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1|Sequence|1|10|MEAPEYLDLD

>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 4    PEYLDLD 10
            PEY+D++
Sbjct: 1031 PEYIDVN 1037


>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 2   EAPEYLD 8
           EAP+Y++
Sbjct: 110 EAPQYMN 116


>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 2   EAPEYLD 8
           EAP+Y++
Sbjct: 110 EAPQYMN 116


>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2  EAPEYLDL 9
          E+P Y+DL
Sbjct: 86 ESPMYVDL 93


>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)

Query: 2  EAPEYLDL 9
          E+P Y+DL
Sbjct: 86 ESPMYVDL 93


>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)

Query: 1   MEAPEYL 7
           MEA EYL
Sbjct: 297 MEALEYL 303


>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)

Query: 1   MEAPEYL 7
           MEA EYL
Sbjct: 297 MEALEYL 303


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 1    MEAPEYLDL 9
            +EAP  +DL
Sbjct: 1106 VEAPTIIDL 1114


>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)

Query: 1   MEAPEYL 7
           MEA EYL
Sbjct: 299 MEALEYL 305


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 3   APEYLDL 9
           +PEY++L
Sbjct: 329 SPEYIEL 335


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 493 EYLDLE 498


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 5   EYLDLD 10
           EYLDL+
Sbjct: 501 EYLDLE 506




2|Sequence|6|15|YLDLDEIDFS

>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2  LDLDEIDF 9
          LDL+EI F
Sbjct: 26 LDLEEISF 33


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  LDLDEIDF 9
          LDL+EI F
Sbjct: 26 LDLEEISF 33


>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7

Query: 1   YLDLDEID 8
           Y D+D+ID
Sbjct: 353 YADIDDID 360


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2    LDLDEIDF 9
            +DLD+IDF
Sbjct: 1986 IDLDDIDF 1993


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2    LDLDEIDF 9
            +DLD+IDF
Sbjct: 1989 IDLDDIDF 1996


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2    LDLDEIDF 9
            +DLD+IDF
Sbjct: 1989 IDLDDIDF 1996


>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)

Query: 3   DLDEIDFS 10
           DL+EI+F+
Sbjct: 207 DLNEIEFA 214


>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29

Query: 1   YLDLDEIDFS 10
           Y D+DE D +
Sbjct: 357 YADVDEADMA 366


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2    LDLDEIDF 9
            L +DEI+F
Sbjct: 2157 LKMDEIEF 2164


>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5

Query: 1  YLDLDE 6
          YLDL+E
Sbjct: 59 YLDLEE 64


>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2

Query: 1  YLDLDE 6
          YLDL+E
Sbjct: 59 YLDLEE 64


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 3   DLDEIDF 9
           D+D IDF
Sbjct: 878 DVDNIDF 884


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 3   DLDEIDF 9
           D+D IDF
Sbjct: 878 DVDNIDF 884


>sp|VE6_HPV23|PROTEIN E6|Human papillomavirus 23

Query: 1  YLDLDEIDF 9
          YL+L E D+
Sbjct: 52 YLELREFDY 60


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   YLDLDE 6
           +LDLDE
Sbjct: 659 WLDLDE 664


>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   YLDLDE 6
           +LDLDE
Sbjct: 658 WLDLDE 663


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 4   LDEIDF 9
           +DE+DF
Sbjct: 499 MDELDF 504


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 1   YLDLDEID 8
           +LD+DE D
Sbjct: 939 FLDVDEGD 946


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 1   YLDLDEID 8
           Y DLDE +
Sbjct: 351 YADLDEAE 358


>sp|NSP5_ROTHB|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Indonesia/B37/XXXX/G8P[X])

Query: 1   YLDLDEIDFS 10
           ++  D++DFS
Sbjct: 102 HIGCDQVDFS 111


>sp|VE6_HPV38|PROTEIN E6|Human papillomavirus 38

Query: 1  YLDLDEIDF 9
          Y++L E D+
Sbjct: 36 YIELREFDY 44




3|Sequence|11|20|EIDFSDDISY

>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    IDFSDDISY 10
            ID+SD +SY
Sbjct: 5513 IDYSDAVSY 5521


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1    EIDFSDDISY 10
            E+D+++ IS+
Sbjct: 1089 EVDYNEKISF 1098


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1    EIDFSDDI 8
            +IDFSD +
Sbjct: 2128 QIDFSDQV 2135


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1    EIDFSDDI 8
            +IDFSD +
Sbjct: 2128 QIDFSDQV 2135


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   EIDFSDDISY 10
           +ID SD+ SY
Sbjct: 187 QIDDSDNSSY 196


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1    EIDFSDDI 8
            +IDFSD +
Sbjct: 2128 KIDFSDQV 2135


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1   EIDFSDDI 8
           +IDF DDI
Sbjct: 248 KIDFLDDI 255


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2   IDFSDDI 8
           I+FSD+I
Sbjct: 929 INFSDEI 935


>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   IDFSDDISY 10
           +DF   I+Y
Sbjct: 102 VDFGSSITY 110


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 6   DDISY 10
           DDISY
Sbjct: 470 DDISY 474


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 509 YKDDISY 515


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 4   FSDDISY 10
           + DDISY
Sbjct: 517 YKDDISY 523




4|Sequence|16|25|DDISYSVTSL

>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    DDISYSV 7
            DDI++SV
Sbjct: 2141 DDITFSV 2147


Query: 3    ISYSVTSL 10
            ++YSVT L
Sbjct: 2872 VTYSVTPL 2879


>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)

Query: 3   ISYSVTSL 10
           ISY+VTS+
Sbjct: 127 ISYNVTSM 134


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1    DDISYSVTS 9
            DD+ +SV+S
Sbjct: 2118 DDVIFSVSS 2126


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3    ISYSVTSL 10
            ++YSVT L
Sbjct: 2878 VTYSVTPL 2885


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen

Query: 1   DDISYSVTS 9
           DDI YS T 
Sbjct: 195 DDIKYSQTG 203


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 1   DDISYSVTS 9
           DDI YS T 
Sbjct: 197 DDIKYSQTG 205


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 5   YSVTSL 10
           YSVTSL
Sbjct: 454 YSVTSL 459


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 1   DDISYSVTS 9
           DDI YS T 
Sbjct: 198 DDIKYSQTG 206


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 1   DDISYSVTS 9
           DDI YS T 
Sbjct: 198 DDIKYSQTG 206


>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1  DDISYSVTSL 10
          +DI+YS++ L
Sbjct: 14 NDIAYSMSIL 23




5|Sequence|21|30|SVTSLKTIPE

>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   TSLKTIPE 10
           T LKT PE
Sbjct: 377 TLLKTYPE 384


>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)

Query: 3   TSLKTIPE 10
           T LKT PE
Sbjct: 377 TLLKTYPE 384


>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)

Query: 3   TSLKTIPE 10
           T LKT PE
Sbjct: 343 TLLKTYPE 350


>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   TSLKTIPE 10
           T LKT PE
Sbjct: 377 TLLKTYPE 384


>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)

Query: 3   TSLKTIPE 10
           T LKT PE
Sbjct: 377 TLLKTYPE 384


>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)

Query: 3   TSLKTIPE 10
           T LKT PE
Sbjct: 377 TLLKTYPE 384




6|Sequence|26|35|KTIPELCRRC

>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1699 RVLPELVRQC 1708


Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1085 KAIPEWCCRTC 1095


Query: 1    KTIPELCRR 9
            K  P LC R
Sbjct: 2902 KKTPRLCTR 2910


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1699 RVLPELVRQC 1708


Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1085 KAIPEWCCRTC 1095


Query: 1    KTIPELCRR 9
            K  P LC R
Sbjct: 2902 KKTPRLCTR 2910


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPELCRR 9
            K IPE C R
Sbjct: 1083 KVIPEWCCR 1091


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPELCRR 9
            K IPE C R
Sbjct: 1083 KVIPEWCCR 1091


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPE-LCRRC 10
            K IPE  CR+C
Sbjct: 1083 KIIPEWCCRKC 1093


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPELCRR 9
            K IPE C R
Sbjct: 1083 KVIPEWCCR 1091


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPELCRR 9
            K IPE C R
Sbjct: 1083 KVIPEWCCR 1091


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1083 KVIPEWCCRTC 1093


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1    KTIPELCRRC 10
            + +PEL R+C
Sbjct: 1697 RVLPELIRQC 1706


Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1083 KVIPEWCCRTC 1093


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    KTIPELCRRC 10
            + +PEL R C
Sbjct: 1697 RVLPELIREC 1706


Query: 1    KTIPELCRR 9
            K IPE C R
Sbjct: 1083 KIIPEWCCR 1091


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1592 KTVPCLCR 1599


>sp|VE6_HPV13|PROTEIN E6|Human papillomavirus 13

Query: 1  KTIPELCRRC 10
          KTI +LC+ C
Sbjct: 11 KTIDQLCKEC 20


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1591 KTVPCLCR 1598


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1591 KTVPCLCR 1598


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1591 KTVPCLCR 1598


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1591 KTVPCLCR 1598


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1589 KTVPCLCR 1596


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1590 KTVPCLCR 1597


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1591 KTVPCLCR 1598


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1    KTIPELCR 8
            KT+P LCR
Sbjct: 1590 KTVPCLCR 1597


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1   KTIPELCR 8
           KT+P LCR
Sbjct: 258 KTVPCLCR 265


>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KVIPEWCCRSC 1094


>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1    KTIPELCRRC 10
            + IP++ R C
Sbjct: 1700 RVIPQIVREC 1709


>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 1   KTIPELC 7
           K IP+LC
Sbjct: 195 KVIPDLC 201


>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1084 KIIPEWCCRSC 1094


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    KTIPE-LCRRC 10
            K IPE  CR C
Sbjct: 1077 KIIPEWCCRSC 1087


>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)

Query: 4  PELCRRC 10
          PEL RRC
Sbjct: 48 PELTRRC 54


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1    KTIPELCR 8
            +T+P LCR
Sbjct: 1589 RTVPCLCR 1596


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1    KTIPELCR 8
            +T+P LCR
Sbjct: 1594 RTVPCLCR 1601


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  IPELCRRC 10
          + ELCR C
Sbjct: 18 LAELCRLC 25


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 1  KTIPELCRR 9
          +TIP +C +
Sbjct: 54 RTIPRICTK 62


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 2   TIPELCRRC 10
           T PE C +C
Sbjct: 309 TKPEECEKC 317


>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)

Query: 4   PELCRRC 10
           P+ C+ C
Sbjct: 409 PDFCKNC 415


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 2   TIPELCRRC 10
           T PE C +C
Sbjct: 309 TKPEECEKC 317


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 2   TIPELCRRC 10
           T PE C +C
Sbjct: 309 TKPEECEKC 317


>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 1  KTIPELCRR 9
          +TIP +C +
Sbjct: 54 RTIPRICTK 62


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2    TIPELC 7
            TIPE C
Sbjct: 1334 TIPETC 1339


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 3   IPELCRR 9
           IPE+C R
Sbjct: 467 IPEICFR 473


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  IPELCRRC 10
          + ELCR C
Sbjct: 18 LAELCRLC 25


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 2    TIPELC 7
            TIPE C
Sbjct: 1334 TIPETC 1339


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 1  KTIPELCRR 9
          K IP++C +
Sbjct: 54 KNIPKICSK 62


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1   KTIPEL 6
           KT+PEL
Sbjct: 567 KTLPEL 572


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   KTIPEL 6
           KT+PEL
Sbjct: 567 KTLPEL 572


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 1   KTIPELC 7
           K +P+LC
Sbjct: 195 KELPDLC 201


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   KTIPELC 7
           K +P+LC
Sbjct: 195 KELPDLC 201


>sp|VE6_HPV04|PROTEIN E6|Human papillomavirus 4

Query: 1   KTIPELCRRC 10
           K I E+C RC
Sbjct: 91  KKIKEICIRC 100


>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   ELCRRC 10
           +LCR C
Sbjct: 270 DLCRSC 275


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 3   IPELCRRC 10
           +PE   RC
Sbjct: 645 VPEASHRC 652


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 3   IPELCRRC 10
           +PE   RC
Sbjct: 645 VPEASHRC 652


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 3   IPELCRRC 10
           +PE   RC
Sbjct: 645 VPEASHRC 652


>sp|VE6_HPV43|PROTEIN E6|Human papillomavirus 43

Query: 1  KTIPELCRRC 10
          +TI ELC  C
Sbjct: 11 RTIFELCDEC 20


Query: 1   KTIPELCRRC 10
           +T+ +LC RC
Sbjct: 95  QTVFDLCIRC 104


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3    IPELCR 8
            +PELC+
Sbjct: 2448 LPELCK 2453


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1  KTIPELCRR 9
          +T P  CRR
Sbjct: 34 QTAPPPCRR 42


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 1  KTIPELCRR 9
          +T P  CRR
Sbjct: 34 QTAPPPCRR 42


>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44

Query: 1  KTIPELCRRC 10
          ++I +LC+ C
Sbjct: 11 QSIDQLCKEC 20


>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   PELCRR 9
           PE CRR
Sbjct: 111 PEKCRR 116


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 5   ELCRRC 10
           E C RC
Sbjct: 650 EYCNRC 655


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 5   ELCRRC 10
           E C RC
Sbjct: 650 EYCNRC 655


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 1  KTIPELCRRC 10
            + ELCR C
Sbjct: 71 NALAELCRFC 80


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 5    ELCRRC 10
            E+C+ C
Sbjct: 1391 EMCKNC 1396


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 5    ELCRRC 10
            E+C+ C
Sbjct: 1392 EMCKNC 1397


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 5    ELCRRC 10
            E+C+ C
Sbjct: 1392 EMCKNC 1397


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 5    ELCRRC 10
            E+C+ C
Sbjct: 1394 EMCKNC 1399


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 5    ELCRRC 10
            E+C+ C
Sbjct: 1394 EMCKNC 1399


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 3    IPELCRRC 10
            +PE  R C
Sbjct: 1779 VPEAIRNC 1786


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 3    IPELCRRC 10
            +PE  R C
Sbjct: 1779 VPEAIRNC 1786


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   KTIPELCRRC 10
           KTI  L R C
Sbjct: 115 KTISSLNRSC 124


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 3  IPELCR 8
          +P LCR
Sbjct: 81 LPSLCR 86


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   IPELC 7
           +PELC
Sbjct: 263 LPELC 267


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   IPELC 7
           +PELC
Sbjct: 263 LPELC 267


>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   KTIPELCRR 9
           K +P LC R
Sbjct: 236 KPLPSLCVR 244


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3    IPELCR 8
            +PELC+
Sbjct: 2440 LPELCK 2445


>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3  IPELCR 8
          +PE CR
Sbjct: 91 VPESCR 96


>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  IPELCR 8
          +PE CR
Sbjct: 91 VPESCR 96


>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3  IPELCR 8
          +PE CR
Sbjct: 91 VPESCR 96


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   ELCRRC 10
           +LCR C
Sbjct: 267 DLCRSC 272


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1    KTIPELC 7
            KT+P LC
Sbjct: 1606 KTLPCLC 1612


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1    KTIPELC 7
            KT+P LC
Sbjct: 1606 KTLPCLC 1612




7|Sequence|31|40|LCRRCDTQNE

>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)

Query: 3   RRCDTQN 9
           +RC TQN
Sbjct: 463 KRCPTQN 469


>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2

Query: 5  CDTQNE 10
          CD+QNE
Sbjct: 12 CDSQNE 17


>sp|GN_HHV11|ENVELOPE glycoprotein N|Human herpesvirus 1 (strain 17)

Query: 4  RCDTQN 9
          RC+TQN
Sbjct: 45 RCETQN 50


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    CRRCDTQ 8
            CRRC  +
Sbjct: 5765 CRRCPAE 5771


>sp|DUSP_VARV|DUAL specificity protein phosphatase H1|Variola virus

Query: 4   RCDTQNE 10
           +CD +NE
Sbjct: 98  KCDQRNE 104


>sp|DUSP_VAR67|DUAL specificity protein phosphatase OPG106|Variola virus (isolate

Query: 4   RCDTQNE 10
           +CD +NE
Sbjct: 98  KCDQRNE 104


>sp|DUSP_VACCC|DUAL specificity protein phosphatase OPG106|Vaccinia virus (strain

Query: 4   RCDTQNE 10
           +CD +NE
Sbjct: 98  KCDQRNE 104


>sp|DUSP_MONPV|DUAL specificity protein phosphatase OPG106|Monkeypox virus (MPXV)

Query: 4   RCDTQNE 10
           +CD +NE
Sbjct: 98  KCDQRNE 104


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    CRRCDTQ 8
            CRRC  +
Sbjct: 5742 CRRCPAE 5748


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2   CRRCDTQNE 10
           CR C T  E
Sbjct: 922 CRHCSTDKE 930


>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  LCRRCDTQN 9
          LCR C++ +
Sbjct: 21 LCRLCESAD 29


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 908 CDTEN 912


Query: 2   CRRCDTQNE 10
           CR   TQN+
Sbjct: 559 CRAYRTQND 567


>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 908 CDTEN 912


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 909 CDTEN 913


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 908 CDTEN 912


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 909 CDTEN 913


>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort

Query: 2   CRRCDTQ 8
           C R DTQ
Sbjct: 561 CHRGDTQ 567


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 908 CDTEN 912


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 5   CDTQN 9
           CDT+N
Sbjct: 911 CDTEN 915


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 5   CDTQN 9
           CDT+N
Sbjct: 911 CDTEN 915


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 897 CDTEN 901


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 895 CDTEN 899


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 5   CDTQN 9
           CDT+N
Sbjct: 894 CDTEN 898


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 897 CDTEN 901


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 5   CDTQN 9
           CDT+N
Sbjct: 897 CDTEN 901




8|Sequence|36|45|DTQNEDRSVS

>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3    QNEDRSVS 10
            QN+DR VS
Sbjct: 2259 QNDDREVS 2266


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1    DTQNEDR 7
            DTQ+EDR
Sbjct: 1078 DTQDEDR 1084


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1    DTQNEDR 7
            DTQ+EDR
Sbjct: 2409 DTQDEDR 2415


>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 1   DTQNEDRSVS 10
           D Q+E+RS S
Sbjct: 168 DVQSEERSYS 177


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   DTQNEDRSVS 10
           D Q+E+RS S
Sbjct: 167 DVQSEERSYS 176


>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   DTQNEDR 7
           DTQ+ED+
Sbjct: 106 DTQSEDK 112


>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2   TQNEDRSVS 10
           T NED+ +S
Sbjct: 190 TMNEDKPIS 198


>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   DTQNEDR 7
           D +NEDR
Sbjct: 337 DIENEDR 343




9|Sequence|41|50|DRSVSSSSWN

>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 4    VSSSSWN 10
            VSS SWN
Sbjct: 1709 VSSRSWN 1715


>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka

Query: 2  RSVSSSSW 9
          RSVS  +W
Sbjct: 73 RSVSMETW 80


>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)

Query: 2  RSVSSSSW 9
          RSVS  +W
Sbjct: 73 RSVSMETW 80


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 2   RSVSSSSW 9
           RS++S  W
Sbjct: 499 RSIASGGW 506




10|Sequence|46|55|SSSWNCGIST

>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   SSWNCG 7
           + WNCG
Sbjct: 389 TCWNCG 394


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   SSWNCG 7
           + WNCG
Sbjct: 388 TCWNCG 393


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   SSWNCG 7
           + WNCG
Sbjct: 388 TCWNCG 393


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   SSWNCG 7
           + WNCG
Sbjct: 389 TCWNCG 394


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   SSWNCG 7
           + WNCG
Sbjct: 389 TCWNCG 394


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   SSWNCG 7
           + WNCG
Sbjct: 389 TCWNCG 394


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 391 WNCG 394


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 390 WNCG 393


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 393 WNCG 396


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 393 WNCG 396


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 391 WNCG 394


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 392 WNCG 395


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4   WNCG 7
           WNCG
Sbjct: 390 WNCG 393


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    SSSWNCGIS 9
            S+ W CG S
Sbjct: 6459 SAEWKCGYS 6467


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2   SSWNCG 7
           S WNCG
Sbjct: 418 SMWNCG 423


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    SSSWNCG 7
            S+ W CG
Sbjct: 6430 SAEWKCG 6436


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 3   SWNCGIST 10
           SW CG+ +
Sbjct: 160 SWRCGLKS 167


>sp|U23_HHV6Z|PROTEIN U23|Human herpesvirus 6B (strain Z29)

Query: 4   WNCGIS 9
           W CGIS
Sbjct: 250 WICGIS 255


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4    WNCGI 8
            WNC +
Sbjct: 6287 WNCNV 6291


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4    WNCGI 8
            WNC +
Sbjct: 6310 WNCNV 6314


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4    WNCGI 8
            WNC +
Sbjct: 6279 WNCNV 6283


>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7

Query: 3   SWNCGIS 9
           SWN G++
Sbjct: 313 SWNTGVA 319


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4    WNCGI 8
            WNC +
Sbjct: 6317 WNCNV 6321


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4    WNCGI 8
            WNC +
Sbjct: 6337 WNCNV 6341


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4    WNCGI 8
            WNC +
Sbjct: 6367 WNCNV 6371


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4    WNCGI 8
            WNC +
Sbjct: 6289 WNCNV 6293


>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56

Query: 4   WNCGIS 9
           WN G+S
Sbjct: 435 WNIGLS 440


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   SSSWNCGI 8
           + +WN G+
Sbjct: 317 AQAWNAGL 324


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SSSWNC 6
           +S+WNC
Sbjct: 210 NSTWNC 215


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 4   WNCGIS 9
           WN G+S
Sbjct: 429 WNFGVS 434




11|Sequence|51|60|CGISTLITNT

>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1   CGISTLITNT 10
           CG STL T T
Sbjct: 695 CGESTLYTRT 704


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2   GISTLITNT 10
           GIS +IT+T
Sbjct: 949 GISEIITST 957


>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /

Query: 1   CGISTLITNT 10
           C I  LITN+
Sbjct: 336 CDIHKLITNS 345


>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 1   CGISTLITNT 10
           C I  LITN+
Sbjct: 334 CDIHKLITNS 343




12|Sequence|56|65|LITNTQKPTG

>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)

Query: 1   LITNTQKPT 9
           LITN+Q PT
Sbjct: 339 LITNSQNPT 347


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1   LITNTQKPTG 10
           L+ NT+ PTG
Sbjct: 539 LLNNTRPPTG 548


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1   LITNTQKPT 9
           ++T+TQ PT
Sbjct: 493 VVTSTQTPT 501


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 1   LITNTQKPT 9
           +IT+TQ+P+
Sbjct: 689 VITSTQQPS 697


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1   LITNTQKP 8
           +I N+QKP
Sbjct: 183 VIKNSQKP 190


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 1   LITNTQKPT 9
           +IT+TQ+P+
Sbjct: 689 VITSTQQPS 697


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   LITNTQKP 8
           +I N+QKP
Sbjct: 183 VIKNSQKP 190


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1   LITNTQKPTG 10
           ++T+T KP G
Sbjct: 333 IVTSTSKPVG 342


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LITNTQKPTG 10
           L++NT+ P G
Sbjct: 538 LLSNTRPPQG 547


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LITNTQKPTG 10
           L+ NT+ P G
Sbjct: 538 LLNNTRPPQG 547


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LITNTQKPTG 10
           L+ NT+ P G
Sbjct: 538 LLNNTRPPQG 547


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LITNTQKPTG 10
           L+ NT+ P G
Sbjct: 538 LLNNTRPPQG 547


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LITNTQKPTG 10
           L+ NT+ P G
Sbjct: 538 LLNNTRPPQG 547


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LITNTQKPTG 10
           L+ NT+ P G
Sbjct: 538 LLNNTRPPQG 547


>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)

Query: 1  LITNTQKPT 9
          LITNT++ T
Sbjct: 89 LITNTEEKT 97




13|Sequence|61|70|QKPTGIADVY

>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48

Query: 3   PTGIADVY 10
           PTGI D Y
Sbjct: 425 PTGIEDTY 432


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    QKPTGIADV 9
            + PTG+A+V
Sbjct: 2889 EPPTGVAEV 2897


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PKGITDVF 1143


>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50

Query: 3   PTGIADVY 10
           P+GI D Y
Sbjct: 428 PSGIGDTY 435


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PKGIIDVF 1143


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PDGIHDVF 1143


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PDGIHDVF 1143


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PDGIHDVF 1143


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PDGIHDVF 1143


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3    PTGIADVY 10
            P GI DV+
Sbjct: 1136 PDGIHDVF 1143


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2    KPTGIADV 9
            +P GIAD+
Sbjct: 1720 EPAGIADL 1727


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   QKPTGIADVY 10
           +KP  I D+Y
Sbjct: 101 EKPKFIPDLY 110


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 1   QKPTGIADVY 10
           +KP  I D+Y
Sbjct: 101 EKPKFIPDLY 110


>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 1   QKPTGIADVY 10
           +KP  I D+Y
Sbjct: 101 EKPKFIPDLY 110


>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 1   QKPTGIADVY 10
           +KP  I D+Y
Sbjct: 101 EKPKFIPDLY 110


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3   PTGIADVY 10
           P GI D Y
Sbjct: 694 PRGILDAY 701


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   PTGIADVY 10
           P GI D Y
Sbjct: 709 PRGILDAY 716


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 3   PTGIADVY 10
           P+GI D Y
Sbjct: 422 PSGIEDQY 429


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 4  TGIADV 9
          TGIAD+
Sbjct: 14 TGIADI 19


>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65

Query: 3   PTGIADVY 10
           P+GI D Y
Sbjct: 422 PSGIEDQY 429


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 3   PTGIADV 9
           PTG+A V
Sbjct: 828 PTGLAHV 834


>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60

Query: 3   PTGIADVY 10
           P GI D Y
Sbjct: 420 PQGIEDAY 427


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2    KPTGIADV 9
            KP G+A++
Sbjct: 1775 KPRGLAEI 1782




14|Sequence|66|75|IADVYSKFRP

>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 4   VYSKFR 9
           +YSKFR
Sbjct: 476 IYSKFR 481


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 2   ADVYSKFRP 10
           +DV SKF P
Sbjct: 696 SDVSSKFTP 704


>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)

Query: 1   IADVYSKFRP 10
           I+D YS+  P
Sbjct: 215 ISDYYSRLSP 224


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 3    DVYSKFR 9
            +VY KFR
Sbjct: 2118 EVYEKFR 2124


>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)

Query: 2   ADVYSKFR 9
           AD+Y K R
Sbjct: 274 ADIYCKMR 281


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 4   VYSKFR 9
           +Y+KFR
Sbjct: 460 IYNKFR 465


>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)

Query: 2   ADVYSKFR 9
           AD+Y K R
Sbjct: 273 ADIYCKMR 280


>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45

Query: 3   DVYSKFRP 10
           DVY+ F P
Sbjct: 348 DVYADFPP 355




15|Sequence|71|80|SKFRPVKRVS

>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    SKFRPVKRVS 10
            +KF PVK  S
Sbjct: 5455 NKFVPVKEAS 5464


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2    KFRPVK 7
            KFRP++
Sbjct: 1444 KFRPIR 1449


>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54

Query: 2   KFRPVKRVS 10
           + RPVKR +
Sbjct: 473 RLRPVKRAA 481


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2    KFRPVK 7
            KFRP++
Sbjct: 1444 KFRPIR 1449


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2    KFRPVK 7
            KFRP++
Sbjct: 1444 KFRPIR 1449


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2    KFRPVK 7
            KFRP++
Sbjct: 1444 KFRPIR 1449


>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12

Query: 2   KFRPVKRVS 10
           K RP+K+V+
Sbjct: 206 KVRPIKKVA 214


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    SKFRPVKRVS 10
            +KF PVK  S
Sbjct: 5430 NKFVPVKPAS 5439


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1    SKFRPV 6
            SKF+P+
Sbjct: 1131 SKFKPI 1136


>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)

Query: 3   FRPVKRVS 10
           F P+ RVS
Sbjct: 728 FAPITRVS 735




16|Sequence|76|85|VKRVSPLKHQ

>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1    VKRVSPLKHQ 10
            +KRV+PL ++
Sbjct: 1556 LKRVAPLLYK 1565


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    VKRVSPLKH 9
            +KR  P KH
Sbjct: 2538 LKRGEPTKH 2546


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1    VKRVSPLKHQ 10
            +KR++PL ++
Sbjct: 1557 LKRIAPLLYK 1566


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    VKRVSPLKHQ 10
            +KR++PL ++
Sbjct: 1557 LKRIAPLLYK 1566


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    VKRVSPLKHQ 10
            +KR++PL ++
Sbjct: 1557 LKRIAPLLYK 1566




17|Sequence|81|90|PLKHQPETLE

>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   KHQPETLE 10
           K+ PET+E
Sbjct: 915 KNNPETIE 922


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 3   KHQPETLE 10
           K+ PET+E
Sbjct: 915 KNNPETIE 922


>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)

Query: 3   KHQPETLE 10
           K+ PET+E
Sbjct: 916 KNNPETIE 923


>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)

Query: 3   KHQPETLE 10
           K+ PET+E
Sbjct: 916 KNNPETIE 923


>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   KHQPETLE 10
           K+ PET+E
Sbjct: 916 KNNPETIE 923


>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United

Query: 2   LKHQPET 8
           LKH P+T
Sbjct: 98  LKHGPDT 104


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4  HQPETLE 10
          HQPE L+
Sbjct: 61 HQPEPLK 67


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    PLKHQPETL 9
            PLK + ET+
Sbjct: 1123 PLKEREETM 1131


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 4  HQPETLE 10
          HQPE L+
Sbjct: 40 HQPEPLK 46


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3   KHQPET 8
           K+QPET
Sbjct: 323 KNQPET 328


>sp|TAT_HV2CA|PROTEIN Tat|Human immunodeficiency virus type 2

Query: 1   PLKHQPETLE 10
           P K Q +TLE
Sbjct: 113 PAKKQKKTLE 122




18|Sequence|86|95|PETLENNESD

>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1    PETLEN 6
            PETLEN
Sbjct: 1710 PETLEN 1715


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1    PETLEN 6
            PETLEN
Sbjct: 1710 PETLEN 1715


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1    PETLEN 6
            PETLEN
Sbjct: 1710 PETLEN 1715


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1  PETLENN 7
          P+TLE N
Sbjct: 6  PQTLEEN 12


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 2   ETLENNES 9
           ET+EN+E+
Sbjct: 354 ETVENSEN 361


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 3   TLENNES 9
           + ENNES
Sbjct: 270 SFENNES 276


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5   ENNESD 10
           ENNE D
Sbjct: 646 ENNEKD 651


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 1   PETLENNES 9
           PE  ENN+S
Sbjct: 98  PEEEENNQS 106




19|Sequence|91|100|NNESDDQKNQ

>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1   NNESDDQKN 9
           NNE+D +KN
Sbjct: 140 NNEADWRKN 148


>sp|PG135_VACCC|VIRION membrane protein OPG135|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  NESDDQKN 9
          +E DD+KN
Sbjct: 69 SEQDDKKN 76


>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)

Query: 2   NESDD 6
           NESDD
Sbjct: 294 NESDD 298




20|Sequence|96|105|DQKNQKVVEY

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 5   QKVVEY 10
           QKV+EY
Sbjct: 890 QKVIEY 895




21|Sequence|101|110|KVVEYQKGGE

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 1   KVVEYQK 7
           KV+EYQ+
Sbjct: 891 KVIEYQE 897


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 2    VVEYQKGGE 10
            +VE+ +GG+
Sbjct: 1058 IVEFTQGGD 1066


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 2    VVEYQKGGE 10
            +VE+ +GG+
Sbjct: 1058 IVEFTQGGD 1066


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 3   VEYQKG 8
           VEY+KG
Sbjct: 133 VEYEKG 138


>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 4   EYQKGG 9
           EY KGG
Sbjct: 337 EYTKGG 342


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 4   EYQKGG 9
           EY KGG
Sbjct: 621 EYTKGG 626


