1|SequenceR|10|1|AVLLLLLLRM
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 AVLLLLLLR 9
++LLLL+R
Sbjct: 265 GIILLLLIR 273
2|SequenceR|15|6|VMASAAVLLL
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 VMASAAVLL 9
VMASA +LL
Sbjct: 446 VMASAFILL 454
3|SequenceR|20|11|SAESRVMASA
***** No hits found ******
4|SequenceR|25|16|GGLNASAESR
***** No hits found ******
5|SequenceR|30|21|RKSPVGGLNA
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 RKSPVGG 7
RKSP+GG
Sbjct: 175 RKSPLGG 181
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 SPVGGLN 9
+P+GG+N
Sbjct: 935 APIGGMN 941
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 SPVGGLN 9
+P+GG+N
Sbjct: 935 APIGGMN 941
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 SPVGGLN 9
+P+GG+N
Sbjct: 935 APIGGMN 941
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 SPVGGLN 9
+P+GG N
Sbjct: 994 APIGGFN 1000
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 SPVGGLN 9
+P+GG N
Sbjct: 994 APIGGFN 1000
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 RKSPVGG 7
RKSP+G
Sbjct: 70 RKSPLGA 76
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 RKSPVGG 7
RKSP+G
Sbjct: 70 RKSPLGA 76
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen)
Query: 1 RKSPVGG 7
RKSP+G
Sbjct: 70 RKSPLGA 76
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 2 KSPVGGL 8
+SPVGG+
Sbjct: 118 RSPVGGV 124
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 3 SPVGGLNA 10
SP+ G+NA
Sbjct: 153 SPLDGINA 160
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 RKSPVGGLNA 10
R+ P+G +NA
Sbjct: 443 RRPPLGPINA 452
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KSPVGGL 8
K+P+GG+
Sbjct: 196 KNPIGGV 202
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 KSPVGGL 8
K+P+GG+
Sbjct: 196 KNPIGGV 202
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 KSPVGGL 8
K+P+GG+
Sbjct: 196 KNPIGGV 202
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KSPVGGL 8
K+P+GG+
Sbjct: 196 KNPIGGV 202
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KSPVGGL 8
K+P+GG+
Sbjct: 196 KNPIGGV 202
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 2 KSPVGGL 8
K+P+GG+
Sbjct: 196 KNPIGGV 202
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 4 PVGGL 8
PVGGL
Sbjct: 783 PVGGL 787
>sp|SHDAG_HDVWO|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 4 PVGGLN 9
PVGG+N
Sbjct: 148 PVGGVN 153
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PVGGLN 9
P+GGLN
Sbjct: 547 PLGGLN 552
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 1 RKSPVGGLNA 10
R SP GL+A
Sbjct: 219 RSSPARGLSA 228
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PVGGLN 9
P+GGLN
Sbjct: 547 PLGGLN 552
>sp|LHDAG_HDVWO|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 4 PVGGLN 9
PVGG+N
Sbjct: 148 PVGGVN 153
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PVGGLN 9
P+GGLN
Sbjct: 547 PLGGLN 552
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 RKSPVGGLN 9
+K P GLN
Sbjct: 438 KKDPYDGLN 446
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 RKSPVGGLN 9
+K P GLN
Sbjct: 438 KKDPYDGLN 446
6|SequenceR|35|26|YQMKLRKSPV
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YQMKLRKSPV 10
+Q+KL+ +PV
Sbjct: 7025 FQLKLKGTPV 7034
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 QMKLRKSPV 10
+MK +KSP+
Sbjct: 80 EMKGKKSPI 88
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YQMKLRKSPV 10
Y +KL+ SP+
Sbjct: 809 YVLKLKTSPM 818
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YQMKLRKSPV 10
Y +KL+ SP+
Sbjct: 809 YVLKLKTSPM 818
7|SequenceR|40|31|LPGTAYQMKL
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 LPGTAY 6
PGTAY
Sbjct: 649 FPGTAY 654
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 1 LPGTAYQ 7
LP T YQ
Sbjct: 252 LPSTVYQ 258
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 LPGTAYQM 8
L GT+Y+M
Sbjct: 577 LKGTSYKM 584
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 103 PGKCYQFAL 111
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGKCYQFAL 134
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 LPGTAYQMKL 10
L GTA Q+K+
Sbjct: 52 LVGTALQVKM 61
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LPGTAYQMKL 10
L GTA Q+K+
Sbjct: 52 LIGTALQVKM 61
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LPGTAYQMKL 10
L GTA Q+K+
Sbjct: 52 LIGTALQVKM 61
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LPGTAYQMKL 10
L GTA Q+K+
Sbjct: 52 LIGTALQVKM 61
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PGTAYQ 7
PGT YQ
Sbjct: 727 PGTRYQ 732
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 PGTAYQMKL 10
PG YQ L
Sbjct: 126 PGRCYQFAL 134
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LPGTAYQMKL 10
L GTA Q+K+
Sbjct: 52 LIGTALQVKM 61
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 LPGTAYQ 7
PG AYQ
Sbjct: 1122 FPGDAYQ 1128
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 LPGTAYQMKL 10
L GTA Q+K+
Sbjct: 52 LIGTAIQVKM 61
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 4 TAYQMKL 10
T YQ+KL
Sbjct: 345 TKYQLKL 351
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LPGTAY 6
+PGTA+
Sbjct: 4359 IPGTAF 4364
8|SequenceR|45|36|IQFKLLPGTA
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 IQFKLLPGT 9
+ FKL+P T
Sbjct: 585 LPFKLIPST 593
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 IQFKLLPGT 9
+ FKL+P T
Sbjct: 585 LPFKLIPST 593
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 IQFKLLPGT 9
+ FKL+P T
Sbjct: 585 LPFKLIPST 593
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 IQFKLLPGTA 10
I+F+ PGT+
Sbjct: 1068 IKFEECPGTS 1077
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 4 KLLPGTA 10
KLLP TA
Sbjct: 245 KLLPDTA 251
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 3 FKLLPGT 9
FK PGT
Sbjct: 93 FKFRPGT 99
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 IQFKLLPGT 9
I+F+ PGT
Sbjct: 1061 IRFESCPGT 1069
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 IQFKLLPG 8
+QFK PG
Sbjct: 1309 VQFKRPPG 1316
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 IQFKLLPG 8
+QFK PG
Sbjct: 1309 VQFKRPPG 1316
>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United
Query: 2 QFKLLPG 8
+FKL PG
Sbjct: 487 EFKLYPG 493
9|SequenceR|50|41|GUSVCIQFKL
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 5 CIQFK 9
CIQFK
Sbjct: 649 CIQFK 653
10|SequenceR|55|46|FVRRYGUSVC
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 FVRRYG 6
F+RRYG
Sbjct: 2736 FIRRYG 2741
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 FVRRYG 6
F+RRYG
Sbjct: 2648 FIRRYG 2653
11|SequenceR|60|51|RMYEEFVRRY
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 RMYEEFVRR 9
R YEEF+R+
Sbjct: 2159 REYEEFIRK 2167
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2161 YEEFIRK 2167
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2163 YEEFIRK 2169
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2164 YEEFIRK 2170
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2152 YEEFIRK 2158
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2152 YEEFIRK 2158
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2153 YEEFIRK 2159
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2153 YEEFIRK 2159
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2155 YEEFIRK 2161
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2150 YEEFIRK 2156
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 YEEFVRR 9
YEEF+R+
Sbjct: 2169 YEEFIRK 2175
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 YEEFVRRY 10
++EFVRR+
Sbjct: 1870 FDEFVRRH 1877
Query: 5 EFVRRY 10
EFV RY
Sbjct: 630 EFVNRY 635
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 EEFVRRY 10
E+F+RRY
Sbjct: 2646 EDFIRRY 2652
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 EEFVRRY 10
E+F+RRY
Sbjct: 2734 EDFIRRY 2740
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 1 RMYEEFVRR 9
R Y EF +R
Sbjct: 472 RFYNEFAKR 480
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 YEEFVRR 9
YEEF+++
Sbjct: 2153 YEEFIKK 2159
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EEFVRRY 10
+EF++RY
Sbjct: 6648 DEFIQRY 6654
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 3 YEEFVRR 9
YEE+V+R
Sbjct: 57 YEEYVQR 63
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RMYEEFVRRY 10
