SEPT4_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|KAGPKNTKVM

>sp|GATD_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcoides burtonii (strain DSM

Query: 1 KAGPKN 6
KAGPKN
Sbjct: 54 KAGPKN 59


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 3 GPKNTKV 9
GPK TKV
Sbjct: 273 GPKETKV 279




2|SequenceR|15|6|ASVAVKAGPK

***** No hits found ******


3|SequenceR|20|11|ESGRQASVAV

***** No hits found ******


4|SequenceR|25|16|TNTTVESGRQ

>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NTTVESGRQ 10
NTT+E GR+
Sbjct: 420 NTTMERGRR 428


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 3 TTVESGRQ 10
TT+E+G+Q
Sbjct: 145 TTLEAGKQ 152




5|SequenceR|30|21|GQQPSTNTTV

>sp|AROE_METAC|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina acetivorans (strain ATCC

Query: 1 GQQPSTNTTV 10
G P+T+TT+
Sbjct: 198 GMHPNTDTTI 207


>sp|Y1409_METJA|UNCHARACTERIZED protein MJ1409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PSTNTTV 10
PS NTT+
Sbjct: 111 PSNNTTI 117




6|SequenceR|35|26|LVYGHGQQPS

>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVYGHGQQPS 10
L+YGHG +P+
Sbjct: 198 LIYGHGYEPT 207


>sp|GMSS_HALSA|GLUTAMATE mutase sigma subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 VYGHGQQ 8
+YGH QQ
Sbjct: 65 LYGHAQQ 71


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 2 VYGHGQQPS 10
+YGHG+ S
Sbjct: 105 LYGHGKTTS 113


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LVYGHGQQPS 10
L+Y HG+ P+
Sbjct: 27 LLYEHGEIPA 36


>sp|RADB_ARCFU|DNA repair and recombination protein|Archaeoglobus fulgidus (strain

Query: 2 VYGHG 6
+YGHG
Sbjct: 29 IYGHG 33




7|SequenceR|40|31|RHSSALVYGH

>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 HSSALVYGH 10
H S LV+GH
Sbjct: 122 HRSPLVHGH 130


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HSSALVYGH 10
HS L++GH
Sbjct: 109 HSHMLLFGH 117


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RHSSALVY 8
RH SAL Y
Sbjct: 46 RHYSALAY 53


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 HSSALVYG 9
HSS +V+G
Sbjct: 456 HSSGIVHG 463


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 HSSALVYG 9
HSS +V+G
Sbjct: 456 HSSGIVHG 463




8|SequenceR|45|36|SVAASRHSSA

>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VAASRHSSA 10
V ASRHSSA
Sbjct: 75 VFASRHSSA 83


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 2 VAASRHSS 9
V ASRHSS
Sbjct: 75 VFASRHSS 82


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SVAASRHSSA 10
+V SRHSSA
Sbjct: 61 AVVLSRHSSA 70


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 2 VAASRHSSA 10
+ SRHSSA
Sbjct: 73 IVLSRHSSA 81


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VAASRHSSA 10
V SRHSSA
Sbjct: 62 VVLSRHSSA 70




9|SequenceR|50|41|HSPNLSVAAS

>sp|YNI1_METIV|UNCHARACTERIZED protein in nifH2 5'region|Methanobacterium ivanovii

Query: 1 HSPNLSV 7
HSPNL++
Sbjct: 13 HSPNLNL 19




10|SequenceR|55|46|AESRRHSPNL

>sp|ARFB_METRM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter ruminantium (strain

Query: 1 AESRRHSPNL 10
E+RR+ PN+
Sbjct: 181 GEARRNDPNI 190


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AESRRHSPNL 10
A+ R H PNL
Sbjct: 63 AKDRLHVPNL 72


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 3 SRRHSPNL 10
S+RH+P++
Sbjct: 366 SKRHAPSM 373


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 SRRHSPNL 10
RRH PN+
Sbjct: 173 GRRHGPNV 180


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ESRRHSP 8
ES+ HSP
Sbjct: 12 ESKEHSP 18


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ESRRHSP 8
ES+ HSP
Sbjct: 12 ESKEHSP 18




11|SequenceR|60|51|TTPHAAESRR

>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 2 TPHAAESRR 10
TPHA E RR
Sbjct: 358 TPHAGEFRR 366


>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TTPHAAESRR 10
TTPH A S R
Sbjct: 275 TTPHIAASTR 284


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 TTPHAAESRR 10
TPHA E +R
Sbjct: 156 VTPHAGEFKR 165


>sp|DPHB_METBF|DIPHTHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TTPHAAESRR 10
+ PH ESRR
Sbjct: 133 SIPHPYESRR 142


>sp|NNRD_NITMS|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Nitrosopumilus maritimus (strain

Query: 2 TPHAAESRR 10
TPHA E +R
Sbjct: 157 TPHAGEFKR 165


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 TPHAAESRR 10
TPHA E R
Sbjct: 379 TPHAGEMSR 387




12|SequenceR|65|56|SASHPTTPHA

>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 1 SASHPTTPH 9
SA+HP T H
Sbjct: 53 SANHPCTVH 61


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 2 ASHPTTPHA 10
A+ PTTP A
Sbjct: 318 ANGPTTPEA 326


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SASHPTTP 8
++SHPTTP
Sbjct: 114 ASSHPTTP 121


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 SASHPTTPH 9
SA+HP T H
Sbjct: 53 SANHPCTVH 61


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 SASHPTTPH 9
SA+HP T H
Sbjct: 53 SANHPCTVH 61


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 SASHPTTPH 9
SA+HP T H
Sbjct: 53 SANHPCTVH 61


>sp|Y064_ARCFU|UNCHARACTERIZED protein AF_0064|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SHPTTPHA 10
+HP +PHA
Sbjct: 179 THPMSPHA 186


>sp|RS27_THEKO|SMALL ribosomal subunit protein eS27|Thermococcus kodakarensis (strain

Query: 3 SHPTTP 8
SHP TP
Sbjct: 31 SHPATP 36




13|SequenceR|70|61|SRPYDSASHP

>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 SRPYDSASH 9
+RPYD+ H
Sbjct: 208 ARPYDAEGH 216


>sp|ARCH_METKA|PROTEIN archease|Methanopyrus kandleri (strain AV19 /

Query: 3 PYDSASHP 10
PYD HP
Sbjct: 103 PYDPDRHP 110


>sp|GLCD1_VULM7|GLUCOSE 1-dehydrogenase 1|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 SRPYDS 6
+RPYDS
Sbjct: 206 TRPYDS 211


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 SRPYDSASH 9
S PYD H
Sbjct: 91 SEPYDEGYH 99


>sp|RS4_META3|SMALL ribosomal subunit protein uS4|Methanococcus aeolicus (strain ATCC

Query: 1 SRPYDSASHP 10
S+ YD+ +HP
Sbjct: 8 SKTYDTPNHP 17


>sp|HACB_METJA|METHANOGEN homoaconitase small subunit|Methanocaldococcus jannaschii (strain

Query: 3 PYDSASH 9
PY+ ASH
Sbjct: 30 PYELASH 36


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 2 RPYDSASHP 10
+ YD+ SHP
Sbjct: 9 KQYDTPSHP 17


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 3 PYDSASHP 10
P+D +HP
Sbjct: 312 PHDDITHP 319


>sp|AATB_META3|A-TYPE ATP synthase subunit B|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SRPYDSASHP 10
+ P+D +HP
Sbjct: 310 TMPHDDITHP 319


>sp|AATB_METKA|A-TYPE ATP synthase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 SRPYDSASHP 10
+ P+D +HP
Sbjct: 829 TMPHDDITHP 838


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PYDSASHP 10
P+D +HP
Sbjct: 310 PHDDITHP 317


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 2 RPYDSASH 9
RPY ASH
Sbjct: 425 RPYYIASH 432


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 5 DSASHP 10
DSA+HP
Sbjct: 171 DSANHP 176


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 PYDSASHP 10
P+D +HP
Sbjct: 310 PHDDITHP 317


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PYDSASHP 10
P+D +HP
Sbjct: 310 PHDDITHP 317


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SRPYDSASHP 10
+ P+D +HP
Sbjct: 308 TMPHDDITHP 317


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 1 SRPYDSASHP 10
+ P+D +HP
Sbjct: 242 TMPHDDITHP 251


>sp|RS4_METMP|SMALL ribosomal subunit protein uS4|Methanococcus maripaludis (strain

Query: 2 RPYDSASHP 10
+ YD+ +HP
Sbjct: 9 KKYDTPNHP 17




14|SequenceR|75|66|SQLSVSRPYD

***** No hits found ******


15|SequenceR|80|71|YHGPGSQLSV

>sp|LIPB1_PICTO|PROBABLE octanoyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 1 YHGPGSQLS 9
YHGPG +S
Sbjct: 76 YHGPGQLVS 84


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 YHGPGSQLSV 10
YHGPG QL V
Sbjct: 95 YHGPG-QLVV 103


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YHGPGSQ 7
YH PGSQ
Sbjct: 211 YHIPGSQ 217


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 1 YHGPGSQ 7
YHGPG +
Sbjct: 16 YHGPGKR 22


>sp|LIPB_PYRAE|PROBABLE octanoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YHGPG 5
YHGPG
Sbjct: 72 YHGPG 76


>sp|PYRE_THEKO|OROTATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 HGPGSQL 8
HG GSQL
Sbjct: 100 HGTGSQL 106


>sp|LIPB_PYRAR|PROBABLE octanoyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YHGPG 5
YHGPG
Sbjct: 72 YHGPG 76


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 HGPGSQLS 9
HG G QLS
Sbjct: 400 HGAGRQLS 407


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 4 PGSQLSV 10
PG+QLS+
Sbjct: 202 PGNQLSI 208


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 YHGPGSQLSV 10
++GPGSQ ++
Sbjct: 846 WNGPGSQPTI 855


>sp|LIPB_PYRCJ|PROBABLE octanoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YHGPGSQLS 9
YHGPG ++
Sbjct: 71 YHGPGQLVA 79


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 YHGPG 5
+HGPG
Sbjct: 210 FHGPG 214


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 1 YHGPG 5
+HGPG
Sbjct: 210 FHGPG 214


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 1 YHGPG 5
+HGPG
Sbjct: 210 FHGPG 214


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 1 YHGPG 5
+HGPG
Sbjct: 210 FHGPG 214


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 1 YHGPG 5
+HGPG
Sbjct: 210 FHGPG 214


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 HGPGSQLSV 10
HGPG ++ +
Sbjct: 516 HGPGKRILI 524


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 HGPGSQLSV 10
HGPG ++ +
Sbjct: 516 HGPGKRILI 524




16|SequenceR|85|76|PTPVAYHGPG

>sp|RL1_CENSY|LARGE ribosomal subunit protein uL1|Cenarchaeum symbiosum (strain A)

Query: 1 PTPVAYHGP 9
PTPVA++ P
Sbjct: 129 PTPVAFNAP 137


>sp|TRM1_THEAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma acidophilum

Query: 3 PVAYHGPG 10
P YHGPG
Sbjct: 13 PEVYHGPG 20


>sp|LIPB1_PICTO|PROBABLE octanoyltransferase 1|Picrophilus torridus (strain ATCC 700027

Query: 4 VAYHGPG 10
+ YHGPG
Sbjct: 74 ITYHGPG 80


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 6 YHGPG 10
YHGPG
Sbjct: 95 YHGPG 99


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 5 AYHGPG 10
A+HGPG
Sbjct: 209 AFHGPG 214


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 5 AYHGPG 10
A+HGPG
Sbjct: 209 AFHGPG 214


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 5 AYHGPG 10
A+HGPG
Sbjct: 209 AFHGPG 214


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 5 AYHGPG 10
A+HGPG
Sbjct: 209 AFHGPG 214


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 5 AYHGPG 10
A+HGPG
Sbjct: 209 AFHGPG 214


>sp|UBIX_PYRAB|FLAVIN prenyltransferase UbiX|Pyrococcus abyssi (strain GE5 /

Query: 2 TPVAYHGPG 10
+P YH PG
Sbjct: 140 SPAFYHKPG 148


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PTPVAYHGP 9
PT ++HGP
Sbjct: 189 PTVPSHHGP 197


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 PTPVAYHGP 9
PT ++HGP
Sbjct: 189 PTVPSHHGP 197


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 1 PTPVAYHGPG 10
P PV GPG
Sbjct: 359 PVPVVIRGPG 368


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 PTPVAYHGP 9
PT ++HGP
Sbjct: 189 PTVPSHHGP 197


>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PTPVAYHGP 9
PT ++HGP
Sbjct: 188 PTVPSHHGP 196


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PTPVAYHGP 9
P+PV H P
Sbjct: 191 PSPVCIHVP 199


>sp|G3P_METHJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PTPVAYHGP 9
PT ++HGP
Sbjct: 188 PTIPSHHGP 196


>sp|LIPB_PYRAE|PROBABLE octanoyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 YHGPG 10
YHGPG
Sbjct: 72 YHGPG 76


>sp|COFC_HALSA|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PVAYHG 8
PV+YHG
Sbjct: 132 PVSYHG 137


>sp|COFC_HALS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PVAYHG 8
PV+YHG
Sbjct: 132 PVSYHG 137


>sp|APGM1_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanothermobacter thermautotrophicus

Query: 1 PTPVAYHGP 9
P P+A GP
Sbjct: 357 PVPIAITGP 365


>sp|PDXT_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus onnurineus (strain

Query: 3 PVAYHG 8
P+A+HG
Sbjct: 157 PIAWHG 162


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 2 TPVAYHGPG 10
T VAY PG
Sbjct: 28 TSVAYREPG 36


>sp|RADA_IGNH4|DNA repair and recombination protein|Ignicoccus hospitalis (strain

Query: 4 VAYHGPG 10
V YH PG
Sbjct: 279 VLYHAPG 285


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 3 PVAYHGP 9
P+A++GP
Sbjct: 225 PIAWYGP 231


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 2 TPVAYHGPG 10
T VAY PG
Sbjct: 29 TSVAYREPG 37


>sp|LIPB_PYRAR|PROBABLE octanoyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 6 YHGPG 10
YHGPG
Sbjct: 72 YHGPG 76


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PTPVAYHGP 9
P PV H P
Sbjct: 191 PAPVCIHTP 199


>sp|LIPB_PYRCJ|PROBABLE octanoyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 6 YHGPG 10
YHGPG
Sbjct: 71 YHGPG 75


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum

Query: 2 TPVAYHGPG 10
T VAY PG
Sbjct: 29 TSVAYREPG 37


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis

Query: 2 TPVAYHGPG 10
T VAY PG
Sbjct: 30 TSVAYREPG 38


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 PTPVAYHG 8
PTP AY G
Sbjct: 210 PTPYAYPG 217


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PTPVAYHG 8
P P+ YHG
Sbjct: 124 PPPILYHG 131




17|SequenceR|90|81|TEPGRPTPVA

>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TEPGRPTP 8
+ PGRP+P
Sbjct: 508 SRPGRPSP 515


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TEPGRPTP 8
+ PGRP+P
Sbjct: 508 SRPGRPSP 515


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TEPGRPTP 8
+ PGRP+P
Sbjct: 508 SRPGRPSP 515


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TEPGRPTP 8
+ PGRP+P
Sbjct: 508 SRPGRPSP 515


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 3 PGRPTP 8
PGRP P
Sbjct: 37 PGRPIP 42


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 EPGRPTPVA 10
+PG P P A
Sbjct: 344 KPGEPAPTA 352


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 65 GRPTPL 70


>sp|RL2_KORCO|LARGE ribosomal subunit protein uL2|Korarchaeum cryptofilum (strain

Query: 2 EPGRPTPVA 10
EPGR TP++
Sbjct: 49 EPGRHTPIS 57


Query: 3 PGRPTPVA 10
PG+PT VA
Sbjct: 210 PGKPTTVA 217


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 2 EPGRPTPVA 10
+PG P P A
Sbjct: 344 KPGEPAPAA 352


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 TEPGRPTPV 9
T GRPTP+
Sbjct: 45 TWAGRPTPL 53


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TEPGRPTPV 9
T GRPTP+
Sbjct: 45 TWAGRPTPL 53


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 61 GRPTPL 66


>sp|RS24_PYRAB|SMALL ribosomal subunit protein eS24|Pyrococcus abyssi (strain GE5 /

Query: 3 PGRPTP 8
PG PTP
Sbjct: 26 PGEPTP 31


>sp|RS24_PYRHO|SMALL ribosomal subunit protein eS24|Pyrococcus horikoshii (strain ATCC

Query: 3 PGRPTP 8
PG PTP
Sbjct: 26 PGEPTP 31


>sp|RS24_PYRFU|SMALL ribosomal subunit protein eS24|Pyrococcus furiosus (strain ATCC

Query: 3 PGRPTP 8
PG PTP
Sbjct: 26 PGEPTP 31


>sp|RL2_META3|LARGE ribosomal subunit protein uL2|Methanococcus aeolicus (strain ATCC

Query: 2 EPGRPTPVA 10
+PGR +P+A
Sbjct: 52 DPGRSSPIA 60


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GRPTPV 9
GRPTPV
Sbjct: 210 GRPTPV 215


>sp|Y1588_METJA|UNCHARACTERIZED protein MJ1588|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TEPGRPTPV 9
T G+PTP+
Sbjct: 27 TYEGKPTPL 35


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 76 GRPTPI 81


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 76 GRPTPI 81


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


Query: 2 EPGRPTPVA 10
PGRPT ++
Sbjct: 212 HPGRPTTIS 220


>sp|RL2_METM6|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|TRPB_PICTO|TRYPTOPHAN synthase beta chain|Picrophilus torridus (strain ATCC 700027

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 78 GRPTPL 83


>sp|RL2_METMP|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|RL2_METM7|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|RL2_METM5|LARGE ribosomal subunit protein uL2|Methanococcus maripaludis (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|RL2_METVS|LARGE ribosomal subunit protein uL2|Methanococcus vannielii (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|RL2_METVA|LARGE ribosomal subunit protein uL2|Methanococcus vannielii

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRSAPVA 60


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 TEPGRPTP 8
+ PGRP+P
Sbjct: 512 SRPGRPSP 519


>sp|RL2_METS3|LARGE ribosomal subunit protein uL2|Methanobrevibacter smithii (strain

Query: 2 EPGRPTPVA 10
PGRPT V+
Sbjct: 212 HPGRPTTVS 220


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TEPGRPTPVA 10
T PG P P A
Sbjct: 124 TTPGTPKPEA 133


>sp|RL2_METTH|LARGE ribosomal subunit protein uL2|Methanothermobacter

Query: 2 EPGRPTPVA 10
PGRPT V+
Sbjct: 212 HPGRPTTVS 220


Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 52 DPGRTAPVA 60


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 EPGRPTPVA 10
EPGRP V+
Sbjct: 451 EPGRPVYVS 459


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 73 GRPTPI 78


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 73 GRPTPI 78


>sp|RL2_THEPD|LARGE ribosomal subunit protein uL2|Thermofilum pendens (strain DSM

Query: 2 EPGRPTPVA 10
EPGR P+A
Sbjct: 53 EPGRGAPLA 61


>sp|RL2_THEON|LARGE ribosomal subunit protein uL2|Thermococcus onnurineus (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 51 DPGRTAPVA 59


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPGRPTPVA 10
E G PTPV
Sbjct: 272 EDGHPTPVG 280


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 73 GRPTPL 78


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PGRPTPVA 10
P PTP+A
Sbjct: 338 PDHPTPIA 345


>sp|RL2_THEKO|LARGE ribosomal subunit protein uL2|Thermococcus kodakarensis (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 51 DPGRTAPVA 59


>sp|RL2_THEGJ|LARGE ribosomal subunit protein uL2|Thermococcus gammatolerans (strain

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 51 DPGRTAPVA 59


>sp|RL2_PYRHO|LARGE ribosomal subunit protein uL2|Pyrococcus horikoshii (strain ATCC

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 51 DPGRTAPVA 59


>sp|RL2_PYRAB|LARGE ribosomal subunit protein uL2|Pyrococcus abyssi (strain GE5 /

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 51 DPGRTAPVA 59


>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PGRPTPVA 10
PGR TP++
Sbjct: 477 PGRNTPLS 484


>sp|PTH_HALSA|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EPGRPTPVA 10
EPG PT +A
Sbjct: 85 EPGTPTALA 93


>sp|PTH_HALS3|PEPTIDYL-TRNA hydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EPGRPTPVA 10
EPG PT +A
Sbjct: 85 EPGTPTALA 93


>sp|RL2_PYRFU|LARGE ribosomal subunit protein uL2|Pyrococcus furiosus (strain ATCC

Query: 2 EPGRPTPVA 10
+PGR PVA
Sbjct: 51 DPGRTAPVA 59


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 GRPTPVA 10
G PTPVA
Sbjct: 63 GNPTPVA 69


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EPGRPTPVA 10
EPGR P A
Sbjct: 94 EPGRLAPAA 102


>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 3 PGRPTPV 9
PGR TPV
Sbjct: 45 PGRNTPV 51


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GRPTPV 9
GRPTP+
Sbjct: 72 GRPTPL 77




18|SequenceR|95|86|ETRPGTEPGR

>sp|RL22_THEVO|LARGE ribosomal subunit protein uL22|Thermoplasma volcanium (strain

Query: 3 RPGTEPGR 10
RPG PGR
Sbjct: 68 RPGKGPGR 75


>sp|RL22_THEAC|LARGE ribosomal subunit protein uL22|Thermoplasma acidophilum (strain

Query: 3 RPGTEPGR 10
RPG PGR
Sbjct: 71 RPGVGPGR 78


>sp|RL4_HALWD|LARGE ribosomal subunit protein uL4|Haloquadratum walsbyi (strain DSM

Query: 4 PGTEPGR 10
PGT+PGR
Sbjct: 227 PGTQPGR 233


>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain ATCC

Query: 4 PGTEPGR 10
PG EPGR
Sbjct: 229 PGAEPGR 235


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain ATCC

Query: 4 PGTEPGR 10
PG EPGR
Sbjct: 229 PGAEPGR 235


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 232 PGTHPGR 238


>sp|RL4_METS3|LARGE ribosomal subunit protein uL4|Methanobrevibacter smithii (strain

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 231 PGTHPGR 237


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 232 PGTHPGR 238


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 232 PGTHPGR 238


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 232 PGTHPGR 238


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 232 PGTHPGR 238


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 232 PGTHPGR 238


>sp|RL4_METTH|LARGE ribosomal subunit protein uL4|Methanothermobacter

Query: 4 PGTEPGR 10
PGT PGR
Sbjct: 231 PGTHPGR 237


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 3 RPGTEPGR 10
RPGT P R
Sbjct: 152 RPGTSPKR 159


>sp|RL4_SACI6|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 4 PGTEPGR 10
PG PGR
Sbjct: 239 PGAHPGR 245


>sp|RL4_SACI4|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 4 PGTEPGR 10
PG PGR
Sbjct: 239 PGAHPGR 245


>sp|RL4_SACI3|LARGE ribosomal subunit protein uL4|Saccharolobus islandicus (strain

Query: 4 PGTEPGR 10
PG PGR
Sbjct: 239 PGAHPGR 245


>sp|APGM_METST|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosphaera stadtmanae (strain ATCC

Query: 3 RPGTEPG 9
RPG PG
Sbjct: 49 RPGVRPG 55


>sp|RL4_SACS2|LARGE ribosomal subunit protein uL4|Saccharolobus solfataricus (strain

Query: 4 PGTEPGR 10
PG PGR
Sbjct: 239 PGAHPGR 245




19|SequenceR|100|91|SHRSSETRPG

>sp|ENO_METBF|ENOLASE barkeri (strain Fusaro /

Query: 1 SHRSSET 7
SHRS+ET
Sbjct: 372 SHRSAET 378


>sp|ENO_METMA|ENOLASE mazei (strain ATCC BAA-159

Query: 1 SHRSSET 7
SHRS+ET
Sbjct: 372 SHRSAET 378


>sp|ENO_METBU|ENOLASE burtonii (strain DSM 6242

Query: 1 SHRSSET 7
SHRS+ET
Sbjct: 369 SHRSAET 375


>sp|ENO_METAC|ENOLASE acetivorans (strain ATCC 35395

Query: 1 SHRSSET 7
SHRS+ET
Sbjct: 373 SHRSAET 379


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 SHRSSETRPG 10
SHR +E PG
Sbjct: 47 SHRYAEGLPG 56


>sp|ENO_METTP|ENOLASE thermoacetophila (strain DSM 6194

Query: 1 SHRSSET 7
SHRS+ET
Sbjct: 360 SHRSAET 366


>sp|APGM_PYRAE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SHRSSETRP 9
SHR S+T P
Sbjct: 160 SHRVSDTDP 168


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SHRSSETRP 9
SHR S+T P
Sbjct: 160 SHRVSDTDP 168


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 SHRSSETRPG 10
SHR +E PG
Sbjct: 48 SHRYAEGLPG 57


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 SHRSSETRPG 10
SHR +E PG
Sbjct: 48 SHRYAEGLPG 57


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 HRSSETRPG 10
HR +E +PG
Sbjct: 48 HRYAEGKPG 56


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 SHRSSETRPG 10
SH+ +T PG
Sbjct: 85 SHKIGKTSPG 94




20|SequenceR|105|96|KLHPSSHRSS

>sp|GFCR_METAR|TRANSCRIPTIONAL regulator GfcR|Methanocella arvoryzae (strain DSM 22066

Query: 2 LHPSSHRS 9
+HP HRS
Sbjct: 118 IHPGKHRS 125


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 1 KLHPSSHRSS 10
K+HPSS+ +S
Sbjct: 282 KIHPSSYAAS 291


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 HPSSHRS 9
HP HRS
Sbjct: 1330 HPIKHRS 1336


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 LHPSSHRS 9
L PS HRS
Sbjct: 284 LPPSKHRS 291


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 LHPSSHRS 9
L PS HRS
Sbjct: 284 LPPSKHRS 291


>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 2 LHPSSH 7
LHP SH
Sbjct: 174 LHPESH 179




21|SequenceR|110|101|QTKQSKLHPS

***** No hits found ******


22|SequenceR|115|106|HSALTQTKQS

>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 1 HSALTQTK 8
HSA+TQ K
Sbjct: 333 HSAITQFK 340




23|SequenceR|120|111|QRSSAHSALT

***** No hits found ******


24|SequenceR|125|116|PSVKWQRSSA

>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 1 PSVKWQRSSA 10
P+V+W +++A
Sbjct: 398 PAVEWGKNAA 407


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 2 SVKWQRSSA 10
SVKWQ A
Sbjct: 151 SVKWQAGVA 159


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 2 SVKWQRSSA 10
SVKWQ A
Sbjct: 151 SVKWQAGVA 159


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PSVKWQRS 8
PSV W RS
Sbjct: 421 PSVNWIRS 428


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 PSVKWQ 6
P+VKW+
Sbjct: 447 PNVKWE 452


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSVKWQ 6
P+VKW+
Sbjct: 450 PNVKWE 455




25|SequenceR|130|121|AEERPPSVKW

>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 2 EERPPSVKW 10
EE+PP+VK+
Sbjct: 312 EEKPPTVKF 320


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EERPPSVKW 10
EER P VKW
Sbjct: 515 EERTPLVKW 523


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 3 ERPPSV 8
ERPPS+
Sbjct: 327 ERPPSI 332


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 EERPPSVKW 10
E+RPP ++W
Sbjct: 564 EKRPPLLRW 572


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain

Query: 2 EERPPS 7
EE+PPS
Sbjct: 56 EEKPPS 61


>sp|MPTB_METJA|DIHYDRONEOPTERIN 2',3'-cyclic phosphate phosphodiesterase|Methanocaldococcus

Query: 2 EERPPSVKW 10
EE P S+ W
Sbjct: 42 EEAPASINW 50


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AEERPPS 7
AEERPP+
Sbjct: 703 AEERPPT 709


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 2 EERPPSVK 9
++RPPSVK
Sbjct: 4 KKRPPSVK 11


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 2 EERPPSV 8
+E+PPSV
Sbjct: 57 KEKPPSV 63


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 EERPPSVK 9
EERPP K
Sbjct: 399 EERPPQAK 406


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 AEERPPSV 8
A+ERPP +
Sbjct: 484 AKERPPFI 491


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EERPPSVKW 10
EER ++KW
Sbjct: 403 EERAEAIKW 411


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 5 PPSVKW 10
PP+ KW
Sbjct: 400 PPTTKW 405


>sp|RPO3_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermococcus kodakarensis (strain

Query: 2 EERPPSVKW 10
E+RP S+K+
Sbjct: 8 EKRPDSIKF 16


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 2 EERPPSVKW 10
EER P + W
Sbjct: 619 EERNPMIGW 627




26|SequenceR|135|126|SGRRAAEERP

>sp|THI4_PYRHO|THIAMINE thiazole synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SGRRAAEE 8
SGR+AA+E
Sbjct: 238 SGRKAAQE 245


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 3 RRAAEERP 10
RRA EE+P
Sbjct: 58 RRALEEKP 65


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GRRAAEE 8
GRRAAEE
Sbjct: 282 GRRAAEE 288


>sp|HEM3_PYRAE|PROBABLE porphobilinogen deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GRRAAEE 8
GRRAAEE
Sbjct: 282 GRRAAEE 288


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 2 GRRAAEE 8
GRRAAEE
Sbjct: 280 GRRAAEE 286


>sp|THI4_PYRIL|THIAMINE thiazole synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SGRRAAE 7
SGRRAAE
Sbjct: 240 SGRRAAE 246


>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 2 GRRAAEE 8
GRRAAEE
Sbjct: 282 GRRAAEE 288


>sp|THI4_PYRNV|THIAMINE thiazole synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SGRRAAE 7
SGRRAAE
Sbjct: 240 SGRRAAE 246


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 3 RRAAEERP 10
RRA EE+P
Sbjct: 58 RRALEEKP 65


>sp|TPIS_CENSY|TRIOSEPHOSPHATE isomerase|Cenarchaeum symbiosum (strain A)

Query: 1 SGRRAAEERP 10
SGR + ERP
Sbjct: 148 SGRSVSSERP 157


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SGRRAAEER 9
SGRR+ +ER
Sbjct: 127 SGRRSQQER 135


>sp|SRP54_PYRAB|SIGNAL recognition particle 54 kDa|Pyrococcus abyssi (strain GE5 /

Query: 3 RRAAEERP 10
RRA EE+P
Sbjct: 58 RRALEEKP 65


>sp|SRP54_PYRFU|SIGNAL recognition particle 54 kDa|Pyrococcus furiosus (strain ATCC

Query: 3 RRAAEERP 10
RRA EE+P
Sbjct: 58 RRALEEKP 65


>sp|TPIS_CENSM|TRIOSEPHOSPHATE isomerase|Cenarchaeum symbiosum

Query: 1 SGRRAAEERP 10
SGR + ERP
Sbjct: 147 SGRSVSTERP 156


>sp|SRP54_PYRHO|SIGNAL recognition particle 54 kDa|Pyrococcus horikoshii (strain ATCC

Query: 3 RRAAEERP 10
RRA EE+P
Sbjct: 58 RRALEEKP 65




27|SequenceR|140|131|GSKSESGRRA

>sp|MOAC_HALSA|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium

Query: 1 GSKSESGRRA 10
GSK ++ RRA
Sbjct: 24 GSKPDTARRA 33


>sp|MOAC_HALS3|PROBABLE cyclic pyranopterin monophosphate synthase|Halobacterium

Query: 1 GSKSESGRRA 10
GSK ++ RRA
Sbjct: 24 GSKPDTARRA 33


>sp|RL13_PYRNV|LARGE ribosomal subunit protein uL13|Pyrobaculum neutrophilum (strain DSM

Query: 3 KSESGRRA 10
++ESGRRA
Sbjct: 105 RAESGRRA 112


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 4 SESGRRA 10
SESG+RA
Sbjct: 166 SESGKRA 172


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SESGRRA 10
SESG+RA
Sbjct: 166 SESGKRA 172




28|SequenceR|145|136|HGVERGSKSE

>sp|DCD_HALLT|DCTP deaminase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HGVERGSKSE 10
+GVERGSK +
Sbjct: 166 YGVERGSKYQ 175


>sp|DCD_HALMA|DCTP deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HGVERGSKSE 10
+G ERGSK +
Sbjct: 166 YGAERGSKYQ 175