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   EYQKGG 9
           EY KGG
Sbjct: 621 EYTKGG 626


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 1   KVVEYQKGG 9
           ++ +YQK G
Sbjct: 821 RLCQYQKAG 829


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2   VVEYQKG 8
           VVE QKG
Sbjct: 882 VVEKQKG 888


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 3    VEYQKGG 9
            +EY KGG
Sbjct: 1383 LEYIKGG 1389


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3    VEYQKGG 9
            +EY KGG
Sbjct: 1384 LEYIKGG 1390


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3    VEYQKGG 9
            +EY KGG
Sbjct: 1386 LEYIKGG 1392


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3    VEYQKGG 9
            +EY KGG
Sbjct: 1386 LEYIKGG 1392


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3    VEYQKGG 9
            +EY KGG
Sbjct: 1387 LEYIKGG 1393




22|Sequence|106|115|QKGGESDLGP

>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P

Query: 5   ESDLGP 10
           E DLGP
Sbjct: 152 EGDLGP 157


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 5   ESDLGP 10
           ES+LGP
Sbjct: 481 ESELGP 486


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2    KGGESDL 8
            +GGE+DL
Sbjct: 1133 EGGEADL 1139


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2    KGGESDL 8
            +GGE+DL
Sbjct: 1134 EGGEADL 1140


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   GGESDLGP 10
           GG+  +GP
Sbjct: 293 GGQVQIGP 300


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   GGESDLGP 10
           GG+  +GP
Sbjct: 291 GGQVQIGP 298


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3    GGESD 7
            GGESD
Sbjct: 2388 GGESD 2392




23|Sequence|111|120|SDLGPQPQEL

>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1   SDLGPQPQE 9
           S LGPQP++
Sbjct: 221 SRLGPQPEQ 229


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5  PQPQEL 10
          P PQEL
Sbjct: 78 PNPQEL 83


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5  PQPQEL 10
          P PQEL
Sbjct: 80 PNPQEL 85


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5  PQPQEL 10
          P PQEL
Sbjct: 79 PNPQEL 84


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPAQ 229


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPAQ 229


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 5  PQPQEL 10
          P PQEL
Sbjct: 78 PSPQEL 83


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5  PQPQEL 10
          P PQEL
Sbjct: 78 PSPQEL 83


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5  PQPQEL 10
          P PQEL
Sbjct: 78 PSPQEL 83


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPTQ 229


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPTQ 229


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPTQ 229


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPAQ 229


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 2    DLGPQPQEL 10
            DLG  PQ++
Sbjct: 1820 DLGLSPQQI 1828


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   SDLGPQPQE 9
           S LGPQP +
Sbjct: 221 SRLGPQPPQ 229


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3    LGPQPQ 8
            LGP PQ
Sbjct: 1184 LGPSPQ 1189


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 2   DLGPQPQ 8
           DL P+PQ
Sbjct: 161 DLNPKPQ 167


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   DLGPQPQ 8
           DL P+PQ
Sbjct: 161 DLNPKPQ 167


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   PQPQEL 10
           P+PQEL
Sbjct: 452 PKPQEL 457


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   PQPQEL 10
           P+PQEL
Sbjct: 452 PKPQEL 457


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2    DLGPQPQ 8
            DLG  PQ
Sbjct: 1217 DLGASPQ 1223


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2    DLGPQPQ 8
            DLG  PQ
Sbjct: 1217 DLGASPQ 1223


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 2    DLGPQPQ 8
            DLG  PQ
Sbjct: 1217 DLGASPQ 1223


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2    DLGPQPQ 8
            DLG  PQ
Sbjct: 1218 DLGASPQ 1224


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1   SDLGPQPQEL 10
           +DL P+ QE+
Sbjct: 107 TDLSPRLQEI 116


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 3    LGPQPQEL 10
            LGP+ Q+L
Sbjct: 1076 LGPRTQQL 1083


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 3    LGPQPQEL 10
            LGP+ Q+L
Sbjct: 1076 LGPRTQQL 1083


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 3    LGPQPQEL 10
            LGP+ Q+L
Sbjct: 1076 LGPRTQQL 1083


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 1   SDLGPQPQEL 10
           +DLGP   +L
Sbjct: 537 NDLGPATAQL 546


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3    LGPQPQEL 10
            LGP+ Q+L
Sbjct: 1076 LGPRTQQL 1083


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3    LGPQPQEL 10
            LGP+ Q+L
Sbjct: 1076 LGPRTQQL 1083


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 1   SDLGPQPQEL 10
           S   PQPQ L
Sbjct: 418 SVFSPQPQTL 427


>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a

Query: 2  DLGPQPQ 8
          D+GP P+
Sbjct: 82 DIGPTPR 88


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 1   SDLGPQPQEL 10
           S   PQPQ L
Sbjct: 418 SVFSPQPQTL 427


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2  DLGPQP 7
          D+GP P
Sbjct: 63 DIGPAP 68




24|Sequence|116|125|QPQELGPGDG

>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 2   PQELGPG 8
           PQ +GPG
Sbjct: 605 PQNIGPG 611


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 2   PQELGPG 8
           PQ +GPG
Sbjct: 605 PQNIGPG 611


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 2   PQELGPG 8
           PQ +GPG
Sbjct: 605 PQNIGPG 611


>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTHW|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTAM|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTHL|NON-STRUCTURAL protein 5|Rotavirus A (strain

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTWI|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTHT|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTKU|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/KUN/1980/G2P1B[4])

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 56 PEDIGPSD 63


>sp|NSP5_ROTHK|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTH6|NON-STRUCTURAL protein 5|Rotavirus A (strain

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTHB|NON-STRUCTURAL protein 5|Rotavirus A (strain

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTH5|NON-STRUCTURAL protein 5|Rotavirus A (strain

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|NSP5_ROTHD|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/United

Query: 2  PQELGPGD 9
          P+++GP D
Sbjct: 57 PEDIGPSD 64


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1  QPQELGPG 8
          QP+ LGP 
Sbjct: 56 QPKALGPA 63


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  PQELG 6
          PQELG
Sbjct: 80 PQELG 84


>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)

Query: 2   PQELGPGDG 10
           P+++GP DG
Sbjct: 160 PEDVGPEDG 168


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 2  PQELGP 7
          P ELGP
Sbjct: 27 PDELGP 32


>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)

Query: 2  PQELGPG 8
          P+EL PG
Sbjct: 18 PEELTPG 24


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   PQELGPGD 9
           P E+ PGD
Sbjct: 391 PSEILPGD 398


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2  PQELGP 7
          P ELGP
Sbjct: 27 PDELGP 32


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   PQELGPGD 9
           P E+ PGD
Sbjct: 391 PSEILPGD 398


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2   PQELGPG 8
           PQ++G G
Sbjct: 245 PQDMGKG 251


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2   PQELGPG 8
           PQ++G G
Sbjct: 245 PQDMGKG 251


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1012 LGPADG 1017


Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RRVGPGEG 1911


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1012 LGPADG 1017


Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1016 LGPADG 1021


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1016 LGPADG 1021


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1012 LGPADG 1017


Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P

Query: 3   QELGPGDG 10
           QE+  GDG
Sbjct: 106 QEIALGDG 113


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1016 LGPADG 1021


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1016 LGPADG 1021


Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1908 RHVGPGEG 1915


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 3   QELGPGD 9
           +EL PGD
Sbjct: 193 EELSPGD 199


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1905 RHIGPGEG 1912


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 5    LGPGDG 10
            LGP DG
Sbjct: 1016 LGPADG 1021


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1905 RHIGPGEG 1912


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 6   GPGDG 10
           GPG+G
Sbjct: 782 GPGEG 786


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1904 RHVGPGEG 1911


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1910 RHVGPGEG 1917


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1910 RHVGPGEG 1917


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 6   GPGDG 10
           GPG+G
Sbjct: 782 GPGEG 786


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 6   GPGDG 10
           GPG+G
Sbjct: 782 GPGEG 786


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1912 RHVGPGEG 1919


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3    QELGPGDG 10
            + +GPG+G
Sbjct: 1909 RHVGPGEG 1916




25|Sequence|121|130|GPGDGVGGPP

>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain

Query: 1   GPGDGVGGP 9
           GPG  +G P
Sbjct: 96  GPGPNIGSP 104


>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 1   GPGDGVGGP 9
           GPG  +G P
Sbjct: 96  GPGPNIGSP 104


>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11

Query: 4  DGVGGPP 10
          DGV  PP
Sbjct: 41 DGVSAPP 47


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 4   DGVGGPP 10
           DGV  PP
Sbjct: 231 DGVSAPP 237


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1   GPGDGVGG 8
           GP D VGG
Sbjct: 157 GPEDTVGG 164


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 3   GDGVGGPP 10
           GDG+ G P
Sbjct: 422 GDGITGVP 429


>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGTP 84


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 1   GPGDGVGGP 9
           GPG   GGP
Sbjct: 261 GPGADAGGP 269


>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGIRVGGTP 84


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3   GDGVGGP 9
           GD  GGP
Sbjct: 543 GDNYGGP 549


>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGIRVGGTP 84


>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGTP 84


>sp|UL59_HCMVA|UNCHARACTERIZED protein UL59|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  DGVGGPP 10
          DGV  PP
Sbjct: 31 DGVRSPP 37


>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus

Query: 2  PGDGVGGP 9
          P DG G P
Sbjct: 71 PKDGTGVP 78


>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  PGDGVGGP 9
          P DG G P
Sbjct: 71 PKDGTGVP 78


>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  PGDGVGGP 9
          P DG G P
Sbjct: 71 PKDGTGVP 78


>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)

Query: 2  PGDGVGGP 9
          P DG G P
Sbjct: 71 PKDGTGVP 78


>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)

Query: 2  PGDGVGGP 9
          P DG G P
Sbjct: 71 PKDGTGVP 78


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 5    GVGGPP 10
            GVGG P
Sbjct: 3846 GVGGKP 3851


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5    GVGGPP 10
            GVGG P
Sbjct: 3846 GVGGKP 3851


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 5    GVGGP 9
            G+GGP
Sbjct: 3533 GIGGP 3537


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 5    GVGGP 9
            G+GGP
Sbjct: 3533 GIGGP 3537


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 350 GVGGP 354


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 348 GVGGP 352


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 351 GVGGP 355


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 348 GVGGP 352


>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 348 GVGGP 352


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 358 GVGGP 362


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 5    GVGGPP 10
            G+GG P
Sbjct: 3823 GIGGKP 3828


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5    GVGGPP 10
            G+GG P
Sbjct: 3823 GIGGKP 3828


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 353 GVGGP 357


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 348 GVGGP 352


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 355 GVGGP 359


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 5    GVGGPP 10
            G+GG P
Sbjct: 3832 GIGGTP 3837


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 5    GVGGPP 10
            G+GG P
Sbjct: 3832 GIGGTP 3837


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 349 GVGGP 353


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 348 GVGGP 352


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 350 GVGGP 354


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 5    GVGGP 9
            G+GGP
Sbjct: 1009 GIGGP 1013


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGTP 84


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGTP 84


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 348 GVGGP 352


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   GDGVGGPP 10
           GD + GPP
Sbjct: 284 GDSILGPP 291


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGTP 84


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 351 GVGGP 355


>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGAP 84


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGAP 84


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 2   PGDGVGGP 9
           PGD  G P
Sbjct: 261 PGDSPGNP 268


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 2   PGDGVGGP 9
           PGD  G P
Sbjct: 263 PGDSPGNP 270


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   GVGGP 9
           GVGGP
Sbjct: 355 GVGGP 359


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17

Query: 1  GPGDGVGGPP 10
          GPG  VGG P
Sbjct: 75 GPGVRVGGAP 84


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   GVGGP 9
           GVGGP
Sbjct: 352 GVGGP 356


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 354 GVGGP 358


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 355 GVGGP 359


>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 350 GVGGP 354


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5   GVGGP 9
           GVGGP
Sbjct: 351 GVGGP 355




26|Sequence|126|135|VGGPPGKSSE

>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins

Query: 3   GPPGKSSE 10
            PPGKSSE
Sbjct: 135 NPPGKSSE 142


>sp|PHOSP_RABVS|PHOSPHOPROTEIN virus (strain SAD B19)

Query: 3   GPPGKSSE 10
            PPGKSSE
Sbjct: 135 NPPGKSSE 142


>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)

Query: 3   GPPGKSSE 10
            PPGKSSE
Sbjct: 135 NPPGKSSE 142


>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 4   PPGKSSE 10
           PPG+SSE
Sbjct: 136 PPGRSSE 142


>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)

Query: 3   GPPGKSSE 10
            PPGKSSE
Sbjct: 135 NPPGKSSE 142


>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)

Query: 4   PPGKSSE 10
           PPG+SSE
Sbjct: 136 PPGRSSE 142


>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)

Query: 2   GGPPG 6
           GGPPG
Sbjct: 383 GGPPG 387


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 3   GPPGKSSE 10
           GPPG++ E
Sbjct: 569 GPPGEAVE 576


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    VGGPPG 6
            V GPPG
Sbjct: 5590 VQGPPG 5595


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    VGGPPG 6
            V GPPG
Sbjct: 5576 VQGPPG 5581


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    VGGPPG 6
            V GPPG
Sbjct: 5614 VQGPPG 5619


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    VGGPPG 6
            V GPPG
Sbjct: 5634 VQGPPG 5639


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    VGGPPG 6
            V GPPG
Sbjct: 5664 VQGPPG 5669


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 4    PPGKSSE 10
            PPGK+ E
Sbjct: 1592 PPGKAHE 1598


Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 4    PPGKSSE 10
            PPGK+ E
Sbjct: 1592 PPGKAHE 1598


Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)

Query: 1   VGGPPGKS 8
           +GGP GK+
Sbjct: 327 LGGPLGKT 334


>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann

Query: 1   VGGPPGKS 8
           +GGP GK+
Sbjct: 327 LGGPLGKT 334


>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)

Query: 1   VGGPPGKS 8
           +GGP GK+
Sbjct: 327 LGGPLGKT 334


>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  GPPGKSSE 10
          GPPG  ++
Sbjct: 47 GPPGSPTD 54


>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  GPPGKSSE 10
          GPPG  ++
Sbjct: 47 GPPGSPTD 54


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    VGGPPG 6
            + GPPG
Sbjct: 5251 IQGPPG 5256


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    VGGPPG 6
            + GPPG
Sbjct: 5276 IQGPPG 5281


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 2   GGPPGKSSE 10
            GP  KSS+
Sbjct: 879 AGPKAKSSQ 887


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 4    PPGKS 8
            PPGKS
Sbjct: 1813 PPGKS 1817


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 4    PPGKS 8
            PPGKS
Sbjct: 1814 PPGKS 1818


>sp|SHDAG_HDVV2|SMALL delta antigen|Hepatitis delta virus genotype III

Query: 2  GGPPGKSS 9
          GGPP K +
Sbjct: 66 GGPPAKRA 73


>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 4   PPGKSSE 10
           PP +SSE
Sbjct: 136 PPRRSSE 142


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3  GPPGKSSE 10
          GPP K S+
Sbjct: 60 GPPAKKSK 67


>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)

Query: 4   PPGKSSE 10
           PP +SSE
Sbjct: 136 PPRRSSE 142


>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)

Query: 4   PPGKSSE 10
           PP +SSE
Sbjct: 136 PPRRSSE 142


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1    VGGPPG 6
            + GPPG
Sbjct: 1209 IHGPPG 1214


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    VGGPPG 6
            + GPPG
Sbjct: 1216 IHGPPG 1221


>sp|LHDAG_HDVV2|LARGE delta antigen|Hepatitis delta virus genotype III

Query: 2  GGPPGKSS 9
          GGPP K +
Sbjct: 66 GGPPAKRA 73


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1    VGGPPG 6
            + GPPG
Sbjct: 1212 IHGPPG 1217


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    VGGPPG 6
            + GPPG
Sbjct: 1216 IHGPPG 1221




27|Sequence|131|140|GKSSEPSTSL

>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   SEPSTSL 10
           SEPSTSL
Sbjct: 519 SEPSTSL 525


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4   SEPSTSL 10
           SEPSTSL
Sbjct: 504 SEPSTSL 510


>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GKSSEPSTS 9
           GK S+P T+
Sbjct: 378 GKGSDPETT 386




28|Sequence|136|145|PSTSLGELEH

>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain

Query: 1   PSTSLGELEH 10
           P+TS+ E++H
Sbjct: 427 PNTSIKEIKH 436


>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)

Query: 1   PSTSLGELEH 10
           P+TS+ E++H
Sbjct: 428 PNTSIKEIKH 437


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    PSTSLGEL 8
            PS SLG+L
Sbjct: 1249 PSASLGDL 1256


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 4   SLGELEH 10
           S+G LEH
Sbjct: 845 SVGRLEH 851


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 4   SLGELEH 10
           S+G LEH
Sbjct: 846 SVGRLEH 852


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1    PSTSLGELE 9
            P T  GELE
Sbjct: 1880 PKTHRGELE 1888


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1   PSTSLGELEH 10
           PST+ GE+ +
Sbjct: 719 PSTASGEVRN 728




29|Sequence|141|150|GELEHYDLDM

>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2   ELEHYDLDM 10
           EL H DLD+
Sbjct: 171 ELPHADLDV 179


>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 2   ELEHYDLDM 10
           E+E+ D+DM
Sbjct: 186 EIEYGDIDM 194


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 3   LEHYDLDM 10
           ++HY +DM
Sbjct: 440 VDHYKIDM 447


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 1   GELEHYDL 8
           GE+ HY L
Sbjct: 135 GEIYHYGL 142


>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1   GELEHYDLD 9
           G+L+ YD D
Sbjct: 388 GDLKQYDSD 396


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 1   GELEHY 6
           GE +HY
Sbjct: 163 GEFKHY 168


>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4  EHYDLD 9
          EH DLD
Sbjct: 77 EHVDLD 82


>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4  EHYDLD 9
          EH DLD
Sbjct: 77 EHVDLD 82


>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4  EHYDLD 9
          EH DLD
Sbjct: 77 EHVDLD 82


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 3   LEHYD 7
           L+HYD
Sbjct: 475 LDHYD 479


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 3  LEHYDLD 9
          L++Y+LD
Sbjct: 16 LDYYELD 22


>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26

Query: 3  LEHYDLD 9
          L++Y+LD
Sbjct: 16 LDYYELD 22




30|Sequence|146|155|YDLDMDEILD

>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   YDLDMDEIL 9
           YD+DMDE +
Sbjct: 208 YDMDMDEYI 216


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   YDLDMDEIL 9
           YD+DMDE +
Sbjct: 208 YDMDMDEYI 216


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 1  YDLDMDEILD 10
          Y+LD D+++D
Sbjct: 19 YELDSDKLVD 28


>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)

Query: 1   YDLDMDEILD 10
           Y ++MD+I+D
Sbjct: 247 YPMNMDQIID 256


>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   YDLDMDEILD 10
           Y ++MD+I+D
Sbjct: 251 YPMNMDQIID 260


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 1   YDLDMDEILD 10
           Y ++MD+I+D
Sbjct: 251 YPMNMDQIID 260


>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)

Query: 3   LDMDEILD 10
           LD+DEIL+
Sbjct: 429 LDIDEILE 436


>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   LDMDEILD 10
           LD+DEIL+
Sbjct: 429 LDIDEILE 436


>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)

Query: 3   LDMDEILD 10
           LD+DEIL+
Sbjct: 429 LDIDEILE 436


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 2   DLDMDEILD 10
           ++DM++ILD
Sbjct: 697 NVDMEQILD 705


>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)

Query: 3   LDMDEILD 10
           LD+DEIL+
Sbjct: 429 LDIDEILE 436


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DLDMDEILD 10
           ++DM++ILD
Sbjct: 697 NVDMEQILD 705


>sp|E3_YLDV|PROTEIN E3 homolog|Yaba-like disease virus (YLDV)

Query: 3   LDMDEILD 10
           + MDEILD
Sbjct: 172 ITMDEILD 179


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2  DLDMDEI 8
          DLD++EI
Sbjct: 25 DLDLEEI 31


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  DLDMDEI 8
          DLD++EI
Sbjct: 25 DLDLEEI 31


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 824 YDFDWDE 830


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 823 YDFDWDE 829


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 823 YDFDWDE 829


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 838 YDFDWDE 844


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 1  YDLDMDEILD 10
          Y+LD D++ D
Sbjct: 19 YELDSDKLSD 28


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 838 YDFDWDE 844


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 824 YDFDWDE 830


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 823 YDFDWDE 829


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1   YDLDMDE 7
           YD D DE
Sbjct: 823 YDFDWDE 829


>sp|UL96_HHV6Z|PROTEIN U68|Human herpesvirus 6B (strain Z29)

Query: 3  LDMDEILD 10
          LD+DEI+D
Sbjct: 84 LDVDEIID 91


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)

Query: 4  DMDEILD 10
          ++DE+LD
Sbjct: 84 ELDEVLD 90


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 4  DMDEILD 10
          ++DE+LD
Sbjct: 84 ELDEVLD 90


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 4  DMDEILD 10
          ++DE+LD
Sbjct: 84 ELDEVLD 90


>sp|UL76_HCMVM|PROTEIN UL76|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   YDLDMDEILD 10
           +DL  D +LD
Sbjct: 178 FDLCTDSVLD 187


>sp|UL76_HCMVA|PROTEIN UL76|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   YDLDMDEILD 10
           +DL  D +LD
Sbjct: 178 FDLCTDSVLD 187


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1   YDLDMDEI 8
           YD D D +
Sbjct: 765 YDFDTDRV 772


>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   DLDMDEILD 10
           DL +DEI+D
Sbjct: 145 DLTVDEIID 153


>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)

Query: 2   DLDMDEILD 10
           DLD D ++D
Sbjct: 217 DLDTDVVID 225


>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   DLDMDEILD 10
           DL +DEI+D
Sbjct: 145 DLTVDEIID 153


>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)

Query: 2   DLDMDEILD 10
           DL +DEI+D
Sbjct: 145 DLTVDEIID 153


>sp|UL96_HHV6U|PROTEIN U68|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  LDMDEILD 10
          LD+DEI+D
Sbjct: 84 LDVDEIID 91


>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)

Query: 2   DLDMDEILD 10
           DLD D ++D
Sbjct: 217 DLDTDVVID 225


>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   DLDMDEILD 10
           DLD D ++D
Sbjct: 217 DLDTDVVID 225


>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)

Query: 2   DLDMDEILD 10
           DLD D ++D
Sbjct: 217 DLDTDVVID 225


>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   YDLDMDEI 8
           Y+LD DE+
Sbjct: 290 YELDEDEM 297


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   YDLDMDEI 8
           Y+LD DE+
Sbjct: 290 YELDEDEM 297


>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   DLDMDEILD 10
           DLD D ++D
Sbjct: 217 DLDTDVVID 225


>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)

Query: 2   DLDMDEILD 10
           DLD D ++D
Sbjct: 217 DLDTDVVID 225


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1    YDLDMDEI 8
            Y LD D++
Sbjct: 2173 YQLDFDKV 2180


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1    YDLDMDEI 8
            Y LD D++
Sbjct: 2171 YQLDFDKV 2178


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1   YDLDMDEIL 9
           Y LD D+I 
Sbjct: 807 YQLDSDDIF 815




31|Sequence|151|160|DEILDVPYIK

>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5    DVPYIK 10
            DVPYIK
Sbjct: 3787 DVPYIK 3792


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5    DVPYIK 10
            DVPYIK
Sbjct: 3807 DVPYIK 3812


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5    DVPYIK 10
            DVPYIK
Sbjct: 3837 DVPYIK 3842


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 5    DVPYIK 10
            DVPYIK
Sbjct: 3787 DVPYIK 3792


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 5    DVPYIK 10
            DVPYIK
Sbjct: 3807 DVPYIK 3812


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 5    DVPYIK 10
            DVPYIK
Sbjct: 3837 DVPYIK 3842


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 2   EILDVPY 8
           E+LD PY
Sbjct: 348 ELLDTPY 354


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   DEILDVPY 8
           DEI+DV Y
Sbjct: 391 DEIVDVQY 398


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 2   EILDVPY 8
           EIL VPY
Sbjct: 343 EILKVPY 349


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 1   DEILDVPY 8
           DEI+DV Y
Sbjct: 391 DEIVDVQY 398


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 5    DVPYIK 10
            DVPYI+
Sbjct: 3327 DVPYIQ 3332


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 4    LDVPYI 9
            LD+PYI
Sbjct: 2879 LDLPYI 2884


>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   DEILDVPYI 9
           DE+ DVP I
Sbjct: 138 DELYDVPGI 146


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   DEILDVPYI 9
           DE+ DVP I
Sbjct: 138 DELYDVPGI 146


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 1  DEILDVP 7
          DE L+VP
Sbjct: 84 DEFLNVP 90


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 1  DEILDVP 7
          DE L+VP
Sbjct: 84 DEFLNVP 90


>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41

Query: 4  LDVPYI 9
          LD+P+I
Sbjct: 22 LDIPFI 27


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 4  LDVPYI 9
          LD+P+I
Sbjct: 22 LDIPFI 27


>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P

Query: 2   EILDVPY 8
           ++LD PY
Sbjct: 287 QVLDQPY 293


>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)

Query: 3   ILDVPY 8
           I+D+PY
Sbjct: 199 IIDIPY 204


>sp|VE6_HPV56|PROTEIN E6|Human papillomavirus 56

Query: 2  EILDVPYI 9
          E+L++P I
Sbjct: 20 EVLEIPLI 27


>sp|SPI1_MONPV|SERINE proteinase inhibitor 1|Monkeypox virus (MPXV)

Query: 3   ILDVPY 8
           I+D+PY
Sbjct: 201 IIDIPY 206


>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   ILDVPY 8
           I+D+PY
Sbjct: 197 IIDIPY 202


>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus

Query: 2   EILDVPY 8
            I+D+PY
Sbjct: 215 SIIDIPY 221


>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate

Query: 2   EILDVPY 8
            I+D+PY
Sbjct: 215 SIIDIPY 221




32|Sequence|156|165|VPYIKSSQQL

>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)

Query: 2   PYIKSSQQL 10
           P++K SQQL
Sbjct: 109 PFLKPSQQL 117


>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)

Query: 2   PYIKSSQQL 10
           P++K SQQL
Sbjct: 109 PFLKPSQQL 117


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   YIKSSQQL 10
           YIK+SQ+L
Sbjct: 598 YIKASQEL 605


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   YIKSSQQL 10
           YIK+SQ+L
Sbjct: 598 YIKASQEL 605


>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 3   YIKSSQQL 10
           YIK+SQ+L
Sbjct: 590 YIKASQEL 597


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    VPYIKSSQQL 10
            +PY+   QQ+
Sbjct: 1713 IPYLAEGQQI 1722


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    VPYIKSSQQL 10
            +PY+   QQ+
Sbjct: 1720 IPYLAEGQQI 1729


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    VPYIKSSQQL 10
            +PY+   QQ+
Sbjct: 1719 IPYLAEGQQI 1728


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1    VPYIKSSQQL 10
            +PY+   QQL
Sbjct: 1719 LPYLVEGQQL 1728


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2  PYIKSSQQ 9
          PY+KS Q+
Sbjct: 13 PYVKSLQK 20


>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1

Query: 1   VPYIKS 6
           VPY+KS
Sbjct: 224 VPYLKS 229


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2  PYIKSSQQ 9
          PY+KS Q+
Sbjct: 13 PYVKSLQR 20


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1    VPYIKSSQQL 10
            +PY+   QQ+
Sbjct: 1720 IPYLVEGQQI 1729


>sp|ORF11_TTVV3|ORF1/1 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 2   PYIKSSQQ 9
           P+I SSQ+
Sbjct: 137 PWIHSSQE 144


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 2   PYIKSSQQ 9
           P+I SSQ+
Sbjct: 674 PWIHSSQE 681




33|Sequence|161|170|SSQQLASFTK

>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 1   SSQQLASFT 9
           +SQ+L SFT
Sbjct: 596 ASQELISFT 604


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   SSQQLASFT 9
           +SQ+L SFT
Sbjct: 597 ASQELISFT 605


>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)

Query: 1   SSQQLASFT 9
           +SQ+L SFT
Sbjct: 593 ASQELISFT 601


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SSQQLASFT 9
           +SQ+L S+T
Sbjct: 601 ASQELVSYT 609


>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)

Query: 1   SSQQLASFT 9
           +S+QL SFT
Sbjct: 190 NSEQLFSFT 198


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SSQQLASFT 9
           +SQ+L S+T
Sbjct: 601 ASQELVSYT 609




34|Sequence|166|175|ASFTKVTSEK

>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   SFTKVTSEK 10
           S+TK+ +EK
Sbjct: 197 SYTKMRAEK 205




35|Sequence|171|180|VTSEKRILGL

>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1  VTSEKRILGL 10
          +T++KRI+G+
Sbjct: 51 ITADKRIMGM 60


>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate

Query: 1  VTSEKRILGL 10
          V  +KR+LGL
Sbjct: 11 VKLQKRVLGL 20


>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus

Query: 1  VTSEKRILGL 10
          ++S K+ILGL
Sbjct: 1  MSSFKKILGL 10


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 513 VEREKRAIGL 522


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    SEKRILGL 10
            + KR+LGL
Sbjct: 5817 AAKRVLGL 5824


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 508 VEREKRAIGL 517


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 503 VEREKRAIGL 512


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 505 VEREKRAIGL 514


>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 503 VEREKRAIGL 512


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 492 VQREKRAVGL 501


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 502 VQREKRAVGL 511


>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   VTSEKRILGL 10
           V  EKR +GL
Sbjct: 493 VQREKRAVGL 502


>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)

Query: 1   VTSEKRILGL 10
           VTS +  LGL
Sbjct: 162 VTSTRNALGL 171


>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)

Query: 1   VTSEKRILGL 10
           VTS +  LGL
Sbjct: 162 VTSTRNALGL 171


>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)

Query: 1   VTSEKRILGL 10
           VTS +  LGL
Sbjct: 162 VTSTRNALGL 171


>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4   EKRILGL 10
           E+R++GL
Sbjct: 131 ERRVIGL 137


>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   EKRILGL 10
           E+R++GL
Sbjct: 131 ERRVIGL 137


>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   EKRILGL 10
           E+R++GL
Sbjct: 131 ERRVIGL 137




36|Sequence|176|185|RILGLCTTIN

>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 2   ILGLCTTI 9
           I+GLCT +
Sbjct: 687 IIGLCTCV 694


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2   ILGLCTTI 9
           I+GLCT +
Sbjct: 688 IIGLCTCV 695


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2   ILGLCTTI 9
           I+GLCT +
Sbjct: 689 IIGLCTCV 696


>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)

Query: 1  RILGLCTTIN 10
          R++GLC  I+
Sbjct: 31 RVIGLCIRIS 40


>sp|PG161_VACCC|PROTEIN OPG161|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  RILGLCTTIN 10
          R++GLC  I+
Sbjct: 31 RVIGLCIRIS 40


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2   ILGLCTTI 9
           ++GLCT +
Sbjct: 689 VIGLCTCV 696


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1   RILGLCTT 8
           R +GLC+T
Sbjct: 209 RNIGLCST 216


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1   RILGLCTT 8
           R +GLC+T
Sbjct: 209 RNIGLCST 216


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2   ILGLCT 7
           I+GLCT
Sbjct: 689 IVGLCT 694


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 2  ILGLCTTI 9
          ILG+CT I
Sbjct: 26 ILGICTLI 33


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 2  ILGLCTTI 9
          ILG+CT I
Sbjct: 26 ILGICTLI 33


>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)

Query: 2   ILGLCTTIN 10
           ILGL  T+N
Sbjct: 186 ILGLLRTLN 194


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1   RILGLCTT 8
           R +GLC T
Sbjct: 207 RNIGLCAT 214


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1   RILGLCTT 8
           R +GLC T
Sbjct: 206 RNIGLCAT 213


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1   RILGLCTT 8
           R +GLC T
Sbjct: 207 RNIGLCAT 214


