
L KEVDPST
Sbjct: 60 LEIKEVDPST 69


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 KEVDPST 10
KEVDP T
Sbjct: 866 KEVDPKT 872


>sp|RPO5_METS5|DNA-DIRECTED RNA polymerase subunit Rpo5|Metallosphaera sedula (strain ATCC

Query: 2 SSKEVDPST 10
SSK++DPS
Sbjct: 4 SSKKIDPSV 12


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 1 LSSKEVDP 8
++SKE+DP
Sbjct: 231 VNSKEIDP 238


>sp|TRPF_HALLT|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 SSKEVDPST 10
S +EVDP+T
Sbjct: 36 SPREVDPAT 44




70|Sequence|346|355|VDPSTGELQS

>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VDPSTGELQS 10
VDP +GE++S
Sbjct: 314 VDPESGEMRS 323


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VDPSTGELQS 10
VDP +GE++S
Sbjct: 314 VDPESGEMRS 323


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VDPSTGELQS 10
VDP +GE++S
Sbjct: 314 VDPESGEMRS 323


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VDPSTGELQS 10
VDP +GE++S
Sbjct: 314 VDPESGEMRS 323


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VDPSTGELQS 10
VDP +GE++S
Sbjct: 314 VDPESGEMRS 323


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VDPSTGELQS 10
VDP +GE++S
Sbjct: 314 VDPESGEIRS 323


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 VDPSTGELQ 9
VDP TGE++
Sbjct: 315 VDPETGEMR 323


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDPSTGEL 8
+DP+TGE+
Sbjct: 27 IDPNTGEI 34


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 DPSTGELQ 9
DP TGEL+
Sbjct: 319 DPDTGELR 326


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VDPSTGEL 8
VDP TGE+
Sbjct: 305 VDPDTGEM 312


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VDPSTGEL 8
VDP TGE+
Sbjct: 305 VDPDTGEM 312


>sp|NFI_PYRAE|ENDONUCLEASE V|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VDPSTGEL 8
VDP+TGE+
Sbjct: 143 VDPATGEV 150


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 2 DPSTGELQ 9
DP TGEL+
Sbjct: 320 DPDTGELK 327


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VDPSTGELQS 10
VDP +GE+++
Sbjct: 314 VDPESGEMRA 323


>sp|RIDA_PYRFU|2-IMINOBUTANOATE/2-IMINOPROPANOATE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VDPSTGEL 8
+DP TGE+
Sbjct: 35 IDPKTGEI 42


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 1 VDPSTGEL 8
VDPSTG +
Sbjct: 28 VDPSTGSI 35


>sp|Y854_PYRHO|RUTC family protein PH0854|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VDPSTGEL 8
+DP TGE+
Sbjct: 35 IDPKTGEI 42


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VDPSTGELQ 9
+DP TGE +
Sbjct: 322 IDPETGEFR 330


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VDPSTGELQ 9
VDP +GE++
Sbjct: 315 VDPESGEMR 323


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VDPSTGELQ 9
+DP TGE +
Sbjct: 319 IDPDTGEFK 327


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DPSTGELQS 10
DP TGE+ +
Sbjct: 157 DPETGEMNA 165


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus (Sulfolobus

Query: 1 VDPSTGE 7
VDP TGE
Sbjct: 275 VDPKTGE 281


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 1 VDPSTGEL 8
+DP TGE+
Sbjct: 36 IDPETGEI 43


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VDPSTGEL 8
VDP TGE+
Sbjct: 35 VDPKTGEV 42


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VDPSTGEL 8
+DPS+GE+
Sbjct: 357 IDPSSGEV 364


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDPSTGEL 8
+DPS+GE+
Sbjct: 356 IDPSSGEV 363


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DPSTGEL 8
DP TGEL
Sbjct: 305 DPDTGEL 311


>sp|RS8E_METTH|SMALL ribosomal subunit protein eS8|Methanothermobacter

Query: 1 VDPSTGELQ 9
VDP TG+++
Sbjct: 65 VDPETGKVE 73


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VDPSTGEL 8
VDP TG++
Sbjct: 305 VDPDTGDM 312


>sp|MTRD_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 2 DPSTGELQ 9
DP TG++Q
Sbjct: 120 DPITGDIQ 127


>sp|ALBA_NANEQ|DNA/RNA-BINDING protein Alba|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VDPSTGE 7
VDP+TG+
Sbjct: 70 VDPATGQ 76


