SC6A3_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|LGVSCKSKSM

>sp|ARCH_METJA|PROTEIN archease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGVSCKSKSM 10
LGV K KS+
Sbjct: 11 LGVEAKGKSL 20


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGVSCKSK 8
LG+ CK K
Sbjct: 438 LGIDCKLK 445




2|SequenceR|15|6|VVSSMLGVSC

>sp|HIS8_METVS|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VSSMLGVSC 10
+SS +GV C
Sbjct: 79 ISSFIGVPC 87


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVSSMLGVS 9
V+S MLG++
Sbjct: 126 VISKMLGIN 134




3|SequenceR|20|11|EKAPAVVSSM

>sp|MTRC_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C7

Query: 2 KAPAVVSSM 10
K P +VSSM
Sbjct: 129 KVPIIVSSM 137


>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain ATCC

Query: 2 KAPAVVSSM 10
K P +VSSM
Sbjct: 136 KVPIIVSSM 144


>sp|MTRC_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain DSM

Query: 2 KAPAVVSSM 10
K P +VSSM
Sbjct: 129 KVPIIVSSM 137


>sp|MTRC_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus maripaludis (strain C5

Query: 2 KAPAVVSSM 10
K P +VSSM
Sbjct: 129 KVPIIVSSM 137




4|SequenceR|25|16|GVANPEKAPA

>sp|GFCR_METMP|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVANPEK 7
G+ANP+K
Sbjct: 168 GIANPKK 174


>sp|GFCR_METM7|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C7 /

Query: 1 GVANPEK 7
G+ANP+K
Sbjct: 168 GIANPKK 174


>sp|GFCR_METM6|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C6 /

Query: 1 GVANPEK 7
G+ANP+K
Sbjct: 168 GIANPKK 174


>sp|GFCR_METM5|TRANSCRIPTIONAL regulator GfcR|Methanococcus maripaludis (strain C5 /

Query: 1 GVANPEK 7
G+ANP+K
Sbjct: 168 GIANPKK 174


>sp|HFLX_THEKO|GTPASE HflX|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VANPEKAPA 10
V PEK PA
Sbjct: 371 VKEPEKVPA 379


>sp|ASSY_ARCFU|ARGININOSUCCINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ANPEKAP 9
A+PEKAP
Sbjct: 200 ASPEKAP 206


>sp|IF6_ARCFU|TRANSLATION initiation factor 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVANPE 6
G+ANPE
Sbjct: 106 GIANPE 111


>sp|Y1031_SACS2|UNCHARACTERIZED solute-binding protein SSO1031|Saccharolobus solfataricus (strain

Query: 1 GVANPEKAP 9
G+ANP P
Sbjct: 213 GIANPNTDP 221


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GVANPE 6
G+ANPE
Sbjct: 258 GIANPE 263


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 3 ANPEKA 8
ANPEKA
Sbjct: 90 ANPEKA 95




5|SequenceR|30|21|EVEKPGVANP

>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 1 EVEKPGVANP 10
E+ PG+ NP
Sbjct: 480 EIYTPGIENP 489


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 5 PGVANP 10
PGV NP
Sbjct: 224 PGVGNP 229


>sp|RL21_METTH|LARGE ribosomal subunit protein eL21|Methanothermobacter

Query: 1 EVEKPGVANP 10
+V++PG +NP
Sbjct: 17 KVKRPGRSNP 26


>sp|COBD_METTH|PROBABLE cobalamin biosynthesis protein CobD|Methanothermobacter

Query: 1 EVEKPGV 7
++EKPGV
Sbjct: 250 QLEKPGV 256


>sp|IF5A_AERPE|TRANSLATION initiation factor 5A|Aeropyrum pernix (strain ATCC 700893

Query: 1 EVEKPG 6
EVEKPG
Sbjct: 97 EVEKPG 102


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VEKPGVANP 10
VEKP +NP
Sbjct: 44 VEKPDESNP 52




6|SequenceR|35|26|KVLILEVEKP

>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLILEVEKP 10
+L+LEVE P
Sbjct: 237 MLLLEVEDP 245


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KVLILEVEKP 10
KVL L+++KP
Sbjct: 24 KVLTLKLDKP 33


>sp|DNAG_METHJ|DNA primase DnaG|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KVLILEVEKP 10
K L+LE E+P
Sbjct: 123 KALLLEFEEP 132


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 ILEVEKP 10
ILEV+KP
Sbjct: 385 ILEVDKP 391


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 KVLILEVEK 9
KVLI E+EK
Sbjct: 381 KVLIKEIEK 389


>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 5 LEVEKP 10
LEVEKP
Sbjct: 251 LEVEKP 256


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 LEVEKP 10
LEVEKP
Sbjct: 251 LEVEKP 256


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LEVEKP 10
LEVEKP
Sbjct: 252 LEVEKP 257


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 LEVEKP 10
LEVEKP
Sbjct: 253 LEVEKP 258


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 LEVEKP 10
LEVEKP
Sbjct: 253 LEVEKP 258


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 LEVEKP 10
LEVEKP
Sbjct: 252 LEVEKP 257




7|SequenceR|40|31|VGNQEKVLIL

>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VGNQEKVLIL 10
+ N EK+LIL
Sbjct: 75 INNPEKILIL 84


>sp|RL32_METAC|LARGE ribosomal subunit protein eL32|Methanosarcina acetivorans (strain

Query: 1 VGNQEKVLIL 10
+G Q+K LIL
Sbjct: 103 IGAQKKALIL 112


>sp|Y314_METJA|UNCHARACTERIZED protein MJ0314|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGNQEKVLI 9
+GN EK++I
Sbjct: 190 IGNNEKLMI 198


>sp|PCNA1_SULTO|DNA polymerase sliding clamp 1|Sulfurisphaera tokodaii (strain DSM

Query: 2 GNQEKVLI 9
GN+EKV++
Sbjct: 157 GNEEKVVV 164


>sp|PANE_PYRHO|2-DEHYDROPANTOATE 2-reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VGNQEKVLIL 10
+GN+EK++ L
Sbjct: 101 IGNEEKIMEL 110


>sp|RL21_METS5|LARGE ribosomal subunit protein eL21|Metallosphaera sedula (strain ATCC

Query: 1 VGNQEKVLIL 10
+G++EK+LI+
Sbjct: 80 LGDKEKILIV 89


>sp|RL21_METPE|LARGE ribosomal subunit protein eL21|Methanosphaerula palustris (strain

Query: 2 GNQEKVLI 9
GN EK++I
Sbjct: 79 GNMEKIVI 86




8|SequenceR|45|36|SSTLQVGNQE

>sp|PRIS_HALMA|DNA primase small subunit PriS|Haloarcula marismortui (strain ATCC

Query: 1 SSTLQVGNQ 9
S TL+ GNQ
Sbjct: 363 SFTLEAGNQ 371




9|SequenceR|50|41|PNTLTSSTLQ

>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei

Query: 2 NTLTSSTLQ 10
NT TS+TLQ
Sbjct: 47 NTETSATLQ 55




10|SequenceR|55|46|VPSQRPNTLT

>sp|HISX_SULTO|HISTIDINOL dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VPSQRPNTLT 10
+P QRPN T
Sbjct: 6 LPKQRPNDFT 15


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 1 VPSQRPN 7
VPS+RP+
Sbjct: 68 VPSERPD 74


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SQRPNTL 9
SQRP TL
Sbjct: 399 SQRPKTL 405


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 3 SQRPNTL 9
SQRP TL
Sbjct: 592 SQRPKTL 598


>sp|PDAD_METVS|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PSQRPNTLT 10
P Q PNT++
Sbjct: 10 PFQAPNTIS 18


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 QRPNTL 9
QRPNT+
Sbjct: 151 QRPNTI 156


>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 RPNTLT 10
RPNTLT
Sbjct: 97 RPNTLT 102


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VPSQRPN 7
VPS +PN
Sbjct: 36 VPSNKPN 42




11|SequenceR|60|51|RDQAEVPSQR

>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 DQAEVPSQR 10
D E+P+QR
Sbjct: 237 DVTEIPAQR 245




12|SequenceR|65|56|KGWTERDQAE

>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 1 KGWTER 6
KGWTE+
Sbjct: 139 KGWTEK 144


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 1 KGWTER 6
KGWTE+
Sbjct: 139 KGWTEK 144


>sp|PGP2_SACS2|PHOSPHOGLYCOLATE phosphatase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KGWTERDQAE 10
K W ERD+ +
Sbjct: 87 KSWFERDRKK 96


>sp|Y689_ARCFU|UNCHARACTERIZED protein AF_0689|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WTERDQAE 10
W E+D+AE
Sbjct: 94 WMEKDEAE 101


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 1 KGWTER 6
+GWTE+
Sbjct: 138 RGWTEK 143




13|SequenceR|70|61|LFDIKKGWTE

>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 1 LFDIKKGWTE 10
+ D++KGWT+
Sbjct: 262 IVDVQKGWTD 271


>sp|PSA_SACS2|PROTEASOME subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SACI7|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SACI6|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.4 /

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SACI4|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.14.25 /

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SACI3|PROTEASOME subunit alpha|Saccharolobus islandicus (strain M.16.27)

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SACI2|PROTEASOME subunit alpha|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SACI1|PROTEASOME subunit alpha|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 35 VKKGWT 40


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 4 IKKGWT 9
+KKGWT
Sbjct: 33 VKKGWT 38


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 2 FDIKKGW 8
FDI+K W
Sbjct: 170 FDIEKSW 176


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 4 IKKGWTE 10
I+KGW E
Sbjct: 545 IQKGWKE 551


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IKKGWTE 10
I+KGW E
Sbjct: 546 IQKGWKE 552


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FDIKKGW 8
FDI +GW
Sbjct: 247 FDIVEGW 253


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FDIKKGWTE 10
FD+ GW E
Sbjct: 345 FDLMHGWLE 353


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 IKKGWT 9
+K+GWT
Sbjct: 33 VKRGWT 38


>sp|Y2010_ARCFU|UNCHARACTERIZED protein AF_2010|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LFDIKKGW 8
L ++KKGW
Sbjct: 131 LLNLKKGW 138


>sp|FSR_METJA|COENZYME F420-dependent sulfite reductase|Methanocaldococcus jannaschii

Query: 2 FDIKKG 7
FDIKKG
Sbjct: 227 FDIKKG 232


>sp|CSG_METJA|S-LAYER protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDIKKGW 8
FD+KK W
Sbjct: 105 FDLKKDW 111


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 IKKGW 8
IKKGW
Sbjct: 303 IKKGW 307


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LFDIKKG 7
+FDI+KG
Sbjct: 552 IFDIQKG 558


>sp|PDAD_NITMS|PYRUVOYL-DEPENDENT arginine decarboxylase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FDIKKGWTE 10
FD+ K W E
Sbjct: 135 FDVDKNWDE 143


>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 2 FDIKKG 7
FD+KKG
Sbjct: 296 FDLKKG 301


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 LFDIKKGW 8
L D+K GW
Sbjct: 199 LEDLKSGW 206


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 IKKGWTE 10
IKKGW +
Sbjct: 112 IKKGWAK 118


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IKKGW 8
+KKGW
Sbjct: 299 VKKGW 303


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 LFDIKKGW 8
L D+K GW
Sbjct: 199 LEDLKSGW 206


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DIKKGWT 9
D K+GWT
Sbjct: 134 DPKRGWT 140


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 1 LFDIKKGWT 9
LF++KK +T
Sbjct: 192 LFELKKDYT 200




14|SequenceR|75|66|GIVSLLFDIK

>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 GIVSLLFDI 9
G VSL FDI
Sbjct: 56 GAVSLTFDI 64


>sp|NADC_ARCFU|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 GIVSLLFDI 9
G+V +LFD+
Sbjct: 30 GVVKILFDL 38




15|SequenceR|80|71|LDVAFGIVSL

>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LDVAFGIVSL 10
LDVAFG +++
Sbjct: 89 LDVAFGAITI 98


>sp|EF1B_HALMA|ELONGATION factor 1-beta|Haloarcula marismortui (strain ATCC 43049

Query: 2 DVAFGIVSL 10
DVAFG+V+L
Sbjct: 43 DVAFGLVAL 51


>sp|EF1B_HALLT|ELONGATION factor 1-beta|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DVAFGIVSL 10
DVAFG+V+L
Sbjct: 43 DVAFGLVAL 51


>sp|EF1B_HALWD|ELONGATION factor 1-beta|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DVAFGIVSL 10
DVAFG+V+L
Sbjct: 43 DVAFGLVAL 51


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DVAFGIVSL 10
DVAFG+++L
Sbjct: 43 DVAFGLIAL 51


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LDVAFGIVSL 10
LD+ FG++ L
Sbjct: 431 LDIPFGLIPL 440


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDVAFGIVSL 10
LD+ FG+ SL
Sbjct: 15 LDMKFGVSSL 24


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 2 DVAFGIVS 9
DVAFG+V+
Sbjct: 90 DVAFGLVN 97


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LDVAFGI 7
LDV FGI
Sbjct: 316 LDVCFGI 322


>sp|RPIA_METMA|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDVAFGIVS 9
LDV FG++
Sbjct: 183 LDVEFGVIK 191


>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 2 DVAFGIVS 9
D++FGI+S
Sbjct: 177 DLSFGIIS 184


>sp|RPIA_METAC|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDVAFGIV 8
LDV FG++
Sbjct: 183 LDVEFGVI 190


>sp|EF1B_PYRHO|ELONGATION factor 1-beta|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VAFGIVSL 10
+AFG+V+L
Sbjct: 46 IAFGLVAL 53


>sp|EF1B_PYRAB|ELONGATION factor 1-beta|Pyrococcus abyssi (strain GE5 /

Query: 3 VAFGIVSL 10
+AFG+V+L
Sbjct: 46 IAFGLVAL 53


>sp|EF1B_PYRFU|ELONGATION factor 1-beta|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VAFGIVSL 10
+AFG+V+L
Sbjct: 46 IAFGLVAL 53




16|SequenceR|85|76|RWVNALDVAF

>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RWVNALDVAF 10
RWV+ +DVAF
Sbjct: 83 RWVSGMDVAF 92


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RWVNALDVAF 10
RW + LDVAF
Sbjct: 84 RWKSPLDVAF 93