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 1 HGVERGSKSE 10
+G+ERG +E
Sbjct: 272 YGLERGESAE 281




29|SequenceR|150|141|ISSAHHGVER

>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 1 ISSAHHGVER 10
+ A+HGVER
Sbjct: 141 LEDAYHGVER 150


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ISSAHHGV 8
+ SAHHG+
Sbjct: 193 VPSAHHGM 200


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 3 SAHHGVER 10
S+H GVER
Sbjct: 219 SSHKGVER 226


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 3 SAHHGVER 10
S+H GVER
Sbjct: 219 SSHKGVER 226


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SAHHGVE 9
SAH GVE
Sbjct: 344 SAHSGVE 350


>sp|NURA_PYRFU|DNA double-strand break repair nuclease|Pyrococcus furiosus (strain

Query: 4 AHHGVE 9
AHHGV+
Sbjct: 410 AHHGVK 415


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 3 SAHHG 7
SAHHG
Sbjct: 181 SAHHG 185


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 3 SAHHG 7
SAHHG
Sbjct: 181 SAHHG 185


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 3 SAHHG 7
SAHHG
Sbjct: 181 SAHHG 185


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 3 SAHHG 7
SAHHG
Sbjct: 181 SAHHG 185


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 3 SAHHG 7
SAHHG
Sbjct: 181 SAHHG 185


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 3 SAHHG 7
SAHHG
Sbjct: 181 SAHHG 185




30|SequenceR|155|146|SKADPISSAH

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 ADPISSAH 10
ADP+ AH
Sbjct: 916 ADPVRPAH 923


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SKADPISSAH 10
SKAD I S+H
Sbjct: 643 SKADMILSSH 652




31|SequenceR|160|151|SLQHTSKADP

***** No hits found ******


32|SequenceR|165|156|KQDQFSLQHT

***** No hits found ******


33|SequenceR|170|161|SQLNNKQDQF

>sp|GCH3_SACI3|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.27)

Query: 3 LNNKQDQF 10
LNNK+D+F
Sbjct: 104 LNNKEDKF 111


>sp|GCH3_SACI7|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LNNKQDQF 10
LNNK+D+F
Sbjct: 104 LNNKEDKF 111


>sp|GCH3_SACI6|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LNNKQDQF 10
LNNK+D+F
Sbjct: 104 LNNKEDKF 111


>sp|GCH3_SACI4|GTP cyclohydrolase III|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LNNKQDQF 10
LNNK+D+F
Sbjct: 104 LNNKEDKF 111


>sp|GCH3_SACI2|GTP cyclohydrolase III|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LNNKQDQF 10
LNNK+D+F
Sbjct: 104 LNNKEDKF 111


>sp|GCH3_SACI1|GTP cyclohydrolase III|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 LNNKQDQF 10
LNNK+D+F
Sbjct: 104 LNNKEDKF 111




34|SequenceR|175|166|DELIQSQLNN

>sp|ALF1_PYRHO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DELIQSQL 8
D+L+QSQL
Sbjct: 98 DQLLQSQL 105


>sp|RL3_SULAC|LARGE ribosomal subunit protein uL3|Sulfolobus acidocaldarius (strain

Query: 2 ELIQSQLNN 10
+LIQ LNN
Sbjct: 136 DLIQKNLNN 144


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 3 LIQSQLN 9
LIQSQ+N
Sbjct: 348 LIQSQIN 354




35|SequenceR|180|171|KSPPDDELIQ

>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSPPDDELIQ 10
KSPP D+ I+
Sbjct: 189 KSPPTDKAIE 198


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 3 PPDDEL 8
PPDDEL
Sbjct: 264 PPDDEL 269


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 3 PPDDELI 9
P DDELI
Sbjct: 13 PADDELI 19


>sp|GSA_METKA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPDDELIQ 10
PPD+E ++
Sbjct: 217 PPDEEFLK 224


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPDDELIQ 10
P DDE+I+
Sbjct: 375 PVDDEIIE 382


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 PPDDELIQ 10
PPDD L++
Sbjct: 270 PPDDPLLK 277


>sp|Y1811_METBU|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcoides

Query: 1 KSPPDDELIQ 10
K+PP+D ++
Sbjct: 210 KTPPNDNILN 219


>sp|ARSD_HALSA|PUTATIVE arsenical resistance operon repressor|Halobacterium salinarum

Query: 4 PDDELIQ 10
PDDEL++
Sbjct: 22 PDDELVE 28


>sp|AROD_METM7|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 KSPPDDELIQ 10
K+P DELI+
Sbjct: 120 KTPEIDELIE 129




36|SequenceR|185|176|QPNQVKSPPD

>sp|RADA_METST|DNA repair and recombination protein|Methanosphaera stadtmanae (strain

Query: 3 NQVKSPPD 10
NQV+S PD
Sbjct: 245 NQVQSKPD 252


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 2 PNQVKSP 8
PN VK+P
Sbjct: 109 PNDVKTP 115


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 QPNQVKSPP 9
QP +++PP
Sbjct: 132 QPKTIRTPP 140


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 PNQVKSP 8
PN+ KSP
Sbjct: 344 PNETKSP 350


>sp|RADA_CENSY|DNA repair and recombination protein|Cenarchaeum symbiosum (strain A)

Query: 3 NQVKSPPD 10
NQV S PD
Sbjct: 254 NQVSSSPD 261


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 3 NQVKSPPD 10
NQV+S PD
Sbjct: 276 NQVQSNPD 283


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 3 NQVKSPPD 10
NQV+S PD
Sbjct: 276 NQVQSNPD 283


>sp|RADA_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 3 NQVKSPPD 10
NQV S PD
Sbjct: 258 NQVMSKPD 265


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 3 NQVKSPPD 10
NQV S PD
Sbjct: 276 NQVSSNPD 283




37|SequenceR|190|181|PVRVGQPNQV

>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PVRVGQP 7
PVRVG+P
Sbjct: 192 PVRVGRP 198


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum (strain

Query: 1 PVRVGQPNQV 10
PV GQP Q+
Sbjct: 91 PVNYGQPFQL 100


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum (strain

Query: 1 PVRVGQPNQV 10
PV GQP Q+
Sbjct: 91 PVNYGQPFQL 100


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RVGQPNQ 9
R+G+PN+
Sbjct: 271 RIGKPNE 277


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 RVGQPNQ 9
R+G+PN+
Sbjct: 271 RIGKPNE 277


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVRVGQP 7
PV VGQP
Sbjct: 458 PVEVGQP 464


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 PVRVGQPNQ 9
P+R+ PN+
Sbjct: 208 PIRIDLPNE 216


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 VRVGQPNQV 10
+RVG+P +V
Sbjct: 216 IRVGEPGEV 224


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 VRVGQPNQV 10
VRVG P ++
Sbjct: 259 VRVGHPTRI 267


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VRVGQPNQV 10
+ +G PN+V
Sbjct: 230 IEIGDPNRV 238


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 VRVGQPNQ 9
VR+G+P+Q
Sbjct: 114 VRLGKPHQ 121


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 4 VGQPNQV 10
V QPNQV
Sbjct: 124 VAQPNQV 130


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 1 PVRVGQPNQV 10
PVR G P V
Sbjct: 15 PVRTGSPKWV 24




38|SequenceR|195|186|SLIRRPVRVG

>sp|Y136_METHJ|UPF0280 protein Mhun_0136|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 RPVRVG 10
RPVRVG
Sbjct: 116 RPVRVG 121


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 RPVRVG 10
RPVRVG
Sbjct: 310 RPVRVG 315


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LIRRPVR 8
L+RRPVR
Sbjct: 266 LLRRPVR 272


>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 5 RPVRVG 10
RPVR+G
Sbjct: 356 RPVRIG 361


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 5 RPVRVG 10
RPVR+G
Sbjct: 314 RPVRIG 319


>sp|PELO_METLZ|PROTEIN pelota homolog|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LIRRPVRVG 10
L +RPVR+G
Sbjct: 60 LEKRPVRIG 68


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 2 LIRRPVRVG 10
L RPVR+G
Sbjct: 18 LAERPVRLG 26


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 4 RRPVRVG 10
R PVRVG
Sbjct: 557 RAPVRVG 563


>sp|PELO_METPE|PROTEIN pelota homolog|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 RRPVRVG 10
+RPVR+G
Sbjct: 60 KRPVRIG 66


>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 RRPVRVG 10
+RPVR+G
Sbjct: 60 KRPVRLG 66


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 4 RRPVRVG 10
+RPVR+G
Sbjct: 60 KRPVRLG 66




39|SequenceR|200|191|EDKPYSLIRR

>sp|PYRE_METHJ|OROTATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 DKPYSLIRR 10
DKPY +IR+
Sbjct: 81 DKPYVIIRK 89


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PYSLIRR 10
PYSL+RR
Sbjct: 57 PYSLMRR 63


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 PYSLIRR 10
PYSL+RR
Sbjct: 64 PYSLLRR 70


>sp|ARGB_METST|ACETYLGLUTAMATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DKPYSLIRR 10
D P S+IRR
Sbjct: 226 DDPESMIRR 234


>sp|HPRT_META3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 DKPYSLIRR 10
D PY++IR+
Sbjct: 75 DIPYAIIRK 83


>sp|DPCKG_PYRFU|GTP-DEPENDENT dephospho-CoA kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KPYSLIRR 10
K YSLIRR
Sbjct: 105 KAYSLIRR 112


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DKPYSLIR 9
+KPYSL++
Sbjct: 318 EKPYSLLK 325


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 2 DKPYSLIR 9
+KP++LIR
Sbjct: 126 EKPWTLIR 133


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 2 DKPYSLIRR 10
DK Y LIR+
Sbjct: 533 DKSYELIRK 541


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DKPYSL 7
DKPY+L
Sbjct: 48 DKPYTL 53


>sp|Y774_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0774|Methanocaldococcus

Query: 1 EDKPYSLIRR 10
+D+ Y LIRR
Sbjct: 245 KDESYDLIRR 254


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DKPYSLIR 9
+ PYSL+R
Sbjct: 318 ETPYSLLR 325


>sp|MPTB_METJA|DIHYDRONEOPTERIN 2',3'-cyclic phosphate phosphodiesterase|Methanocaldococcus

Query: 3 KPYSLIRR 10
KPY+ IR+
Sbjct: 100 KPYNYIRK 107


>sp|Y2318_METBF|PUTATIVE HTH-type transcriptional regulatory protein|Methanosarcina barkeri

Query: 1 EDKPYSLI 8
++KPY+L+
Sbjct: 209 QEKPYTLL 216




40|SequenceR|205|196|ETQVAEDKPY

>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 ETQVAEDK 8
ETQ+AE++
Sbjct: 11 ETQIAENR 18


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 ETQVAEDK 8
ETQ+AE++
Sbjct: 11 ETQIAENR 18




41|SequenceR|210|201|IRQIPETQVA

***** No hits found ******


42|SequenceR|215|206|ESTTTIRQIP

***** No hits found ******


43|SequenceR|220|211|RPSRIESTTT

***** No hits found ******


44|SequenceR|225|216|LLSPSRPSRI

>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 1 LLSPSRPS 8
++SP+RPS
Sbjct: 411 MISPNRPS 418


>sp|METK_METBU|S-ADENOSYLMETHIONINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LLSPSRP 7
L++PSRP
Sbjct: 292 LITPSRP 298


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 LLSPSRP 7
+L+PSRP
Sbjct: 62 ILAPSRP 68


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SPSRPSRI 10
+P+RPS+I
Sbjct: 397 NPNRPSKI 404


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 LSPSRPSRI 10
+ PS PSRI
Sbjct: 682 VEPSGPSRI 690


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 LSPSRPSRI 10
+ PS PSRI
Sbjct: 682 VEPSGPSRI 690


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 LSPSRPSRI 10
+ PS PSRI
Sbjct: 682 VEPSGPSRI 690


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SPSRPS 8
SPSRPS
Sbjct: 478 SPSRPS 483


>sp|ACDB_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit beta|Archaeoglobus fulgidus

Query: 1 LLSPSRPS 8
++SP RPS
Sbjct: 225 IVSPDRPS 232


>sp|EHAA_METTM|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 2 LSPSRPSR 9
L+P RP+R
Sbjct: 29 LAPERPAR 36


>sp|EHAA_METTH|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 2 LSPSRPSR 9
L+P RP+R
Sbjct: 29 LTPERPAR 36




45|SequenceR|230|221|SSGHELLSPS

>sp|PFDA_METAR|PREFOLDIN subunit alpha|Methanocella arvoryzae (strain DSM 22066

Query: 3 GHELLSP 9
GHELL P
Sbjct: 57 GHELLVP 63


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 1 SSGHELLSPS 10
S+G+E++SP+
Sbjct: 190 STGNEIISPN 199


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SGHELLSPS 10
SGH++L P+
Sbjct: 230 SGHKMLGPT 238


>sp|THIM_METVS|HYDROXYETHYLTHIAZOLE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SSGHELLS 8
S+GHE+LS
Sbjct: 182 SNGHEMLS 189


>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SGHELLSPS 10
SGH++L P+
Sbjct: 218 SGHKMLGPT 226


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 GHELLSP 9
GH+LL P
Sbjct: 77 GHKLLEP 83


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 4 HELLSPS 10
HELL+P+
Sbjct: 183 HELLTPT 189


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SSGHELLSP 9
SS ELLSP
Sbjct: 21 SSTRELLSP 29




46|SequenceR|235|226|DASVCSSGHE

>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 1 DASVCSSG 8
D S+CSSG
Sbjct: 132 DCSLCSSG 139


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DASVCSSGH 9
D SVC GH
Sbjct: 349 DFSVCGGGH 357


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 1 DASVCSSGHE 10
DA +C G+E
Sbjct: 194 DAKICECGNE 203


>sp|BRZ_HALUD|TRANSCRIPTIONAL regulator Brz|Halorhabdus utahensis (strain DSM 12940

Query: 2 ASVCSSGHE 10
+ CS+GHE
Sbjct: 45 PNACSNGHE 53




47|SequenceR|240|231|QATQYDASVC

>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 1 QATQYDASVC 10
Q TQYDA +C
Sbjct: 101 QITQYDAPIC 110


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 QATQYDASVC 10
Q TQYDA +C
Sbjct: 99 QITQYDAPIC 108


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 QATQYDASVC 10
Q TQYD+ +C
Sbjct: 100 QITQYDSPIC 109


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 1 QATQYDASVC 10
Q +QYDA +C
Sbjct: 100 QISQYDAPIC 109


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 QATQYDASV 9
QA Q+DAS+
Sbjct: 226 QARQFDASI 234


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 QATQYDASV 9
QA Q+DAS+
Sbjct: 226 QARQFDASI 234


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 4 QYDASVC 10
+YD SVC
Sbjct: 228 KYDVSVC 234


>sp|MALE_THELN|TREHALOSE/MALTOSE-BINDING protein MalE|Thermococcus litoralis (strain ATCC 51850

Query: 1 QATQYDASVC 10
Q QY++ VC
Sbjct: 213 QGKQYESLVC 222


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 5 YDASVC 10
YDAS C
Sbjct: 535 YDASAC 540




48|SequenceR|245|236|VPVRRQATQY

>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPVRRQATQ 9
VPV +ATQ
Sbjct: 390 VPVNEKATQ 398




49|SequenceR|250|241|TESEEVPVRR

>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TESEEVPV 8
TE+EEVP+
Sbjct: 28 TETEEVPI 35


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 4 EEVPVRR 10
EE+P+RR
Sbjct: 889 EEIPIRR 895


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TESEEVPV 8
TE+E+VPV
Sbjct: 28 TETEDVPV 35


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 TESEEVPV 8
TE+E+VPV
Sbjct: 28 TETEDVPV 35


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 1 TESEEVP 7
TES+EVP
Sbjct: 139 TESDEVP 145


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TESEEVPVRR 10
TE EE+ +RR
Sbjct: 173 TEDEELKIRR 182


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TESEEVPVRR 10
+E EEV +RR
Sbjct: 176 SEEEEVKIRR 185


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TESEEVPVRR 10
TE+ VP++R
Sbjct: 244 TETNPVPIKR 253


>sp|IF2P_METAC|PROBABLE translation initiation factor IF-2|Methanosarcina acetivorans

Query: 2 ESEEVPVRR 10
+ +EVP+R+
Sbjct: 380 QKDEVPIRK 388


>sp|IF2P_METMA|PROBABLE translation initiation factor IF-2|Methanosarcina mazei (strain

Query: 2 ESEEVPVRR 10
+ +EVP+R+
Sbjct: 374 QKDEVPIRK 382


>sp|ILVE_ARCFU|PUTATIVE branched-chain-amino-acid aminotransferase|Archaeoglobus fulgidus

Query: 1 TESEEVPV 8
TESE VP+
Sbjct: 281 TESEGVPI 288


>sp|LEUD2_METKA|3-ISOPROPYLMALATE dehydratase small subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 3 SEEVPVR 9
SEEVP+R
Sbjct: 132 SEEVPLR 138




50|SequenceR|255|246|PGYPGTESEE

>sp|CAS2A_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas2 1|Saccharolobus solfataricus (strain ATCC

Query: 2 GYPGTESEE 10
GY G+E EE
Sbjct: 87 GYSGSEREE 95


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YPGTESEE 10
YPG SEE
Sbjct: 61 YPGNPSEE 68


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PGYPGT 6
PGYPG+
Sbjct: 117 PGYPGS 122


>sp|EPDA_METMP|MINOR structural pilin EpdA|Methanococcus maripaludis (strain DSM 14266

Query: 2 GYPGTESE 9
GY GT++E
Sbjct: 61 GYNGTQTE 68


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 3 YPGTESE 9
YPG +SE
Sbjct: 305 YPGIDSE 311


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 1 PGYPG 5
PGYPG
Sbjct: 209 PGYPG 213


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GYPGTESE 9
GYPG E +
Sbjct: 544 GYPGNEDD 551


>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 3 YPGTESE 9
YPGT++E
Sbjct: 12 YPGTKNE 18


>sp|TRUA_METAR|TRNA pseudouridine synthase A|Methanocella arvoryzae (strain DSM 22066

Query: 1 PGYPGTESE 9
PG P ESE
Sbjct: 21 PGLPTVESE 29


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 PGYPGTESE 9
PG PG++ E
Sbjct: 279 PGMPGSDME 287


>sp|GATD_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C7 /

Query: 3 YPGTESE 9
YPG +SE
Sbjct: 297 YPGIDSE 303




51|SequenceR|260|251|PKSPIPGYPG

>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KSPIPGYPG 10
KS +PG PG
Sbjct: 189 KSEVPGIPG 197


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KSPIPGYP 9
K+PIPG P
Sbjct: 167 KAPIPGSP 174


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 5 IPGYPG 10
+PGYPG
Sbjct: 208 VPGYPG 213


>sp|MTRA_METFA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus fervens (strain

Query: 2 KSPIPGYP 9
KSP PG+P
Sbjct: 5 KSPAPGWP 12


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 4 PIPGYPG 10
P+PG PG
Sbjct: 16 PLPGSPG 22


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PIPGYPG 10
P+PG PG
Sbjct: 16 PLPGSPG 22


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 2 KSPIPGYPG 10
K P+PG+ G
Sbjct: 22 KHPVPGHLG 30


>sp|AROB_PYRNV|3-DEHYDROQUINATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KSPIPGYP 9
+ PIPG P
Sbjct: 39 RPPIPGAP 46


>sp|MTRA_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina barkeri (strain

Query: 2 KSPIPGYP 9
K P PG+P
Sbjct: 5 KEPAPGWP 12


>sp|AROB_PYRIL|3-DEHYDROQUINATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KSPIPGYP 9
+ PIPG P
Sbjct: 39 RPPIPGAP 46


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 KSPIPGYPG 10
K+P+PG P
Sbjct: 133 KNPVPGTPA 141


>sp|KADA_METVS|ADENYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PKSPIPGYPG 10
PK +PG P
Sbjct: 98 PKGYLPGLPA 107


>sp|KADA_METMP|ADENYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PKSPIPGYPG 10
PK +PG P
Sbjct: 98 PKGYLPGLPA 107


>sp|KADA_METM7|ADENYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 PKSPIPGYPG 10
PK +PG P
Sbjct: 98 PKGYLPGLPA 107


>sp|KADA_METM6|ADENYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 PKSPIPGYPG 10
PK +PG P
Sbjct: 98 PKGYLPGLPA 107


>sp|KADA_METM5|ADENYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 PKSPIPGYPG 10
PK +PG P
Sbjct: 98 PKGYLPGLPA 107


>sp|KADA_METJA|ADENYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKSPIPGYPG 10
PK +PG P
Sbjct: 98 PKGYLPGLPA 107


>sp|PYRE_SACS2|OROTATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 4 PIPGYP 9
P+P YP
Sbjct: 34 PLPNYP 39


>sp|KADA_METVO|ADENYLATE kinase|Methanococcus voltae

Query: 1 PKSPIPGYP 9
PK +PG P
Sbjct: 98 PKGYLPGLP 106


>sp|KADA_METTL|ADENYLATE kinase|Methanothermococcus thermolithotrophicus

Query: 1 PKSPIPGYP 9
PK +PG P
Sbjct: 98 PKGYLPGLP 106


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 IPGYPG 10
IPGYPG
Sbjct: 116 IPGYPG 121


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 3 SPIPGY 8
+P+PGY
Sbjct: 339 APLPGY 344


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PKSPIPGYPG 10
PK+ I G PG
Sbjct: 7 PKALITGTPG 16


>sp|RL10_METTH|LARGE ribosomal subunit protein uL10|Methanothermobacter

Query: 2 KSPIPGYPG 10
K+P P PG
Sbjct: 104 KTPAPAKPG 112


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 5 IPGYP 9
+PGYP
Sbjct: 137 VPGYP 141


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 5 IPGYPG 10
IP YPG
Sbjct: 100 IPAYPG 105


>sp|MTRA_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 KSPIPGYP 9
+ P PG+P
Sbjct: 5 REPAPGWP 12


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii

Query: 2 KSPIPGYP 9
+ P PG+P
Sbjct: 5 REPAPGWP 12


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 PKSPIPGYPG 10
P +PIPG P
Sbjct: 113 PANPIPGAPA 122




52|SequenceR|265|256|RYLAKPKSPI

>sp|KAE1_NANEQ|TRNA N6-adenosine threonylcarbamoyltransferase|Nanoarchaeum equitans

Query: 1 RYLAKPKSPI 10
RYLAK K P+
Sbjct: 115 RYLAKAKDPL 124


>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 RYLAKPKSPI 10
RY+ KPKS +
Sbjct: 429 RYVEKPKSTV 438


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 2 YLAKPKSPI 10
+L+ PKSP+
Sbjct: 26 WLSNPKSPV 34


>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YLAKPKSP 9
+ AKPK+P
Sbjct: 101 FYAKPKTP 108




53|SequenceR|270|261|DLNMNRYLAK

>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 2 LNMNRYL 8
LNMN+YL
Sbjct: 3 LNMNKYL 9


>sp|KCY_PYRAR|CYTIDYLATE kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 DLNMNRYLA 9
+LN RYLA
Sbjct: 129 ELNRRRYLA 137


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLNMNRYL 8
DLN+N YL
Sbjct: 310 DLNLNDYL 317




54|SequenceR|275|266|LKLLSDLNMN

>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 2 KLLSDLNMN 10
KL+ DLN+N
Sbjct: 237 KLMRDLNLN 245


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KLLSDLNMN 10
KL+ +LN+N
Sbjct: 127 KLIKELNLN 135


>sp|RS19_METHJ|SMALL ribosomal subunit protein uS19|Methanospirillum hungatei JF-1

Query: 2 KLLSDLNMN 10
KLLSD+ N
Sbjct: 56 KLLSDIRSN 64




55|SequenceR|280|271|DKLVSLKLLS

>sp|RIMK_METBU|PROBABLE alpha-L-glutamate ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DKLVSLKLLS 10
DKL SL+LLS
Sbjct: 99 DKLRSLQLLS 108


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DKLVSLKLLS 10
D+L +LKLL+
Sbjct: 100 DELATLKLLA 109




56|SequenceR|285|276|HVGDSDKLVS

>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HVGDSDKLVS 10
H GD+D++V+
Sbjct: 231 HDGDADRMVA 240


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 HVGDSDKLVS 10
H GD+D++V+
Sbjct: 238 HDGDADRMVA 247


>sp|GLMM_METMP|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 230 HDGDADRMIA 239


>sp|GLMM_METVS|PHOSPHOGLUCOSAMINE mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 230 HDGDADRMIA 239


>sp|GLMM_METM5|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C5 /

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 230 HDGDADRMIA 239


>sp|GLMM_METM7|PHOSPHOGLUCOSAMINE mutase|Methanococcus maripaludis (strain C7 /

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 230 HDGDADRMIA 239


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HVGDSDKLVS 10
H+GD D +V+
Sbjct: 111 HLGDCDIIVT 120


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 241 HDGDADRMIA 250


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 237 HDGDADRMIT 246


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 228 HDGDADRMMA 237


>sp|TRM56_METJA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocaldococcus

Query: 1 HVGDSDKLVS 10
H GD DK +S
Sbjct: 10 HRGDRDKRIS 19


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 228 HDGDADRMMA 237


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 228 HDGDADRMMA 237


>sp|RL2_METMJ|LARGE ribosomal subunit protein uL2|Methanoculleus marisnigri (strain

Query: 1 HVGDSDKLVS 10
H G +D LVS
Sbjct: 30 HAGKNDALVS 39


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HVGDSDKLV 9
H+GD D+ V
Sbjct: 119 HIGDRDRAV 127


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HVGDSDKLV 9
++GD KLV
Sbjct: 233 YIGDGSKLV 241


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HVGDSD 6
HVGD+D
Sbjct: 410 HVGDAD 415


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 233 HDGDADRMIA 242


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 HVGDSDKLV 9
H GD+D++V
Sbjct: 234 HDGDADRVV 242


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HVGDSDK 7
HV D+DK
Sbjct: 424 HVADADK 430


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HVGDSDKLV 9
++GD KLV
Sbjct: 233 YIGDGSKLV 241


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 HVGDSDKLVS 10
H GD+D++++
Sbjct: 227 HDGDADRMMA 236




57|SequenceR|290|281|RASVRHVGDS

>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 1 RASVRHVGDS 10
RAS+RH G++
Sbjct: 124 RASIRHDGET 133


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 ASVRHVGD 9
+VRHVGD
Sbjct: 222 GTVRHVGD 229


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 1 RASVRHVGD 9
+A+++H+GD
Sbjct: 25 KAALKHIGD 33


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 VRHVGDS 10
+RHVG+S
Sbjct: 373 IRHVGES 379




58|SequenceR|295|286|SEPDVRASVR

>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 SEPDVRASVR 10
S+PD+ +SVR
Sbjct: 227 SQPDLLSSVR 236


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 3 PDVRASVR 10
P++RAS+R
Sbjct: 132 PEIRASLR 139




59|SequenceR|300|291|SYKHLSEPDV

>sp|FRHD_METJA|COENZYME F420 hydrogenase subunit delta|Methanocaldococcus jannaschii

Query: 3 KHLSEPDV 10
K++SEPDV
Sbjct: 150 KYISEPDV 157


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 2 YKHLSEPDV 10
Y+H+ +PD+
Sbjct: 256 YRHIPDPDL 264


>sp|RL15_THEVO|LARGE ribosomal subunit protein uL15|Thermoplasma volcanium (strain

Query: 4 HLSEPDV 10
HLS PDV
Sbjct: 60 HLSTPDV 66


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SYKHLSEP 8
S KH SEP
Sbjct: 384 SLKHYSEP 391


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SYKHLSEPDV 10
SY H + PDV
Sbjct: 747 SYLHHTTPDV 756


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 1 SYKHLSEP 8
S KH SEP
Sbjct: 384 SLKHYSEP 391


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 SYKHLSEPDV 10
S +H+SEP V
Sbjct: 383 SIRHVSEPVV 392


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SYKHLSEPDV 10
S KH SEP V
Sbjct: 381 SIKHYSEPVV 390


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SYKHLSEPDV 10
S +H+SEP V
Sbjct: 383 SIRHVSEPVV 392


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 SYKHLSEPDV 10
S KH SEP V
Sbjct: 383 SIKHASEPVV 392


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SYKHLSEPDV 10
S +H+SEP V
Sbjct: 383 SIRHVSEPVV 392


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KHLSEP 8
KH+SEP
Sbjct: 385 KHVSEP 390


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 4 HLSEPD 9
HL EPD
Sbjct: 167 HLGEPD 172


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 SYKHLSEPDV 10
S +H+SEP V
Sbjct: 383 SIRHVSEPVV 392


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 HLSEPD 9
HL EPD
Sbjct: 186 HLEEPD 191


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SYKHLSE 7
+YKHL E
Sbjct: 84 AYKHLKE 90


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 3 KHLSEPD 9
KHL PD
Sbjct: 65 KHLQRPD 71


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 3 KHLSEPD 9
KHL PD
Sbjct: 65 KHLQRPD 71


>sp|RRP41_PYRFU|EXOSOME complex component Rrp41|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KHLSEPD 9
KHL PD
Sbjct: 65 KHLQRPD 71


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 3 KHLSEPD 9
KHL PD
Sbjct: 65 KHLQRPD 71


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KHLSEPD 9
KHL PD
Sbjct: 65 KHLQRPD 71


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 3 KHLSEPD 9
KHL PD
Sbjct: 65 KHLQRPD 71


>sp|Y1944_ARCFU|UNCHARACTERIZED protein AF_1944|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HLSEPDV 10
HLS PD+
Sbjct: 239 HLSHPDI 245


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SYKHLSEPDV 10
S +H+SEP V
Sbjct: 384 SLEHISEPVV 393


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 SYKHLSEP 8
SY H+ EP
Sbjct: 44 SYAHIDEP 51


>sp|EF2_NATPD|ELONGATION factor 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SYKHLSEP 8
S +H+SEP
Sbjct: 384 SIEHISEP 391


>sp|EF2_HALMA|ELONGATION factor 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 SYKHLSEP 8
S +H+SEP
Sbjct: 383 SIEHISEP 390




60|SequenceR|305|296|TEPYASYKHL

>sp|RIBL_METPS|FAD synthase|Methanocella paludicola (strain DSM 17711

Query: 1 TEPYASYKHL 10
T PYAS +H+
Sbjct: 121 TAPYASSRHI 130


>sp|Y091_METJA|UNCHARACTERIZED membrane protein MJ0091|Methanocaldococcus jannaschii (strain

Query: 1 TEPYASYKH 9
T YASY H
Sbjct: 57 TSAYASYMH 65


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 1 TEPYASYKH 9
TEPYA +H
Sbjct: 328 TEPYADGEH 336


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EPYASYKH 9
+PYA Y H
Sbjct: 212 DPYAGYIH 219


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 EPYASYKH 9
EP+ S KH
Sbjct: 379 EPFESIKH 386


>sp|Y600_ARCFU|UNCHARACTERIZED protein AF_0600|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYASYKHL 10
PY Y+HL
Sbjct: 58 PYKCYRHL 65


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC

Query: 1 TEPYASYK 8
T+P+A+Y+
Sbjct: 36 TDPFAAYR 43


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYASYKHL 10
PY SY H
Sbjct: 75 PYGSYTHF 82


>sp|Y2383_SULTO|UNCHARACTERIZED protein STK_23830|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EPYASYKHL 10
E Y ++KHL
Sbjct: 138 EEYTNFKHL 146


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 TEPYASY 7
T PYA+Y
Sbjct: 68 TAPYAAY 74


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 2 EPYASYKH 9
+PY YKH
Sbjct: 331 DPYYCYKH 338




61|SequenceR|310|301|KASPKTEPYA

>sp|COAD_METKA|PHOSPHOPANTETHEINE adenylyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 SPKTEPYA 10
SP+TEP A
Sbjct: 102 SPETEPVA 109


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KASPKTEPY 9
K SP EPY
Sbjct: 69 KVSPVLEPY 77




62|SequenceR|315|306|SSVLVKASPK

>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSVLVKASPK 10
SS+L +ASPK
Sbjct: 102 SSILQRASPK 111


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SSVLVKASP 9
SS+L+K+SP
Sbjct: 145 SSILIKSSP 153