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 VDPSTGELQ 9
+DP TGE++
Sbjct: 165 LDPDTGEVR 173


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VDPSTGELQ 9
+DP +GE++
Sbjct: 314 IDPESGEMR 322


>sp|PGK_PICTO|PHOSPHOGLYCERATE kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 VDPSTGEL 8
V+P TGE+
Sbjct: 28 VNPETGEI 35


>sp|EF1A_METKA|ELONGATION factor 1-alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 VDPSTGEL 8
+DP+TGE+
Sbjct: 357 IDPATGEV 364


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VDPSTGEL 8
VDP TG++
Sbjct: 305 VDPDTGDM 312


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 3 PSTGEL 8
PSTGEL
Sbjct: 57 PSTGEL 62


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 DPSTGELQ 9
DP TGE++
Sbjct: 203 DPKTGEVK 210


>sp|RS8E_METKA|SMALL ribosomal subunit protein eS8|Methanopyrus kandleri (strain AV19

Query: 2 DPSTGELQ 9
DP TGE++
Sbjct: 67 DPETGEVK 74


>sp|PTH_SACI7|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VDPSTGELQ 9
+DP TG+L+
Sbjct: 110 IDPITGDLK 118


>sp|PTH_SACI6|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VDPSTGELQ 9
+DP TG+L+
Sbjct: 110 IDPITGDLK 118


>sp|PTH_SACI4|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VDPSTGELQ 9
+DP TG+L+
Sbjct: 110 IDPITGDLK 118


>sp|PTH_SACI3|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VDPSTGELQ 9
+DP TG+L+
Sbjct: 110 IDPITGDLK 118


>sp|PTH_SACI2|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VDPSTGELQ 9
+DP TG+L+
Sbjct: 110 IDPITGDLK 118


>sp|PTH_SACI1|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VDPSTGELQ 9
+DP TG+L+
Sbjct: 110 IDPITGDLK 118


>sp|EF1A_HALSA|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDPSTGELQ 9
+DP++GE Q
Sbjct: 356 MDPASGETQ 364


>sp|EF1A_HALS3|ELONGATION factor 1-alpha|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDPSTGELQ 9
+DP++GE Q
Sbjct: 356 MDPASGETQ 364


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 VDPSTGELQS 10
VDP GE++S
Sbjct: 240 VDPLEGEVKS 249


>sp|KTHY_HALSA|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDPSTGELQS 10
VDP TG +S
Sbjct: 130 VDPDTGAARS 139


>sp|KTHY_HALS3|PROBABLE thymidylate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDPSTGELQS 10
VDP TG +S
Sbjct: 130 VDPDTGAARS 139


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VDPSTGEL 8
+DP TG++
Sbjct: 305 IDPDTGDM 312


>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VDPSTGE 7
+DP TGE
Sbjct: 162 LDPQTGE 168


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 2 DPSTGE 7
DP+TGE
Sbjct: 517 DPNTGE 522


>sp|MTRA_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 VDPSTGEL 8
VDP +GE+
Sbjct: 102 VDPDSGEI 109




71|Sequence|351|360|GELQSLQMPE

>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GELQSLQMPE 10
GELQ+L PE
Sbjct: 117 GELQTLTTPE 126




72|Sequence|356|365|LQMPESEGPS

>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain KIN4/I

Query: 1 LQMPESEGP 9
L MP EGP
Sbjct: 193 LYMPSPEGP 201


>sp|Y3411_METJA|UPF0304 protein MJECS11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QMPESEG 8
++PESEG
Sbjct: 51 ELPESEG 57


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 3 MPESEGPS 10
MPE+E P+
Sbjct: 1 MPETEDPA 8


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 LQMPESEG 8
L++PE EG
Sbjct: 223 LEIPEGEG 230


>sp|RADA_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 1 LQMPESEG 8
+Q+PE EG
Sbjct: 132 VQLPEDEG 139




73|Sequence|361|370|SEGPSSLDPS

>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 SEGPSSLDP 9
S GPSS+DP
Sbjct: 103 STGPSSIDP 111


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SEGPSSLDP 9
S GPSS+DP
Sbjct: 122 STGPSSIDP 130


>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 SEGPSSLDP 9
S GPSSL+P
Sbjct: 103 STGPSSLNP 111


>sp|METXA_METBU|HOMOSERINE O-acetyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SEGPSSLDP 9
+ GP+SLDP
Sbjct: 104 TTGPASLDP 112