>sp|LEUC_SULAC|3-ISOPROPYLMALATE dehydratase large subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RWVNALDVAF 10
RW+N D+A
Sbjct: 168 RWINGKDIAL 177


>sp|CYSO_AERPE|PROTEIN CysO|Aeropyrum pernix (strain ATCC 700893

Query: 2 WVNALDVAF 10
W+N LD+++
Sbjct: 305 WINMLDISY 313


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RWVNALDVAF 10
+W+N DVA
Sbjct: 168 KWINGKDVAL 177


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 RWVNALDVAF 10
+W+N DVA
Sbjct: 168 KWINGKDVAL 177


>sp|Y241_ARCFU|S-ADENOSYL-L-METHIONINE-BINDING protein AF_0241|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RWVNALD 7
RW++ALD
Sbjct: 108 RWLDALD 114


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WVNALDV 8
WVN LD+
Sbjct: 11 WVNKLDI 17


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 3 VNALDVAF 10
VN+LDV+F
Sbjct: 315 VNSLDVSF 322


>sp|CDC6_DESA1|ORC1-TYPE DNA replication protein|Desulfurococcus amylolyticus (strain DSM

Query: 1 RWVNALD 7
R++NALD
Sbjct: 133 RYINALD 139


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RWVNALDVAF 10
RW NAL F
Sbjct: 163 RWDNALPEGF 172


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RWVNAL 6
RW NAL
Sbjct: 123 RWANAL 128




17|SequenceR|90|81|CLYPFRWVNA

>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 1 CLYPFRWV 8
CL+PF W+
Sbjct: 22 CLFPFIWM 29


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LYPFRW 7
LYP RW
Sbjct: 138 LYPMRW 143


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PFRWV 8
PFRWV
Sbjct: 357 PFRWV 361


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PFRWV 8
PFRWV
Sbjct: 357 PFRWV 361


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PFRWV 8
PFRWV
Sbjct: 380 PFRWV 384


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PFRWV 8
PFRWV
Sbjct: 380 PFRWV 384


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LYPFRWVNA 10
+Y FRWV +
Sbjct: 173 MYAFRWVKS 181


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 2 LYPFRW 7
LYPF W
Sbjct: 251 LYPFMW 256


>sp|COBS_METBF|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CLYPFRWV 8
C PF W+
Sbjct: 207 CFLPFGWI 214


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 4 PFRWVN 9
PFRW N
Sbjct: 373 PFRWGN 378


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 4 PFRWVN 9
PFRW N
Sbjct: 373 PFRWGN 378


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri (strain

Query: 4 PFRWV 8
PFRWV
Sbjct: 104 PFRWV 108


>sp|CAS2_METKA|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanopyrus kandleri (strain AV19 /

Query: 1 CLYPFRWVNA 10
CL RWV+A
Sbjct: 84 CLRVARWVDA 93


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 LYPFRWVNA 10
LYPFR V +
Sbjct: 151 LYPFRDVTS 159


>sp|TSGAD_HALVD|PUTATIVE ABC transporter glucose-binding protein|Haloferax volcanii (strain

Query: 3 YPFRWVNA 10
+ RWVNA
Sbjct: 227 FKVRWVNA 234


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YPFRWV 8
YP+ W+
Sbjct: 21 YPYSWI 26


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 3 YPFRWVN 9
Y F+WV+
Sbjct: 80 YSFKWVS 86


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LYPFRWVN 9
LYP WV+
Sbjct: 339 LYPKMWVS 346


>sp|BACS2_NATPH|SENSORY rhodopsin-2|Natronomonas pharaonis (Natronobacterium pharaonis)

Query: 2 LYPFRWV 8
+YPF W+
Sbjct: 173 IYPFIWL 179


>sp|Y1098_METJA|UNCHARACTERIZED protein MJ1098|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CLYPFRWVNA 10
CL+ ++W+ +
Sbjct: 241 CLHDYQWLKS 250


>sp|RNP4_ARCFU|RIBONUCLEASE P protein component 4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CLYPFR 6
CLYP++
Sbjct: 65 CLYPYK 70




18|SequenceR|95|86|GGNKYCLYPF

>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GNKYCLYPF 10
G+KYC+YP
Sbjct: 260 GDKYCVYPL 268


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GNKYCLYP 9
G++YC+YP
Sbjct: 267 GDEYCVYP 274


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GNKYCLYP 9
GNKY +YP
Sbjct: 266 GNKYKIYP 273


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 1 GGNKYC 6
GGN+YC
Sbjct: 428 GGNRYC 433


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GNKYCLYP 9
GNKY +YP
Sbjct: 265 GNKYRVYP 272


>sp|RNP4_ARCFU|RIBONUCLEASE P protein component 4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KYCLYPF 10
K CLYP+
Sbjct: 63 KKCLYPY 69


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GNKYCLYP 9
G+KY +YP
Sbjct: 266 GDKYVVYP 273


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GNKYCL 7
GNKYC+
Sbjct: 62 GNKYCI 67


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GGNKYC 6
GGNK+C
Sbjct: 431 GGNKHC 436


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NKYCLY 8
NKYC+Y
Sbjct: 281 NKYCIY 286


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NKYCLY 8
N+YCLY
Sbjct: 474 NQYCLY 479


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GNKYCLYP 9
G+KY L+P
Sbjct: 273 GDKYVLWP 280


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GNKYCLYP 9
G+KY L+P
Sbjct: 262 GDKYILWP 269


>sp|DCD_CALMQ|DCTP deaminase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GNKYCLYPF 10
GN+Y +Y F
Sbjct: 37 GNEYAIYAF 45


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NKYCLYP 9
+K CLYP
Sbjct: 520 DKACLYP 526


>sp|VAPC2_METJA|RIBONUCLEASE VapC2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KYCLYP 9
KYCL P
Sbjct: 109 KYCLLP 114


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NKYCLYP 9
+K CLYP
Sbjct: 402 DKACLYP 408


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GNKYCLYP 9
GN Y +YP
Sbjct: 490 GNYYIVYP 497


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 3 NKYCLYP 9
+K CLYP
Sbjct: 367 DKLCLYP 373


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GNKYCLYP 9
G+KY +YP
Sbjct: 274 GDKYRVYP 281


>sp|GFCR_METPE|TRANSCRIPTIONAL regulator GfcR|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 YCLYPF 10
YC +PF
Sbjct: 77 YCAHPF 82


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GNKYCLYPF 10
G KY +YP
Sbjct: 262 GTKYHVYPL 270


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GNKYCLYPF 10
G KY +YP
Sbjct: 262 GTKYHVYPL 270


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GNKYCLYPF 10
G KY +YP
Sbjct: 262 GTKYHVYPL 270


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GNKYCLYPF 10
G KY +YP
Sbjct: 262 GTKYHVYPL 270


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 5 YCLYPF 10
YC YPF
Sbjct: 167 YCPYPF 172


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GNKYCLYPF 10
G KY +YP
Sbjct: 268 GTKYRVYPL 276


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 GGNKYCLYPF 10
GG Y +Y F
Sbjct: 381 GGGMYLMYEF 390


>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 2 GNKYCL 7
G+KYC+
Sbjct: 58 GHKYCM 63


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KYCLYP 9
K CLYP
Sbjct: 366 KNCLYP 371


>sp|Y1621_METJA|UNCHARACTERIZED protein MJ1621|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGNKYCLYPF 10
G K CLY F
Sbjct: 37 GVEKICLYSF 46




19|SequenceR|100|91|VLFAGGGNKY

>sp|Y1225_METJA|UNCHARACTERIZED protein MJ1225|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLFAGGGNKY 10
V F GGG+KY
Sbjct: 58 VDFMGGGSKY 67


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 VLFAGGGNKY 10
+LF GGG+ Y
Sbjct: 322 ILFYGGGHFY 331


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 VLFAGGGNKY 10
VL GG+KY
Sbjct: 189 VLVTAGGSKY 198


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLFAGGG 7
VLF GGG
Sbjct: 51 VLFEGGG 57


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VLFAGGG 7
VLF GGG
Sbjct: 51 VLFEGGG 57


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VLFAGGGNK 9
+LF GGG++
Sbjct: 7 ILFDGGGDR 15


>sp|DAPB_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VLFAGGGNK 9
VLFAG G +
Sbjct: 223 VLFAGDGER 231


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLFAGGGNKY 10
++F GG KY
Sbjct: 182 IIFLAGGQKY 191


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 FAGGGNKY 10
+A GG KY
Sbjct: 262 YASGGRKY 269


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VLFAGGGNK 9
+LF GGG++
Sbjct: 7 ILFDGGGDR 15


>sp|APGM_PYRAR|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VLFAGGGNK 9
+LF GGG++
Sbjct: 7 ILFDGGGDR 15


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VLFA-GGGNKY 10
V +A GGG KY
Sbjct: 534 VFYAEGGGQKY 544


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 GGGNKY 10
GGG KY
Sbjct: 539 GGGQKY 544


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 5 GGGNKY 10
GGG KY
Sbjct: 539 GGGQKY 544


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 5 GGGNKY 10
GGG KY
Sbjct: 539 GGGQKY 544


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 5 GGGNKY 10
GGG KY
Sbjct: 539 GGGQKY 544


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 GGGNKY 10
GGG KY
Sbjct: 556 GGGQKY 561


>sp|APGM_PYRCJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum calidifontis (strain DSM

Query: 1 VLFAGGGNK 9
+LF GGG++
Sbjct: 7 ILFDGGGDR 15


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 2 LFAGGGNKY 10
+ GGG KY
Sbjct: 701 FYEGGGEKY 709


>sp|NNR_METKA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanopyrus kandleri (strain

Query: 1 VLFAGGGNKY 10
VL GG KY
Sbjct: 240 VLIIGGSRKY 249


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LFAGGGN 8
++AGGGN
Sbjct: 205 VWAGGGN 211




20|SequenceR|105|96|FLLYPVLFAG

>sp|Y198_METJA|UNCHARACTERIZED protein MJ0198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYPVLFA 9
LYPV+F
Sbjct: 264 LYPVIFG 270


>sp|TSR3_SULTO|16S rRNA aminocarboxypropyltransferase|Sulfurisphaera tokodaii

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACS2|16S rRNA aminocarboxypropyltransferase|Saccharolobus solfataricus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACI7|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACI6|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACI4|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACI3|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACI2|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90


>sp|TSR3_SACI1|16S rRNA aminocarboxypropyltransferase|Saccharolobus islandicus

Query: 5 PVLFAG 10
P+LFAG
Sbjct: 85 PILFAG 90




21|SequenceR|110|101|GAIVMFLLYP

>sp|Y1580_METJA|UNCHARACTERIZED protein MJ1580|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAIVMFLLYP 10
G +V+FL++P
Sbjct: 51 GFVVIFLVFP 60


>sp|IF6_METPE|TRANSLATION initiation factor 6|Methanosphaerula palustris (strain ATCC

Query: 1 GAIVMFLLYP 10
GAIV L YP
Sbjct: 67 GAIVSGLAYP 76




22|SequenceR|115|106|YFLPMGAIVM

>sp|HEM3_PYRCJ|PROBABLE porphobilinogen deaminase|Pyrobaculum calidifontis (strain DSM

Query: 1 YFLPMGAIV 9
Y LP GA+V
Sbjct: 114 YTLPKGAVV 122


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLPMGAIVM 10
LP+GA+++
Sbjct: 134 LLPLGALIL 142


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FLPMGAIV 9
F P+GA+V
Sbjct: 189 FCPIGAVV 196


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YFLPMGAIVM 10
Y+L GA+V+
Sbjct: 386 YYLEAGALVL 395


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 YFLPMGAIVM 10
Y+L GA+V+
Sbjct: 386 YYLEAGALVL 395


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 YFLPMGAIVM 10
Y+L GA+V+
Sbjct: 386 YYLEAGALVL 395


>sp|PDAD_METJA|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LPMGAIV 9
LPMGA+V
Sbjct: 67 LPMGALV 73


>sp|CDPAS_METJA|CDP-ARCHAEOL synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YFLPMGAIV 9
+FL +GAIV
Sbjct: 94 FFLSVGAIV 102




23|SequenceR|120|111|LALEMYFLPM

>sp|SOR_PYRFU|SUPEROXIDE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LEMYFLP 9
+E+YFLP
Sbjct: 52 IELYFLP 58


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LALEMYFLP 9
+A+EM FLP
Sbjct: 90 IAVEMGFLP 98




24|SequenceR|125|116|RNFQGLALEM

***** No hits found ******


25|SequenceR|130|121|GAAGERNFQG

>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAAGERNF 8
GA GER F
Sbjct: 413 GAVGERTF 420


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AAGERNFQG 10
+AGER F G
Sbjct: 175 SAGERGFGG 183


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 2 AAGERNFQG 10
+ G RNF+G
Sbjct: 374 STGSRNFKG 382


>sp|RL5_PICTO|LARGE ribosomal subunit protein uL5|Picrophilus torridus (strain ATCC

Query: 1 GAAGER 6
GAAGER
Sbjct: 24 GAAGER 29


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC 700922

Query: 3 AGERNFQ 9
AGERN Q
Sbjct: 132 AGERNLQ 138


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC 700922

Query: 3 AGERNFQ 9
AGERN Q
Sbjct: 126 AGERNLQ 132




26|SequenceR|135|126|CIKWVGAAGE

>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 CIKWVGAAGE 10
CI+WV AA E
Sbjct: 62 CIEWVKAALE 71


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IKWVGAAGE 10
+KW+ AGE
Sbjct: 167 LKWLAPAGE 175


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CIKWVG 6
C+KWV
Sbjct: 190 CLKWVA 195


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 4 WVGAAGE 10
WVG GE
Sbjct: 494 WVGMCGE 500


>sp|MTAD_PYRFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CIKWV 5
C+KWV
Sbjct: 188 CLKWV 192


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 1 CIKWVGA 7
CIK+VG+
Sbjct: 65 CIKFVGS 71


>sp|Y1550_METJA|UNCHARACTERIZED protein MJ1550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CIKWVGA 7
C+ WVG
Sbjct: 17 CVMWVGG 23


>sp|AHBC_METBF|FE-COPROPORPHYRIN III synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CIKWVGA 7
C+ W GA
Sbjct: 301 CVSWDGA 307




27|SequenceR|140|131|GKLIPCIKWV

>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GKLIPCIKW 9
G+L+PCI W
Sbjct: 264 GRLLPCIYW 272