63|SequenceR|320|311|NSEVQSSVLV

***** No hits found ******


64|SequenceR|325|316|IPTRVNSEVQ

>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 1 IPTRVNSEVQ 10
+PT+V +E+Q
Sbjct: 44 MPTKVETEIQ 53


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 1 IPTRVNSEVQ 10
+PT+V +E+Q
Sbjct: 44 MPTKVETEIQ 53


>sp|RL31_PICTO|LARGE ribosomal subunit protein eL31|Picrophilus torridus (strain ATCC

Query: 1 IPTRVNSEV 9
+PTRVN +V
Sbjct: 68 VPTRVNIKV 76


>sp|ASSY_METS5|ARGININOSUCCINATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IPTRVNSE 8
+P RVN E
Sbjct: 219 VPVRVNGE 226


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPTRVNSE 8
IPT++N E
Sbjct: 189 IPTKINPE 196


>sp|CDC61_ARCFU|ORC1-TYPE DNA replication protein 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TRVNSEVQ 10
TR+NSE++
Sbjct: 162 TRINSELE 169




65|SequenceR|330|321|ESNGRIPTRV

>sp|QUEE_METJA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ESNGRIPTRV 10
ESNG P R+
Sbjct: 112 ESNGMFPERI 121


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ESNGRIPTRV 10
+ NGR P RV
Sbjct: 237 QPNGRFPVRV 246


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ESNGRIPTRV 10
+ NG+ P+RV
Sbjct: 238 QPNGKFPSRV 247


>sp|HMGCS_METAR|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ESNGRIPTR 9
+ NG+ PTR
Sbjct: 235 QPNGKFPTR 243


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ESNGRIPTR 9
+ NG+ PTR
Sbjct: 235 QPNGKFPTR 243


>sp|HMGCS_THEVO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ESNGRIPTR 9
+ NG+ PTR
Sbjct: 235 QPNGKFPTR 243


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ESNGRI 6
ESNGRI
Sbjct: 599 ESNGRI 604


>sp|HMGCS_PICTO|HYDROXYMETHYLGLUTARYL-COA synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 ESNGRIPTRV 10
+ NG+ PTR
Sbjct: 235 QPNGKFPTRA 244


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ESNGRIPTR 9
+ NGR P R
Sbjct: 236 QPNGRFPVR 244


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ESNGRIPTR 9
+ NGR P R
Sbjct: 237 QPNGRFPVR 245


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ESNGRIPTRV 10
+ NG+ P RV
Sbjct: 235 QPNGKFPVRV 244


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ESNGRIPTR 9
+ NGR P R
Sbjct: 237 QPNGRFPVR 245


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ESNGRIPTR 9
+ NGR P R
Sbjct: 237 QPNGRFPVR 245


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 5 RIPTRV 10
RIPTRV
Sbjct: 244 RIPTRV 249


>sp|SYT_CALMQ|THREONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ESNGRIP 7
E+NG++P
Sbjct: 486 EANGKVP 492




66|SequenceR|335|326|VRRGVESNGR

>sp|TRPF_METTP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VRRGVESNGR 10
V GVE+NGR
Sbjct: 182 VSSGVETNGR 191


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GVESNG 9
GVESNG
Sbjct: 649 GVESNG 654


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GVESNG 9
GVESNG
Sbjct: 682 GVESNG 687


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 GVESNG 9
GVESNG
Sbjct: 651 GVESNG 656


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 GVESNG 9
GVESNG
Sbjct: 632 GVESNG 637


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 GVESNG 9
GVESNG
Sbjct: 652 GVESNG 657


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GVESNG 9
GVESNG
Sbjct: 679 GVESNG 684


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GVESNG 9
GVESNG
Sbjct: 659 GVESNG 664


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 1 VRRGVESNGR 10
+RR +ES G+
Sbjct: 407 IRRHIESTGQ 416


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VRRGVESNG 9
+RR +ESNG
Sbjct: 319 LRRIIESNG 327


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GVESNG 9
GVESNG
Sbjct: 711 GVESNG 716


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GVESNG 9
GVESNG
Sbjct: 668 GVESNG 673


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GVESNG 9
G+ESNG
Sbjct: 1350 GIESNG 1355


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GVESNG 9
G+ESNG
Sbjct: 634 GIESNG 639


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GVESNG 9
G+ESNG
Sbjct: 173 GIESNG 178


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 VRRGVESNG 9
++RGV +NG
Sbjct: 102 IQRGVTANG 110


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM

Query: 1 VRRGVESNG 9
+RRGVE G
Sbjct: 15 IRRGVEMGG 23


>sp|Y1980_AERPE|PROTEIN APE_1980.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VRRGVESNG 9
VRRGVE G
Sbjct: 251 VRRGVEELG 259


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RGVESNG 9
RGVES+G
Sbjct: 50 RGVESHG 56


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VRRGVESNG 9
VRRG+E+ G
Sbjct: 171 VRRGLEALG 179




67|SequenceR|340|331|GPSITVRRGV

>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GPSITVRRGV 10
GP++TV RGV
Sbjct: 260 GPAVTVCRGV 269


>sp|Y900_METJA|UNCHARACTERIZED protein MJ0900|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPSITVRR 8
GPS T+R+
Sbjct: 259 GPSFTIRK 266


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 2 PSITVRR 8
PS+TVRR
Sbjct: 173 PSVTVRR 179


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 2 PSITVRRGV 10
P++ VRRG+
Sbjct: 323 PTVEVRRGL 331


>sp|POK_METJA|PANTOATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPSITVRRGV 10
G IT+ RGV
Sbjct: 26 GAGITIDRGV 35


>sp|RS3_HYPBU|SMALL ribosomal subunit protein uS3|Hyperthermus butylicus (strain DSM

Query: 1 GPSITVRR 8
P ITVRR
Sbjct: 78 NPQITVRR 85


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PSITVRRGV 10
PS +RRG+
Sbjct: 43 PSFLMRRGI 51


>sp|KHSE_METJA|HOMOSERINE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GPSITVRRGV 10
G IT+++GV
Sbjct: 76 GVKITIKKGV 85




68|SequenceR|345|336|EVSQVGPSIT

>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 1 EVSQVGPSI 9
E+S VGP++
Sbjct: 233 EISTVGPTL 241


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVSQVGPS 8
EVSQ+G S
Sbjct: 791 EVSQIGSS 798


>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 EVSQVGPSI 9
E+S VGP++
Sbjct: 233 EISTVGPTL 241




69|SequenceR|350|341|VHHTPEVSQV

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHHTPEVSQV 10
+H+TP V +V
Sbjct: 539 IHYTPRVPEV 548


>sp|AROD_METS3|3-DEHYDROQUINATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HHTPEVSQV 10
H TPE++++
Sbjct: 123 HKTPEINEI 131


>sp|LYSY_PICTO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 HTPEVSQ 9
HTPE+ Q
Sbjct: 209 HTPEIEQ 215


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 1 VHHTPEVSQV 10
VHHTP+ S +
Sbjct: 166 VHHTPKGSTI 175


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HTPEVSQV 10
HTPE Q+
Sbjct: 371 HTPEFEQL 378


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 HTPEVSQV 10
HTPE Q+
Sbjct: 368 HTPEFEQL 375


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 HTPEVSQV 10
HTPE Q+
Sbjct: 368 HTPEFEQL 375


>sp|RIFK_IGNH4|RIBOFLAVIN kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HHTPEVSQV 10
HH PE+ ++
Sbjct: 148 HHPPEIIEL 156


>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum aerophilum

Query: 1 VHHTPEVSQ 9
++ TP+VSQ
Sbjct: 186 INETPKVSQ 194


>sp|FER2_HALMA|FERREDOXIN-2 marismortui (strain ATCC 43049

Query: 1 VHHTPEVSQV 10
+ H PEVS++
Sbjct: 115 LKHLPEVSEL 124


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HHTPEVSQ 9
HTPE+ Q
Sbjct: 202 RHTPEIRQ 209


>sp|PEPQ_PYRHO|XAA-PRO dipeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VHHTPEVSQ 9
VH P VSQ
Sbjct: 293 VHEWPRVSQ 301


>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 1 VHHTPEV 7
+HH PEV
Sbjct: 60 LHHPPEV 66


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HHTPEVS 8
HH PE S
Sbjct: 206 HHVPEAS 212


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVKTV 202


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HHTPEVSQV 10
HH P+V+ +
Sbjct: 193 HHGPDVNTI 201


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HHTPEVSQV 10
HH P+V+ +
Sbjct: 193 HHGPDVNTI 201


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVQTV 202


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVQTV 202


>sp|G3P_META3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVGTV 202


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVQTV 202


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 2 HHTPEVSQV 10
HH VSQ+
Sbjct: 49 HHASHVSQI 57


>sp|G3P_PYRAR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVKTV 202


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_ARCFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 195 HHGPDVKTV 203


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 194 HHGPDVKSV 202


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 191 HHGPDVQTV 199


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 191 HHGPDVQTV 199


>sp|HIS1_HALSA|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 VHHTPEVSQV 10
VH P+V QV
Sbjct: 188 VHDDPKVQQV 197


>sp|HIS1_HALS3|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 VHHTPEVSQV 10
VH P+V QV
Sbjct: 188 VHDDPKVQQV 197


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HHTPEVSQV 10
HHTP S +
Sbjct: 122 HHTPNTSYI 130


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HHTPEVSQV 10
HH P+V V
Sbjct: 191 HHGPDVQTV 199




70|SequenceR|355|346|VSPVTVHHTP

>sp|SYE_PYRFU|GLUTAMATE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PVTVHH 8
PVTVHH
Sbjct: 324 PVTVHH 329


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PVTVHH 8
PVTVHH
Sbjct: 324 PVTVHH 329


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 PVTVHH 8
PVTVHH
Sbjct: 323 PVTVHH 328


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 PVTVHH 8
PVTVHH
Sbjct: 323 PVTVHH 328


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PVTVHH 8
PVT+HH
Sbjct: 322 PVTIHH 327


>sp|SYY_THESM|TYROSINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VSPVTVHH 8
V P+ VHH
Sbjct: 216 VKPIAVHH 223


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 VSPVTVHHTP 10
V+PVT H P
Sbjct: 400 VTPVTSLHPP 409


>sp|RL3_METVS|LARGE ribosomal subunit protein uL3|Methanococcus vannielii (strain

Query: 2 SPVTVHHTP 10
SPVTV TP
Sbjct: 70 SPVTVLETP 78


>sp|RL3_METVA|LARGE ribosomal subunit protein uL3|Methanococcus vannielii

Query: 2 SPVTVHHTP 10
SPVTV TP
Sbjct: 70 SPVTVLETP 78


>sp|DTDA_METJA|D-AMINOACYL-TRNA deacylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSPVTVHHTP 10
VS VHH+P
Sbjct: 117 VSFEVVHHSP 126


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VSPVTVHH 8
VSPVTV H
Sbjct: 290 VSPVTVDH 297


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VSPVTVHHT 9
VSPV + HT
Sbjct: 232 VSPVYIVHT 240


>sp|RS7_METMP|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 1 VSPVTVHHT 9
V+PV V HT
Sbjct: 27 VAPVLVPHT 35


>sp|RS7_METM5|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 1 VSPVTVHHT 9
V+PV V HT
Sbjct: 27 VAPVLVPHT 35


>sp|RS7_METM7|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 1 VSPVTVHHT 9
V+PV V HT
Sbjct: 27 VAPVLVPHT 35


>sp|RS7_METM6|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 1 VSPVTVHHT 9
V+PV V HT
Sbjct: 27 VTPVLVPHT 35


>sp|RL3_METM5|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain

Query: 2 SPVTVHHTP 10
+PVTV TP
Sbjct: 70 TPVTVLETP 78


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSPVTVHH 8
+ PV VHH
Sbjct: 216 LKPVAVHH 223


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VSPVTVHH 8
+ PV VHH
Sbjct: 216 LKPVAVHH 223


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain

Query: 2 SPVTVHHTP 10
+PVTV TP
Sbjct: 70 TPVTVLETP 78


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 6 VHHTP 10
VHHTP
Sbjct: 166 VHHTP 170


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain

Query: 2 SPVTVHHTP 10
+PVTV TP
Sbjct: 70 TPVTVLETP 78


>sp|RL3_METMP|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain

Query: 2 SPVTVHHTP 10
+PVTV TP
Sbjct: 70 TPVTVLETP 78


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VSPVTVHH 8
+ PV VHH
Sbjct: 216 LKPVAVHH 223


>sp|Y372_PYRAE|UPF0284 protein PAE0372|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SPVTVHHTP 10
SP H+TP
Sbjct: 29 SPELTHYTP 37


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VSPVTVHHT 9
V TVHHT
Sbjct: 61 VKAFTVHHT 69


>sp|Y2274_HALSA|UPF0213 protein VNG_2274C|Halobacterium salinarum (strain ATCC 700922

Query: 2 SPVTVHHT 9
+PVT+ HT
Sbjct: 42 TPVTLRHT 49


>sp|SYY_PYRAR|TYROSINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VSPVTVHH 8
V PV +HH
Sbjct: 217 VKPVALHH 224




71|SequenceR|360|351|HSGESVSPVT

>sp|SYY_THEON|TYROSINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 HSGESVSPV 9
H+GE + PV
Sbjct: 211 HNGEKLKPV 219


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 1 HSGESV 6
HSGESV
Sbjct: 352 HSGESV 357


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HSGESVSPV 9
H+GE + PV
Sbjct: 211 HNGEKLKPV 219


>sp|SYY_PYRAB|TYROSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 HSGESVSPV 9
H+GE + PV
Sbjct: 211 HNGEKLKPV 219


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 HSGESVSPV 9
+SGE V P+
Sbjct: 233 YSGEPVKPI 241


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HSGESVSPV 9
H GE + PV
Sbjct: 211 HEGEKLKPV 219


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HSGESVSP 8
H GE+V P
Sbjct: 158 HRGETVKP 165


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 2 SGESVSPVT 10
SGE + P+T
Sbjct: 10 SGERLEPIT 18




72|SequenceR|365|356|FMSSKHSGES

>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 SKHSGES 10
SKHSGE+
Sbjct: 287 SKHSGEA 293


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 SKHSGES 10
SKHSGE+
Sbjct: 287 SKHSGEA 293


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 MSSKHSGES 10
MSSK+ GES
Sbjct: 212 MSSKYLGES 220


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MSSKHSGES 10
MSSK+ GES
Sbjct: 211 MSSKYLGES 219


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 MSSKHSGES 10
MSSK+ GES
Sbjct: 212 MSSKYLGES 220


>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 3 SSKHSGES 10
+SKH+GE+
Sbjct: 77 ASKHAGET 84


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MSSKHSGES 10
MSSK+ GES
Sbjct: 212 MSSKYLGES 220


>sp|DTDA_HALLT|D-AMINOACYL-TRNA deacylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 SKHSGES 10
S+HSGE+
Sbjct: 95 SRHSGET 101


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FMSSKHSGES 10
F+ KH GE+
Sbjct: 188 FLPDKHLGEN 197


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FMSSKHSGES 10
F+ KH GE+
Sbjct: 188 FLPDKHLGEN 197


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FMSSKHSGES 10
F+ KH GE+
Sbjct: 188 FLPDKHLGEN 197




73|SequenceR|370|361|PEPTVFMSSK

>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 2 EPTVFMSS 9
EPTVF+ S
Sbjct: 819 EPTVFLDS 826


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 1 PEPTVFMSS 9
PEP VF+ +
Sbjct: 208 PEPVVFVDN 216


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 2 EPTVFMSS 9
EPT F+SS
Sbjct: 251 EPTAFLSS 258


>sp|UREG_SULTO|UREASE accessory protein UreG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EPTVFMSSK 10
+PTVF+S K
Sbjct: 177 KPTVFISLK 185


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 1 PEPTVFMSSK 10
PE TVFM+ +
Sbjct: 532 PEDTVFMAGE 541


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PEPTVFMSSK 10
PEP VF+ ++
Sbjct: 176 PEPEVFVENR 185




74|SequenceR|375|366|QQKYIPEPTV

>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 4 YIPEPTV 10
Y+PEPT+
Sbjct: 132 YVPEPTI 138


>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 3 KYIPEPTV 10
+Y+PEPT+
Sbjct: 137 EYLPEPTI 144


>sp|FRHD_METJA|COENZYME F420 hydrogenase subunit delta|Methanocaldococcus jannaschii

Query: 1 QQKYIPEPTV 10
Q KYI EP V
Sbjct: 148 QAKYISEPDV 157


>sp|GATE_CALMQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Caldivirga maquilingensis (strain ATCC

Query: 3 KYIPEP 8
KY+PEP
Sbjct: 451 KYVPEP 456


>sp|RFRNP_METKA|RNA-FREE ribonuclease P|Methanopyrus kandleri (strain AV19 /

Query: 4 YIPEPTV 10
YIP PTV
Sbjct: 52 YIPYPTV 58


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 2 QKYIPEPTV 10
++YIP+ TV
Sbjct: 421 ERYIPQVTV 429


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 QKYIPEP 8
QKYIP P
Sbjct: 199 QKYIPTP 205


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 2 QKYIPEPTV 10
++YIP+ TV
Sbjct: 421 ERYIPQVTV 429


>sp|SECY_HALSA|PROTEIN translocase subunit SecY|Halobacterium salinarum (strain ATCC

Query: 2 QKYIPEPTV 10
++YIP+ TV
Sbjct: 422 ERYIPQVTV 430


>sp|IF2G_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 QKYIPEP 8
+KYIP P
Sbjct: 194 EKYIPSP 200


>sp|KTHY_SULAC|PROBABLE thymidylate kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KYIPEP 8
KY PEP
Sbjct: 112 KYFPEP 117


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KYIPEP 8
+YIPEP
Sbjct: 587 RYIPEP 592


>sp|VORD_PYRHO|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus horikoshii (strain ATCC

Query: 3 KYIPEPTV 10
KY PEP +
Sbjct: 61 KYCPEPAI 68


>sp|VORD_PYRFU|KETOISOVALERATE oxidoreductase subunit VorD|Pyrococcus furiosus (strain ATCC

Query: 3 KYIPEPTV 10
KY PEP +
Sbjct: 61 KYCPEPAI 68


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 4 YIPEPTV 10
Y+PEP +
Sbjct: 273 YLPEPDI 279


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 3 KYIPEPT 9
KY+PE T
Sbjct: 407 KYVPEET 413


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 3 KYIPEPTV 10
+YIP+P +
Sbjct: 260 RYIPDPDI 267


>sp|URED_NATPD|UREASE accessory protein UreD|Natronomonas pharaonis (strain ATCC 35678

Query: 3 KYIPEPTV 10
+Y+P PT+
Sbjct: 130 EYVPGPTI 137


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 4 YIPEPTV 10
YIPEP V
Sbjct: 224 YIPEPPV 230


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 QKYIPEP 8
+KYIP P
Sbjct: 194 EKYIPTP 200


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila (strain

Query: 5 IPEPTV 10
+PEPTV
Sbjct: 202 VPEPTV 207


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 4 YIPEPT 9
+IPEPT
Sbjct: 122 WIPEPT 127




75|SequenceR|380|371|PPKQTQQKYI

>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPKQTQQKYI 10
PP++ QQ+++
Sbjct: 160 PPEKIQQRFV 169


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 2 PKQTQQKY 9
PK QQKY
Sbjct: 160 PKDLQQKY 167


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PKQTQQKYI 10
PK+ +KYI
Sbjct: 85 PKKISEKYI 93


>sp|RNP2_HALMA|RIBONUCLEASE P protein component 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPKQTQQKYI 10
PP+ T+Q+++
Sbjct: 117 PPEFTEQRHV 126


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 1 PPKQTQQKYI 10
PP++ +KY+
Sbjct: 460 PPEKKLEKYV 469




76|SequenceR|385|376|MYTIEPPKQT

>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 YTIEPPK 8
Y IEPP+
Sbjct: 245 YVIEPPE 251


>sp|Y340_METJA|UNCHARACTERIZED protein MJ0340|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YTIEPPKQ 9
Y +EPPK+
Sbjct: 191 YGVEPPKR 198


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 MYTIEPPKQT 10
MY + P KQ+
Sbjct: 295 MYALAPEKQS 304


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 MYTIEPPKQT 10
MY + P KQ+
Sbjct: 294 MYALAPEKQS 303


>sp|GVPO_HALMT|GAS vesicle protein O|Haloferax mediterranei (strain ATCC 33500

Query: 5 EPPKQT 10
EPP+QT
Sbjct: 35 EPPEQT 40


>sp|MVK_THEGJ|MEVALONATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 MYTIEPPKQT 10
MY + P KQ+
Sbjct: 295 MYALAPEKQS 304


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 2 YTIEPPK 8
Y IEPP+
Sbjct: 108 YVIEPPE 114


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 3 TIEPPKQT 10
+I+PPK T
Sbjct: 192 SIDPPKPT 199


>sp|Y010_PYRAB|PROTEIN PYRAB00100|Pyrococcus abyssi (strain GE5 /

Query: 4 IEPPKQT 10
IEPPK T
Sbjct: 30 IEPPKDT 36


>sp|Y010_PYRHO|PROTEIN PH0010|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IEPPKQT 10
IEPPK T
Sbjct: 31 IEPPKDT 37




77|SequenceR|390|381|TPGQSMYTIE

>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPGQSMYTI 9
TPG +++TI
Sbjct: 246 TPGPTVFTI 254


>sp|TRPD_METAC|ANTHRANILATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 TPGQSMYTIE 10
TPGQ TIE
Sbjct: 136 TPGQVRKTIE 145


>sp|HEM1_METHJ|GLUTAMYL-TRNA reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PGQSMYTIE 10
PG +YTI+
Sbjct: 289 PGVCLYTID 297


>sp|PDAD_THEAC|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 1 TPGQSMYTI 9
+PGQ ++T+
Sbjct: 63 SPGQILFTV 71


>sp|PDAD_NITMS|PYRUVOYL-DEPENDENT arginine decarboxylase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PGQSMYTI 9
PGQ ++TI
Sbjct: 64 PGQILFTI 71


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC

Query: 2 PGQSMYTI 9
PG+ MY I
Sbjct: 60 PGEDMYLI 67


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 2 PGQSMYTIE 10
PG+ YT+E
Sbjct: 271 PGRIAYTLE 279


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 TPGQSMYTI 9
TP Q YTI
Sbjct: 151 TPSQKYYTI 159


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 PGQSMYT 8
PGQSM T
Sbjct: 50 PGQSMIT 56


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PGQSMYT 8
PGQSM T
Sbjct: 50 PGQSMIT 56


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PGQSMYT 8
PGQSM T
Sbjct: 50 PGQSMIT 56


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PGQSMYT 8
PGQSM T
Sbjct: 50 PGQSMIT 56


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGQSMYT 8
PGQSM T
Sbjct: 50 PGQSMIT 56


>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 2 PGQSMYTIE 10
PG S+Y ++
Sbjct: 323 PGSSVYVVQ 331




78|SequenceR|395|386|EPYRPTPGQS

>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 3 YRPTPGQ 9
YRPTP Q
Sbjct: 336 YRPTPAQ 342


>sp|SRP54_METKA|SIGNAL recognition particle 54 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 EPYRPTPGQ 9
+PYRP G+
Sbjct: 138 DPYRPAAGE 146


>sp|DGGGP_SACS2|DIGERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EPYRPTP 7
+PYRP P
Sbjct: 69 KPYRPIP 75


>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 EPYRPTP 7
+PYRP P
Sbjct: 68 KPYRPIP 74


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 2 PYRPTPGQ 9
PYRP+PG
Sbjct: 61 PYRPSPGD 68


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 EPYRPTP 7
EP+RP P
Sbjct: 150 EPFRPLP 156


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PYRPTP 7
PYRP+P
Sbjct: 509 PYRPSP 514


>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 1 EPYRPTP 7
EP RP+P
Sbjct: 239 EPLRPSP 245


>sp|DGGGP_METVS|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EPYRPTPGQ 9
+P+RP P +
Sbjct: 70 KPFRPIPSK 78


>sp|Y1583_METJA|PROBABLE S-adenosyl-L-methionine-binding protein MJ1583|Methanocaldococcus

Query: 2 PYRPTP 7
PYRP P
Sbjct: 77 PYRPNP 82


>sp|KMT_SACI5|PROTEIN-LYSINE N-methyltransferase|Saccharolobus islandicus (strain REY15A)

Query: 2 PYRPTP 7
PY PTP
Sbjct: 8 PYVPTP 13


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PYRPTP 7
PYRP P
Sbjct: 603 PYRPLP 608


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PYRPTP 7
PYRP P
Sbjct: 621 PYRPLP 626


>sp|RRP42_SACI4|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.14.25

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RRP42_SACI3|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.27)

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RRP42_SACS2|EXOSOME complex component Rrp42|Saccharolobus solfataricus (strain ATCC

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RRP42_SACI7|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RRP42_SACI6|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RRP42_SACI2|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain L.S.2.15

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RRP42_SACI1|EXOSOME complex component Rrp42|Saccharolobus islandicus (strain

Query: 1 EPYRPTPGQ 9
+PY TP Q
Sbjct: 73 KPYEDTPNQ 81


>sp|RL18_PYRAR|LARGE ribosomal subunit protein uL18|Pyrobaculum arsenaticum (strain DSM

Query: 3 YRPTPG 8
+RPTPG
Sbjct: 108 HRPTPG 113


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EPYRPTPG 8
E Y+PT G
Sbjct: 32 ETYKPTAG 39


>sp|EF1A_CENSY|ELONGATION factor 1-alpha|Cenarchaeum symbiosum (strain A)

Query: 2 PYRPTP 7
P RPTP
Sbjct: 395 PVRPTP 400


>sp|FLAB2_AERPE|PROBABLE flagellin 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 EPYRPTPG 8
EPY +PG
Sbjct: 142 EPYTTSPG 149




79|SequenceR|400|391|PKQSLEPYRP

>sp|Y1292_METPE|UPF0280 protein Mpal_1292|Methanosphaerula palustris (strain ATCC

Query: 2 KQSLEPYRP 10
+ +LEPY P
Sbjct: 48 QMTLEPYTP 56


>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SLEPYRP 10
++EP+RP
Sbjct: 214 TIEPFRP 220


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 1 PKQSLEPYRP 10
PK+ +EP P
Sbjct: 284 PKEIVEPITP 293


>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 4 SLEPYRP 10
SLE YRP
Sbjct: 155 SLETYRP 161


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 3 QSLEPYRP 10
+ EPYRP
Sbjct: 318 KRFEPYRP 325


>sp|Y1519_METMJ|UPF0280 protein Memar_1519|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 SLEPYRP 10
+LEPY P
Sbjct: 50 TLEPYTP 56




80|SequenceR|405|396|EAHISPKQSL

>sp|AROC_THEKO|CHORISMATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EAHISPKQSL 10
EAH+SP++ L
Sbjct: 159 EAHVSPEELL 168


>sp|RL22_METMA|LARGE ribosomal subunit protein uL22|Methanosarcina mazei (strain ATCC

Query: 1 EAHISPKQS 9
E HISPK+S
Sbjct: 22 ELHISPKKS 30


>sp|RL22_METAC|LARGE ribosomal subunit protein uL22|Methanosarcina acetivorans (strain

Query: 1 EAHISPKQS 9
E HISPK+S
Sbjct: 22 ELHISPKKS 30


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 HISPKQSL 10
HI+P Q+L
Sbjct: 683 HITPNQAL 690


>sp|ALAXM_SACS2|ALANYL-TRNA editing protein AlaX-M|Saccharolobus solfataricus (strain ATCC

Query: 2 AHISPKQS 9
HISP+Q+
Sbjct: 122 GHISPEQA 129


>sp|RL22_METBU|LARGE ribosomal subunit protein uL22|Methanococcoides burtonii (strain

Query: 1 EAHISPKQS 9
E HISPK+S
Sbjct: 22 ELHISPKKS 30


>sp|RL22_METBF|LARGE ribosomal subunit protein uL22|Methanosarcina barkeri (strain

Query: 1 EAHISPKQS 9
E HISPK+S
Sbjct: 22 ELHISPKKS 30


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 3 HISPKQS 9
HISPK++
Sbjct: 587 HISPKKN 593




81|SequenceR|410|401|PTLELEAHIS

>sp|DPCKG_STAMF|GTP-DEPENDENT dephospho-CoA kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PTLELEAHI 9
P +LEAHI
Sbjct: 33 PIKDLEAHI 41




82|SequenceR|415|406|PPLPRPTLEL

>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPLPRPTLE 9
PP+PRP+ E
Sbjct: 582 PPVPRPSTE 590


>sp|HCGF_METTW|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 1 PPLPRPTL 8
PP+PR T+
Sbjct: 60 PPMPRATI 67


>sp|COBS_METAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PLPRP 6
PLPRP
Sbjct: 171 PLPRP 175


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 PPLPRPTLE 9
PPLP P E
Sbjct: 48 PPLPDPEKE 56


>sp|BGAL_SACS2|BETA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 PLPRP 6
PLPRP
Sbjct: 91 PLPRP 95


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPLPRPTL 8
PPLP P L
Sbjct: 523 PPLPLPGL 530


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PPLPRPTLEL 10
PP P+P E+
Sbjct: 586 PPEPKPLSEV 595


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPLPRPTLEL 10
PP P TLE+
Sbjct: 258 PPTPIETLEM 267




83|SequenceR|420|411|RPLSRPPLPR

>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RPLSRPP 7
RP+ RPP
Sbjct: 265 RPVLRPP 271


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 1 RPLSRPPLPR 10
RP++RP L R
Sbjct: 361 RPVTRPYLSR 370


>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 RPPLPR 10
RPP+P+
Sbjct: 106 RPPIPK 111


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 2 PLSRPPLPR 10
PLS P+P+
Sbjct: 61 PLSAKPMPK 69


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 RPLSRPPLPR 10
R + PPLPR
Sbjct: 112 RGIQAPPLPR 121


>sp|NCPP_PYRIL|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum islandicum (strain

Query: 1 RPLSRPPLP 9
+P+S PP P
Sbjct: 34 KPVSLPPQP 42




84|SequenceR|425|416|SDPGYRPLSR

>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SDPGYRPLSR 10
SDPGYR +R
Sbjct: 26 SDPGYRAAAR 35


>sp|MTM3_METJA|TYPE II methyltransferase M.MjaIII|Methanocaldococcus jannaschii (strain

Query: 2 DPGYRPLSR 10
DP Y+PL++
Sbjct: 199 DPPYKPLNK 207


>sp|Y792_SULAC|PROTEIN Saci_0792|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SDPGYRPLSR 10
SDP + PLS+
Sbjct: 94 SDPRFPPLSK 103


>sp|Y229_SULTO|PROTEIN STK_02290|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SDPGYRPLSR 10
SDP + PLS+
Sbjct: 98 SDPRFPPLSK 107


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SDPGYRPLSR 10
SDP + PLSR
Sbjct: 101 SDPRFEPLSR 110


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PGYRPL 8
PGY+PL
Sbjct: 535 PGYKPL 540


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DPGYRPLSR 10
+PG++PL R
Sbjct: 147 EPGFKPLFR 155


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 2 DPGYRP 7
DPGY P
Sbjct: 7 DPGYSP 12


>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 SDPGYRPLSR 10
SDP + PL +
Sbjct: 94 SDPRFNPLQK 103


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 SDPGYRPLSR 10
SDP + PL +
Sbjct: 94 SDPRFNPLQK 103


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 SDPGYRPLSR 10
SDP + PL +
Sbjct: 94 SDPRFNPLQK 103


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 SDPGYRPLSR 10
SDP + PL +
Sbjct: 94 SDPRFNPLQK 103


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 1 SDPGYRPLSR 10
SDP + PL +
Sbjct: 94 SDPRFNPLQK 103


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 1 SDPGYRPLSR 10
SDP + PL +
Sbjct: 94 SDPRFNPLQK 103


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DPGYRPL 8
DP +RPL
Sbjct: 159 DPKFRPL 165


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 2 DPGYRP 7
DPGY P
Sbjct: 219 DPGYAP 224


>sp|PSB2_PYRAE|PROTEASOME subunit beta 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DPGYRP 7
D GYRP
Sbjct: 148 DTGYRP 153


>sp|RL5_SULAC|LARGE ribosomal subunit protein uL5|Sulfolobus acidocaldarius (strain