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 1   RILGLCTT 8
           R LG+C T
Sbjct: 509 RSLGICVT 516


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   ILGLCTTIN 10
           +LG  TT+N
Sbjct: 627 VLGRLTTVN 635


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3   LGLCTT 8
           +GLC+T
Sbjct: 210 IGLCST 215


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3   LGLCTT 8
           +GLC+T
Sbjct: 210 IGLCST 215


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3   LGLCTT 8
           +GLC+T
Sbjct: 210 IGLCST 215


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3   LGLCTT 8
           +GLC+T
Sbjct: 210 IGLCST 215


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 3   LGLCTT 8
           +GLC+T
Sbjct: 210 IGLCST 215


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2    ILGLCTTI 9
            I+G+C+ I
Sbjct: 1321 IIGICSLI 1328


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   LCTTIN 10
           LCTT++
Sbjct: 734 LCTTVD 739


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 5   LCTTIN 10
           LCTT++
Sbjct: 734 LCTTVD 739


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1   RILGLCTT 8
           R LG+C T
Sbjct: 509 RSLGICIT 516


>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   ILGLCT 7
           I+GLCT
Sbjct: 134 IIGLCT 139


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 3    LGLCTTI 9
            +GLC T+
Sbjct: 1608 IGLCKTL 1614


>sp|PG005_MONPV|PROTEIN OPG005|Monkeypox virus (MPXV)

Query: 2   ILGLCT 7
           I+GLCT
Sbjct: 106 IIGLCT 111


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 4   GLCTTIN 10
           G+C T+N
Sbjct: 924 GICGTMN 930


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   GLCTTIN 10
           G+C T+N
Sbjct: 924 GICGTMN 930




37|Sequence|181|190|CTTINGLSGK

>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   CTTINGLSGK 10
           C T NG S K
Sbjct: 182 CDTTNGTSRK 191


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1   CTTINGL 7
           CT  NGL
Sbjct: 326 CTEFNGL 332


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2    TTINGLS 8
            TT++GLS
Sbjct: 1964 TTVDGLS 1970


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1   CTTINGLS 8
           CT  NGL+
Sbjct: 151 CTLSNGLT 158


>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11

Query: 1   CTTINGLSG 9
           CTT +G+S 
Sbjct: 227 CTTEDGVSA 235


>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)

Query: 2  TTINGL 7
          TTING+
Sbjct: 44 TTINGV 49


>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11

Query: 1  CTTINGLSG 9
          CTT +G+S 
Sbjct: 37 CTTEDGVSA 45




38|Sequence|186|195|GLSGKACSTG

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3   SGKACSTG 10
           SGKA STG
Sbjct: 531 SGKASSTG 538


>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)

Query: 2  LSGKACS 8
          LSG++CS
Sbjct: 52 LSGRSCS 58


>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8

Query: 2   LSGKACSTG 10
           L+G A STG
Sbjct: 144 LTGPAASTG 152


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 3  SGKACSTG 10
          +G++CS G
Sbjct: 53 AGRSCSDG 60


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3    SGKACST 9
            SGK+C++
Sbjct: 1050 SGKSCTS 1056


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3    SGKACST 9
            SGK+C++
Sbjct: 1050 SGKSCTS 1056


>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate

Query: 2  LSGKACS 8
          L+G++CS
Sbjct: 52 LAGRSCS 58


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 2  LSGKACS 8
          L+G++CS
Sbjct: 52 LAGRSCS 58


>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate

Query: 2  LSGKACS 8
          L+G++CS
Sbjct: 52 LAGRSCS 58


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 1   GLSGKAC 7
           GLS  AC
Sbjct: 350 GLSASAC 356


>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P

Query: 4   GKACSTG 10
           G+AC TG
Sbjct: 114 GEACDTG 120


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 2  LSGKACST 9
          LSG++C +
Sbjct: 52 LSGRSCDS 59


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 1   GLSGKACSTG 10
           GLS   C TG
Sbjct: 248 GLSSAWCFTG 257




39|Sequence|191|200|ACSTGSSESS

 ***** No hits found ******


40|Sequence|196|205|SSESSSSNMA

 ***** No hits found ******


41|Sequence|201|210|SSNMAPFCVL

>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2    SNMAPFCVL 10
            SNM PF V+
Sbjct: 2074 SNMQPFIVM 2082


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    SNMAPFCVL 10
            SNM PF V+
Sbjct: 2074 SNMQPFIVM 2082


>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 3   NMAPFCV 9
           NMAPF +
Sbjct: 800 NMAPFVI 806


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   SSNMAPFCVL 10
           ++N AP C L
Sbjct: 583 AANSAPLCSL 592


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 2   SNMAPFCVL 10
           SN+ PF V+
Sbjct: 311 SNITPFYVI 319


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 3   NMAPFC 8
           NM P+C
Sbjct: 483 NMRPYC 488


>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1   SSNMAPFC 8
           S NM  FC
Sbjct: 196 SVNMTSFC 203


>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate

Query: 3  NMAPFCV 9
          N AP CV
Sbjct: 93 NQAPSCV 99


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 1   SSNMAPFC 8
           SSN+  FC
Sbjct: 460 SSNLCEFC 467


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 3   NMAPFCV 9
           NM+PF +
Sbjct: 801 NMSPFVI 807


>sp|YVAQ_VACCC|UNCHARACTERIZED 8.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  MAPFCVL 10
          M+P+C++
Sbjct: 61 MSPYCLI 67


>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1   SSNMAPFC 8
           S NM  FC
Sbjct: 196 SVNMTTFC 203


>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)

Query: 3  NMAPFCV 9
          NM  FCV
Sbjct: 49 NMRNFCV 55


>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)

Query: 3  NMAPFCV 9
          NM  FCV
Sbjct: 49 NMRNFCV 55


>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 3  NMAPFCV 9
          NM  FCV
Sbjct: 49 NMRNFCV 55


>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)

Query: 3  NMAPFCV 9
          NM  FCV
Sbjct: 49 NMRNFCV 55


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   NMAPFCVL 10
           ++AP CVL
Sbjct: 888 DVAPDCVL 895


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   NMAPFCVL 10
           ++AP CVL
Sbjct: 888 DVAPDCVL 895




42|Sequence|206|215|PFCVLSPVKS

>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 1   PFCVLSPV 8
           PF V+SP+
Sbjct: 186 PFIVISPM 193


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 1   PFCVLSPV 8
           PF V+SP+
Sbjct: 186 PFIVISPM 193


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PFCVLSPV 8
           PF V+SP+
Sbjct: 186 PFIVISPM 193


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   PFCVLSPV 8
           PF V+SP+
Sbjct: 186 PFIVISPM 193


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1   PFCVLSPV 8
           PF V+SP+
Sbjct: 186 PFIVISPM 193


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PFCVLSPVKS 10
           P CVLS V+S
Sbjct: 891 PDCVLSYVES 900


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   PFCVLSPVKS 10
           P CVLS V+S
Sbjct: 891 PDCVLSYVES 900


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 2   FCVLSPV 8
           FC ++PV
Sbjct: 336 FCSIAPV 342


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 2   FCVLSPV 8
           FC ++PV
Sbjct: 336 FCSIAPV 342


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 2   FCVLSPV 8
           FC ++PV
Sbjct: 336 FCSIAPV 342


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 2   FCVLSPV 8
           FC ++PV
Sbjct: 336 FCSIAPV 342


>sp|VL2_HPV03|MINOR capsid protein L2|Human papillomavirus 3

Query: 1   PFCVLSPVKS 10
           PF  LSPV +
Sbjct: 424 PFVPLSPVDT 433


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2   FCVLSP 7
           +C LSP
Sbjct: 799 YCALSP 804


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2   FCVLSP 7
           +C LSP
Sbjct: 799 YCALSP 804


>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain

Query: 3   CVLSPV 8
           CV SP+
Sbjct: 356 CVFSPI 361


>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)

Query: 3   CVLSPVK 9
           C L+P+K
Sbjct: 431 CTLNPIK 437


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2   FCVLSP 7
           FC+ SP
Sbjct: 738 FCLFSP 743


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 2   FCVLSPV 8
           FC L+P+
Sbjct: 309 FCGLAPI 315


>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)

Query: 3   CVLSPV 8
           CV SP+
Sbjct: 356 CVFSPI 361


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2   FCVLSP 7
           FC+ SP
Sbjct: 738 FCLFSP 743


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 2   FCVLSPV 8
           FC L+P+
Sbjct: 309 FCGLAPI 315


>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain

Query: 3   CVLSPV 8
           CV SP+
Sbjct: 356 CVFSPI 361


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2   FCVLSP 7
           FC+ SP
Sbjct: 738 FCLFSP 743


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2   FCVLSP 7
           FC+ SP
Sbjct: 738 FCLFSP 743


>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)

Query: 3   CVLSPV 8
           CV SP+
Sbjct: 356 CVFSPI 361




43|Sequence|211|220|SPVKSPHLRK

>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1    SPVKSPHL 8
            +P+ SPH+
Sbjct: 1559 APINSPHI 1566


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1    SPVKSPHL 8
            +P+ SPH+
Sbjct: 1559 APINSPHI 1566


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1    SPVKSPHL 8
            +P+ SPH+
Sbjct: 1559 APINSPHI 1566


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    SPVKSPHLRK 10
            SPV  P +RK
Sbjct: 1273 SPVSMPVIRK 1282


>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  SPVKSPHL 8
          SP  SPH 
Sbjct: 72 SPACSPHF 79


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 6   PHLRK 10
           PHLRK
Sbjct: 921 PHLRK 925


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 2   PVKSPHLR 9
           PV SPH +
Sbjct: 125 PVSSPHWK 132


>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  SPVKSPHLR 9
          S +KS H R
Sbjct: 30 SEIKSAHFR 38




44|Sequence|216|225|PHLRKASAVI

 ***** No hits found ******


45|Sequence|221|230|ASAVIHDQHK

>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 5   IHDQH 9
           IHDQH
Sbjct: 356 IHDQH 360


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 5   IHDQH 9
           IHDQH
Sbjct: 356 IHDQH 360


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   IHDQH 9
           IHDQH
Sbjct: 356 IHDQH 360


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1    ASAVIHDQH 9
            A  VIH QH
Sbjct: 3133 AEMVIHHQH 3141


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    ASAVIHDQH 9
            A  VIH QH
Sbjct: 3133 AEMVIHHQH 3141


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    ASAVIHDQH 9
            A  VIH QH
Sbjct: 3133 AEMVIHHQH 3141


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    ASAVIHDQH 9
            A  VIH QH
Sbjct: 3133 AEMVIHHQH 3141


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    ASAVIHDQH 9
            A  VIH QH
Sbjct: 3133 AEMVIHHQH 3141


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 5   IHDQHK 10
           +HDQ+K
Sbjct: 246 VHDQYK 251


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 6   HDQHK 10
           HD+HK
Sbjct: 799 HDEHK 803


>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70

Query: 5   IHDQHK 10
           +H+QHK
Sbjct: 166 VHEQHK 171


>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  VIHDQH 9
          VIHD H
Sbjct: 15 VIHDSH 20


>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  VIHDQH 9
          VIHD H
Sbjct: 15 VIHDSH 20


>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53

Query: 5   IHDQHK 10
           IHD HK
Sbjct: 160 IHDGHK 165


>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)

Query: 6  HDQHK 10
          HD+HK
Sbjct: 11 HDRHK 15


>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   VIHDQH 9
           ++HD+H
Sbjct: 389 ILHDRH 394


>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   VIHDQH 9
           ++HD+H
Sbjct: 389 ILHDRH 394




46|Sequence|226|235|HDQHKLSTEE

>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1   HDQHK 5
           HD+HK
Sbjct: 799 HDEHK 803


>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P

Query: 1   HDQHKLS 7
           HD+H L+
Sbjct: 232 HDRHPLT 238


>sp|UL10_HCMVA|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   HDQHKLST 8
           H QHK ST
Sbjct: 167 HTQHKRST 174


>sp|UL10_HCMVM|UNCHARACTERIZED protein UL10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   HDQHKLST 8
           H QHK ST
Sbjct: 166 HTQHKRST 173




47|Sequence|231|240|LSTEETEISP

>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1    LSTEETEI 8
            + TEETEI
Sbjct: 2021 IQTEETEI 2028


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1  LSTEETE 7
          L+TEETE
Sbjct: 89 LNTEETE 95


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1    LSTEETEI 8
            + TEETE+
Sbjct: 2021 IQTEETEV 2028


>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)

Query: 4   EETEISP 10
           +ET+ISP
Sbjct: 357 DETDISP 363


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1    LSTEETE 7
            +STEETE
Sbjct: 2016 ISTEETE 2022




48|Sequence|236|245|TEISPPLVKC

>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P

Query: 1   TEISPPLVKC 10
           TE  PPL KC
Sbjct: 257 TEWDPPLPKC 266


>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)

Query: 2   EISPPLVKC 10
           E++PP  KC
Sbjct: 188 EVTPPXXKC 196


>sp|PG045_VACCT|APOPTOSIS regulator OPG045|Vaccinia virus (strain Tian Tan)

Query: 1   TEISPP 6
           T+ISPP
Sbjct: 187 TDISPP 192


>sp|PG045_VACCP|APOPTOSIS regulator OPG045|Vaccinia virus (strain L-IVP) (VACV)

Query: 1   TEISPP 6
           T+ISPP
Sbjct: 187 TDISPP 192


>sp|PG045_VACCC|APOPTOSIS regulator OPG045|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   TEISPP 6
           T+ISPP
Sbjct: 187 TDISPP 192


>sp|PG045_VACCA|APOPTOSIS regulator OPG045|Vaccinia virus (strain Ankara) (VACV)

Query: 1   TEISPP 6
           T+ISPP
Sbjct: 183 TDISPP 188


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2    EISPPLVKC 10
            E+S  L+KC
Sbjct: 1769 EVSKELIKC 1777


>sp|PG045_VARV|APOPTOSIS regulator OPG045|Variola virus

Query: 1   TEISPP 6
           T+ISPP
Sbjct: 198 TDISPP 203


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 1   TEISPPLVK 9
           +EIS PLV+
Sbjct: 335 SEISNPLVQ 343


>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   TEISPPLVK 9
           +EI PPL++
Sbjct: 205 SEIKPPLIE 213


>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   TEISPPLVK 9
           +EI PPL++
Sbjct: 205 SEIKPPLIE 213


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1   TEISPPLVKC 10
           T + PP +KC
Sbjct: 868 TVVPPPYIKC 877


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 2   EISPPL 7
           EISPP 
Sbjct: 643 EISPPF 648


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2    EISPPLVKC 10
            E+S  LV+C
Sbjct: 1769 EVSKELVRC 1777


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2    EISPPLVKC 10
            E+S  LV+C
Sbjct: 1770 EVSKELVRC 1778


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 3   ISPPLVKC 10
           ++P +VKC
Sbjct: 214 VNPEVVKC 221


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 3   ISPPLVKC 10
           ++P +VKC
Sbjct: 214 VNPEVVKC 221


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1007 TPPLVK 1012


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   EISPPLVKC 10
           EIS P ++C
Sbjct: 389 EISSPGLRC 397


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1005 TPPLVK 1010


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 999  TPPLVK 1004


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1008 TPPLVK 1013


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1002 TPPLVK 1007


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 2  EISPPLVKC 10
          EIS P ++C
Sbjct: 66 EISSPGLRC 74


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1012 TPPLVK 1017


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1016 TPPLVK 1021


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1018 TPPLVK 1023


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1011 TPPLVK 1016


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1010 TPPLVK 1015


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1018 TPPLVK 1023


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1001 TPPLVK 1006


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1001 TPPLVK 1006


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1001 TPPLVK 1006


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1003 TPPLVK 1008


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1005 TPPLVK 1010


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1018 TPPLVK 1023


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1003 TPPLVK 1008


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1007 TPPLVK 1012


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1004 TPPLVK 1009


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1003 TPPLVK 1008


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1001 TPPLVK 1006


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1010 TPPLVK 1015


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1001 TPPLVK 1006


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1016 TPPLVK 1021


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPLVK
Sbjct: 1006 TPPLVK 1011


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2    EISPPLVKC 10
            E+S  L++C
Sbjct: 1770 EVSQELIRC 1778


>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)

Query: 2   EISPPLVKC 10
           +++PP  KC
Sbjct: 188 KVTPPXXKC 196


>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)

Query: 2   EISPPLVKC 10
           +++PP  KC
Sbjct: 188 KVTPPXXKC 196


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 3   ISPPLVKC 10
           + P +VKC
Sbjct: 205 VRPEVVKC 212


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPL+K
Sbjct: 1005 TPPLIK 1010


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4    SPPLVK 9
            +PPL+K
Sbjct: 1007 TPPLIK 1012


>sp|US04_HCMVA|UNCHARACTERIZED protein US4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  TEISPPL 7
          T +SPPL
Sbjct: 43 TAVSPPL 49




49|Sequence|241|250|PLVKCGSAYE

>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 1   PLVKCGS 7
           PLVKC S
Sbjct: 204 PLVKCTS 210


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   PLVKCGSAYE 10
           PLV+CG   E
Sbjct: 309 PLVRCGLVEE 318


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   PLVKCGSAYE 10
           PLV+CG   E
Sbjct: 309 PLVRCGLVEE 318


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1  PLVKCGSA 8
          PL+ CGS 
Sbjct: 89 PLIVCGSG 96


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PLVKCGSA 8
           PL+ CG A
Sbjct: 232 PLLLCGQA 239


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   PLVKC 5
           PL+KC
Sbjct: 448 PLIKC 452


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   PLVKC 5
           PL+KC
Sbjct: 448 PLIKC 452


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   PLVKC 5
           PL+KC
Sbjct: 448 PLIKC 452


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   PLVKC 5
           PL+KC
Sbjct: 448 PLIKC 452


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   PLVKC 5
           PL+KC
Sbjct: 448 PLIKC 452


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   PLVKCGSA 8
           PL+ CG A
Sbjct: 232 PLLLCGQA 239


>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)

Query: 2   LVKCGSA 8
           LV CGS+
Sbjct: 145 LVSCGSS 151


>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   LVKCGSA 8
           LV CGS+
Sbjct: 145 LVSCGSS 151


>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant

Query: 2   LVKCGSA 8
           LV CGS+
Sbjct: 145 LVSCGSS 151


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2   LVKCGS 7
           L+KCG+
Sbjct: 971 LIKCGA 976


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 2   LVKCGSAY 9
           LVK GS+Y
Sbjct: 168 LVKKGSSY 175


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    PLVKCG 6
            PL+ CG
Sbjct: 1373 PLLSCG 1378


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    PLVKCG 6
            PL+ CG
Sbjct: 1373 PLLSCG 1378


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 2    LVKCGSAY 9
            L+KCG  +
Sbjct: 1774 LIKCGMRF 1781




50|Sequence|246|255|GSAYEPENQS

>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 3   AYEPENQ 9
            YEP NQ
Sbjct: 787 GYEPANQ 793


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 2   SAYEPEN 8
           S YEPE+
Sbjct: 125 SIYEPED 131


>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29

Query: 5   EPENQS 10
           EPENQS
Sbjct: 347 EPENQS 352


>sp|VE8E2_HPV29|PROTEIN E8^E2C|Human papillomavirus 29

Query: 5   EPENQS 10
           EPENQS
Sbjct: 147 EPENQS 152


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1   GSAYEPEN 8
           G AY PE+
Sbjct: 806 GYAYHPES 813


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 3   AYEPENQS 10
            Y PENQ+
Sbjct: 648 VYLPENQT 655


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 3   AYEPENQS 10
            Y PENQ+
Sbjct: 648 VYLPENQT 655


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 2    SAYEPEN 8
            ++YEPE+
Sbjct: 1191 ASYEPES 1197


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2    SAYEPEN 8
            ++YEPE+
Sbjct: 1191 ASYEPES 1197


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2    SAYEPEN 8
            ++YEPE+
Sbjct: 1191 ASYEPES 1197


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 2    SAYEPEN 8
            ++YEPE+
Sbjct: 1191 ASYEPES 1197


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 2    SAYEPEN 8
            ++YEPE+
Sbjct: 1191 ASYEPES 1197


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 4   YEPENQS 10
           Y PENQ+
Sbjct: 649 YLPENQT 655


>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain

Query: 2   SAYEPENQ 9
           SA+ P+N+
Sbjct: 133 SAFPPDNE 140


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 4   YEPENQS 10
           Y PENQ+
Sbjct: 649 YLPENQT 655


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 4   YEPENQS 10
           Y PENQ+
Sbjct: 647 YLPENQT 653


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 4   YEPENQS 10
           Y PENQ+
Sbjct: 649 YLPENQT 655


>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   SAYEPE 7
           SA+EPE
Sbjct: 187 SAFEPE 192


>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   SAYEPE 7
           SA+EPE
Sbjct: 187 SAFEPE 192


>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   SAYEPE 7
           SA+EPE
Sbjct: 187 SAFEPE 192




51|Sequence|251|260|PENQSKDFLN

>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 2   ENQSKDFL 9
           EN+ +DFL
Sbjct: 94  ENEGEDFL 101


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1   PENQSK 6
           PENQ+K
Sbjct: 651 PENQTK 656


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1   PENQSK 6
           PENQ+K
Sbjct: 651 PENQTK 656


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1   PENQSK 6
           PENQ+K
Sbjct: 651 PENQTK 656


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1   PENQSK 6
           PENQ+K
Sbjct: 649 PENQTK 654


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1   PENQSK 6
           PENQ+K
Sbjct: 651 PENQTK 656


>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /

Query: 1  PENQSKDFL 9
          PEN+ +D+ 
Sbjct: 53 PENELRDYF 61


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 2  ENQSKDFLN 10
          EN+  DF N
Sbjct: 30 ENEITDFFN 38


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 2  ENQSKDFLN 10
          EN+  DF N
Sbjct: 30 ENEITDFFN 38


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 1   PENQSK 6
           PENQ+K
Sbjct: 651 PENQTK 656


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1    PENQSKDFLN 10
            P   S+DFLN
Sbjct: 1290 PAYISQDFLN 1299


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1    PENQSKDFLN 10
            P   S+DFLN
Sbjct: 1290 PAYISQDFLN 1299




52|Sequence|256|265|KDFLNKTFSD

>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 2   DFLNKTFSD 10
           +FLNKT+S+
Sbjct: 440 EFLNKTYSN 448


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2   DFLNKTFSD 10
           +FLNKT+S+
Sbjct: 440 EFLNKTYSN 448


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 2   DFLNKTFSD 10
           +FLNKT+S+
Sbjct: 440 EFLNKTYSN 448


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 2   DFLNKTFS 9
           +FLNKT+S
Sbjct: 440 EFLNKTYS 447


>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   KDFLNKTFS 9
           K+F NK F+
Sbjct: 158 KNFFNKMFT 166


>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   KDFLNKTFS 9
           K+F NK F+
Sbjct: 158 KNFFNKMFT 166


>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   KDFLNKTFS 9
           K+F NK F+
Sbjct: 158 KNFFNKMFT 166


>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   KDFLNKTFS 9
           K+F NK F+
Sbjct: 158 KNFFNKMFT 166


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 2   DFLNKTFSD 10
           DF  KTF D
Sbjct: 451 DFCKKTFKD 459


>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1   KDFLNKTFS 9
           K+F NK F+
Sbjct: 158 KNFFNKLFT 166


>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)

Query: 2  DFLNKTFS 9
          +F+N+TFS
Sbjct: 63 NFINRTFS 70


>sp|PG172_VARV|PROTEIN A43|Variola virus

Query: 2  DFLNKTFS 9
          +F+N+TFS
Sbjct: 63 NFINRTFS 70


>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  DFLNKTFS 9
          +F+N+TFS
Sbjct: 63 NFINRTFS 70


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 2   DFLNKTFSD 10
           +FLNK +S+
Sbjct: 440 EFLNKVYSE 448


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 2   DFLNKTFS 9
           +FLNKT++
Sbjct: 440 EFLNKTYT 447


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2   DFLNKTFSD 10
           DF++KT  D
Sbjct: 629 DFVDKTLPD 637


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2   DFLNKTFSD 10
           DF++KT  D
Sbjct: 629 DFVDKTLPD 637


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2   DFLNKTFSD 10
           DF++KT  D
Sbjct: 629 DFVDKTLPD 637


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 2   DFLNKTFSD 10
           DF++KT  D
Sbjct: 629 DFVDKTLPD 637


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   DFLNKTFS 9
           DF NKT S
Sbjct: 483 DFTNKTTS 490


>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus

Query: 1   KDFLNKTFSD 10
           + FL+KTF D
Sbjct: 309 EKFLHKTFID 318


>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate

Query: 1   KDFLNKTFSD 10
           + FL+KTF D
Sbjct: 309 EKFLHKTFID 318


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 2   DFLNKTFSD 10
           +F N  FSD
Sbjct: 156 NFTNPAFSD 164


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 2   DFLNKTFS 9
           +FLN T+S
Sbjct: 440 EFLNNTYS 447


>sp|SPI1_CWPXB|SERINE proteinase inhibitor 1|Cowpox virus (strain Brighton Red)

Query: 3   FLNKTFSD 10
           FL+KTF D
Sbjct: 294 FLHKTFID 301


>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65

Query: 3   FLNKTFS 9
           F+N TFS
Sbjct: 215 FVNATFS 221


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 3   FLNKTFSD 10
           F N TFSD
Sbjct: 409 FTNLTFSD 416


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   FLNKTFSD 10
           F N TFSD
Sbjct: 409 FTNLTFSD 416


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 3   FLNKTFSD 10
           F N TFSD
Sbjct: 409 FTNLTFSD 416


>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4

Query: 3   FLNKTFS 9
           F+N TFS
Sbjct: 218 FVNATFS 224


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 2    DFLNKTFSD 10
            D+LN  F D
Sbjct: 1027 DWLNALFGD 1035


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   KDFLNKT 7
           K F+NKT
Sbjct: 362 KQFVNKT 368


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 2   DFLNKTF 8
           DF N+TF
Sbjct: 180 DFFNQTF 186


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   DFLNKTF 8
           DF N+TF
Sbjct: 180 DFFNQTF 186


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    KDFLNK 6
            KDFLN+
Sbjct: 1466 KDFLNE 1471


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1    KDFLNK 6
            KDFLN+
Sbjct: 1466 KDFLNE 1471


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    KDFLNK 6
            KDFLN+
Sbjct: 1466 KDFLNE 1471




53|Sequence|261|270|KTFSDPHGRK

>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 419 TFKNPHAKK 427


>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 288 TFKNPHAKK 296


>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 239 TFKNPHAKK 247


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 3   FSDPHGR 9
            +DPHGR
Sbjct: 429 LADPHGR 435


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 239 TFKNPHAKK 247


>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 239 TFKNPHAKK 247


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   TFSDPHGRK 10
           TF +PH +K
Sbjct: 519 TFKNPHAKK 527


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1    KTFSDPHGR 9
            K F+DP GR
Sbjct: 1348 KPFADPRGR 1356


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2    TFSDPHGRK 10
            ++SDPH  +
Sbjct: 1981 SYSDPHSHE 1989


>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3   FSDPHG 8
           F DPHG
Sbjct: 203 FDDPHG 208


>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3   FSDPHG 8
           F DPHG
Sbjct: 202 FDDPHG 207


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 1   KTFSDPHGRK 10
           K   D HGRK
Sbjct: 460 KRLLDTHGRK 469


>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate

Query: 1   KTFSDPHGRK 10
           K F  PHG K
Sbjct: 186 KDFYIPHGNK 195


>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 1   KTFSDPHGRK 10
           K F  PHG K
Sbjct: 186 KDFYIPHGNK 195


>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)

Query: 1   KTFSDPHGRK 10
           K F  PHG K
Sbjct: 186 KDFYIPHGNK 195


>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 1   KTFSDPHGRK 10
           K F  PHG K
Sbjct: 186 KDFYIPHGNK 195


>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3   FSDPHG 8
           F DPHG
Sbjct: 203 FDDPHG 208


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 1   KTFSDPHGRK 10
           K   D HGRK
Sbjct: 459 KKLFDIHGRK 468


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   TFSDPHGRK 10
           TF  PH ++
Sbjct: 518 TFKVPHAKR 526


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   TFSDPHGRK 10
           TF  PH ++
Sbjct: 518 TFKVPHAKR 526


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   FSDPHGRK 10
           FS P GR+
Sbjct: 630 FSQPSGRE 637


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 3   FSDPHGRK 10
           FS P GR+
Sbjct: 630 FSQPSGRE 637


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   TFSDPHGRK 10
           TF  PH ++
Sbjct: 518 TFKVPHAKR 526


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   TFSDPHGRK 10
           TF  PH ++
Sbjct: 518 TFKVPHAKR 526


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   TFSDPHGRK 10
           TF  PH ++
Sbjct: 518 TFKVPHAKR 526


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1   KTFSDPHGRK 10
           +   DP GRK
Sbjct: 94  QCLGDPSGRK 103


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 3   FSDPHGRK 10
           FS P GR+
Sbjct: 630 FSQPSGRE 637


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   FSDPHGRK 10
           FS P GR+
Sbjct: 630 FSQPSGRE 637


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 5   DPHGRK 10
           D HGRK
Sbjct: 464 DTHGRK 469


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3    FSDPHGR 9
            F DP G+
Sbjct: 1334 FKDPQGK 1340


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 5   DPHGRK 10
           DP+GR+
Sbjct: 488 DPYGRQ 493


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 5   DPHGRK 10
           DP+GR+
Sbjct: 487 DPYGRQ 492


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 5   DPHGRK 10
           DP+GR+
Sbjct: 487 DPYGRQ 492


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 5   DPHG 8
           DPHG
Sbjct: 168 DPHG 171


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 5   DPHG 8
           DPHG
Sbjct: 168 DPHG 171


>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related

Query: 2  TFSDPH 7
          TFSDP+
Sbjct: 60 TFSDPN 65


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1    KTFSDPHGR 9
            KTF   +GR
Sbjct: 1884 KTFDKDYGR 1892




54|Sequence|266|275|PHGRKVEKTT

>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 1   PHGRKVEKTT 10
           P+G+KV + T
Sbjct: 98  PYGKKVGRNT 107


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1   PHGRKVE 7
           P+GRKV+
Sbjct: 402 PNGRKVD 408


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 2   HGRKVEKTT 10
           HGR V KT+
Sbjct: 183 HGRSVTKTS 191


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 2   HGRKVEKTT 10
           HGR V KT+
Sbjct: 183 HGRLVTKTS 191


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 3   GRKVEKTT 10
           GR  EKTT
Sbjct: 429 GRPREKTT 436


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 2   HGRKVEKTT 10
           HGR V KT+
Sbjct: 183 HGRLVIKTS 191




55|Sequence|271|280|VEKTTPDCQL

>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           V+   PDC+L
Sbjct: 325 VQNANPDCKL 334


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 323 IQNANPDCKL 332


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 325 IQNANPDCKL 334


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 326 IQNANPDCKL 335


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 320 IQNANPDCKL 329


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 320 IQNANPDCKL 329


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 320 IQNANPDCKL 329


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 325 IQNANPDCKL 334


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 325 IQNANPDCKL 334


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 323 IQNANPDCKL 332


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 320 IQNANPDCKL 329


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 320 IQNANPDCKL 329


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 326 IQNANPDCKL 335


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    VEKTTPDCQ 9
            +E+TTP  Q
Sbjct: 2436 LERTTPQMQ 2444


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 2    EKTTPDC 8
            E T PDC
Sbjct: 1210 EYTPPDC 1216


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 325 IQNANPDCKL 334


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   KTTPDCQL 10
           ++ PDC+L
Sbjct: 326 QSNPDCKL 333


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   VEKTTPDCQL 10
           ++   PDC+L
Sbjct: 320 IQNANPDCKL 329


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 3   KTTPDCQL 10
           ++ PDC+L
Sbjct: 326 QSNPDCKL 333


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 6    PDCQ 9
            PDCQ
Sbjct: 1960 PDCQ 1963