>sp|SYTE_SACS2|THREONINE--TRNA ligase editing subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 GKLIPCI 7
G+++PCI
Sbjct: 201 GRILPCI 207


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 1 GKLIPCIKWV 10
G + CI+WV
Sbjct: 57 GGIAQCIEWV 66


>sp|RL14_PICTO|LARGE ribosomal subunit protein uL14|Picrophilus torridus (strain ATCC

Query: 1 GKLIPCI 7
G LIPC+
Sbjct: 15 GALIPCV 21


>sp|Y592_METVS|UPF0200 protein Mevan_0592|Methanococcus vannielii (strain ATCC 35089

Query: 3 LIPCIKWV 10
++PC+K++
Sbjct: 68 VVPCLKYI 75


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LIPCIK 8
L+PCIK
Sbjct: 271 LLPCIK 276


>sp|SYH_THEKO|HISTIDINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KLIPCIKW 9
+LIP ++W
Sbjct: 322 RLIPILEW 329


>sp|SYH_PYRAB|HISTIDINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KLIPCIKW 9
+LIP ++W
Sbjct: 320 RLIPILEW 327


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 1 GKLIPCI 7
GKL PC+
Sbjct: 261 GKLKPCL 267


>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 1 GKLIPCI 7
GKL PC+
Sbjct: 261 GKLKPCL 267


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKLIPCI 7
GKL PC+
Sbjct: 257 GKLKPCL 263


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKLIPCIKW 9
G L+P + W
Sbjct: 287 GDLVPVLNW 295


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKLIPCIKW 9
G L+P I W
Sbjct: 288 GGLLPLIAW 296


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKLIPCI 7
GKL PC+
Sbjct: 281 GKLRPCL 287


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 GKLIPCIKWV 10
GK+IP + +V
Sbjct: 191 GKIIPAVPFV 200


>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 2 KLIPCIKWV 10
K+IPC K V
Sbjct: 153 KIIPCDKAV 161


>sp|HIS3_METTP|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GKLIPCI 7
GKLIP I
Sbjct: 10 GKLIPAI 16




28|SequenceR|145|136|VTFGVGKLIP

>sp|APE2_AERPE|HOMING endonuclease I-ApeII|Aeropyrum pernix (strain ATCC 700893

Query: 3 FGVGKLIP 10
FG G+L+P
Sbjct: 57 FGCGRLMP 64


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTFGVGKLIP 10
+ G+GK+IP
Sbjct: 109 IAAGIGKIIP 118


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VTFGVGKLI 9
VTF GKLI
Sbjct: 56 VTFSHGKLI 64


>sp|TRPF_METTM|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 TFGVGKLIP 10
T G GK+IP
Sbjct: 136 TGGTGKIIP 144


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VTFGVGKL 8
+ +GVGKL
Sbjct: 308 IIYGVGKL 315


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FGVGKLI 9
FG+G+LI
Sbjct: 102 FGIGQLI 108


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VTFGVGKLIP 10
+ G+GK++P
Sbjct: 113 IAAGIGKIVP 122


>sp|Y1210_METJA|UNCHARACTERIZED protein MJ1210|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FGVGKL 8
FGVGKL
Sbjct: 126 FGVGKL 131




29|SequenceR|150|141|LSILIVTFGV

>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 ILIVTFG 9
IL+VTFG
Sbjct: 291 ILVVTFG 297




30|SequenceR|155|146|FFGVYLSILI

>sp|TMCA_THEPD|TRNA(MET) cytidine acetyltransferase TmcA|Thermofilum pendens (strain DSM

Query: 1 FFGVYL 6
FFG+Y+
Sbjct: 470 FFGIYI 475




31|SequenceR|160|151|IIVNYFFGVY

>sp|CBIN_ARCFU|COBALT transport protein CbiN|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIVNYFFGVY 10
+I+ YF G Y
Sbjct: 69 LIIGYFLGYY 78


>sp|RS19_METST|SMALL ribosomal subunit protein uS19|Methanosphaera stadtmanae (strain

Query: 2 IVNYFFGVY 10
+V Y FG+Y
Sbjct: 80 MVGYTFGIY 88


>sp|CBIN_METVS|COBALT transport protein CbiN|Methanococcus vannielii (strain ATCC 35089

Query: 1 IIVNYFFG 8
II+ YFFG
Sbjct: 80 IIIGYFFG 87


>sp|CBIN_METM5|COBALT transport protein CbiN|Methanococcus maripaludis (strain C5 /

Query: 1 IIVNYFFG 8
II+ YFFG
Sbjct: 80 IIIGYFFG 87


>sp|Y383_PYRFU|UNCHARACTERIZED protein PF0383|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IIVNYFF 7
II+NY F
Sbjct: 27 IIINYIF 33


>sp|Y806_METJA|UNCHARACTERIZED peptidase MJ0806|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VNYFFGVY 10
+NYF G Y
Sbjct: 36 INYFLGKY 43


>sp|Y1480_ARCFU|UNCHARACTERIZED protein AF_1480|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIVNYFFGV 9
II++YF GV
Sbjct: 8 IIIDYFRGV 16


>sp|CBIN_METMP|COBALT transport protein CbiN|Methanococcus maripaludis (strain DSM

Query: 1 IIVNYFFG 8
II+ YFFG
Sbjct: 80 IIIGYFFG 87


>sp|CBIN_METTM|COBALT transport protein CbiN|Methanothermobacter marburgensis (strain

Query: 1 IIVNYFFGVY 10
+I+ Y FG Y
Sbjct: 78 LIIGYVFGYY 87


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 2 IVNYFFGVY 10
+VN+ FG++
Sbjct: 3 MVNFIFGIH 11


>sp|Y941_METJA|TPR repeat-containing protein MJ0941|Methanocaldococcus jannaschii

Query: 1 IIVNYFFG 8
II+ YF+G
Sbjct: 5 IIILYFYG 12




32|SequenceR|165|156|HLAWAIIVNY

>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LAWAIIVNY 10
L+WAIIV Y
Sbjct: 284 LSWAIIVAY 292


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 HLAWAIIVN 9
+ AW +IVN
Sbjct: 465 YAAWNLIVN 473


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 3 AWAIIVNY 10
AW ++NY
Sbjct: 394 AWVQLINY 401


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLAWAIIVN 9
HL W ++ N
Sbjct: 42 HLLWEVVDN 50




33|SequenceR|170|161|SSFLYHLAWA

>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 5 YHLAWA 10
+H+AWA
Sbjct: 223 WHVAWA 228


>sp|Y1246_PYRAB|UNCHARACTERIZED protein PYRAB12460|Pyrococcus abyssi (strain GE5 /

Query: 2 SFLYHLAWA 10
+FL H++W+
Sbjct: 151 NFLAHVSWS 159


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SSFLYHLAW 9
++ +Y LAW
Sbjct: 650 ANLIYELAW 658




34|SequenceR|175|166|LETTFSSFLY

>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ETTFSSFL 9
+ TFSSFL
Sbjct: 106 QVTFSSFL 113


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LETTFSSFLY 10
+ET FSS +Y
Sbjct: 173 IETVFSSTVY 182


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LETTFSSFLY 10
LE TF +F Y
Sbjct: 448 LEATFFAFQY 457


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ETTFSSFLY 10
E+TF +LY
Sbjct: 191 ESTFRKYLY 199




35|SequenceR|180|171|CHIWPLETTF

>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HIWPLET 8
HIWP+E+
Sbjct: 81 HIWPMES 87


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HIWPLET 8
HIWP+E+
Sbjct: 81 HIWPMES 87


>sp|DADD_METM7|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C7 /

Query: 2 HIWPLET 8
HIWP+E+
Sbjct: 81 HIWPMES 87


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 2 HIWPLET 8
HIWP+E+
Sbjct: 81 HIWPMES 87


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 2 HIWPLET 8
HIWP+E+
Sbjct: 81 HIWPMES 87


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HIWPLE 7
HIWP E
Sbjct: 86 HIWPAE 91


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HIWPLE 7
HIWP E
Sbjct: 87 HIWPAE 92


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HIWPLE 7
HIWP E
Sbjct: 87 HIWPAE 92


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HIWPLE 7
HIWP E
Sbjct: 87 HIWPAE 92


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HIWPLE 7
HIWP E
Sbjct: 87 HIWPAE 92


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 CHIWPLE 7
C +WP E
Sbjct: 199 CRLWPAE 205


>sp|MTRA_METST|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosphaera stadtmanae (strain

Query: 4 WPLET 8
WPLET
Sbjct: 11 WPLET 15


>sp|MOAC_SACS2|PROBABLE cyclic pyranopterin monophosphate synthase|Saccharolobus

Query: 1 CHIWPLE 7
CH+ PLE
Sbjct: 68 CHLIPLE 74


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IWPLE 7
IWPLE
Sbjct: 81 IWPLE 85


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 IWPLE 7
IWPLE
Sbjct: 82 IWPLE 86


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 IWPLE 7
IWPLE
Sbjct: 90 IWPLE 94


>sp|COXX_THEPD|PROTOHEME IX farnesyltransferase|Thermofilum pendens (strain DSM 2475

Query: 2 HIWPLETTF 10
HIW L T +
Sbjct: 176 HIWTLSTYY 184


>sp|DADD_METJA|5'-DEOXYADENOSINE deaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HIWPLE 7
+IWP+E
Sbjct: 79 YIWPME 84


>sp|HIS1_METBF|ATP phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HIWPLETTF 10
H+ P+ET F
Sbjct: 169 HLKPIETVF 177


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 3 IWPLE 7
IWPLE
Sbjct: 97 IWPLE 101


>sp|PUR7_METTH|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CHIWPLET 8
C +W +ET
Sbjct: 201 CRLWDMET 208


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HIWPLETTF 10
+IWP+E
Sbjct: 88 NIWPMEANL 96


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 HIWPLETTF 10
+I+P+ET++
Sbjct: 1163 NIYPIETSY 1171


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IWPLET 8
+WPL+T
Sbjct: 260 LWPLDT 265


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 2 HIWPLE 7
+IWP+E
Sbjct: 87 YIWPVE 92


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 3 IWPLET 8
+WP+ET
Sbjct: 170 LWPIET 175


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IWPLE 7
IWPLE
Sbjct: 104 IWPLE 108


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IWPLET 8
+WP+ET
Sbjct: 172 LWPVET 177


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CHIWPLETTF 10
C++W L+ F
Sbjct: 523 CNVWLLDKRF 532


>sp|PUR7_PYRFU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CHIWPLET 8
C W +ET
Sbjct: 193 CRFWDVET 200


>sp|PUR7_METBU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CHIWPLET 8
C W +ET
Sbjct: 197 CRFWDVET 204




36|SequenceR|185|176|NWSNNCHIWP

>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 2 WSNNCHIWP 10
WS H+WP
Sbjct: 179 WSAKPHVWP 187


>sp|DADD_METTH|5'-DEOXYADENOSINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 WSNNCHIWP 10
W N+ HIWP
Sbjct: 82 WLND-HIWP 89


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NNCHIW 9
NN HIW
Sbjct: 1501 NNLHIW 1506


>sp|RL2_DESA1|LARGE ribosomal subunit protein uL2|Desulfurococcus amylolyticus (strain

Query: 2 WSNNCHIWP 10
WS +WP
Sbjct: 180 WSAKSRVWP 188


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 6 CHIW 9
CHIW
Sbjct: 9 CHIW 12


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 SNNCHIWP 10
S CH++P
Sbjct: 235 SATCHVYP 242


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NWSNNCHIWP 10
NW HI P
Sbjct: 383 NWIKGVHIMP 392


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WSNNCH 7
W+N CH
Sbjct: 122 WANWCH 127


>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WSNNCHIW 9
W N +IW
Sbjct: 192 WEENGYIW 199


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 2 WSNNCHIW 9
W N +IW
Sbjct: 192 WEENGYIW 199


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NWSNNCHI 8
NWS N H+
Sbjct: 125 NWSLNKHV 132


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 SNNCHIWP 10
S CH++P
Sbjct: 235 SATCHVFP 242


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 SNNCHIWP 10
S CH++P
Sbjct: 234 SATCHVFP 241


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 5 NCHIWP 10
N H WP
Sbjct: 97 NMHTWP 102


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 1 NWSNNCHIW 9
+W N HIW
Sbjct: 232 HWLNLYHIW 240


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 5 NCHIWP 10
NC+I+P
Sbjct: 419 NCYIYP 424


>sp|NADA_PYRAE|QUINOLINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 WSNNCHI 8
W CH+
Sbjct: 164 WDGECHV 170


>sp|GUAAB_METAR|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocella arvoryzae

Query: 4 NNCHIW 9
N CH W
Sbjct: 243 NRCHGW 248


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NWSNNCHIW 9
NW H W
Sbjct: 217 NWIKELHDW 225




37|SequenceR|190|181|SCNPSNWSNN

>sp|TDXH_HYPBU|PEROXIREDOXIN butylicus (strain DSM 5456

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 170 PANWPNN 176


>sp|TDXH_SACS2|PEROXIREDOXIN solfataricus (strain ATCC 35092

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 171 PANWPNN 177


>sp|TDXH_METMP|PEROXIREDOXIN maripaludis (strain DSM 14266

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 167 PANWPNN 173


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 167 PANWPNN 173


>sp|TDXH_STAMF|PEROXIREDOXIN marinus (strain ATCC 43588

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 170 PANWPNN 176


>sp|CARA_ARCFU|CARBAMOYL phosphate synthase small chain|Archaeoglobus fulgidus (strain

Query: 3 NPSNW 7
NPSNW
Sbjct: 86 NPSNW 90


>sp|TDXH2_SULTO|PEROXIREDOXIN 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 171 PANWPNN 177


>sp|RL24_NANEQ|LARGE ribosomal subunit protein uL24|Nanoarchaeum equitans (strain

Query: 3 NPSNWS 8
NPS+WS
Sbjct: 8 NPSDWS 13


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SCNPSNW 7
S NP NW
Sbjct: 797 SANPKNW 803


>sp|TDXH1_PICTO|PEROXIREDOXIN 1|Picrophilus torridus (strain ATCC 700027

Query: 4 PSNWSNN 10
P+NW NN
Sbjct: 170 PANWPNN 176


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 3 NPSNWSN 9
NP NW N
Sbjct: 161 NPWNWKN 167