R+Y+ F+R +
Sbjct: 101 RLYQRFLREW 110
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 EEFVRRY 10
+EF+RR+
Sbjct: 1848 DEFIRRH 1854
Query: 5 EFVRRY 10
EFV RY
Sbjct: 630 EFVNRY 635
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 EEFVRR 9
EEFVR+
Sbjct: 2906 EEFVRK 2911
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 EEFVRRY 10
+EF+RR+
Sbjct: 1851 DEFIRRH 1857
Query: 5 EFVRRY 10
EFV RY
Sbjct: 630 EFVNRY 635
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 YEEFVRR 9
Y E+VRR
Sbjct: 1304 YREYVRR 1310
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EEFVRRY 10
+EF+ RY
Sbjct: 6671 DEFIERY 6677
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 MYEEFVRR 9
MY EF R+
Sbjct: 3 MYPEFARK 10
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RMYEEFVRRY 10
++ EE++RR+
Sbjct: 170 KLMEEYLRRH 179
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RMYEEFVRRY 10
R+Y+ F+R +
Sbjct: 101 RLYQRFLREW 110
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 EFVRRY 10
EFV RY
Sbjct: 630 EFVNRY 635
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MYEEFVRR 9
MY EF R+
Sbjct: 3 MYPEFARK 10
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 2 MYEEFVRR 9
+YE F+R+
Sbjct: 176 VYEPFIRK 183
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 2 MYEEFVRR 9
MY EF R+
Sbjct: 3 MYPEFARK 10
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 2 MYEEFVRRY 10
+ EE++RR+
Sbjct: 161 LMEEYLRRH 169
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 4 EEFVRR 9
EE+VRR
Sbjct: 46 EEYVRR 51
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 EFVRRY 10
EFV RY
Sbjct: 632 EFVNRY 637
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 EFVRRY 10
EFV RY
Sbjct: 632 EFVNRY 637
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 EFVRRY 10
EFV RY
Sbjct: 632 EFVNRY 637
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 EFVRRY 10
EFV RY
Sbjct: 632 EFVNRY 637
12|SequenceR|65|56|RQSIVRMYEE
***** No hits found ******
13|SequenceR|70|61|RIDPYRQSIV
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 RIDPYRQSI 9
R+DPY S+
Sbjct: 1569 RLDPYWGSV 1577
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RIDPYRQSI 9
R+DPY S+
Sbjct: 1565 RLDPYWGSV 1573
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 RIDPYRQSI 9
R+DPY S+
Sbjct: 1569 RLDPYWGSV 1577
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 RIDPYRQS 8
++DP+R S
Sbjct: 798 KVDPFRPS 805
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 32 IDPYKE 37
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 DPYRQS 8
DPYR S
Sbjct: 800 DPYRPS 805
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 179 IDPYKE 184
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 15 IDPYKE 20
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 15 IDPYKE 20
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IDPYRQ 7
IDP+RQ
Sbjct: 260 IDPHRQ 265
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 15 IDPYKE 20
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 RIDPY 5
R+DPY
Sbjct: 1566 RLDPY 1570
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 RIDPY 5
R+DPY
Sbjct: 1566 RLDPY 1570
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 RIDPY 5
R+DPY
Sbjct: 1562 RLDPY 1566
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 RIDPY 5
R+DPY
Sbjct: 1563 RLDPY 1567
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 RIDPY 5
R+DPY
Sbjct: 1567 RLDPY 1571
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 RIDPYRQ 7
++DPY Q
Sbjct: 438 KVDPYAQ 444
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 IDPYRQ 7
IDPY++
Sbjct: 3 IDPYKE 8
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 RIDPYRQ 7
++DPY+
Sbjct: 483 KVDPYKN 489
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 RIDPYR 6
++DPY+
Sbjct: 451 KVDPYK 456
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 RIDPYRQ 7
++DPY+
Sbjct: 454 KVDPYKN 460
14|SequenceR|75|66|NEGEIRIDPY
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1563 GEGRLDPY 1570
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1563 GEGRLDPY 1570
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1559 GEGRLDPY 1566
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1566 GEGRLDPY 1573
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1562 GEGRLDPY 1569
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1560 GEGRLDPY 1567
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1566 GEGRLDPY 1573
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 GEIRIDPY 10
GE R+DPY
Sbjct: 1564 GEGRLDPY 1571
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 EGEIRID 8
EGE++ID
Sbjct: 875 EGELQID 881
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 4 EIRIDP 9
E+R+DP
Sbjct: 235 EVRVDP 240
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 4 EIRIDP 9
E+R+DP
Sbjct: 235 EVRVDP 240
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 EGEIRI 7
EGE+RI
Sbjct: 268 EGEVRI 273
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 GEIRIDPY 10
GE++ +PY
Sbjct: 795 GELKSNPY 802
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 GEIRIDPY 10
GE R+ PY
Sbjct: 1564 GEGRLTPY 1571
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 GEIRIDPY 10
GE R+ PY
Sbjct: 1564 GEGRLTPY 1571
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 2 EGEIRI 7
EGE+RI
Sbjct: 210 EGELRI 215
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 2 EGEIRI 7
EGE+RI
Sbjct: 210 EGELRI 215
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EGEIRI 7
EGE+RI
Sbjct: 210 EGELRI 215
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 2 EGEIRI 7
EGE+RI
Sbjct: 240 EGELRI 245
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 4 EIRIDP 9
+IRIDP
Sbjct: 350 KIRIDP 355
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 4 EIRIDP 9
+IRIDP
Sbjct: 350 KIRIDP 355
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 EGEIRIDP 9
EG ++ DP
Sbjct: 231 EGRLQFDP 238
15|SequenceR|80|71|PQPLYNEGEI
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PQPLYNEG 8
P P YN G
Sbjct: 225 PTPFYNTG 232
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PQPLYNEG 8
P P YN G
Sbjct: 225 PTPFYNTG 232
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 PQPLYNE 7
P+PLY++
Sbjct: 264 PEPLYSD 270
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 PQPLYNE 7
P+PLY++
Sbjct: 264 PEPLYSD 270
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 LYNEGEI 10
+YN+GEI
Sbjct: 1490 VYNKGEI 1496
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 LYNEGEI 10
+YN+GEI
Sbjct: 1490 VYNKGEI 1496
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 PQPLYNEG 8
P PL EG
Sbjct: 35 PSPLLTEG 42
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PQPLYNE 7
P P YNE
Sbjct: 487 PYPDYNE 493
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PQPLYNE 7
P P YNE
Sbjct: 487 PYPDYNE 493
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQPLYNE 7
P P YNE
Sbjct: 487 PYPDYNE 493
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 QPLYNEG 8
PLY EG
Sbjct: 424 HPLYEEG 430
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 YNEGEI 10
+NEGEI
Sbjct: 1815 FNEGEI 1820
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 QPLYNEGEI 10
+P Y GEI
Sbjct: 1416 RPTYGAGEI 1424
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 4 LYNEGEI 10
LY++GEI
Sbjct: 110 LYDKGEI 116
>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQPLYNEGEI 10
P P Y+E ++
Sbjct: 76 PSPTYHESQM 85
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 QPLYNEGEI 10
+PLY+E ++
Sbjct: 839 KPLYSESKV 847
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 PLYNEGE 9
PL+NE E
Sbjct: 891 PLHNEDE 897
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 PLYNEGE 9
PL+NE E
Sbjct: 891 PLHNEDE 897
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 PQPLYN 6
P+PLY+
Sbjct: 2005 PKPLYS 2010
16|SequenceR|85|76|IHRYIPQPLY
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 IHRYIPQP 8
IHR+ P P
Sbjct: 2134 IHRFAPTP 2141
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IHRYIPQP 8
IHR+ P P
Sbjct: 2134 IHRFAPTP 2141
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 IHRYIPQP 8
IHR+ P P
Sbjct: 2134 IHRFAPTP 2141
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IHRYIPQP 8
IHR+ P P
Sbjct: 2134 IHRFAPTP 2141