Query: 3 PGYRPLSR 10
PGYR + R
Sbjct: 138 PGYRTMKR 145


>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PGYRPL 8
PGY PL
Sbjct: 188 PGYEPL 193


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DPGYRPL 8
DP +RPL
Sbjct: 159 DPKFRPL 165


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DPGYRPL 8
DP +RPL
Sbjct: 159 DPKFRPL 165


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DPGYRP 7
DPGY P
Sbjct: 189 DPGYIP 194


>sp|RS6E_PYRCJ|SMALL ribosomal subunit protein eS6|Pyrobaculum calidifontis (strain

Query: 3 PGYRPLSR 10
PGYRP R
Sbjct: 86 PGYRPRKR 93


>sp|Y256_SACS2|UPF0215 protein SSO0256|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 4 GYRPLS 9
GYRPLS
Sbjct: 122 GYRPLS 127


>sp|Y960_SACI1|UPF0215 protein YN1551_0960|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|Y1993_SACI2|UPF0215 protein LS215_1993|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|Y1961_SACI3|UPF0215 protein M1627_1961|Saccharolobus islandicus (strain M.16.27)

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|Y1960_SACI7|UPF0215 protein YG5714_1960|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|Y1891_SACI6|UPF0215 protein M164_1891|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|Y1884_SACI4|UPF0215 protein M1425_1884|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DPGYRPLS 9
D GY PLS
Sbjct: 7 DDGYFPLS 14


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DPGYRPL 8
DP +RPL
Sbjct: 159 DPRFRPL 165


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 SDPGYRP 7
+DPG RP
Sbjct: 534 ADPGIRP 540


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPGYRPLSR 10
+ G++P+SR
Sbjct: 148 EEGFKPISR 156


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SDPGYRP 7
+DPG RP
Sbjct: 534 ADPGIRP 540


>sp|LEUC_PICTO|3-ISOPROPYLMALATE dehydratase large subunit|Picrophilus torridus (strain ATCC

Query: 4 GYRPLS 9
GY+PLS
Sbjct: 48 GYKPLS 53


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPGYRPLS 9
+PG++PL+
Sbjct: 142 EPGFQPLA 149


>sp|RS6E_THESM|SMALL ribosomal subunit protein eS6|Thermococcus sibiricus (strain DSM

Query: 3 PGYRPLSR 10
PG+RP R
Sbjct: 92 PGFRPQER 99


>sp|RS6E_PYRAR|SMALL ribosomal subunit protein eS6|Pyrobaculum arsenaticum (strain DSM

Query: 3 PGYRPLSR 10
PGYRP R
Sbjct: 86 PGYRPKKR 93


>sp|PDXT_METMJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanoculleus marisnigri

Query: 2 DPGYRPLS 9
DP RPLS
Sbjct: 94 DPRVRPLS 101


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PGYRPL 8
PGY+P+
Sbjct: 335 PGYKPV 340


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PGYRPL 8
PGY+P+
Sbjct: 335 PGYKPV 340




85|SequenceR|430|421|LPWWSSDPGY

>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 3 WWSSDPGY 10
WW DP Y
Sbjct: 127 WWYDDPKY 134


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WWSSDPGY 10
WW DP Y
Sbjct: 127 WWYDDPKY 134


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 2 PWWSSDPG 9
P+W SD G
Sbjct: 248 PYWKSDEG 255


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 4 WSSDPGY 10
WS DP Y
Sbjct: 193 WSDDPSY 199


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 1 LPWWSSDP 8
+P WS DP
Sbjct: 101 VPTWSQDP 108


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LPWWSSD 7
PWW S+
Sbjct: 259 FPWWVSN 265


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 2 PWWSSDPGY 10
P W DP Y
Sbjct: 348 PAWPDDPAY 356


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 LPWWSSDPGY 10
+ +W +PGY
Sbjct: 407 MEYWIKNPGY 416


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 LPWWSSDPGY 10
+ +W +PGY
Sbjct: 413 MEYWIKNPGY 422


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 LPWWSSDPG 9
+P+W++D G
Sbjct: 451 IPYWTTDTG 459


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PWWSS 6
PWW+S
Sbjct: 198 PWWNS 202


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PWWSS 6
PWW+S
Sbjct: 196 PWWNS 200


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PWWSS 6
PWW+S
Sbjct: 196 PWWNS 200


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PWWSSDP 8
P+W+ DP
Sbjct: 26 PFWTLDP 32


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PWWSSDP 8
P+W+ DP
Sbjct: 26 PFWTLDP 32


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 PWWSSDP 8
P+W+ DP
Sbjct: 26 PFWTLDP 32


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PWWS 5
PWW+
Sbjct: 75 PWWA 78


>sp|DNPH1_METAC|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 LPWWSSDPG 9
L W +DPG
Sbjct: 59 LSWHVADPG 67


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WWSSDPG 9
WW D G
Sbjct: 395 WWRGDKG 401


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PWWSS 6
PWW S
Sbjct: 196 PWWES 200


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PWWSS 6
PWW S
Sbjct: 196 PWWDS 200


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 3 WWSSDP 8
WW DP
Sbjct: 253 WWLEDP 258


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 1 LPWWSSDP 8
LP+W DP
Sbjct: 156 LPYWLHDP 163


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PWWSSDP 8
PW ++DP
Sbjct: 507 PWKTNDP 513


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LPWWSSD 7
+PWW +
Sbjct: 476 VPWWKEE 482


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PWWSSDPGY 10
P+++ DP Y
Sbjct: 86 PYYTLDPSY 94


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 LPWWSSD 7
L WW+ D
Sbjct: 33 LGWWTRD 39


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PWWSSDPGY 10
P+++ DP Y
Sbjct: 149 PYYTLDPSY 157


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PWWSSDPGY 10
P+++ DP Y
Sbjct: 149 PYYTLDPSY 157




86|SequenceR|435|426|VEPNLLPWWS

>sp|TRPF_PYRAB|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 VEPNLLPW 8
VEP+LLP+
Sbjct: 82 VEPSLLPY 89


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VEPNLLPW 8
V NLLPW
Sbjct: 347 VNKNLLPW 354


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 VEPNLLPW 8
V NLLPW
Sbjct: 350 VNRNLLPW 357


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VEPNLLPW 8
V N+LPW
Sbjct: 346 VNKNMLPW 353


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 VEPNLLPW 8
V N+LPW
Sbjct: 343 VNKNMLPW 350


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 NLLPW 8
NLLPW
Sbjct: 343 NLLPW 347


>sp|GLYA_THEAC|SERINE hydroxymethyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 4 NLLPW 8
NLLPW
Sbjct: 343 NLLPW 347


>sp|GLYA_PICTO|SERINE hydroxymethyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 NLLPW 8
NLLPW
Sbjct: 349 NLLPW 353


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 4 NLLPW 8
NLLPW
Sbjct: 343 NLLPW 347


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 4 NLLPW 8
NLLPW
Sbjct: 343 NLLPW 347


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 4 NLLPW 8
NLLPW
Sbjct: 342 NLLPW 346


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 NLLPW 8
NLLPW
Sbjct: 342 NLLPW 346


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 NLLPW 8
NLLPW
Sbjct: 346 NLLPW 350


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 4 NLLPW 8
NLLPW
Sbjct: 346 NLLPW 350


>sp|GLYA_ARCFU|SERINE hydroxymethyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NLLPW 8
NLLPW
Sbjct: 355 NLLPW 359


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 4 NLLPW 8
NLLPW
Sbjct: 117 NLLPW 121


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPNLLP 7
EPN+LP
Sbjct: 290 EPNMLP 295


>sp|PSTB_METKA|PHOSPHATE import ATP-binding protein PstB|Methanopyrus kandleri (strain AV19

Query: 3 PNLLPWWS 10
PN PW S
Sbjct: 95 PNPFPWMS 102


>sp|GFO6_HALMA|D-XYLOSE 1-dehydrogenase [NADP(+)]|Haloarcula marismortui (strain ATCC 43049

Query: 1 VEPNLLPW 8
VEP PW
Sbjct: 282 VEPAFYPW 289


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 3 PNLLPWW 9
PN +P W
Sbjct: 162 PNFVPMW 168


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 NLLPW 8
NLLPW
Sbjct: 350 NLLPW 354


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 4 NLLPW 8
NLLPW
Sbjct: 348 NLLPW 352


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 NLLPW 8
NLLPW
Sbjct: 348 NLLPW 352


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 NLLPW 8
NLLPW
Sbjct: 348 NLLPW 352


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 NLLPW 8
NLLPW
Sbjct: 348 NLLPW 352


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 NLLPW 8
NLLPW
Sbjct: 348 NLLPW 352


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EPNLLP 7
EPN+LP
Sbjct: 290 EPNVLP 295


>sp|PHP_SACS2|ARYLDIALKYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 2 EPNLLPWWS 10
+P L P WS
Sbjct: 271 KPKLAPRWS 279


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 2 EPNLLPW 8
+ N+LPW
Sbjct: 311 DDNMLPW 317


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 VEPNLLP 7
V PNL+P
Sbjct: 51 VRPNLIP 57


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VEPNLL 6
VEPNLL
Sbjct: 273 VEPNLL 278


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PNLLPWWS 10
PN +P WS
Sbjct: 60 PNGIPIWS 67


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VEPNLLPWWS 10
V+P+L+ W++
Sbjct: 563 VKPHLIAWYA 572


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VEPNLLPWWS 10
V+P+L+ W++
Sbjct: 567 VKPHLIAWFA 576


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VEPNLLPW 8
++PN L W
Sbjct: 333 IDPNYLAW 340


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEPNLLPW 8
++PN L W
Sbjct: 333 IDPNYLAW 340


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VEPNLLPW 8
++PN L W
Sbjct: 333 IDPNYLAW 340


>sp|RPO5_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfolobus acidocaldarius (strain

Query: 1 VEPNLLPW 8
++P LPW
Sbjct: 37 IKPEQLPW 44


>sp|RPO5_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo5|Sulfurisphaera tokodaii (strain DSM

Query: 1 VEPNLLPW 8
++P LPW
Sbjct: 37 IKPEQLPW 44


>sp|RPO5_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo5|Staphylothermus marinus (strain ATCC

Query: 1 VEPNLLPWWS 10
++P LPW S
Sbjct: 34 IKPAQLPWIS 43




87|SequenceR|440|431|SQPTEVEPNL

>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QPTEVEP 8
QPTEVEP
Sbjct: 25 QPTEVEP 31


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QPTEVEP 8
Q TEVEP
Sbjct: 25 QATEVEP 31


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 QPTEVEP 8
Q TEVEP
Sbjct: 25 QATEVEP 31


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PTEVEPNL 10
P EV+PN+
Sbjct: 784 PVEVKPNM 791


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PTEVEPNL 10
P EV+PN+
Sbjct: 784 PVEVKPNM 791


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PTEVEPNL 10
P EV+PN+
Sbjct: 784 PVEVKPNM 791


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 2 QPTEVEPNL 10
+P EVEP L
Sbjct: 329 EPQEVEPGL 337


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PTEVEPNL 10
PTE++P L
Sbjct: 85 PTELDPRL 92


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PTEVEPNL 10
PTE+E NL
Sbjct: 91 PTELEVNL 98


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 QPTEVEP 8
+PTE EP
Sbjct: 432 EPTETEP 438




88|SequenceR|445|436|PTTLQSQPTE

>sp|GATA_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanothermobacter thermautotrophicus

Query: 1 PTTLQSQP 8
PTTL S P
Sbjct: 236 PTTLDSSP 243


>sp|GLMM_METS3|PROBABLE phosphoglucosamine mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 TTLQSQP 8
TTL SQP
Sbjct: 197 TTLNSQP 203


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PTTLQSQPT 9
PT L+ +PT
Sbjct: 205 PTELKKEPT 213




89|SequenceR|450|441|KPEFDPTTLQ

>sp|ASPGP_PYRFU|PLANT-TYPE L-asparaginase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PEFDPTT 8
PE+DPTT
Sbjct: 130 PEYDPTT 136


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 2 PEFDPTT 8
PE+DPTT
Sbjct: 130 PEYDPTT 136


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 2 PEFDPTTLQ 10
P FDPT L+
Sbjct: 305 PAFDPTPLE 313


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 2 PEFDPTT 8
PEFDP++
Sbjct: 332 PEFDPSS 338


>sp|GATD_NANEQ|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PEFDPTTLQ 10
P FDP+ L+
Sbjct: 288 PGFDPSILE 296


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 2 PEFDPTTLQ 10
PEF PT ++
Sbjct: 107 PEFGPTEVE 115


>sp|HPRT_ACIB4|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Aciduliprofundum boonei (strain DSM

Query: 2 PEFDPTTLQ 10
PE DP L+
Sbjct: 31 PEIDPAVLK 39


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 1 KPEFDPTTLQ 10
K E DP TL+
Sbjct: 318 KQELDPLTLK 327


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 KPEFDPTTLQ 10
+P+ DP TL+
Sbjct: 201 RPDVDPDTLE 210


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 KPEFDPTTLQ 10
K E DP TL+
Sbjct: 324 KQEIDPLTLK 333


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 KPEFDPTTLQ 10
K E DP TL+
Sbjct: 318 KQEIDPLTLK 327


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KPEFDP 6
KP++DP
Sbjct: 915 KPDYDP 920


>sp|Y511_METAC|UPF0228 protein MA_0511|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PEFDPTT 8
P FDPTT
Sbjct: 198 PPFDPTT 204


>sp|RIBL_METHJ|FAD synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 FDPTTLQ 10
FDP TLQ
Sbjct: 95 FDPETLQ 101


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 1 KPEFDPTTLQ 10
K E DP TL+
Sbjct: 318 KQEIDPLTLK 327


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 PEFDPTTL 9
PEF+ TTL
Sbjct: 25 PEFELTTL 32




90|SequenceR|455|446|LSPSCKPEFD

>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PSCKPEF 9
P C+PEF
Sbjct: 132 PDCRPEF 138


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PSCKPEF 9
P C+PEF
Sbjct: 133 PDCRPEF 139


>sp|AROC_PYRNV|CHORISMATE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LSPSCKPE 8
L+P C+PE
Sbjct: 54 LNPRCEPE 61


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LSPSCKPE 8
L+P C+PE
Sbjct: 54 LNPRCEPE 61


>sp|AROC_PYRCJ|CHORISMATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LSPSCKPE 8
L+P C+PE
Sbjct: 54 LNPRCEPE 61


>sp|AROC_PYRAR|CHORISMATE synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LSPSCKPE 8
L+P C+PE
Sbjct: 54 LNPRCEPE 61


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSPSCKPE 8
L+P C+PE
Sbjct: 54 LNPRCEPE 61


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PSCKPEF 9
P C+PE+
Sbjct: 133 PDCRPEY 139


>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus

Query: 5 CKPEFD 10
C PEFD
Sbjct: 90 CAPEFD 95


>sp|Y692_ARCFU|UNCHARACTERIZED protein AF_0692|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 SCKPE 8
SCKPE
Sbjct: 248 SCKPE 252


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 PSCKPEF 9
P C+PE+
Sbjct: 131 PDCRPEY 137


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 5 CKPEFD 10
CK EFD
Sbjct: 247 CKEEFD 252


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PSCKPEF 9
P C+PE+
Sbjct: 132 PDCRPEY 138


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 5 CKPEFD 10
CK EFD
Sbjct: 247 CKDEFD 252


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 LSPSCKPEFD 10
L+P PEF+
Sbjct: 87 LNPIASPEFE 96


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 CKPEFD 10
C+P+FD
Sbjct: 189 CEPKFD 194


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PSCKPE 8
P C+PE
Sbjct: 199 PECRPE 204


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSPSCKPEFD 10
L+P PEF+
Sbjct: 87 LNPIASPEFE 96


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 5 CKPEFD 10
C+P+FD
Sbjct: 136 CEPKFD 141


>sp|NADA_METBF|QUINOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PSCKPE 8
P C+PE
Sbjct: 198 PECRPE 203


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 CKPEFD 10
C+P+FD
Sbjct: 136 CEPKFD 141


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LSPSCKPE 8
L P C PE
Sbjct: 154 LYPDCSPE 161


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSPSCKPE 8
L P C PE
Sbjct: 152 LYPDCSPE 159


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PSCKPEF 9
P C+P F
Sbjct: 137 PDCRPAF 143


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 CKPEFD 10
C+P+FD
Sbjct: 138 CEPKFD 143




91|SequenceR|460|451|SLLLDLSPSC

>sp|RIFK_SACS2|RIBOFLAVIN kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLLDLSPS 9
LLLD SPS
Sbjct: 98 LLLDSSPS 105




92|SequenceR|465|456|DIKFGSLLLD

>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KFGSLLLD 10
KFG+LLLD
Sbjct: 463 KFGTLLLD 470


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DIKFGSLLL 9
D++FG LLL
Sbjct: 222 DVRFGLLLL 230


>sp|KADA_AERPE|ADENYLATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IKFGSLLLD 10
+ FGS +LD
Sbjct: 39 VNFGSFMLD 47


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 1 DIKFGSLLL 9
DIKFG +L
Sbjct: 360 DIKFGKSIL 368


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 DIKFGSLLLD 10
++KF S L+D
Sbjct: 76 EVKFSSWLID 85


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 DIKFGSLLLD 10
DIK G+ L+D
Sbjct: 278 DIKTGNKLMD 287


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 1 DIKFGSLLLD 10
DIK G+ L+D
Sbjct: 278 DIKTGNKLMD 287


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 DIKFGSLLLD 10
DIK G+ L+D
Sbjct: 278 DIKTGNKLMD 287


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 DIKFGSLLLD 10
DIK G+ L+D
Sbjct: 278 DIKTGNKLMD 287


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 DIKFGSLLLD 10
DIK G+ L+D
Sbjct: 278 DIKTGNKLMD 287


>sp|VHUD_METMP|F420-NON-REDUCING hydrogenase vhu iron-sulfur subunit|Methanococcus maripaludis

Query: 2 IKFGSLLLD 10
+KFG +LD
Sbjct: 83 VKFGKQILD 91




93|SequenceR|470|461|CFPSSDIKFG

>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 CFPSSDIKFG 10
C P++D KFG
Sbjct: 154 CVPATDPKFG 163


>sp|YSO3_ACIAM|UNCHARACTERIZED protein in sor 5'region|Acidianus ambivalens (Desulfurolobus

Query: 2 FPSSDIKF 9
FP+ DI+F
Sbjct: 161 FPAYDIRF 168


>sp|HIS4_SACS2|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Saccharolobus solfataricus

Query: 3 PSSDIKFG 10
PS DI FG
Sbjct: 6 PSIDISFG 13


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PSSDIKFG 10
P SD++FG
Sbjct: 269 PLSDLRFG 276


>sp|PCNA_NITMS|DNA polymerase sliding clamp|Nitrosopumilus maritimus (strain SCM1)

Query: 5 SDIKFG 10
SDIKFG
Sbjct: 65 SDIKFG 70




94|SequenceR|475|466|FKLDECFPSS

>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 2 KLDECFP 8
+LDEC P
Sbjct: 163 RLDECIP 169


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 5 ECFPSS 10
ECFP S
Sbjct: 444 ECFPKS 449


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 KLDECFPSS 10
KLD+ FP++
Sbjct: 186 KLDKTFPTN 194




95|SequenceR|480|471|AKERQFKLDE

>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 2 KERQFKLDE 10
KER KLDE
Sbjct: 515 KERLSKLDE 523


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KERQFKLDE 10
K +FKLDE
Sbjct: 240 KRAKFKLDE 248


>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KERQFKLD 9
KE+ FKLD
Sbjct: 143 KEKDFKLD 150


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KERQFKLDE 10
++ +FKLDE
Sbjct: 241 RQAKFKLDE 249


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 AKERQFKLDE 10
AKE QFK+ E
Sbjct: 652 AKETQFKVAE 661


>sp|Y1463_METJA|UPF0128 protein MJ1463|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KERQFKL 8
KER+FKL
Sbjct: 24 KEREFKL 30




96|SequenceR|485|476|PPSLSAKERQ

>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 PPSLSAKERQ 10
PP+LS E+Q
Sbjct: 141 PPNLSGGEKQ 150


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|Y373_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 PPSLSAKERQ 10
PP+LS E+Q
Sbjct: 141 PPNLSGGEKQ 150


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 PPSLSAKERQ 10
PPSLSA+ +
Sbjct: 142 PPSLSARSEE 151




97|SequenceR|490|481|EKPPSPPSLS

>sp|AGLF_HALVD|UTP--GLUCOSE-1-PHOSPHATE uridylyltransferase AglF|Haloferax volcanii (strain ATCC 29605

Query: 1 EKPPSPPS 8
EKP PPS
Sbjct: 157 EKPEEPPS 164


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKPPSPPSLS 10
EKP PPS +
Sbjct: 71 EKPKLPPSFA 80


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 EKPPSPPS 8
EKP PPS
Sbjct: 146 EKPEIPPS 153


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 4 PSPPSLS 10
P PPSLS
Sbjct: 140 PVPPSLS 146


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 4 PSPPSLS 10
P PPSLS
Sbjct: 140 PVPPSLS 146


>sp|Y3409_METJA|UNCHARACTERIZED protein MJECS09|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPPSPPSL 9
KPPS P L
Sbjct: 28 KPPSFPKL 35


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 4 PSPPSLS 10
P PPSLS
Sbjct: 140 PVPPSLS 146


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 PPSPPSL 9
PP PPSL
Sbjct: 378 PPRPPSL 384


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 3 PPSPPSL 9
PP PPSL
Sbjct: 378 PPRPPSL 384


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 PPSPPSL 9
PPSPP +
Sbjct: 724 PPSPPKI 730


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 3 PPSPPSL 9
PP PPSL
Sbjct: 378 PPRPPSL 384


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 EKPPSPPS 8
+KPP P S
Sbjct: 53 DKPPGPTS 60


>sp|AGL11_HALVD|LOW-SALT glycan biosynthesis nucleotidyltransferase Agl11|Haloferax volcanii

Query: 1 EKPPSPPS 8
EKP PP+
Sbjct: 158 EKPDEPPT 165


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKPPSP 6
+KPPSP
Sbjct: 189 KKPPSP 194


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PPSPP 7
PPSPP
Sbjct: 237 PPSPP 241


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KPPSPPSL 9
+PP PP++
Sbjct: 474 RPPFPPNM 481


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EKPPSP 6
EKPP P
Sbjct: 245 EKPPGP 250


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 1 EKPPSPPS 8
+KPP P S
Sbjct: 62 DKPPGPTS 69


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPSPP 7
PPSPP
Sbjct: 94 PPSPP 98




98|SequenceR|495|486|AWSPFEKPPS

>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WSPFEKP 8
W+P+ KP
Sbjct: 222 WAPYRKP 228


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WSPFEKPPS 10
WSP++ P S
Sbjct: 31 WSPYDPPNS 39


>sp|ADEC_METJA|ADENINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AWSPFEKP 8
WS FE P
Sbjct: 516 GWSSFENP 523


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 AWSPFEKPP 9
W P EK P
Sbjct: 759 GWKPLEKYP 767


>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 2 WSPFEK 7
W PFEK
Sbjct: 114 WLPFEK 119


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 AWSPFE 6
W+PFE
Sbjct: 366 GWTPFE 371


>sp|GGGPS_NITMS|GERANYLGERANYLGLYCERYL phosphate synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 PFEKP 8
PFEKP
Sbjct: 151 PFEKP 155


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AWSPFEKPP 9
W+P E PP
Sbjct: 245 GWAPRELPP 253


>sp|ACDD_METKA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanopyrus kandleri

Query: 1 AWSPFEKP 8
A+ PFE+P
Sbjct: 111 AYFPFEEP 118


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 AWSPFE 6
W+PFE
Sbjct: 408 GWTPFE 413


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 AWSPFE 6
W+PFE
Sbjct: 408 GWTPFE 413


>sp|PYRC_HALSA|DIHYDROOROTASE salinarum (strain ATCC 700922

Query: 2 WSPFE 6
W+PFE
Sbjct: 385 WTPFE 389


>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AWSPFEKPP 9
AW P E P
Sbjct: 43 AWKPVENYP 51




99|SequenceR|500|491|VESLPAWSPF

>sp|RS13_ARCFU|SMALL ribosomal subunit protein uS13|Archaeoglobus fulgidus (strain

Query: 1 VESLPAW 7
+ESLP+W
Sbjct: 69 IESLPSW 75


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VESLPAWSPF 10
+ LP WSP
Sbjct: 264 ITELPQWSPL 273


>sp|Y1446_ARCFU|UNCHARACTERIZED protein AF_1446|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESLPAWSP 9
E LP W P
Sbjct: 78 EKLPPWPP 85


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 1 VESLPAWSP 9
+ P WSP
Sbjct: 262 IREFPEWSP 270


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VESLPAWS 8
VE LP W+
Sbjct: 146 VEGLPKWA 153


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LPAWSPF 10
+P WSP
Sbjct: 267 IPEWSPL 273


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 1 VESLPAWS 8
++ LP WS
Sbjct: 132 IDRLPGWS 139


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ESLPAW 7
ESLP W
Sbjct: 1096 ESLPLW 1101


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 VESLPAWSP 9
+++LP W P
Sbjct: 216 LDTLPDWDP 224


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 308 VMSVPAHAPF 317


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 VESLPAWSP 9
+++LP W P
Sbjct: 216 LDTLPDWDP 224


>sp|RS19E_PYRHO|SMALL ribosomal subunit protein eS19|Pyrococcus horikoshii (strain ATCC

Query: 5 PAWSPF 10
P W+PF
Sbjct: 29 PEWAPF 34


>sp|RS19E_PYRAB|SMALL ribosomal subunit protein eS19|Pyrococcus abyssi (strain GE5 /

Query: 5 PAWSPF 10
P W+PF
Sbjct: 29 PEWAPF 34


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VESLPAWSPF 10
V+ LPA PF
Sbjct: 27 VDGLPAGLPF 36


>sp|RS19E_PYRFU|SMALL ribosomal subunit protein eS19|Pyrococcus furiosus (strain ATCC

Query: 5 PAWSPF 10
P W+PF
Sbjct: 29 PEWAPF 34


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VESLPAWSPF 10
V+ LPA PF
Sbjct: 27 VDGLPAGLPF 36


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 305 VMSVPAHAPF 314


>sp|AROC_METMA|CHORISMATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VESLPAWSPF 10
V+ LPA PF
Sbjct: 27 VDGLPAGLPF 36


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 305 VMSVPAHAPF 314


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 304 VMSVPAHAPF 313


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 314 VMSVPAHAPF 323


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 315 VMSVPAHAPF 324


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 4 LPAWSPF 10
LPA+SP+
Sbjct: 133 LPAYSPY 139


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 314 VMSVPAHAPF 323


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VESLPAWSPF 10
V S+PA +PF
Sbjct: 314 VMSVPAHAPF 323


>sp|RS19E_THEKO|SMALL ribosomal subunit protein eS19|Thermococcus kodakarensis (strain

Query: 5 PAWSPF 10
P W+PF
Sbjct: 29 PEWAPF 34




100|SequenceR|505|496|KPTQPVESLP

>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 KPTQPVESLP 10
KP PV LP
Sbjct: 161 KPIHPVAGLP 170


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 PTQPVESL 9
P QPVES
Sbjct: 118 PPQPVESF 125


>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 PTQPVESLP 10
PT+ VE+LP
Sbjct: 15 PTKVVENLP 23


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 243 PTSPIDYIP 251


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 PTQPVESLP 10
PT PV+ +P
Sbjct: 216 PTSPVDYVP 224


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PTQPVESLP 10
PT PV+ +P
Sbjct: 216 PTSPVDYVP 224


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 579 PTNPIDYVP 587


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPTQPVESLP 10
K +P+ES+P
Sbjct: 42 KEKKPIESMP 51


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 240 PTSPIDYVP 248


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 2 PTQPVESLP 10
PT PV+ +P
Sbjct: 245 PTNPVDYVP 253


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 240 PTSPIDYVP 248


>sp|Y2307_ARCFU|UNCHARACTERIZED protein AF_2307|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KPTQPVESL 9
KP +P ESL
Sbjct: 55 KPARPFESL 63


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 217 PTSPIDYVP 225


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 240 PTSPIDYVP 248


>sp|TF2B_METAC|TRANSCRIPTION initiation factor IIB|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 243 PTSPIDYVP 251


>sp|TF2B_METMZ|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (Methanosarcina frisia)

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 243 PTSPIDYVP 251


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 243 PTSPIDYVP 251


>sp|TF2B_METMA|TRANSCRIPTION initiation factor IIB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 243 PTSPIDYVP 251


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 2 PTQPVESLP 10
PT PV+ +P
Sbjct: 245 PTNPVDYVP 253


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 2 PTQPVESLP 10
PT PV+ +P
Sbjct: 245 PTNPVDYVP 253


>sp|MOBA_THEGJ|PROBABLE molybdenum cofactor guanylyltransferase|Thermococcus gammatolerans

Query: 5 PVESLP 10
P+ESLP
Sbjct: 164 PIESLP 169


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 2 PTQPVESLP 10
PT PV+ +P
Sbjct: 245 PTNPVDYVP 253


>sp|RF1_HALSA|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 2 PTQPVESL 9
P QP+ES
Sbjct: 118 PPQPIESF 125


>sp|RF1_HALS3|PEPTIDE chain release factor subunit|Halobacterium salinarum (strain ATCC

Query: 2 PTQPVESL 9
P QP+ES
Sbjct: 118 PPQPIESF 125


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 2 PTQPVESLP 10
PT P++ +P
Sbjct: 245 PTNPIDYVP 253


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 5 PVESLP 10
PVESLP
Sbjct: 165 PVESLP 170


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KPTQPVESLP 10
KP P+ES P
Sbjct: 197 KPGTPMESFP 206


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PTQPVESLP 10
PTQP LP
Sbjct: 400 PTQPDRDLP 408


>sp|NDK_METAR|NUCLEOSIDE diphosphate kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 TQPVESLP 10
T+P+ES P
Sbjct: 94 TKPIESAP 101


>sp|RS19_CENSY|SMALL ribosomal subunit protein uS19|Cenarchaeum symbiosum (strain A)

Query: 1 KPTQPVESLP 10
KP + +ES+P
Sbjct: 10 KPAEELESMP 19


>sp|NDK_METBU|NUCLEOSIDE diphosphate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 TQPVESLP 10
T PV++LP
Sbjct: 91 TNPVDALP 98




101|SequenceR|510|501|QKCTHKPTQP

>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 2 KCTHKPT 8
K THKPT
Sbjct: 402 KITHKPT 408


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QKCTHKPTQP 10
Q C H+ T P
Sbjct: 215 QSCPHRDTSP 224


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QKCTHKPTQP 10
Q C H+ T P
Sbjct: 215 QACPHRDTSP 224


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 KCTHKPTQP 10
KC HKPT P
Sbjct: 680 KC-HKPTTP 687


>sp|RL5_THEVO|LARGE ribosomal subunit protein uL5|Thermoplasma volcanium (strain ATCC

Query: 5 HKPTQ 9
HKPTQ
Sbjct: 38 HKPTQ 42


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 CTHKPTQP 10
CT KP P
Sbjct: 936 CTAKPCHP 943


>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QKCTHKPTQP 10
+ C H+ T P
Sbjct: 211 EACPHRETSP 220




102|SequenceR|515|506|FRQIPQKCTH

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 IPQKCTH 10
IP+KC H
Sbjct: 664 IPEKCPH 670


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 3 QIPQKCTH 10
+IP KC+H
Sbjct: 58 RIPGKCSH 65


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain ATCC

Query: 2 RQIPQKCT 9
+ +P KCT
Sbjct: 205 KNVPMKCT 212


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii

Query: 5 PQKCTH 10
P+KC H
Sbjct: 93 PEKCPH 98




103|SequenceR|520|511|LFFATFRQIP

>sp|SAMP3_HALVD|SMALL archaeal modifier protein 3|Haloferax volcanii (strain ATCC 29605

Query: 2 FFATFRQI 9
FFATFR++
Sbjct: 7 FFATFREV 14


>sp|AATC_THEVO|A-TYPE ATP synthase subunit C|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LFFATFRQIP 10
+F +FR IP
Sbjct: 120 MFIVSFRDIP 129