Query: 1 SCNPSNW 7
SCNPS +
Sbjct: 366 SCNPSKF 372


>sp|KATG_METB6|CATALASE-PEROXIDASE boonei (strain DSM 21154

Query: 1 SCNPSNWSNN 10
+ P+ WSNN
Sbjct: 312 TSTPTKWSNN 321


>sp|DNAG_METJA|DNA primase DnaG|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CNPSN 6
CNPSN
Sbjct: 320 CNPSN 324


>sp|TDXH_METVS|PEROXIREDOXIN vannielii (strain ATCC 35089

Query: 4 PSNWSNN 10
P++W NN
Sbjct: 167 PADWPNN 173


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 4 PSNWSNN 10
P+NW +N
Sbjct: 165 PANWPDN 171


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 4 PSNWSNN 10
P++W NN
Sbjct: 172 PADWPNN 178


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 4 PSNWSNN 10
P+ WSNN
Sbjct: 315 PTKWSNN 321


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 4 PSNWSNN 10
P+NW +N
Sbjct: 165 PANWPDN 171


>sp|KATG_METAC|CATALASE-PEROXIDASE acetivorans (strain ATCC 35395

Query: 4 PSNWSNN 10
P+ WSNN
Sbjct: 320 PTKWSNN 326


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 1 SCNPSNW 7
SC PS W
Sbjct: 57 SCGPSLW 63


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 2 CNPSNWSNN 10
CNP S+N
Sbjct: 110 CNPKELSDN 118


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 2 CNPSNWSNN 10
CNP S+N
Sbjct: 110 CNPKELSDN 118


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PSNWSNN 10
P NW+N+
Sbjct: 87 PGNWTND 93


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CNPSNWSNN 10
CNP+N + N
Sbjct: 127 CNPNNPTGN 135


>sp|SRP19_METTP|SIGNAL recognition particle 19 kDa|Methanothrix thermoacetophila (strain

Query: 2 CNPSNW 7
C P NW
Sbjct: 57 CYPKNW 62


>sp|RIBB_METTH|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 2 CNPSNWSNN 10
C P +W N+
Sbjct: 58 CVPVSWENS 66


>sp|Y1439_METJA|UNCHARACTERIZED protein MJ1439|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 NWSNN 10
NWSNN
Sbjct: 203 NWSNN 207




38|SequenceR|195|186|GPHADSCNPS

>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 3 HADSCNP 9
HA+ CNP
Sbjct: 11 HANQCNP 17


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GPHADSCNPS 10
GP D C PS
Sbjct: 287 GPIVDRCKPS 296


>sp|Y2221_ARCFU|UNCHARACTERIZED protein AF_2221|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PHADSCNP 9
P D CNP
Sbjct: 178 PKGDQCNP 185


>sp|KHSE_METVS|HOMOSERINE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GPHADSCNPS 10
PHAD+ P+
Sbjct: 136 APHADNVAPA 145


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 1 GPHADSCNPS 10
GP D C PS
Sbjct: 286 GPIIDRCRPS 295


>sp|KHSE_METM6|HOMOSERINE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 GPHADSCNPS 10
PHAD+ P+
Sbjct: 135 APHADNVAPA 144


>sp|KHSE_METM5|HOMOSERINE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 GPHADSCNPS 10
PHAD+ P+
Sbjct: 135 APHADNVAPA 144


>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GPHADSCNPS 10
PHAD+ P+
Sbjct: 145 APHADNVAPA 154


>sp|KHSE_METMP|HOMOSERINE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GPHADSCNPS 10
PHAD+ P+
Sbjct: 135 APHADNVAPA 144


>sp|KHSE_METM7|HOMOSERINE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 GPHADSCNPS 10
PHAD+ P+
Sbjct: 135 APHADNVAPA 144


>sp|RL15E_METM7|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C7

Query: 5 DSCNPS 10
DSC+PS
Sbjct: 134 DSCHPS 139


>sp|RL15E_METM6|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain C6

Query: 5 DSCNPS 10
DSC+PS
Sbjct: 134 DSCHPS 139


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 PHADSCNPS 10
PH D +PS
Sbjct: 476 PHIDLADPS 484




39|SequenceR|200|191|DGSSDGPHAD

>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DGSSDGPH 8
DGS D PH
Sbjct: 249 DGSLDYPH 256


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DGSSDGPH 8
DGSS PH
Sbjct: 434 DGSSLDPH 441


>sp|CDRL_HALSA|TRANSCRIPTIONAL regulator CdrL|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGSSDGPHAD 10
DG +D HAD
Sbjct: 97 DGETDAEHAD 106


>sp|CDRL_HALS3|TRANSCRIPTIONAL regulator CdrL|Halobacterium salinarum (strain ATCC 29341

Query: 1 DGSSDGPHAD 10
DG +D HAD
Sbjct: 97 DGETDAEHAD 106


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain ATCC

Query: 4 SDGPHA 9
S+GPHA
Sbjct: 144 SEGPHA 149


>sp|PYRK_METKA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanopyrus kandleri

Query: 6 GPHAD 10
GPHAD
Sbjct: 134 GPHAD 138


>sp|THI4_HALWD|THIAMINE thiazole synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 SDGPHA 9
+DGPHA
Sbjct: 109 ADGPHA 114


>sp|LEUC2_METKA|3-ISOPROPYLMALATE dehydratase large subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 5 DGPHAD 10
DGPH D
Sbjct: 299 DGPHPD 304




40|SequenceR|205|196|NLGSSDGSSD

>sp|AROK_METS3|SHIKIMATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NLGSSDGSSD 10
N GS GSSD
Sbjct: 178 NFGSKSGSSD 187


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 4 SSDGSSD 10
SSDG+SD
Sbjct: 621 SSDGASD 627




41|SequenceR|210|201|TGFTDNLGSS

>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GFTDNLGS 9
GF DNLG+
Sbjct: 265 GFADNLGA 272


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 1 TGFTDN 6
TGFTDN
Sbjct: 262 TGFTDN 267


>sp|Y1546_ARCFU|UNCHARACTERIZED MscS family protein AF_1546|Archaeoglobus fulgidus (strain ATCC

Query: 3 FTDNLGSS 10
F DNLG S
Sbjct: 213 FVDNLGDS 220


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GFTDNLGS 9
GF +NLG+
Sbjct: 265 GFAENLGA 272


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 GFTDNLGSS 10
GFTD L S+
Sbjct: 693 GFTDTLRSA 701


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 TGFTDNLGSS 10
TG+TD G S
Sbjct: 251 TGYTDESGFS 260


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GFTDNLGSS 10
G+T+ LGSS
Sbjct: 224 GYTEVLGSS 232


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 1 TGFTDN 6
TGFT+N
Sbjct: 262 TGFTEN 267


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 5 DNLGSS 10
DNLGSS
Sbjct: 4 DNLGSS 9




42|SequenceR|215|206|EAAPTTGFTD

>sp|RS14Z_AERPE|SMALL ribosomal subunit protein uS14|Aeropyrum pernix (strain ATCC

Query: 1 EAAPTTGF 8
E APT GF
Sbjct: 43 EIAPTLGF 50


>sp|DAPB_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 TTGFTD 10
TTGFTD
Sbjct: 92 TTGFTD 97


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 3 APTTGF 8
APTTGF
Sbjct: 163 APTTGF 168


>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 TTGFTD 10
TTGFTD
Sbjct: 103 TTGFTD 108




43|SequenceR|220|211|GREFYEAAPT

>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 GREFYEAAP 9
REFYE P
Sbjct: 245 AREFYEENP 253


>sp|TAL_METVS|PROBABLE transaldolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GREFYE 6
GR+FYE
Sbjct: 36 GRDFYE 41


>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GREFYE 6
GR+FYE
Sbjct: 36 GRDFYE 41


>sp|TAL_METM7|PROBABLE transaldolase|Methanococcus maripaludis (strain C7 /

Query: 1 GREFYE 6
GR+FYE
Sbjct: 36 GRDFYE 41


>sp|TAL_METM6|PROBABLE transaldolase|Methanococcus maripaludis (strain C6 /

Query: 1 GREFYE 6
GR+FYE
Sbjct: 36 GRDFYE 41


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 1 GREFYE 6
GR+FYE
Sbjct: 36 GRDFYE 41


>sp|TAL_METJA|PROBABLE transaldolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GREFYE 6
GR+FYE
Sbjct: 36 GRDFYE 41


>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain

Query: 3 EFYEAAP 9
EFY+A P
Sbjct: 57 EFYQATP 63


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GREFYEAAPT 10
GRE+ + APT
Sbjct: 190 GREYRQRAPT 199


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 REFYEA 7
REFYEA
Sbjct: 2100 REFYEA 2105


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 GREFYEAAPT 10
G + Y+A PT
Sbjct: 49 GSDLYDAVPT 58


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 REFYEA 7
REFYEA
Sbjct: 1181 REFYEA 1186


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 REFYEA 7
REFYEA
Sbjct: 1206 REFYEA 1211


>sp|CCA_HALLT|CCA-ADDING enzyme|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 REFYEAAP 9
REFYE P
Sbjct: 455 REFYEPHP 462


>sp|NDK_METJA|NUCLEOSIDE diphosphate kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GREFYE 6
G+EFYE
Sbjct: 55 GKEFYE 60


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 REFYEAA 8
REFYE A
Sbjct: 172 REFYERA 178


>sp|NDK_METMP|NUCLEOSIDE diphosphate kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GREFYE 6
G+EFYE
Sbjct: 54 GKEFYE 59




44|SequenceR|225|216|HLHLVGREFY

>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HLHLVGREF 9
HLH VG EF
Sbjct: 288 HLHDVGHEF 296


>sp|RFCL_METST|REPLICATION factor C large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 3 HLVGREFY 10
HLVG+E++
Sbjct: 56 HLVGKEYF 63


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLVGREF 9
HL+G+EF
Sbjct: 235 HLIGKEF 241


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLHLVGREF 9
H H +GREF
Sbjct: 578 HPHRLGREF 586


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HLHLVGREF 9
H H +GR+F
Sbjct: 79 HFHNLGRKF 87


>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 3 HLVGREF 9
H++G+EF
Sbjct: 56 HIIGKEF 62


>sp|Y402_ARCFU|UNCHARACTERIZED protein AF_0402|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLHLVGREFY 10
+L +G+EFY
Sbjct: 34 YLRKIGKEFY 43


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 HLHLVGREFY 10
+LH + RE+Y
Sbjct: 202 YLHGLSREYY 211


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LVGREF 9
LVGREF
Sbjct: 14 LVGREF 19


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 HLHLVGREFY 10
H+H G FY
Sbjct: 432 HIHTYGTGFY 441


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 2 LHLVGRE 8
LH+ GRE
Sbjct: 246 LHIAGRE 252


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLVGREFY 10
+LVG+ FY
Sbjct: 157 NLVGKSFY 164


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 1 HLHLVGR 7
HLH GR
Sbjct: 67 HLHAAGR 73


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 HLHLVGRE 8
HLH +GR+
Sbjct: 125 HLHGLGRD 132


>sp|TRUA_PYRNV|TRNA pseudouridine synthase A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LHLVGREF 9
LH VGR F
Sbjct: 152 LHFVGRGF 159


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HLHLVGREF 9
++H VGR F
Sbjct: 151 YMHFVGRGF 159




45|SequenceR|230|221|IGHSQHLHLV

>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GHSQHLHLV 10
G SQ++HL+
Sbjct: 66 GRSQYMHLI 74


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 2 GHSQHLHLV 10
GHS HL+ +
Sbjct: 266 GHSHHLYAI 274


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 GHSQHL--HLV 10
GHS+HL HL+
Sbjct: 119 GHSRHLVHHLI 129


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GHSQHLHLV 10
GHS HL +
Sbjct: 270 GHSHHLRAI 278


>sp|HIS3_HALWD|PHOSPHORIBOSYL-AMP cyclohydrolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GHSQHL 7
GH+QH+
Sbjct: 75 GHTQHI 80


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 3 HSQHLHLV 10
H Q++HL+
Sbjct: 8 HGQYVHLI 15


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 2 GHSQHL 7
GHS HL
Sbjct: 50 GHSDHL 55




46|SequenceR|235|226|PGLDDIGHSQ

>sp|EF1A_METAR|ELONGATION factor 1-alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 PGLDDIGHS 9
PG+D +GH+
Sbjct: 261 PGIDGVGHA 269


>sp|TAL_METJA|PROBABLE transaldolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LDDIGH 8
LDDIGH
Sbjct: 133 LDDIGH 138


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM

Query: 1 PGLDDI 6
PGLDDI
Sbjct: 2 PGLDDI 7


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 1 PGLDDIGH 8
PG+DDI H
Sbjct: 10 PGMDDILH 17


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LDDIGHS 9
LDD GHS
Sbjct: 28 LDDTGHS 34


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 PGLDDI 6
PGLDD+
Sbjct: 323 PGLDDV 328


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PGLDDI 6
PGLDD+
Sbjct: 217 PGLDDV 222


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 1 PGLDDI 6
PGLDD+
Sbjct: 266 PGLDDL 271


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 1 PGLDDIGHSQ 10
PGL +IG Q
Sbjct: 109 PGLGNIGPEQ 118


>sp|VORB_METTH|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter thermautotrophicus

Query: 1 PGLDDIGHSQ 10
PGL +IG Q
Sbjct: 109 PGLGNIGPEQ 118


>sp|Y1505_AERPE|UPF0273 protein APE_1505.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PGLDDI 6
PG+DDI
Sbjct: 10 PGMDDI 15


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGLDDIGH 8
PG+D+I H
Sbjct: 9 PGMDEILH 16


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGLDDIGH 8
PG+D+I H
Sbjct: 10 PGMDEILH 17


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGLDDIGH 8
PG+D+I H
Sbjct: 10 PGMDEILH 17


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 3 LDDIGHSQ 10
+DD+GHS+
Sbjct: 283 VDDLGHSE 290


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 3 LDDIGHSQ 10
+DD+GHS+
Sbjct: 283 VDDLGHSE 290


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GLDDIGH 8
G+D++GH
Sbjct: 281 GIDEVGH 287


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 PGLDDIG 7
P LDD+G
Sbjct: 36 PSLDDMG 42


>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 2 GLDDIG 7
GLDD+G
Sbjct: 448 GLDDLG 453