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IHRYIPQ 7
+HR++P+
Sbjct: 497 VHRFVPE 503
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IHRYIPQP 8
IHR+ P P
Sbjct: 2134 IHRFAPVP 2141
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 RYIPQPL 9
RY+P+P+
Sbjct: 1772 RYVPRPV 1778
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IHRYIPQP 8
IHR+ P P
Sbjct: 2134 IHRFAPIP 2141
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 IHRYIPQPL 9
I RY QP+
Sbjct: 194 IQRYFSQPV 202
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 IHRYIPQPL 9
I Y PQPL
Sbjct: 227 IPNYRPQPL 235
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 IHRYIP 6
IHRY P
Sbjct: 2135 IHRYAP 2140
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IHRYIP 6
IHRY P
Sbjct: 2135 IHRYAP 2140
Query: 5 IPQPLY 10
+PQP Y
Sbjct: 2781 VPQPTY 2786
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IHRYIP 6
IHRY P
Sbjct: 2131 IHRYAP 2136
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 IHRYIP 6
IHRY P
Sbjct: 2136 IHRYAP 2141
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IHRYIP 6
IHRY P
Sbjct: 2134 IHRYAP 2139
>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|IR14_HCMVA|UNCHARACTERIZED protein IRL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IHRYIPQ 7
IHR +PQ
Sbjct: 137 IHRAVPQ 143
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 IHRYIPQPL 9
+HR + +PL
Sbjct: 3082 MHRAVAEPL 3090
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 IHRYIPQ 7
+HRY P+
Sbjct: 2134 LHRYAPE 2140
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 IHRYIPQPL 9
I Y PQPL
Sbjct: 227 IPDYRPQPL 235
>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 IHRYIPQ 7
+HRY P+
Sbjct: 2131 LHRYAPR 2137
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 IHRYIPQPL 9
+ +YIPQ +
Sbjct: 240 VKKYIPQDM 248
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 IHRYIPQPL 9
+ +YIPQ +
Sbjct: 240 VKKYIPQDM 248
>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|I_MUMPJ|I virus genotype A (strain
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|I_MUMPZ|I virus genotype N (strain
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2130 LHRYAP 2135
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 5 IPQPLY 10
IP+PL+
Sbjct: 93 IPEPLF 98
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2138 LHRYAP 2143
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2136 LHRYAP 2141
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 IHRYIP 6
+HRY P
Sbjct: 2135 LHRYAP 2140
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 IHRYIPQPL 9
+ +IP+PL
Sbjct: 823 VRAWIPRPL 831
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 IHRYIPQPL 9
+ +IP+PL
Sbjct: 823 VRAWIPRPL 831
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 IHRYIP 6
I RYIP
Sbjct: 1593 IRRYIP 1598
17|SequenceR|90|81|SLFSAIHRYI
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 SLFSAIHRY 9
SL+SA+H Y
Sbjct: 849 SLYSALHGY 857
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SLFSAIHR 8
+LFSA H+
Sbjct: 1897 NLFSAFHK 1904
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 FSAIHRY 9
FSA+H Y
Sbjct: 1098 FSALHIY 1104
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 5 AIHRY 9
AIHRY
Sbjct: 361 AIHRY 365
>sp|U148A_HCMVM|PROTEIN UL148A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LFSAIHRYI 10
LF+ +H Y+
Sbjct: 24 LFAGLHVYL 32
18|SequenceR|95|86|VLKFVSLFSA
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 VLKFVSLFS 9
VLK VSLFS
Sbjct: 1607 VLKAVSLFS 1615
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 KFVSLFS 9
KFVSLF+
Sbjct: 3896 KFVSLFA 3902
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 FVSLFS 9
FVSLFS
Sbjct: 398 FVSLFS 403
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 KFVSLFS 9
KFVSLF+
Sbjct: 3896 KFVSLFA 3902
19|SequenceR|100|91|ILGILVLKFV
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 976 LGMMVLKMV 984
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKMV 1264
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKMV 1264
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKMV 1264
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKMV 1264
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKMV 1264
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKMV 1264
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LGILVLKFV 10
LG++VLK V
Sbjct: 1256 LGMMVLKIV 1264
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 GILVLKF 9
G+L+LK+
Sbjct: 1942 GVLILKY 1948
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 GILVLKF 9
G+L+LK+
Sbjct: 1942 GVLILKY 1948
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LGILVLKFV 10
+GI++LK +
Sbjct: 1255 MGIMILKLL 1263
20|SequenceR|105|96|DKGVIILGIL
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG+L
Sbjct: 503 RGVFVLGVL 511
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 GVIILGI 9
GVIILG+
Sbjct: 9 GVIILGV 15
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KGVIILGIL 10
+G++ LGIL
Sbjct: 16 RGILFLGIL 24
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV++LG L
Sbjct: 503 RGVLVLGFL 511
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV++LG L
Sbjct: 509 RGVLVLGFL 517
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV++LG L
Sbjct: 514 RGVMVLGFL 522
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV++LG L
Sbjct: 513 RGVMVLGFL 521
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 DKGVIIL 7
D+G+IIL
Sbjct: 263 DRGIIIL 269
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 GVIILGIL 10
GV+ LGIL
Sbjct: 1313 GVLTLGIL 1320
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 1 DKGVIILGIL 10
D G+II+ I
Sbjct: 111 DDGIIIIAIF 120
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 1 DKGVIILGIL 10
D G+II+ I
Sbjct: 111 DDGIIIIAIF 120
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 505 RGVFVLGFL 513
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 505 RGVFVLGFL 513
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 511 RGVFVLGFL 519
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 502 RGVFVLGFL 510
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 502 RGVFVLGFL 510
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 501 RGVFVLGFL 509
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 KGVIILGIL 10
+GV +LG L
Sbjct: 510 RGVFVLGFL 518
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 GVIILG 8
GVIILG
Sbjct: 9 GVIILG 14
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 GVIILG 8
GVIILG
Sbjct: 9 GVIILG 14
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GVIILGIL 10
G++ LGIL
Sbjct: 17 GILFLGIL 24
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 GVIILGIL 10
G+++LG+L
Sbjct: 1167 GILMLGLL 1174
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GVIILGIL 10
G+++LG+L
Sbjct: 16 GILLLGML 23
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 KGVIILGI 9
KG ++LG+
Sbjct: 1339 KGAVLLGL 1346
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 KGVIILGI 9
KG ++LG+
Sbjct: 1268 KGAVLLGL 1275
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 KGVIILGI 9
KG ++LG+
Sbjct: 1340 KGAVLLGL 1347
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 KGVIILGI 9
KG ++LG+
Sbjct: 1340 KGAVLLGL 1347
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 KGVIILGI 9
KG ++LG+
Sbjct: 1340 KGAVLLGL 1347
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 KGVIILGI 9
KG ++LG+
Sbjct: 1340 KGAVLLGL 1347
21|SequenceR|110|101|FFAFPDKGVI
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 FFAFPDKGVI 10
FF PD+G +
Sbjct: 115 FFTVPDEGFM 124
Query: 3 AFPDKGVI 10
A PD+G++
Sbjct: 1906 ALPDEGIV 1913
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 FFAFPDKGVI 10
FF PD+G +
Sbjct: 115 FFTVPDEGFM 124
Query: 3 AFPDKGVI 10
A PD+G++
Sbjct: 1906 ALPDEGIV 1913
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 FFAFPDK 7
FF FP+K
Sbjct: 545 FFKFPNK 551
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 FAFPDKGVI 10
FAFPD I
Sbjct: 8 FAFPDNETI 16
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 2 FAFPDK 7
FAFP+K
Sbjct: 546 FAFPNK 551
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 2 FAFPDK 7
FAFP+K
Sbjct: 546 FAFPNK 551
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FFAFPDKGVI 10