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain

Query: 1 SEGPSSLDPS 10
S GP S+D S
Sbjct: 33 SPGPHSMDKS 42


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 SEGPSSLDPS 10
S GP S+D S
Sbjct: 33 SPGPHSMDKS 42


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SEGPSSLDPS 10
S GPSS DP+
Sbjct: 101 STGPSSEDPA 110


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 SEGPSSLDPS 10
S GP S+D S
Sbjct: 33 SPGPHSMDKS 42


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 SEGPSSLDPS 10
S GP S+D S
Sbjct: 33 SPGPHSMDKS 42


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 SEGPSSLDPS 10
S GP S+D S
Sbjct: 33 SPGPHSMDKS 42


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 SEGPSSLDPS 10
S GP S+D S
Sbjct: 33 SPGPHSMDKS 42


>sp|CBIA_METTH|COBYRINATE a,c-diamide synthase|Methanothermobacter thermautotrophicus

Query: 3 GPSSLDPS 10
GP +DPS
Sbjct: 36 GPDYIDPS 43




74|Sequence|366|375|SLDPSQEGPT

>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 SLDPSQEGP 9
S DP +EGP
Sbjct: 178 SADPRREGP 186


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 67 DPVADGPT 74


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LDPSQEGP 9
+DP+++GP
Sbjct: 431 VDPTRDGP 438


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 3 DPSQEGP 9
DP Q+GP
Sbjct: 34 DPHQDGP 40


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 66 DPVADGPT 73


>sp|TRPA_METB6|TRYPTOPHAN synthase alpha chain|Methanoregula boonei (strain DSM 21154

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 54 DPVADGPT 61


>sp|TRPA_METMP|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain DSM 14266

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 42 DPVADGPT 49


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 42 DPVADGPT 49


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 42 DPVADGPT 49


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 58 DPVADGPT 65


>sp|TRPA_METM6|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C6 /

Query: 3 DPSQEGPT 10
DP +GPT
Sbjct: 42 DPVADGPT 49




75|Sequence|371|380|QEGPTGLKEA

>sp|Y1112_PYRHO|UPF0127 protein PH1112|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EGPTGLKEA 10
EGP GLKE+
Sbjct: 94 EGPRGLKES 102


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 4 PTGLKEA 10
PTGLKEA
Sbjct: 398 PTGLKEA 404


>sp|Y1121_PYRAB|UPF0127 protein PYRAB11210|Pyrococcus abyssi (strain GE5 /

Query: 2 EGPTGLKE 9
EGP GL++
Sbjct: 96 EGPVGLRK 103


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 4 PTGLKEA 10
P GLKEA
Sbjct: 396 PAGLKEA 402


>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GPTGLKE 9
GP G+KE
Sbjct: 88 GPKGIKE 94


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QEGPTGLKE 9
QEG TGL E
Sbjct: 401 QEGRTGLAE 409


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QEGPTGLKE 9
QEG TGL E
Sbjct: 400 QEGLTGLSE 408




76|Sequence|376|385|GLKEAALYPH

>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GLKEAALYP 9
GLKE LYP
Sbjct: 334 GLKELGLYP 342


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GLKEAALYP 9
LKEA +YP
Sbjct: 117 ALKEAIVYP 125


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LKEAALYP 9
+KEA +YP
Sbjct: 138 VKEAGIYP 145


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 LKEAALYP 9
+KEA +YP
Sbjct: 138 VKEAGIYP 145


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 GLKEAAL 7
G+KEAAL
Sbjct: 37 GIKEAAL 43




77|Sequence|381|390|ALYPHLPPEA

>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LYPHLPPEA 10
L PH PPEA
Sbjct: 345 LLPHDPPEA 353


>sp|RL6_METKA|LARGE ribosomal subunit protein uL6|Methanopyrus kandleri (strain AV19 /

Query: 2 LYPHLPPE 9
+Y H PPE
Sbjct: 110 VYSHFPPE 117


>sp|MPTA_METTH|GTP cyclohydrolase MptA|Methanothermobacter thermautotrophicus (strain

Query: 3 YPHLPPE 9
YPHLP +
Sbjct: 271 YPHLPDD 277


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 1 ALYPHL 6
ALYPH+
Sbjct: 91 ALYPHM 96


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 5 HLPPE 9
HLPPE
Sbjct: 289 HLPPE 293


>sp|HPRT_METKA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 PHLPPE 9
P LPPE
Sbjct: 30 PELPPE 35