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 LFFATFRQI 9
LF+AT+R +
Sbjct: 116 LFYATYRPV 124


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FATFRQIP 10
F TFR++P
Sbjct: 331 FGTFREVP 338




104|SequenceR|525|516|EESVDLFFAT

>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 2 ESVDLFF 8
E VDLFF
Sbjct: 182 EKVDLFF 188


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 EESVDLFF 8
EE VD+FF
Sbjct: 77 EELVDVFF 84


>sp|HIS2_METB6|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanoregula boonei (strain DSM 21154

Query: 1 EESVDLFF 8
EE+ DLFF
Sbjct: 72 EEAADLFF 79




105|SequenceR|530|521|VRNYMEESVD

>sp|Y392_METJA|ZINC metalloprotease MJ0392|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VRNYMEESV 9
VR+YME+ V
Sbjct: 278 VRDYMEKPV 286


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRNYME 6
+RNYME
Sbjct: 143 IRNYME 148


>sp|PSA1_HALMA|PROTEASOME subunit alpha 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VRNYMEESVD 10
+R+Y+EE D
Sbjct: 174 IRDYLEEHYD 183


>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 3 NYMEESVD 10
NYM S+D
Sbjct: 43 NYMHTSID 50


>sp|Y579_METJA|UNCHARACTERIZED protein MJ0579|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VRNYMEE 7
+RNY+EE
Sbjct: 255 LRNYIEE 261


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VRNYMEE 7
VR YMEE
Sbjct: 313 VREYMEE 319


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii (strain

Query: 1 VRNYMEESVD 10
+R+Y +E+VD
Sbjct: 159 LRDYQKEAVD 168


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 VRNYMEESV 9
VR Y+EE V
Sbjct: 221 VRKYVEEGV 229




106|SequenceR|535|526|KLWWIVRNYM

>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 KLWWIVRNY 9
KLW +++NY
Sbjct: 550 KLWRLLKNY 558


>sp|Y1092_METJA|PUTATIVE nickel/cobalt efflux system MJ1092|Methanocaldococcus jannaschii

Query: 4 WIVRNYM 10
WI+R+Y+
Sbjct: 97 WIIRSYL 103


>sp|COFD_METB6|2-PHOSPHO-L-LACTATE transferase|Methanoregula boonei (strain DSM 21154

Query: 3 WWIVRN 8
WW +RN
Sbjct: 64 WWGIRN 69


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 4 WIVRNYM 10
WI R YM
Sbjct: 238 WIFREYM 244


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WWIVRNY 9
WW V NY
Sbjct: 423 WWKVYNY 429


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLWWIVRNY 9
K +W+V NY
Sbjct: 312 KYYWLVINY 320


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WIVRNY 9
WIVR Y
Sbjct: 449 WIVRQY 454


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KLWWIVRNY 9
++WWI+ Y
Sbjct: 556 EIWWIIDAY 564


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 KLWWIVRNY 9
K WW V N+
Sbjct: 191 KRWWRVYNH 199


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 WIVRNYM 10
WI R YM
Sbjct: 80 WIKRTYM 86


>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLWWIVR 7
+LWW VR
Sbjct: 71 RLWWRVR 77


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KLWWIVRNY 9
KLW + NY
Sbjct: 842 KLWEVFENY 850


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 1 KLWWIVRNY 9
KL W++ NY
Sbjct: 387 KLMWLLGNY 395


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 WIVRNY 9
W+ RNY
Sbjct: 193 WLARNY 198


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 2 LWWIVRN 8
+WW +++
Sbjct: 149 IWWFIKD 155


>sp|RS13_PYRCJ|SMALL ribosomal subunit protein uS13|Pyrobaculum calidifontis (strain

Query: 1 KLWWIVRN 8
KL W VRN
Sbjct: 62 KLDWAVRN 69


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LWWIVRNYM 10
+WW++ Y+
Sbjct: 17 IWWLLFFYL 25


>sp|RS13_PYRIL|SMALL ribosomal subunit protein uS13|Pyrobaculum islandicum (strain DSM

Query: 1 KLWWIVRN 8
KL W VRN
Sbjct: 62 KLDWAVRN 69




107|SequenceR|540|531|KIEEDKLWWI

>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 1 KIEEDKLWW 9
++EE ++WW
Sbjct: 193 EVEEVEIWW 201


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 3 EEDKLWWI 10
EED L+W+
Sbjct: 175 EEDYLFWL 182


>sp|GATD_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Pyrobaculum aerophilum (strain ATCC

Query: 1 KIEEDKLW 8
KIE +K+W
Sbjct: 69 KIEGEKVW 76


>sp|Y150_METJA|UNCHARACTERIZED protein MJ0150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EDKLWW 9
EDKL+W
Sbjct: 168 EDKLYW 173


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KIEEDKLWW 9
KIEEDK+ +
Sbjct: 476 KIEEDKVIY 484


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 EEDKLWW 9
EE++LW+
Sbjct: 671 EEERLWY 677


>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IEEDKLW 8
I ED+LW
Sbjct: 251 ITEDELW 257


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 EEDKLWWI 10
EEDK+ WI
Sbjct: 117 EEDKVEWI 124


>sp|IDH_HALVD|ISOCITRATE dehydrogenase [NADP]|Haloferax volcanii (strain ATCC 29605

Query: 2 IEEDKLW 8
I ED+LW
Sbjct: 256 ITEDELW 262


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 2 IEEDKLW 8
IE+D++W
Sbjct: 381 IEKDRMW 387




108|SequenceR|545|536|DELFRKIEED

>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DELFRKIEED 10
D++ RKIEED
Sbjct: 256 DDILRKIEED 265


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 ELFRKIEED 10
ELF K+EED
Sbjct: 28 ELFAKVEED 36


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DELFRKIEE 9
DEL R++EE
Sbjct: 260 DELIRRVEE 268


>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 1 DELFRKIEED 10
+ELFR I+ED
Sbjct: 193 EELFRGIDED 202


>sp|PFDA2_THEKO|PREFOLDIN subunit alpha 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LFRKIEED 10
L RKIEED
Sbjct: 115 LLRKIEED 122


>sp|RS6E_METB6|SMALL ribosomal subunit protein eS6|Methanoregula boonei (strain DSM

Query: 1 DELFRKIE 8
DELF K+E
Sbjct: 121 DELFPKVE 128


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DELFRKIEED 10
DELF K+E+D
Sbjct: 544 DELFEKLEDD 553


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 1 DELFRKIE 8
D L+RKIE
Sbjct: 355 DTLYRKIE 362


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DELFRKIEED 10
DE+ R+I+ED
Sbjct: 611 DEILRQIDED 620


>sp|MSRA_METM5|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 DELFRKIE 8
+ELFRKI+
Sbjct: 18 EELFRKIK 25


>sp|CAS6B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Saccharolobus solfataricus (strain ATCC

Query: 4 FRKIEE 9
FRKIEE
Sbjct: 281 FRKIEE 286


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELFRKIEED 10
EL+RKI+E+
Sbjct: 269 ELYRKIDEN 277


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DELFRKIEED 10
D+ RKIEED
Sbjct: 316 DQRIRKIEED 325


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 DELFRKIEED 10
+EL RK++ED
Sbjct: 747 EELVRKVDED 756


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 1 DELFRKIEED 10
DEL RKI+E+
Sbjct: 445 DELKRKIKEN 454


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 1 DELFRKIE 8
D L+RK+E
Sbjct: 355 DTLYRKVE 362


>sp|CMR7A_SACS2|CRISPR system CMR subunit Cmr7|Saccharolobus solfataricus (strain ATCC

Query: 1 DELFRKIEE 9
D+L+R +EE
Sbjct: 175 DKLYRDVEE 183


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ELFRKIEE 9
E++RKIEE
Sbjct: 53 EIWRKIEE 60


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ELFRKIEED 10
ELF KIE+D
Sbjct: 534 ELFEKIEDD 542


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DELFRKIEED 10
DEL R IE D
Sbjct: 116 DELERLIESD 125


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 1 DELFRKIE 8
D L+RK+E
Sbjct: 355 DTLYRKVE 362


>sp|MSRA_METM6|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 1 DELFRKI 7
+ELFRKI
Sbjct: 18 EELFRKI 24


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DELFRKIEE 9
DEL R+I E
Sbjct: 619 DELLRRIRE 627


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DELFRKIEE 9
+ELFRK+ E
Sbjct: 226 EELFRKVVE 234


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 1 DELFRKIEED 10
+ +FR+I+ED
Sbjct: 115 EAVFRRIKED 124


>sp|RL11_PYRHO|LARGE ribosomal subunit protein uL11|Pyrococcus horikoshii (strain ATCC

Query: 1 DELFRKIEED 10
DELF K E++
Sbjct: 155 DELFEKAEKE 164


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ELFRKIEE 9
E++RK+EE
Sbjct: 52 EIWRKVEE 59


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELFRKIEED 10
ELF+KI E+
Sbjct: 176 ELFKKITEN 184


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 2 ELFRKIEE 9
E+FRKI E
Sbjct: 110 EIFRKIPE 117


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DELFRKIEED 10
+EL +KI+ED
Sbjct: 522 EELIKKIDED 531




109|SequenceR|550|541|GDDTTDELFR

>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 GDDTTDE 7
GDD TDE
Sbjct: 683 GDDETDE 689


>sp|ACDE2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 1 GDDTTDELF 9
G D TDE+F
Sbjct: 44 GPDMTDEMF 52


>sp|OTSBH_THEAC|TREHALOSE-6-PHOSPHATE phosphatase-related protein|Thermoplasma acidophilum (strain ATCC

Query: 1 GDDTTDE 7
GDD TDE
Sbjct: 176 GDDATDE 182


>sp|PCNA_HALMA|DNA polymerase sliding clamp|Haloarcula marismortui (strain ATCC 43049

Query: 1 GDDTTDELF 9
G D TDELF
Sbjct: 155 GVDATDELF 163


>sp|HIS2_NATPD|PHOSPHORIBOSYL-ATP pyrophosphatase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GDDTTDELF 9
GD+ DELF
Sbjct: 8 GDEVLDELF 16


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 2 DDTTDELF 9
DD DELF
Sbjct: 482 DDERDELF 489


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 DDTTDELF 9
DD DELF
Sbjct: 479 DDERDELF 486


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 2 DDTTDELF 9
DD DELF
Sbjct: 482 DDERDELF 489


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DDTTDELF 9
DD DELF
Sbjct: 478 DDERDELF 485


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DDTTDELFR 10
DD D+L+R
Sbjct: 366 DDIIDDLYR 374


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GDDTTDELF 9
G D DELF
Sbjct: 90 GGDGADELF 98


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 DTTDELF 9
DT+D+LF
Sbjct: 587 DTSDQLF 593


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 GDDTTDELF 9
G+D TDE+
Sbjct: 292 GNDVTDEIL 300


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 GDDTTDELF 9
G+D TDE+
Sbjct: 292 GNDVTDEIL 300




110|SequenceR|555|546|FKSLEGDDTT

>sp|RIBL_KORCO|FAD synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 KSLEGDD 8
KSL GDD
Sbjct: 29 KSLAGDD 35


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KSLEGDDTT 10
+S+EGDD +
Sbjct: 179 RSIEGDDIS 187


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus

Query: 1 FKSLEGD 7
FK +EGD
Sbjct: 5 FKKIEGD 11


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 2 KSLEGDDTT 10
+ +EGD+TT
Sbjct: 99 RDIEGDETT 107


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 FKSLEGDDTT 10
K LEG+D T
Sbjct: 18 LKFLEGNDNT 27


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FKSLEGDDT 9
FK+L GD+
Sbjct: 30 FKNLRGDEV 38




111|SequenceR|560|551|SFDKVFKSLE

>sp|GLYA_PYRAR|SERINE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DKVFKSL 9
DKVFKSL
Sbjct: 419 DKVFKSL 425


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FDKVFKSL 9
FD VFKS+
Sbjct: 79 FDNVFKSM 86


>sp|GSA1_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 1|Cenarchaeum symbiosum (strain A)

Query: 2 FDKVFKSL 9
FDK+F++L
Sbjct: 373 FDKMFRAL 380


>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SFDKVFKSLE 10
+F KVF S+E
Sbjct: 309 AFKKVFGSIE 318


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 3 DKVFKSLE 10
DK+ KSLE
Sbjct: 128 DKMLKSLE 135


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FDKVFKSLE 10
FD V+ SLE
Sbjct: 354 FDDVYPSLE 362


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SFDKVFKSLE 10
SFD +F+ LE
Sbjct: 343 SFDLIFRWLE 352


>sp|KTHY_STAMF|PROBABLE thymidylate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 2 FDKVFKSLE 10
FDKV++ +E
Sbjct: 182 FDKVYRDVE 190


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 2 FDKVFKSLE 10
FD+ +KSL+
Sbjct: 217 FDRYYKSLD 225




112|SequenceR|565|556|CSANGSFDKV

>sp|Y1989_PYRHO|UPF0104 membrane protein PH1989|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SANGSFDKV 10
S+NGS+ KV
Sbjct: 105 SSNGSYSKV 113


>sp|Y263_METJA|TPR repeat-containing protein MJ0263|Methanocaldococcus jannaschii

Query: 1 CSANGSFDK 9
C+ G+FDK
Sbjct: 22 CADKGNFDK 30


>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 5 GSFDKV 10
GSFDKV
Sbjct: 392 GSFDKV 397


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 2 SANGSFD 8
S NGSFD
Sbjct: 147 SINGSFD 153




113|SequenceR|570|561|AEPPHCSANG

>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEPPHCSANG 10
AE HC+ NG
Sbjct: 233 AEQVHCTING 242


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PHCSANG 10
PHC A G
Sbjct: 200 PHCGAEG 206


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPHC 6
PPHC
Sbjct: 360 PPHC 363


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPHCSAN 9
PP CS N
Sbjct: 145 PPACSPN 151


>sp|AATF_THEVO|A-TYPE ATP synthase subunit F|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EPPHCS 7
E PHCS
Sbjct: 42 ENPHCS 47


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PPHCSAN 9
PP+CS +
Sbjct: 46 PPYCSGS 52


>sp|MCH_METLZ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PHCSANG 10
P CS+NG
Sbjct: 251 PSCSSNG 257


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PHCSAN 9
PHCS N
Sbjct: 187 PHCSDN 192


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PPHCSANG 10
PPHC G
Sbjct: 321 PPHCPQPG 328


>sp|CAS5_HALVD|CRISPR-ASSOCIATED protein Cas5|Haloferax volcanii (strain ATCC 29605

Query: 4 PHCSANG 10
PH ANG
Sbjct: 3 PHIDANG 9


>sp|RS21_SACS2|SMALL ribosomal subunit protein aS21|Saccharolobus solfataricus (strain

Query: 1 AEPPHCSANG 10
EPP CS+ G
Sbjct: 11 VEPPICSSCG 20


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PHCSA 8
PHCSA
Sbjct: 288 PHCSA 292




114|SequenceR|575|566|SAWTKAEPPH

>sp|AROE_METMA|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WTKAEPP 9
WT EPP
Sbjct: 260 WTGVEPP 266


>sp|AROE_METBU|SHIKIMATE dehydrogenase (NADP(+))|Methanococcoides burtonii (strain DSM 6242

Query: 3 WTKAEPP 9
WT EPP
Sbjct: 249 WTGKEPP 255


>sp|AROE_METBF|SHIKIMATE dehydrogenase (NADP(+))|Methanosarcina barkeri (strain Fusaro /

Query: 3 WTKAEPP 9
WT EPP
Sbjct: 260 WTGIEPP 266


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 AWTKAEP 8
AW KA+P
Sbjct: 881 AWAKADP 887


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 AWTKAEPPH 10
+WT+A PH
Sbjct: 105 SWTEARVPH 113


>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 SAWTKAEPPH 10
S W EPP
Sbjct: 224 SDWEPGEPPQ 233


>sp|RFRNP_AERPE|RNA-FREE ribonuclease P|Aeropyrum pernix (strain ATCC 700893

Query: 2 AWTKAEPP 9
AW + +PP
Sbjct: 84 AWVRVKPP 91


>sp|PROF3_LOKSG|LOKI profilin-3|Lokiarchaeum sp. (strain GC14_75)

Query: 1 SAWTKAEP 8
SAW + EP
Sbjct: 50 SAWKEKEP 57


>sp|KCY_METVS|CYTIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SAWTKAEP 8
S W KA+P
Sbjct: 97 SIWLKADP 104


>sp|KCY_METMP|CYTIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SAWTKAEP 8
S W KA+P
Sbjct: 97 SIWLKADP 104


>sp|KCY_METM7|CYTIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 SAWTKAEP 8
S W KA+P
Sbjct: 97 SIWLKADP 104


>sp|KCY_METM6|CYTIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 SAWTKAEP 8
S W KA+P
Sbjct: 97 SIWLKADP 104


>sp|KCY_METM5|CYTIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 SAWTKAEP 8
S W KA+P
Sbjct: 97 SIWLKADP 104


>sp|PDAD1_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SAWTKAEP 8
S WTK EP
Sbjct: 129 STWTKEEP 136


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 AWTKAEPP 9
AW EPP
Sbjct: 363 AWKLVEPP 370


>sp|CDC6_METST|ORC1-TYPE DNA replication protein|Methanosphaera stadtmanae (strain ATCC

Query: 2 AWTKAE 7
WTKAE
Sbjct: 120 GWTKAE 125


>sp|CDC61_METTH|ORC1-TYPE DNA replication protein 1|Methanothermobacter thermautotrophicus

Query: 2 AWTKAE 7
WTKAE
Sbjct: 119 GWTKAE 124


>sp|ILVC_METMA|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina mazei (strain ATCC

Query: 1 SAWTKAE 7
S+W KAE
Sbjct: 52 SSWAKAE 58


>sp|ILVC_METBF|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina barkeri (strain Fusaro

Query: 1 SAWTKAE 7
S+W KAE
Sbjct: 52 SSWAKAE 58


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 WTKAEPP 9
W K+ PP
Sbjct: 10 WLKSRPP 16


>sp|ILVC_METAC|KETOL-ACID reductoisomerase (NADP(+))|Methanosarcina acetivorans (strain

Query: 1 SAWTKAE 7
S+W KAE
Sbjct: 52 SSWAKAE 58




115|SequenceR|580|571|PVQPRSAWTK

>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 1 PVQPRSAW 8
P PRS+W
Sbjct: 397 PAAPRSSW 404


>sp|SECY_HALVD|PROTEIN translocase subunit SecY|Haloferax volcanii (strain ATCC 29605

Query: 1 PVQPRSAW 8
P+Q RS W
Sbjct: 341 PIQSRSDW 348


>sp|ARAT1_THELN|AROMATIC-AMINO-ACID aminotransferase 1|Thermococcus litoralis (strain ATCC 51850

Query: 1 PVQPRSAW 8
PV+P AW
Sbjct: 237 PVKPIKAW 244




116|SequenceR|585|576|QPRPEPVQPR

>sp|GGGPS_SULTO|GERANYLGERANYLGLYCERYL phosphate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PEPVQP 9
PEP++P
Sbjct: 176 PEPIRP 181


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PEPVQP 9
PEP++P
Sbjct: 190 PEPIRP 195


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 4 PEPVQPR 10
P+PV PR
Sbjct: 214 PDPVDPR 220


>sp|HIS8_META3|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PEPVQP 9
PEPV P
Sbjct: 68 PEPVNP 73


>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 3 RPEPVQPR 10
RP+PV P+
Sbjct: 204 RPKPVLPQ 211


>sp|HIS8_METJA|HISTIDINOL-PHOSPHATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PEPVQP 9
PEPV P
Sbjct: 71 PEPVNP 76


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QPRPEPVQP 9
+ RPEP++P
Sbjct: 1009 KKRPEPLRP 1017


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QPRPEPVQP 9
QP+PE QP
Sbjct: 307 QPQPESTQP 315


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PRPEPVQ 8
P PEP++
Sbjct: 157 PSPEPIE 163


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 1 QPRPEP 6
+PRPEP
Sbjct: 18 KPRPEP 23


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 QPRPEPVQ 8
+PRPE V+
Sbjct: 176 KPRPEEVE 183




117|SequenceR|590|581|YLDPAQPRPE

>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DPAQPRPE 10
DP PRP+
Sbjct: 263 DPGAPRPK 270


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 1 YLDPAQPR 8
YLDPA+ R
Sbjct: 338 YLDPAEMR 345


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YLDPAQP 7
Y+DPA+P
Sbjct: 200 YIDPARP 206


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 1 YLDPAQPR 8
YLDPA R
Sbjct: 338 YLDPADMR 345


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YLDPAQPRP 9
YL+P P P
Sbjct: 378 YLEPGVPEP 386


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 1 YLDPAQ 6
YLDPA+
Sbjct: 338 YLDPAE 343


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YLDPAQPRPE 10
Y+ QPRPE
Sbjct: 589 YVKRMQPRPE 598


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 2 LDPAQPR 8
LDPA PR
Sbjct: 395 LDPAAPR 401


>sp|PYRE_HYPBU|OROTATE phosphoribosyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 YLDPAQ 6
YLDPA+
Sbjct: 183 YLDPAE 188


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YLDPAQPRPE 10
Y D A+ RPE
Sbjct: 366 YQDTAESRPE 375


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 LDPAQPRP 9
LDPA P P
Sbjct: 433 LDPATPTP 440




118|SequenceR|595|586|ELDDDYLDPA

>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain ATCC

Query: 3 DDDYLDPA 10
D DYLDPA
Sbjct: 335 DTDYLDPA 342


>sp|COFH_METPE|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanosphaerula palustris (strain ATCC

Query: 3 DDDYLDPA 10
+ DYLDPA
Sbjct: 335 NTDYLDPA 342


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|CBID_SACI6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|CBID_SACI4|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|CBID_SACI3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DDDYLD 8
DDDYL+
Sbjct: 179 DDDYLE 184


>sp|TF2B_METPE|TRANSCRIPTION initiation factor IIB|Methanosphaerula palustris (strain ATCC

Query: 2 LDDDYLD 8
+DDD++D
Sbjct: 64 IDDDFID 70


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 2 LDDDYLD 8
+DDD++D
Sbjct: 64 IDDDFID 70


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELDDDYLD 8
E++DDYLD
Sbjct: 334 EINDDYLD 341


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ELDDDYLD 8
E++DDYLD
Sbjct: 334 EINDDYLD 341


>sp|FMDC_METWO|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 ELDDDYLD 8
+L DDY+D
Sbjct: 294 KLTDDYID 301


>sp|FMDC_METTM|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 ELDDDYLD 8
+L DDY+D
Sbjct: 294 KLTDDYID 301


>sp|FMDC_METTH|MOLYBDENUM-CONTAINING formylmethanofuran dehydrogenase 1 subunit|Methanothermobacter

Query: 1 ELDDDYLD 8
+L DDY+D
Sbjct: 294 KLTDDYID 301


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ELDDDYLDP 9
+++D YLDP
Sbjct: 795 KVNDTYLDP 803


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 1 ELDDDYL 7
ELDDD L
Sbjct: 12 ELDDDQL 18


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDDDYLD 8
+D+DYLD
Sbjct: 341 VDEDYLD 347


>sp|COFH_METHJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanospirillum hungatei JF-1 (strain

Query: 5 DYLDPA 10
+YLDPA
Sbjct: 337 EYLDPA 342


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 DDDYLD 8
+DDYLD
Sbjct: 338 NDDYLD 343


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 2 LDDDYLD 8
+DD+YLD
Sbjct: 1 MDDNYLD 7


>sp|AATB_HALLT|A-TYPE ATP synthase subunit B|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ELDDDYLDPA 10
ELD+ YLD A
Sbjct: 402 ELDNKYLDFA 411


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 DDDYLD 8
+DDYLD
Sbjct: 338 NDDYLD 343


>sp|AATB_HALMA|A-TYPE ATP synthase subunit B|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELDDDYLDPA 10
ELD+ YLD A
Sbjct: 401 ELDNKYLDFA 410


>sp|IDI2_HALSA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELDDDYLDPA 10
ELD D +DP+
Sbjct: 44 ELDYDAIDPS 53




119|SequenceR|600|591|SPPRFELDDD

>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii (strain

Query: 4 RFELDDD 10
RFELDD+
Sbjct: 124 RFELDDE 130


>sp|PURQ_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Halobacterium salinarum (strain ATCC 700922

Query: 4 RFELDDD 10
RFE+DDD
Sbjct: 145 RFEIDDD 151


>sp|NOP10_METJA|RIBOSOME biogenesis protein Nop10|Methanocaldococcus jannaschii (strain

Query: 2 PPRFELDD 9
PP+F L+D
Sbjct: 33 PPKFSLED 40


>sp|KDGA_SACS2|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PPRFELDDD 10
PP F LDD+
Sbjct: 276 PPIFPLDDE 284


>sp|RL15_METJA|LARGE ribosomal subunit protein uL15|Methanocaldococcus jannaschii

Query: 1 SPPRFELDDD 10
+P +FE +DD
Sbjct: 85 NPDKFEKEDD 94


>sp|KDGA_SACSO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Saccharolobus solfataricus (Sulfolobus solfataricus)

Query: 2 PPRFELDDD 10
PP F LDD+
Sbjct: 262 PPIFPLDDE 270


>sp|NOP10_ARCFU|RIBOSOME biogenesis protein Nop10|Archaeoglobus fulgidus (strain ATCC

Query: 2 PPRFELDD 9
PPRF ++D
Sbjct: 32 PPRFSIED 39


>sp|FER_THELI|FERREDOXIN litoralis

Query: 2 PPRFELDDD 10
P FE+DDD
Sbjct: 21 PDVFEMDDD 29


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPRFELDDD 10
PPRF DD
Sbjct: 193 PPRFRKLDD 201


>sp|UPP_PYRFU|URACIL phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PPRFELD 8
PP+FE++
Sbjct: 115 PPKFEIE 121


>sp|MOAC_METTH|PROBABLE cyclic pyranopterin monophosphate synthase|Methanothermobacter

Query: 5 FELDDD 10
F+LDDD
Sbjct: 90 FDLDDD 95




120|SequenceR|605|596|SSQPRSPPRF

>sp|THIE_METAC|THIAMINE-PHOSPHATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSQPRSPPR 9
+S P++PPR
Sbjct: 5 NSNPKNPPR 13


>sp|CBIA_PICTO|COBYRINATE a,c-diamide synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 SQPRSPPRF 10
S PR P RF
Sbjct: 425 SNPRIPERF 433


>sp|3MGH_AERPE|PUTATIVE 3-methyladenine DNA glycosylase|Aeropyrum pernix (strain ATCC

Query: 1 SSQPRSPPRF 10
S QP PPR
Sbjct: 101 SCQPLEPPRL 110


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 4 PRSPPRF 10
PR PPR
Sbjct: 102 PRRPPRL 108




121|SequenceR|610|601|YQQNDSSQPR

>sp|UBIX_AERPE|FLAVIN prenyltransferase UbiX|Aeropyrum pernix (strain ATCC 700893

Query: 1 YQQNDSSQP 9
Y +ND S P
Sbjct: 69 YMENDMSSP 77


>sp|SUCC_HALLT|SUCCINATE--COA ligase [ADP-forming] subunit beta|Halorubrum lacusprofundi (strain

Query: 1 YQQNDSSQ 8
Y++ND+S+
Sbjct: 180 YEENDASE 187




122|SequenceR|615|606|APACFYQQND

>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 2 PACFYQQND 10
P C ++QN+
Sbjct: 484 PGCVFRQNN 492


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PACFYQQND 10
P FY Q+D
Sbjct: 168 PVSFYTQDD 176


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 2 PACFYQQND 10
P C Y Q D
Sbjct: 510 PTCRYYQRD 518




123|SequenceR|620|611|SPSLPAPACF

>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 2 PSLPAPACF 10
P PAP C+
Sbjct: 91 PKCPAPQCY 99


>sp|RS6E_METBU|SMALL ribosomal subunit protein eS6|Methanococcoides burtonii (strain

Query: 1 SPSLPAP 7
SP+LP P
Sbjct: 63 SPTLPGP 69


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 PSLPAPACF 10
P P+P CF
Sbjct: 429 PLAPSPYCF 437


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 1 SPSLPAPA 8
SP LP PA
Sbjct: 215 SPDLPEPA 222


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 PSLPAPACF 10
P P P C+
Sbjct: 79 PKCPEPQCY 87




124|SequenceR|625|616|SRPRASPSLP

>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SRPRASPSL 9
+RPR PS+
Sbjct: 527 NRPRPKPSI 535


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 1 SRPRASPSLP 10
SRPRAS P
Sbjct: 499 SRPRASTGTP 508


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 4 RASPSLP 10
RASP+LP
Sbjct: 19 RASPALP 25




125|SequenceR|630|621|LKGWPSRPRA

>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis

Query: 4 WPSRPR 9
WPS+P+
Sbjct: 49 WPSKPK 54


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LKGWPSRPR 9
L WP +PR
Sbjct: 329 LAKWPIKPR 337


>sp|RL22_METST|LARGE ribosomal subunit protein uL22|Methanosphaera stadtmanae (strain

Query: 1 LKGWPS 6
LKGWPS
Sbjct: 76 LKGWPS 81


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LKGWPSRP 8
+KG+P RP
Sbjct: 587 VKGYPQRP 594


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 KGWPSRPR 9
+G PSRPR
Sbjct: 153 RGLPSRPR 160


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LKGWPSRPR 9
L GWPS R
Sbjct: 212 LDGWPSNVR 220


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 KGWPSRPRA 10
+G+P PRA
Sbjct: 338 EGYPDAPRA 346


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KGWPSRP 8
+G+P+RP
Sbjct: 589 RGYPNRP 595


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LKGWPSRP 8
++G+P+RP
Sbjct: 588 VRGYPNRP 595


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KGWPSRP 8
+G+P+RP
Sbjct: 587 RGYPTRP 593


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LKGWPSRP 8
+KG P+RP
Sbjct: 601 IKGSPNRP 608


>sp|PRIS_METB6|DNA primase small subunit PriS|Methanoregula boonei (strain DSM 21154

Query: 3 GWPSRPRA 10
GWP+R R+
Sbjct: 191 GWPARFRS 198


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 1 LKGWPSRP 8
L+ W SRP
Sbjct: 151 LREWASRP 158




126|SequenceR|635|626|SDYPDLKGWP

>sp|RL22_METST|LARGE ribosomal subunit protein uL22|Methanosphaera stadtmanae (strain

Query: 5 DLKGWP 10
DLKGWP
Sbjct: 75 DLKGWP 80


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DYPDLKGWP 10
DYP L G+P
Sbjct: 41 DYPSLSGFP 49


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYPDLKGWP 10
D PDL G+P
Sbjct: 78 DLPDLLGFP 86


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 DYPDLKGWP 10
D P L+ WP
Sbjct: 567 DVPSLRDWP 575


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain

Query: 3 YPDLKGWP 10
YP +K WP
Sbjct: 26 YPRIKTWP 33


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PDLKGWP 10
PDLKG P
Sbjct: 193 PDLKGKP 199


>sp|RL5_THEVO|LARGE ribosomal subunit protein uL5|Thermoplasma volcanium (strain ATCC

Query: 1 SDYPDLKG 8
SDY D KG
Sbjct: 102 SDYTDFKG 109


>sp|RL5_THEAC|LARGE ribosomal subunit protein uL5|Thermoplasma acidophilum (strain ATCC

Query: 1 SDYPDLKG 8
SDY D KG
Sbjct: 102 SDYTDFKG 109


>sp|RL5_PICTO|LARGE ribosomal subunit protein uL5|Picrophilus torridus (strain ATCC

Query: 1 SDYPDLKG 8
SDY D KG
Sbjct: 107 SDYTDFKG 114


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 YPDLKGWP 10
YP+LK +P
Sbjct: 275 YPELKKYP 282


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 2 DYPDLK 7
DYPD+K
Sbjct: 133 DYPDIK 138


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PDLKGW 9
PDLK W
Sbjct: 270 PDLKDW 275


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YPDLKGW 9
Y DL GW
Sbjct: 370 YEDLPGW 376


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 SDYPDLKG 8
+DY D+KG
Sbjct: 61 NDYADMKG 68


>sp|Y1307_METJA|UNCHARACTERIZED protein MJ1307|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYPDLKGW 9
DY L+GW
Sbjct: 98 DYITLQGW 105