FF FP+ ++
Sbjct: 297 FFIFPNYTIV 306
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FFAFPDKGVI 10
FF FP+ ++
Sbjct: 297 FFIFPNYTIV 306
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FFAFPDKGVI 10
FF FP+ ++
Sbjct: 297 FFIFPNYTIV 306
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FPDKGVI 10
+P+KG++
Sbjct: 87 YPEKGIV 93
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 4 FPDKGVI 10
+P+KG++
Sbjct: 87 YPEKGIV 93
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 FAFPDK 7
FAFP K
Sbjct: 539 FAFPHK 544
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 2 FAFPDKGV 9
FAF DK +
Sbjct: 87 FAFGDKAI 94
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAFPDKGVI 10
+A P KG+I
Sbjct: 446 YALPIKGLI 454
22|SequenceR|115|106|PAQMGFFAFP
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 MGFFAF 9
MG+FAF
Sbjct: 6980 MGYFAF 6985
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 PAQMGFFAF 9
PA++G F F
Sbjct: 1986 PAEVGLFGF 1994
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 AQMGFFAFP 10
A+ GF FP
Sbjct: 627 AEKGFVGFP 635
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 AQMGFFAFP 10
+Q GFF P
Sbjct: 724 SQFGFFVNP 732
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 813 PKQCGFF 819
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 816 PKQCGFF 822
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 816 PKQCGFF 822
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 816 PKQCGFF 822
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 815 PKQCGFF 821
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 815 PKQCGFF 821
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 815 PKQCGFF 821
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 815 PKQCGFF 821
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 813 PKQCGFF 819
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 813 PKQCGFF 819
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 814 PKQCGFF 820
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 816 PKQCGFF 822
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 813 PKQCGFF 819
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 816 PKQCGFF 822
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 818 PKQCGFF 824
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 814 PKQCGFF 820
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 817 PKQCGFF 823
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 815 PKQCGFF 821
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 815 PKQCGFF 821
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 821 PKQCGFF 827
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 PAQMGFF 7
P Q GFF
Sbjct: 821 PMQCGFF 827
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 AQMGFFAFP 10
A GF FP
Sbjct: 627 AAKGFIGFP 635
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 AQMGFFAFP 10
A GF FP
Sbjct: 627 AAKGFIGFP 635
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 PAQMGFFAFP 10
P+ G F FP
Sbjct: 173 PSGSGHFYFP 182
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 5 GFFAFP 10
G FAFP
Sbjct: 6 GVFAFP 11
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 1 PAQMGFFAFP 10
P+ G F FP
Sbjct: 173 PSGSGHFYFP 182
23|SequenceR|120|111|WQWISPAQMG
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 WQWISPAQMG 10
W I+P Q+G
Sbjct: 81 WMLIAPTQIG 90
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 WQWISPAQMG 10
W I+P Q+G
Sbjct: 80 WMLIAPTQIG 89
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WQWISPAQM 9
+QW+SP ++
Sbjct: 11 YQWMSPHRL 19
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 1 WQWISPAQM 9
+QW+SP ++
Sbjct: 11 YQWMSPHRL 19
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WQWISPAQM 9
+QW+SP ++
Sbjct: 11 YQWMSPHRL 19
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WQWISPAQM 9
+QW+SP ++
Sbjct: 11 YQWMSPHRL 19
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 WQWISPAQM 9
+QW+SP ++
Sbjct: 11 YQWMSPHRL 19
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 WQWISP 6
+QW+SP
Sbjct: 11 YQWMSP 16
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 WQWISPA 7
WQ SPA
Sbjct: 15 WQLTSPA 21
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 QWISPAQM 9
+W++PA M
Sbjct: 47 KWLNPACM 54
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 2 QWISPAQM 9
+W++PA M
Sbjct: 49 KWLNPACM 56
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 WISPAQMG 10
WISP +G
Sbjct: 751 WISPGLLG 758
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 QWISPAQ 8
+WI PA+
Sbjct: 1449 KWIVPAE 1455
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 QWISPAQMG 10
+W PA +G
Sbjct: 325 RWFKPAVVG 333
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 QWISPAQ 8
+WI PA+
Sbjct: 1442 RWIIPAE 1448
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 2 QWISPAQMG 10
QW+ PA +
Sbjct: 95 QWLLPASVA 103
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 WQWISPAQM 9
WQ ++PA +
Sbjct: 2373 WQQLTPATL 2381
>sp|TEG3_HHV11|TEGUMENT protein UL14|Human herpesvirus 1 (strain 17)
Query: 3 WISPA 7
W+SPA
Sbjct: 139 WMSPA 143
24|SequenceR|125|116|KNEQGWQWIS
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 KNEQGWQW 8
+ +QGW W
Sbjct: 223 RRQQGWSW 230
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 KNEQGWQW 8
K QGW W
Sbjct: 142 KESQGWWW 149
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 KNEQGWQW 8
KN GW W
Sbjct: 142 KNSAGWWW 149
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GWQWIS 10
GW WI+
Sbjct: 329 GWSWIA 334
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 5 GWQWIS 10
GW WI+
Sbjct: 329 GWSWIA 334
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 6 WQWI 9
WQWI
Sbjct: 1113 WQWI 1116
>sp|UL42_HCMVT|PROTEIN UL42|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 EQGWQW 8
+ GW+W
Sbjct: 81 DNGWKW 86
>sp|UL42_HCMVM|PROTEIN UL42|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EQGWQW 8
+ GW+W
Sbjct: 81 DNGWKW 86
>sp|UL42_HCMVA|PROTEIN UL42|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EQGWQW 8
+ GW+W
Sbjct: 81 DNGWKW 86
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 5 GWQWIS 10
WQW++
Sbjct: 1206 AWQWLA 1211
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 QGWQW 8
QGW W
Sbjct: 765 QGWVW 769
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 NEQGWQWI 9
N GWQ+I
Sbjct: 647 NCYGWQYI 654
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 6 WQWI 9
WQW+
Sbjct: 1106 WQWL 1109
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 2 NEQGWQ 7
NE GW+
Sbjct: 551 NESGWK 556
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NEQGWQ 7
NE GW+
Sbjct: 551 NESGWK 556
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NEQGWQ 7
NE GW+
Sbjct: 551 NESGWK 556
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NEQGWQ 7
NE GW+
Sbjct: 551 NESGWK 556
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 NEQGWQ 7
NE GW+
Sbjct: 551 NESGWK 556
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 6 WQWI 9
WQW+
Sbjct: 1106 WQWL 1109
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EQGWQWI 9
E+GW+++
Sbjct: 657 EKGWEFV 663
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EQGWQWI 9
E+GW+++
Sbjct: 657 EKGWEFV 663
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EQGWQWI 9
E+GW+++
Sbjct: 657 EKGWEFV 663
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EQGWQWI 9
E+GW+++
Sbjct: 657 EKGWEFV 663
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 6 WQWI 9
WQW+
Sbjct: 1106 WQWL 1109
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 6 WQWI 9
WQW+
Sbjct: 1108 WQWL 1111
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 6 WQWI 9
WQW+
Sbjct: 1105 WQWL 1108
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 6 WQWI 9
WQW+
Sbjct: 1108 WQWL 1111
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 EQGWQWI 9
E+GW+++
Sbjct: 656 EKGWEFV 662
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 6 WQWI 9
WQW+
Sbjct: 1105 WQWL 1108
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 4 QGWQWIS 10
+ W WIS
Sbjct: 249 RSWPWIS 255
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 4 QGWQWIS 10
QG++W S
Sbjct: 348 QGFEWCS 354
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 KNEQGWQW 8
K E G++W