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 5 HLPPE 9
HLPPE
Sbjct: 291 HLPPE 295


>sp|AATC_METS3|A-TYPE ATP synthase subunit C|Methanobrevibacter smithii (strain ATCC

Query: 2 LYPHLPPEA 10
+YP+L P A
Sbjct: 45 IYPYLTPSA 53


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PHLPPEA 10
PHLPP A
Sbjct: 207 PHLPPNA 213


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PHLPPEA 10
PHLPP A
Sbjct: 207 PHLPPNA 213


>sp|XACJ_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacJ|Haloferax volcanii (strain ATCC

Query: 1 ALYPHL 6
ALYPH+
Sbjct: 85 ALYPHM 90


>sp|SYY_SULTO|TYROSINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALYPHLPPE 9
A++ H PPE
Sbjct: 247 AIFVHDPPE 255


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PHLPPEA 10
PHLPP A
Sbjct: 207 PHLPPNA 213


>sp|SYK_METMP|LYSINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LYPHLPPE 9
LYP LP E
Sbjct: 72 LYPFLPKE 79


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 LYPHLPPE 9
LYP LP E
Sbjct: 72 LYPFLPKE 79


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 ALYPH 5
ALYPH
Sbjct: 383 ALYPH 387


>sp|XACK_HALVD|XYLOSE/ARABINOSE import ATP-binding protein XacK|Haloferax volcanii (strain ATCC

Query: 1 ALYPH 5
ALYPH
Sbjct: 90 ALYPH 94


>sp|Y1216_METJA|PUTATIVE RNase MJ1216|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YPHLP 7
YPH+P
Sbjct: 64 YPHIP 68


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYPHLPPEA 10
LYP++P ++
Sbjct: 479 LYPYMPKKS 487


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LYPHLPPE 9
LYP LP E
Sbjct: 72 LYPFLPKE 79


>sp|Y1285_METTH|UNCHARACTERIZED HTH-type transcriptional regulator MTH_1285|Methanothermobacter

Query: 2 LYPHLPP 8
+YP +PP
Sbjct: 86 VYPEVPP 92


>sp|Y125_METJA|PUTATIVE RNase MJ0125|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YPHLP 7
YPH+P
Sbjct: 64 YPHIP 68


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM

Query: 4 PHLPPE 9
PHLP E
Sbjct: 88 PHLPDE 93


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 4 PHLPPE 9
PHLP E
Sbjct: 88 PHLPDE 93


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YPHLPP 8
Y HLPP
Sbjct: 238 YEHLPP 243


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 4 PHLPPE 9
PHLP E
Sbjct: 88 PHLPDE 93


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LYPHLPPE 9
L P LPPE
Sbjct: 250 LIPRLPPE 257


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 4 PHLPPE 9
PHLP E
Sbjct: 88 PHLPDE 93


>sp|WTPC_ARCFU|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Archaeoglobus fulgidus (strain

Query: 1 ALYPHL 6
AL+PHL
Sbjct: 80 ALFPHL 85




78|Sequence|386|395|LPPEADPRLI

>sp|MCRD_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPPEADPRLI 10
L PEADPRL+
Sbjct: 133 LGPEADPRLL 142


>sp|DPM1_PYRFU|DOLICHOL-PHOSPHATE mannosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPEADPRLI 10
PPE P+LI
Sbjct: 95 PPEVIPKLI 103


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPPEADPRLI 10
L PE DPR +
Sbjct: 41 LGPEQDPRKV 50


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LPPEADPRL 9
LP E DPRL
Sbjct: 84 LPTELDPRL 92


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 2 PPEADPRL 9
PPE DP L
Sbjct: 229 PPERDPHL 236


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 1 LPPEADPRLI 10
LP E+ PRL+
Sbjct: 41 LPKESYPRLL 50


>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PEADPRLI 10
PE D RLI
Sbjct: 54 PEGDTRLI 61


>sp|AROK_METAC|SHIKIMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PEADPRLI 10
PE D RLI
Sbjct: 54 PEGDTRLI 61


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LPPEADPRLI 10
LP E+ PRL+
Sbjct: 41 LPKESYPRLL 50


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 3 PEADPRLI 10
P +DPRL+
Sbjct: 92 PVSDPRLL 99


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 EADPRLI 10
EADPR+I
Sbjct: 124 EADPRII 130


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 EADPRLI 10
EADPR+I
Sbjct: 124 EADPRII 130