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PDLKGW 9
PD+ GW
Sbjct: 64 PDMGGW 69


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PDLKGW 9
PDLK W
Sbjct: 271 PDLKEW 276


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 2 DYPDL 6
DYPDL
Sbjct: 91 DYPDL 95


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YPDLKGW 9
Y DL GW
Sbjct: 370 YEDLPGW 376


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DYPDLKGWP 10
DYPD+ P
Sbjct: 484 DYPDINTRP 492


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 DYPDL 6
DYPDL
Sbjct: 81 DYPDL 85


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SDYPDLK 7
+DYP+LK
Sbjct: 388 NDYPELK 394


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain

Query: 2 DYPDL 6
DYPDL
Sbjct: 81 DYPDL 85


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 4 PDLKGWP 10
PD+ WP
Sbjct: 338 PDVSDWP 344


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 2 DYPDLKGWP 10
+YP ++ WP
Sbjct: 189 EYPMIQRWP 197


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 YPDLKGWP 10
+PD KG P
Sbjct: 53 WPDWKGMP 60


>sp|TRPB1_SULTO|TRYPTOPHAN synthase beta chain 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DYPDLKG 8
DYPD G
Sbjct: 298 DYPDTAG 304


>sp|PUR7_METMJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SDYPDLKG 8
SDY DL+G
Sbjct: 163 SDYLDLRG 170


>sp|SAT_NITMS|SULFATE adenylyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SDYPDLKGWP 10
SDYP+L P
Sbjct: 303 SDYPELDIAP 312


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 SDYPDLKGW 9
+DYPD W
Sbjct: 358 ADYPDFGRW 366


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DYPDLKGW 9
DYPD+ W
Sbjct: 348 DYPDIGRW 355


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 SDYPDLKGW 9
S+Y L+GW
Sbjct: 583 SEYYKLRGW 591


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 DYPDL 6
DYPDL
Sbjct: 303 DYPDL 307


>sp|CSA1_THETK|CRISPR-ASSOCIATED exonuclease Csa1|Thermoproteus tenax (strain ATCC 35583

Query: 4 PDLKGW 9
P+L+GW
Sbjct: 25 PELRGW 30


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 DYPDLK 7
DYPDL+
Sbjct: 53 DYPDLE 58


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 4 PDLKGW 9
PDLKG+
Sbjct: 92 PDLKGY 97


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 DYPDL 6
DYPDL
Sbjct: 85 DYPDL 89


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 2 DYPDLKGW 9
DY D GW
Sbjct: 227 DYDDEGGW 234




127|SequenceR|640|631|KDDESSDYPD

>sp|MOAC_AERPE|PROBABLE cyclic pyranopterin monophosphate synthase|Aeropyrum pernix (strain

Query: 1 KDDESSDYPD 10
+ DE+ +YPD
Sbjct: 123 EKDETGNYPD 132


>sp|NDK_PYRAB|NUCLEOSIDE diphosphate kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDDESSDYP 9
+DDE DYP
Sbjct: 140 RDDEIFDYP 148


>sp|MOAC_THEAC|PROBABLE cyclic pyranopterin monophosphate synthase|Thermoplasma acidophilum

Query: 1 KDDESSDYPD 10
+ DES +YP+
Sbjct: 118 EKDESGNYPE 127


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KDDESSDYPD 10
KDD S ++PD
Sbjct: 411 KDDRSIEFPD 420


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DESSDYP 9
DE+ DYP
Sbjct: 37 DETVDYP 43


>sp|GUAAA_METB6|GMP synthase [glutamine-hydrolyzing] subunit A|Methanoregula boonei

Query: 2 DDESSDYPD 10
DD S YPD
Sbjct: 108 DDILSGYPD 116


>sp|SYFB_METJA|PHENYLALANINE--TRNA ligase beta subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KDDESSDYPD 10
KD++S+ YP+
Sbjct: 265 KDNQSTIYPN 274




128|SequenceR|645|636|FGVYEKDDES

>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGVYEKDD 8
GVYEKDD
Sbjct: 165 LGVYEKDD 172


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 143 GVYEKD 148


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 143 GVYEKD 148


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 143 GVYEKD 148


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 143 GVYEKD 148


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 143 GVYEKD 148


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 143 GVYEKD 148


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 144 GVYEKD 149


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 GVYEKDDES 10
G+Y+KD +S
Sbjct: 144 GIYDKDPKS 152


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FGVYEKD 7
FG+YEK+
Sbjct: 221 FGIYEKN 227


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 3 VYEKDDES 10
++EKDDE+
Sbjct: 199 LFEKDDET 206


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FGVYEKDD 8
F VYEKD+
Sbjct: 130 FKVYEKDE 137


>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain

Query: 1 FGVYEKDDES 10
GVY DDE+
Sbjct: 68 LGVYRGDDEN 77


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GVYEKD 7
GVYEKD
Sbjct: 113 GVYEKD 118


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGVYEKDDES 10
FG+ +KDD S
Sbjct: 43 FGIIKKDDLS 52


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 FGVYEKDDES 10
FG++E DE+
Sbjct: 126 FGIFEDPDEA 135


>sp|PYRH_METKA|URIDYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 GVYEKD 7
GVY+KD
Sbjct: 141 GVYDKD 146


>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 1 FGVYEKDDE 9
+G+ EKD E
Sbjct: 245 YGITEKDTE 253


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 FGVYEKDD 8
FGV EK+D
Sbjct: 204 FGVREKND 211


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FGVYEKDDES 10
F EKDDES
Sbjct: 39 FIAVEKDDES 48


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FGVYEKDDES 10
F EKDDES
Sbjct: 39 FIAVEKDDES 48


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FGVYEKDDES 10
F EKDDES
Sbjct: 39 FIAVEKDDES 48


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FGVYEKDDES 10
F EKDDES
Sbjct: 39 FIAVEKDDES 48


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YEKDDE 9
YEKDDE
Sbjct: 418 YEKDDE 423




129|SequenceR|650|641|NPLTAFGVYE

>sp|Y1757_ARCFU|UNCHARACTERIZED protein AF_1757|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLTAFGVY 9
PL FGVY
Sbjct: 94 PLALFGVY 101


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 2 PLTAFGV 8
PL AFGV
Sbjct: 78 PLEAFGV 84


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 AFGVYE 10
AFG+YE
Sbjct: 220 AFGIYE 225


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 2 PLTAFGVYE 10
P+ A+GVY+
Sbjct: 22 PVVAYGVYK 30


>sp|FLAB3_METJA|FLAGELLIN B3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPLTAFGV 8
NP T FGV
Sbjct: 136 NPTTEFGV 143


>sp|COXX_SULAC|PROTOHEME IX farnesyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NPLTAF 6
NPLTAF
Sbjct: 109 NPLTAF 114


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 NPLTAFGVY 9
+PLT G+Y
Sbjct: 286 DPLTGGGIY 294


>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NPLTAFGVY 9
+PLT G+Y
Sbjct: 286 DPLTGGGIY 294


>sp|RL4_METMJ|LARGE ribosomal subunit protein uL4|Methanoculleus marisnigri (strain

Query: 3 LTAFGVY 9
LTA GVY
Sbjct: 158 LTALGVY 164


>sp|PSB_ARCFU|PROTEASOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LTAFGVYE 10
LTA+GV E
Sbjct: 145 LTAYGVLE 152


>sp|IF5A_METMP|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain DSM 14266

Query: 3 LTAFGVYE 10
LTA G++E
Sbjct: 45 LTAMGIFE 52


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NPLTAFGVY 9
+PLT G+Y
Sbjct: 286 DPLTGGGIY 294


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPLTAFGVY 9
+PLT G+Y
Sbjct: 285 SPLTGGGIY 293


>sp|F16PA_NATPD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Natronomonas pharaonis (strain ATCC 35678

Query: 4 TAFGVYE 10
T FGVYE
Sbjct: 102 TLFGVYE 108


>sp|PSB_METLZ|PROTEASOME subunit beta|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LTAFGVYE 10
LTA+GV E
Sbjct: 145 LTAYGVLE 152


>sp|DAPAT_METST|LL-DIAMINOPIMELATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LTAFGVYE 10
LTAF YE
Sbjct: 390 LTAFNTYE 397


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 PLTAFGVYE 10
P A+G+Y+
Sbjct: 22 PFIAYGIYQ 30




130|SequenceR|655|646|KRHVQNPLTA

>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 RHVQNPLTA 10
+H+ NPLTA
Sbjct: 254 KHLPNPLTA 262


>sp|UPP_HALWD|URACIL phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HVQNPLT 9
HVQ PLT
Sbjct: 60 HVQTPLT 66


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RHVQNPLTA 10
R VQNP+T
Sbjct: 284 REVQNPVTG 292


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RHVQNPLTA 10
R VQNP+T
Sbjct: 284 RSVQNPVTG 292


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RHVQNPLTA 10
R VQNP+T
Sbjct: 284 RSVQNPVTG 292


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RHVQNPLTA 10
R VQNP+T
Sbjct: 284 RMVQNPVTG 292


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RHVQNPLTA 10
RH+ NPL A
Sbjct: 254 RHLPNPLEA 262


>sp|TRPG_THEKO|ANTHRANILATE synthase component 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RHVQNPLTA 10
R ++NPLTA
Sbjct: 114 RGIKNPLTA 122


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 2 RHVQNPLTA 10
RH+ NPL A
Sbjct: 254 RHLPNPLEA 262


>sp|EF1B_NITMS|ELONGATION factor 1-beta|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KRHVQNPL 8
KRH + PL
Sbjct: 37 KRHAKEPL 44


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 2 RHVQNPLT 9
++V+NPLT
Sbjct: 357 KYVRNPLT 364


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 KRHVQNPL 8
KRH NP+
Sbjct: 160 KRHSSNPV 167


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 RHVQNPLTA 10
+H+ NPL A
Sbjct: 254 KHLPNPLQA 262


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 RHVQNPLTA 10
+H+ NPL A
Sbjct: 254 KHLPNPLQA 262


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 RHVQNPLTA 10
+H+ NPL A
Sbjct: 254 KHLPNPLQA 262


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 1 KRHVQN 6
K+HVQN
Sbjct: 18 KKHVQN 23


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RHVQNPLTA 10
+H+ NPL A
Sbjct: 254 KHLPNPLQA 262


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 1 KRHVQN 6
K+HVQN
Sbjct: 18 KKHVQN 23


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 HVQNPLTA 10
H NP+TA
Sbjct: 280 HKMNPITA 287


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 RHVQNPLTA 10
RH+ NP+ A
Sbjct: 254 RHLPNPVEA 262




131|SequenceR|660|651|GKKVSKRHVQ

>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GKKVSKRHVQ 10
GKK++K H Q
Sbjct: 39 GKKLTKIHPQ 48


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GKKVSKRH 8
G+K+SKR+
Sbjct: 515 GRKMSKRY 522




132|SequenceR|665|656|LTFDFGKKVS

>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LTFDFGKK 8
LTFD+G++
Sbjct: 30 LTFDYGQR 37


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 FDFGKKVS 10
DFGKK+S
Sbjct: 38 LDFGKKLS 45


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTFDFGKKVS 10
L+F++G+K S
Sbjct: 33 LSFNYGQKAS 42


>sp|MOAC_PYRHO|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus horikoshii

Query: 1 LTFDFGK 7
+TFDFG+
Sbjct: 86 ITFDFGE 92


>sp|MOAC_PYRFU|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus furiosus

Query: 1 LTFDFGK 7
+TFDFG+
Sbjct: 84 ITFDFGE 90


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LTFDFGKK 8
+TFD+G++
Sbjct: 29 ITFDYGQR 36


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LTFDFGKK 8
+TFD+G++
Sbjct: 30 ITFDYGQR 37


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LTFDFGKK 8
+TFD+G++
Sbjct: 30 ITFDYGQR 37


>sp|QUEC_METAC|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LTFDFGKK 8
+TFD+G++
Sbjct: 30 ITFDYGQR 37


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LTFDFGKK 8
L FD GKK
Sbjct: 35 LEFDIGKK 42


>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 TFDFGKKVS 10
T+DFGK +S
Sbjct: 41 TYDFGKLLS 49


>sp|Y980_PYRAB|UPF0282 protein PYRAB09800|Pyrococcus abyssi (strain GE5 /

Query: 2 TFDFGK 7
TFDFG+
Sbjct: 142 TFDFGE 147


>sp|QUEC_META3|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LTFDFGKKV 9
+TFD+G++
Sbjct: 30 ITFDYGQRA 38


>sp|DPHB_METM5|DIPHTHINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 TFDFGKKV 9
T DF KKV
Sbjct: 19 TLDFAKKV 26


>sp|DPHB_METM7|DIPHTHINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 TFDFGKKV 9
T DF KKV
Sbjct: 19 TLDFAKKV 26


>sp|DPHB_METMP|DIPHTHINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 TFDFGKKV 9
T DF KKV
Sbjct: 19 TLDFAKKV 26


>sp|DPHB_METM6|DIPHTHINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 TFDFGKKV 9
T DF KKV
Sbjct: 19 TLDFAKKV 26


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TFDFGKKV 9
T+DFGK +
Sbjct: 46 TYDFGKAL 53


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 2 TFDFGKKVS 10
T D G+KVS
Sbjct: 83 TIDIGEKVS 91


>sp|SPEE_THEVO|POLYAMINE aminopropyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TFDFGK 7
T+DFGK
Sbjct: 41 TYDFGK 46


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 1 LTFDFG 6
+TFDFG
Sbjct: 187 MTFDFG 192


>sp|CBIT_METM5|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 LTFDFGKKVS 10
L+ +GKK+S
Sbjct: 153 LSVSYGKKIS 162


>sp|SPEE_THEAC|POLYAMINE aminopropyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 TFDFGK 7
T+DFGK
Sbjct: 41 TYDFGK 46




133|SequenceR|670|661|EGAVMLTFDF

>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 GAVMLTFD 9
GAV LTFD
Sbjct: 56 GAVSLTFD 63


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GAVMLTFDF 10
GA+M+ DF
Sbjct: 154 GAIMILVDF 162


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 2 GAVMLTFDF 10
GA+M+ DF
Sbjct: 154 GAIMILVDF 162


>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GAVMLTFD 9
GAV+LT D
Sbjct: 127 GAVLLTVD 134


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GAVMLTFD 9
GAV+LT D
Sbjct: 127 GAVLLTVD 134




134|SequenceR|675|666|KGLGSEGAVM

>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 111 QGIGISGAVM 120


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 111 QGIGISGAVM 120


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 111 QGIGISGAVM 120


>sp|AGOG_PYRFU|N-GLYCOSYLASE/DNA lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGLGSEGA 8
KG+G EGA
Sbjct: 9 KGIGIEGA 16


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 LGSEGAVM 10
+GSEGA+M
Sbjct: 226 MGSEGALM 233


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 111 QGIGISGAVM 120


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 111 QGIGISGAVM 120


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 111 QGIGISGAVM 120


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 KGLGSEGAVM 10
+G+G GAVM
Sbjct: 113 QGIGISGAVM 122


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KGLGSEGAVM 10
+G+GS+G ++
Sbjct: 689 RGIGSQGMLL 698


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 GLGSEGAVM 10
GLG+EG M
Sbjct: 344 GLGAEGISM 352


>sp|ATGT_METTH|TRNA-GUANINE(15) transglycosylase|Methanothermobacter thermautotrophicus (strain

Query: 3 LGSEGAV 9
LG+EGAV
Sbjct: 562 LGAEGAV 568


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGLGSEGAVM 10
+G+GS GA+M
Sbjct: 382 RGMGSLGAMM 391


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 KGLGSEGAVM 10
+G+GS GA+M
Sbjct: 382 RGMGSLGAMM 391


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGLGSEGAVM 10
+G+GS GA+M
Sbjct: 382 RGMGSLGAMM 391


>sp|CHEB2_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 2|Methanospirillum

Query: 2 GLGSEGA 8
G+GS+GA
Sbjct: 286 GMGSDGA 292




135|SequenceR|680|671|NVLTSKGLGS

>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 NVLTSKGLG 9
+V T+KGLG
Sbjct: 266 DVYTAKGLG 274


>sp|CHED_METHJ|PROBABLE chemoreceptor glutamine deamidase CheD|Methanospirillum hungatei

Query: 2 VLTSKGLGS 10
V+TS GLGS
Sbjct: 27 VMTSIGLGS 35


>sp|IF6_THEVO|TRANSLATION initiation factor 6|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VLTSKGL 8
VLTSKG+
Sbjct: 148 VLTSKGM 154




136|SequenceR|685|676|TLFLSNVLTS

>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus jannaschii

Query: 1 TLFLSNVL 8
T F+SNVL
Sbjct: 158 TFFISNVL 165


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 1 TLFLSNVL 8
TLFL+N++
Sbjct: 108 TLFLANIV 115


>sp|PSB2_IGNH4|PROTEASOME subunit beta 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 FLSNVLTS 10
FLSNVL S
Sbjct: 95 FLSNVLHS 102




137|SequenceR|690|681|DRYLDTLFLS

>sp|HEM1_METM5|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C5 /

Query: 2 RYLDTLFL 9
RYLD+LFL
Sbjct: 112 RYLDSLFL 119


>sp|HEM1_METM7|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C7 /

Query: 2 RYLDTLFL 9
RYLD+LFL
Sbjct: 112 RYLDSLFL 119


>sp|HEM1_METM6|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain C6 /

Query: 2 RYLDTLFL 9
RYLD LFL
Sbjct: 112 RYLDGLFL 119


>sp|HEM1_META3|GLUTAMYL-TRNA reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RYLDTLFL 9
+YLDT+FL
Sbjct: 109 KYLDTIFL 116


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DRYLDTLFLS 10
D+Y+D FLS
Sbjct: 721 DKYIDKWFLS 730


>sp|HEM1_METMP|GLUTAMYL-TRNA reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 RYLDTLFL 9
RYLD++FL
Sbjct: 112 RYLDSVFL 119


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DRYLDTLFLS 10
DR++D LFL+
Sbjct: 382 DRFVDFLFLA 391


>sp|Y1153_METTH|UNCHARACTERIZED protein MTH_1153|Methanothermobacter thermautotrophicus (strain

Query: 1 DRYLDTLFLS 10
DR+ D +F+S
Sbjct: 470 DRFRDCIFVS 479


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 DRYLDTLFLS 10
DRY+D FL+
Sbjct: 317 DRYVDGSFLA 326


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DRYLDT 6
D+YLDT
Sbjct: 206 DKYLDT 211


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DRYLDT 6
D+YLDT
Sbjct: 206 DKYLDT 211


>sp|CDC6_THEON|ORC1-TYPE DNA replication protein|Thermococcus onnurineus (strain NA1)

Query: 1 DRYLDTLF 8
D YLD++F
Sbjct: 3 DNYLDSIF 10


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DRYLDTLFLS 10
D Y+D+ FLS
Sbjct: 316 DAYVDSSFLS 325




138|SequenceR|695|686|GLLKRDRYLD

>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GLLKRDRYL 9
GLL RDR L
Sbjct: 216 GLLARDRTL 224


>sp|T1R2_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 LLKRDRYLD 10
LLKR+R LD
Sbjct: 222 LLKRERVLD 230


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLLKRDRYL 9
GL++RDR L
Sbjct: 355 GLVRRDRPL 363


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 LKRDRYLD 10
+KRD YLD
Sbjct: 347 IKRDSYLD 354


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLLKRDRY 8
GL+K+D+Y
Sbjct: 184 GLIKQDKY 191


>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 1 GLLKRDRY 8
GLL+ DRY
Sbjct: 63 GLLQGDRY 70


>sp|AROC_PYRIL|CHORISMATE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GLLKRDRYLD 10
GL++RD+ L+
Sbjct: 355 GLIRRDKPLE 364


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LLKRDRYL 9
+LK+D+YL
Sbjct: 216 ILKKDKYL 223


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 RDRYLD 10
RD+YLD
Sbjct: 205 RDKYLD 210


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 RDRYLD 10
RD+YLD
Sbjct: 205 RDKYLD 210


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 2 LLKRDR 7
LLKRDR
Sbjct: 471 LLKRDR 476


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GLLKRDRYLD 10
G+LK RY D
Sbjct: 316 GVLKMGRYAD 325


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 3 LKRDRYLD 10
+KRD YL+
Sbjct: 113 IKRDEYLE 120


>sp|RS15_METB6|SMALL ribosomal subunit protein uS15|Methanoregula boonei (strain DSM

Query: 1 GLLKRDRY 8
GL+ RDRY
Sbjct: 51 GLVLRDRY 58


>sp|RS15_METMJ|SMALL ribosomal subunit protein uS15|Methanoculleus marisnigri (strain

Query: 1 GLLKRDRY 8
GL+ RDRY
Sbjct: 51 GLVLRDRY 58




139|SequenceR|700|691|IREEAGLLKR

>sp|AROA_PICTO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 IREEAGLLKR 10
I EEA LLKR
Sbjct: 105 IHEEASLLKR 114


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IREEAGLLKR 10
+REEAG L R
Sbjct: 182 LREEAGTLTR 191


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 3 EEAGLLKR 10
EE+GL+KR
Sbjct: 106 EESGLIKR 113


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IREEAGLLKR 10
IR AGLLK+
Sbjct: 144 IRSLAGLLKK 153


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IREEAGLLKR 10
IR AGLLK+
Sbjct: 144 IRSLAGLLKK 153




140|SequenceR|705|696|EVTQMIREEA

>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVTQMIREEA 10
E+ QM+REE
Sbjct: 480 EIVQMLREEG 489


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 EVTQMIRE 8
E+T+MIRE
Sbjct: 485 EITRMIRE 492


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EVTQMIRE 8
E+T+MIRE
Sbjct: 485 EITRMIRE 492


>sp|MANB_METJA|PHOSPHOMANNOMUTASE jannaschii (strain ATCC 43067

Query: 1 EVTQMIREEA 10
E+T+ I+EEA
Sbjct: 130 ELTESIKEEA 139


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 EVTQMIREE 9
E T+MIRE+
Sbjct: 492 ETTRMIRED 500


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 EVTQMIRE 8
E+T+M+RE
Sbjct: 485 EITRMLRE 492


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 EVTQMIRE 8
E+T+M+RE
Sbjct: 485 EITRMLRE 492


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 EVTQMIREEA 10
E+T REEA
Sbjct: 613 EITDFAREEA 622




141|SequenceR|710|701|AHKTIEVTQM

>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 1 AHKTIEVT 8
+H+T+E+T
Sbjct: 353 SHETVEIT 360




142|SequenceR|715|706|EEIDVAHKTI

>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 2 EIDVAHKTI 10
EIDV++KT+
Sbjct: 95 EIDVSYKTV 103


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 EEIDVAHKTI 10
EE+D+ H+T+
Sbjct: 186 EEVDLYHRTV 195


>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EEIDVAHKTI 10
E++DV HK I
Sbjct: 109 EQLDVMHKAI 118


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 EEIDVAHKTI 10
+EID+ H+ I
Sbjct: 198 KEIDIVHRAI 207


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 3 IDVAHK 8
IDVAHK
Sbjct: 73 IDVAHK 78


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 3 IDVAHKTI 10
+DV HKT+
Sbjct: 46 VDVDHKTM 53


>sp|HISX_METTH|HISTIDINOL dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EEIDVAHKTI 10
EEI+ AHK +
Sbjct: 66 EEIEEAHKNL 75


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 1 EEIDVAH 7
+EID+AH
Sbjct: 15 QEIDLAH 21




143|SequenceR|720|711|LRVGKEEIDV

>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LRVGKEEIDV 10
LRV KEE+DV
Sbjct: 142 LRVEKEEVDV 151


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LRVGKEEID 9
LRVG++E+D
Sbjct: 758 LRVGRDEVD 766


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 LRVGKEEID 9
LR+GKE ID
Sbjct: 90 LRIGKEVID 98


>sp|RNP2_METM6|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain C6 /

Query: 1 LRVGKEEID 9
LR+ +EE+D
Sbjct: 65 LRISREEVD 73


>sp|RNP2_METMP|RIBONUCLEASE P protein component 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 LRVGKEEIDV 10
LR+ +EE+D
Sbjct: 65 LRISREEVDT 74


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LRVGKEEI 8
L++GKEEI
Sbjct: 210 LKIGKEEI 217


>sp|ARCR_HALS3|PROBABLE HTH-type transcriptional regulator ArcR|Halobacterium salinarum

Query: 2 RVGKEEID 9
R+G+EEID
Sbjct: 91 RLGREEID 98


>sp|RNP2_META3|RIBONUCLEASE P protein component 2|Methanococcus aeolicus (strain ATCC

Query: 1 LRVGKEEID 9
LR+ +EE+D
Sbjct: 65 LRITREEVD 73


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 RVGKEEIDV 10
R GK+EI+V
Sbjct: 373 RAGKDEIEV 381


>sp|ORNAT_THEKO|ORNITHINE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LRVGKEEIDV 10
L V KEEIDV
Sbjct: 422 LIVTKEEIDV 431


>sp|ACEB_HALVD|MALATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 LRVGKEEIDV 10
LR+G EID+
Sbjct: 372 LRIGGTEIDI 381




144|SequenceR|725|716|VITLRLRVGK

***** No hits found ******


145|SequenceR|730|721|FGPTDVITLR

>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 FGPTDVI 7
FGPTDV+
Sbjct: 149 FGPTDVL 155


>sp|DPHB_PYRIL|DIPHTHINE synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GPTDVITLR 10
GP DV TLR
Sbjct: 35 GPLDVATLR 43


>sp|NNRD_CENSY|ADP-DEPENDENT (S)-NAD(P)H-hydrate dehydratase|Cenarchaeum symbiosum (strain A)

Query: 2 GPTDVIT 8
GPTDVI+
Sbjct: 197 GPTDVIS 203


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain

Query: 1 FGPTDVITL 9
FG TDVIT+
Sbjct: 69 FGGTDVITI 77


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 FGPTDVITLR 10
FG D ITLR
Sbjct: 474 FGDLDPITLR 483


>sp|DPHB_PYRCJ|DIPHTHINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GPTDVITLR 10
GP DV TLR
Sbjct: 35 GPIDVETLR 43


>sp|DPHB_PYRNV|DIPHTHINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GPTDVITLR 10
GP DV TLR
Sbjct: 35 GPIDVETLR 43


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 1 FGPTDVIT 8
FGP DV++
Sbjct: 237 FGPHDVVS 244


>sp|SYDND_METVS|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 FGPTDVITLR 10
G DVIT+R
Sbjct: 72 LGKEDVITIR 81


>sp|CETZ3_HALVD|TUBULIN-LIKE protein CetZ3|Haloferax volcanii (strain ATCC 29605

Query: 2 GPTDVITLR 10
GP+DV++ R
Sbjct: 296 GPSDVLSRR 304


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 1 FGPTDVITL 9
FGPT+V L
Sbjct: 109 FGPTEVEVL 117


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 1 FGPTDVITL 9
+GP VIT+
Sbjct: 151 YGPESVITI 159




146|SequenceR|735|726|NVADGFGPTD

>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 4 DGFGPT 9
DGFGPT
Sbjct: 232 DGFGPT 237


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 4 DGFGPT 9
DGFGPT
Sbjct: 232 DGFGPT 237


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 DGFGPTD 10
DGFG TD
Sbjct: 95 DGFGSTD 101


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GFGPTD 10
GF PTD
Sbjct: 71 GFAPTD 76


>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NVADGFGP 8
NV++G GP
Sbjct: 12 NVSEGHGP 19


>sp|AATC_THEGJ|A-TYPE ATP synthase subunit C|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VADGFGP 8
+ADGF P
Sbjct: 348 IADGFEP 354


>sp|PAN_SACI7|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 DGFGPTD 10
DGF P D
Sbjct: 266 DGFNPLD 272


>sp|PAN_SACI6|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 DGFGPTD 10
DGF P D
Sbjct: 266 DGFNPLD 272


>sp|PAN_SACI4|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 DGFGPTD 10
DGF P D
Sbjct: 266 DGFNPLD 272


>sp|PAN_SACI3|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 DGFGPTD 10
DGF P D
Sbjct: 266 DGFNPLD 272


>sp|PAN_SACI2|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 DGFGPTD 10
DGF P D
Sbjct: 266 DGFNPLD 272


>sp|PAN_SACI1|PROTEASOME-ACTIVATING nucleotidase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 DGFGPTD 10
DGF P D
Sbjct: 266 DGFNPLD 272


>sp|TAW21_SACS2|TRNA 4-demethylwyosine(37)-methyltransferase Taw21|Saccharolobus

Query: 1 NVADGFGP 8
N+ GFGP
Sbjct: 123 NMFSGFGP 130


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 NVADGFGPTD 10
++A G GP D
Sbjct: 330 HIAPGHGPED 339


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 4 DGFGP 8
DGFGP
Sbjct: 20 DGFGP 24


>sp|URIC_HALJB|URICASE jeotgali (strain DSM 18796

Query: 4 DGFGPTD 10
DGF P+D
Sbjct: 123 DGFDPSD 129


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 NVADGFGPTD 10
VAD GP D
Sbjct: 389 RVADVLGPVD 398


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 NVADGFGPTD 10
VAD GP D
Sbjct: 389 RVADVLGPVD 398




147|SequenceR|740|731|WCETNNVADG

>sp|G3P_METTH|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 WCETNNVADG 10
W E+ NV DG
Sbjct: 282 WEESINVVDG 291


>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 WCETNNVADG 10
W E+ N+ DG
Sbjct: 283 WEESLNIVDG 292


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 WCETNNVADG 10
W E+ N+ DG
Sbjct: 283 WEESLNIVDG 292


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 WCETNNVADG 10
WC T N++ G
Sbjct: 230 WCITRNMSWG 239


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 2 CETNNVADG 10
C T N +DG
Sbjct: 194 CGTTNFSDG 202


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC

Query: 3 ETNNVADG 10
ET+N ADG
Sbjct: 18 ETSNDADG 25


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 WCETNNVADG 10
W E+ NV DG
Sbjct: 290 WEESINVEDG 299


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 3 ETNNVADG 10
E N +ADG
Sbjct: 6 EVNEIADG 13




148|SequenceR|745|736|EAVPKWCETN

>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AVPKWCETN 10
AVP W E+N
Sbjct: 453 AVPAWTESN 461


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 1 EAVPKWCETN 10
+ +P+WC+ +
Sbjct: 20 DKLPEWCDVS 29


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EAVPKW 6
+A+PKW
Sbjct: 237 KAIPKW 242


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 1 EAVPKWCE 8
EAVPK+ E
Sbjct: 313 EAVPKFVE 320


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 WCETN 10
WCE+N
Sbjct: 432 WCESN 436


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KWCE 8
KWCE
Sbjct: 196 KWCE 199


>sp|Y769_METJA|UNCHARACTERIZED protein MJ0769|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VPKWCETN 10
+P+W E N
Sbjct: 9 IPRWDEIN 16


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VPKWCET 9
VP W ET
Sbjct: 446 VPNWVET 452




149|SequenceR|750|741|QQDIYEAVPK

>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QDIYEAV 8
QD+YEAV
Sbjct: 164 QDVYEAV 170


>sp|Y939_AERPE|UPF0248 protein APE_0939|Aeropyrum pernix (strain ATCC 700893

Query: 1 QQDIYEAV 8
+ DIYEAV
Sbjct: 5 RSDIYEAV 12


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QQDIYEAVPK 10
++DIYE V K
Sbjct: 8 RKDIYEIVSK 17


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QDIYEAVPK 10
+DI+EAV K
Sbjct: 75 EDIHEAVEK 83


>sp|RL1_METTH|LARGE ribosomal subunit protein uL1|Methanothermobacter

Query: 1 QQDIYEAVPK 10
QQ+I EAV K
Sbjct: 2 QQEIMEAVKK 11


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 3 DIYEAVP 9
D+Y+AVP
Sbjct: 51 DLYDAVP 57


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 DIYEAVP 9
D+Y+A+P
Sbjct: 49 DVYDAIP 55


>sp|ASPD_METBU|L-ASPARTATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QQDIYEAVP 9
QQ +Y+ VP
Sbjct: 73 QQAVYDVVP 81


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QQDIYEAV 8
+ DIYEA+
Sbjct: 333 KSDIYEAI 340


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 2 QDIYEAVPK 10
+D+YEA+ K
Sbjct: 246 RDLYEAIKK 254