Sbjct: 1797 KTESGFEW 1804
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 KNEQGWQW 8
K E G++W
Sbjct: 1796 KTESGFEW 1803
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 KNEQGWQW 8
K E G++W
Sbjct: 1796 KTESGFEW 1803
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 KNEQGWQW 8
K E G++W
Sbjct: 1796 KTESGFEW 1803
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 NEQGWQWI 9
NE WQ++
Sbjct: 352 NEFSWQYL 359
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 KNEQGWQW 8
K E G++W
Sbjct: 1797 KTESGFEW 1804
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 6 WQWIS 10
WQW +
Sbjct: 331 WQWTT 335
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 EQGWQW 8
E GW W
Sbjct: 592 EDGWFW 597
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 6 WQWIS 10
WQW S
Sbjct: 14 WQWYS 18
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QGWQWIS 10
QG++W S
Sbjct: 348 QGFEWCS 354
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QGWQWI 9
Q W W+
Sbjct: 244 QSWYWL 249
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GWQWIS 10
GW W++
Sbjct: 11 GWWWLT 16
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 6 WQWIS 10
WQW S
Sbjct: 14 WQWYS 18
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GWQWIS 10
GW W++
Sbjct: 11 GWWWLT 16
25|SequenceR|130|121|MCAYVKNEQG
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 2 CAYVKNEQ 9
C Y K+EQ
Sbjct: 172 CCYRKHEQ 179
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 CAYVKNEQ 9
C Y K+EQ
Sbjct: 172 CCYRKHEQ 179
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 MCAYVKNEQG 10
+C + KN+ G
Sbjct: 908 ICLFKKNQHG 917
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 MCAYVKNEQG 10
+CA V+N G
Sbjct: 925 ICALVQNVAG 934
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 MCAYVKN 7
M AYV+N
Sbjct: 2073 MAAYVEN 2079
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 MCAYVKN 7
M AYV+N
Sbjct: 2073 MAAYVEN 2079
26|SequenceR|135|126|LFFVMMCAYV
>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LFFVMMCAYV 10
+F + +CAY+
Sbjct: 55 VFMIFLCAYL 64
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 FFVMMCAY 9
FV+ CA+
Sbjct: 5 LFVLFCAF 12
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LFFVMMCAY 9
L+F ++C Y
Sbjct: 6 LYFSLICFY 14
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 FFVMMCA 8
FF+ CA
Sbjct: 768 FFIFFCA 774
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 FFVMMCA 8
FF+ CA
Sbjct: 768 FFIFFCA 774
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 LFFVMMCAYV 10
+FF+MM +
Sbjct: 2197 VFFIMMVVII 2206
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 FFVMMC 7
FF+++C
Sbjct: 469 FFILIC 474
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 FFVMMC 7
F+V MC
Sbjct: 39 FYVQMC 44
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FFVMMCAYV 10
FF +C ++
Sbjct: 6924 FFTYLCGFI 6932
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FFVMMCAYV 10
FF +C ++
Sbjct: 6947 FFTYICGFI 6955
27|SequenceR|140|131|EIMNSLFFVM
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 4 NSLFFVM 10
NSLFF +
Sbjct: 270 NSLFFFL 276
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 4 NSLFFVM 10
NSLFF +
Sbjct: 242 NSLFFFL 248
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 4 NSLFFVM 10
NSLFF +
Sbjct: 242 NSLFFFL 248
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 EIMNSLFFV 9
+++NSLFF+
Sbjct: 222 KLINSLFFL 230
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 IMNSLFFV 9
I+NSLF +
Sbjct: 1003 IINSLFHI 1010
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 IMNSLF 7
+MNSLF
Sbjct: 3776 LMNSLF 3781
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 IMNSLFFV 9
I+NSLF +
Sbjct: 1003 IINSLFHI 1010
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 IMNSLFFV 9
I+NSLF +
Sbjct: 1003 IINSLFHI 1010
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 IMNSLFFV 9
I+NSLF +
Sbjct: 1003 IINSLFHI 1010
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 IMNSLFFV 9
I+NSLF +
Sbjct: 1003 IINSLFHI 1010
28|SequenceR|145|136|SMCQNEIMNS
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 MCQNEI 7
MCQN+I
Sbjct: 162 MCQNDI 167
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 1 SMCQNEIMN 9
+MC N I+N
Sbjct: 395 AMCSNMILN 403
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 1 SMCQNEIMN 9
S+CQ+E+ N
Sbjct: 130 SLCQDEVDN 138
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 4 QNEIMNS 10
QN IMN+
Sbjct: 194 QNSIMNT 200
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 1 SMCQNEIMN 9
++C E+MN
Sbjct: 59 TLCWGELMN 67
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 SMCQNEIMN 9
++C E+MN
Sbjct: 88 TLCWGELMN 96
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 MCQNEI 7
MC+N+I
Sbjct: 165 MCKNDI 170
>sp|A49_VARV|PROTEIN A49|Variola virus
Query: 2 MCQNEIMNS 10
+ QNE++NS
Sbjct: 76 IYQNELINS 84
>sp|A49_VAR67|PROTEIN A49|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 MCQNEIMNS 10
+ QNE++NS
Sbjct: 76 IYQNELINS 84
29|SequenceR|150|141|EFAGTSMCQN
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
EF GT C+N
Sbjct: 228 EFNGTGTCRN 237
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT +C N
Sbjct: 232 DFNGTGLCHN 241
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT +C+N
Sbjct: 234 FNGTGLCRN 242
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT +C+N
Sbjct: 237 KFNGTEICKN 246
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C+N
Sbjct: 235 FTGTGSCKN 243
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT +C N
Sbjct: 226 FNGTGLCTN 234
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
E+ GT C+N
Sbjct: 230 EYNGTGPCKN 239
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C+N
Sbjct: 227 FNGTGSCKN 235
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C N
Sbjct: 230 FTGTGPCHN 238
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
EF G C+N
Sbjct: 233 EFEGKGPCRN 242
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C+N
Sbjct: 240 FNGTGPCKN 248
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 5 TSMCQN 10
TSMC N
Sbjct: 472 TSMCTN 477
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C+N
Sbjct: 245 KFNGTGPCKN 254
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C+N
Sbjct: 229 FNGTGPCKN 237
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F+G C+N
Sbjct: 237 KFSGKGSCKN 246
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C+N
Sbjct: 235 FNGTGPCKN 243
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C+N
Sbjct: 224 FNGTGPCKN 232
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 AGTSMC 8
AGTS C
Sbjct: 126 AGTSQC 131
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 AGTSMC 8
AGTS C
Sbjct: 126 AGTSQC 131
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 227 KFNGTGPCSN 236
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 229 KFNGTGPCTN 238
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 AGTSMCQN 10
AG+ +C N
Sbjct: 2055 AGSGLCAN 2062
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 228 KFNGTGPCTN 237
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 243 KFNGTGPCTN 252
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 232 KFNGTGPCTN 241
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 244 KFNGTGPCTN 253
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 232 KFNGTGPCTN 241
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C N
Sbjct: 231 FNGTGPCNN 239
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 237 KFNGTGPCTN 246
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 232 KFNGTGPCTN 241
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 235 KFNGTGPCTN 244
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F GT C N
Sbjct: 233 KFNGTGPCTN 242
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EFAGTSMCQN 10
+F+G C N
Sbjct: 233 KFSGKGQCTN 242
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C N
Sbjct: 233 FNGTGPCTN 241
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C N
Sbjct: 233 FNGTGPCTN 241
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C N
Sbjct: 233 FNGTGPCTN 241
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 FAGTSMCQN 10
F GT C N
Sbjct: 233 FNGTGPCTN 241
30|SequenceR|155|146|DNLTIEFAGT
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DNLTIEFAG 9