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 EADPRLI 10
EADPR+I
Sbjct: 124 EADPRII 130


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 EADPRLI 10
EADPR+I
Sbjct: 124 EADPRII 130


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 EADPRLI 10
EADPR+I
Sbjct: 124 EADPRII 130


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 EADPRLI 10
EADPR+I
Sbjct: 124 EADPRII 130


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 PEADPRLI 10
P DPRLI
Sbjct: 32 PSIDPRLI 39


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 1 LPPEADPRLI 10
LP E PRL+
Sbjct: 41 LPKETYPRLL 50


>sp|RPIA_META3|RIBOSE-5-PHOSPHATE isomerase A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 EADPRL 9
EADPRL
Sbjct: 10 EADPRL 15


>sp|THIL_METHJ|THIAMINE-MONOPHOSPHATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LPPEADPRL 9
LPPEAD ++
Sbjct: 220 LPPEADVQV 228


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EADPRLI 10
EADP++I
Sbjct: 123 EADPKII 129


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPEADPR 8
PP+AD R
Sbjct: 163 PPDADSR 169


>sp|RRP4_THEPD|EXOSOME complex component Rrp4|Thermofilum pendens (strain DSM 2475

Query: 1 LPPEADPRLI 10
+PP+ PR+I
Sbjct: 159 IPPQKVPRVI 168


>sp|KADA_THEAC|ADENYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 EADPRLI 10
EADP LI
Sbjct: 111 EADPELI 117


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 LPPEADPRLI 10
LPPE RL+
Sbjct: 133 LPPEKAARLV 142


>sp|UREE_NATPD|UREASE accessory protein UreE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LPPEADPRLI 10
+P EAD R+I
Sbjct: 126 VPVEADRRII 135


>sp|KADA_SACS2|ADENYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 EADPRLI 10
EADP++I
Sbjct: 124 EADPKII 130


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 EADPRLI 10
EADP++I
Sbjct: 376 EADPKII 382


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 2 PPEADPRLI 10
PPEA+ R I
Sbjct: 182 PPEAEIRAI 190




79|Sequence|391|400|DPRLIESLSQ

>sp|CDC6_METLZ|ORC1-TYPE DNA replication protein|Methanocorpusculum labreanum (strain ATCC

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 208 DPRVLSSLSE 217


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 DPRLIESLS 9
DPRLIE ++
Sbjct: 35 DPRLIEEIA 43


>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 209 DPRVLSSLSE 218


>sp|CDC6_PYRFU|ORC1-TYPE DNA replication protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 204 DPRVLSSLSE 213


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 209 DPRVLSSLSE 218


>sp|CDC6_METHJ|ORC1-TYPE DNA replication protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 209 DPRVLSSLSE 218


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 200 DPRVLSSLSE 209


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 203 DPRVLSSLSE 212


>sp|CDC6_PYRHO|ORC1-TYPE DNA replication protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPRLIESLSQ 10
DPR++ SLS+
Sbjct: 203 DPRVLSSLSE 212


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 DPRLIESLSQ 10
DPRL+E L +
Sbjct: 73 DPRLVEILRK 82


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DPRLIESL 8
DPRLIE +
Sbjct: 311 DPRLIEEI 318


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DPRLIES 7
DPRL+E+
Sbjct: 394 DPRLVEA 400


>sp|DPO4_HALSA|DNA polymerase IV|Halobacterium salinarum (strain ATCC 700922

Query: 1 DPRLIESLSQ 10
DP L+E++SQ
Sbjct: 334 DPALLEAVSQ 343


>sp|DPO4_HALS3|DNA polymerase IV|Halobacterium salinarum (strain ATCC 29341

Query: 1 DPRLIESLSQ 10
DP L+E++SQ
Sbjct: 334 DPALLEAVSQ 343


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 DPRLIESLSQ 10
DP++IE L +
Sbjct: 378 DPKIIEHLRE 387


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DPRLIESLSQ 10
DP++IE L +
Sbjct: 378 DPQIIEHLKE 387


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPRLIESLSQ 10
DP++IE L +
Sbjct: 378 DPQIIEHLKE 387


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 DPRLIESLS 9
DP L+E +S
Sbjct: 35 DPHLVEEIS 43


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 DPRLIESLSQ 10
DPR+ SLS+
Sbjct: 191 DPRVKSSLSE 200