>sp|RL7A_NATPD|LARGE ribosomal subunit protein eL8|Natronomonas pharaonis (strain ATCC

Query: 4 DDIGHS 9
DDIGH+
Sbjct: 82 DDIGHA 87


>sp|Y284_PYRHO|UPF0273 protein PH0284|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGLDDIGH 8
PG+D+I H
Sbjct: 10 PGVDEILH 17


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 PGLDDI 6
PG+DD+
Sbjct: 313 PGIDDV 318




47|SequenceR|240|231|LQWRPPGLDD

>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LQWRPPG 7
L W+PPG
Sbjct: 70 LNWQPPG 76


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LQWRPPG 7
L W+PPG
Sbjct: 70 LNWQPPG 76


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LQWRPPG 7
L W+PPG
Sbjct: 70 LNWQPPG 76


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LQWRPPG 7
L W+PPG
Sbjct: 70 LNWQPPG 76


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LQWRPPG 7
L W+PPG
Sbjct: 70 LNWQPPG 76


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LQWRPPG 7
L W+PPG
Sbjct: 70 LNWQPPG 76


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 3 WRPPGLDD 10
W PP LDD
Sbjct: 552 WLPPPLDD 559


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 LQWRPPGLDD 10
L+ RPP LDD
Sbjct: 183 LRERPPSLDD 192


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQWRPPGLDD 10
++WRPP D
Sbjct: 302 MRWRPPADAD 311


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 LQWRPPGLDD 10
++WRPP D
Sbjct: 302 MRWRPPADAD 311


>sp|NUCS_SULTO|ENDONUCLEASE NucS|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQWRPPG 7
+ W+PPG
Sbjct: 70 INWQPPG 76


>sp|NUCS_PYRHO|ENDONUCLEASE NucS|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQWRPPG 7
+ W+PPG
Sbjct: 73 VNWQPPG 79


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 1 LQWRPP 6
L WRPP
Sbjct: 219 LGWRPP 224


>sp|NUCS_PYRFU|ENDONUCLEASE NucS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LQWRPPG 7
+ W+PPG
Sbjct: 75 VNWQPPG 81


>sp|NUCS_PYRAB|ENDONUCLEASE NucS|Pyrococcus abyssi (strain GE5 /

Query: 1 LQWRPPG 7
+ W+PPG
Sbjct: 73 VNWQPPG 79


>sp|NUCS_SULAC|ENDONUCLEASE NucS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQWRPPG 7
+ W+PPG
Sbjct: 69 VNWQPPG 75


>sp|NUCS_THEKO|ENDONUCLEASE NucS|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LQWRPPG 7
+ W+PPG
Sbjct: 75 VNWQPPG 81


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 1 LQWRPPGL 8
LQW P G+
Sbjct: 251 LQWVPAGM 258


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LQWRPPGLD 9
L W PP D
Sbjct: 445 LTWTPPAQD 453


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 3 WRPPGLDD 10
W+P GL D
Sbjct: 496 WKPDGLKD 503


>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 3 WRPP 6
WRPP
Sbjct: 523 WRPP 526


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 LQWRPP 6
L+W PP
Sbjct: 245 LEWHPP 250


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 2 QWRPPGLDD 10
+WRPP + D
Sbjct: 201 EWRPPVIID 209


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WRPPG 7
W PPG
Sbjct: 76 WNPPG 80


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WRPPGLD 9
WR PG D
Sbjct: 81 WRQPGFD 87


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 2 QWRPPGLDD 10
++RP LDD
Sbjct: 8 KYRPQNLDD 16


>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LQWRPPGL 8
L W PPG+
Sbjct: 60 LLWGPPGI 67


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQWRPPGLDD 10
++WRP G D
Sbjct: 157 IEWRPRGHAD 166


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QWRPPGLDD 10
+WR G+DD
Sbjct: 3 KWRFLGIDD 11


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 WRPP 6
WRPP
Sbjct: 519 WRPP 522


>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WRPPGLDD 10
W+ P +DD
Sbjct: 38 WQDPSIDD 45


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 3 WRPPGLDD 10
W+ P +DD
Sbjct: 39 WQDPNIDD 46


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 2 QWRPPGLDD 10
++ PGLDD
Sbjct: 262 RYATPGLDD 270


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WRPPGLD 9
WR PG D
Sbjct: 81 WRQPGYD 87


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 LQWRPPGLD 9
L+W PP D
Sbjct: 225 LEWYPPERD 233


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 WRPPGLD 9
WR PG D
Sbjct: 81 WRQPGYD 87


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQWRPPGLDD 10
++W PP + +
Sbjct: 494 VEWEPPEISE 503


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LQWRPP 6
+ WRPP
Sbjct: 322 MGWRPP 327


>sp|YAC1_METSH|UNCHARACTERIZED 16.9 kDa protein in|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 LQWRPP 6
L+W+PP
Sbjct: 106 LEWKPP 111


>sp|RL2_NANEQ|LARGE ribosomal subunit protein uL2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QWRPPG 7
+W PPG
Sbjct: 218 KWAPPG 223


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 QWRPPGLD 9
+W+PP D
Sbjct: 459 RWKPPERD 466


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LQWRPP 6
+QW PP
Sbjct: 522 VQWAPP 527


>sp|RS4_IGNH4|SMALL ribosomal subunit protein uS4|Ignicoccus hospitalis (strain

Query: 2 QWRPPG 7
+W PPG
Sbjct: 10 KWSPPG 15


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 LQWRPP 6
++W+PP
Sbjct: 526 IEWQPP 531


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LQWRPPGL 8
L W PPG+
Sbjct: 47 LLWGPPGV 54


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QWRPPGLDD 10
+W+PP L +
Sbjct: 356 RWQPPPLPE 364


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 QWRPPGLDD 10
WRPP + D
Sbjct: 213 SWRPPVMVD 221




48|SequenceR|245|236|VLCATLQWRP

>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VLCATLQW 8
++CATL W
Sbjct: 174 LVCATLGW 181




49|SequenceR|250|241|LVIVLVLCAT

***** No hits found ******


50|SequenceR|255|246|LSFYLLVIVL

***** No hits found ******


51|SequenceR|260|251|KVGKWLSFYL

>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KVGKWLSF 8
KVGKW++F
Sbjct: 44 KVGKWINF 51


>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 1 KVGKWLSF 8
KVGKW++
Sbjct: 46 KVGKWMAL 53


>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 3 GKWLSFYL 10
G WL++Y+
Sbjct: 286 GNWLNYYI 293


>sp|Y612_METJA|PROBABLE arogenate/prephenate dehydrogenase|Methanocaldococcus jannaschii

Query: 2 VGKWLSFYL 10
+GKW + YL
Sbjct: 17 LGKWFARYL 25


>sp|UPPP_METKA|UNDECAPRENYL-DIPHOSPHATASE kandleri (strain AV19 /

Query: 5 WLSFYL 10
WLSFYL
Sbjct: 188 WLSFYL 193


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 1 KVGKWLSF 8
K+G W++F
Sbjct: 203 KIGNWITF 210


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 VGKWLSFYL 10
VG+W +++L
Sbjct: 225 VGRWAAYWL 233


>sp|Y555_METJA|PUTATIVE aminopeptidase MJ0555|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VGKWLSF 8
+G W+SF
Sbjct: 151 IGTWVSF 157


>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVGKWLSFY 9
K KW SF+
Sbjct: 446 KTKKWRSFF 454


>sp|Y054_ARCFU|UNCHARACTERIZED protein AF_0054|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVGKWLSFYL 10
K+GK + FY+
Sbjct: 16 KIGKTVRFYV 25


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KVGKWLSFYL 10
+VG L+FYL
Sbjct: 442 RVGVGLAFYL 451


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 VGKWLSFYL 10
V +W+ F+L
Sbjct: 812 VDRWIGFHL 820


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GKWLSFY 9
G+W+ FY
Sbjct: 420 GEWILFY 426


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 2 VGKWLSF 8
VG WLS+
Sbjct: 561 VGNWLSY 567


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GKWLSFYL 10
G+W +YL
Sbjct: 193 GRWREYYL 200


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 4 KWLSF 8
KWLSF
Sbjct: 334 KWLSF 338


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VGKWLSF 8
VG WLS+
Sbjct: 555 VGNWLSY 561




52|SequenceR|265|256|VKGSTKVGKW

>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 2 KGSTKVGKW 10
KG TK G W
Sbjct: 64 KGDTKPGWW 72


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VKGSTKVG 8
VKGS+K G
Sbjct: 376 VKGSSKTG 383


>sp|FLAG_METVO|PUTATIVE flagella-related protein G|Methanococcus voltae

Query: 1 VKGSTKVGKW 10
V GS+KVGK
Sbjct: 112 VLGSSKVGKL 121


>sp|Y1053_METJA|UNCHARACTERIZED protein MJ1053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKGSTKVGK 9
+KG TK GK
Sbjct: 80 LKGETKAGK 88


>sp|RNP1_DESA1|RIBONUCLEASE P protein component 1|Desulfurococcus amylolyticus (strain DSM

Query: 1 VKGSTKVGK 9
+KGST +G+
Sbjct: 74 IKGSTIIGR 82




53|SequenceR|270|261|ATIWVVKGST

>sp|Y100_ARCFU|UPF0175 protein AF_0100|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IWVVKG 8
IW+VKG
Sbjct: 4 IWIVKG 9


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IWVVKGS 9
+WVVKG+
Sbjct: 383 VWVVKGT 389


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IWVVKGST 10
+W+ +GST
Sbjct: 503 LWIAEGST 510


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 WVVKGS 9
WVV+GS
Sbjct: 69 WVVRGS 74


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 ATIWVVKGST 10
AT+W ++G++
Sbjct: 31 ATVWDIEGNS 40


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 WVVKGS 9
WVV+GS
Sbjct: 69 WVVRGS 74


>sp|TMBL2_THEKO|DNA-BINDING HTH-type transcriptional repressor TrmBL2|Thermococcus kodakarensis

Query: 3 IWVVKG 8
+WVV+G
Sbjct: 126 VWVVRG 131


>sp|TMBL2_PYRFU|PUTATIVE HTH-type transcriptional regulator TrmBL2|Pyrococcus furiosus

Query: 3 IWVVKG 8
+WVV+G
Sbjct: 126 VWVVRG 131


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 WVVKGS 9
WV++GS
Sbjct: 69 WVIRGS 74


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 ATIWVVKGST 10
ATI VKG T
Sbjct: 152 ATIGTVKGKT 161


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 1 ATIWVVKGST 10
ATI VKG T
Sbjct: 152 ATIGTVKGKT 161


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 ATIWVVKGST 10
ATI VKG T
Sbjct: 152 ATIGTVKGKT 161


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 1 ATIWVVKGST 10
ATI VKG T
Sbjct: 152 ATIGTVKGKT 161


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 3 IWVVKGS 9
+WVV+G+
Sbjct: 489 VWVVRGT 495


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 WVVKG 8
WVVKG
Sbjct: 53 WVVKG 57




54|SequenceR|275|266|VYPMTATIWV

>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 2 YPMTATIW 9
YP T +W
Sbjct: 114 YPQTMQVW 121


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 YPMTATIWV 10
YP + TIW+
Sbjct: 366 YPGSKTIWL 374


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VYPMTAT 7
VYP+TAT
Sbjct: 506 VYPVTAT 512


>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VYPMTATI 8
+YP TAT+
Sbjct: 396 LYPKTATV 403


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VYPMTATIWV 10
+YP TAT ++
Sbjct: 1181 IYPATATKYL 1190


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 YPMTATIW 9
YPM T W
Sbjct: 114 YPMKRTSW 121


>sp|Y1621_METJA|UNCHARACTERIZED protein MJ1621|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYPMTATIW 9
++PM++ +W
Sbjct: 18 LFPMSSELW 26




55|SequenceR|280|271|LATLVVYPMT

***** No hits found ******


56|SequenceR|285|276|VGRLLLATLV

>sp|RS3A_METMJ|SMALL ribosomal subunit protein eS1|Methanoculleus marisnigri (strain

Query: 1 VGRLLLATL 9
VGR++ ATL
Sbjct: 45 VGRIMTATL 53


>sp|RS4_METTP|SMALL ribosomal subunit protein uS4|Methanothrix thermoacetophila

Query: 1 VGRLLLAT 8
VGR+LLA+
Sbjct: 54 VGRMLLAS 61




57|SequenceR|290|281|AGPLTVGRLL

>sp|SYR_METAR|ARGININE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GPLTVGR 8
GPL VGR
Sbjct: 123 GPLHVGR 129


>sp|TRM1_METBU|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcoides burtonii

Query: 1 AGPLTVGRL 9
AGPL +G+L
Sbjct: 281 AGPLWLGQL 289


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 2 GPLTVGRLL 10
GP+TV LL
Sbjct: 264 GPMTVAMLL 272


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 GPLTVGRL 9
GP+TV RL
Sbjct: 38 GPITVQRL 45


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 AGPLTVGR 8
+GP+T+G+
Sbjct: 15 SGPITIGQ 22


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 AGPLTVGR 8
+GP+T+G+
Sbjct: 15 SGPITIGQ 22


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 AGPLTVGR 8
+GP+T+G+
Sbjct: 15 SGPITIGQ 22


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 2 GPLTVGR 8
GPL +GR
Sbjct: 233 GPLLIGR 239


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GPLTVGRLL 10
GPLTV LL
Sbjct: 256 GPLTVAMLL 264


>sp|MRAY_METTH|PUTATIVE phospho-N-acetylmuramoyl-pentapeptide-

Query: 2 GPLTVGRLL 10
GPL VG+L+
Sbjct: 108 GPLEVGQLV 116


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GPLTVGRLL 10
GPLTV L+
Sbjct: 268 GPLTVAMLM 276


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPLTVGRLL 10
GPLT+ LL
Sbjct: 271 GPLTIAMLL 279


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 2 GPLTVGRLL 10
GPLTV L+
Sbjct: 268 GPLTVAMLM 276


>sp|FOLD_CENSY|BIFUNCTIONAL protein FolD|Cenarchaeum symbiosum (strain A)

Query: 2 GPLTVGRLL 10
GP+TV LL
Sbjct: 259 GPMTVAMLL 267




58|SequenceR|295|286|RIGDIAGPLT

>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 1 RIGDIAGPLT 10
+IG++A PLT
Sbjct: 388 KIGELADPLT 397