DN+T+E G
Sbjct: 547 DNVTVEIEG 555
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DNLTIEFAG 9
DN+TI+ G
Sbjct: 558 DNITIDIQG 566
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NLTIEFAG 9
N+TI F G
Sbjct: 205 NITIRFTG 212
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NLTIEFAG 9
N+TI F G
Sbjct: 205 NITIRFTG 212
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 DNLTIEFAG 9
DN ++F G
Sbjct: 1016 DNFEVDFVG 1024
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 DNLTIEFAG 9
DN ++F G
Sbjct: 1016 DNFEVDFVG 1024
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 DNLTIEFA 8
DNL I+F+
Sbjct: 1002 DNLIIQFS 1009
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DNLTIEFAGT 10
DN+ + +AG+
Sbjct: 4127 DNVYVAYAGS 4136
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DNLTIEFAGT 10
DN+ + +AG+
Sbjct: 4107 DNVYVTYAGS 4116
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DNLTIEFAGT 10
DN+ + +AG+
Sbjct: 4157 DNVYVTYAGS 4166
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 DNLTIEFAGT 10
DN+ + +AG+
Sbjct: 4107 DNVYVTYAGS 4116
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 DNLTIEFAGT 10
DN+ + +AG+
Sbjct: 4127 DNVYVAYAGS 4136
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 DNLTIEFAGT 10
DN+ + +AG+
Sbjct: 4157 DNVYVTYAGS 4166
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DNLTIEFAG 9
DN+ + +AG
Sbjct: 4069 DNIYVTYAG 4077
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DNLTIEFAG 9
DN+ + +AG
Sbjct: 4069 DNIYVTYAG 4077
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DNLTIEF 7
DNL I+F
Sbjct: 93 DNLNIQF 99
31|SequenceR|160|151|SWVPVDNLTI
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 2 WVPVDN 7
W+P DN
Sbjct: 19 WIPSDN 24
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 2 WVPVDN 7
W+P DN
Sbjct: 19 WIPSDN 24
>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain
Query: 2 WVPVDNL 8
W+P DN+
Sbjct: 312 WIPPDNI 318
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 984 AWTPFDN 990
Query: 4 PVDNLT 9
P+DN+T
Sbjct: 592 PLDNIT 597
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 978 AWTPFDN 984
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 978 AWTPFDN 984
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 978 AWTPFDN 984
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 984 AWTPFDN 990
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 984 AWTPFDN 990
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 3 VPVDNLTI 10
VP DNL I
Sbjct: 142 VPTDNLDI 149
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 3 VPVDNLTI 10
VP DNL I
Sbjct: 142 VPTDNLDI 149
>sp|NSP5_ROTGA|NON-STRUCTURAL protein 5|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 5 VDNLTI 10
VDNLTI
Sbjct: 150 VDNLTI 155
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 2 WVPVDNL 8
W+P DN
Sbjct: 314 WIPPDNF 320
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 985 AWSPFDN 991
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 SWVPVDNLTI 10
S VP+++LTI
Sbjct: 111 SVVPLEDLTI 120
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 977 AWSPFDN 983
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 985 AWSPFDN 991
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 977 AWSPFDN 983
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SWVPVDN 7
+W P DN
Sbjct: 977 AWSPFDN 983
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 WVPVDNLTI 10
W+P D + I
Sbjct: 6863 WLPTDAIII 6871
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 SWVPVDNLTI 10
+W P DN +
Sbjct: 971 AWSPFDNKVV 980
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 SWVPVDNLTI 10
+W P DN +
Sbjct: 968 AWSPFDNKVV 977
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 SWVPVDNLTI 10
+W P DN +
Sbjct: 969 AWSPFDNKVV 978
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SWVPVDN 7
S VPVDN
Sbjct: 381 SVVPVDN 387
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 WVPVDN 7
+VPVDN
Sbjct: 670 FVPVDN 675
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 WVPVDN 7
+VPVDN
Sbjct: 670 FVPVDN 675
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 WVPVDN 7
+VPVDN
Sbjct: 670 FVPVDN 675
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 WVPVDN 7
+VPVDN
Sbjct: 670 FVPVDN 675
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 WVPVDN 7
+VPVDN
Sbjct: 670 FVPVDN 675
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 WVPVDN 7
+VPVDN
Sbjct: 670 FVPVDN 675
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 WVPVDNLTI 10
W P D LT+
Sbjct: 33 WYPTDLLTV 41
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 VPVDNLTI 10
VP NLT+
Sbjct: 68 VPAQNLTL 75
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 3 VPVDNLTI 10
VPVDN +
Sbjct: 141 VPVDNAVV 148
>sp|VL2_HPV65|MINOR capsid protein L2|Human papillomavirus 65
Query: 1 SWVPVDNLTI 10
S VP+++LT+
Sbjct: 111 SVVPLEDLTV 120
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 SWVPVDNLT 9
S VPV+NL+
Sbjct: 382 SVVPVNNLS 390
>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WVPVD 6
WVP D
Sbjct: 128 WVPTD 132
>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WVPVD 6
WVP D
Sbjct: 128 WVPTD 132
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 3 VPVDNLTI 10
VP DN+ I
Sbjct: 141 VPTDNVDI 148
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 PVDNLT 9
P+DN+T
Sbjct: 592 PLDNIT 597
32|SequenceR|165|156|GSELKSWVPV
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 SELKSWVPV 10
++++SWVP+
Sbjct: 331 TDMRSWVPL 339
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 SELKSWVPV 10
++++SW+P+
Sbjct: 331 TDMQSWIPL 339
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 GSELKSWVPV 10
G E+K+ VPV
Sbjct: 199 GKEIKTKVPV 208
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 GSELKSWVPV 10
G E+K+ VPV
Sbjct: 199 GKEIKTKVPV 208
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 GSELKSWVPV 10
G E+K+ VPV
Sbjct: 199 GKEIKTKVPV 208
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 GSELKSWVPV 10
G+ K WVPV
Sbjct: 105 GNASKCWVPV 114
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 SELKSWVPV 10
++++SWVP+
Sbjct: 331 TDMQSWVPL 339
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 SELKSWVPV 10
++++SWVP+
Sbjct: 331 TDMQSWVPL 339
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LKSWVPV 10
L SW PV
Sbjct: 574 LSSWTPV 580
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LKSWVPV 10
L SW PV
Sbjct: 574 LSSWTPV 580
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 2 SELKSW 7
SE+KSW
Sbjct: 212 SEIKSW 217
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 2 SELKSW 7
SELK+W
Sbjct: 210 SELKAW 215
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 2 SELKSW 7
SELK+W
Sbjct: 210 SELKAW 215
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 2 SELKSW 7
SELK+W
Sbjct: 210 SELKAW 215
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GSELKSWVPV 10
G++ + WVPV
Sbjct: 233 GNKSRCWVPV 242
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GSELKSWVPV 10
G++ + WVPV
Sbjct: 233 GNKSQCWVPV 242
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 4 LKSWVPV 10
++SWVP+
Sbjct: 333 MQSWVPL 339
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 LKSWV 8
LKSWV
Sbjct: 2041 LKSWV 2045
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GSELKSWVPV 10
G+ + WVPV
Sbjct: 233 GNTSRCWVPV 242
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SELKSWV 8
SELK W+
Sbjct: 310 SELKFWL 316
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 2 SELKSW 7
SE+K+W
Sbjct: 209 SEIKAW 214
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 6 SWVPV 10
SW+P+
Sbjct: 450 SWIPI 454
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 6 SWVPV 10
SW+P+
Sbjct: 450 SWIPI 454
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 6 SWVPV 10
SW+P+
Sbjct: 450 SWIPI 454
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 SELKSWV 8
SEL+ W+
Sbjct: 191 SELRRWI 197
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 6 SWVPV 10
SW+P+
Sbjct: 450 SWIPI 454
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 6 SWVPV 10
SW+P+
Sbjct: 450 SWIPI 454
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 4 LKSWVPV 10
L W+PV
Sbjct: 122 LSEWLPV 128
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 LKSWV 8
LKSW+