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IYEAVP 9
IYEA+P
Sbjct: 200 IYEAIP 205


>sp|TBP_THEKO|TATA-BOX-BINDING protein|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QQDIYEAVPK 10
+QD +EAV K
Sbjct: 164 EQDAWEAVKK 173


>sp|TBP_PYROC|TATA-BOX-BINDING protein|Pyrodictium occultum

Query: 1 QQDIYEAVPK 10
++++YEAV K
Sbjct: 176 EEEVYEAVNK 185




150|SequenceR|755|746|FYQEFQQDIY

>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 FYQEFQQDIY 10
Y+EF+ D+Y
Sbjct: 321 LYREFESDLY 330


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FYQEFQQDIY 10
FY+EF DI+
Sbjct: 299 FYEEFGWDIF 308


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYQEFQQDIY 10
FY EFQ I+
Sbjct: 110 FYAEFQGIIF 119


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 FYQEFQQDIY 10
FY+ ++QD +
Sbjct: 180 FYEWYRQDFF 189


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YQEFQQDIY 10
Y EF DIY
Sbjct: 47 YDEFDVDIY 55


>sp|PDXS_PYRHO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrococcus horikoshii (strain

Query: 2 YQEFQQDIY 10
Y+E +DIY
Sbjct: 228 YREIVEDIY 236


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 2 YQEFQQDIY 10
Y++F DIY
Sbjct: 47 YEDFDVDIY 55


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FYQEFQQDIY 10
Y E ++D+Y
Sbjct: 308 LYNELKEDLY 317


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YQEFQQDIY 10
Y++F DIY
Sbjct: 47 YEDFDIDIY 55


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 FYQEFQQDIY 10
FY E Q++Y
Sbjct: 138 FYAENNQEVY 147


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FYQEFQQDIY 10
FY E Q++Y
Sbjct: 138 FYAENNQEVY 147


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YQEFQQDIY 10
Y++F DIY
Sbjct: 47 YEDFDVDIY 55


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain

Query: 3 QEFQQDIY 10
++FQ+DIY
Sbjct: 30 KKFQEDIY 37


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 FYQEFQQDIY 10
FY E Q++Y
Sbjct: 139 FYAENNQEVY 148




151|SequenceR|760|751|GSEDRFYQEF

>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDRFYQEF 10
E RFY+EF
Sbjct: 296 ESRFYEEF 303


>sp|PSB_METRM|PROTEASOME subunit beta|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 EDRFYQE 9
EDRFY++
Sbjct: 146 EDRFYED 152


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 GSEDRFYQEF 10
GSEDR +E
Sbjct: 654 GSEDRLEEEL 663


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSEDRFYQ 8
G+ED FY+
Sbjct: 70 GTEDTFYR 77


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 DRFYQEF 10
D+FYQE
Sbjct: 178 DKFYQEL 184


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EDRFYQE 9
+DRFY+E
Sbjct: 317 DDRFYKE 323


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SEDRFYQEF 10
S D FYQ+F
Sbjct: 164 SADEFYQKF 172


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 3 EDRFYQE 9
ED+FY+E
Sbjct: 319 EDKFYKE 325


>sp|PSB_ARCFU|PROTEASOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SEDRFYQ 8
+ED FYQ
Sbjct: 192 TEDEFYQ 198


>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 GSEDRFYQEF 10
G +D FYQ+
Sbjct: 209 GLQDSFYQKL 218




152|SequenceR|765|756|NKRNLGSEDR

>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 3 RNLGSEDR 10
R LGS+DR
Sbjct: 372 RTLGSDDR 379


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 KRNLGSEDR 10
+RN+ +EDR
Sbjct: 134 RRNIPTEDR 142


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 5 LGSEDR 10
LGSEDR
Sbjct: 375 LGSEDR 380




153|SequenceR|770|761|RNDQINKRNL

>sp|CBIM_HALS3|PUTATIVE cobalt transport protein CbiM|Halobacterium salinarum (strain

Query: 1 RNDQINKRNL 10
RND++NK ++
Sbjct: 36 RNDELNKSHI 45


>sp|RADB_METS3|DNA repair and recombination protein|Methanobrevibacter smithii (strain

Query: 1 RNDQINKR 8
RND+ NKR
Sbjct: 201 RNDEFNKR 208


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 2 NDQINKR 8
ND+INKR
Sbjct: 87 NDEINKR 93


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 1 RNDQIN 6
RNDQIN
Sbjct: 39 RNDQIN 44




154|SequenceR|775|766|LCCHVRNDQI

>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CCHVRN 7
CC VRN
Sbjct: 58 CCFVRN 63


>sp|NEP1_THEON|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus onnurineus

Query: 4 HVRNDQI 10
H RND++
Sbjct: 87 HTRNDEV 93


>sp|NEP1_THEKO|RIBOSOMAL RNA small subunit methyltransferase|Thermococcus kodakarensis

Query: 4 HVRNDQI 10
H RND++
Sbjct: 87 HTRNDEV 93


>sp|NEP1_PYRFU|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus furiosus (strain

Query: 4 HVRNDQI 10
H RND++
Sbjct: 90 HTRNDEV 96




155|SequenceR|780|771|PSIFYLCCHV

>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PSIFYLC 7
P I+Y+C
Sbjct: 257 PEIYYVC 263


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PSIFYLC 7
P I+Y+C
Sbjct: 256 PEIYYVC 262


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PSIFYLC 7
P I+Y+C
Sbjct: 256 PEIYYVC 262


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 4 FYLCCH 9
FYLC H
Sbjct: 116 FYLCEH 121




156|SequenceR|785|776|LGHGFPSIFY

>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 1 LGHGFPSIF 9
L HG+P +F
Sbjct: 198 LNHGYPRVF 206


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HGFPSIFY 10
H FP +FY
Sbjct: 40 HNFPPLFY 47


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GHGFPSIF 9
GH FP IF
Sbjct: 104 GHSFPRIF 111


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 2 GHGFPSIFY 10
GHG P++ Y
Sbjct: 132 GHGLPTVSY 140


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FPSIFY 10
FP+IFY
Sbjct: 78 FPAIFY 83


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 1 LGHGFPSIF 9
L HG+P F
Sbjct: 198 LNHGYPRAF 206


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GHGFPSIFY 10
G G PS++Y
Sbjct: 169 GQGEPSLYY 177


>sp|GSA_METPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LGHGFPSI 8
LGH FP++
Sbjct: 62 LGHAFPAV 69


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HGFPSI 8
HGFP I
Sbjct: 64 HGFPEI 69


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LGHGFPSI 8
LGHG P++
Sbjct: 63 LGHGHPAV 70


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGHGFPSI 8
L HGFP++
Sbjct: 240 LQHGFPAL 247


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 LGHGFPS 7
+G GFPS
Sbjct: 430 MGFGFPS 436


>sp|Y2401_ARCFU|UNCHARACTERIZED protein AF_2401|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGHGFPSIF 9
L HG+P F
Sbjct: 82 LSHGYPQYF 90


>sp|MTRD_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter marburgensis

Query: 2 GHGFPSIFY 10
GHG P++ +
Sbjct: 125 GHGLPTVCF 133


>sp|MTRD_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina acetivorans (strain

Query: 2 GHGFPSIFY 10
GHG P++ +
Sbjct: 132 GHGLPTVSF 140


>sp|MTRD_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 2 GHGFPSIFY 10
GHG P++ +
Sbjct: 137 GHGIPTVCF 145


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 2 GHGFPSIFY 10
GHG P++ +
Sbjct: 134 GHGVPTVCF 142


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 GHGFPSIFY 10
GHG P++ +
Sbjct: 132 GHGIPTVSF 140


>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGHGFPSI 8
LGH PSI
Sbjct: 151 LGHEHPSI 158




157|SequenceR|790|781|VDLPRLGHGF

>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 VDLPRLGHG 9
+DL +LGHG
Sbjct: 175 IDLSKLGHG 183


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VDLPRLGHG 9
+DL ++GHG
Sbjct: 174 IDLSKMGHG 182


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 VDLPRLGHG 9
+DL ++GHG
Sbjct: 174 IDLSKMGHG 182


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 3 LPRLGHGF 10
LP LGH F
Sbjct: 294 LPPLGHAF 301


>sp|AROC_METBU|CHORISMATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DLPRLGHG 9
DLPR GH
Sbjct: 100 DLPRPGHA 107


>sp|TOP6A_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VDLPRLGHG 9
+DL + GHG
Sbjct: 176 IDLSKTGHG 184


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LPRLGHGF 10
LP LGH F
Sbjct: 294 LPPLGHAF 301


>sp|METK_METKA|S-ADENOSYLMETHIONINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 PRLGHG 9
P++GHG
Sbjct: 133 PKIGHG 138


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DLPRLGHG 9
D P LGH
Sbjct: 35 DYPHLGHA 42


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DLPRLGHG 9
D P LGH
Sbjct: 35 DYPHLGHA 42


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLPRLGHG 9
D P LGH
Sbjct: 34 DYPHLGHA 41


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DLPRLGHG 9
D P LGH
Sbjct: 35 DYPHLGHA 42


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VDLPRLGH 8
VD+ R+GH
Sbjct: 554 VDVQRVGH 561


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VDLPRLGH 8
VD+ R+GH
Sbjct: 554 VDVQRVGH 561


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VDLPRLGH 8
VD+ R+GH
Sbjct: 559 VDVQRVGH 566


>sp|RS15_HYPBU|SMALL ribosomal subunit protein uS15|Hyperthermus butylicus (strain DSM

Query: 1 VDLPRLGHG 9
VDL R G+G
Sbjct: 37 VDLARKGYG 45




158|SequenceR|795|786|AKMFEVDLPR

>sp|PYRI_METM7|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 2 KMFEVDLPR 10
K F+VDLP+
Sbjct: 90 KKFKVDLPK 98


>sp|PYRI_METM5|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 2 KMFEVDLPR 10
K F+VDLP+
Sbjct: 90 KKFKVDLPK 98


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 AKMFEVDLPR 10
A++ EVD+P+
Sbjct: 17 AELVEVDIPK 26


>sp|GCSH3_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 1 AKMFEVDLPR 10
K+F+V +PR
Sbjct: 43 GKIFQVSVPR 52


>sp|PYRI_METMP|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 2 KMFEVDLPR 10
K F+VD+P+
Sbjct: 90 KKFKVDIPK 98


>sp|Y1513_METJA|UNCHARACTERIZED protein MJ1513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FEVDLPR 10
FEV LPR
Sbjct: 183 FEVTLPR 189


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 4 FEVDLPR 10
FE+D PR
Sbjct: 215 FEIDRPR 221




159|SequenceR|800|791|VRQHLAKMFE

>sp|RL31_HALSA|LARGE ribosomal subunit protein eL31|Halobacterium salinarum (strain

Query: 1 VRQHLAKMF 9
+RQHLAK F
Sbjct: 34 IRQHLAKQF 42


>sp|RL31_HALS3|LARGE ribosomal subunit protein eL31|Halobacterium salinarum (strain

Query: 1 VRQHLAKMF 9
+RQHLAK F
Sbjct: 34 IRQHLAKQF 42


>sp|RL31_HALLT|LARGE ribosomal subunit protein eL31|Halorubrum lacusprofundi (strain

Query: 1 VRQHLAKMF 9
VR+HLA+ F
Sbjct: 34 VREHLAQHF 42


>sp|RL31_HALMA|LARGE ribosomal subunit protein eL31|Haloarcula marismortui (strain

Query: 1 VRQHLAKMF 9
+R+HLAK F
Sbjct: 34 IREHLAKHF 42


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 2 RQHLAKMFE 10
R+ LAK+FE
Sbjct: 432 RKGLAKLFE 440




160|SequenceR|805|796|IPVINVRQHL

>sp|IMDH_HALSA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IPVINVRQHL 10
+P++N QHL
Sbjct: 197 VPIVNDEQHL 206


>sp|HEM3_METBU|PROBABLE porphobilinogen deaminase|Methanococcoides burtonii (strain DSM

Query: 1 IPVINVRQH 9
IPV N R+H
Sbjct: 271 IPVKNYREH 279


>sp|RS15_METS5|SMALL ribosomal subunit protein uS15|Metallosphaera sedula (strain ATCC

Query: 4 INVRQHL 10
+NVR+HL
Sbjct: 94 VNVRRHL 100


>sp|DACZ_METJA|DIADENYLATE cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPVINVRQHL 10
I V+NV++H+
Sbjct: 133 IMVVNVKEHV 142


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IPVINVRQHL 10
IPVI++ HL
Sbjct: 95 IPVIHLYPHL 104


>sp|RS15_SULAC|SMALL ribosomal subunit protein uS15|Sulfolobus acidocaldarius (strain

Query: 4 INVRQHL 10
+N+R+HL
Sbjct: 94 VNIRRHL 100




161|SequenceR|810|801|DAKALIPVIN

>sp|IF5A_NATPD|TRANSLATION initiation factor 5A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DAKALIPVIN 10
DAK +P++N
Sbjct: 62 DAKVWVPIVN 71


>sp|IF5A_HALMA|TRANSLATION initiation factor 5A|Haloarcula marismortui (strain ATCC 43049

Query: 1 DAKALIPVIN 10
DAK +P++N
Sbjct: 62 DAKVWVPIVN 71


>sp|IF5A_HALSA|TRANSLATION initiation factor 5A|Halobacterium salinarum (strain ATCC 700922

Query: 1 DAKALIPVIN 10
DAK +P++N
Sbjct: 62 DAKIWVPIVN 71


>sp|IF5A_HALS3|TRANSLATION initiation factor 5A|Halobacterium salinarum (strain ATCC 29341

Query: 1 DAKALIPVIN 10
DAK +P++N
Sbjct: 62 DAKIWVPIVN 71


>sp|SYE_PYRHO|GLUTAMATE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AKALIPVIN 10
AK +IP+IN
Sbjct: 42 AKEIIPIIN 50


>sp|IF5A_HALLT|TRANSLATION initiation factor 5A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DAKALIPVI 9
DAK +P+I
Sbjct: 62 DAKVWVPII 70


>sp|IF5A_HALWD|TRANSLATION initiation factor 5A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DAKALIPVI 9
DAK +P+I
Sbjct: 62 DAKVWVPII 70


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 4 ALIPVIN 10
AL+PV+N
Sbjct: 30 ALLPVVN 36


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DAKALIPVIN 10
+ AL+PV+N
Sbjct: 29 ETPALLPVVN 38


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DAKALIPVI 9
D KAL+P+I
Sbjct: 270 DLKALLPLI 278


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 DAKALIPVIN 10
+ AL+PV+N
Sbjct: 29 ETPALLPVVN 38


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 AKALIPVIN 10
A+ ++P+IN
Sbjct: 42 AREIVPIIN 50




162|SequenceR|815|806|PPTLTDAKAL

>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPTLTDAK 8
PPTL DA+
Sbjct: 363 PPTLLDAR 370


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 2 PTLTDAKAL 10
PTL DAK +
Sbjct: 324 PTLADAKTV 332


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPTLTDAKAL 10
PP LTD + L
Sbjct: 273 PPNLTDVRGL 282


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 PPTLTDAKAL 10
PP LTD + L
Sbjct: 273 PPNLTDVRGL 282


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPTLTDAKAL 10
P TL D KA+
Sbjct: 427 PSTLEDIKAI 436


>sp|IF6_HYPBU|TRANSLATION initiation factor 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 PPTLTD 6
PPTLT+
Sbjct: 27 PPTLTE 32


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 2 PTLTDAKAL 10
PT+ DAK L
Sbjct: 220 PTIGDAKKL 228


>sp|RL1_PYRFU|LARGE ribosomal subunit protein uL1|Pyrococcus furiosus (strain ATCC

Query: 1 PPTLTD 6
PPTLTD
Sbjct: 136 PPTLTD 141




163|SequenceR|820|811|KHDVEPPTLT

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 3 DVEPPTLT 10
D PPTLT
Sbjct: 6753 DTTPPTLT 6760


Query: 3 DVEPPTLT 10
D E PTLT
Sbjct: 795 DTEAPTLT 802


>sp|Y2332_ARCFU|UNCHARACTERIZED protein AF_2332|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KHDVEPPT 8
K DV+PPT
Sbjct: 52 KIDVQPPT 59


>sp|Y1111_HALSA|UNCHARACTERIZED GTP-binding protein VNG_1111G|Halobacterium salinarum (strain ATCC

Query: 3 DVEPPTLT 10
D EPP++T
Sbjct: 169 DAEPPSVT 176


>sp|Y352_METJA|UNCHARACTERIZED protein MJ0352|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DVEPPTL 9
+VEPPT
Sbjct: 154 EVEPPTF 160


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 1 KHDVEPP 7
KH V+PP
Sbjct: 95 KHRVDPP 101


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KHDVEPPTL 9
K +EPP L
Sbjct: 188 KRGIEPPAL 196


>sp|RL7A_METTP|LARGE ribosomal subunit protein eL8|Methanothrix thermoacetophila

Query: 2 HDVEPPTLT 10
DVEPP +
Sbjct: 55 EDVEPPEIV 63




164|SequenceR|825|816|RIKRKKHDVE

>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 4 RKKHDVE 10
R+KHDV+
Sbjct: 351 RRKHDVD 357


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IKRKKHDVE 10
I+ K+HD+E
Sbjct: 31 IEEKEHDIE 39


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 RKKHDV 9
R+KHDV
Sbjct: 325 RRKHDV 330


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 RKKHDV 9
R+KHDV
Sbjct: 325 RRKHDV 330


>sp|ILVC_NATPD|KETOL-ACID reductoisomerase (NADP(+))|Natronomonas pharaonis (strain ATCC

Query: 1 RIKRKKHDVE 10
R K HD+E
Sbjct: 307 RAAEKNHDIE 316


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 RIKRKKHDVE 10
R++ ++HD+E
Sbjct: 522 RLEERRHDME 531


>sp|PFDB_METJA|PREFOLDIN subunit beta|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKRKKHDV 9
+KRKK DV
Sbjct: 62 VKRKKEDV 69


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 RKKHDVE 10
R+KHDV+
Sbjct: 366 RRKHDVD 372


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 RKKHDV 9
R+KHDV
Sbjct: 325 RRKHDV 330


>sp|DNLI_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 RKKHDV 9
R+KHDV
Sbjct: 324 RRKHDV 329


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 2 IKRKKHDVE 10
+KR+K DVE
Sbjct: 432 LKRRKKDVE 440


>sp|SRP54_METS5|SIGNAL recognition particle 54 kDa|Metallosphaera sedula (strain ATCC

Query: 2 IKRKKHDVE 10
+KR+K DVE
Sbjct: 430 LKRRKKDVE 438


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RIKRKKHDVE 10
R+KR K +VE
Sbjct: 280 RVKRWKEEVE 289


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RIKRKKHDVE 10
R+ KK+D+E
Sbjct: 348 RLAAKKYDIE 357


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RIKRKKHDVE 10
R+ KK+D+E
Sbjct: 348 RLAAKKYDIE 357




165|SequenceR|830|821|HEIEERIKRK

>sp|TRUB_KORCO|PROBABLE tRNA pseudouridine synthase B|Korarchaeum cryptofilum (strain

Query: 1 HEIEERIKR 9
HE+ ER+KR
Sbjct: 48 HEVTERVKR 56


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 1 HEIEERIK 8
HE+EE+IK
Sbjct: 360 HELEEKIK 367


>sp|PURP_PYRAE|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrobaculum aerophilum (strain ATCC

Query: 1 HEIEERIKR 9
HEI+E +KR
Sbjct: 325 HEIKEAVKR 333


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 HEIEERIKR 9
+EI+ERIKR
Sbjct: 119 NEIKERIKR 127


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HEIEERIKR 9
HEI ERI++
Sbjct: 20 HEIAERIRK 28


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HEIEERIKRK 10
HEIEE+ ++K
Sbjct: 8 HEIEEKWQKK 17


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 3 IEERIKR 9
+EER+KR
Sbjct: 243 LEERVKR 249


>sp|SYFA_THEVO|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EIEERIKR 9
EIE+RIKR
Sbjct: 289 EIEKRIKR 296


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EIEERIKR 9
+ EERIKR
Sbjct: 510 DAEERIKR 517


>sp|RS8E_METM7|SMALL ribosomal subunit protein eS8|Methanococcus maripaludis (strain

Query: 2 EIEERIKRK 10
+I +RIKRK
Sbjct: 36 QISDRIKRK 44


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EIEERIKRK 10
E+EERIK K
Sbjct: 233 ELEERIKGK 241


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 EIEERIKR 9
EI+ERI+R
Sbjct: 388 EIDERIRR 395


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 EIEERIKRK 10
E+EER++RK
Sbjct: 93 EVEERLRRK 101


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 HEIEERIKRK 10
HEIEER K
Sbjct: 1030 HEIEERFGFK 1039


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 EIEERIKR 9
EI+ERI+R
Sbjct: 388 EIDERIRR 395


>sp|KPTA_METKA|PROBABLE RNA 2'-phosphotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 HEIEERIKR 9
HE+ ERIK+
Sbjct: 68 HELAERIKK 76


>sp|HTPX_METJA|PROTEASE HtpX homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HEIEERIKRK 10
H++ ER+ RK
Sbjct: 69 HQMVERVARK 78


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EIEERIKR 9
+ EERIKR
Sbjct: 510 DAEERIKR 517


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HEIEERIKR 9
+EI+ERI+R
Sbjct: 120 NEIKERIRR 128




166|SequenceR|835|826|IKIGFHEIEE

>sp|Y1335_ARCFU|UNCHARACTERIZED protein AF_1335|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IKIGFHEIEE 10
I++GFHE+ E
Sbjct: 62 IEMGFHELNE 71


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 2 KIGFHEIE 9
KIGFH +E
Sbjct: 243 KIGFHYVE 250


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 2 KIGFHEIE 9
KIGFH +E
Sbjct: 243 KIGFHYVE 250


>sp|RNZ_METVS|RIBONUCLEASE Z|Methanococcus vannielii (strain ATCC 35089

Query: 1 IKIGFHEIE 9
+KIG+H I+
Sbjct: 101 LKIGYHSID 109


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 2 KIGFHEIE 9
KIGFH +E
Sbjct: 243 KIGFHYVE 250


>sp|DCD_THESM|DCTP deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IKIGFHEIEE 10
++I FH +EE
Sbjct: 123 VQIAFHRLEE 132


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 2 KIGFHEIE 9
KIGFH +E
Sbjct: 243 KIGFHYVE 250


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 IKIGFHEIEE 10
I+IG HE+E+
Sbjct: 355 IEIGPHEVED 364


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 KIGFHEIEE 10
KIGF+ IE+
Sbjct: 18 KIGFNSIED 26


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IKIGFHEIE 9
IK GF+EIE
Sbjct: 56 IKEGFYEIE 64


>sp|RNZ_META3|RIBONUCLEASE Z|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IKIGFHEIE 9
+KIG+H I
Sbjct: 101 LKIGYHSIN 109


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GFHEIEE 10
GF EIEE
Sbjct: 48 GFKEIEE 54


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IKIGFH 6
IK+GFH
Sbjct: 2 IKLGFH 7


>sp|SYFB_AERPE|PHENYLALANINE--TRNA ligase beta subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 IKIGFHEI 8
I IGFH++
Sbjct: 131 IAIGFHDL 138


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IKIGFHEIEE 10
++IG HE+E+
Sbjct: 352 VEIGPHEVED 361


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IKIGFHEIEE 10
+K GF +IEE
Sbjct: 205 LKDGFEKIEE 214


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IKIGFHEIEE 10
+K GF +IEE
Sbjct: 205 LKDGFEKIEE 214




167|SequenceR|840|831|DPFQYIKIGF

>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 1 DPFQYIKIGF 10
DPF + +GF
Sbjct: 401 DPFHSVIVGF 410


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PFQYIKIG 9
PF+++KIG
Sbjct: 349 PFKFLKIG 356


>sp|RFCL_THEPD|REPLICATION factor C large subunit|Thermofilum pendens (strain DSM 2475

Query: 2 PFQYIKIGF 10
PF+++K F
Sbjct: 332 PFKFVKYSF 340


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PFQYIKI 8
PF+Y++I
Sbjct: 516 PFRYVRI 522


>sp|Y1462_ARCFU|UNCHARACTERIZED protein AF_1462|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FQYIKIGF 10
F YI +GF
Sbjct: 38 FGYISVGF 45


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 3 FQYIKIGF 10
F+Y+KIG
Sbjct: 101 FKYLKIGL 108


>sp|THIE_PICTO|THIAMINE-PHOSPHATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 2 PFQYIK 7
PF+YIK
Sbjct: 88 PFEYIK 93


>sp|PGP_STAMF|PHOSPHOGLYCOLATE phosphatase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DPFQYIKIGF 10
+ + YIK+G+
Sbjct: 140 NKYPYIKVGY 149




168|SequenceR|845|836|EDSDCDPFQY

>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DSDCDPFQY 10
D+ C+P+Q+
Sbjct: 40 DAPCEPYQF 48


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DSDCDPFQY 10
D+ C+P+Q+
Sbjct: 40 DAPCEPYQF 48


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 DSDCDPFQ 9
D DC P Q
Sbjct: 96 DGDCSPHQ 103


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 DCDPFQ 9
DCD FQ
Sbjct: 25 DCDTFQ 30


>sp|TRPE_ARCFU|ANTHRANILATE synthase component 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSDCDPFQ 9
D+D PFQ
Sbjct: 184 DTDLSPFQ 191


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 EDSDCDPFQY 10
EDSD + F+Y
Sbjct: 39 EDSDFEFFRY 48


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DCDPFQ 9
DCDP Q
Sbjct: 590 DCDPSQ 595


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EDSDCDPF 8
ED+D DPF
Sbjct: 356 EDADFDPF 363


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 EDSDCDPFQY 10
+DSD DP ++
Sbjct: 240 DDSDMDPTEW 249


>sp|Y1436_METJA|UNCHARACTERIZED protein MJ1436|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDSDCDPFQY 10
ED + PF Y
Sbjct: 27 EDDEVKPFPY 36


>sp|HIS3_ARCFU|PHOSPHORIBOSYL-AMP cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSDCDPFQY 10
D DCD Y
Sbjct: 72 DCDCDALLY 80




169|SequenceR|850|841|KFDEDEDSDC

>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDEDED 7
FDEDED
Sbjct: 371 FDEDED 376


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDEDEDSD 9
F+E+ED+D
Sbjct: 221 FEEEEDTD 228


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 4 EDEDSD 9
EDEDSD
Sbjct: 296 EDEDSD 301


>sp|CBIT_THEAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 KFDEDEDSD 9
K+D DE+ D
Sbjct: 108 KYDSDEEFD 116


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KFDEDEDSDC 10
KFD++ ++C
Sbjct: 115 KFDQNRPTNC 124


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FDEDED 7
+DEDED
Sbjct: 104 YDEDED 109




170|SequenceR|855|846|AQDQLKFDED

>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AQDQLKFDED 10
A+DQL+FD D
Sbjct: 215 AKDQLEFDMD 224


>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 3 DQLKFDED 10
D+LKFD+D
Sbjct: 35 DRLKFDDD 42


>sp|DPCKG_PICTO|GTP-DEPENDENT dephospho-CoA kinase|Picrophilus torridus (strain ATCC 700027

Query: 4 QLKFDED 10
QLKFD D
Sbjct: 2 QLKFDHD 8




171|SequenceR|860|851|ISEKLAQDQL

>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ISEKLAQDQ 9
+SE+L++DQ
Sbjct: 143 LSERLSEDQ 151


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ISEKLAQDQL 10
+SEK QDQ+
Sbjct: 275 MSEKFKQDQV 284


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 ISEKLAQDQL 10
ISE+LA DQL
Sbjct: 570 ISEELAGDQL 579


>sp|CCA_PYRAE|CCA-ADDING enzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ISEKLAQDQL 10
+SE+L +DQ+
Sbjct: 145 LSERLKKDQI 154


>sp|AMPP1_ARCFU|AMP phosphorylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EKLAQDQL 10
EKL+QD++
Sbjct: 99 EKLSQDEI 106


>sp|Y249_ARCFU|UNCHARACTERIZED protein AF_0249|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISEKLAQDQL 10
ISEKL D+L
Sbjct: 6 ISEKLKVDKL 15




172|SequenceR|865|856|IVAFPISEKL

>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 IVAFPISEKL 10
IV FPI EKL
Sbjct: 172 IVVFPIDEKL 181


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 IVAFPISEKL 10
I FPI EKL
Sbjct: 172 ITVFPIDEKL 181


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 IVAFPISEKL 10
I FPI EKL
Sbjct: 172 ITVFPIDEKL 181


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 IVAFPISEKL 10
I FPI EKL
Sbjct: 173 IAVFPIDEKL 182


>sp|MALQ_THELN|4-ALPHA-GLUCANOTRANSFERASE litoralis (strain ATCC 51850

Query: 1 IVAFPISEKL 10
I FPI EKL
Sbjct: 172 ITVFPIDEKL 181


>sp|Y79B_METJA|UNCHARACTERIZED protein MJ0795.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVAFPISE 8
IVAF ISE
Sbjct: 108 IVAFTISE 115


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VAFPISE 8
+AFPIS+
Sbjct: 45 IAFPISD 51


>sp|REG4_PYRAB|UNCHARACTERIZED HTH-type transcriptional regulator PYRAB09690|Pyrococcus abyssi

Query: 1 IVAFPISE 8
++ FPISE
Sbjct: 141 VMVFPISE 148




173|SequenceR|870|861|VTNSGIVAFP

>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTNSGIVAFP 10
+TN GI+ +P
Sbjct: 226 ITNEGIIVYP 235


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 1 VTNSGIVAFP 10
VT GI+ FP
Sbjct: 14 VTTQGIIKFP 23


>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VTNSGIVAFP 10
+ N G VAFP
Sbjct: 24 IRNGGTVAFP 33


>sp|Y432_METJA|UNCHARACTERIZED protein MJ0432|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VTNSGIVAF 9
+TN G VAF
Sbjct: 68 ITNKGRVAF 76


>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain

Query: 1 VTNSGIVA 8
+TN GI+A
Sbjct: 31 ITNKGIIA 38


>sp|IF6_METHJ|TRANSLATION initiation factor 6|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TNSGIVAFP 10
TNSG+V P
Sbjct: 149 TNSGVVVSP 157


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 2 TNSGIVAF 9
T +GIVAF
Sbjct: 147 TRNGIVAF 154




174|SequenceR|875|866|GRAEVVTNSG

>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus (strain

Query: 1 GRAEVVTN 8
GRA +VTN
Sbjct: 280 GRAAIVTN 287


>sp|RBL_PYRFU|RIBULOSE bisphosphate carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RAEVVTNSG 10
RAE+V N G
Sbjct: 232 RAELVANEG 240


>sp|RBL_PYRAB|RIBULOSE bisphosphate carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 RAEVVTNSG 10
RAE+V N G
Sbjct: 236 RAELVANEG 244


>sp|RBL_PYRHO|RIBULOSE bisphosphate carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RAEVVTNSG 10
RAE+V N G
Sbjct: 237 RAEMVANEG 245


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 RAEVVTNSG 10
RAE+V N G
Sbjct: 133 RAELVANPG 141


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 AEVVTNS 9
AE++TNS
Sbjct: 150 AEIITNS 156


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 3 AEVVTNS 9
AE++TNS
Sbjct: 150 AEIITNS 156


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 3 AEVVTNS 9
AE++TNS
Sbjct: 150 AEIITNS 156


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AEVVTNSG 10
A VVTN+G
Sbjct: 209 ARVVTNNG 216


>sp|DAPA_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GRAEVVTNSG 10
GR EV+ +G
Sbjct: 67 GRVEVIAGTG 76


>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GRAEVVTNSG 10
G EVVT+SG
Sbjct: 62 GVLEVVTDSG 71


>sp|DPM1L_HALVD|DOLICHYL-PHOSPHATE hexose transferase HVO_1613|Haloferax volcanii (strain ATCC 29605