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPRLIESLSQ 10
DP+L+E L +
Sbjct: 35 DPQLLEKLKR 44




80|Sequence|396|405|ESLSQMLSMG

>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ESLSQMLSMG 10
++L QML MG
Sbjct: 327 KALKQMLDMG 336


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LSQMLSMG 10
L+QMLS+G
Sbjct: 21 LAQMLSLG 28




81|Sequence|401|410|MLSMGFSDEG

>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MLSMGFSD 8
MLSMGF++
Sbjct: 359 MLSMGFTE 366


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MLSMGFSDEG 10
++S GFS+EG
Sbjct: 311 IVSSGFSEEG 320


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 MLSMGFSDE 9
++S+GFS+E
Sbjct: 415 LVSVGFSEE 423


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 2 LSMGFSDE 9
L+ GFSDE
Sbjct: 184 LAKGFSDE 191


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 4 MGFSDEG 10
MGF++EG
Sbjct: 116 MGFNNEG 122


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 4 MGFSDEG 10
MGF++EG
Sbjct: 116 MGFNNEG 122


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 2 LSMGFSDEG 10
++ GF DEG
Sbjct: 9 IASGFEDEG 17


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SMGFSDE 9
+MGF+DE
Sbjct: 21 AMGFTDE 27


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 MGFSDEG 10
MG+S+EG
Sbjct: 272 MGYSEEG 278


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 LSMGFSDEG 10
+SMG+ DE
Sbjct: 221 VSMGYEDEA 229




82|Sequence|406|415|FSDEGGWLTR

>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 FSDEGGWLTR 10
+ DEGGW R
Sbjct: 228 YDDEGGWKGR 237


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SDEGGW 7
+DEGGW
Sbjct: 10 ADEGGW 15


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 3 DEGGWL 8
DEGGW+
Sbjct: 199 DEGGWV 204


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SDEGGW 7
+DEGGW
Sbjct: 10 ADEGGW 15


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SDEGGW 7
+DEGGW
Sbjct: 10 ADEGGW 15


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 3 DEGGW 7
DEGGW
Sbjct: 199 DEGGW 203


>sp|RL10_IGNH4|LARGE ribosomal subunit protein uL10|Ignicoccus hospitalis (strain KIN4/I

Query: 4 EGGWLTR 10
E GWLT+
Sbjct: 266 EAGWLTK 272


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 3 DEGGW 7
DEGGW
Sbjct: 193 DEGGW 197


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 3 DEGGW 7
DEGGW
Sbjct: 191 DEGGW 195


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DEGGWLTR 10
DE WLTR
Sbjct: 137 DETEWLTR 144


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 SDEGGWLTR 10
SDE W+TR
Sbjct: 136 SDEIEWMTR 144


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DEGGWLTR 10
DE WLTR
Sbjct: 137 DEVEWLTR 144


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DEGGWLTR 10
DE WLTR
Sbjct: 136 DEVEWLTR 143


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DEGGWLTR 10
DE WLTR
Sbjct: 136 DEVEWLTR 143


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DEGGWLT 9
DEG W T
Sbjct: 151 DEGNWTT 157


>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 EGGWLT 9
E GWLT
Sbjct: 71 ESGWLT 76


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DEGGW 7
D+GGW
Sbjct: 270 DDGGW 274


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 1 FSDEGGWLT 9
+ EGGWL
Sbjct: 105 YESEGGWLA 113


>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DEGGWL 8
+EGGW+
Sbjct: 87 EEGGWV 92


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DEGGWL 8
+EGGW+
Sbjct: 87 EEGGWV 92


>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 2 SDEGGWLTR 10
+DEG W R
Sbjct: 202 NDEGAWTPR 210


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DEGGWL 8
D GGW+
Sbjct: 100 DNGGWI 105


>sp|BPL_METJA|PUTATIVE biotin ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSDEGG 6
+SDEGG
Sbjct: 46 YSDEGG 51


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 3 DEGGWLTR 10
D+GGW R
Sbjct: 208 DDGGWGGR 215


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FSDEGGWL 8
FS E GW+
Sbjct: 399 FSFENGWI 406


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FSDEGGWL 8
FS E GW+
Sbjct: 399 FSFENGWI 406


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SDEGGW 7
SDE GW
Sbjct: 545 SDEAGW 550


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 3 DEGGW 7
D+GGW
Sbjct: 56 DKGGW 60


>sp|RS4E_NATPD|SMALL ribosomal subunit protein eS4|Natronomonas pharaonis (strain ATCC