Sbjct: 1560 LKSWI 1564
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 LKSWV 8
LKSW+
Sbjct: 1560 LKSWI 1564
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GSELKSWVPV 10
G+ + W+PV
Sbjct: 233 GNTSRCWIPV 242
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GSELKSWVPV 10
G K W+P+
Sbjct: 239 GRRRKGWIPL 248
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 4 LKSWVPV 10
+K+W+P+
Sbjct: 153 MKTWIPL 159
33|SequenceR|170|161|MSPLHGSELK
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MSPLHGSELK 10
+SP HG E++
Sbjct: 107 LSPEHGGEVR 116
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 MSPLHGSELK 10
+SP HG E++
Sbjct: 107 LSPEHGGEVR 116
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MSPLHGSELK 10
+SP HG E++
Sbjct: 107 LSPEHGGEVR 116
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 4 LHGSELK 10
LHGSE++
Sbjct: 181 LHGSEIR 187
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 SPLHG 6
SPLHG
Sbjct: 595 SPLHG 599
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 SPLHG 6
SPLHG
Sbjct: 595 SPLHG 599
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PLHGSE 8
PL+GSE
Sbjct: 84 PLYGSE 89
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 2 SPLHGSEL 9
+PL+GS++
Sbjct: 299 TPLYGSDV 306
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 2 SPLHGSEL 9
+PL+GS++
Sbjct: 299 TPLYGSDV 306
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 469 PQHGKEL 475
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 469 PQHGKEL 475
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 469 PQHGKEL 475
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 470 PQHGKEL 476
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 3 PLHGSELK 10
P+H E+K
Sbjct: 115 PIHSPEIK 122
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 470 PQHGKEL 476
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1)
Query: 1 MSPLHGSE 8
M P+ GSE
Sbjct: 39 MDPMEGSE 46
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 1 MSPLHGSE 8
M P+ GSE
Sbjct: 39 MDPMEGSE 46
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 470 PQHGKEL 476
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 4 LHGSELK 10
LHGSE++
Sbjct: 181 LHGSEIR 187
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 PLHGSEL 9
P HG EL
Sbjct: 470 PQHGKEL 476
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 PLHGSELK 10
PL G EL+
Sbjct: 130 PLEGEELE 137
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 HGSELK 10
HG ELK
Sbjct: 158 HGKELK 163
34|SequenceR|175|166|QVLQQMSPLH
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QVLQQMSPLH 10
+++QQM P H
Sbjct: 3041 KIIQQMDPEH 3050
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QVLQQMSPLH 10
++ QQM P H
Sbjct: 3041 KITQQMDPEH 3050
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QVLQQMSPLH 10
++ QQM P H
Sbjct: 3041 KITQQMDPEH 3050
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QVLQQMSPLH 10
++ QQM P H
Sbjct: 3041 KITQQMDPEH 3050
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 QVLQQMSPLH 10
++ QQM P H
Sbjct: 3041 KITQQMDPEH 3050
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 VLQQMSP 8
V+QQ+SP
Sbjct: 184 VIQQLSP 190
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VLQQMSPLH 10
+ +QM+P H
Sbjct: 3040 ITEQMAPHH 3048
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VLQQMSPLH 10
+ +QM+P H
Sbjct: 3040 ITEQMAPHH 3048
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VLQQMSPLH 10
+ +QM+P H
Sbjct: 3040 ITEQMAPHH 3048
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VLQQMSPLH 10
+ +QM+P H
Sbjct: 3040 ITEQMAPHH 3048
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 VLQQMSPLH 10
+ +QM+P H
Sbjct: 3040 ITEQMAPHH 3048
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 VLQQMSPL 9
+LQQ SP+
Sbjct: 1182 LLQQQSPI 1189
35|SequenceR|180|171|ENDLIQVLQQ
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ENDLIQVLQ 9
E D +QVL+
Sbjct: 157 ETDTVQVLE 165
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 ENDLIQVLQQ 10
ENDL +L+Q
Sbjct: 26 ENDLDTLLEQ 35
36|SequenceR|185|176|VNLKMENDLI
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 244 LKMQNDI 250
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 235 LKMQNDI 241
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 233 LKMQNDV 239
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 237 LKMQNDV 243
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 237 LKMQNDV 243
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 235 LKMQNDV 241
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 235 LKMQNDV 241
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 234 LKMQNDV 240
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 237 LKMQNDV 243
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 235 LKMQNDV 241
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 235 LKMQNDV 241
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 3 LKMENDL 9
LKM+ND+
Sbjct: 264 LKMQNDV 270
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 113 MKIENDCI 120
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 114 MKIENDCI 121
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 116 MKIENDCI 123
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 116 MKIENDCI 123
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 106 MKIENDCI 113
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 106 MKIENDCI 113
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 106 MKIENDCI 113
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 114 MKIENDCI 121
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 107 MKIENDCI 114
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 107 MKIENDCI 114
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 107 MKIENDCI 114
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 99 MKIENDCI 106
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 113 MKIENDCI 120
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 LKMENDLI 10
+K+END I
Sbjct: 107 MKIENDCI 114
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 VNLKMEN 7
+NLK+EN
Sbjct: 133 MNLKVEN 139
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 3 LKMENDL 9
LKM ND+
Sbjct: 236 LKMANDI 242
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 NLKMENDL 9
N K++NDL
Sbjct: 730 NFKLQNDL 737
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 NLKMENDL 9
N K++NDL
Sbjct: 730 NFKLQNDL 737
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NLKMENDLI 10
NLK + DL+
Sbjct: 253 NLKEQEDLV 261
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 VNLKMENDL 9
+NL +END
Sbjct: 51 MNLTVENDF 59
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VNLKMENDL 9
+NL +END
Sbjct: 51 MNLTVENDF 59
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 VNLKMENDLI 10
+NL +END
Sbjct: 51 LNLTVENDFF 60
Query: 1 VNLKMENDLI 10
+N K +ND +
Sbjct: 566 LNFKSQNDFV 575
37|SequenceR|195|181|SRHHPISDMHVNLKM
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 HPISDMH 10
HP+ DMH
Sbjct: 978 HPLEDMH 984
Query: 5 PISDMHVNL 13
P+SD H+ L
Sbjct: 609 PVSDYHLVL 617
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne)
Query: 3 HHPISDMHVNL 13
HHPI + H N+
Sbjct: 7 HHPILNPHTNI 17
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 1 SRHHPIS 7
SRHHP S
Sbjct: 236 SRHHPKS 242
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 5 PISDMH 10
P+SDMH
Sbjct: 371 PLSDMH 376
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 5 PISDMH 10
P+SDMH
Sbjct: 371 PLSDMH 376
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 1 SRHHPIS 7
SRHHP S
Sbjct: 45 SRHHPKS 51
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 SRHHPISDMHVNLKM 15
++H P+ ++H ++ +
Sbjct: 611 AQHQPLPELHADVPL 625
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SRHHPISDMHVN 12
+ HH I ++H N
Sbjct: 5846 TNHHAICNVHRN 5857
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 5 PISDMHV 11
PISD+HV
Sbjct: 196 PISDVHV 202
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RHHPISDMHVNLKM 15
RHHP + NL +
Sbjct: 6485 RHHPELKLFRNLNI 6498
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 5 PISDMHVNL 13
P++D+++NL
Sbjct: 347 PVTDININL 355
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRHHPISDM 9
+RHH +SD+
Sbjct: 746 ARHHGVSDV 754