>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 2   EKTTPDCQL 10
           E+ TP C L
Sbjct: 524 EEITPHCAL 532


>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 4   TTPDC 8
           +TPDC
Sbjct: 310 STPDC 314


>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 3   KTTPDC 8
           KTT DC
Sbjct: 342 KTTSDC 347


>sp|TRM2_HHV11|TRIPARTITE terminase subunit 2|Human herpesvirus 1 (strain 17)

Query: 4  TTPDCQL 10
          T PDC L
Sbjct: 16 TIPDCAL 22


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2   EKTTPDCQL 10
           E+ TP C L
Sbjct: 523 EEITPHCAL 531


>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P

Query: 1   VEKTTPDC 8
           +   TPDC
Sbjct: 272 IRALTPDC 279


>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 5   TPDC 8
           TPDC
Sbjct: 101 TPDC 104


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 2   EKTTPDC 8
           E+T+P+C
Sbjct: 525 EQTSPNC 531


>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French

Query: 3  KTTPDCQ 9
          +  PDCQ
Sbjct: 18 RRIPDCQ 24


>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3  KTTPDCQ 9
          +  PDCQ
Sbjct: 18 RRIPDCQ 24




56|Sequence|276|285|PDCQLRAFHL

>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    PDCQLRAFH 9
            P CQ+ AFH
Sbjct: 1235 PSCQISAFH 1243


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    PDCQLRAFH 9
            P CQ+ AFH
Sbjct: 1235 PSCQISAFH 1243


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    PDCQLRAFH 9
            P CQ+ AFH
Sbjct: 1235 PSCQISAFH 1243


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    PDCQLRAFH 9
            P CQ+ AFH
Sbjct: 1235 PSCQISAFH 1243


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1    PDCQLRAFH 9
            P CQ+ AFH
Sbjct: 1233 PSCQISAFH 1241


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1    PDCQLRAFH 9
            P CQ+ AFH
Sbjct: 1235 PSCQISAFH 1243


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1    PDCQLRAFH 9
            P CQ+ A+H
Sbjct: 1250 PSCQISAYH 1258


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1    PDCQLRAFH 9
            P CQ+ A+H
Sbjct: 1250 PSCQISAYH 1258


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1    PDCQLRAFH 9
            P CQ  A+H
Sbjct: 1249 PSCQFSAYH 1257


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 2   DCQLRAFH 9
           DC L+ FH
Sbjct: 318 DCILKLFH 325


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 2   DCQLRAFH 9
           DC L+ FH
Sbjct: 318 DCILKLFH 325


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 2   DCQLRAFH 9
           DC L+ FH
Sbjct: 318 DCILKLFH 325


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1   PDCQLRAFHL 10
           PD +LRA  +
Sbjct: 317 PDARLRALEV 326


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2    DCQLRAFH 9
            + Q+R FH
Sbjct: 2372 EAQIRVFH 2379


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1   PDCQLRA 7
           P C++RA
Sbjct: 569 PPCRIRA 575


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1   PDCQLRA 7
           P C++RA
Sbjct: 569 PPCRIRA 575




57|Sequence|281|290|RAFHLQSSAA

>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1   RAFHLQS 7
           + FHLQS
Sbjct: 113 QKFHLQS 119


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   RAFHLQS 7
           + FHLQS
Sbjct: 113 QKFHLQS 119




58|Sequence|286|295|QSSAAESKPE

 ***** No hits found ******


59|Sequence|291|300|ESKPEEQVSG

>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    KPEEQVSG 10
            KP+EQ+ G
Sbjct: 6989 KPKEQIDG 6996


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    KPEEQVSG 10
            KP EQ+ G
Sbjct: 7012 KPREQIDG 7019


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2    SKPEEQVSG 10
            +KPEE++S 
Sbjct: 2397 AKPEEKLSA 2405


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    SKPEEQVSG 10
            +KPEE++S 
Sbjct: 2397 AKPEEKLSA 2405


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 4   PEEQVSG 10
           PE QVSG
Sbjct: 145 PESQVSG 151




60|Sequence|296|305|EQVSGLNRTS

 ***** No hits found ******


61|Sequence|301|310|LNRTSSQGPE

>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 1   LNRTSSQGPE 10
           LNRT    PE
Sbjct: 600 LNRTIKLDPE 609




62|Sequence|306|315|SQGPEERSEY

>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)

Query: 3   GPEERSEY 10
           GPE  SEY
Sbjct: 149 GPESESEY 156


>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   GPEERSEY 10
           GPE  SEY
Sbjct: 152 GPENESEY 159


>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)

Query: 3   GPEERSEY 10
           GPE  SEY
Sbjct: 152 GPENESEY 159


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1   SQGPEERSE 9
           ++GPE+R E
Sbjct: 467 TRGPEDRKE 475


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1    SQGPEE 6
            +QGPEE
Sbjct: 1506 TQGPEE 1511


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    SQGPEE 6
            +QGPEE
Sbjct: 1513 AQGPEE 1518


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    SQGPEE 6
            +QGPEE
Sbjct: 1513 AQGPEE 1518


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1    SQGPEE 6
            +QGPEE
Sbjct: 1509 AQGPEE 1514


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1    SQGPEE 6
            +QGPEE
Sbjct: 1520 TQGPEE 1525


>sp|UL130_HCMVM|ENVELOPE glycoprotein UL130|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  SQGPEERSE 9
          S GPE R+E
Sbjct: 78 STGPECRNE 86


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 3    GPEERSEY 10
            GPE  S+Y
Sbjct: 3387 GPERYSDY 3394


>sp|UL130_HCMVA|UNCHARACTERIZED protein UL130|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  SQGPEERSE 9
          S GPE R+E
Sbjct: 78 STGPECRNE 86


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  SQGPEERSE 9
          + GPE R+E
Sbjct: 63 AAGPETRNE 71


>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14

Query: 2  QGPEERSEY 10
          +GP  +S Y
Sbjct: 13 EGPSPKSSY 21


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 1   SQGPEER 7
           +QGP++R
Sbjct: 718 NQGPQDR 724




63|Sequence|311|320|ERSEYLKKVK

 ***** No hits found ******


64|Sequence|316|325|LKKVKSILNI

>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   LKKVKSILNI 10
           LKKVKS+L +
Sbjct: 255 LKKVKSVLTM 264


>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)

Query: 1   LKKVKSILNI 10
           LKK+KS+L +
Sbjct: 255 LKKIKSVLTM 264


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    LKKVKSILNI 10
            LKK+K  LN+
Sbjct: 3954 LKKLKKSLNV 3963


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    LKKVKSILNI 10
            LKK+K  LN+
Sbjct: 3977 LKKLKKSLNV 3986


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    LKKVKSILNI 10
            LKK+K  LN+
Sbjct: 3954 LKKLKKSLNV 3963


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    LKKVKSILNI 10
            LKK+K  LN+
Sbjct: 3977 LKKLKKSLNV 3986


>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 1  LKKVKSILNI 10
          LKK+ + LNI
Sbjct: 60 LKKITTALNI 69




65|Sequence|321|330|SILNIVKEGQ

>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 1   SILNIVKEG 9
           SI+N++K G
Sbjct: 191 SIVNVIKNG 199


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1   SILNIVKEG 9
           S +NI KEG
Sbjct: 175 SGINITKEG 183


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    SILNIVKEGQ 10
            SIL + K+GQ
Sbjct: 1462 SILMLDKQGQ 1471


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    SILNIVKEGQ 10
            SIL + K+GQ
Sbjct: 1462 SILMLDKQGQ 1471


>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SILNIVKEG 9
           S +NI KEG
Sbjct: 123 SDINISKEG 131




66|Sequence|326|335|VKEGQISLLP

>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain

Query: 1  VKEGQISLLP 10
          +KEG  +L P
Sbjct: 8  IKEGTHTLFP 17


>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United

Query: 4  GQISLLP 10
          GQ+++LP
Sbjct: 16 GQLTILP 22


>sp|UL108_HCMVA|UNCHARACTERIZED protein UL108|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   KEGQISLL 9
           K+GQIS+ 
Sbjct: 98  KKGQISIF 105


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    VKEGQIS 7
            +KEGQI+
Sbjct: 7060 LKEGQIN 7066


>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)

Query: 2   KEGQISLLP 10
           K  Q+SLLP
Sbjct: 100 KGDQLSLLP 108


>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)

Query: 2   KEGQISLLP 10
           K  Q+SLLP
Sbjct: 100 KGDQLSLLP 108




67|Sequence|331|340|ISLLPHLAAD

>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus

Query: 2  SLLPHLAAD 10
          ++LPHL  D
Sbjct: 25 TVLPHLCLD 33


>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate

Query: 2  SLLPHLAAD 10
          ++LPHL  D
Sbjct: 25 TVLPHLCLD 33


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 2  SLLPHLAAD 10
          ++LPHL  D
Sbjct: 25 TVLPHLCLD 33


>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)

Query: 2  SLLPHLAAD 10
          ++LPHL  D
Sbjct: 25 TVLPHLCLD 33


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   SLLPHLAAD 10
           ++LP LAAD
Sbjct: 508 AVLPPLAAD 516


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 1   ISLLPHLAAD 10
           + LLPHL  +
Sbjct: 634 VGLLPHLKEE 643


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 1   ISLLPHLAAD 10
           + LLPHL  +
Sbjct: 634 VGLLPHLKEE 643


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5   PHLAAD 10
           PHLAA+
Sbjct: 418 PHLAAN 423


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 5   PHLAAD 10
           PHLAA+
Sbjct: 418 PHLAAN 423


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 1   ISLLPHL 7
           + LLPHL
Sbjct: 629 VGLLPHL 635


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 1   ISLLPHL 7
           + LLPHL
Sbjct: 634 VGLLPHL 640


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1   ISLLPHL 7
           ISLL HL
Sbjct: 813 ISLLKHL 819


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 3   LLPHLAAD 10
           +L H+AAD
Sbjct: 411 ILTHIAAD 418




68|Sequence|336|345|HLAADNLDKI

>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 1    HLAADNLDKI 10
            H AA +LDK+
Sbjct: 1057 HAAAPHLDKV 1066


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 1    HLAADNLDKI 10
            H AA +LDK+
Sbjct: 1057 HAAAPHLDKV 1066


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 1    HLAADNLDKI 10
            H AA +LDK+
Sbjct: 1056 HAAAPHLDKV 1065


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1   HLAADNLD 8
           HL A++LD
Sbjct: 779 HLQANDLD 786


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    DNLDKI 10
            DNLD+I
Sbjct: 2094 DNLDQI 2099


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    DNLDKI 10
            DNLD+I
Sbjct: 2096 DNLDQI 2101


>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV

Query: 4   ADNLDK 9
           ADN DK
Sbjct: 288 ADNFDK 293




69|Sequence|341|350|NLDKIHDENG

>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 5   IHDENG 10
           IHDENG
Sbjct: 205 IHDENG 210


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 2    LDKIHDENG 10
            LD IH +NG
Sbjct: 1999 LDNIHMQNG 2007


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2   LDKIHDEN 9
           LD IH EN
Sbjct: 326 LDDIHQEN 333


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2   LDKIHDEN 9
           LD IH EN
Sbjct: 326 LDDIHQEN 333


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2    LDKIHDENG 10
            LD IH  NG
Sbjct: 2000 LDNIHMPNG 2008


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2    LDKIHDENG 10
            LD IH  NG
Sbjct: 2000 LDNIHMPNG 2008


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2    LDKIHDENG 10
            LD IH  NG
Sbjct: 2000 LDNIHMPNG 2008


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2    LDKIHDENG 10
            LD IH  NG
Sbjct: 2000 LDNIHMPNG 2008


>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)

Query: 1  NLDKIHD 7
          N+DK+HD
Sbjct: 26 NVDKMHD 32


>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)

Query: 1  NLDKIHD 7
          N+DK+HD
Sbjct: 26 NVDKMHD 32


>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  NLDKIHD 7
          N+DK+HD
Sbjct: 26 NVDKMHD 32


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2    LDKIHDENG 10
            LD IH  NG
Sbjct: 1999 LDNIHLPNG 2007


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2    LDKIHDENG 10
            LD IH  NG
Sbjct: 1999 LDNIHLPNG 2007


>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)

Query: 1  NLDKIHD 7
          N+DK+HD
Sbjct: 26 NVDKMHD 32


>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus

Query: 1  NLDKIHD 7
          N+DK+HD
Sbjct: 26 NVDKMHD 32


>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate

Query: 1  NLDKIHD 7
          N+DK+HD
Sbjct: 26 NVDKMHD 32


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2    LDKIHDENG 10
            +DK+  ENG
Sbjct: 2240 IDKVEFENG 2248


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    LDKIHDENG 10
            +DK+  ENG
Sbjct: 2240 IDKVEFENG 2248


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1    NLDKIHDEN 9
            N+D+IH +N
Sbjct: 1652 NIDRIHIKN 1660


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1    NLDKIHDEN 9
            N+D+IH +N
Sbjct: 1652 NIDRIHIKN 1660


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 2   LDKIHDENG 10
           +DK ++ENG
Sbjct: 146 VDKQYEENG 154


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 2   LDKIHDEN 9
           L +IHD N
Sbjct: 258 LPRIHDPN 265


>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   LDKIHD 7
           LDK+H+
Sbjct: 133 LDKVHE 138


>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LDKIHD 7
           LDK+H+
Sbjct: 133 LDKVHE 138


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LDKIHD 7
           LDK+H+
Sbjct: 133 LDKVHE 138


>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)

Query: 4 KIHDE 8
         K+HDE
Sbjct: 5 KVHDE 9


>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P

Query: 3   DKIHDE 8
           DK HD+
Sbjct: 531 DKFHDD 536


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 6   HDENG 10
           HD+NG
Sbjct: 355 HDKNG 359




70|Sequence|346|355|HDENGNNLLH

>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 3   ENGNNLLH 10
           ENGN LLH
Sbjct: 488 ENGNQLLH 495


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   ENGNNLLH 10
           ENG+ LLH
Sbjct: 488 ENGDQLLH 495


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2   DENGNNL 8
           DEN NNL
Sbjct: 552 DENDNNL 558


Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMMH 992


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2   DENGNNL 8
           DEN NNL
Sbjct: 552 DENDNNL 558


Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2   DENGNNL 8
           DEN NNL
Sbjct: 552 DENDNNL 558


>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 1   HDENG 5
           HDENG
Sbjct: 206 HDENG 210


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2    DENGNNLL 9
            DEN NNL+
Sbjct: 2692 DENYNNLV 2699


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2    DENGNNLL 9
            DEN NNL+
Sbjct: 2712 DENYNNLV 2719


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2    DENGNNLL 9
            DEN NNL+
Sbjct: 2742 DENYNNLV 2749


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    DENGNNLL 9
            DEN NNL+
Sbjct: 2692 DENYNNLV 2699


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    DENGNNLL 9
            DEN NNL+
Sbjct: 2712 DENYNNLV 2719


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    DENGNNLL 9
            DEN NNL+
Sbjct: 2742 DENYNNLV 2749


>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8

Query: 1   HDENGNNLLH 10
           HD +G+  LH
Sbjct: 496 HDNSGDFFLH 505


>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  DENGNNLLH 10
          D  GNN LH
Sbjct: 57 DRRGNNALH 65


>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47

Query: 1   HDENGNNLLH 10
           HD +G+  LH
Sbjct: 496 HDNSGDFYLH 505


>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12

Query: 1   HDENGNNLLH 10
           HD +G+  LH
Sbjct: 496 HDNSGDFYLH 505


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 1   HDENGNNLLH 10
           HD  G+  LH
Sbjct: 496 HDSTGDFYLH 505


>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 2  DENGNNLLH 10
          D  GNN LH
Sbjct: 39 DRRGNNALH 47


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 1   HDENGNNLLH 10
           HD  G+  LH
Sbjct: 496 HDNTGDFYLH 505


>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36

Query: 1   HDENGNNLLH 10
           HD  G+  LH
Sbjct: 496 HDNTGDFYLH 505


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5   GNNLLH 10
           GNN LH
Sbjct: 575 GNNTLH 580


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 5   GNNLLH 10
           GNN LH
Sbjct: 575 GNNTLH 580


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5   GNNLLH 10
           GNN LH
Sbjct: 575 GNNTLH 580


>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   HDENGNNL 8
           + E GNNL
Sbjct: 190 YKETGNNL 197


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 2   DENGNNL 8
           D NG+NL
Sbjct: 552 DTNGSNL 558


Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55

Query: 1  HDENGNNL 8
          ++EN NNL
Sbjct: 19 YEENSNNL 26


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    HDENGNNLLH 10
            HD +GN + +
Sbjct: 2797 HDASGNRVYY 2806


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 1   HDENGN 6
           HD+NG+
Sbjct: 355 HDKNGS 360


>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain

Query: 1  HDENG 5
          H+ENG
Sbjct: 12 HEENG 16


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 1  HDENG 5
          H+ENG
Sbjct: 12 HEENG 16


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1   HDENGNNLLH 10
           H+ NG  ++H
Sbjct: 983 HEVNGTWMIH 992


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 3  ENGNNLL 9
          +NG+N+L
Sbjct: 79 DNGSNML 85


>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)

Query: 3  ENGNNLL 9
          +NG+N+L
Sbjct: 79 DNGSNML 85




71|Sequence|351|360|NNLLHIAASQ

>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1    NNLLHIAASQ 10
            N+LLH   SQ
Sbjct: 1476 NDLLHAVDSQ 1485


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1    NNLLHIAAS 9
            NN+LH+  S
Sbjct: 2715 NNILHMVNS 2723


>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   NNLLHIA 7
           +NLLH A
Sbjct: 98  DNLLHFA 104


>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   NNLLHIA 7
           +NLLH A
Sbjct: 98  DNLLHFA 104




72|Sequence|356|365|IAASQGHAEC

>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)

Query: 3   ASQGHAEC 10
           +S GHA C
Sbjct: 181 SSNGHATC 188


>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)

Query: 1   IAASQGHAE 9
           ++ S+GHAE
Sbjct: 770 LSGSRGHAE 778


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   AASQGHAEC 10
           A SQG  EC
Sbjct: 175 ANSQGPGEC 183


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 2   AASQGHAE 9
           + S+GHAE
Sbjct: 776 SGSRGHAE 783


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 2   AASQGHAE 9
           + S+GHAE
Sbjct: 779 SGSRGHAE 786


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 3   ASQGHAE 9
            S+GHAE
Sbjct: 765 GSRGHAE 771


>sp|UL33_HCMVA|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain AD169)

Query: 4   SQGHAEC 10
           + GHA C
Sbjct: 182 TNGHATC 188


>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)

Query: 6   GHAEC 10
           GH EC
Sbjct: 245 GHEEC 249




73|Sequence|361|370|GHAECLQHLT

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3852 CLQHL 3856


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3890 CLQHL 3894


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3910 CLQHL 3914


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3940 CLQHL 3944


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3852 CLQHL 3856


Query: 1    GHAECLQH 8
            G A CL+H
Sbjct: 6374 GGAVCLKH 6381


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3890 CLQHL 3894


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3910 CLQHL 3914


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5    CLQHL 9
            CLQHL
Sbjct: 3940 CLQHL 3944


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 3   AECLQHL 9
           A CL+HL
Sbjct: 133 AACLEHL 139


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   AECLQHL 9
           A CL+HL
Sbjct: 133 AACLEHL 139


>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)

Query: 4   ECLQHLT 10
           EC+QH +
Sbjct: 127 ECIQHCS 133


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    ECLQHL 9
            EC QHL
Sbjct: 1710 ECSQHL 1715


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    ECLQHL 9
            EC QHL
Sbjct: 1710 ECSQHL 1715


>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)

Query: 2  HAECL 6
          HAECL
Sbjct: 77 HAECL 81


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 2  HAECLQH 8
          HA+CL++
Sbjct: 42 HAKCLEN 48


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    ECLQHL 9
            EC QHL
Sbjct: 1710 ECSQHL 1715


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 2   HAECLQHLT 10
           H ECL  L+
Sbjct: 116 HKECLLRLS 124


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 4   ECLQHL 9
           EC QHL
Sbjct: 111 ECKQHL 116


>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Dumas)

Query: 1  GHAECLQ 7
          GHA C++
Sbjct: 57 GHAGCIE 63


>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka

Query: 1  GHAECLQ 7
          GHA C++
Sbjct: 57 GHAGCIE 63


>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3   AECLQHL 9
           A CL HL
Sbjct: 133 AACLAHL 139


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 2   HAECLQHLT 10
           H +CL H T
Sbjct: 477 HYDCLIHST 485


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 2   HAECLQHL 9
           HAE L H+
Sbjct: 564 HAEMLPHM 571


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   HAECLQHL 9
           HAE L H+
Sbjct: 564 HAEMLPHM 571


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 1   GHAECLQHL 9
           GHA   +HL
Sbjct: 93  GHATLREHL 101


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 1   GHAECLQHL 9
           GHA   +HL
Sbjct: 93  GHATLREHL 101


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 1   GHAECLQHL 9
           GHA   +HL
Sbjct: 92  GHATLREHL 100


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 1   GHAECLQHL 9
           GHA   +HL
Sbjct: 93  GHATLREHL 101


>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)

Query: 1   GHAECL 6
           GH EC 
Sbjct: 245 GHEECF 250


>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  GHAECLQ 7
          GH +C+Q
Sbjct: 63 GHDKCMQ 69




74|Sequence|366|375|LQHLTSLMGE

>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 2    QHLTSLMG 9
             HLTS+MG
Sbjct: 1995 HHLTSVMG 2002


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 2    QHLTSLMG 9
             HLTS+MG
Sbjct: 1995 HHLTSVMG 2002


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   LQHLTSLMGE 10
           L HL SL GE
Sbjct: 510 LLHLNSLFGE 519


>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   LQHLTSLMGE 10
           L HL SL GE
Sbjct: 508 LLHLNSLFGE 517


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 1   LQHLTSLMGE 10
           L HL SL GE
Sbjct: 510 LLHLNSLFGE 519


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1  LQHLTSLMGE 10
          L+HLTS   E
Sbjct: 77 LKHLTSFKKE 86


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2    QHLTSLM 8
            QHL SLM
Sbjct: 2209 QHLHSLM 2215


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2    QHLTSLM 8
            QHL SLM
Sbjct: 2209 QHLHSLM 2215


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2    QHLTSLM 8
            QHL SLM
Sbjct: 2209 QHLHSLM 2215


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2    QHLTSLM 8
            QHL SLM
Sbjct: 2209 QHLHSLM 2215


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2    QHLTSLM 8
            QHL SLM
Sbjct: 2209 QHLHSLM 2215


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   QHLTSLMGE 10
           +H+ + MGE
Sbjct: 187 EHMVAAMGE 195


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 2   QHLTSLMGE 10
           QH+ S+M E
Sbjct: 135 QHVRSMMNE 143


>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993

Query: 1   LQHLTSLMG 9
           ++H+ S+MG
Sbjct: 451 IEHIDSVMG 459


>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 1   LQHLTSLMG 9
           ++H+ S+MG
Sbjct: 451 IEHIDSVMG 459


>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong

Query: 1   LQHLTSLMG 9
           ++H+ S+MG
Sbjct: 451 IEHIDSVMG 459


>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980

Query: 1   LQHLTSLMG 9
           ++H+ S+MG
Sbjct: 451 IEHIDSVMG 459


>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979

Query: 1   LQHLTSLMG 9
           ++H+ S+MG
Sbjct: 451 IEHIDSVMG 459


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 1   LQHLTSLMG 9
           ++H+ S+MG
Sbjct: 451 IEHIDSVMG 459




75|Sequence|371|380|SLMGEDCLNE

>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 6   DCLNE 10
           DCLNE
Sbjct: 362 DCLNE 366


>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)

Query: 1   SLMGEDC 7
           +L+G DC
Sbjct: 377 ALLGRDC 383


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 1   SLMGEDCL 8
           SL+GE C+
Sbjct: 351 SLVGERCV 358


>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)

Query: 4   GEDCLNE 10
           GED LN+
Sbjct: 334 GEDVLND 340


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 6   DCLNE 10
           DCLNE
Sbjct: 205 DCLNE 209


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 4   GEDCLNE 10
           GED LN+
Sbjct: 337 GEDILND 343


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3   MGEDC 7
           +GEDC
Sbjct: 160 VGEDC 164


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 4    GEDCL 8
            G+DCL
Sbjct: 1553 GDDCL 1557




76|Sequence|376|385|DCLNERNTEK

>sp|VPU_HV1EL|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1  DCLNERNTEK 10
          DCL +R TE+
Sbjct: 40 DCLLDRITER 49


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1   DCLNERNTE 9
           DC NE   E
Sbjct: 269 DCFNENELE 277


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1   DCLNERNTEK 10
           +C++E +TE+
Sbjct: 984 ECISETSTEQ 993


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 1   DCLNERNTEK 10
           +C++E +TE+
Sbjct: 984 ECISETSTEQ 993


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 2   CLNERN 7
           CL ERN
Sbjct: 407 CLEERN 412


>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2

Query: 2   CLNERNTEK 10
           CL ERN ++
Sbjct: 438 CLEERNLKE 446




77|Sequence|381|390|RNTEKLTPAG

>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 1  RNTEKLTPAG 10
          RN E LTP G
Sbjct: 74 RNNEGLTPLG 83


>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   RNTEKLTPAG 10
           RN E LTP G
Sbjct: 92  RNNEGLTPLG 101


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 1   RNTEKLTPAG 10
           R T K+TP G
Sbjct: 396 RQTCKMTPFG 405


>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RNTEKLTPAG 10
           +NT + TP G
Sbjct: 303 KNTRQSTPIG 312


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 2   NTEKLTPAG 10
           ++++LTP G
Sbjct: 438 DSQRLTPGG 446


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 1   RNTEKLTPAG 10
           R T K+TP G
Sbjct: 390 RQTCKMTPFG 399


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3    TEKLTP 8
            TE+LTP
Sbjct: 3177 TERLTP 3182


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RNTEKLTPAG 10
           +NT + TP G
Sbjct: 302 QNTRQRTPIG 311


>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  RNTEKL 6
          RNT+KL
Sbjct: 72 RNTDKL 77




78|Sequence|386|395|LTPAGLAIKN

>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1   LTPAGLAIK 9
           LTPAGL +K
Sbjct: 612 LTPAGLQVK 620


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1   LTPAGLAIK 9
           LTPAGL ++
Sbjct: 612 LTPAGLQVR 620


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1   LTPAGLA 7
           LTP GLA
Sbjct: 826 LTPTGLA 832


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 651 FTPVGLAV 658


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 644 FTPVGLAV 651


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 650 FTPVGLAV 657


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 629 FTPVGLAV 636


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   LTPAGLAI 8
            TP GLA+
Sbjct: 154 FTPVGLAV 161


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    LTPAGLAIKN 10
            + P GL +KN
Sbjct: 1003 ICPLGLLLKN 1012


>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   TPAGLAIKN 10
           TP GL+ K+
Sbjct: 138 TPQGLSTKS 146


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 3    PAGLAIKN 10
            P GL +KN
Sbjct: 1006 PLGLLLKN 1013


>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  LTPAGLAIK 9
          ++ AGLA+K
Sbjct: 19 ISSAGLALK 27


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 5    GLAIKN 10
            GLA+KN
Sbjct: 1730 GLALKN 1735


>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40

Query: 2   TPAGLAIKN 10
           T  GLAI+N
Sbjct: 334 TSKGLAIEN 342




79|Sequence|391|400|LAIKNGQLEC

>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1    LAIKNGQLEC 10
            +A+ NG L C
Sbjct: 1175 MAVNNGDLSC 1184


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1    LAIKNGQLEC 10
            +A+ NG L C
Sbjct: 1176 MAVNNGDLSC 1185


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 547 ICIKNGNMRC 556


>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57

Query: 3  IKNGQLEC 10
          ++ GQ+EC
Sbjct: 80 VREGQVEC 87


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 3   IKNGQLEC 10
           ++ GQ+EC
Sbjct: 271 VREGQVEC 278


>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985

Query: 1   LAIKNGQLEC 10
           + +KNG + C
Sbjct: 550 MCVKNGNMRC 559


>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985

Query: 1   LAIKNGQLEC 10
           + +KNG + C
Sbjct: 550 MCVKNGNMRC 559


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   LAIKNGQLE 9
           + +KNG+LE
Sbjct: 756 VVLKNGELE 764


Query: 1    LAIKNGQL 8
            +A+KNG L
Sbjct: 2471 VAVKNGAL 2478


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   LAIKNGQLE 9
           + +KNG+LE
Sbjct: 756 VVLKNGELE 764


Query: 1    LAIKNGQL 8
            +A+KNG L
Sbjct: 2471 VAVKNGAL 2478


>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3   IKNGQLEC 10
           +K G+L+C
Sbjct: 355 VKEGKLQC 362


>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3   IKNGQLEC 10
           +K G+L+C
Sbjct: 355 VKEGKLQC 362


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 3   IKNGQLEC 10
           +K G+L+C
Sbjct: 355 VKEGKLQC 362


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 3   IKNGQLEC 10
           +K G+L+C
Sbjct: 355 VKEGKLQC 362


>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964

Query: 1   LAIKNGQLEC 10
           + IKNG + C
Sbjct: 557 ICIKNGNMRC 566


>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 1   LAIKNGQLE 9
           LA+KN Q E
Sbjct: 303 LALKNSQAE 311


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   LAIKNGQLE 9
           LA+KN Q E
Sbjct: 303 LALKNSQAE 311


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 1   LAIKNGQLE 9
           LA+KN Q E
Sbjct: 303 LALKNSQAE 311


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 1   LAIKNGQLE 9
           LA+KN Q E
Sbjct: 303 LALKNSQAE 311


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 1   LAIKNGQLE 9
           LA+KN Q E
Sbjct: 303 LALKNSQAE 311


>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   IKNGQLEC 10
           + NG+L C
Sbjct: 191 VANGELSC 198


>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   IKNGQLEC 10
           + NG+L C
Sbjct: 191 VANGELSC 198


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1   LAIKNGQLEC 10
           LA+ +G  EC
Sbjct: 374 LAVTDGSTEC 383


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 3   IKNGQLEC 10
           +  GQ+EC
Sbjct: 276 VGEGQVEC 283


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3    IKNGQLE 9
            I+NGQL+
Sbjct: 2505 IENGQLK 2511


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3    IKNGQLE 9
            I+NGQL+
Sbjct: 2505 IENGQLK 2511


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    IKNGQLE 9
            I+NGQL+
Sbjct: 2531 IENGQLK 2537


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    IKNGQLE 9
            I+NGQL+
Sbjct: 2531 IENGQLK 2537


>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   IKNGQLEC 10
           + +GQ EC
Sbjct: 134 LSSGQYEC 141


>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   IKNGQLEC 10
           + +GQ EC
Sbjct: 134 LSSGQYEC 141


>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain

Query: 2   AIKNGQL 8
           AIK GQL
Sbjct: 103 AIKRGQL 109


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 551 NGSLQC 556


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 555 NGSLQC 560


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 556 NGSLQC 561


>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 556 NGSLQC 561


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 559 NGSLQC 564


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 557 NGSLQC 562


>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 553 NGSLQC 558


>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 553 NGSLQC 558


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 1   LAIKNGQLE 9
           L +KN QLE
Sbjct: 519 LRLKNVQLE 527


>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957

Query: 5   NGQLEC 10
           NG L+C
Sbjct: 553 NGSLQC 558




80|Sequence|396|405|GQLECVRWMV

>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 3   LECVRWMV 10
           LEC+ W+V
Sbjct: 169 LECLLWLV 176


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   LECVRWMV 10
           LEC+ W+V
Sbjct: 169 LECLLWLV 176


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 3   LECVRWMV 10
           LEC+ W+V
Sbjct: 169 LECLLWLV 176


>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)

Query: 3   LECVRWM 9
           L+CV WM
Sbjct: 304 LKCVNWM 310


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1377 CVRWVM 1382


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1541 CVRWVM 1546


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5    CVRWMV 10
            CVRW++
Sbjct: 1543 CVRWVM 1548