>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 1 RIGDIAGPL 9
R GDI GPL
Sbjct: 273 RAGDILGPL 281


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GDIAGP 8
GD+AGP
Sbjct: 449 GDVAGP 454


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 RIGDIAGP 8
R GD++GP
Sbjct: 164 RRGDLSGP 171


>sp|IORB_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorB|Archaeoglobus fulgidus (strain ATCC

Query: 1 RIGDIAGPL 9
RIGD+ PL
Sbjct: 53 RIGDVRAPL 61


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 4 DIAGPL 9
D+AGPL
Sbjct: 273 DVAGPL 278


>sp|EF1A_METLZ|ELONGATION factor 1-alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RIGDIAGPL 9
R GD+ GP+
Sbjct: 300 RRGDVCGPI 308


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGDIAGP 8
+GDI GP
Sbjct: 372 LGDIRGP 378


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 3 GDIAGPL 9
G++AGPL
Sbjct: 55 GEVAGPL 61


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 4 DIAGPL 9
DIAGPL
Sbjct: 70 DIAGPL 75


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 4 DIAGPL 9
D+AGPL
Sbjct: 269 DVAGPL 274


>sp|ARLY_METTP|ARGININOSUCCINATE lyase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RIGDIAGPL 9
R+GDI+G +
Sbjct: 7 RLGDISGEV 15


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RIGDIAGP 8
R GD+ GP
Sbjct: 300 RRGDVCGP 307


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RIGDIAGP 8
R GD+ GP
Sbjct: 300 RRGDVCGP 307


>sp|EF1A_METBU|ELONGATION factor 1-alpha|Methanococcoides burtonii (strain DSM 6242

Query: 1 RIGDIAGP 8
R GD+ GP
Sbjct: 299 RRGDVCGP 306


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 1 RIGDIAGP 8
R GD+ GP
Sbjct: 299 RRGDVCGP 306


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 RIGDIAGP 8
R GD+ GP
Sbjct: 300 RRGDVCGP 307




59|SequenceR|300|291|VSLYARIGDI

>sp|RS17_METJA|SMALL ribosomal subunit protein uS17|Methanocaldococcus jannaschii

Query: 3 LYARIGDI 10
++AR+GDI
Sbjct: 79 IHARVGDI 86


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 3 LYARIGDI 10
L+AR+GD+
Sbjct: 78 LHARVGDM 85


>sp|HPPA2_METAC|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina acetivorans

Query: 1 VSLYARIG 8
+SL+AR+G
Sbjct: 165 ISLFARVG 172


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 VSLYARIGDI 10
+SLY ++GD+
Sbjct: 1547 MSLYKQLGDM 1556


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VSLYARIGDI 10
+SLY ++GD+
Sbjct: 1228 MSLYKQLGDM 1237


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 VSLYARIGDI 10
+SLY ++GD+
Sbjct: 1250 MSLYKQLGDM 1259


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSLYARIGDI 10
+SLY ++GD+
Sbjct: 1063 MSLYKQLGDM 1072


>sp|CDPAS_SACS2|CDP-ARCHAEOL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|CDPAS_SACI7|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|CDPAS_SACI6|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|CDPAS_SACI4|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|CDPAS_SACI3|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|CDPAS_SACI2|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|CDPAS_SACI1|CDP-ARCHAEOL synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SLYARIGDI 10
SL+A IGD+
Sbjct: 85 SLFAMIGDM 93


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SLYARIGDI 10
+ Y R+GD+
Sbjct: 521 TTYTRVGDV 529


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSLYARIG 8
+SLYA+ G
Sbjct: 243 ISLYAKFG 250


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 VSLYARIGDI 10
VSL+A GD+
Sbjct: 1200 VSLHAATGDV 1209


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSLYARIG 8
VSLY +IG
Sbjct: 35 VSLYTQIG 42




60|SequenceR|305|296|LRYFDVSLYA

>sp|AROD_PYRFU|3-DEHYDROQUINATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YFDVSLYA 10
YFDV LY+
Sbjct: 85 YFDVELYS 92


>sp|HMGCS_METTH|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RYFDVSLYA 10
RY D +LYA
Sbjct: 329 RYVDYALYA 337


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 LRYFDVSLY 9
L Y+DV LY
Sbjct: 177 LAYYDVELY 185


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 LRYFDVS 7
+RY+DVS
Sbjct: 261 IRYYDVS 267


>sp|RIFK_PYRCJ|RIBOFLAVIN kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LRYFDVS 7
LRYFD++
Sbjct: 76 LRYFDIA 82


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LRYFDVSLYA 10
LR+ D+++YA
Sbjct: 443 LRWLDLAIYA 452


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 LRYFDVSLY 9
L ++DV LY
Sbjct: 177 LTFYDVELY 185


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 RYFDVSLYA 10
+Y D +LYA
Sbjct: 334 KYLDYALYA 342


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 LRYFDVSLY 9
L ++DV LY
Sbjct: 177 LAFYDVELY 185


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RYFDVSLYA 10
+Y D +LYA
Sbjct: 334 KYIDYALYA 342


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 2 RYFDVSLYA 10
+Y D +LYA
Sbjct: 334 KYIDYALYA 342


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 LRYFDVSLY 9
L ++DV LY
Sbjct: 177 LAFYDVELY 185


>sp|Y2248_HALVD|UNCHARACTERIZED motility-related protein HVO_2248|Haloferax volcanii (strain ATCC

Query: 2 RYFDVSLYA 10
RY++ SLY+
Sbjct: 172 RYYNESLYS 180


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RYFDVSLYA 10
+Y D +LYA
Sbjct: 334 KYIDYALYA 342


>sp|PYRB_THEKO|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus kodakarensis

Query: 1 LRYFDVSLY 9
L ++DV LY
Sbjct: 177 LAFYDVELY 185


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 1 LRYFDVSLY 9
L ++DV LY
Sbjct: 177 LAFYDVELY 185




61|SequenceR|310|301|VSAECLRYFD

>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 AECLRYF 9
A+CLRY+
Sbjct: 348 ADCLRYY 354


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 4 ECLRYF 9
+CLRYF
Sbjct: 166 KCLRYF 171


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 AECLRY 8
AEC RY
Sbjct: 103 AECFRY 108


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 2 SAECLRYFD 10
S EC RY +
Sbjct: 274 SEECYRYLE 282


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 2 SAECLRYFD 10
SA C+ +FD
Sbjct: 544 SAPCIIFFD 552


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 SAECLRYFD 10
+ ECL+++D
Sbjct: 200 AEECLQHYD 208


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ECLRYFD 10
ECL Y++
Sbjct: 109 ECLNYYE 115


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 4 ECLRYFD 10
ECL Y D
Sbjct: 198 ECLEYID 204


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain M.16.4

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 4 ECLRY 8
ECLRY
Sbjct: 208 ECLRY 212




62|SequenceR|315|306|AADIWVSAEC

>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ADIWVSAE 9
AD+W++ E
Sbjct: 231 ADVWITGE 238


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ADIWVSAEC 10
ADI VSA C
Sbjct: 223 ADIKVSASC 231


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ADIWVS 7
AD+WVS
Sbjct: 48 ADVWVS 53


>sp|FWDB_METMP|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanococcus

Query: 5 WVSAEC 10
W SAEC
Sbjct: 91 WSSAEC 96


>sp|AMTAB_PYRHO|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 DIWVSAE 9
+IW+SAE
Sbjct: 186 EIWLSAE 192


>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 3 DIWVSAE 9
+IW+SAE
Sbjct: 186 EIWLSAE 192


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 3 DIWVSAEC 10
DIW EC
Sbjct: 257 DIWEVMEC 264


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 3 DIWVSAEC 10
D W+ EC
Sbjct: 118 DSWICEEC 125


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 3 DIWVSAEC 10
D W+ EC
Sbjct: 118 DSWICEEC 125


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 3 DIWVSAEC 10
D W+ EC
Sbjct: 118 DSWICEEC 125


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 3 DIWVSAEC 10
D W+ EC
Sbjct: 118 DSWICEEC 125


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 4 IWVSAEC 10
+W+ EC
Sbjct: 116 VWIKKEC 122


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 IWVSAEC 10
IW+ EC
Sbjct: 473 IWICEEC 479


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 4 IWVSAEC 10
+WV EC
Sbjct: 174 VWVCPEC 180


>sp|RL39_DESA1|LARGE ribosomal subunit protein eL39|Desulfurococcus amylolyticus

Query: 1 AADIWVSAE 9
A IWVSA+
Sbjct: 22 AIPIWVSAK 30




63|SequenceR|320|311|FCVQTAADIW

>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 CVQTAADIW 10
C++TA +W
Sbjct: 90 CLETARKVW 98


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 FCVQTAADIW 10
+CV AD W
Sbjct: 422 WCVLEGADCW 431


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CVQTAADIW 10
CV T+ D W
Sbjct: 1091 CVDTSLDNW 1099


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FCVQTAADIW 10
FC++ +W
Sbjct: 178 FCIERVHSLW 187


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 1 FCVQTAADI 9
FC AAD+
Sbjct: 146 FCAAAAADL 154




64|SequenceR|325|316|GVGLSFCVQT

>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 1 GVGLSFCV 8
G GLSFC+
Sbjct: 148 GEGLSFCM 155


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GVGLSFC 7
G+G+SFC
Sbjct: 392 GLGVSFC 398


>sp|HYD1B_PYRFU|SULFHYDROGENASE 1 subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGLSFCV 8
+GLS+CV
Sbjct: 307 LGLSYCV 313


>sp|Y455_METJA|UNCHARACTERIZED protein MJ0455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGLSFCV 8
+G++FC+
Sbjct: 70 IGIAFCI 76




65|SequenceR|330|321|ILVGFGVGLS

>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 1 ILVGFGVGLS 10
I +G GVGLS
Sbjct: 324 IAIGMGVGLS 333


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILVGFGV 7
ILVGFG+
Sbjct: 183 ILVGFGI 189


>sp|PFDA_METLZ|PREFOLDIN subunit alpha|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ILVGFGVGLS 10
ILVG G G++
Sbjct: 84 ILVGIGAGIT 93


>sp|PTFA_HALVD|PTS system fructose-specific EIIA component|Haloferax volcanii

Query: 3 VGFGVGL 9
VGFG+G+
Sbjct: 62 VGFGIGI 68


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 1 ILVGFGV 7
ILVGFG+
Sbjct: 183 ILVGFGI 189


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 1 ILVGFGVGLS 10
++VGF VG++
Sbjct: 413 VIVGFNVGVT 422


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ILVGFGVGL 9
+L G GVGL
Sbjct: 442 MLAGLGVGL 450


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ILVGFGVGL 9
+L G GVGL
Sbjct: 442 MLAGLGVGL 450


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ILVGFGVGL 9
+L G GVGL
Sbjct: 442 MLAGLGVGL 450


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ILVGFGVGL 9
+L G GVGL
Sbjct: 442 MLAGLGVGL 450


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ILVGFGVGL 9
+L G GVGL
Sbjct: 442 MLAGLGVGL 450


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILVGFGVGL 9
+L G GVGL
Sbjct: 442 MLAGLGVGL 450


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 ILVGFG 6
ILVGFG
Sbjct: 84 ILVGFG 89


>sp|RS24_AERPE|SMALL ribosomal subunit protein eS24|Aeropyrum pernix (strain ATCC

Query: 1 ILVGFGVGLS 10
I G+G GLS
Sbjct: 73 IKTGYGAGLS 82


>sp|TMBL2_THEKO|DNA-BINDING HTH-type transcriptional repressor TrmBL2|Thermococcus

Query: 2 LVGFGV 7
LVGFGV
Sbjct: 27 LVGFGV 32


>sp|SYDND_SULTO|ASPARTATE--TRNA(ASP/ASN) ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GFGVGLS 10
GFG+GL+
Sbjct: 396 GFGMGLA 402


>sp|SYDND_SACS2|ASPARTATE--TRNA(ASP/ASN) ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GFGVGLS 10
GFG+GL+
Sbjct: 396 GFGMGLA 402


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 4 GFGVGLS 10
G+GVGL+
Sbjct: 509 GYGVGLA 515


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ILVGFGVGLS 10
++ GF VGLS
Sbjct: 232 VVTGFRVGLS 241


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ILVGFGVGLS 10
++ GF VGLS
Sbjct: 232 VVTGFRVGLS 241


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ILVGFGV 7
+LVGFG+
Sbjct: 516 VLVGFGL 522


>sp|Y523_METJA|UNCHARACTERIZED protein MJ0523|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILVGFGVGL 9
ILVGF +G+
Sbjct: 16 ILVGFAIGI 24


>sp|HPPA_PYRAE|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Pyrobaculum aerophilum (strain

Query: 1 ILVGFGVGL 9
I+ G+GVGL
Sbjct: 370 IITGYGVGL 378


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILVGFGVGL 9
+++G+ VGL
Sbjct: 21 VIIGYSVGL 29


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 1 ILVGFGVG 8
I+VG G+G
Sbjct: 185 IVVGIGIG 192


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 1 ILVGFGVGLS 10
+LVG G+G++
Sbjct: 105 LLVGGGIGMA 114


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ILVGFG 6
ILVGFG
Sbjct: 365 ILVGFG 370


>sp|TRPA_METTM|TRYPTOPHAN synthase alpha chain|Methanothermobacter marburgensis (strain ATCC

Query: 1 ILVGFGV 7
++VGFGV
Sbjct: 203 VMVGFGV 209




66|SequenceR|335|326|YSSFAILVGF

>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YSSFAILVGF 10
Y+S+ + VGF
Sbjct: 42 YASYGLPVGF 51




67|SequenceR|340|331|NTFKNYSSFA

>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 NTFKNY 6
NTFKNY
Sbjct: 249 NTFKNY 254


>sp|HUTI_THEVO|IMIDAZOLONEPROPIONASE volcanium (strain ATCC 51530

Query: 1 NTFKNYSSFA 10
++F+NY SFA
Sbjct: 194 SSFRNYISFA 203


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NTFKNYSSFA 10
N F NYS F+
Sbjct: 81 NFFMNYSDFS 90


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NTFKNYSSFA 10
N F NYS F+
Sbjct: 81 NFFMNYSDFS 90


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NTFKNYSSFA 10
N F NYS F+
Sbjct: 81 NFFMNYSDFS 90