Query: 1 GRAEVVTNSG 10
GRAEVV G
Sbjct: 35 GRAEVVCVDG 44


>sp|DNAG_HALSA|DNA primase DnaG|Halobacterium salinarum (strain ATCC 700922

Query: 1 GRAEVVT 7
GRA+VVT
Sbjct: 174 GRADVVT 180


>sp|DNAG_HALS3|DNA primase DnaG|Halobacterium salinarum (strain ATCC 29341

Query: 1 GRAEVVT 7
GRA+VVT
Sbjct: 174 GRADVVT 180


>sp|DAPA_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GRAEVVTNSG 10
GR EV+ +G
Sbjct: 67 GRVEVIAGTG 76


>sp|DAPA_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 GRAEVVTNSG 10
GR EV+ +G
Sbjct: 67 GRVEVIAGTG 76


>sp|DAPA_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 GRAEVVTNSG 10
GR EV+ +G
Sbjct: 67 GRVEVIAGTG 76




175|SequenceR|880|871|GRVRRGRAEV

>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRVRRGRAE 9
GRVR+G+ E
Sbjct: 138 GRVRKGKGE 146


>sp|CAS6B_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 RVRRGRAEV 10
RVR GR +V
Sbjct: 176 RVRNGRVDV 184


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RVRRGRAE 9
RVRRGRA+
Sbjct: 537 RVRRGRAD 544


>sp|RL7A_PICTO|LARGE ribosomal subunit protein eL8|Picrophilus torridus (strain ATCC

Query: 1 GRVRRGRAEV 10
G+VR+G EV
Sbjct: 28 GKVRKGTNEV 37


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 GRVRRGRAEV 10
G++RRGR +
Sbjct: 476 GKLRRGRGPI 485


>sp|CDC62_AERPE|ORC1-TYPE DNA replication protein 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 RVRRGRAE 9
RVRRG AE
Sbjct: 23 RVRRGEAE 30


>sp|DPOL2_METTH|DNA polymerase PolB subunit 2|Methanothermobacter thermautotrophicus

Query: 1 GRVRRGRAEV 10
GR+RRG E+
Sbjct: 102 GRIRRGDVEL 111


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GRVRRGRAEV 10
G+VRRGR +
Sbjct: 810 GKVRRGRGYI 819


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GRVRRGRAEV 10
G+VRRGR V
Sbjct: 1178 GKVRRGRNYV 1187


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 GRVRRGRAEV 10
GRVRRG+ V
Sbjct: 816 GRVRRGKNYV 825


>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GRVRRGRA 8
GR+R GRA
Sbjct: 38 GRLRPGRA 45


>sp|APGM_METS3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanobrevibacter smithii (strain ATCC

Query: 1 GRVRRGRAEV 10
GR+R G E+
Sbjct: 113 GRIREGTHEI 122


>sp|RL7A_METAR|LARGE ribosomal subunit protein eL8|Methanocella arvoryzae (strain DSM

Query: 1 GRVRRGRAEV 10
G++R+G EV
Sbjct: 30 GKIRKGTNEV 39




176|SequenceR|885|876|WPYLRGRVRR

>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PYLRGRV 8
PYL+GR+
Sbjct: 64 PYLQGRI 70


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 WPYLRGR 7
W Y++GR
Sbjct: 232 WEYMKGR 238


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 WPYLRGR 7
W YLRG+
Sbjct: 277 WAYLRGK 283


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 2 PYLRGRVR 9
P+L GRV+
Sbjct: 131 PHLEGRVK 138


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 PYLRGRVR 9
P+L GRV+
Sbjct: 131 PHLEGRVK 138


>sp|RL2_SULTO|LARGE ribosomal subunit protein uL2|Sulfurisphaera tokodaii (strain DSM

Query: 1 WPYLRG 6
WP++RG
Sbjct: 185 WPHVRG 190


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WPYLRGRVRR 10
WP L+GR ++
Sbjct: 194 WPGLKGRPQQ 203


>sp|SYP_CALMQ|PROLINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 WPYLRGRVRR 10
W +LR VRR
Sbjct: 399 WEWLRSHVRR 408




177|SequenceR|890|881|VEVIGWPYLR

>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 2 EVIGWPYL 9
E+ GWPY+
Sbjct: 191 EITGWPYI 198


>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 VIGWPYL 9
V+GWPYL
Sbjct: 218 VVGWPYL 224


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 1 VEVIGWPYLR 10
VEV+ W YLR
Sbjct: 272 VEVLKWAYLR 281


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EVIGWPYLR 10
+ WPYLR
Sbjct: 229 DAFDWPYLR 237


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VEVIGWPYL 9
VEVI PYL
Sbjct: 119 VEVIRLPYL 127


>sp|RIBL_PYRAB|FAD synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VEVIGWPYL 9
VEVI PYL
Sbjct: 119 VEVIRLPYL 127


>sp|THIL_PYRAB|THIAMINE-MONOPHOSPHATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VEVIGWPYL 9
+EV+GW +L
Sbjct: 294 LEVLGWEHL 302


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 2 EVIGWPY 8
E++G+PY
Sbjct: 457 EILGYPY 463


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 2 EVIGWPY 8
E++G+PY
Sbjct: 457 EILGYPY 463


>sp|Y613_ARCFU|UNCHARACTERIZED protein AF_0613|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VEVIGWPYLR 10
V +GW Y+R
Sbjct: 96 VARMGWKYVR 105


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 2 EVIGWPY 8
E++G+PY
Sbjct: 459 EILGYPY 465


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 2 EVIGWPY 8
E++G+PY
Sbjct: 459 EILGYPY 465


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EVIGWPY 8
EVIGW +
Sbjct: 16 EVIGWAH 22


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VEVIGWPYL 9
V IG+PY+
Sbjct: 59 VSAIGYPYI 67


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 2 EVIGWPYLR 10
E++G+P +R
Sbjct: 17 EIVGYPAVR 25


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 EVIGWPY 8
E+IGW Y
Sbjct: 284 ELIGWEY 290


>sp|YAC1_METSH|UNCHARACTERIZED 16.9 kDa protein in|Methanothrix soehngenii (Methanosaeta concilii)

Query: 4 IGWPYLR 10
I WPY+R
Sbjct: 138 IRWPYIR 144




178|SequenceR|895|886|HGPNEVEVIG

>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 HGPNEVEV 8
HGP+E+EV
Sbjct: 141 HGPSELEV 148


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGPNEVEV 8
HGP+E+EV
Sbjct: 141 HGPSELEV 148


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HGPNEVEVIG 10
+GPNE +IG
Sbjct: 220 NGPNEFTIIG 229


>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HGPNEVEV 8
H PNEVE+
Sbjct: 79 HDPNEVEI 86


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HGPNEVEV 8
HGP E+EV
Sbjct: 141 HGPTELEV 148


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 2 GPNEVEVIG 10
GP EVE++G
Sbjct: 111 GPVEVEIVG 119


>sp|RL1_METB6|LARGE ribosomal subunit protein uL1|Methanoregula boonei (strain DSM

Query: 2 GPNEVEVIG 10
GP+EVE +G
Sbjct: 83 GPDEVERLG 91


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPNEVE 7
GPNEVE
Sbjct: 356 GPNEVE 361


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPNEVE 7
GPNEVE
Sbjct: 356 GPNEVE 361


>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 HGPNEVEVIG 10
HGP +E++
Sbjct: 199 HGPEVIEIVA 208


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 3 PNEVEVIG 10
P EV VIG
Sbjct: 38 PTEVHVIG 45


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HGPNEVEVIG 10
H P E+E +G
Sbjct: 398 HNPAEIEALG 407


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GPNEVE 7
GPNEVE
Sbjct: 353 GPNEVE 358


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HGPNEVE 7
HGP E+E
Sbjct: 141 HGPTELE 147


>sp|CBIA_METM7|COBYRINATE a,c-diamide synthase|Methanococcus maripaludis (strain C7 /

Query: 4 NEVEVIG 10
NE+E+IG
Sbjct: 169 NEIEIIG 175


>sp|NDK_IGNH4|NUCLEOSIDE diphosphate kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GPNEVEVI 9
GPN VEV+
Sbjct: 77 GPNAVEVM 84


>sp|RS2_NANEQ|SMALL ribosomal subunit protein uS2|Nanoarchaeum equitans (strain

Query: 3 PNEVEVIG 10
PNE+ V+G
Sbjct: 62 PNEILVVG 69


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 2 GPNEVEVI 9
GP EVEV+
Sbjct: 110 GPTEVEVL 117


>sp|RL1_METLZ|LARGE ribosomal subunit protein uL1|Methanocorpusculum labreanum

Query: 2 GPNEVEVIG 10
GP+E+E +G
Sbjct: 82 GPDEIERLG 90


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 PNEVEVI 9
PNE+E++
Sbjct: 140 PNEIEIL 146


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 60 HNTDQVEVVG 69


>sp|PGP_SULAC|PHOSPHOGLYCOLATE phosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HGPNEVEVIG 10
HG ++ EV+G
Sbjct: 161 HGLDKAEVVG 170


>sp|PHNC2_HALWD|PHOSPHONATES import ATP-binding protein PhnC|Haloquadratum walsbyi (strain DSM

Query: 2 GPNEVEVIG 10
G +EV+VIG
Sbjct: 268 GTDEVDVIG 276


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 60 HNTDQVEVVG 69


>sp|RL1_METHJ|LARGE ribosomal subunit protein uL1|Methanospirillum hungatei JF-1

Query: 2 GPNEVEVIG 10
GP E+E +G
Sbjct: 83 GPEEIERLG 91


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 64 HNTDQVEVVG 73


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HGPNEVEVIG 10
H P+ +E+IG
Sbjct: 282 HAPDVLELIG 291


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 60 HNTDQVEVVG 69


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 63 HNTDQVEVVG 72


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 60 HNTDQVEVVG 69


>sp|METK_THEKO|S-ADENOSYLMETHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 63 HNTDQVEVVG 72


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 60 HNTDQVEVVG 69


>sp|METK_THEGJ|S-ADENOSYLMETHIONINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 HGPNEVEVIG 10
H ++VEV+G
Sbjct: 63 HNTDQVEVVG 72




179|SequenceR|900|891|KVFDCHGPNE

>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 DCHGPN 9
D HGPN
Sbjct: 68 DIHGPN 73


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DCHGPN 9
D HGPN
Sbjct: 68 DIHGPN 73


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 4 DCHGPN 9
D HGPN
Sbjct: 68 DIHGPN 73


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM

Query: 4 DCHGPN 9
D HGPN
Sbjct: 78 DIHGPN 83


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 4 DCHGPN 9
D HGPN
Sbjct: 77 DIHGPN 82


>sp|Y504_ARCFU|UPF0282 protein AF_0504|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FDCHGPNE 10
+D H PNE
Sbjct: 76 YDHHDPNE 83


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 KVFDCHGPN 9
K+ CHG N
Sbjct: 598 KILLCHGDN 606


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 81 WDCHGLPTE 89


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 84 WDCHGLPTE 92


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 80 WDCHGLPTE 88


>sp|MTRC_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter marburgensis

Query: 5 CHGPNE 10
C GPNE
Sbjct: 190 CLGPNE 195


>sp|MTRC_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter

Query: 5 CHGPNE 10
C GPNE
Sbjct: 190 CLGPNE 195


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii (strain

Query: 5 CHGPNE 10
C GPNE
Sbjct: 194 CLGPNE 199


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 84 WDCHGLPTE 92


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 84 WDCHGLPTE 92


>sp|Y1281_ARCFU|UNCHARACTERIZED protein AF_1281|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 CHGP 8
CHGP
Sbjct: 100 CHGP 103


>sp|DEGLY_THEKO|DEGLYCASE TK1284|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 CHGP 8
CHGP
Sbjct: 100 CHGP 103


>sp|DEGLY_PYRHO|DEGLYCASE PH1704|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 CHGP 8
CHGP
Sbjct: 100 CHGP 103


>sp|DEGLY_PYRAB|DEGLYCASE PYRAB04690|Pyrococcus abyssi (strain GE5 /

Query: 5 CHGP 8
CHGP
Sbjct: 100 CHGP 103


>sp|DEGLY_PYRFU|DEGLYCASE PfpI|Pyrococcus furiosus (strain ATCC 43587

Query: 5 CHGP 8
CHGP
Sbjct: 100 CHGP 103


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC

Query: 5 CHGP 8
CHGP
Sbjct: 7 CHGP 10


>sp|Y875_PYRAB|UPF0310 protein PYRAB08750|Pyrococcus abyssi (strain GE5 /

Query: 1 KVFDCHGPNE 10
K+F H P E
Sbjct: 75 KIFKSHTPGE 84


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 5 CHGPNE 10
C GPNE
Sbjct: 199 CIGPNE 204


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VFDCHGP 8
VFD H P
Sbjct: 120 VFDIHNP 126


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 2 VFDCHGP 8
VFD H P
Sbjct: 120 VFDIHNP 126


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVFDCHGPNE 10
KV C+ P E
Sbjct: 249 KVIPCYSPEE 258


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 80 WDCHGLPTE 88


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 80 WDCHGLPTE 88


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FDCHG 7
+DCHG
Sbjct: 89 WDCHG 93


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 5 CHGP 8
CHGP
Sbjct: 7 CHGP 10


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 CHGPN 9
CH PN
Sbjct: 348 CHAPN 352


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 FDCHG 7
+DCHG
Sbjct: 90 WDCHG 94


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 83 WDCHGLPTE 91


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FDCHG 7
+DCHG
Sbjct: 89 WDCHG 93


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 82 WDCHGLPTE 90


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 82 WDCHGLPTE 90


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 84 WDCHGLPTE 92


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DCHGPN 9
+C GPN
Sbjct: 471 ECRGPN 476


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 FDCHG 7
+DCHG
Sbjct: 85 WDCHG 89


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 5 CHGP 8
CHGP
Sbjct: 132 CHGP 135


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 2 VFDCHGPNE 10
V+DC G E
Sbjct: 332 VYDCGGQEE 340


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 FDCHG-PNE 10
+DCHG P E
Sbjct: 82 WDCHGLPTE 90




180|SequenceR|905|896|LMTRLKVFDC

>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LMTRLKVFDC 10
L+ RLK DC
Sbjct: 278 LVDRLKGLDC 287


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 LMTRLKVFD 9
+MT ++VFD
Sbjct: 4 VMTTIRVFD 12




181|SequenceR|910|901|MHTRVLMTRL

***** No hits found ******


182|SequenceR|915|906|DKLDQMHTRV

>sp|METXA_METFP|HOMOSERINE O-acetyltransferase|Methanobacterium formicicum (strain DSM 3637

Query: 1 DKLDQMHTR 9
DKLDQ+ TR
Sbjct: 432 DKLDQIMTR 440


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DKLDQMH 7
DK DQMH
Sbjct: 223 DKFDQMH 229


>sp|GVPH1_HALSA|GAS vesicle protein H1|Halobacterium salinarum (strain ATCC 700922

Query: 3 LDQMHTRV 10
LDQ+HT V
Sbjct: 21 LDQLHTLV 28


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DKLDQMHTRV 10
D+L+++HT V
Sbjct: 79 DELEKLHTAV 88


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DKLDQMHTRV 10
D+L+++HT V
Sbjct: 79 DELEKLHTAV 88




183|SequenceR|920|911|TERTVDKLDQ

>sp|HMAT_HALSA|HEME-BASED aerotactic transducer HemAT|Halobacterium salinarum (strain ATCC

Query: 1 TERTVDKLDQ 10
TE TVD+LD+
Sbjct: 387 TEETVDQLDE 396


>sp|RL15_METKA|LARGE ribosomal subunit protein uL15|Methanopyrus kandleri (strain AV19 /

Query: 1 TERTVDKLDQ 10
TER V+KL++
Sbjct: 137 TERAVEKLEE 146


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RTVDKLDQ 10
R +DKLD+
Sbjct: 187 RAIDKLDK 194




184|SequenceR|925|916|YNEYHTERTV

>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NEYHTER 8
+EYHTER
Sbjct: 191 DEYHTER 197


>sp|DTDA_NATPD|D-AMINOACYL-TRNA deacylase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EYHTERTV 10
E HTERTV
Sbjct: 181 EPHTERTV 188


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 NEYHTERTV 10
N+YH ER V
Sbjct: 198 NKYHFERMV 206


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 2 NEYHTE 7
NEYH E
Sbjct: 386 NEYHKE 391


>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi (strain

Query: 2 NEYHTER 8
+EYHT++
Sbjct: 120 DEYHTDK 126


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 NEYHTE 7
NEYH E
Sbjct: 1062 NEYHKE 1067


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 NEYHTE 7
NEYH E
Sbjct: 1062 NEYHKE 1067


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain Fusaro

Query: 2 NEYHTE 7
NEYH E
Sbjct: 1063 NEYHKE 1068


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 3 EYHTE 7
EYHTE
Sbjct: 174 EYHTE 178


>sp|CBPX1_SACS2|THERMOSTABLE carboxypeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YNEYHTERTV 10
Y EY+T + V
Sbjct: 33 YKEYNTSKLV 42


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7 /

Query: 4 YHTER 8
YHTER
Sbjct: 256 YHTER 260




185|SequenceR|930|921|ICQARYNEYH

>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 ICQARYNE 8
+C ARY+E
Sbjct: 294 VCMARYDE 301


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ICQARYNEY 9
ICQ+ N+Y
Sbjct: 16 ICQSARNDY 24


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 ARYNEY 9
ARYN+Y
Sbjct: 178 ARYNQY 183


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 QARYNEYH 10
Q +YNE H
Sbjct: 572 QIKYNEKH 579


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ICQARYNEY 9
IC+A N+Y
Sbjct: 16 ICKAARNDY 24


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 3 QARYNEYH 10
+ +YNEY+
Sbjct: 369 EGKYNEYN 376


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QARYNEYH 10
+ +YNEY+
Sbjct: 371 EGKYNEYN 378


>sp|GPMI_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ICQARYNE 8
+C A+Y+E
Sbjct: 300 VCMAQYDE 307


>sp|GPMI2_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 ICQARYNE 8
+C A+Y+E
Sbjct: 300 VCMAQYDE 307


>sp|GPMI1_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 ICQARYNE 8
+C A+Y+E
Sbjct: 297 VCMAQYDE 304




186|SequenceR|935|926|RTMSQICQAR

>sp|PYRB_METVS|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus vannielii

Query: 1 RTMSQICQA 9
RT+ +CQA
Sbjct: 164 RTVHSLCQA 172


>sp|PYRB_METMP|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 RTMSQICQA 9
RT+ +CQA
Sbjct: 164 RTVHSLCQA 172


>sp|PYRB_METM7|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 RTMSQICQA 9
RT+ +CQA
Sbjct: 164 RTVHSLCQA 172


>sp|PYRB_METM6|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 RTMSQICQA 9
RT+ +CQA
Sbjct: 164 RTVHSLCQA 172


>sp|PYRB_METM5|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus maripaludis

Query: 1 RTMSQICQA 9
RT+ +CQA
Sbjct: 164 RTVHSLCQA 172


>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 2 TMSQICQAR 10
T ++IC+AR
Sbjct: 54 TAARICEAR 62


>sp|MTNA_METAC|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosarcina acetivorans

Query: 1 RTMSQICQA 9
+T+S +C+A
Sbjct: 40 KTLSSLCEA 48




187|SequenceR|940|931|EKVVLRTMSQ

>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 1 EKVVLRTM 8
E+VVLRTM
Sbjct: 407 EEVVLRTM 414




188|SequenceR|945|936|KNRNREKVVL

***** No hits found ******


189|SequenceR|950|941|SERTLKNRNR

***** No hits found ******


190|SequenceR|955|946|PFDTGSERTL

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 PFDTGSE 7
PFD GSE
Sbjct: 115 PFDMGSE 121


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PFDTGSE 7
PFD GSE
Sbjct: 19 PFDAGSE 25


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PFDTGSERTL 10
PF GS+R +
Sbjct: 95 PFGVGSQRAM 104


>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PFDTGSERTL 10
P D G+ERTL
Sbjct: 143 PDDRGTERTL 152


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PFDTGSERTL 10
P DT +ER L
Sbjct: 490 PLDTDAERDL 499


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PFDTGSERT 9
PFD ERT
Sbjct: 213 PFDVDRERT 221


>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 2 FDTGSERTL 10
FDT ERTL
Sbjct: 106 FDTSLERTL 114


>sp|ARLY_NATPD|ARGININOSUCCINATE lyase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PFDTGSERT 9
PFD ERT
Sbjct: 205 PFDIDRERT 213


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 1 PFDTGSERTL 10
PFD RTL
Sbjct: 359 PFDVNIRRTL 368


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 4 TGSERTL 10
TGS+RTL
Sbjct: 91 TGSKRTL 97


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain

Query: 2 FDTGSERTL 10
F+TG ER L
Sbjct: 61 FETGEERLL 69


>sp|FAU1_PYRAR|PROBABLE ribonuclease FAU-1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FDTGSERTL 10
FD G ER L
Sbjct: 397 FDGGGERVL 405


>sp|YPZ5_METTF|UNCHARACTERIZED protein ORF5'|Methanothermobacter thermautotrophicus

Query: 2 FDTGSERTL 10
DTG E TL
Sbjct: 212 LDTGEEATL 220




191|SequenceR|960|951|PVAPIPFDTG

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PIPFDTG 10
P+PFD G
Sbjct: 279 PVPFDLG 285


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 2 VAPIPFDTG 10
VAP P DTG
Sbjct: 284 VAPRPHDTG 292


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PIPFDTG 10
P+PFD G
Sbjct: 282 PVPFDLG 288


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VAPIPFDTG 10
V+P+PF TG
Sbjct: 570 VSPVPFVTG 578


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 2 VAPIPFDTG 10
VAP P DTG
Sbjct: 286 VAPRPHDTG 294


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 4 PIPFDTG 10
P+PFD G
Sbjct: 279 PVPFDLG 285


>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 279 VSPRPHDTG 287


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 3 APIPFDTG 10
AP+PF+ G
Sbjct: 226 APVPFNDG 233


>sp|TRUA_METMJ|TRNA pseudouridine synthase A|Methanoculleus marisnigri (strain ATCC

Query: 1 PVAPIPFDTG 10
P P+P D G
Sbjct: 227 PFTPLPIDAG 236


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 278 VSPRPHDTG 286


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 278 VSPRPHDTG 286


>sp|PURT_METMP|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 278 VSPRPHDTG 286


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 278 VSPRPHDTG 286


>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera tokodaii

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 285 VSPRPHDTG 293


>sp|Y1029_THESM|UPF0282 protein TSIB_1029|Thermococcus sibiricus (strain DSM 12597

Query: 3 APIPFDTG 10
A +PFD G
Sbjct: 294 AEVPFDVG 301


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 281 VSPRPHDTG 289


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 APIPFDTG 10
AP+PF G
Sbjct: 226 APVPFTNG 233


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 289 VSPRPHDTG 297


>sp|RL2_HALWD|LARGE ribosomal subunit protein uL2|Haloquadratum walsbyi (strain DSM

Query: 1 PVAPIPFDTG 10
PVA + FD G
Sbjct: 55 PVAAVEFDDG 64


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 3 APIPFDTG 10
AP+PF G
Sbjct: 226 APVPFKEG 233


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 289 VSPRPHDTG 297


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 289 VSPRPHDTG 297


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 288 VSPRPHDTG 296


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 2 VAPIPFDTG 10
V+P P DTG
Sbjct: 289 VSPRPHDTG 297


>sp|RL2_METS5|LARGE ribosomal subunit protein uL2|Metallosphaera sedula (strain ATCC

Query: 1 PVAPIPFDTG 10
PVA + DTG
Sbjct: 53 PVAKVKLDTG 62


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 PVAPIPFDTG 10
P+A +P DT
Sbjct: 74 PMAGVPIDTA 83


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 PVAPIPFDTG 10
P+A +P DT
Sbjct: 74 PMAGVPIDTA 83


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain

Query: 1 PVAPIPFDTG 10
P+A + F+TG
Sbjct: 55 PIAKVVFETG 64


>sp|RS11_PYRIL|SMALL ribosomal subunit protein uS11|Pyrobaculum islandicum (strain DSM

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 120 VTPIPHDT 127


>sp|RS11_PYRCJ|SMALL ribosomal subunit protein uS11|Pyrobaculum calidifontis (strain DSM

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 122 VTPIPHDT 129


>sp|RS11_METS5|SMALL ribosomal subunit protein uS11|Metallosphaera sedula (strain ATCC

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 113 VTPIPHDT 120


>sp|RS11_CENSY|SMALL ribosomal subunit protein uS11|Cenarchaeum symbiosum (strain A)

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 179 VTPIPHDT 186


>sp|RS11_CALMQ|SMALL ribosomal subunit protein uS11|Caldivirga maquilingensis (strain

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 113 VTPIPHDT 120


>sp|RS11_AERPE|SMALL ribosomal subunit protein uS11|Aeropyrum pernix (strain ATCC 700893

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 114 VTPIPHDT 121


>sp|RS11_STAMF|SMALL ribosomal subunit protein uS11|Staphylothermus marinus (strain ATCC

Query: 2 VAPIPFDT 9
V PIP DT
Sbjct: 114 VTPIPHDT 121


>sp|RL2_METST|LARGE ribosomal subunit protein uL2|Methanosphaera stadtmanae (strain

Query: 1 PVAPIPFDTG 10
PVA + FD G
Sbjct: 58 PVAVVKFDNG 67




192|SequenceR|965|956|PDTGPPVAPI

>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PDTGPPVAP 9
PDTG P+ P
Sbjct: 146 PDTGEPLYP 154


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PDTGPPV 7
PDT PPV
Sbjct: 422 PDTWPPV 428


>sp|TFE_HALWD|TRANSCRIPTION factor E|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDTGPPVAPI 10
P+TG P+ PI
Sbjct: 139 PETGAPLEPI 148


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 PDTGPPV 7
PDT PPV
Sbjct: 417 PDTWPPV 423


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDTGPPV 7
PDT PPV
Sbjct: 417 PDTWPPV 423


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 2 DTGPPVAP 9
+TGP +AP
Sbjct: 327 ETGPQIAP 334


>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDTGPPVAP 9
P TG P AP
Sbjct: 109 PSTGIPTAP 117


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 4 GPPVAPI 10
GPP AP+
Sbjct: 112 GPPEAPV 118


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 PDTGPP 6
PDTG P
Sbjct: 111 PDTGKP 116


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DTGPPVAPI 10
D GPP P+
Sbjct: 272 DMGPPREPL 280


>sp|RL10_SACS2|LARGE ribosomal subunit protein uL10|Saccharolobus solfataricus (strain

Query: 2 DTGPPVAPI 10
DTG P PI
Sbjct: 131 DTGMPAGPI 139


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DTGPPVAPI 10
D GPP P+
Sbjct: 272 DMGPPREPL 280




193|SequenceR|970|961|LKETEPDTGP

>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LKETEPDTGP 10
L+E +PD GP
Sbjct: 143 LREGKPDAGP 152


>sp|DAPB_METJA|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKETEPD 7
LKET+PD
Sbjct: 68 LKETKPD 74


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 LKETEPDTGP 10
++E +PD GP
Sbjct: 143 MREGKPDVGP 152


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKETEPDTGP 10
L T PD GP
Sbjct: 749 LHHTTPDVGP 758


>sp|RISC_AERPE|RIBOFLAVIN synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LKETEPDTGP 10
L++ PD GP
Sbjct: 144 LRQGYPDAGP 153


>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LKETEPD 7
L ETEPD
Sbjct: 68 LAETEPD 74


>sp|AMTAB_ARCFU|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Archaeoglobus

Query: 1 LKETEPD 7
+KET PD
Sbjct: 310 IKETRPD 316


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 LKETEPD 7
+KE EPD
Sbjct: 212 IKENEPD 218


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 LKETEPDT 8
+KET PDT
Sbjct: 1061 IKETFPDT 1068


>sp|DAPB_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LKETEPD 7
+KET PD
Sbjct: 69 IKETRPD 75




194|SequenceR|975|966|DKERILKETE

>sp|IF2P_THEAC|PROBABLE translation initiation factor IF-2|Thermoplasma acidophilum

Query: 1 DKERILKETE 10
D RILKETE
Sbjct: 59 DISRILKETE 68


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 DKERILKE 8
DKER +KE
Sbjct: 503 DKERFMKE 510


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKERILKETE 10
D+E+I+KE E
Sbjct: 200 DEEQIIKEAE 209


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKERILKETE 10
DKER+L+E +
Sbjct: 583 DKERVLQEQD 592


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KERILKET 9
K RILKET
Sbjct: 1362 KNRILKET 1369


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DKERILKETE 10
D E +LK+TE
Sbjct: 248 DLEMLLKQTE 257


>sp|DPCKG_NITMS|GTP-DEPENDENT dephospho-CoA kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DKERILKETE 10
DKE ILK E
Sbjct: 15 DKENILKHLE 24


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKERILKETE 10
D E+IL+E E
Sbjct: 209 DYEKILREAE 218




195|SequenceR|980|971|RRLEEDKERI

>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RRLEEDKERI 10
RR++E+K RI
Sbjct: 416 RRIKENKIRI 425


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 1 RRLEEDKERI 10
+RL+E++E+I
Sbjct: 109 KRLQEEQEKI 118


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RLEEDKER 9
RLE DKER
Sbjct: 124 RLEPDKER 131


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRLEEDKERI 10
R LEED E+I
Sbjct: 150 RSLEEDIEKI 159


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RRLEEDKERI 10
+R++ED ERI
Sbjct: 94 KRIDEDDERI 103


>sp|BIOW_METJA|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLEEDKER 9
RLE DKER
Sbjct: 125 RLEPDKER 132


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RRLEEDKERI 10
RRL+E+KE++
Sbjct: 413 RRLQEEKEKL 422


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 RRLEEDKERI 10
RRLEE ER+
Sbjct: 1169 RRLEEALERV 1178


>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 RRLEEDKERI 10
R+++ED+ER+
Sbjct: 751 RKVDEDRERV 760


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 2 RLEEDKER 9
RLE DKER
Sbjct: 121 RLEPDKER 128


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RLEEDKERI 10
+LEED +RI
Sbjct: 533 KLEEDMDRI 541




196|SequenceR|985|976|LMEQMRRLEE

>sp|AGLJ_HALVD|GLYCOSYLTRANSFERASE AglJ|Haloferax volcanii (strain ATCC 29605

Query: 3 EQMRRLEE 10
EQM+R+EE
Sbjct: 294 EQMKRIEE 301


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LMEQMRRLEE 10
L+E M+RL E
Sbjct: 183 LLEVMKRLSE 192


>sp|HIS4_PYRAE|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrobaculum aerophilum (strain

Query: 1 LMEQMRRLEE 10
+ E +RRLEE
Sbjct: 142 IAEAVRRLEE 151


>sp|TRPF1_METMA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LMEQMRRLEE 10
L++++RRLEE
Sbjct: 131 LLDEVRRLEE 140


>sp|COMB_METTH|2-PHOSPHOSULFOLACTATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LMEQMRRL 8
LME++RRL
Sbjct: 218 LMEEIRRL 225


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LMEQMRRLEE 10
L+E M+RL E
Sbjct: 539 LLELMKRLRE 548




197|SequenceR|990|981|KQIKHLMEQM

>sp|NAC_PYRFU|NASCENT polypeptide-associated complex protein|Pyrococcus furiosus

Query: 1 KQIKHLMEQM 10
KQ+K LM+Q+
Sbjct: 7 KQLKKLMKQL 16




198|SequenceR|996|986|YNEKMQKQIKH

>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YNEKMQKQIKH 11
YNE++QK +KH
Sbjct: 275 YNEELQKSVKH 285


>sp|CAS1B_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNEKMQKQIKH 11
+NE+++K +KH
Sbjct: 275 FNERLEKTVKH 285


>sp|CAS1A_METRM|CRISPR-ASSOCIATED protein Cas1 1|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 YNEKMQKQIKH 11
YN++++ IKH
Sbjct: 275 YNKRLETTIKH 285


>sp|PURE_METJA|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YNEKMQKQI 9
Y EKM+K++
Sbjct: 137 YREKMKKKV 145


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YNEKMQKQIKH 11
YNE++ + +KH
Sbjct: 279 YNEELGRSVKH 289


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EKMQKQIK 10
EKM++QIK
Sbjct: 120 EKMRRQIK 127


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YNEKMQKQI 9
YN+K QK++
Sbjct: 120 YNKKNQKRV 128


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 2 NEKMQKQI 9
NE++QKQ+
Sbjct: 75 NEEIQKQL 82




THE END