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 3   LECVRW 8
           L+C+RW
Sbjct: 320 LKCLRW 325


>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)

Query: 3   LECVRWM 9
           LEC+ W+
Sbjct: 160 LECLLWL 166


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 2   QLECVRW 8
           Q+ CV W
Sbjct: 317 QISCVLW 323


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 2   QLECVRW 8
           Q+ CV W
Sbjct: 317 QISCVLW 323


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 2   QLECVRW 8
           Q+ CV W
Sbjct: 317 QISCVLW 323


>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   LECVRWM 9
           L+CV W+
Sbjct: 304 LKCVNWI 310


>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)

Query: 4   ECVRWM 9
           +C+RW+
Sbjct: 212 DCMRWL 217


>sp|UL96_HHV7J|PROTEIN U68|Human herpesvirus 7 (strain JI)

Query: 1  GQLECV 6
           QLECV
Sbjct: 79 AQLECV 84


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 2  QLECVRW 8
          +LEC+R+
Sbjct: 20 ELECLRF 26


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 2 QLECVRW 8
         +L+C+ W
Sbjct: 2 ELKCLNW 8


>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2

Query: 2  QLECVRWM 9
          Q ECV W+
Sbjct: 15 QNECVGWL 22


>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 6  QVDCFLWHV 14


>sp|NS1_I57A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/RI/5-/1957

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 7  QVDCFLWHV 15


>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United

Query: 4   ECVRW 8
           EC RW
Sbjct: 279 ECPRW 283


>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957

Query: 2  QLECVRWMV 10
          Q++C  W V
Sbjct: 10 QVDCFLWHV 18


>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3  LECVRWMV 10
          L CV W V
Sbjct: 44 LPCVLWPV 51


>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  LECVRWMV 10
          L CV W V
Sbjct: 44 LPCVLWPV 51


>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3  LECVRWMV 10
          L CV W V
Sbjct: 44 LPCVLWPV 51




81|Sequence|401|410|VRWMVSETEA

>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48

Query: 2   RWMVSETEA 10
           RW ++ET A
Sbjct: 96  RWTLAETSA 104


>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge

Query: 1   VRWMVSETE 9
           ++W++S+T+
Sbjct: 158 MKWLLSDTD 166


>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)

Query: 1   VRWMVSET 8
           VRW  S+T
Sbjct: 102 VRWARSQT 109


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4   MVSETEA 10
           M+S+TEA
Sbjct: 746 MISQTEA 752


>sp|UL145_HCMVM|PROTEIN UL145|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   WMVSET 8
           W+VSET
Sbjct: 103 WIVSET 108




82|Sequence|406|415|SETEAIAELS

>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1  SETEAIAELS 10
          S  +A+AELS
Sbjct: 84 SPEQAVAELS 93




83|Sequence|411|420|IAELSCSKDF

>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12

Query: 1   IAELSC 6
           IAELSC
Sbjct: 105 IAELSC 110


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2   AELSCSK 8
           AE+ CSK
Sbjct: 199 AEMGCSK 205


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2   AELSCSK 8
           AE+ CSK
Sbjct: 199 AEMGCSK 205


>sp|REV_HV19N|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 4  LSCSKD 9
          L CSKD
Sbjct: 83 LDCSKD 88


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   IAELSCSKD 9
           + ELSC K+
Sbjct: 723 LKELSCIKN 731


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   IAELSCSKD 9
           + ELSC K+
Sbjct: 723 LKELSCIKN 731


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1   IAELSCS 7
           +AEL CS
Sbjct: 283 LAELKCS 289


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4   LSCSKDF 10
           L C KDF
Sbjct: 198 LDCIKDF 204


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4   LSCSKDF 10
           L C KDF
Sbjct: 198 LDCIKDF 204




84|Sequence|416|425|CSKDFPSLIH

>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 933 SKDFPNM 939


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 939 SKDFPNM 945


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 939 SKDFPNM 945


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 939 SKDFPNM 945


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 939 SKDFPNM 945


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 939 SKDFPNM 945


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SKDFP++
Sbjct: 939 SKDFPNM 945


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 3   KDFPSLIH 10
           KDF S+IH
Sbjct: 572 KDFVSIIH 579


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   KDFPSLIH 10
           KDF S+IH
Sbjct: 572 KDFVSIIH 579


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 2   SKDFPSLI 9
           S  FPSLI
Sbjct: 464 SSPFPSLI 471


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 2   SKDFPSLI 9
           S  FPSLI
Sbjct: 464 SSPFPSLI 471


>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 1   CSKDFPS 7
           C+K FP+
Sbjct: 272 CNKTFPT 278


>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 1   CSKDFPS 7
           C+K FP+
Sbjct: 272 CNKTFPT 278


>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)

Query: 1   CSKDFPS 7
           C+K FP+
Sbjct: 272 CNKTFPT 278


>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate

Query: 1   CSKDFPS 7
           C+K FP+
Sbjct: 272 CNKTFPT 278


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 2   SKDFPSLIH 10
           S+D P L H
Sbjct: 705 SQDMPVLTH 713


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 3    KDFPSLIH 10
            + FP LIH
Sbjct: 2114 EQFPFLIH 2121


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 3    KDFPSLIH 10
            + FP LIH
Sbjct: 2114 EQFPFLIH 2121


>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5   FPSLIH 10
           FPSL H
Sbjct: 192 FPSLTH 197


>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5   FPSLIH 10
           FPSL H
Sbjct: 192 FPSLTH 197


>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   FPSLIH 10
           FPSL H
Sbjct: 192 FPSLTH 197


>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United

Query: 4 DFPSLI 9
         DFP+L+
Sbjct: 2 DFPNLV 7


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 5    FPSLIH 10
            FP LIH
Sbjct: 2116 FPFLIH 2121


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 248 NYPSILH 254


>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 248 NYPSILH 254


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 248 NYPSILH 254


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 248 NYPSILH 254


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 239 NYPSILH 245


>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 254 NYPSILH 260


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 239 NYPSILH 245


>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 250 NYPSILH 256


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 239 NYPSILH 245


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 240 NYPSILH 246


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 240 NYPSILH 246


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 247 NYPSILH 253


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 248 NYPSILH 254


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 4   DFPSLIH 10
           ++PS++H
Sbjct: 240 NYPSILH 246


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 5    FPSLIH 10
            FP LIH
Sbjct: 2116 FPFLIH 2121


>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus

Query: 2   SKDFPSLIH 10
           +K +P+L+H
Sbjct: 544 AKWYPTLLH 552


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 5    FPSLIH 10
            FP LIH
Sbjct: 2116 FPFLIH 2121


>sp|VFLIP_HHV8P|VIRAL FLICE protein|Human herpesvirus 8 type P

Query: 1   CSKDFPSLI 9
           C++D  SLI
Sbjct: 106 CARDIRSLI 114


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 5    FPSLIH 10
            FP LIH
Sbjct: 2101 FPFLIH 2106


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2   SKDFPSL 8
           SK+FP++
Sbjct: 939 SKEFPNM 945


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 3    KDFPSLIH 10
            + FP L+H
Sbjct: 2100 QQFPFLVH 2107


>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   SKDFPSLIH 10
           SK F  L+H
Sbjct: 143 SKSFSELLH 151


>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)

Query: 2   SKDFPSLIH 10
           SK F  L+H
Sbjct: 143 SKSFSELLH 151


>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant

Query: 2   SKDFPSLIH 10
           SK F  L+H
Sbjct: 143 SKSFSELLH 151


>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P

Query: 1   CSKDFPSL 8
           CSK  PSL
Sbjct: 152 CSKPPPSL 159




85|Sequence|421|430|PSLIHYAGCY

>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFVGCY 318


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 2   SLIHYAGCY 10
           +LIH+ GCY
Sbjct: 310 NLIHFIGCY 318


>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)

Query: 2  SLIHYAGC 9
          +L+H AGC
Sbjct: 9  ALLHIAGC 16


>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30

Query: 1   PSLIHYAGCY 10
           PS++ Y G Y
Sbjct: 149 PSVVDYKGIY 158


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    PSLIHYAGCY 10
            PS I  AGC+
Sbjct: 5212 PSRILSAGCF 5221


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 5    HYAGC 9
            HY GC
Sbjct: 1813 HYVGC 1817


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 3    LIHYAGC 9
             + YAGC
Sbjct: 1530 FLQYAGC 1536


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 3    LIHYAGC 9
             + YAGC
Sbjct: 1529 FLQYAGC 1535


>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate

Query: 1   PSLIHYAGCY 10
           P+ ++Y G Y
Sbjct: 299 PNKVYYIGAY 308


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    SLIHYAGC 9
            S +H AGC
Sbjct: 1322 SRLHEAGC 1329


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    SLIHYAGC 9
            S +H AGC
Sbjct: 1322 SRLHEAGC 1329


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 1   PSLIHY 6
           PSL HY
Sbjct: 931 PSLAHY 936


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 1   PSLIHY 6
           PSL HY
Sbjct: 931 PSLAHY 936


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    SLIHYAGC 9
            S +H AGC
Sbjct: 1322 SRLHEAGC 1329


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4  IHYAGCY 10
          +H+A CY
Sbjct: 74 LHWALCY 80


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    LIHYAG 8
             +HYAG
Sbjct: 3775 FVHYAG 3780


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    LIHYAG 8
             +HYAG
Sbjct: 3775 FVHYAG 3780


>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV

Query: 1   PSLIHYAGCY 10
           P  ++Y G Y
Sbjct: 299 PRKVYYIGAY 308


>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35

Query: 2   SLIHYAGCY 10
           ++ +YA CY
Sbjct: 164 TITYYACCY 172


>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2   SLIHYAGCY 10
           ++ +YA CY
Sbjct: 164 TITYYACCY 172


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3   LIHYAGC 9
           ++H AGC
Sbjct: 220 ILHLAGC 226


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    SLIHYAGC 9
            S +H AGC
Sbjct: 1322 SGLHEAGC 1329


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 1  PSLIHYAG 8
          P+LI Y+G
Sbjct: 64 PNLITYSG 71


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 3   LIHYAGCY 10
           L+HY+G +
Sbjct: 183 LVHYSGTH 190


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2812 HYCGSY 2817


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2811 HYCGSY 2816


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2812 HYCGSY 2817


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2811 HYCGSY 2816


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2811 HYCGSY 2816


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2812 HYCGSY 2817


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2811 HYCGSY 2816


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2811 HYCGSY 2816


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 5    HYAGCY 10
            HY G Y
Sbjct: 2811 HYCGSY 2816




86|Sequence|426|435|YAGCYGQEKI

>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3    GCYGQ 7
            GCYGQ
Sbjct: 2367 GCYGQ 2371


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 3    GCYGQ 7
            GCYGQ
Sbjct: 2365 GCYGQ 2369


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    AGCYGQ 7
            AGC+GQ
Sbjct: 2373 AGCWGQ 2378


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    AGCYGQ 7
            AGC+GQ
Sbjct: 2373 AGCWGQ 2378


>sp|TAT_HV197|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 4  CYGQEK 9
          CYG+EK
Sbjct: 46 CYGREK 51


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 3   GCYGQEKI 10
           G YGQ++I
Sbjct: 681 GTYGQQRI 688


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 3   GCYGQEKI 10
           G YGQ++I
Sbjct: 681 GTYGQQRI 688


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   GCYGQEKI 10
           G YGQ++I
Sbjct: 681 GTYGQQRI 688


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3   GCYGQEKI 10
           G YGQ++I
Sbjct: 681 GTYGQQRI 688


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 3   GCYGQEKI 10
           G YGQ++I
Sbjct: 681 GTYGQQRI 688


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   YAGCYGQEKI 10
           +A CYG + I
Sbjct: 645 FANCYGWQYI 654


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   GCYGQEK 9
           GCY QE+
Sbjct: 927 GCYYQEE 933


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 3   GCYGQEK 9
           GCY QE+
Sbjct: 927 GCYYQEE 933


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    YAGCYGQ 7
            + GC+GQ
Sbjct: 2373 FLGCWGQ 2379


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    YAGCYGQ 7
            + GC+GQ
Sbjct: 2373 FLGCWGQ 2379


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 1    YAGCYGQ 7
            + GC+GQ
Sbjct: 2371 FLGCWGQ 2377


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 1    YAGCYGQ 7
            + GC+GQ
Sbjct: 2371 FLGCWGQ 2377


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 1    YAGCYGQ 7
            + GC+GQ
Sbjct: 2371 FLGCWGQ 2377


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1    YAGCYGQ 7
            + GC+GQ
Sbjct: 2371 FLGCWGQ 2377


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1   YAGCYGQEKI 10
           Y   YG EK+
Sbjct: 124 YGAAYGPEKL 133


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1   YAGCYGQE 8
           Y GC G E
Sbjct: 129 YGGCRGGE 136


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1   YAGCYGQE 8
           Y GC G E
Sbjct: 129 YGGCRGGE 136


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 1   YAGCYGQEK 9
           YA CY   +
Sbjct: 271 YASCYANHR 279


>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4   CYGQEK 9
           C+G+EK
Sbjct: 326 CFGREK 331


>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   CYGQEK 9
           C+G+EK
Sbjct: 326 CFGREK 331


>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   CYGQEK 9
           C+G+EK
Sbjct: 326 CFGREK 331


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   YAGCYGQ 7
           Y GCY +
Sbjct: 413 YVGCYNK 419


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   YAGCYGQ 7
           Y GCY +
Sbjct: 413 YVGCYNK 419


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 3    GCYGQ 7
            GC+GQ
Sbjct: 2371 GCWGQ 2375


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 3    GCYGQ 7
            GC+GQ
Sbjct: 2366 GCWGQ 2370


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 3   GCYG---QEKI 10
           GCYG   QE I
Sbjct: 590 GCYGSLPQEHI 600


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 3   GCYG---QEKI 10
           GCYG   QE I
Sbjct: 590 GCYGSLPQEHI 600


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 3   GCYG 6
           GCYG
Sbjct: 590 GCYG 593


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 3   GCYG 6
           GCYG
Sbjct: 590 GCYG 593


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 3   GCYG 6
           GCYG
Sbjct: 601 GCYG 604


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 727 ANCFGQ 732


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 2   AGCYGQ 7
           A C+GQ
Sbjct: 735 ANCFGQ 740


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2368 GCYSQ 2372


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2368 GCYSQ 2372


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2364 GCYSQ 2368


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2336 GCYSQ 2340


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2336 GCYSQ 2340


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2336 GCYSQ 2340


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2336 GCYSQ 2340


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2336 GCYSQ 2340


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2339 GCYSQ 2343


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2339 GCYSQ 2343


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2339 GCYSQ 2343


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2339 GCYSQ 2343


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2339 GCYSQ 2343


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2340 GCYSQ 2344


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2337 GCYSQ 2341


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2340 GCYSQ 2344


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2340 GCYSQ 2344


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2340 GCYSQ 2344


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2340 GCYSQ 2344


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2340 GCYSQ 2344


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2342 GCYSQ 2346


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2341 GCYSQ 2345


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3    GCYGQ 7
            GCY Q
Sbjct: 2342 GCYSQ 2346


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   YAGCYGQEKI 10
           YA   GQ+K+
Sbjct: 300 YAALVGQDKL 309


>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV

Query: 2  AGCYGQ 7
          +GCYG+
Sbjct: 59 SGCYGR 64


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   YAGCYGQEKI 10
           YA   GQ+K+
Sbjct: 301 YAALVGQDKL 310


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   YAGCYGQEKI 10
           YA   GQ+K+
Sbjct: 301 YAALVGQDKL 310


>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)

Query: 1   YAGCYGQEK 9
           Y G YG+++
Sbjct: 282 YIGIYGRDE 290




87|Sequence|431|440|GQEKILLWLL

>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)

Query: 3    EKILLWLL 10
            EKIL WL+
Sbjct: 1263 EKILKWLI 1270


>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 4   KILLWLL 10
           ++LLWLL
Sbjct: 170 EVLLWLL 176


>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   KILLWLL 10
           ++LLWLL
Sbjct: 184 EVLLWLL 190


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1    GQEKILLW 8
            G+E +L+W
Sbjct: 1689 GKETLLIW 1696


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 2  QEKILLWLL 10
          +EKI +W L
Sbjct: 63 KEKIFMWDL 71


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 186 GKEVLVLW 193


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 186 GKEVLVLW 193


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 186 GKEVLVLW 193


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 1   GQEKILLW 8
           G+E ++LW
Sbjct: 187 GKEVLVLW 194


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 1   GQEKILLWL 9
           G E  ++WL
Sbjct: 107 GNESSIMWL 115


>sp|PB1F2_I45A0|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 1  GQEKILLWLL 10
          GQE+ + W+L
Sbjct: 2  GQEQDIPWIL 11


>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)

Query: 1   GQEKILLWLL 10
           G +K+L W L
Sbjct: 385 GVQKVLTWPL 394


>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)

Query: 1   GQEKILLWLL 10
           G +K+L W L
Sbjct: 385 GVQKVLTWPL 394


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3    EKILLWLL 10
            +KI+ W+L
Sbjct: 1028 KKIIKWML 1035




88|Sequence|436|445|LLWLLQFMQE

>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2   LWLLQFM 8
           +W LQ+M
Sbjct: 843 IWWLQYM 849


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2   LWLLQFM 8
           +W LQ+M
Sbjct: 843 IWWLQYM 849


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 4   LLQFMQ 9
           L+QFMQ
Sbjct: 488 LMQFMQ 493


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   LLWLLQF 7
           L+W LQ+
Sbjct: 842 LIWWLQY 848


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 1   LLWLLQFM 8
           +LW  QFM
Sbjct: 393 VLWEQQFM 400


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 1   LLWLLQFM 8
           +LW  QFM
Sbjct: 393 VLWEQQFM 400




89|Sequence|441|450|QFMQEQGISL

>sp|PG187_VAR67|B1 kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   QFMQEQGIS 9
           QFM EQG S
Sbjct: 136 QFMHEQGYS 144


>sp|PG187_VACCA|B1 kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 1   QFMQEQGIS 9
           QFM EQG S
Sbjct: 136 QFMHEQGYS 144


>sp|PG187_VACCC|B1 kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   QFMQEQGIS 9
           QFM EQG S
Sbjct: 136 QFMHEQGYS 144


>sp|PG187_MONPV|B1 kinase|Monkeypox virus (MPXV)

Query: 1   QFMQEQGIS 9
           QFM EQG S
Sbjct: 136 QFMHEQGYS 144


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 1   QFMQEQGISL 10
           QF++ QGI  
Sbjct: 441 QFLRYQGIEF 450


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1   QFMQEQGISL 10
           QF++ QG+++
Sbjct: 395 QFLKYQGVNI 404


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 1   QFMQEQGISL 10
           QF++ QG+++
Sbjct: 394 QFLKYQGVNI 403


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1   QFMQEQGISL 10
           +F+QE+G  L
Sbjct: 205 EFIQERGFFL 214


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1   QFMQEQGISL 10
           QF++ QG++ 
Sbjct: 389 QFLKYQGVNF 398


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   QFMQEQGISL 10
           +F+QE+G  L
Sbjct: 205 EFIQERGFFL 214


>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)

Query: 2   FMQEQGISL 10
           FM E G+SL
Sbjct: 129 FMDEFGLSL 137


>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)

Query: 2   FMQEQGISL 10
           F+Q +GI+L
Sbjct: 272 FLQYRGITL 280


>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant

Query: 2   FMQEQGISL 10
           F+Q +GI+L
Sbjct: 272 FLQYRGITL 280


>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   FMQEQGISL 10
           F+Q +GI+L
Sbjct: 272 FLQYRGITL 280


>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain

Query: 3   MQEQGISL 10
           +QE+GI L
Sbjct: 221 LQEKGIKL 228




90|Sequence|446|455|QGISLDEVDQ

>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 1   QGISLDEV 8
           QG+SLD+V
Sbjct: 813 QGLSLDKV 820


>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 1   QGISLDEV 8
           QG+SLD+V
Sbjct: 814 QGLSLDKV 821


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1    QGISLDEV 8
            +G++LDEV
Sbjct: 1708 EGVNLDEV 1715


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1    QGISLDEVD 9
            +GI LDE++
Sbjct: 2046 KGIDLDELN 2054


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1    QGISLDEVD 9
            +GI LDE++
Sbjct: 2046 KGIDLDELN 2054


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1    QGISLDEVD 9
            +GI LDE++
Sbjct: 2046 KGIDLDELN 2054


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1    QGISLDEVD 9
            +GI LDE++
Sbjct: 2046 KGIDLDELN 2054


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 1    QGISLDEV 8
            +GI LDE+
Sbjct: 2046 KGIDLDEL 2053


>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1   QGISLDEV 8
           +G+SLD++
Sbjct: 628 EGMSLDDI 635


>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5

Query: 2  GISLDE 7
          G+SLDE
Sbjct: 69 GLSLDE 74




91|Sequence|451|460|DEVDQDGNSA

>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2    EVDQDGN 8
            E+DQDGN
Sbjct: 1445 EIDQDGN 1451


>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 1   DEVDQDGNS 9
           DE D DGN+
Sbjct: 629 DEGDNDGNT 637


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4822 QDGNAA 4827


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4809 QDGNAA 4814


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4836 QDGNAA 4841


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4847 QDGNAA 4852


Query: 3    VDQDGN 8
            +D DGN
Sbjct: 4466 IDDDGN 4471


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4813 QDGNAA 4818


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4867 QDGNAA 4872


Query: 3    VDQDGN 8
            +D DGN
Sbjct: 4486 IDDDGN 4491


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5    QDGNSA 10
            QDGN+A
Sbjct: 4897 QDGNAA 4902


>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)

Query: 1  DEVDQDGN 8
          +E D DGN
Sbjct: 62 NETDDDGN 69


>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  DEVDQDGN 8
          +E D DGN
Sbjct: 92 NETDDDGN 99


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 3   VDQDGNSA 10
           VDQ GN A
Sbjct: 684 VDQTGNMA 691


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 4   DQDGNSA 10
           D DGN+A
Sbjct: 378 DADGNAA 384


>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)

Query: 1  DEVDQDGN 8
          +E D DGN
Sbjct: 66 NETDDDGN 73


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 3   VDQDGNSA 10
           VDQ GN A
Sbjct: 729 VDQTGNVA 736


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3   VDQDGNS 9
           +D DGN+
Sbjct: 944 IDPDGNT 950


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 4    DQDGNSA 10
            DQD NS+
Sbjct: 2080 DQDDNSS 2086


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 4    DQDGNSA 10
            DQD NS+
Sbjct: 2079 DQDDNSS 2085


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3   VDQDGN 8
           +D DGN
Sbjct: 448 IDSDGN 453




92|Sequence|456|465|DGNSAVHVAS

>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)

Query: 1  DGNSAVHVAS 10
          DGN  +H+AS
Sbjct: 67 DGNYPLHIAS 76


Query: 1   DGNSAVHV 8
           DGN+ +H+
Sbjct: 203 DGNTPLHI 210


>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   DGNSAVHVAS 10
           DGN  +H+AS
Sbjct: 97  DGNYPLHIAS 106


Query: 1   DGNSAVHV 8
           DGN+ +H+
Sbjct: 233 DGNTPLHI 240


>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)

Query: 1  DGNSAVHVAS 10
          DGN  +H+AS
Sbjct: 71 DGNYPLHIAS 80


Query: 1   DGNSAVHV 8
           DGN+ +H+
Sbjct: 207 DGNTPLHI 214


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   DGNSAVHVAS 10
           DGN+A H+++
Sbjct: 463 DGNNATHLSN 472


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   DGNSAVHVAS 10
           DGN+A H+++
Sbjct: 463 DGNNATHLSN 472


>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)

Query: 3   NSAVHV 8
           NSAVHV
Sbjct: 141 NSAVHV 146


>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain

Query: 3   NSAVHV 8
           NSAVHV
Sbjct: 141 NSAVHV 146


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1246 AVHVAS 1251


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1246 AVHVAS 1251


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1245 AVHVAS 1250


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1247 AVHVAS 1252


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1244 AVHVAS 1249


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1246 AVHVAS 1251


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1247 AVHVAS 1252


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1244 AVHVAS 1249


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1245 AVHVAS 1250


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1245 AVHVAS 1250


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1245 AVHVAS 1250


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1246 AVHVAS 1251


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1224 AVHVAS 1229


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1233 AVHVAS 1238


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1233 AVHVAS 1238


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1218 AVHVAS 1223


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1224 AVHVAS 1229


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1216 AVHVAS 1221


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1221 AVHVAS 1226


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1220 AVHVAS 1225


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1220 AVHVAS 1225


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1224 AVHVAS 1229


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1222 AVHVAS 1227


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1220 AVHVAS 1225


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1224 AVHVAS 1229


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1218 AVHVAS 1223


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1229 AVHVAS 1234


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1228 AVHVAS 1233


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1222 AVHVAS 1227


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1227 AVHVAS 1232


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1227 AVHVAS 1232


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1235 AVHVAS 1240


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1235 AVHVAS 1240


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1235 AVHVAS 1240


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1222 AVHVAS 1227


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1225 AVHVAS 1230


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1218 AVHVAS 1223


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1218 AVHVAS 1223


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1218 AVHVAS 1223


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1219 AVHVAS 1224


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5    AVHVAS 10
            AVHVAS
Sbjct: 1223 AVHVAS 1228


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2   GNSAVH 7
           GN AVH
Sbjct: 976 GNEAVH 981


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 2   GNSAVH 7
           GN AVH
Sbjct: 978 GNRAVH 983


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2   GNSAVH 7
           GN AVH
Sbjct: 976 GNRAVH 981


>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain

Query: 2   GNSAVHVAS 10
           GN A HV +
Sbjct: 144 GNDAAHVEA 152


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2   GNSAVH 7
           GN AVH
Sbjct: 983 GNHAVH 988


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   DGNSAVHVA 9
           DGN   HVA
Sbjct: 133 DGNFFTHVA 141


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1   DGNSAVHVAS 10
           +GN+ V VAS
Sbjct: 210 NGNAYVSVAS 219




93|Sequence|461|470|VHVASQHGYL

>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 1   VHVASQHGYL 10
           +H A +HGY+
Sbjct: 332 LHYAFRHGYV 341


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 1   VHVASQHGYL 10
           +H A +HGY+
Sbjct: 330 LHYAFRHGYV 339


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    VASQHGY 9
            V+ QHGY
Sbjct: 2009 VSCQHGY 2015


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 1   VHVASQHGY 9
           VH +  HGY
Sbjct: 184 VHYSGTHGY 192


>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33

Query: 1   VHVASQHGY 9
           VH   QH Y
Sbjct: 373 VHTPMQHSY 381


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 4    ASQHGY 9
            ASQHG+
Sbjct: 1657 ASQHGH 1662


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2    HVASQHG 8
            HV+SQ G
Sbjct: 2702 HVSSQQG 2708


>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 3    VASQHGYL 10
            V+ QH YL
Sbjct: 1072 VSRQHAYL 1079


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 3    VASQHGYL 10
            V+ QH YL
Sbjct: 1044 VSRQHAYL 1051


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   HVASQHGYL 10
           H+   HGY 
Sbjct: 424 HIVDGHGYF 432


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   HVASQHGYL 10
           H+   HGY 
Sbjct: 425 HIVDGHGYF 433


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   HVASQHGYL 10
           H+   HGY 
Sbjct: 425 HIVDGHGYF 433


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   HVASQHGYL 10
           H+   HGY 
Sbjct: 425 HIVDGHGYF 433


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 2   HVASQHGYL 10
           H+   HGY 
Sbjct: 425 HIVDGHGYF 433


>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56

Query: 1   VHVASQH 7
           VHV+S H
Sbjct: 150 VHVSSTH 156


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 4   ASQHGY 9
           A++HGY
Sbjct: 139 ATEHGY 144


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 4   ASQHGY 9
           A++HGY
Sbjct: 139 ATEHGY 144


>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30

Query: 1   VHVASQH 7
           VHV+S H
Sbjct: 150 VHVSSTH 156


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    VHVASQH 7
            VHV S+H
Sbjct: 2793 VHVMSKH 2799


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    VHVASQH 7
            VHV S+H
Sbjct: 2793 VHVMSKH 2799


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 2   HVASQHGY 9
           H+A  H Y
Sbjct: 292 HIAGSHDY 299


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 2   HVASQHGYL 10
           H+AS H  L
Sbjct: 170 HIASSHNKL 178


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 4    ASQHG 8
            ASQHG
Sbjct: 1656 ASQHG 1660


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 4    ASQHG 8
            ASQHG
Sbjct: 1656 ASQHG 1660


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1    VHVASQHGY 9
            +HVA   GY
Sbjct: 1869 IHVAGVAGY 1877


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1    VHVASQHGY 9
            +HVA   GY
Sbjct: 1866 IHVAGVAGY 1874




94|Sequence|466|475|QHGYLGCIQT

>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)

Query: 1    QHGYLGC 7
            QH YL C
Sbjct: 1075 QHAYLAC 1081


>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)

Query: 1    QHGYLGC 7
            QH YL C
Sbjct: 1047 QHAYLAC 1053


>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3  GYLGC 7
          GYLGC
Sbjct: 69 GYLGC 73


>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  GYLGC 7
          GYLGC
Sbjct: 69 GYLGC 73


>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3  GYLGC 7
          GYLGC
Sbjct: 69 GYLGC 73


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1   QHGYLGCIQ 9
           QHG L C+ 
Sbjct: 829 QHGLLPCLH 837


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 1   QHGYLGCIQ 9
           QHG L C+ 
Sbjct: 829 QHGLLPCLH 837


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1   QHGYLGCIQ 9
           QHG L C+ 
Sbjct: 824 QHGLLPCLH 832


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1   QHGYLGCIQ 9
           QHG L C+ 
Sbjct: 824 QHGLLPCLH 832


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1   QHGYLGCIQ 9
           QHG L C+ 
Sbjct: 824 QHGLLPCLH 832


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1   QHGYLGCIQ 9
           QHG L C+ 
Sbjct: 824 QHGLLPCLH 832


>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  HGYLGCIQT 10
          HG+  C+QT
Sbjct: 62 HGHDKCMQT 70


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    QHGYLG 6
            QHGY G
Sbjct: 2012 QHGYKG 2017


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1   QHGYLGCIQ 9
           Q GY+ C Q
Sbjct: 386 QFGYIDCEQ 394


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 1   QHGYLGCI 8
           QH +LG I
Sbjct: 762 QHTFLGVI 769


>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)

Query: 2   HGYLG 6
           HGYLG
Sbjct: 294 HGYLG 298


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1   QHGYLGCIQ 9
           Q GY+ C Q
Sbjct: 386 QFGYIDCEQ 394


Query: 3    GYLGC 7
            GY GC
Sbjct: 6121 GYYGC 6125


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 4   YLGCI 8
           YLGC+
Sbjct: 716 YLGCV 720


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 4   YLGCI 8
           YLGC+
Sbjct: 716 YLGCV 720


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 1   QHGYLGCI 8
           +HGY  C+
Sbjct: 141 EHGYSICV 148


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 1   QHGYLGCI 8
           +HGY  C+
Sbjct: 141 EHGYSICV 148


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 4   YLGCI 8
           YLGC+
Sbjct: 720 YLGCV 724


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 4   YLGCI 8
           YLGC+
Sbjct: 717 YLGCV 721


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 1   QHGYLGCIQT 10
           +H Y  C++T
Sbjct: 543 EHIYYTCVRT 552


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 1   QHGYLGCIQT 10
           +H Y  C++T
Sbjct: 543 EHIYYTCVRT 552


>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 2   HGYLGCIQ 9
           H Y  C+Q
Sbjct: 113 HAYFWCVQ 120


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   HGYLGCIQ 9
           H Y  C+Q
Sbjct: 113 HAYFWCVQ 120


>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United

Query: 3   GYLGCI 8
           GYL C+
Sbjct: 494 GYLTCV 499


>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   QHGYLGCIQ 9
           +H Y  CI+
Sbjct: 409 RHEYTACIR 417