68|SequenceR|345|336|DRYCNNTFKN

>sp|MFNA_METM7|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 5 NNTFKN 10
NNTFKN
Sbjct: 248 NNTFKN 253


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DRYCNNTFKN 10
DRY NT N
Sbjct: 399 DRYGGNTISN 408


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus (strain

Query: 2 RYCNNT 7
R CNNT
Sbjct: 315 RLCNNT 320


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DRYCNN 6
D+YC+N
Sbjct: 107 DQYCDN 112


>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YCNNTFKN 10
YC+ F+N
Sbjct: 43 YCDTNFEN 50


>sp|Y1445_METJA|UNCHARACTERIZED protein MJ1445|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RYCNNTFKN 10
+YCN F N
Sbjct: 21 KYCNRPFSN 29


>sp|Y282_METJA|UNCHARACTERIZED protein MJ0282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRYCNNTFKN 10
D + N T KN
Sbjct: 62 DNFMNKTLKN 71




69|SequenceR|350|341|TTVIADRYCN

>sp|KTHY_METAC|PROBABLE thymidylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TVIADRYCN 10
TVI+DRY +
Sbjct: 88 TVISDRYSD 96


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 3 VIADRYCN 10
++AD +CN
Sbjct: 307 IVADEWCN 314


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 IADRYCN 10
+ADR CN
Sbjct: 540 LADRMCN 546


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 IADRYC 9
I DRYC
Sbjct: 216 IVDRYC 221


>sp|NIKR_HALMA|PUTATIVE nickel-responsive regulator|Haloarcula marismortui (strain ATCC

Query: 4 IADRYC 9
+ DRYC
Sbjct: 91 VGDRYC 96


>sp|PURT_SULTO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfurisphaera

Query: 2 TVIADRY 8
TV+ DRY
Sbjct: 37 TVVVDRY 43




70|SequenceR|355|346|LSNISTTVIA

***** No hits found ******


71|SequenceR|360|351|SSFSTLSNIS

***** No hits found ******


72|SequenceR|365|356|FVVFGSSFST

>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 3 VFGSSFS 9
VFGS+FS
Sbjct: 216 VFGSTFS 222


>sp|TKTC_METJA|PUTATIVE transketolase C-terminal section|Methanocaldococcus jannaschii

Query: 2 VVFGSSFS 9
+VF SSFS
Sbjct: 76 IVFASSFS 83


>sp|THIE_PICTO|THIAMINE-PHOSPHATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 FVVFGSSFST 10
++ FGS F T
Sbjct: 122 YIAFGSFFKT 131




73|SequenceR|370|361|YGLFSFVVFG

>sp|Y1460_METJA|UNCHARACTERIZED protein MJ1460|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGLFSFVVF 9
+GLF+ V+F
Sbjct: 32 FGLFALVIF 40


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 SFVVFG 10
SFVVFG
Sbjct: 115 SFVVFG 120


>sp|Y2102_ARCFU|UNCHARACTERIZED protein AF_2102|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGLFSFVVF 9
YG+F+FVV
Sbjct: 5 YGIFAFVVL 13




74|SequenceR|375|366|HKQAMYGLFS

>sp|TRM1_PYRIL|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum islandicum

Query: 1 HKQAMYGLFS 10
HK + YG++S
Sbjct: 272 HKMSQYGVYS 281


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AMYGLFS 10
AMYG FS
Sbjct: 173 AMYGTFS 179




75|SequenceR|380|371|GIPVSHKQAM

>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 1 GIPVSHKQA 9
GIPV+H+++
Sbjct: 131 GIPVTHRES 139


>sp|T2M7_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 GIPVSHKQA 9
GIP HK A
Sbjct: 45 GIPTLHKMA 53


>sp|SUMT_METJA|UROPORPHYRINOGEN-III C-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GIPVSHKQ 8
GIPV+H++
Sbjct: 128 GIPVTHRK 135


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IPVSHKQAM 10
+P SH+QA+
Sbjct: 166 VPFSHEQAL 174


>sp|APT_METM5|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 GIPVSHK 7
GIPV+H+
Sbjct: 63 GIPVAHE 69


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 GIPVSHK 7
G+P+ HK
Sbjct: 90 GLPIEHK 96


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GIPVSHK 7
G+P+ HK
Sbjct: 90 GLPIEHK 96


>sp|Y474_KORCO|UPF0310 protein Kcr_0474|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GIPVSHKQAM 10
G+P HK A+
Sbjct: 23 GVPERHKNAI 32


>sp|APT_METMP|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 GIPVSHK 7
G+PV+H+
Sbjct: 63 GVPVAHE 69


>sp|APT_METM7|ADENINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 GIPVSHK 7
G+PV+H+
Sbjct: 63 GVPVAHE 69


>sp|SUMT_METIV|UROPORPHYRINOGEN-III C-methyltransferase|Methanobacterium ivanovii

Query: 1 GIPVSHK 7
G+PV+H+
Sbjct: 125 GLPVTHR 131




76|SequenceR|385|376|DKAVDGIPVS

>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 2 KAVDGIPVS 10
KA++GIPVS
Sbjct: 392 KAMEGIPVS 400


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 54 NKAISGEPVS 63


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 KAVDGIPVS 10
KA +GIPV+
Sbjct: 638 KAREGIPVT 646


>sp|COAD_METBF|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 AVDGIPVS 10
A DGIP+S
Sbjct: 128 AEDGIPIS 135


>sp|FER8_METJA|UNCHARACTERIZED ferredoxin MJ0155|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KAVDGIPV 9
+ VDGIP+
Sbjct: 33 RKVDGIPI 40


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 AVDGIPV 9
AVDG PV
Sbjct: 238 AVDGTPV 244


>sp|COAD_METMA|PHOSPHOPANTETHEINE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 AVDGIPVS 10
A DGIP+S
Sbjct: 128 AEDGIPIS 135


>sp|RL4_NANEQ|LARGE ribosomal subunit protein uL4|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 KAVDGIP 8
KAVD IP
Sbjct: 220 KAVDNIP 226


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 4 VDGIPV 9
+DGIPV
Sbjct: 367 IDGIPV 372


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 KAVDGIP 8
+AVDGIP
Sbjct: 663 EAVDGIP 669


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKAVDG 6
DKA+DG
Sbjct: 46 DKAIDG 51


>sp|GATA_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 4 VDGIPV 9
VDGIPV
Sbjct: 426 VDGIPV 431


>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 55 NKAISGEPVS 64


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 2 KAVDGIPVS 10
KAV GIP++
Sbjct: 321 KAVLGIPIA 329


>sp|Y1393_METJA|UNCHARACTERIZED protein MJ1393|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DKAVDGIPV 9
DK++ G+P+
Sbjct: 136 DKSITGVPL 144


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VDGIPVS 10
VDGIPV
Sbjct: 516 VDGIPVK 522


>sp|MTRE_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 55 NKAISGEPVS 64


>sp|MTRE_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 55 NKAISGEPVS 64


>sp|RIFK_PYRAR|RIBOFLAVIN kinase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 AVDGIPVS 10
+V+G+PVS
Sbjct: 17 SVEGLPVS 24


>sp|MTRE_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus vannielii (strain

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 55 NKAISGEPVS 64


>sp|MTRE_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 55 NKAISGEPVS 64


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DKAVDGIP 8
DKAV G+P
Sbjct: 128 DKAVYGLP 135


>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AVDGIPV 9
A++GIPV
Sbjct: 521 AIEGIPV 527


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 1 DKAVDGIPVS 10
+KA+ G PVS
Sbjct: 55 NKAISGEPVS 64


>sp|PDXT_STAMF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Staphylothermus marinus

Query: 1 DKAVDGIPV 9
+K V+G+PV
Sbjct: 72 EKIVEGLPV 80




77|SequenceR|390|381|ILGPGDKAVD

>sp|MER_METMA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LGPGDKAV 9
LGPGDKA
Sbjct: 92 LGPGDKAT 99


>sp|MER_METAC|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LGPGDKAV 9
LGPGDKA
Sbjct: 92 LGPGDKAT 99


>sp|MER_METBF|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LGPGDKAV 9
LGPGDKA
Sbjct: 92 LGPGDKAT 99


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC

Query: 1 ILGPGDKA 8
ILGPGD A
Sbjct: 55 ILGPGDDA 62


>sp|GVPF1_HALSA|GAS vesicle protein F1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILGPGDKAV 9
ILGPGD V
Sbjct: 118 ILGPGDDTV 126


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC

Query: 1 ILGPGDKA 8
ILGPGD A
Sbjct: 55 ILGPGDDA 62


>sp|MER_METKA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanopyrus kandleri (strain AV19 /

Query: 2 LGPGDKAV 9
+GPGDKA
Sbjct: 95 MGPGDKAT 102


>sp|HFLX_HYPBU|GTPASE HflX|Hyperthermus butylicus (strain DSM 5456

Query: 2 LGPGDKAVD 10
LGPG A+D
Sbjct: 149 LGPGGYAID 157


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGPGDKA 8
+GPGDKA
Sbjct: 92 IGPGDKA 98


>sp|MER_METTH|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LGPGDKAV 9
+GPGDKA
Sbjct: 92 IGPGDKAT 99


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILGPGDKAVD 10
I GPG+K V+
Sbjct: 176 IFGPGNKFVN 185


>sp|MER_METTM|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 LGPGDKAV 9
+GPGDKA
Sbjct: 92 IGPGDKAT 99


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 ILGPGDKAVD 10
I GPG+K V+
Sbjct: 176 IFGPGNKYVN 185


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILGPGDKAV 9
IL PGDK V
Sbjct: 254 ILRPGDKVV 262


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC

Query: 2 LGPGDKAVD 10
+GPGD++V+
Sbjct: 29 VGPGDRSVE 37


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 ILGPGDKAVD 10
I+G GD AVD
Sbjct: 156 IVGGGDSAVD 165


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LGPGDKAVD 10
+GPGD+A D
Sbjct: 7 IGPGDEAPD 15


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILGPGDKAVD 10
I+G GD AVD
Sbjct: 156 IVGGGDSAVD 165


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILGPGDKAVD 10
I+G GD AVD
Sbjct: 151 IVGGGDSAVD 160


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PGDKAV 9
PGDKAV
Sbjct: 114 PGDKAV 119


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILGPGDKAVD 10
I+G GD AVD
Sbjct: 156 IVGGGDSAVD 165


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILGPGDKA 8
ILGPG+ A
Sbjct: 53 ILGPGEDA 60


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILGPGDKAVD 10
I+G GD AVD
Sbjct: 155 IVGGGDSAVD 164


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain

Query: 1 ILGPGDKA 8
I+GPGD A
Sbjct: 55 IIGPGDDA 62


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 ILGPGDKA 8
I+GPGD A
Sbjct: 55 IIGPGDDA 62


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 ILGPGDKAVD 10
++GPG+ AV
Sbjct: 365 VIGPGETAVS 374


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM

Query: 1 ILGPGDKA 8
ILGPG+ A
Sbjct: 53 ILGPGEDA 60


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILGPGDKA 8
I+GPGD A
Sbjct: 54 IIGPGDDA 61


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 3 GPGDKAVD 10
GP DK VD
Sbjct: 241 GPTDKVVD 248


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 4 PGDKAV 9
PGDKA+
Sbjct: 107 PGDKAI 112


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LGPGDKAV 9
LGPGD+ V
Sbjct: 117 LGPGDEVV 124


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ILGPGDKA 8
I+GPGD A
Sbjct: 54 IIGPGDDA 61


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 4 PGDKAV 9
PGDKA+
Sbjct: 109 PGDKAI 114


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ILGPGDKAV 9
I+ PGDK V
Sbjct: 101 IVEPGDKVV 109


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 ILGPGDKA 8
ILGPG+ A
Sbjct: 53 ILGPGEDA 60


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 4 PGDKAV 9
PGDKA+
Sbjct: 109 PGDKAI 114


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 1 ILGPGDKA 8
ILGPG+ A
Sbjct: 53 ILGPGEDA 60


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 1 ILGPGDKAV 9
I+ PGDK V
Sbjct: 254 IIKPGDKVV 262


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 1 ILGPGDKAV 9
I+ PGDK V
Sbjct: 254 IIKPGDKVV 262


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 1 ILGPGDKAV 9
I+ PGDK V
Sbjct: 254 IIKPGDKVV 262


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 LGPGDKAV 9
LGPGD V
Sbjct: 129 LGPGDSVV 136


>sp|EF1A_THEAC|ELONGATION factor 1-alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ILGPGDKAV 9
+L PGDK +
Sbjct: 252 VLKPGDKVI 260


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILGPGDKA 8
+LGPG+ A
Sbjct: 53 VLGPGEDA 60


>sp|EF1A_THEVO|ELONGATION factor 1-alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ILGPGDKAV 9
+L PGDK +
Sbjct: 252 VLKPGDKVI 260


>sp|PURL_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanopyrus kandleri (strain AV19 /

Query: 1 ILGPGDKA 8
I+GPGD A
Sbjct: 55 IVGPGDDA 62


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 4 PGDKAV 9
PGDKA+
Sbjct: 108 PGDKAL 113


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILGPGDKAV 9
ILG GDK +
Sbjct: 184 ILGDGDKYI 192


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 1 ILGPGDKA 8
+LGPG+ A
Sbjct: 53 VLGPGEDA 60


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ILGPGDKAV 9
++ PGDK V
Sbjct: 254 VMKPGDKVV 262


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC

Query: 1 ILGPGDKA 8
++GPGD A
Sbjct: 56 VVGPGDDA 63


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ILGPGDKAV 9
++GPGD A
Sbjct: 55 VVGPGDDAA 63


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ILGPGDKA 8
++GPGD A
Sbjct: 63 VIGPGDDA 70


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ILGPGDKAV 9
++GPGD A
Sbjct: 55 VVGPGDDAA 63


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGPGDKAVD 10
LGP KAV+
Sbjct: 47 LGPSPKAVE 55


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 1 ILGPGDKAV 9
I+ PGDK +
Sbjct: 254 IIKPGDKVI 262


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 1 ILGPGDKAV 9
I+ PGDK +
Sbjct: 254 IIKPGDKVI 262




78|SequenceR|395|386|PYIIFILGPG

>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 PYIIFILGPG 10
PY+ ++GPG
Sbjct: 311 PYVFDLVGPG 320