Query: 1 FSDEGGWLT 9
F DEGG L+
Sbjct: 97 FPDEGGRLS 105


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SDEGGW 7
+D+GGW
Sbjct: 328 TDDGGW 333


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SDEGGW 7
+D+GGW
Sbjct: 328 TDDGGW 333


>sp|TSGDD_HALVD|GLUCOSE import ATP-binding protein TsgD13|Haloferax volcanii (strain ATCC

Query: 2 SDEGGWL 8
+D GGWL
Sbjct: 117 ADAGGWL 123




83|Sequence|411|420|GWLTRLLQTK

>sp|Y4021_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 WLTRLLQ 8
WLT LLQ
Sbjct: 185 WLTELLQ 191


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GWLTRLLQTK 10
GWL L+Q +
Sbjct: 98 GWLAHLMQDR 107


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GWLTRLLQTK 10
GWL L+Q +
Sbjct: 67 GWLAHLMQDR 76


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GWLTRLL 7
GW TRLL
Sbjct: 278 GWKTRLL 284


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LTRLLQTK 10
LT+LL+TK
Sbjct: 20 LTKLLETK 27


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GWLTRLL 7
GW TRL+
Sbjct: 278 GWSTRLI 284




84|Sequence|416|425|LLQTKNYDIG

>sp|Y786_METJA|UNCHARACTERIZED protein MJ0786|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLQTKNYDIG 10
+L+T NYD+G
Sbjct: 155 ILKTHNYDLG 164


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 2 LQTKNYDI 9
+QT NYDI
Sbjct: 327 MQTINYDI 334


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 LLQTKNYDI 9
L++TK YDI
Sbjct: 172 LVETKVYDI 180


>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 2 LQTKNYDI 9
L+TKNY++
Sbjct: 77 LRTKNYEM 84


>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LLQTKNYDI 9
L+ TKN+DI
Sbjct: 178 LVVTKNHDI 186


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLQTKNYDIG 10
L K YDIG
Sbjct: 232 FLMLKGYDIG 241


>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QTKNYDI 9
++KNYDI
Sbjct: 21 KSKNYDI 27


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LQTKNYD 8
L+TKNY+
Sbjct: 331 LETKNYE 337


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQTKNYDIG 10
+NYD+G
Sbjct: 75 FNARNYDVG 83


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLQTKNYDIG 10
LL TK+ +IG
Sbjct: 855 LLNTKDVEIG 864


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 LLQTKNYDIG 10
+L+TK D+G
Sbjct: 141 ILRTKRKDVG 150


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LLQTKNY 7
LLQ KNY
Sbjct: 412 LLQQKNY 418




85|Sequence|421|430|NYDIGAALDT

>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 NYDIGAA 7
NYD+G+A
Sbjct: 559 NYDMGSA 565


>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain

Query: 1 NYDIGAALD 9
DIGAALD
Sbjct: 2 RIDIGAALD 10


>sp|MDH_NATPD|MALATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DIGAALD 9
DIGA+LD
Sbjct: 102 DIGASLD 108




86|Sequence|426|440|AALDTIQYSKHPPPL

>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 ALDTIQYSKHP 12
ALDT+Q K P
Sbjct: 877 ALDTLQNKKEP 887


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DTIQYSKHP 12
DTIQ+ K P
Sbjct: 152 DTIQWEKRP 160


>sp|Y540_ARCFU|UNCHARACTERIZED protein AF_0540|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LDTIQYSKHPPP 14
LDT+Q S PP
Sbjct: 39 LDTLQNSSTLPP 50


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ALDTIQYSKHPPPL 15
A I SKHP PL
Sbjct: 258 AFRIIDTSKHPHPL 271


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ALDTIQYSKHPPPL 15
A+ I KHP PL
Sbjct: 262 AMRIIDTEKHPHPL 275


>sp|DGGGP_METB6|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 1 AALDTIQYSKHPPP 14
AA+DTI P P
Sbjct: 60 AAIDTINRPDRPIP 73


>sp|MTRB_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 4 DTIQYSKHP 12
D+IQYS P
Sbjct: 27 DSIQYSMEP 35


>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 IQYSKHPPPL 15
IQY K+P P
Sbjct: 39 IQYFKNPKPF 48


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 DTIQYSKHP 12
DTI++ HP
Sbjct: 150 DTIEFDTHP 158