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  HGYLG 6
          HG+LG
Sbjct: 72 HGFLG 76


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  HGYLG 6
          HG+LG
Sbjct: 72 HGFLG 76


>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   QHGYLGCIQ 9
           +H Y  CI+
Sbjct: 409 RHEYTACIR 417


>sp|UL92_HHV8P|PROTEIN ORF31|Human herpesvirus 8 type P

Query: 2  HGYLGCIQ 9
          HG L C++
Sbjct: 81 HGMLACLK 88


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    GYLGC 7
            GY GC
Sbjct: 6159 GYYGC 6163


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    GYLGC 7
            GY GC
Sbjct: 6179 GYYGC 6183


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    GYLGC 7
            GY GC
Sbjct: 6209 GYYGC 6213


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 4    YLGCIQ 9
            Y+GC++
Sbjct: 1814 YVGCLE 1819


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2   HGYLGCI 8
           HG L C+
Sbjct: 680 HGLLPCV 686


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2   HGYLGCI 8
           HG L C+
Sbjct: 680 HGLLPCV 686




95|Sequence|471|480|GCIQTLVEYG

>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   GCIQTLVEY 9
           GC  TL EY
Sbjct: 210 GCFGTLQEY 218


>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936

Query: 2  CIQTLVEYG 10
          CI  L EYG
Sbjct: 50 CIYRLFEYG 58


>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   GCIQTLVEY 9
           GC  TL EY
Sbjct: 210 GCFGTLHEY 218


>sp|PG055_VARV|PROTEIN OPG055|Variola virus

Query: 3   IQTLVEYG 10
           I TL++YG
Sbjct: 241 IDTLIQYG 248


>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   IQTLVEYG 10
           I TL++YG
Sbjct: 241 IDTLIQYG 248


>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2   CIQTLVE 8
           CIQTL E
Sbjct: 99  CIQTLNE 105


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   CIQTLVE 8
           CIQTL E
Sbjct: 99  CIQTLNE 105


>sp|M2_I85A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Netherlands/12/1985

Query: 2  CIQTLVEYG 10
          CI  L++YG
Sbjct: 50 CIYRLLKYG 58


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 4   QTLVEYG 10
           QT+VE+G
Sbjct: 338 QTIVEHG 344


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 4   QTLVEYG 10
           QT+VE+G
Sbjct: 341 QTIVEHG 347


>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong

Query: 2  CIQTLVEYG 10
          CI  L++YG
Sbjct: 50 CIYRLLKYG 58


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2   CIQTLVEYG 10
           C Q L EYG
Sbjct: 817 CEQLLREYG 825


>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937

Query: 2  CIQTLVEYG 10
          CI   +EYG
Sbjct: 50 CIYRRLEYG 58


>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954

Query: 2  CIQTLVEYG 10
          CI   +EYG
Sbjct: 50 CIYRRLEYG 58


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 4   QTLVEYG 10
           QT++E+G
Sbjct: 344 QTVIEHG 350


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 4   QTLVEYG 10
           QT++E+G
Sbjct: 344 QTVIEHG 350


>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   GCIQTLVEY 9
           GC   L EY
Sbjct: 210 GCFGALQEY 218


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   GCIQTLVEY 9
           GC   L EY
Sbjct: 210 GCFGALQEY 218


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3   IQTLVEYG 10
           +QT V++G
Sbjct: 469 VQTAVDFG 476




96|Sequence|476|485|LVEYGANVTM

>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /

Query: 1   LVEYGANV 8
           L+EYGANV
Sbjct: 481 LLEYGANV 488


>sp|VC18_VACCC|ANKYRIN repeat protein C18/B24|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  LVEYGANVT 9
          L+EYGA+VT
Sbjct: 61 LLEYGASVT 69


>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)

Query: 1   LVEYGANV 8
           +++YGAN+
Sbjct: 239 IIDYGANI 246


>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45

Query: 2   VEYGANV 8
           V+YG NV
Sbjct: 193 VQYGGNV 199


>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P

Query: 2   VEYGANVT 9
           ++YGAN++
Sbjct: 106 LKYGANIS 113


>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain

Query: 2  VEYGAN 7
          +EYGAN
Sbjct: 37 LEYGAN 42


>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain

Query: 2  VEYGAN 7
          +EYGAN
Sbjct: 37 LEYGAN 42


>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus

Query: 2  VEYGAN 7
          +EYGAN
Sbjct: 37 LEYGAN 42


>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate

Query: 2  VEYGAN 7
          +EYGAN
Sbjct: 37 LEYGAN 42


>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 2  VEYGAN 7
          +EYGAN
Sbjct: 37 LEYGAN 42


>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)

Query: 2  VEYGAN 7
          +EYGAN
Sbjct: 37 LEYGAN 42


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 2    VEYGANVTM 10
            ++YG N+T+
Sbjct: 1900 IDYGENLTI 1908


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 2    VEYGANVTM 10
            ++YG N+T+
Sbjct: 1900 IDYGENLTI 1908


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 2    VEYGANVTM 10
            ++YG N+T+
Sbjct: 1900 IDYGENLTI 1908


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 1  LVEYGANV 8
          ++EYG N+
Sbjct: 65 ILEYGENI 72


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  LVEYGANV 8
          ++EYG N+
Sbjct: 62 ILEYGENI 69


>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus

Query: 1  LVEYGANV 8
          ++EYG N+
Sbjct: 62 ILEYGENI 69


>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate

Query: 1  LVEYGANV 8
          ++EYG N+
Sbjct: 62 ILEYGENI 69




97|Sequence|481|490|ANVTMQNHAG

>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   NVTMQNH 8
           NVTM+N+
Sbjct: 137 NVTMKNN 143




98|Sequence|486|495|QNHAGEKPSQ

>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   QNHAGEKPSQ 10
           + H G KPSQ
Sbjct: 206 RTHVGPKPSQ 215


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    HAGEKP 8
            HAGE P
Sbjct: 6447 HAGEAP 6452


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2   NHAGEKPSQ 10
           NH   KP Q
Sbjct: 468 NHVKRKPDQ 476


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4    AGEKPS 9
            +GEKPS
Sbjct: 1874 SGEKPS 1879


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4    AGEKPS 9
            +GEKPS
Sbjct: 1874 SGEKPS 1879


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4    AGEKPS 9
            +GEKPS
Sbjct: 1874 SGEKPS 1879


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4    AGEKPS 9
            +GEKPS
Sbjct: 1874 SGEKPS 1879


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4    AGEKPS 9
            +GEKPS
Sbjct: 1874 SGEKPS 1879


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 2   NHAGEKP 8
           NH G KP
Sbjct: 277 NHRGTKP 283


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 5   GEKPSQ 10
           GEKP Q
Sbjct: 968 GEKPCQ 973




99|Sequence|491|500|EKPSQSAERQ

>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   KPSQSAER 9
           KPS++AER
Sbjct: 192 KPSEAAER 199


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   KPSQSAER 9
           KPS++AER
Sbjct: 192 KPSEAAER 199


>sp|US9_VZVO|ENVELOPE protein US9|Varicella-zoster virus (strain Oka vaccine)

Query: 2  KPSQSAER 9
          +PS+SAE+
Sbjct: 35 QPSRSAEK 42


>sp|US9_VZVD|ENVELOPE protein US9|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  KPSQSAER 9
          +PS+SAE+
Sbjct: 35 QPSRSAEK 42




100|Sequence|496|505|SAERQGHTLC

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 6    GHTLC 10
            GHT+C
Sbjct: 1927 GHTVC 1931


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 6    GHTLC 10
            GHT+C
Sbjct: 1927 GHTVC 1931


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1   SAERQGHTLC 10
           + E QG T+C
Sbjct: 363 AEEHQGGTVC 372


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1   SAERQGHTLC 10
           + E QG T+C
Sbjct: 363 AEEHQGGTVC 372


>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36

Query: 3   ERQGHTLC 10
           ERQ + LC
Sbjct: 178 ERQDNRLC 185


>sp|PG192_VACCC|PROTEIN OPG192|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SAERQGHT 8
           + +R+GHT
Sbjct: 95  TIQRRGHT 102


>sp|PG192_MONPV|PROTEIN OPG192|Monkeypox virus (MPXV)

Query: 1   SAERQGHT 8
           + +R+GHT
Sbjct: 95  TIQRRGHT 102


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 6    GHTLC 10
            GHT C
Sbjct: 1106 GHTFC 1110


>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   SAERQGHT 8
           S ER+ HT
Sbjct: 273 SGEREPHT 280


>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)

Query: 6   GHTLC 10
           GHT C
Sbjct: 524 GHTTC 528


>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)

Query: 6   GHTLC 10
           GHT C
Sbjct: 524 GHTTC 528


>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)

Query: 6   GHTLC 10
           GHT C
Sbjct: 524 GHTTC 528


>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)

Query: 6   GHTLC 10
           GHT C
Sbjct: 524 GHTTC 528




101|Sequence|501|510|GHTLCSRYLV

>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)

Query: 1   GHTLCSRYLV 10
           G T+C +YLV
Sbjct: 188 GKTICIKYLV 197


>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)

Query: 1  GHTLCSR 7
          GH LCS+
Sbjct: 89 GHILCSK 95


>sp|PG045_MONPV|APOPTOSIS regulator OPG045|Monkeypox virus (MPXV)

Query: 2   HTLCSRYLV 10
           HT+C  Y V
Sbjct: 169 HTICDDYFV 177


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 1   GHTLCSR 7
           GH  CSR
Sbjct: 341 GHEWCSR 347


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    HTLCSRYL 9
            H +C +YL
Sbjct: 2940 HAICGKYL 2947


>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)

Query: 1   GHTLCSR 7
           GHT C R
Sbjct: 524 GHTTCFR 530


>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)

Query: 1   GHTLCSR 7
           GHT C R
Sbjct: 524 GHTTCFR 530


>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)

Query: 1   GHTLCSR 7
           GHT C R
Sbjct: 524 GHTTCFR 530


>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)

Query: 1   GHTLCSR 7
           GHT C R
Sbjct: 524 GHTTCFR 530


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 3   TLCSRYL 9
           TLC +YL
Sbjct: 726 TLCLKYL 732


>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   LCSRYL 9
           +CS+YL
Sbjct: 610 ICSKYL 615


>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain

Query: 2   HTLCSRYLV 10
           H LC R ++
Sbjct: 138 HALCKRKML 146


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 4   LCSRYLV 10
           LC R+LV
Sbjct: 187 LCFRFLV 193


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 1   GHTLCSR 7
           GH  C+R
Sbjct: 161 GHECCAR 167


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 1   GHTLCSR 7
           GH  C+R
Sbjct: 161 GHECCAR 167


>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   LCSRYL 9
           LC RY+
Sbjct: 439 LCERYI 444


>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)

Query: 2   HTLCS 6
           HTLC+
Sbjct: 592 HTLCT 596


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 1   GHTLC 5
           GH LC
Sbjct: 402 GHALC 406


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 2   HTLCS 6
           HTLC+
Sbjct: 590 HTLCT 594


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   GHTLCSRYLV 10
           GH   +RYL 
Sbjct: 342 GHKKITRYLA 351


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 1   GHTLC 5
           GH LC
Sbjct: 402 GHALC 406


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   GHTLCSRYLV 10
           GH   +RYL 
Sbjct: 342 GHKKITRYLA 351


>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   CSRYLV 10
           C RYLV
Sbjct: 285 CPRYLV 290


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    GHTLCSRYL 9
            G  +C +YL
Sbjct: 2942 GAAICGKYL 2950


>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   CSRYLV 10
           C RYLV
Sbjct: 285 CPRYLV 290


>sp|PG068_VARV|PROTEIN OPG068|Variola virus

Query: 2  HTLCSRYLV 10
          H L  +YLV
Sbjct: 35 HVLALKYLV 43


>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  HTLCSRYLV 10
          H L  +YLV
Sbjct: 35 HVLALKYLV 43


>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  HTLCSRYLV 10
          H L  +YLV
Sbjct: 35 HVLALKYLV 43


>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)

Query: 2  HTLCSRYLV 10
          H L  +YLV
Sbjct: 35 HVLALKYLV 43




102|Sequence|506|515|SRYLVVVETC

>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 3   YLVVVETC 10
           YLV++E C
Sbjct: 601 YLVLLEAC 608


>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 2   RYLVVVE 8
           RYL V+E
Sbjct: 199 RYLTVIE 205




103|Sequence|511|520|VVETCMSLAS

>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   VETCMSLAS 10
           V+TCMS+ S
Sbjct: 152 VQTCMSVRS 160


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2   VETCMSLAS 10
           V+TCMS+ S
Sbjct: 152 VQTCMSVRS 160


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 3   ETCMSLAS 10
           E CMSL S
Sbjct: 362 EFCMSLKS 369


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 3   ETCMSLAS 10
           E CMSL S
Sbjct: 362 EFCMSLKS 369




104|Sequence|516|525|MSLASQVVKL

 ***** No hits found ******


105|Sequence|521|530|QVVKLTKQLK

>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   QVVKLTKQLK 10
           +VVKLT Q+K
Sbjct: 142 KVVKLTPQVK 151


>sp|PG097_VARV|PROTEIN OPG097|Variola virus

Query: 1   QVVKLTKQLK 10
           +VV+LT Q+K
Sbjct: 141 KVVRLTPQVK 150


>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   QVVKLTKQLK 10
           +VV+LT Q+K
Sbjct: 141 KVVRLTPQVK 150


>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)

Query: 1   QVVKLTKQLK 10
           +VV+LT Q+K
Sbjct: 136 KVVRLTPQVK 145




106|Sequence|526|535|TKQLKEQTVE

>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2    KQLKEQTVE 10
            KQL++QT++
Sbjct: 1368 KQLEDQTLD 1376




107|Sequence|531|540|EQTVERVTLQ

>sp|UL62_HCMVA|UNCHARACTERIZED protein UL62|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  EQTVERVT 8
          E+TVE+VT
Sbjct: 51 ERTVEKVT 58


>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   TVERVTL 9
           TVERVTL
Sbjct: 572 TVERVTL 578


>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   TVERVTL 9
           TVERVTL
Sbjct: 572 TVERVTL 578




108|Sequence|536|545|RVTLQNQLQQ

 ***** No hits found ******


109|Sequence|541|550|NQLQQFLEAQ

>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   LQQFLEA 9
           ++QFLEA
Sbjct: 244 IKQFLEA 250


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   LQQFLEA 9
           ++QFLEA
Sbjct: 244 IKQFLEA 250


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   LQQFLEA 9
           ++QFLEA
Sbjct: 244 IKQFLEA 250




110|Sequence|546|555|FLEAQKSEGK

 ***** No hits found ******


111|Sequence|551|560|KSEGKSLPSS

>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    KSEGKSLPS 9
            K+ GKSLP+
Sbjct: 6251 KTGGKSLPA 6259


>sp|Y104_ADE07|UNCHARACTERIZED 10.4 kDa early protein|Human adenovirus B serotype 7

Query: 2 SEGKSLPS 9
         SEGKS+P 
Sbjct: 2 SEGKSVPD 9


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 1   KSEGKSLP 8
           + EG+SLP
Sbjct: 215 QCEGESLP 222




112|Sequence|556|565|SLPSSPSSPS

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   SLPSSPSSPS 10
           SLP+SPS+PS
Sbjct: 128 SLPNSPSTPS 137


>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain

Query: 1  SLPSSPSSPS 10
          SLP+ P+SPS
Sbjct: 5  SLPADPTSPS 14


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 1   SLPSSP 6
           S+PSSP
Sbjct: 113 SMPSSP 118


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 1   SLPSSP 6
           S+PSSP
Sbjct: 113 SMPSSP 118


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 1   SLPSSP 6
           S+PSSP
Sbjct: 113 SMPSSP 118


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SLPSSPSSP 9
           SL  +PSSP
Sbjct: 524 SLTRTPSSP 532


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SLPSSPSSP 9
           SL  +PSSP
Sbjct: 524 SLTRTPSSP 532


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 5   SPSSPS 10
           +PSSPS
Sbjct: 455 TPSSPS 460


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 3   PSSPSSPS 10
           PSSPS+P 
Sbjct: 600 PSSPSAPQ 607


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 3   PSSPSSPS 10
           PSSPS+P 
Sbjct: 600 PSSPSAPQ 607


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 3   PSSPSSPS 10
           PSSPS+P 
Sbjct: 600 PSSPSAPQ 607


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 3   PSSPSSP 9
           PSSPS+P
Sbjct: 600 PSSPSAP 606


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 3   PSSPSSPS 10
           PSSPS+P 
Sbjct: 600 PSSPSAPQ 607


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 3   PSSPSSPS 10
           P  PS PS
Sbjct: 148 PGGPSGPS 155




113|Sequence|561|570|PSSPSSPASR

>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   SSPSSPASR 10
           S+PS P+SR
Sbjct: 458 STPSRPSSR 466


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 1   PSSPSSPAS 9
           P+SPS+P++
Sbjct: 130 PNSPSTPST 138


Query: 1   PSSPSSP 7
           PS+PS+P
Sbjct: 133 PSTPSTP 139


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   SSPSSPASR 10
           S PS P SR
Sbjct: 119 SKPSKPTSR 127


>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)

Query: 3   SPSSPA 8
           +PSSPA
Sbjct: 161 NPSSPA 166


>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56

Query: 1   PSSPSSPASR 10
           P+S S+PA R
Sbjct: 522 PTSTSTPAKR 531


>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15

Query: 2   SSPSSPASR 10
           S+P SPA+R
Sbjct: 140 SAPESPANR 148


>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943

Query: 4  PSSPASR 10
          PS+PASR
Sbjct: 76 PSAPASR 82


>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)

Query: 1   PSSPSSP 7
           PSSPS+P
Sbjct: 600 PSSPSAP 606


>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)

Query: 1  PSSPSSPASR 10
          PSS S PA R
Sbjct: 22 PSSCSFPAGR 31


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 1   PSSPSSP 7
           PSSPS+P
Sbjct: 600 PSSPSAP 606


>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)

Query: 1   PSSPSSP 7
           PSSPS+P
Sbjct: 600 PSSPSAP 606


>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)

Query: 1   PSSPSSP 7
           PSSPS+P
Sbjct: 600 PSSPSAP 606


>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)

Query: 1   PSSPSSP 7
           PSSPS+P
Sbjct: 600 PSSPSAP 606


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|VE4_HPV42|PROTEIN E4|Human papillomavirus 42

Query: 1  PSSPSSPA 8
          P+SP+SPA
Sbjct: 80 PASPASPA 87


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1   PSSPSSPAS 9
           P SPS  AS
Sbjct: 811 PESPSKLAS 819


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 1   PSSPSSP 7
           P+SPSSP
Sbjct: 473 PASPSSP 479


>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978

Query: 2  SSPSSPASR 10
          S  S+PASR
Sbjct: 80 SMASTPASR 88


>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978

Query: 2  SSPSSPASR 10
          S  S+PASR
Sbjct: 80 SMASTPASR 88




114|Sequence|566|575|SPASRKSQWK

>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 2   PASRKSQWK 10
           PAS +SQW+
Sbjct: 128 PASARSQWE 136


>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   SPASRKSQWK 10
           +PASR+SQ K
Sbjct: 150 NPASRRSQVK 159


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   SPASRKSQWK 10
           +PASR+ Q K
Sbjct: 151 NPASRRDQAK 160


>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P

Query: 1  SPASRKSQWK 10
          SP  R+  W+
Sbjct: 13 SPGLRRLMWR 22


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   SPASRKSQWK 10
           +PASR+ Q K
Sbjct: 151 NPASRRDQAK 160




115|Sequence|571|580|KSQWKSPDAD

>sp|UL04_HCMVM|ENVELOPE glycoprotein UL4|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  QWKSPD 8
          +WKSPD
Sbjct: 35 EWKSPD 40


>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  QWKSPD 8
          +WKSPD
Sbjct: 37 EWKSPD 42


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 4    WKSPDAD 10
            WK+PD D
Sbjct: 2306 WKAPDYD 2312


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   KSQWKSPD 8
           ++QWK PD
Sbjct: 172 QNQWKEPD 179


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   KSQWKSPD 8
           ++QWK PD
Sbjct: 162 QNQWKEPD 169


>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   KSQWKSPD 8
           ++QWK PD
Sbjct: 172 QNQWKEPD 179


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3    QWKSPD 8
            +WKSPD
Sbjct: 2306 RWKSPD 2311


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WKSPD
Sbjct: 2301 WKSPD 2305


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    WKSPDAD 10
            WK PD D
Sbjct: 2302 WKQPDYD 2308


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 3   QWKSPDA 9
           +WK PD 
Sbjct: 940 EWKDPDG 946


>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3  QWKSPD 8
          +WKSP+
Sbjct: 33 EWKSPN 38


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 3   QWKSPDA 9
           +WK PD 
Sbjct: 940 EWKDPDG 946


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 3   QWKSPDA 9
           +WK PD 
Sbjct: 940 EWKDPDG 946


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 3   QWKSPDA 9
           +WK PD 
Sbjct: 939 EWKDPDG 945


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 1   KSQWKSPDAD 10
           K +W  PD++
Sbjct: 943 KLEWSDPDSN 952


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4    WKSPDAD 10
            WK PD D
Sbjct: 2301 WKRPDYD 2307


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    WKSPDAD 10
            WK PD D
Sbjct: 2302 WKRPDYD 2308


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 2   SQWKSPD 8
           S+W SPD
Sbjct: 268 SEWCSPD 274


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKFPDA 154


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3    QWKSPD 8
            +WK+PD
Sbjct: 2306 RWKAPD 2311


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)

Query: 3   QWKSPDA 9
           +W+ PD 
Sbjct: 938 EWRDPDG 944


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 3   QWKSPDA 9
           +W+ PD 
Sbjct: 938 EWRDPDG 944


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 3   QWKSPDA 9
           +W+ PD 
Sbjct: 938 EWRDPDG 944


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 147 WKLPDA 152


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 4    WKSPD 8
            WK+PD
Sbjct: 2300 WKAPD 2304


>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)

Query: 3   QWKSPDA 9
           +W+ PD 
Sbjct: 939 EWRDPDG 945


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1    KSQWKSPDAD 10
            K QW   D D
Sbjct: 2435 KHQWNCIDCD 2444


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    KSQWKSPDAD 10
            K QW   D D
Sbjct: 2435 KHQWNCIDCD 2444


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1   KSQWKSPDAD 10
           +SQW   DA+
Sbjct: 219 ESQWNEADAN 228


>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   KSQWKSPDAD 10
           +  W+  DAD
Sbjct: 336 QKTWRQADAD 345


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2    SQWKSPDA 9
            SQW  P A
Sbjct: 1736 SQWSIPSA 1743


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 3   QWKSPDA 9
           QW +P+A
Sbjct: 463 QWDTPEA 469


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKKPD 2305


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4   WKSPDA 9
           WK PDA
Sbjct: 149 WKLPDA 154


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKKPD 2305


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKDPD 2305


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKDPD 2305


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKDPD 2305


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKDPD 2305


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKDPD 2305


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKDPD 2305


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1   KSQWKSPD 8
           +++W SPD
Sbjct: 267 EAKWCSPD 274


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4    WKSPD 8
            WK PD
Sbjct: 2304 WKKPD 2308


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2    SQWKSPDAD 10
            S W  PD D
Sbjct: 2281 SPWSWPDLD 2289


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4    WKSPD 8
            WK PD
Sbjct: 2306 WKDPD 2310


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    SQWKSPDAD 10
            S W  PD D
Sbjct: 2281 SPWSWPDLD 2289


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2    SQWKSPDAD 10
            S W  PD D
Sbjct: 2281 SPWSWPDLD 2289


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2    SQWKSPDAD 10
            S W  PD D
Sbjct: 2281 SPWSWPDLD 2289


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    SQWKSPDAD 10
            S W  PD D
Sbjct: 2281 SPWSWPDLD 2289


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1   KSQWKSPDAD 10
           K +W  PD +
Sbjct: 940 KLEWIDPDGN 949


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 3   QWKSPDA 9
           QW+ PD+
Sbjct: 261 QWQQPDS 267


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKRPD 2305


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKRPD 2305


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2    SQWKSPDAD 10
            S W  PD D
Sbjct: 2281 SPWSWPDLD 2289


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKRPD 2305


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4    WKSPD 8
            WK PD
Sbjct: 2301 WKRPD 2305


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4    WKSPD 8
            WK PD
Sbjct: 2305 WKRPD 2309


>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)

Query: 4   WKSPDAD 10
           W+ PD D
Sbjct: 662 WQEPDED 668


>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57

Query: 3  QWKSPDA 9
          QW+ PD+
Sbjct: 70 QWQQPDS 76




116|Sequence|576|585|SPDADDDSVA

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1    SPDA---DDDSV 9
            SPD+   DDDSV
Sbjct: 2803 SPDSSGLDDDSV 2814


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 3  DADDDSV 9
          D DDDS+
Sbjct: 43 DMDDDSI 49


>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  PDADDDSV 9
          PDA+DD V
Sbjct: 56 PDAEDDVV 63


>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  PDADDDSV 9
          PDA+DD V
Sbjct: 56 PDAEDDVV 63


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2    PDADDDSVA 10
            PD  DDS A
Sbjct: 2382 PDEPDDSEA 2390


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   SPDADD 6
           SPD DD
Sbjct: 111 SPDPDD 116


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   SPDADD 6
           SPD DD
Sbjct: 111 SPDPDD 116


>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)

Query: 1   SPDADDDSVA 10
           +P  DD S+A
Sbjct: 325 TPRPDDGSIA 334




117|Sequence|581|590|DDSVAKSKPG

>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    SVAKSKPG 10
            +VAK+ PG
Sbjct: 6073 TVAKAPPG 6080


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    SVAKSKPG 10
            +VAK+ PG
Sbjct: 6093 TVAKAPPG 6100


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    SVAKSKPG 10
            +VAK+ PG
Sbjct: 6123 TVAKAPPG 6130


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    SVAKSKPG 10
            +VAK+ PG
Sbjct: 6035 AVAKAPPG 6042




118|Sequence|586|595|KSKPGVQEGI

>sp|IORF_CVHOC|PROTEIN I|Human coronavirus OC43 (HCoV-OC43)

Query: 3  KPGVQE 8
          KPGV+E
Sbjct: 17 KPGVEE 22


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   SKPGVQEGI 10
           S PG  EG+
Sbjct: 530 SSPGSLEGV 538


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   SKPGVQEGI 10
           S PG  EG+
Sbjct: 530 SSPGSLEGV 538


>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8

Query: 1   KSKPGVQEGI 10
           K+K G+Q GI
Sbjct: 92  KAKEGLQIGI 101




119|Sequence|591|600|VQEGIQVLGS

>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   VQEGIQVL 8
           VQEGI+VL
Sbjct: 198 VQEGIRVL 205


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 3   EGIQVLGS 10
           EG+ VLG+
Sbjct: 323 EGVAVLGT 330


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 3   EGIQVLGS 10
           EG+ VLG+
Sbjct: 323 EGVAVLGT 330


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 3   EGIQVLGS 10
           EG+ VLG+
Sbjct: 323 EGVAVLGT 330


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 1   VQEGIQVLGS 10
           VQ GI+ LG+
Sbjct: 250 VQRGIRGLGN 259


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1   VQEGIQVLGS 10
           +  G+Q++GS
Sbjct: 849 IGRGLQLMGS 858




120|Sequence|596|605|QVLGSLSASS

>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 1   QVLGSLSASS 10
           ++LGSLS  S
Sbjct: 259 KILGSLSTVS 268




121|Sequence|601|610|LSASSRARPK

>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 3    ASSRARPK 10
            ++SRARP+
Sbjct: 2987 SASRARPR 2994


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    LSASSRA 7
            LSASSRA
Sbjct: 1335 LSASSRA 1341


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1    LSASSRA 7
            LSASSRA
Sbjct: 1335 LSASSRA 1341


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1    LSASSRA 7
            LSASSRA
Sbjct: 1335 LSASSRA 1341


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 3   ASSRARPK 10
           ASSR RP+
Sbjct: 247 ASSRPRPQ 254


>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P

Query: 1   LSASSRARPK 10
           + ASSR+ PK
Sbjct: 510 VEASSRSSPK 519




122|Sequence|606|615|RARPKAKDED

>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 2   ARPKAKDE 9
           ARPK KD+
Sbjct: 232 ARPKVKDQ 239


>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P

Query: 1   RARPKAKD 8
           RAR K KD
Sbjct: 365 RARAKVKD 372


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 4   PKAKDED 10
           PK KDE+
Sbjct: 797 PKCKDEN 803




123|Sequence|611|620|AKDEDSDKIL

>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  KDEDSDKIL 10
          KD DSD++ 
Sbjct: 75 KDADSDEVF 83


>sp|EP84_HCMVM|EARLY phosphoprotein p84|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   KDEDSDKIL 10
           +DED+D +L
Sbjct: 633 EDEDNDPLL 641


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3   DEDSDKIL 10
           ++D DKIL
Sbjct: 405 NQDPDKIL 412


>sp|PG079_VARV|PROTEIN OPG079|Variola virus

Query: 3   DEDSDK 8
           DEDSDK
Sbjct: 257 DEDSDK 262


>sp|PG079_VAR67|PROTEIN OPG079|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   DEDSDK 8
           DEDSDK
Sbjct: 257 DEDSDK 262


>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   DEDSDK 8
           DEDSDK
Sbjct: 257 DEDSDK 262


>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)

Query: 3   DEDSDK 8
           DEDSDK
Sbjct: 257 DEDSDK 262




124|Sequence|616|625|SDKILRQLLG

>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   SDKILRQLL 9
           +D +LRQLL
Sbjct: 283 TDNVLRQLL 291


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   SDKILRQLL 9
           +D +LRQLL
Sbjct: 283 TDNVLRQLL 291


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   SDKILRQLL 9
           +D +LRQLL
Sbjct: 283 TDNVLRQLL 291


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2   DKILRQLLG 10
           DK+ RQL G
Sbjct: 305 DKVCRQLHG 313


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2   DKILRQLLG 10
           DK+ RQL G
Sbjct: 305 DKVCRQLHG 313


>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)

Query: 3  KILRQLLG 10
          K+LRQLL 
Sbjct: 6  KLLRQLLA 13


>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  KILRQLLG 10
          K+LRQLL 
Sbjct: 6  KLLRQLLA 13


>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   SDKILRQLL 9
           + +ILRQLL
Sbjct: 768 TKQILRQLL 776


>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   SDKILRQLL 9
           + +ILRQLL
Sbjct: 768 TKQILRQLL 776


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 5   LRQLLG 10
           LRQLLG
Sbjct: 474 LRQLLG 479


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 5   LRQLLG 10
           LRQLLG
Sbjct: 472 LRQLLG 477


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 480 SDQILRSMKG 489


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 1   SDKILRQLLG 10
           SD+ILR + G
Sbjct: 483 SDQILRSMKG 492


>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)

Query: 1  SDKILRQLLG 10
          S +ILR +LG
Sbjct: 68 SFRILRHILG 77




125|Sequence|621|630|RQLLGKEISE

>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1    RQLLGKEISE 10
            RQLLGK  S+
Sbjct: 2021 RQLLGKFASK 2030


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1    RQLLGKEISE 10
            RQLLGK  S+
Sbjct: 2020 RQLLGKFASK 2029


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1    RQLLGKEISE 10
            RQLLGK  S+
Sbjct: 2018 RQLLGKFASK 2027


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1    RQLLGKEISE 10
            RQLLG+  S+
Sbjct: 2020 RQLLGRFASK 2029


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 1    RQLLGKEISE 10
            RQLLG+  S+
Sbjct: 2020 RQLLGRFASK 2029


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 1   RQLLGKEI 8
           R+LLGK +
Sbjct: 152 RELLGKRM 159


>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7

Query: 3  LLGKEISE 10
          ++G EISE
Sbjct: 46 VIGNEISE 53


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 2    QLLGKEIS 9
             LLG EIS
Sbjct: 2134 HLLGSEIS 2141