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRHHPISDM 9
+RHH +SD+
Sbjct: 746 ARHHGVSDV 754
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 4 HPISDM 9
HPISD+
Sbjct: 135 HPISDI 140
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 SRHHPISDMHVN 12
+RHHP + N
Sbjct: 65 TRHHPATPTSAN 76
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 RHHPI 6
RHHP+
Sbjct: 504 RHHPV 508
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 5 PISDMHVNLK 14
PI+++ NLK
Sbjct: 384 PINNLQANLK 393
Query: 5 PISDMHVNLK 14
PI D+H +++
Sbjct: 2115 PIKDIHESIR 2124
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 1 SRHHPISDMHVNLKM 15
+R SD+ V +KM
Sbjct: 285 TRREKESDLEVGIKM 299
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SRHHPIS 7
+RH+P+S
Sbjct: 931 NRHYPVS 937
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 SRHHPISDM 9
+ H PISD+
Sbjct: 147 TSHDPISDV 155
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SRHHPIS 7
S+H+P+S
Sbjct: 918 SKHYPVS 924
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related
Query: 4 HPISDMHVNLKM 15
P+S+ H+ L +
Sbjct: 88 QPVSEYHITLAL 99
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn
Query: 1 SRHHPIS 7
S+HHP S
Sbjct: 31 SQHHPSS 37
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 1 SRHHPISDMHVNLKM 15
+R SD+ V +KM
Sbjct: 285 TRREKGSDLEVGIKM 299
>sp|A49_VACCA|PROTEIN A49|Vaccinia virus (strain Ankara) (VACV)
Query: 6 ISDMHVNL 13
+SDMH L
Sbjct: 17 VSDMHTEL 24
>sp|NSP2_ROTH3|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 PISDMHV 11
PISD HV
Sbjct: 196 PISDGHV 202
>sp|A49_VARV|PROTEIN A49|Variola virus
Query: 6 ISDMHVNL 13
+SDMH L
Sbjct: 17 VSDMHTKL 24
>sp|A49_VAR67|PROTEIN A49|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 ISDMHVNL 13
+SDMH L
Sbjct: 17 VSDMHTKL 24
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 SRHHP 5
+RHHP
Sbjct: 86 ARHHP 90
>sp|A49_VACCC|PROTEIN A49|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 ISDMHVNL 13
+SDMH L
Sbjct: 17 VSDMHTEL 24
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 HHPISD 8
HHPI +
Sbjct: 193 HHPIDE 198
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 PISDMHVNLK 14
PI M++N K
Sbjct: 1719 PIQPMYINTK 1728
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 PISDMHVNLK 14
PI M++N K
Sbjct: 1727 PIQPMYINTK 1736
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 1 SRHHP 5
+RHHP
Sbjct: 87 ARHHP 91
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 PISDMHVNLK 14
PI M++N K
Sbjct: 1718 PIQPMYINTK 1727
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 4 HPISD 8
HPISD
Sbjct: 131 HPISD 135
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SRHHPI 6
++HHP+
Sbjct: 926 NKHHPV 931
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 3 HHPISD 8
HHPI +
Sbjct: 193 HHPIDE 198
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 HHPISDMHVNL 13
HH I +MH L
Sbjct: 313 HHCIKEMHQEL 323
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRHHPIS 7
S HHP S
Sbjct: 78 SPHHPFS 84
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SRHHPISDMHVNL 13
S+HHP + N+
Sbjct: 226 SKHHPALENPSNI 238
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
38|SequenceR|195|186|SRHHPISDMH
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 4 HPISDMH 10
HP+ DMH
Sbjct: 978 HPLEDMH 984
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 5 PISDMH 10
P+SDMH
Sbjct: 371 PLSDMH 376
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 5 PISDMH 10
P+SDMH
Sbjct: 371 PLSDMH 376
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 1 SRHHPIS 7
SRHHP S
Sbjct: 236 SRHHPKS 242
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRHHPISDM 9
+RHH +SD+
Sbjct: 746 ARHHGVSDV 754
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRHHPISDM 9
+RHH +SD+
Sbjct: 746 ARHHGVSDV 754
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn
Query: 1 SRHHPIS 7
S+HHP S
Sbjct: 31 SQHHPSS 37
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 4 HPISDM 9
HPISD+
Sbjct: 135 HPISDI 140
>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 5 PISDMH 10
PISD+H
Sbjct: 196 PISDVH 201
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 SRHHPIS 7
S+H+P+S
Sbjct: 918 SKHYPVS 924
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 RHHPI 6
RHHP+
Sbjct: 504 RHHPV 508
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 SRHHPIS 7
+RH+P+S
Sbjct: 931 NRHYPVS 937
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 RHHP 5
RHHP
Sbjct: 6485 RHHP 6488
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 RHHP 5
RHHP
Sbjct: 6523 RHHP 6526
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 RHHP 5
RHHP
Sbjct: 6543 RHHP 6546
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 RHHP 5
RHHP
Sbjct: 6573 RHHP 6576
>sp|E3RDA_ADE02|PRE-EARLY 3 receptor internalization and|Human adenovirus C serotype 2
Query: 2 RHHP 5
RHHP
Sbjct: 74 RHHP 77
>sp|E310_ADE12|EARLY E3B 10.4 kDa protein|Human adenovirus A serotype 12
Query: 2 RHHP 5
RHHP
Sbjct: 73 RHHP 76
>sp|E310_ADE07|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 7
Query: 2 RHHP 5
RHHP
Sbjct: 74 RHHP 77
>sp|E310_ADE06|EARLY E3B 10.4 kDa protein|Human adenovirus C serotype 6
Query: 2 RHHP 5
RHHP
Sbjct: 74 RHHP 77
>sp|E310_ADE05|EARLY E3B 10.4 kDa protein|Human adenovirus C serotype 5
Query: 2 RHHP 5
RHHP
Sbjct: 74 RHHP 77
>sp|E310_ADE03|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 3
Query: 2 RHHP 5
RHHP
Sbjct: 74 RHHP 77
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 HHPISD 8
HHPI +
Sbjct: 193 HHPIDE 198
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 1 SRHHPISDMH 10
++H P+ ++H
Sbjct: 611 AQHQPLPELH 620
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 5 PISDMH 10
P+SD H
Sbjct: 601 PVSDFH 606
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 SRHHPIS 7
++H+PIS
Sbjct: 920 NKHYPIS 926
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 SRHHPIS 7
++H+PIS
Sbjct: 920 NKHYPIS 926
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 3 HHPISD 8
HHPI +
Sbjct: 193 HHPIDE 198
>sp|VL2_HPV04|MINOR capsid protein L2|Human papillomavirus 4
Query: 1 SRHHPISDM 9
+ H PISD+
Sbjct: 147 TSHDPISDV 155
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 1 SRHHPIS 7
SRHHP S
Sbjct: 45 SRHHPKS 51
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 RHHPIS 7
RH PIS
Sbjct: 236 RHSPIS 241
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 SRHHPIS 7
SRH PI+
Sbjct: 48 SRHTPIT 54
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 SRHHPIS 7
+RHHP +
Sbjct: 65 TRHHPAT 71
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SRHHPI 6
++HHP+
Sbjct: 926 NKHHPV 931
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 5 PISDMH 10
P+SD H
Sbjct: 541 PLSDFH 546
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PISDMH 10
P+SD H
Sbjct: 541 PLSDFH 546
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 RHHPIS 7
RHHP +
Sbjct: 10 RHHPYT 15
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 RHHPIS 7
RHHP +
Sbjct: 10 RHHPYT 15
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 SRHHPIS 7
SR++P+S
Sbjct: 946 SRYYPVS 952
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 HHPISDM 9
+HPI+D+
Sbjct: 421 YHPINDI 427
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRHHPIS 7
S HHP S
Sbjct: 78 SPHHPFS 84
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 SRHHP 5
+RHHP
Sbjct: 86 ARHHP 90
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 SRHHPIS 7
++H+P+S
Sbjct: 917 NKHYPVS 923
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SRHHP 5
S+HHP
Sbjct: 226 SKHHP 230
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 SRHHPIS 7
++H+P+S
Sbjct: 920 NKHYPVS 926
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 1 SRHHP 5
+RHHP
Sbjct: 87 ARHHP 91
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 SRHHPIS 7
++H+P+S
Sbjct: 928 NKHYPVS 934
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 SRHHPIS 7
++H+P+S
Sbjct: 919 NKHYPVS 925
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SRHHPIS 7
++H+P+S
Sbjct: 936 NKHYPVS 942
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 SRHHPISDMH 10
S H+P D H
Sbjct: 130 SLHNPYPDYH 139
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 SRHHPIS 7
++H+P+S
Sbjct: 938 NKHYPVS 944
THE END