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AALDTIQYSKHPPP 14
A ++ I+Y + P P
Sbjct: 255 AEINNIKYQREPCP 268


>sp|RS4_THEON|SMALL ribosomal subunit protein uS4|Thermococcus onnurineus (strain NA1)

Query: 4 DTIQYSKHPP 13
DTI YSK P
Sbjct: 150 DTITYSKTSP 159


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 2 ALDTIQYSKHP 12
AL+ ++YSK P
Sbjct: 250 ALEIVKYSKDP 260


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 2 ALDTIQYSKHP 12
AL+ ++YSK P
Sbjct: 250 ALEIVKYSKDP 260


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DTIQYSKHP 12
DTI++ HP
Sbjct: 150 DTIEFDTHP 158


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 4 DTIQYSKHPP 13
+ I YSKH P
Sbjct: 471 EKIAYSKHLP 480


>sp|MTRB_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit B|Methanosarcina barkeri (strain

Query: 4 DTIQYSKHP 12
D+IQYS P
Sbjct: 27 DSIQYSMEP 35


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DTIQYSKHP 12
DTI++ HP
Sbjct: 151 DTIEFDTHP 159


>sp|RS4_THEGJ|SMALL ribosomal subunit protein uS4|Thermococcus gammatolerans (strain

Query: 4 DTIQYSKHPP 13
DTI Y+K+ P
Sbjct: 150 DTITYAKNSP 159


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 IQYSKHPPP 14
++Y KH PP
Sbjct: 36 LEYLKHIPP 44


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 6 IQYSKHPPP 14
++Y KH PP
Sbjct: 36 LEYLKHIPP 44


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DTIQYSKHP 12
D ++YSK+P
Sbjct: 217 DPLKYSKYP 225


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 8 YSKHPPPL 15
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 8 YSKHPPPL 15
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ALDTIQYSK 10
ALD + YSK
Sbjct: 86 ALDLVNYSK 94


>sp|PANB_AERPE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 DTIQYSKHPPPL 15
D + S+H PP
Sbjct: 219 DIVGLSRHTPPF 230


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 8 YSKHPPPL 15
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 8 YSKHPPPL 15
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 8 YSKHPPPL 15
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|RS4_THEKO|SMALL ribosomal subunit protein uS4|Thermococcus kodakarensis (strain

Query: 4 DTIQYSKHPP 13
DTI Y+K P
Sbjct: 150 DTITYAKGSP 159


>sp|PYRF_METST|OROTIDINE 5'-phosphate decarboxylase|Methanosphaera stadtmanae (strain ATCC

Query: 2 ALDTIQYS 9
A DT+QYS
Sbjct: 181 AKDTLQYS 188


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AALDTIQYSKHPPP 14
AA ++ +KH PP
Sbjct: 187 AASGKVRLAKHVPP 200




87|Sequence|431|440|IQYSKHPPPL

>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IQYSKHPPP 9
++Y KH PP
Sbjct: 36 LEYLKHIPP 44


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQYSKHPPP 9
++Y KH PP
Sbjct: 36 LEYLKHIPP 44


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 IQYSKHPP 8
I YSKH P
Sbjct: 473 IAYSKHLP 480


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 4 SKHPPP 9
SKHP P
Sbjct: 1033 SKHPAP 1038


>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQYSKHPPPL 10
IQY K+P P
Sbjct: 39 IQYFKNPKPF 48


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 4 SKHPPP 9
SKHP P
Sbjct: 996 SKHPAP 1001


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IQYSKHPPPL 10
I SKHP PL
Sbjct: 262 IDTSKHPHPL 271


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 YSKHPPPL 10
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 YSKHPPPL 10
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 1 IQYSKHP 7
I+Y++HP
Sbjct: 106 IEYAEHP 112


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YSKHPPPL 10
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YSKHPPPL 10
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|NUOCD_HALVD|NADH-QUINONE oxidoreductase subunit C/D|Haloferax volcanii (strain ATCC 29605

Query: 1 IQYSKHP 7
IQY HP
Sbjct: 131 IQYEDHP 137


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 YSKHPPPL 10
+ KHP PL
Sbjct: 358 FEKHPEPL 365


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IQYSKHPPPL 10
I KHP PL
Sbjct: 266 IDTEKHPHPL 275


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IQYSKHP 7
IQY+ HP
Sbjct: 502 IQYAYHP 508


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 4 SKHPPPL 10
+KHP PL
Sbjct: 22 NKHPHPL 28






THE END