126|Sequence|626|635|KEISENVCTQ

>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    KEISENVCTQ 10
            +EIS NVCT+
Sbjct: 6102 REISCNVCTK 6111


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 4   SENVCT 9
           SEN CT
Sbjct: 439 SENSCT 444


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 4   SENVC 8
           SENVC
Sbjct: 309 SENVC 313




127|Sequence|631|640|NVCTQEKLSL

>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P

Query: 1  NVCTQEKLS 9
           VCT  KLS
Sbjct: 83 GVCTSRKLS 91


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  VCTQEKLSL 10
          VC  EKL+L
Sbjct: 62 VCHAEKLNL 70


>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)

Query: 1   NVCTQEKLSL 10
           N+C    LSL
Sbjct: 153 NICNSNILSL 162


>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)

Query: 1   NVCTQEKLSL 10
           N+C    LSL
Sbjct: 153 NICNSNILSL 162


>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 2  VCTQEKLS 9
          +CT+ KLS
Sbjct: 43 MCTELKLS 50


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 2  VCTQEKLSL 10
          VC  EKL+L
Sbjct: 62 VCHAEKLNL 70




128|Sequence|636|645|EKLSLEFQDA

>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus

Query: 1  EKLSLEFQD 9
          E+LS+EF D
Sbjct: 64 EELSMEFHD 72


>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate

Query: 1  EKLSLEFQD 9
          E+LS+EF D
Sbjct: 64 EELSMEFHD 72


>sp|PG087_VACCC|LATE transcription elongation factor OPG087|Vaccinia virus (strain

Query: 1  EKLSLEFQD 9
          E+LS+EF D
Sbjct: 64 EELSMEFHD 72


>sp|PG087_MONPV|LATE transcription elongation factor OPG087|Monkeypox virus (MPXV)

Query: 1  EKLSLEFQD 9
          E+LS+EF D
Sbjct: 64 EELSMEFHD 72


>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  EKLSLEFQ 8
          EK+S+EFQ
Sbjct: 80 EKVSVEFQ 87


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 1  EKLSLEFQ 8
          EK+S+EFQ
Sbjct: 80 EKVSVEFQ 87


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 2    KLSLEFQD 9
            KLSL+F D
Sbjct: 1580 KLSLKFDD 1587


>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)

Query: 3   LSLEFQDA 10
           ++LEF+DA
Sbjct: 344 VNLEFRDA 351


>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)

Query: 3   LSLEFQDA 10
           ++LEF+DA
Sbjct: 342 VNLEFRDA 349


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 4   SLEFQDA 10
           SLEFQ++
Sbjct: 613 SLEFQES 619




129|Sequence|641|650|EFQDAQASSR

>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1   EFQDAQASSR 10
           +FQDA++ ++
Sbjct: 446 QFQDAESHTQ 455


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1   EFQDAQASSR 10
           +FQDA++ ++
Sbjct: 446 QFQDAESHTQ 455


>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P

Query: 1  EFQDAQASSR 10
          +FQDAQ + R
Sbjct: 41 QFQDAQHAVR 50




130|Sequence|646|655|QASSRNSKKI

>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 4   SRNSKKI 10
           SRNSKK+
Sbjct: 116 SRNSKKV 122




131|Sequence|651|660|NSKKIPLEKR

>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 2   SKKIPLEKR 10
           SKKIP+ KR
Sbjct: 129 SKKIPIYKR 137


>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)

Query: 2   SKKIPLEKR 10
           SKKIP+ KR
Sbjct: 129 SKKIPIYKR 137


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1    NSKKIPL 7
            NSKK PL
Sbjct: 2637 NSKKTPL 2643


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 1   NSKKIPLEK 9
           NSKK+ L+K
Sbjct: 350 NSKKVYLDK 358


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 1   NSKKIPLEK 9
           NSKK+ L+K
Sbjct: 350 NSKKVYLDK 358


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2    SKKIPL 7
            SKKIP+
Sbjct: 2633 SKKIPM 2638


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   KKIPLE 8
           KK+PLE
Sbjct: 520 KKLPLE 525


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1    NSKKIPLEKR 10
            NS+K P E R
Sbjct: 1720 NSQKKPFELR 1729


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 1   NSKKIPLEKR 10
           N KK+ LEK+
Sbjct: 428 NKKKLILEKQ 437




132|Sequence|656|665|PLEKRELKLA

>sp|VP6_ROTGI|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Rat/United

Query: 2  LEKRELKLA 10
          L+KR LKLA
Sbjct: 13 LQKRVLKLA 21


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3   EKRELKLA 10
           ++RELKLA
Sbjct: 530 KERELKLA 537


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3   EKRELKLA 10
           ++RELKLA
Sbjct: 530 KERELKLA 537


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3   EKRELKLA 10
           ++RELKLA
Sbjct: 530 KERELKLA 537


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3   EKRELKLA 10
           ++RELKLA
Sbjct: 530 KERELKLA 537


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3   EKRELKLA 10
           ++RELKLA
Sbjct: 530 KERELKLA 537


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 105 EKRRLKL 111


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 3   EKRELKL 9
           EKR LKL
Sbjct: 103 EKRRLKL 109


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 3   EKRELKLA 10
           ++RELK+A
Sbjct: 519 KERELKIA 526




133|Sequence|661|670|ELKLARLRQL

>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  ELKLARLRQL 10
          +LKL  LRQL
Sbjct: 57 QLKLEILRQL 66




134|Sequence|666|675|RLRQLMQRSL

>sp|K6_HHV8P|PROTEIN K6|Human herpesvirus 8 type P

Query: 2  LRQLMQR 8
          +RQLMQR
Sbjct: 84 VRQLMQR 90


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RLRQLMQRSL 10
           R+RQ ++RSL
Sbjct: 853 RIRQGLERSL 862


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RLRQLMQRSL 10
           R+RQ ++RSL
Sbjct: 843 RIRQGLERSL 852


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RLRQLMQRSL 10
           R+RQ  +RSL
Sbjct: 835 RIRQGFERSL 844


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2   LRQLMQRSL 10
           LRQ+++RS+
Sbjct: 984 LRQIVRRSI 992


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2   LRQLMQRSL 10
           LRQ+++RS+
Sbjct: 984 LRQIVRRSI 992


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1    RLRQLMQ 7
            +LRQLM+
Sbjct: 1409 KLRQLME 1415


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    RLRQLMQ 7
            +LRQLM+
Sbjct: 1431 KLRQLME 1437


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 1    RLRQLMQ 7
            +LRQLM+
Sbjct: 1404 KLRQLME 1410




135|Sequence|671|680|MQRSLSESDT

>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2   QRSLSESD 9
           Q+S+S+SD
Sbjct: 629 QKSVSDSD 636


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2   QRSLSESD 9
           Q+S+S+SD
Sbjct: 628 QKSVSDSD 635


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 2   QRSLSESD 9
           Q+S+S+SD
Sbjct: 629 QKSVSDSD 636


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2   QRSLSESD 9
           Q+S+S+SD
Sbjct: 628 QKSVSDSD 635


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 2   QRSLSESD 9
           Q+S+S+SD
Sbjct: 628 QKSVSDSD 635


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 2   QRSLSESD 9
           Q+S+S+SD
Sbjct: 628 QKSVSDSD 635


>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human

Query: 4   SLSESDT 10
           +LSESDT
Sbjct: 219 TLSESDT 225


>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)

Query: 3   RSLSESD 9
           RS++ESD
Sbjct: 143 RSMAESD 149


>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain

Query: 2  QRSLSESDT 10
          Q  LSE+DT
Sbjct: 41 QEDLSENDT 49


>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)

Query: 3   RSLSESD 9
           RS++ESD
Sbjct: 142 RSMAESD 148




136|Sequence|676|685|SESDTDSNNS

>sp|UL125_HCMVA|UNCHARACTERIZED protein UL125|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  SESDTDS 7
          SE+DTDS
Sbjct: 21 SETDTDS 27


>sp|ORF1_VZVO|STRUCTURAL protein 1|Varicella-zoster virus (strain Oka vaccine)

Query: 1  SESDTDS 7
          S+SDTDS
Sbjct: 16 SDSDTDS 22


>sp|ORF1_VZVD|STRUCTURAL protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  SESDTDS 7
          S+SDTDS
Sbjct: 16 SDSDTDS 22


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4   DTDSNNS 10
           +TD+NN+
Sbjct: 231 ETDNNNT 237




137|Sequence|681|690|DSNNSEDPKT

>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1

Query: 3   NNSEDPKT 10
           NN EDP +
Sbjct: 103 NNLEDPAS 110


>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1

Query: 3   NNSEDPKT 10
           NN EDP +
Sbjct: 103 NNLEDPAS 110


>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1

Query: 3   NNSEDPKT 10
           NN EDP +
Sbjct: 103 NNLEDPAS 110


>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 3   NNSEDPKT 10
           NN EDP +
Sbjct: 103 NNLEDPAS 110


>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 3   NNSEDPKT 10
           NN EDP +
Sbjct: 103 NNLEDPAS 110


>sp|PG059_MONPV|PROTEIN OPG059|Monkeypox virus (MPXV)

Query: 1  DSNNSEDPK 9
          + NN ED K
Sbjct: 30 EENNEEDAK 38


>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H

Query: 3   NNSEDP 8
           NN EDP
Sbjct: 103 NNLEDP 108


>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 3   NNSEDP 8
           NN EDP
Sbjct: 103 NNLEDP 108


>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 3   NNSEDP 8
           NN EDP
Sbjct: 103 NNLEDP 108


>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 74 NNLEDPAS 81


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1    DSNNSEDPKT 10
            DS++S  PKT
Sbjct: 1584 DSDSSTPPKT 1593


>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 74 NNLEDPAS 81


>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 86 NNLEDPAS 93


>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 86 NNLEDPAS 93


>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 74 NNLEDPAS 81


>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 74 NNLEDPAS 81


>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)

Query: 4    NSEDPKT 10
            NSEDP T
Sbjct: 1150 NSEDPAT 1156


>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 86 NNLEDPAS 93


>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 74 NNLEDPAS 81


>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2

Query: 3  NNSEDPKT 10
          NN EDP +
Sbjct: 74 NNLEDPAS 81


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1418 SNNQED 1423


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2    SNNSEDP 8
            SNN+E P
Sbjct: 1064 SNNAETP 1070


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1455 SNNKED 1460


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1475 SNNKED 1480


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1418 SNNQED 1423


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2    SNNSEDP 8
            SNN+E P
Sbjct: 1064 SNNAETP 1070


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1505 SNNKED 1510


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 2    SNNSEDPK 9
            SNNS  PK
Sbjct: 1723 SNNSNKPK 1730


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1455 SNNKED 1460


>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain

Query: 1   DSNNSEDPKT 10
           +SN + DP+T
Sbjct: 98  ESNENTDPRT 107


>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2

Query: 3  NNSEDP 8
          NN EDP
Sbjct: 74 NNLEDP 79


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1475 SNNKED 1480


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    SNNSED 7
            SNN ED
Sbjct: 1505 SNNKED 1510


>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2

Query: 3  NNSEDP 8
          NN EDP
Sbjct: 74 NNLEDP 79


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2    SNNSEDP 8
            +NNSE P
Sbjct: 1063 NNNSETP 1069


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2    SNNSEDP 8
            +NNSE P
Sbjct: 1063 NNNSETP 1069


>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H

Query: 3  NNSEDP 8
          NN EDP
Sbjct: 74 NNLEDP 79




138|Sequence|686|695|EDPKTTPVRK

>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2   DPKTTP 7
           DP TTP
Sbjct: 274 DPTTTP 279


>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2   DPKTTP 7
           DP TTP
Sbjct: 274 DPTTTP 279


>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 2   DPKTTP 7
           DP TTP
Sbjct: 274 DPTTTP 279




139|Sequence|691|700|TPVRKADRPR

>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5   KADRPR 10
           KADRPR
Sbjct: 205 KADRPR 210


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5   KADRPR 10
           KADRPR
Sbjct: 205 KADRPR 210


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   KADRPR 10
           KADRPR
Sbjct: 205 KADRPR 210


>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)

Query: 1   TPVRKADRPR 10
           TP RK+ RPR
Sbjct: 114 TPPRKSKRPR 123


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   PVRKADRP 9
           P R  DRP
Sbjct: 728 PARGPDRP 735


>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human

Query: 1   TPVRKADRPR 10
           TP RK+ RPR
Sbjct: 114 TPPRKSKRPR 123


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 1   TPVRKADRP 9
           T  RK DRP
Sbjct: 478 TCCRKVDRP 486


>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)

Query: 2   PVRKADRPR 10
           P R A RPR
Sbjct: 289 PARSASRPR 297


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   TPVRKADRP 9
           +PVRKA  P
Sbjct: 268 SPVRKATYP 276


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 2  PVRKADR 8
          PV KADR
Sbjct: 30 PVNKADR 36


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 2  PVRKADR 8
          PV KADR
Sbjct: 30 PVNKADR 36


>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 2  PVRKADR 8
          PV KADR
Sbjct: 30 PVNKADR 36


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1   TPVRKADRP 9
           +PVRKA  P
Sbjct: 268 SPVRKAAYP 276


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   TPVRKADRP 9
           +PVRKA  P
Sbjct: 268 SPVRKAAYP 276




140|Sequence|696|705|ADRPRPQPIV

>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  DRPRPQP 8
          DRPRP+P
Sbjct: 40 DRPRPKP 46


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 1   ADRPRPQP 8
           A+RP PQP
Sbjct: 504 ANRPLPQP 511


Query: 2    DRPRPQP 8
            D P PQP
Sbjct: 1768 DNPFPQP 1774


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 1   ADRPRPQP 8
           A+RP PQP
Sbjct: 504 ANRPLPQP 511


Query: 2    DRPRPQP 8
            D P PQP
Sbjct: 1768 DNPFPQP 1774


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 1   ADRPRPQP 8
           A+RP PQP
Sbjct: 504 ANRPLPQP 511


Query: 2    DRPRPQP 8
            D P PQP
Sbjct: 1768 DNPFPQP 1774


>sp|VE6_HPV17|PROTEIN E6|Human papillomavirus 17

Query: 2 DRPRPQPI 9
         DRP+PQ +
Sbjct: 2 DRPKPQTV 9


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1    ADRPRPQPIV 10
            +D  RP+P+V
Sbjct: 1116 SDTSRPEPVV 1125


>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain

Query: 1   ADRPRPQPI 9
           A +P+PQP+
Sbjct: 331 AKQPKPQPV 339


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 4    PRPQPIV 10
            PRP+P+V
Sbjct: 1437 PRPEPVV 1443


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 3  RPRPQP 8
          RPRP+P
Sbjct: 29 RPRPRP 34


Query: 3  RPRPQ 7
          RPRPQ
Sbjct: 31 RPRPQ 35


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 4   PRPQPIV 10
           P P+PI+
Sbjct: 153 PHPEPII 159


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 4   PRPQPIV 10
           P P+PIV
Sbjct: 153 PHPEPIV 159


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 1   ADRPRPQPIV 10
           + RPRPQ  V
Sbjct: 248 SSRPRPQETV 257


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 3  RPRPQP 8
          RPRP+P
Sbjct: 29 RPRPRP 34


Query: 3  RPRPQ 7
          RPRPQ
Sbjct: 31 RPRPQ 35


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 3  RPRPQP 8
          RPRP+P
Sbjct: 29 RPRPRP 34


Query: 3  RPRPQ 7
          RPRPQ
Sbjct: 31 RPRPQ 35


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 4   PRPQPIV 10
           P P+PI+
Sbjct: 153 PHPEPII 159


>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   PRPQP 8
           PRP+P
Sbjct: 350 PRPRP 354


>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   PRPQP 8
           PRP+P
Sbjct: 350 PRPRP 354


>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   PRPQP 8
           PRP+P
Sbjct: 350 PRPRP 354


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   ADRPR 5
           ADRPR
Sbjct: 206 ADRPR 210


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   ADRPR 5
           ADRPR
Sbjct: 206 ADRPR 210


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   ADRPR 5
           ADRPR
Sbjct: 206 ADRPR 210


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 318 DRPTPSP 324


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 3  RPRPQP 8
          RPRP+P
Sbjct: 29 RPRPRP 34


Query: 3  RPRPQ 7
          RPRPQ
Sbjct: 31 RPRPQ 35


>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto

Query: 1   ADRPRPQ 7
            D PRP+
Sbjct: 308 GDNPRPE 314


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 1   ADRPRPQPIV 10
            DR  P P+V
Sbjct: 100 GDRITPNPLV 109


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 5   RPQPIV 10
           RP+P+V
Sbjct: 97  RPRPVV 102


>sp|EBNA5_EBVA8|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain AG876)

Query: 3   RPRPQP 8
           RPRPQP
Sbjct: 464 RPRPQP 469


>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)

Query: 4   PRPQPI 9
           PRPQP+
Sbjct: 206 PRPQPL 211


>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain

Query: 5   RPQPIV 10
           RP+P+V
Sbjct: 97  RPRPVV 102


>sp|ORF4_HEVPA|PROTEIN ORF4|Hepatitis E virus genotype 1

Query: 3   RPRPQPIV 10
           RPRP P++
Sbjct: 94  RPRPFPLI 101


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4   PRPQPI 9
           PR QPI
Sbjct: 767 PREQPI 772


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   PRPQPI 9
           PR QPI
Sbjct: 782 PREQPI 787


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1    ADRPRPQP 8
            A+RP P P
Sbjct: 1761 AERPVPAP 1768


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 5    RPQPIV 10
            RP+P+V
Sbjct: 1297 RPEPVV 1302


>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 449 DRPTPSP 455


>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 448 DRPTPSP 454


>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2   DRPRPQP 8
           DRP P P
Sbjct: 450 DRPTPSP 456


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   DRPRP 6
           DRPRP
Sbjct: 284 DRPRP 288




141|Sequence|701|710|PQPIVESVES

>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 2  QPIVESVES 10
          QPI+ES++S
Sbjct: 64 QPIIESLKS 72


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 2  QPIVESVES 10
          QPI+ES++S
Sbjct: 64 QPIIESLKS 72


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   PQPIVESVES 10
           P+P++ES+++
Sbjct: 480 PRPLIESIQA 489


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 1   PQPIVESV 8
           P P+ ES+
Sbjct: 891 PDPVTESI 898


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    PQPIVESVES 10
            P P+VE   S
Sbjct: 2665 PDPLVEGERS 2674




142|Sequence|706|715|ESVESMDSAE

>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 1   ESVESMDSAE 10
           E VES+DS E
Sbjct: 782 EFVESIDSTE 791


>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 1   ESVESMDSAE 10
           E VES+DS E
Sbjct: 781 EFVESIDSTE 790


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVETMDSS 377


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    ESVESMDSA 9
            +S+E  DSA
Sbjct: 2359 QSIEGQDSA 2367


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377


>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New

Query: 1   ESVESMDSA 9
           E+VE+MDS+
Sbjct: 369 ENVEAMDSS 377




143|Sequence|711|720|MDSAESLHLM

>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2    DSAESLHL 9
            +S+ESLHL
Sbjct: 1793 NSSESLHL 1800


>sp|YVFA_VACCC|UNCHARACTERIZED 7.1 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 MDSAESLHL 9
         MD+   LHL
Sbjct: 1 MDATAGLHL 9


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   SAESLHL 9
           SAESLH+
Sbjct: 264 SAESLHV 270


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 3   SAESLHL 9
           SAESLH+
Sbjct: 264 SAESLHV 270




144|Sequence|716|725|SLHLMIKKHT

>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1    SLHLMIKKHT 10
            S HL+ K HT
Sbjct: 1673 SRHLLNKNHT 1682


>sp|VU26_HHV7J|PROTEIN U26|Human herpesvirus 7 (strain JI)

Query: 2  LHLMIKK 8
           HLMIKK
Sbjct: 24 FHLMIKK 30




145|Sequence|721|730|IKKHTLASGG

>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P

Query: 1  IKKHTLASGG 10
          + KHTLAS G
Sbjct: 56 VLKHTLASPG 65


>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)

Query: 5   TLASGG 10
           TLASGG
Sbjct: 260 TLASGG 265


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1   IKKHTLASG 9
           IK H +A+G
Sbjct: 150 IKPHNIATG 158


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 1   IKKHTLASG 9
           IK H +ASG
Sbjct: 647 IKYHGVASG 655


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 1   IKKHTLASG 9
           IK H +ASG
Sbjct: 647 IKYHGVASG 655


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1   IKKHTLASG 9
           IK H +A+G
Sbjct: 150 IKPHHIATG 158




146|Sequence|726|735|LASGGRRFPF

>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 5   GRRFPF 10
           GRR PF
Sbjct: 140 GRRLPF 145


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 4   GGRRFP 9
           G RRFP
Sbjct: 863 GSRRFP 868


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 4   GGRRFPF 10
           GG RF F
Sbjct: 972 GGSRFTF 978


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 4   GGRRFPF 10
           GG RF F
Sbjct: 972 GGSRFTF 978


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   GGRRFPF 10
            GRR PF
Sbjct: 585 SGRRLPF 591


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   GGRRFPF 10
            GRR PF
Sbjct: 585 SGRRLPF 591


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 4   GGRRFPF 10
           GGR  PF
Sbjct: 916 GGRECPF 922


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 3   SGGRRFPF 10
           +GG +FP+
Sbjct: 402 AGGYKFPW 409


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    GGRRFPF 10
            GG  FP+
Sbjct: 1579 GGENFPY 1585


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    GGRRFPF 10
            GG  FP+
Sbjct: 1580 GGENFPY 1586


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    GGRRFPF 10
            GG  FP+
Sbjct: 1580 GGENFPY 1586


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2   ASGGRRF 8
           A+GG+R+
Sbjct: 589 ATGGKRY 595


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2   ASGGRRF 8
           A+GG+R+
Sbjct: 589 ATGGKRY 595


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2   ASGGRRF 8
           A+GG+R+
Sbjct: 589 ATGGKRY 595




147|Sequence|731|740|RRFPFSIKAS

>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1    RRFPFSIK 8
            RRFPF ++
Sbjct: 1345 RRFPFHLR 1352


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 859 RRFGFSLAA 867


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSLAA 873


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSMAA 873


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   RRFPFSIKA 9
           RRF FS+ A
Sbjct: 865 RRFGFSMAA 873


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 3   FPFSI 7
           FPFSI
Sbjct: 172 FPFSI 176


>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31

Query: 4   PFSIKAS 10
           P S+KAS
Sbjct: 109 PLSVKAS 115


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 4   PFSIKAS 10
           PF +KAS
Sbjct: 447 PFKLKAS 453


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 4   PFSIKAS 10
           PF +KAS
Sbjct: 447 PFKLKAS 453


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 4   PFSIKAS 10
           PF +KAS
Sbjct: 447 PFKLKAS 453


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 4   PFSIKAS 10
           PF +KAS
Sbjct: 447 PFKLKAS 453


>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 1  RRFPFSI 7
          R FPF++
Sbjct: 86 REFPFAV 92


>sp|ORF1_ZIKVK|UORF1 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1  RRFPFSIKAS 10
          R+F F  KAS
Sbjct: 2  RQFEFEAKAS 11


>sp|ORF1_ZIKVF|UORF1 protein|Zika virus (isolate ZIKV/Human/French

Query: 1  RRFPFSIKAS 10
          R+F F  KAS
Sbjct: 2  RQFEFEAKAS 11


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    RRFPFSIKA 9
            RR+P  +KA
Sbjct: 1101 RRYPCILKA 1109


>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)

Query: 3   FPFSIKAS 10
           F FSIKA+
Sbjct: 146 FSFSIKAN 153


>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)

Query: 3   FPFSIKAS 10
           F FSIKA+
Sbjct: 146 FSFSIKAN 153


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 546 RNFSFSLK 553


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 546 RNFSFSLK 553


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    RRFPFSIKA 9
            RR+P  +KA
Sbjct: 1101 RRYPCILKA 1109


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    RRFPFSIKA 9
            RR+P  +KA
Sbjct: 1101 RRYPCILKA 1109


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 549 RNFSFSLK 556


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 549 RNFSFSLK 556


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 549 RNFSFSLK 556


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 549 RNFSFSLK 556


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   RRFPFSIK 8
           R F FS+K
Sbjct: 547 RNFSFSLK 554




148|Sequence|736|745|SIKASKSLDG

>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   IKASKSLD 9
           IKAS SLD
Sbjct: 281 IKASLSLD 288




149|Sequence|741|750|KSLDGHSPSP

>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)

Query: 1  KSLDGHSPSP 10
          + LDG  P P
Sbjct: 8  RQLDGQKPGP 17


>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   LDGHSPSP 10
           LDG++P P
Sbjct: 286 LDGYNPHP 293


>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   LDGHSPSP 10
           LDG++P P
Sbjct: 286 LDGYNPHP 293


>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P

Query: 2   SLDGHSPSP 10
           + D HSPSP
Sbjct: 124 TTDTHSPSP 132


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 4   DGHSPSP 10
           DG +PSP
Sbjct: 126 DGAAPSP 132


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3    LDGHSPSP 10
            L+G +P+P
Sbjct: 1581 LEGQNPTP 1588


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3    LDGHSPSP 10
            L+G +P+P
Sbjct: 1581 LEGQNPTP 1588


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 2   SLDGHSPSP 10
           ++D H+P+P
Sbjct: 271 AVDPHAPTP 279


>sp|PHOSP_RABVM|PHOSPHOPROTEIN virus (strain PM) (RABV)

Query: 4  DGHSPSP 10
          DG SP+P
Sbjct: 60 DGKSPNP 66


>sp|PHOSP_RABVE|PHOSPHOPROTEIN virus (strain ERA) (RABV)

Query: 4  DGHSPSP 10
          DG SP+P
Sbjct: 60 DGKSPNP 66


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 2  SLDGHSPSP 10
          SL+G +P P
Sbjct: 47 SLEGQNPRP 55


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 4    DGHSPSP 10
            D H P+P
Sbjct: 1708 DDHQPTP 1714


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 3   LDGHSP 8
           LDGH P
Sbjct: 533 LDGHLP 538


>sp|PHOSP_RABVP|PHOSPHOPROTEIN virus (strain Pasteur vaccins

Query: 4  DGHSPSP 10
          DG SP+P
Sbjct: 60 DGKSPNP 66


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1264 GHRPAP 1269


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1250 GHRPAP 1255


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1250 GHRPAP 1255


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1250 GHRPAP 1255


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1248 GHRPAP 1253


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1265 GHRPAP 1270


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 5    GHSPSP 10
            GH P+P
Sbjct: 1265 GHRPAP 1270




150|Sequence|746|755|HSPSPTSESS

>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1    HSPSPTSE 8
            H P+PT+E
Sbjct: 1710 HQPTPTAE 1717


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2   SPSPTSES 9
           SP PT+E+
Sbjct: 448 SPGPTTEA 455


>sp|YVAL_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  HSPSPTSESS 10
          +SPS  +ESS
Sbjct: 19 NSPSQNTESS 28




151|Sequence|751|760|TSESSEPDLE

>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   TSESSEPDLE 10
           TSE   PDLE
Sbjct: 894 TSEPLRPDLE 903


>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   TSESSEPDLE 10
           TSE   PDLE
Sbjct: 897 TSEPLRPDLE 906


>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   TSESSEPDLE 10
           TSE   PDLE
Sbjct: 898 TSEPLRPDLE 907


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 2   SESSEPDL 9
           +ESS PDL
Sbjct: 120 TESSGPDL 127




152|Sequence|756|765|EPDLESQYPG

>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)

Query: 1   EPDLES 6
           EPDLES
Sbjct: 322 EPDLES 327


>sp|B17_VARV|PROTEIN B17|Variola virus

Query: 2   PDLESQYPG 10
           PD+  + PG
Sbjct: 193 PDIHKRIPG 201


>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   PDLESQYPG 10
           PD+  + PG
Sbjct: 193 PDIHKRIPG 201


>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   PDLESQYPG 10
           PD+  + PG
Sbjct: 193 PDINKRIPG 201


>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)

Query: 4   LESQYPG 10
           +E+Q+PG
Sbjct: 311 VETQWPG 317


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 1   EPDLESQ 7
           EP++ESQ
Sbjct: 772 EPEVESQ 778


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 3   DLESQYPG 10
           DLES  PG
Sbjct: 429 DLESAQPG 436


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 3   DLESQYPG 10
           DLES  PG
Sbjct: 429 DLESAQPG 436


>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 PDLESQYP 9
         PDL   YP
Sbjct: 1 PDLHLLYP 8


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1   EPDLESQ 7
           EP++ESQ
Sbjct: 772 EPEVESQ 778


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 1   EPDLESQY 8
           EPD+  QY
Sbjct: 329 EPDIAYQY 336


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1    EPDLES 6
            +PDLES
Sbjct: 2401 DPDLES 2406


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 1   EPDLESQYP 9
           EPD+  QY 
Sbjct: 327 EPDIAYQYA 335


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    EPDLES 6
            +PDLES
Sbjct: 2401 DPDLES 2406




153|Sequence|761|770|SQYPGSGSIP

>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1   SQYPGSGSI 9
           +QYP SGS+
Sbjct: 402 NQYPSSGSV 410


>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P

Query: 3   YPGSGSIP 10
           YPGSG +P
Sbjct: 249 YPGSGLMP 256


>sp|UL02_HCMVM|UNCHARACTERIZED protein UL2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  YPGSGSIP 10
          YP  GS+P
Sbjct: 17 YPSFGSLP 24


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   PGSGSIP 10
           PG+GS P
Sbjct: 375 PGAGSDP 381


>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)

Query: 4   PGSGSIP 10
           PG+G IP
Sbjct: 579 PGAGGIP 585


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   YPGSGSI 9
           YPG G +
Sbjct: 152 YPGPGRV 158


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 3   YPGSGSI 9
           YPG G +
Sbjct: 152 YPGPGRV 158


>sp|PG155_MONPZ|ENVELOPE protein OPG155|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|PG155_MONPV|ENVELOPE protein OPG155|Monkeypox virus (MPXV)

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|PG155_VARV|ENVELOPE protein OPG155|Variola virus

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|PG155_VAR67|ENVELOPE protein OPG155|Variola virus (isolate Human/India/Ind3/1967)

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|PG155_VACCC|ENVELOPE protein OPG155|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|PG155_VACCA|ENVELOPE protein OPG155|Vaccinia virus (strain Ankara) (VACV)

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|PG155_CWPXG|ENVELOPE protein OPG155|Cowpox virus (strain GRI-90 /

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 2   QYPGSGSIP 10
           + PG G+IP
Sbjct: 598 EIPGGGNIP 606


>sp|PG155_CWPXB|ENVELOPE protein OPG155|Cowpox virus (strain Brighton Red)

Query: 3  YPGSGSI 9
          YPG+G +
Sbjct: 78 YPGNGFV 84


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 5   GSGSIP 10
           G+GSIP
Sbjct: 665 GNGSIP 670


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 5  GSGSIP 10
          GSGS+P
Sbjct: 84 GSGSLP 89


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 4   PGSGSI 9
           PGSGS+
Sbjct: 421 PGSGSV 426


>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain

Query: 5  GSGSIP 10
          GSGS+P
Sbjct: 84 GSGSLP 89


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5   GSGSIP 10
           GSG++P
Sbjct: 636 GSGTVP 641


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 2    QYPGSGSI 9
            Q PG+GS+
Sbjct: 1560 QSPGAGSL 1567


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   QYPGSGS 8
           QY G GS
Sbjct: 605 QYEGDGS 611




154|Sequence|766|775|SGSIPPNQPS

>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    GSIPPNQPS 10
            G +PPN PS
Sbjct: 1949 GPVPPNPPS 1957


>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)

Query: 1   SGSIPPNQ 8
           SG+IP NQ
Sbjct: 143 SGNIPQNQ 150


>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   GSIPPN 7
           GSIPP+
Sbjct: 487 GSIPPH 492


>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)

Query: 2  GSIPPNQPS 10
          GSI P QP+
Sbjct: 16 GSIAPIQPT 24


>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)

Query: 2   GSIPPN 7
           GSIPP+
Sbjct: 498 GSIPPH 503


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    SGSIPPNQPS 10
            + + PP+QPS
Sbjct: 2364 TATAPPDQPS 2373


>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)

Query: 2   GSIPPNQPS 10
           G +PPN P+
Sbjct: 101 GDLPPNTPT 109


>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)

Query: 2   GSIPPNQPS 10
           G +PPN P+
Sbjct: 101 GDLPPNTPT 109


>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)

Query: 2   GSIPPNQPS 10
           G +PPN P+
Sbjct: 101 GDLPPNTPT 109


>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)

Query: 2  GSIPPNQPS 10
          GSI P QP+
Sbjct: 16 GSIAPIQPT 24


>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2  GSIPPNQPS 10
          GSI P QP+
Sbjct: 16 GSIAPIQPT 24


>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2  GSIPPNQPS 10
          GSI P QP+
Sbjct: 16 GSIAPIQPT 24


>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)

Query: 2  GSIPPNQPS 10
          GSI P QP+
Sbjct: 16 GSIAPTQPT 24


>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)

Query: 2  GSIPPNQPS 10
          GSI P QP+
Sbjct: 16 GSIAPIQPT 24


>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1

Query: 2  GSIPPNQPS 10
          G+IPP  PS
Sbjct: 35 GAIPPASPS 43


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    GSIPPNQPS 10
            G IPPN PS
Sbjct: 1949 GPIPPNPPS 1957


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    GSIPPNQPS 10
            G IPPN PS
Sbjct: 1949 GPIPPNPPS 1957


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    GSIPPNQPS 10
            G IPPN PS
Sbjct: 1949 GPIPPNPPS 1957


>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5

Query: 2   GSIPPNQP 9
           G +P NQP
Sbjct: 105 GFVPANQP 112


>sp|YVBA_VACCC|UNCHARACTERIZED 11.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  GSIPPNQ 8
          G IPPN 
Sbjct: 46 GKIPPNH 52


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 1   SGSIPPNQPS 10
           +G+I PN P+
Sbjct: 316 AGNITPNTPA 325


>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2

Query: 2  GSIPPNQPS 10
          G++PP+ PS
Sbjct: 35 GAVPPSSPS 43


>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   SGSIPPNQP 9
           SGS+  +QP
Sbjct: 414 SGSVDTSQP 422


>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1

Query: 2  GSIPPNQPS 10
          G++PP  PS
Sbjct: 35 GALPPASPS 43


>sp|K5_VACCC|PROTEIN K5|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  GSIPPNQP 9
          G+I PN P
Sbjct: 44 GTITPNAP 51


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   SGSIPPNQP 9
           S +IP N P
Sbjct: 476 SSTIPSNPP 484


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 1   SGSIPPNQP 9
           S +IP N P
Sbjct: 476 SSTIPSNPP 484


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 5   PPNQP 9
           PPNQP
Sbjct: 346 PPNQP 350


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 5   PPNQP 9
           PPNQP
Sbjct: 346 PPNQP 350




155|Sequence|771|780|PNQPSGDPQQ

>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   PNQPSGDPQ 9
           P  P GDP+
Sbjct: 363 PPNPGGDPE 371


>sp|YVAE_VACCC|UNCHARACTERIZED 18.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   NQPSGDP 8
           + PSGDP
Sbjct: 159 SSPSGDP 165


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1  PNQPSG 6
          PN PSG
Sbjct: 80 PNSPSG 85


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate

Query: 2  NQPSGD 7
          NQP+GD
Sbjct: 38 NQPNGD 43


>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13

Query: 1   PNQPSGDPQ 9
           P++P G+PQ
Sbjct: 246 PSRPIGNPQ 254


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1    PNQPSGDPQ 9
            PN+P+G P 
Sbjct: 2243 PNKPTGTPH 2251


Query: 1    PNQPSGDPQ 9
            P QPSG+ +
Sbjct: 2446 PTQPSGEAR 2454


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 1  PNQPSG 6
          PN P+G
Sbjct: 80 PNHPTG 85


>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   PNQPSGD 7
           PN P GD
Sbjct: 654 PNYPKGD 660


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 1  PNQPSGDPQQ 10
          PN P+G P +
Sbjct: 60 PNGPTGAPTE 69


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1  PNQPSG 6
          PN P+G
Sbjct: 80 PNSPTG 85


>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)

Query: 1   PNQPSGD 7
           PN P GD
Sbjct: 654 PNYPKGD 660


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 4    PSGDPQ 9
            P GDP+
Sbjct: 2419 PDGDPK 2424


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1    PNQPSGDPQQ 10
            P QP+  P Q
Sbjct: 1676 PEQPTAPPAQ 1685


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1    PNQPSGDPQQ 10
            P QP+  P Q
Sbjct: 1676 PEQPAAPPAQ 1685


>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13

Query: 1  PNQPSGDPQ 9
          P++P G+PQ
Sbjct: 56 PSRPIGNPQ 64


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1   PNQPSGD 7
           PN  SGD
Sbjct: 141 PNNNSGD 147


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2769 PPGDPPQ 2775


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2769 PPGDPPQ 2775


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4    PSGDP 8
            PSGDP
Sbjct: 2361 PSGDP 2365


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2   NQPSGD 7
           NQP+GD
Sbjct: 210 NQPAGD 215


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2   NQPSGD 7
           NQP+GD
Sbjct: 210 NQPAGD 215


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2   NQPSGD 7
           NQP+GD
Sbjct: 210 NQPAGD 215


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2   NQPSGD 7
           NQP+GD
Sbjct: 210 NQPAGD 215


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2769 PPGDPPQ 2775


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2   NQPSGD 7
           NQP+GD
Sbjct: 210 NQPAGD 215


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2768 PPGDPPQ 2774


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2769 PPGDPPQ 2775


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2769 PPGDPPQ 2775


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2768 PPGDPPQ 2774


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2768 PPGDPPQ 2774


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2777 PPGDPPQ 2783


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    PSGDPQQ 10
            P GDP Q
Sbjct: 2768 PPGDPPQ 2774


>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 2   NQPSGDPQ 9
           ++PS DPQ
Sbjct: 479 SEPSQDPQ 486


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 1    PNQPSGDPQQ 10
            P QP+G  Q+
Sbjct: 1756 PEQPNGAAQR 1765


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 1    PNQPSGDPQQ 10
            P QP+G  Q+
Sbjct: 1756 PEQPNGAAQR 1765


>sp|TAT_HV1H2|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  NQPSGDP 8
          +QP GDP
Sbjct: 75 SQPRGDP 81


>sp|VE7_HPV60|PROTEIN E7|Human papillomavirus type 60

Query: 4  PSGDPQQ 10
          P GDP++
Sbjct: 32 PDGDPEE 38


>sp|TAT_HV1B9|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  NQPSGDP 8
          +QP GDP
Sbjct: 74 SQPRGDP 80


>sp|TAT_HV1J3|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 2  NQPSGDP 8
          +QP GDP
Sbjct: 25 SQPRGDP 31




156|Sequence|776|785|GDPQQPSPDS

>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus

Query: 3  PQQPSPD 9
          P+ PSPD
Sbjct: 93 PESPSPD 99


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus

Query: 3  PQQPSPD 9
          P+ PSPD
Sbjct: 93 PESPSPD 99


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   DPQQPSPDS 10
           DP  PSPD+
Sbjct: 226 DPTNPSPDT 234


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   DPQQPSPDS 10
           DP  PSPD+
Sbjct: 226 DPTNPSPDT 234


>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 449 GDPQTP 454


>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 449 GDPQTP 454


>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 449 GDPQTP 454


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 450 GDPQTP 455


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 457 GDPQTP 462


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 450 GDPQTP 455


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 450 GDPQTP 455


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1    GDPQQPSPD 9
            GDP QP+ D
Sbjct: 2779 GDPPQPTYD 2787


>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 460 GDPQTP 465


>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 462 GDPQTP 467


>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 460 GDPQTP 465


>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 460 GDPQTP 465


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 460 GDPQTP 465


>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 460 GDPQTP 465


>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United

Query: 1   GDPQQP 6
           GDPQ P
Sbjct: 466 GDPQTP 471


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2771 GDPPQPEYD 2779


>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2   DPQQPSPD 9
           DP+QP+ +
Sbjct: 727 DPEQPASE 734


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2771 GDPPQPEYD 2779


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2770 GDPPQPEYD 2778


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2770 GDPPQPEYD 2778


>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain

Query: 1   GDPQQPSP 8
           GDP++P+P
Sbjct: 134 GDPREPAP 141


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2770 GDPPQPEYD 2778


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    GDPQQPSPD 9
            GDP QP  D
Sbjct: 2770 GDPPQPEYD 2778


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2    DPQQPSPDS 10
            DP QP  DS
Sbjct: 1139 DPLQPELDS 1147


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2    DPQQPSPDS 10
            DP QP  DS
Sbjct: 1121 DPLQPELDS 1129


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 1   GDPQQPS 7
           G+P++PS
Sbjct: 273 GEPKEPS 279


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 1   GDPQQPS 7
           G+P++PS
Sbjct: 273 GEPKEPS 279


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 1   GDPQQPS 7
           G+P++PS
Sbjct: 273 GEPKEPS 279


>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3  PQQPSP 8
          P+QP+P
Sbjct: 25 PEQPAP 30


>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3  PQQPSP 8
          P+QP+P
Sbjct: 25 PEQPAP 30


>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  PQQPSP 8
          P+QP+P
Sbjct: 25 PEQPAP 30


>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63

Query: 1   GDPQQP 6
           G PQQP
Sbjct: 601 GKPQQP 606


>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   PQQPSPD 9
           PQ  SPD
Sbjct: 256 PQHVSPD 262


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   PQQPSPD 9
           PQ  SPD
Sbjct: 256 PQHVSPD 262


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 2   DPQQPSPDS 10
           DP  P+P++
Sbjct: 273 DPHAPTPEA 281


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 2   DPQQPSPDS 10
           DPQQP  +S
Sbjct: 261 DPQQPDLNS 269


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1   GDPQQPS 7
           GD Q PS
Sbjct: 765 GDAQSPS 771


>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)

Query: 3  PQQPSPD 9
          PQ  SPD
Sbjct: 70 PQHTSPD 76


>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4   QQPSPDS 10
           Q+PSPDS
Sbjct: 137 QRPSPDS 143


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2    DPQQPSPDS 10
            DPQ P P +
Sbjct: 2571 DPQTPIPTT 2579


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 2   DPQQPSP 8
           DP  PSP
Sbjct: 604 DPTLPSP 610


>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4   QQPSPDS 10
           Q+PSPDS
Sbjct: 137 QRPSPDS 143


>sp|GQ2_HHV6Z|GLYCOPROTEIN Q2|Human herpesvirus 6B (strain Z29)

Query: 2   DPQQPSP 8
           DP  PSP
Sbjct: 170 DPTLPSP 176


>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4   QQPSPDS 10
           Q+PSPDS
Sbjct: 137 QRPSPDS 143


>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)

Query: 1   GDPQQPSPDS 10
            DP +PS D+
Sbjct: 208 ADPSRPSTDT 217


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1   GDPQQPSP 8
           GDP  P+P
Sbjct: 768 GDPVPPTP 775


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    DPQQPSP 8
            +P QP+P
Sbjct: 1789 NPPQPAP 1795




157|Sequence|781|790|PSPDSTAAQK

>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 1   PSPDSTAA 8
           PSPD T +
Sbjct: 96  PSPDGTPS 103


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 1   PSPDSTAA 8
           PSPD T +
Sbjct: 96  PSPDGTPS 103


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1    PSPDSTAAQK 10
            PSP  T AQ+
Sbjct: 2921 PSPQKTQAQR 2930


>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1  PSPDSTAAQK 10
          P+P+   AQK
Sbjct: 83 PTPEEMIAQK 92


>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1   PSPDSTA 7
           P+P+STA
Sbjct: 419 PTPNSTA 425




158|Sequence|786|795|TAAQKVATSP

>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)

Query: 2  AAQKVATSP 10
          AAQK+AT P
Sbjct: 70 AAQKLATKP 78




159|Sequence|791|800|VATSPKSALK

>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 1   VATSPKSALK 10
           V  +P+SALK
Sbjct: 539 VVETPRSALK 548




160|Sequence|796|805|KSALKSPSSK

>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)

Query: 1   KSALKSPSSK 10
           KSAL+ PS K
Sbjct: 96  KSALRWPSGK 105


>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)

Query: 1   KSALKSPS 8
           K ALKSP+
Sbjct: 205 KYALKSPA 212


>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   KSALKSPS 8
           K ALKSP+
Sbjct: 205 KYALKSPA 212




161|Sequence|801|810|SPSSKRRTSQ

>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 1   SPSSKRRTS 9
           +PSSK+RT 
Sbjct: 456 NPSSKKRTD 464


>sp|UL58_HCMVA|UNCHARACTERIZED protein UL58|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  SPSSKRRTS 9
          +P +KRRTS
Sbjct: 33 APPTKRRTS 41


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1  SPSSKRRT 8
          SPS  RRT
Sbjct: 24 SPSRGRRT 31


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    SPSSKRRTSQ 10
            +P +KR T+Q
Sbjct: 2854 TPKAKRGTAQ 2863


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    SPSSKRRTSQ 10
            +P +KR T+Q
Sbjct: 2855 TPKAKRGTAQ 2864


>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41

Query: 1   SPSSKRRTS 9
           SP ++RRT+
Sbjct: 253 SPKAQRRTA 261


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    SPSSKRRTSQ 10
            +P +KR T+Q
Sbjct: 2855 TPRAKRGTAQ 2864




162|Sequence|806|815|RRTSQNLKLR

>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   RRTSQNLKLR 10
           RR++++ KLR
Sbjct: 94  RRSARDAKLR 103


>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   RRTSQNLKLR 10
           RR++++ KLR
Sbjct: 95  RRSARDAKLR 104




163|Sequence|811|820|NLKLRVTFEE

>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 2   LKLRVTFEE 10
           +KLR+ +EE
Sbjct: 310 IKLRLGYEE 318


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 3    KLRVTFEE 10
            +LR  FEE
Sbjct: 1769 RLRANFEE 1776


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 2    LKLRVTFEE 10
            LKL++TF +
Sbjct: 2763 LKLKLTFNK 2771


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2    LKLRVTFEE 10
            LKL++TF +
Sbjct: 2783 LKLKLTFNK 2791


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2    LKLRVTFEE 10
            LKL++TF +
Sbjct: 2813 LKLKLTFNK 2821


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2    LKLRVTFEE 10
            LKL++TF +
Sbjct: 2763 LKLKLTFNK 2771


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2    LKLRVTFEE 10
            LKL++TF +
Sbjct: 2783 LKLKLTFNK 2791


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2    LKLRVTFEE 10
            LKL++TF +
Sbjct: 2813 LKLKLTFNK 2821


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1   NLKLRVT 7
           NLKLR++
Sbjct: 338 NLKLRIS 344




164|Sequence|816|825|VTFEEPVVQM

>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3   FEEPVVQM 10
           FEE VVQ+
Sbjct: 936 FEERVVQL 943


>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   VTFEEPVVQM 10
           VTF+ PV ++
Sbjct: 248 VTFDSPVQRL 257


>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   VTFEEPVVQM 10
           VTF+ PV ++
Sbjct: 248 VTFDSPVQRL 257


>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   VTFEEPVVQM 10
           VTF+ PV ++
Sbjct: 248 VTFDSPVQRL 257


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2    TFEEPVVQ 9
            T+E PVV 
Sbjct: 2307 TYEPPVVH 2314


>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51

Query: 1   VTFEEP 6
           +TFEEP
Sbjct: 264 ITFEEP 269


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    VTFEEPVVQM 10
            +TF +PV+ +
Sbjct: 1978 ITFGKPVIWL 1987


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1    VTFEEPVVQM 10
            +TF +PV+ +
Sbjct: 1978 ITFGKPVIWL 1987


>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43

Query: 1   VTFEEPVVQ 9
           +TFE+P V 
Sbjct: 265 LTFEQPTVH 273




165|Sequence|821|830|PVVQMEQPSL

>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 123 VVQFEQP 129


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 124 VVQFEQP 130


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 124 VVQFEQP 130


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 124 VVQFEQP 130


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 119 VVQFEQP 125


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 119 VVQFEQP 125


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 2   VVQMEQP 8
           VVQ EQP
Sbjct: 105 VVQFEQP 111


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1   PVVQMEQPSL 10
           PVV +EQ S+
Sbjct: 622 PVVTLEQKSV 631


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 1   PVVQMEQPSL 10
           PVV +EQ S+
Sbjct: 622 PVVTLEQKSV 631


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1   PVVQMEQPSL 10
           P+V +EQ S+
Sbjct: 623 PIVTLEQKSV 632


>sp|IORF_CVHN1|PROTEIN I|Human coronavirus HKU1 (isolate N1)

Query: 1  PVVQMEQPSL 10
          P+++ E+P+L
Sbjct: 30 PLIEAEKPNL 39


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 1   PVVQMEQPSL 10
           P+V +EQ S+
Sbjct: 623 PIVTLEQKSV 632




166|Sequence|826|835|EQPSLELNGE

>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  QPSLELNG 9
          +PS+ +NG
Sbjct: 18 KPSISING 25


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    EQPSLELNG 9
            E P  ELNG
Sbjct: 1035 EMPFEELNG 1043


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    EQPSLELNG 9
            E P  ELNG
Sbjct: 1035 EMPFEELNG 1043


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    QPSLELNG 9
            QPS  LNG
Sbjct: 1815 QPSKLLNG 1822


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    QPSLELNG 9
            QPS  LNG
Sbjct: 1815 QPSKLLNG 1822


>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a

Query: 2   QPSLELNG 9
           QP +E NG
Sbjct: 169 QPPVEANG 176


>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b

Query: 2   QPSLELNG 9
           QP +E NG
Sbjct: 169 QPPVEANG 176


>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)

Query: 3   PSLELN 8
           P+LELN
Sbjct: 120 PTLELN 125




167|Sequence|831|840|ELNGEKDKDK

>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   ELNGEKDKDK 10
           E  GE+D+D+
Sbjct: 722 EEGGERDRDR 731


>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   ELNGEKDKDK 10
           E  GE+D+D+
Sbjct: 734 EEGGERDRDR 743


>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P

Query: 2  LNGEKDKD 9
          L GE DKD
Sbjct: 65 LTGETDKD 72


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   ELNGEKDKDK 10
           E  GE+D+D+
Sbjct: 738 EEGGEQDRDR 747


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   ELNGEKDKDK 10
           E  GE+D+D+
Sbjct: 735 EGGGEQDRDR 744


>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)

Query: 2  LNGEKDKD 9
          L+GE D+D
Sbjct: 65 LDGEPDRD 72


>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)

Query: 2  LNGEKDKD 9
          L+GE D+D
Sbjct: 65 LDGEPDRD 72


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   ELNGEKDKDK 10
           E  GE+D+D+
Sbjct: 721 EGGGEQDRDR 730




168|Sequence|836|845|KDKDKGRTLQ

>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   KDKDKGR 7
           KDK KGR
Sbjct: 184 KDKPKGR 190


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DKDKGRTLQ 10
           D DKG+ L 
Sbjct: 641 DMDKGKMLH 649




169|Sequence|841|850|GRTLQRTSTS

>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1   GRTLQRT 7
           GR LQ+T
Sbjct: 680 GRVLQKT 686




170|Sequence|846|855|RTSTSNESGD

>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1    RTSTSNE 7
            RTSTSN+
Sbjct: 1006 RTSTSND 1012


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1    RTSTSNE 7
            RTSTSN+
Sbjct: 1005 RTSTSND 1011


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1    RTSTSNE 7
            RTSTSN+
Sbjct: 1008 RTSTSND 1014


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1   RTSTSNES 8
           RT+ SNES
Sbjct: 496 RTNASNES 503


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 4   TSNESG 9
           TSNESG
Sbjct: 156 TSNESG 161


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RTSTSNESGD 10
           +  +SN SGD
Sbjct: 179 KNESSNTSGD 188




171|Sequence|851|860|NESGDQLKRP

>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)

Query: 1   NESGDQLKRP 10
           N+SG +LK P
Sbjct: 692 NQSGTELKLP 701


>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 1   NESGDQLKRP 10
           N+SG +LK P
Sbjct: 692 NQSGTELKLP 701


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4    GDQLKRP 10
            GD L+RP
Sbjct: 5012 GDCLRRP 5018


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   ESGDQL 7
           E+GDQL
Sbjct: 488 ENGDQL 493


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NESGDQLKRP 10
           + +G Q KRP
Sbjct: 309 SSAGSQSKRP 318


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NESGDQLKRP 10
           + +G Q KRP
Sbjct: 309 SSAGSQSKRP 318


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NESGDQLKRP 10
           + +G Q KRP
Sbjct: 309 SSAGSQSKRP 318


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1   NESGDQLKR 9
           NE+ D++KR
Sbjct: 381 NENCDKVKR 389




172|Sequence|856|865|QLKRPFGAFR

>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2   LKRPFGAF 9
           LK PFGAF
Sbjct: 748 LKNPFGAF 755


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LKRPFGAF 9
           LK PFGAF
Sbjct: 748 LKNPFGAF 755


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LKRPFGAF 9
           LK PFGAF
Sbjct: 747 LKNPFGAF 754


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 4   RPFGAFR 10
           RPF  FR
Sbjct: 406 RPFPVFR 412


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   RPFGAFR 10
           RPF  FR
Sbjct: 406 RPFPVFR 412


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 5   PFGAFR 10
           PFG F+
Sbjct: 642 PFGTFK 647


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3052 KLKRAFGDY 3060


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3090 KLKRAFGDY 3098


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3110 KLKRAFGDY 3118


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3140 KLKRAFGDY 3148


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3052 KLKRAFGDY 3060


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3090 KLKRAFGDY 3098


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3110 KLKRAFGDY 3118


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    QLKRPFGAF 9
            +LKR FG +
Sbjct: 3140 KLKRAFGDY 3148


>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)

Query: 2   LKRPFGA 8
           LK PFG 
Sbjct: 680 LKNPFGG 686


>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)

Query: 2   LKRPFGA 8
           LK PFG 
Sbjct: 685 LKNPFGG 691


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   LKRPFGA 8
           LK PFG 
Sbjct: 685 LKNPFGG 691


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 2   LKRPFGA 8
           LK PFG 
Sbjct: 685 LKNPFGG 691


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1    QLKRPFGA 8
            QLK+P+ +
Sbjct: 2101 QLKKPYSS 2108


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1    QLKRPFGA 8
            QLK+P+ +
Sbjct: 2101 QLKKPYSS 2108


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1    QLKRPFGA 8
            QLK+P+ +
Sbjct: 2101 QLKKPYSS 2108


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1    QLKRPFGA 8
            QLK+P+ +
Sbjct: 2101 QLKKPYSS 2108


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1    QLKRPFGA 8
            QLK+P+ +
Sbjct: 2101 QLKKPYSS 2108


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 3   KRPFGAF 9
           + PFG+F
Sbjct: 264 EEPFGSF 270


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 3   KRPFGAF 9
           + PFG+F
Sbjct: 264 EEPFGSF 270




173|Sequence|861|870|FGAFRSIMET

>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4    FRSIMET 10
            FRS++ET
Sbjct: 2475 FRSLVET 2481


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 4    FRSIMET 10
            FRS++ET
Sbjct: 2448 FRSLVET 2454


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 4    FRSIMET 10
            FRS++ET
Sbjct: 2453 FRSLVET 2459


>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  FGAFRSIME 9
          +G+F  +ME
Sbjct: 8  YGSFDDVME 16


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2   GAFRSI 7
           GAFRS+
Sbjct: 738 GAFRSL 743


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2   GAFRSI 7
           GAFRS+
Sbjct: 734 GAFRSL 739


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2   GAFRSI 7
           GAFRS+
Sbjct: 738 GAFRSL 743


>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 1   FGAFRSIME 9
           FG FRS  E
Sbjct: 144 FGPFRSSCE 152


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   FGAFRSIME 9
           FG FRS  E
Sbjct: 144 FGPFRSSCE 152


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 2   GAFRSI 7
           GAFRS+
Sbjct: 571 GAFRSV 576




174|Sequence|866|875|SIMETLSGNQ

>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 1   SIMETLSG 8
           SI E+LSG
Sbjct: 116 SIFESLSG 123


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4  ETLSGN 9
          ETLSGN
Sbjct: 54 ETLSGN 59




175|Sequence|871|880|LSGNQNNNNN

>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2   SGNQNNNNN 10
           +GNQN   N
Sbjct: 177 TGNQNGRQN 185


>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New

Query: 1  LSGNQNNNN 9
          L+GN ++NN
Sbjct: 84 LNGNGDSNN 92




176|Sequence|876|885|NNNNNYQAAN

>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 1   NNNNNYQAAN 10
           ++N NY+A N
Sbjct: 455 SDNTNYKATN 464


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    NNNNYQA 8
            N+NNY++
Sbjct: 1426 NDNNYKS 1432


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    NNNNYQA 8
            N+NNY++
Sbjct: 1426 NDNNYKS 1432


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    NNNNYQA 8
            N+NNY++
Sbjct: 1426 NDNNYKS 1432


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2    NNNNYQA 8
            N+NNY++
Sbjct: 1426 NDNNYRS 1432


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2    NNNNYQAAN 10
            NN  +QA N
Sbjct: 995  NNRVFQAGN 1003


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2    NNNNYQAAN 10
            NN  +QA N
Sbjct: 995  NNRVFQAGN 1003




177|Sequence|881|890|YQAANQLKTS

>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1   YQAANQL 7
           YQA NQ 
Sbjct: 525 YQAVNQF 531


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1   YQAANQL 7
           YQA NQ 
Sbjct: 525 YQAVNQF 531


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   AANQLKTS 10
           +AN+L+TS
Sbjct: 128 SANKLRTS 135


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1   YQAANQLKT 9
           Y+AA  +KT
Sbjct: 369 YEAAESMKT 377




178|Sequence|886|895|QLKTSTLPLT

>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2   LKTSTLPLT 10
           LKT  LP T
Sbjct: 424 LKTEALPFT 432


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 3    KTSTLPL 9
            KTST PL
Sbjct: 2196 KTSTFPL 2202


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 3    KTSTLPL 9
            KTST PL
Sbjct: 2197 KTSTFPL 2203


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 3    KTSTLPL 9
            KTST PL
Sbjct: 2196 KTSTFPL 2202




179|Sequence|891|900|TLPLTSLGRK

>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2   LPLTSLGR 9
           LP TS+GR
Sbjct: 828 LPYTSIGR 835


>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus

Query: 2  LPLTSL 7
          LPLTSL
Sbjct: 91 LPLTSL 96


>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate

Query: 2  LPLTSL 7
          LPLTSL
Sbjct: 91 LPLTSL 96


>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain

Query: 2  LPLTSL 7
          LPLTSL
Sbjct: 91 LPLTSL 96


>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)

Query: 2  LPLTSL 7
          LPLTSL
Sbjct: 92 LPLTSL 97


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 2   LPLTSLG 8
           +PLTS+G
Sbjct: 297 VPLTSMG 303


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   LTSLGR 9
           LTSLGR
Sbjct: 493 LTSLGR 498


>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human

Query: 2   LPLTSLGRK 10
           +PL  LGR 
Sbjct: 114 IPLQDLGRD 122


>sp|REV_HV1YB|PROTEIN Rev|Human immunodeficiency virus type 1

Query: 2  LPLTSLGR 9
          LPL  LGR
Sbjct: 74 LPLPPLGR 81


>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LPLTSLGRK 10
           LP TS G K
Sbjct: 438 LPTTSAGHK 446


>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LPLTSLGRK 10
           LP TS G K
Sbjct: 438 LPTTSAGHK 446


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 2   LPLTSLGR 9
           LP  S+GR
Sbjct: 828 LPYVSIGR 835




180|Sequence|896|905|SLGRKTDAKG

>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus

Query: 1   SLGRKTDAKG 10
           S+G++TD  G
Sbjct: 138 SVGKRTDTIG 147


>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   SLGRKTDAKG 10
           S+G++TD  G
Sbjct: 138 SVGKRTDTIG 147


>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)

Query: 1   SLGRKTDAKG 10
           S+G++TD  G
Sbjct: 138 SVGKRTDTIG 147


>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SLGRKTDAKG 10
           S+G++TD  G
Sbjct: 138 SVGKRTDTIG 147


>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)

Query: 1   SLGRKTDAKG 10
           S+G++TD  G
Sbjct: 138 SVGKRTDTIG 147


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   SLGRKTDA 8
           S GR TDA
Sbjct: 134 SHGRSTDA 141


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 3   GRKTDAKG 10
           GR+ +AKG
Sbjct: 936 GREEEAKG 943


>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain

Query: 3   GRKTDAKG 10
           G +TD+KG
Sbjct: 213 GVQTDSKG 220


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 2   LGRKTDAK 9
           LGRK+D++
Sbjct: 305 LGRKSDSE 312


>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972

Query: 1   SLGRKTDAK 9
           SLG K+DA+
Sbjct: 273 SLGIKSDAQ 281


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 2   LGRKTDAK 9
           LGRK+D++
Sbjct: 305 LGRKSDSE 312




181|Sequence|901|910|TDAKGNPASS

>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)

Query: 2   DAKGNP 7
           D KGNP
Sbjct: 379 DGKGNP 384


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 1   TDAKGNPA 8
           TDAKG  A
Sbjct: 376 TDAKGKAA 383


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   TDAKGNPA 8
           TDAKG  A
Sbjct: 376 TDAKGKAA 383


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 1   TDAKGNPA 8
           TDA GN A
Sbjct: 377 TDADGNAA 384


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1   TDAKGNP 7
           TDAKG P
Sbjct: 520 TDAKGAP 526


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   AKGNPAS 9
            +GNPAS
Sbjct: 787 GEGNPAS 793


>sp|MC005_MCV1|PROTEIN MC005|Molluscum contagiosum virus subtype 1

Query: 3  AKGNPAS 9
          A+G PAS
Sbjct: 67 ARGEPAS 73




182|Sequence|906|919|NPASSASKGKNKAA

>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1   NPASSASKGKNKAA 14
           NP+  AS+G+  AA
Sbjct: 231 NPSEEASEGRKFAA 244


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1    NPASSASKGKNK 12
            NP    +KG+NK
Sbjct: 1442 NPELLVTKGENK 1453


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    PASSASK 8
            PA+SASK
Sbjct: 3725 PATSASK 3731


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    PASSASK 8
            PA+SASK
Sbjct: 3725 PATSASK 3731


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 6   ASKGKNKA 13
           A KGKN+A
Sbjct: 385 ACKGKNQA 392


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1   NPASSASKG 9
           NP+ S SKG
Sbjct: 286 NPSLSTSKG 294


Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1   NPASSASKG 9
           NP+ S SKG
Sbjct: 286 NPSLSTSKG 294


Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1   NPASSASKG 9
           NP+ S SKG
Sbjct: 286 NPSLSTSKG 294


Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 774 NPADDPSRGR 783


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 774 NPADDPSRGR 783


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 787 NPADDPSRGR 796


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADEPSRGR 794


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 774 NPADDPSRGR 783


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 774 NPADDPSRGR 783


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 787 NPADDPSRGR 796


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 780 NPADDPSRGR 789


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 774 NPADDPSRGR 783


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 787 NPADDPSRGR 796


>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1   NPASSASKG 9
           NP +S S+G
Sbjct: 775 NPCTSGSRG 783


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 787 NPADDPSRGR 796


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 780 NPADDPSRGR 789


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 787 NPADDPSRGR 796


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 780 NPADDPSRGR 789


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 787 NPADDPSRGR 796


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 785 NPADDPSRGR 794


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 774 NPADDPSRGR 783


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1   NPASSASKGK 10
           NPA   S+G+
Sbjct: 784 NPADDPSRGR 793