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 1 PYIIFILG 8
PYI+ +LG
Sbjct: 99 PYIVLLLG 106


>sp|SRP54_PYRAE|SIGNAL recognition particle 54 kDa|Pyrobaculum aerophilum (strain ATCC

Query: 1 PYIIFILG 8
PYI+ +LG
Sbjct: 99 PYIVLLLG 106


>sp|RFCL_IGNH4|REPLICATION factor C large subunit|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PYIIFILGPG 10
PY LGPG
Sbjct: 311 PYFFNALGPG 320


>sp|SRP54_PYRNV|SIGNAL recognition particle 54 kDa|Pyrobaculum neutrophilum (strain DSM

Query: 1 PYIIFILG 8
PY++ +LG
Sbjct: 99 PYVVLLLG 106


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 1 PYIIFILG 8
PY++ +LG
Sbjct: 98 PYVVLLLG 105


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PYIIFILG 8
PY++ +LG
Sbjct: 99 PYLVLLLG 106


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PYIIFILGP 9
PY+ F GP
Sbjct: 76 PYLNFSFGP 84


>sp|DPHB_THEAC|DIPHTHINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PYIIFIL 7
PY++FIL
Sbjct: 225 PYMMFIL 231


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YIIFILGP 9
YI+++L P
Sbjct: 477 YIVYLLSP 484


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PYIIFILGP 9
P ++F+ GP
Sbjct: 192 PSVVFVSGP 200


>sp|Y816_METB6|UPF0173 metal-dependent hydrolase Mboo_0816|Methanoregula boonei (strain

Query: 4 IFILGPG 10
+F+LGPG
Sbjct: 207 VFLLGPG 213


>sp|YE1A_METJA|UNCHARACTERIZED protein MJ1417.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIIFILGPG 10
Y+I+I+G G
Sbjct: 2 YLIWIIGGG 10


>sp|MJK2_METJA|PROBABLE potassium channel protein 2|Methanocaldococcus jannaschii (strain

Query: 1 PYIIFILGPG 10
PY FIL PG
Sbjct: 308 PYPEFILKPG 317


>sp|SUDHB_PYRFU|SULFIDE dehydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YIIFILGP 9
YI+ +LGP
Sbjct: 81 YILDVLGP 88


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YIIFILGP 9
YII ++GP
Sbjct: 145 YIIHVVGP 152




79|SequenceR|400|391|TAIAEPYIIF

>sp|RL30_SULTO|LARGE ribosomal subunit protein uL30|Sulfurisphaera tokodaii (strain

Query: 3 IAEPYIIF 10
IAEPYI +
Sbjct: 50 IAEPYITW 57


>sp|ASPD_META3|L-ASPARTATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TAIAEPYIIF 10
T I+EP ++F
Sbjct: 164 TNISEPTVVF 173




80|SequenceR|405|396|SSLPLTAIAE

>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 1 SSLPLTAIAE 10
SS+P TA+ E
Sbjct: 203 SSMPNTAVIE 212




81|SequenceR|410|401|VVAWASSLPL

>sp|GUAAB_METBU|GMP synthase [glutamine-hydrolyzing] subunit B|Methanococcoides

Query: 2 VAWASSLP 9
VAWA LP
Sbjct: 170 VAWALDLP 177


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 4 WASSLPL 10
W SSLPL
Sbjct: 92 WRSSLPL 98


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 2 VAWASSLP 9
VAWA LP
Sbjct: 171 VAWALKLP 178


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 2 VAWASSLP 9
VAWA LP
Sbjct: 171 VAWALQLP 178


>sp|IDI2_PYRHO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VAWASSLPL 10
V WA++LP+
Sbjct: 265 VRWATNLPI 273


>sp|GUAAB_METMA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina mazei

Query: 2 VAWASSLP 9
VAWA LP
Sbjct: 171 VAWALQLP 178


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 VAWASSLPL 10
V WA++LP+
Sbjct: 264 VRWATNLPI 272


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 1 VVAWAS 6
+VAWAS
Sbjct: 120 IVAWAS 125




82|SequenceR|415|406|LMIFFVVAWA

>sp|ICMT_METAC|PROTEIN-S-ISOPRENYLCYSTEINE O-methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LMIFFVVAWA 10
++IF +VAWA
Sbjct: 148 VLIFGIVAWA 157


>sp|Y790_METJA|UNCHARACTERIZED protein MJ0790|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MIFFVVAWA 10
MIF V AWA
Sbjct: 143 MIFAVFAWA 151


>sp|Y3516_METJA|UNCHARACTERIZED protein MJECL16|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LMIFFVVAW 9
L++FF++ W
Sbjct: 52 LLVFFIILW 60




83|SequenceR|420|411|IGLTLLMIFF

>sp|ARLY_SULTO|ARGININOSUCCINATE lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LTLLMIFF 10
L+LLM+FF
Sbjct: 231 LSLLMLFF 238


>sp|Y1633_ARCFU|UNCHARACTERIZED protein AF_1633|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGLTLLMIF 9
+GL L+M+F
Sbjct: 112 VGLVLMMVF 120


>sp|WTPB_PYRFU|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus furiosus (strain

Query: 1 IGLTLLMIF 9
IGL L MIF
Sbjct: 22 IGLPLFMIF 30




84|SequenceR|425|416|GMASDIGLTL

>sp|NFI_THEKO|ENDONUCLEASE V|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GMASDIGLTL 10
G+AS IGL L
Sbjct: 112 GLASHIGLVL 121


>sp|ILVC_METJA|KETOL-ACID reductoisomerase (NADP(+))|Methanocaldococcus jannaschii (strain

Query: 1 GMASDIGLT 9
GMA IGLT
Sbjct: 167 GMAKGIGLT 175


>sp|NFI_PYRAB|ENDONUCLEASE V|Pyrococcus abyssi (strain GE5 /

Query: 1 GMASDIGLTL 10
G+AS IGL L
Sbjct: 106 GLASHIGLIL 115


>sp|COME_METJA|SULFOPYRUVATE decarboxylase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 GMASDIGLTL 10
G+AS IGL L
Sbjct: 50 GLASSIGLGL 59


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 1 GMASDIGLTL 10
GMAS IGL L
Sbjct: 49 GMASSIGLGL 58


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 1 GMASDIGLTL 10
G+A+ IG+TL
Sbjct: 151 GLATHIGVTL 160


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GMASDIGL 8
G+A DIGL
Sbjct: 277 GIAQDIGL 284


>sp|NFI_PYRHO|ENDONUCLEASE V|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GMASDIGLTL 10
G+AS IG+ L
Sbjct: 106 GLASHIGVVL 115




85|SequenceR|430|421|VSEMGGMASD

>sp|Y1113_METJA|PUTATIVE glycosyltransferase MJ1113|Methanocaldococcus jannaschii (strain

Query: 1 VSEMGGMA 8
V EMGG+A
Sbjct: 47 VPEMGGLA 54


>sp|HIS7_SACI6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133


>sp|HIS7_SACI4|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133


>sp|HIS7_SACI3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133


>sp|HIS7_SACI7|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133


>sp|HIS7_SACI2|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133


>sp|HIS7_SACI1|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133


>sp|HIS7_SACS2|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SEMGGMASD 10
SE+GG+A++
Sbjct: 125 SEIGGLATE 133




86|SequenceR|435|426|ILGTIVSEMG

>sp|PCNA_PICTO|DNA polymerase sliding clamp|Picrophilus torridus (strain ATCC 700027

Query: 1 ILGTIVSEM 9
+LGTIVSE+
Sbjct: 17 MLGTIVSEV 25


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LGTIVSEMG 10
LGTI+ EMG
Sbjct: 180 LGTILEEMG 188


>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 ILGTIVSEMG 10
I+ TIVSE+G
Sbjct: 86 IVDTIVSEIG 95


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 ILGTIVSEM 9
+L TI+SEM
Sbjct: 13 LLKTIISEM 21


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 ILGTIVSEMG 10
IL TIV E G
Sbjct: 1071 ILHTIVKEFG 1080


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 ILGTIVSEMG 10
+ T+VSE+G
Sbjct: 315 VFETVVSELG 324


>sp|Y1244_METJA|UNCHARACTERIZED protein MJ1244|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILGTIVSE 8
++GTIVSE
Sbjct: 67 LIGTIVSE 74


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILGTIVSEMG 10
I+GT+V ++G
Sbjct: 93 IVGTVVDKVG 102




87|SequenceR|440|431|LQFEDILGTI

>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 1 LQFEDILGTI 10
LQF DILGT+
Sbjct: 33 LQFTDILGTV 42


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LQFEDILGTI 10
LQF DILGT+
Sbjct: 32 LQFTDILGTV 41


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 1 LQFEDILGTI 10
LQF DILGT+
Sbjct: 33 LQFTDILGTV 42


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQFEDILGTI 10
LQF D+LG +
Sbjct: 25 LQFTDLLGKL 34


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 1 LQFEDILG 8
L+FEDI+G
Sbjct: 278 LKFEDIIG 285


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 1 LQFEDILGTI 10
+ FED++G I
Sbjct: 605 ITFEDVMGII 614


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 3 FEDILGT 9
FED++GT
Sbjct: 196 FEDLVGT 202


>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC

Query: 3 FEDILGT 9
FED+LG+
Sbjct: 74 FEDLLGS 80


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQFEDILGTI 10
LQF +I+G +
Sbjct: 126 LQFPEIVGAV 135


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 EDILGTI 10
E+ILGTI
Sbjct: 416 EEILGTI 422


>sp|FLPA_HALSA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halobacterium salinarum (strain

Query: 3 FEDILGTI 10
FED+LG +
Sbjct: 176 FEDLLGRL 183


>sp|FLPA_HALS3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Halobacterium salinarum (strain

Query: 3 FEDILGTI 10
FED+LG +
Sbjct: 176 FEDLLGRL 183


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 EDILGTI 10
+DILGT+
Sbjct: 136 DDILGTV 142


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 QFEDILGTI 10
+ EDI GTI
Sbjct: 439 RLEDIAGTI 447




88|SequenceR|445|436|RHRHLLQFED

>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HRHLLQFED 10
HR +QF+D
Sbjct: 389 HRSTIQFQD 397


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HRHLLQFED 10
HRHL F D
Sbjct: 45 HRHLTGFLD 53


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 1 RHRHLLQFED 10
RHR ++ ED
Sbjct: 213 RHRSIVTIED 222




89|SequenceR|450|441|LTFLERHRHL

>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LTFLERHRH 9
L+F ERH H
Sbjct: 67 LSFFERHGH 75


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TFLERHRH 9
T ERHRH
Sbjct: 447 TIYERHRH 454


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LTFLERHRH 9
L+F ERH H
Sbjct: 70 LSFFERHGH 78


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LTFLERHRH 9
L+F ERH H
Sbjct: 67 LSFFERHGH 75


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 4 LERHRH 9
LERHRH
Sbjct: 458 LERHRH 463


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 TFLERHRH 9
T ERHRH
Sbjct: 446 TITERHRH 453


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 LERHRH 9
+ERHRH
Sbjct: 449 IERHRH 454


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LERHRH 9
+ERHRH
Sbjct: 449 VERHRH 454


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LERHRH 9
+ERHRH
Sbjct: 454 VERHRH 459


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LERHRH 9
+ERHRH
Sbjct: 454 VERHRH 459


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LERHRH 9
+ERHRH
Sbjct: 454 VERHRH 459


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 4 LERHRH 9
LE+HRH
Sbjct: 187 LEKHRH 192


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 4 LERHRH 9
LE+HRH
Sbjct: 187 LEKHRH 192


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 4 LERHRH 9
LE+HRH
Sbjct: 187 LEKHRH 192


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis (strain

Query: 4 LERHRH 9
LE+HRH
Sbjct: 187 LEKHRH 192


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 LERHRH 9
ERHRH
Sbjct: 461 FERHRH 466


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LERHRH 9
+ERHRH
Sbjct: 451 VERHRH 456


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 4 LERHRH 9
+ERHRH
Sbjct: 449 IERHRH 454


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 ERHRH 9
ERHRH
Sbjct: 458 ERHRH 462


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 ERHRH 9
ERHRH
Sbjct: 457 ERHRH 461


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 ERHRH 9
ERHRH
Sbjct: 462 ERHRH 466


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 ERHRH 9
ERHRH
Sbjct: 446 ERHRH 450


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 ERHRH 9
ERHRH
Sbjct: 455 ERHRH 459


>sp|PYRG_METMP|CTP synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 ERHRH 9
ERHRH
Sbjct: 459 ERHRH 463


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 ERHRH 9
ERHRH
Sbjct: 463 ERHRH 467


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 5 ERHRH 9
ERHRH
Sbjct: 455 ERHRH 459


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 ERHRH 9
ERHRH
Sbjct: 450 ERHRH 454


>sp|PYRG_METLZ|CTP synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 LERHRH 9
+ERHRH
Sbjct: 450 VERHRH 455


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LTFLERHRH 9
L ERHRH
Sbjct: 451 LRIRERHRH 459


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 ERHRH 9
ERHRH
Sbjct: 466 ERHRH 470


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 LERHRH 9
+ERHRH
Sbjct: 453 VERHRH 458


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 LERHRH 9
+ERHRH
Sbjct: 458 VERHRH 463


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 ERHRH 9
ERHRH
Sbjct: 457 ERHRH 461


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 5 ERHRH 9
ERHRH
Sbjct: 465 ERHRH 469


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 5 ERHRH 9
ERHRH
Sbjct: 465 ERHRH 469


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 ERHRH 9
ERHRH
Sbjct: 454 ERHRH 458


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 5 ERHRH 9
ERHRH
Sbjct: 467 ERHRH 471


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 5 ERHRH 9
ERHRH
Sbjct: 467 ERHRH 471


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 3 FLERHRHL 10
+LER RH+
Sbjct: 202 YLERPRHI 209


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 ERHRH 9
ERHRH
Sbjct: 467 ERHRH 471


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTFLERHRH 9
L+F E+H H
Sbjct: 54 LSFFEKHGH 62


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LTFLERHRH 9
L+F E H H
Sbjct: 70 LSFFEEHGH 78


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 ERHRH 9
ERHRH
Sbjct: 461 ERHRH 465


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FLERHRH 9
FLER RH
Sbjct: 19 FLERKRH 25


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LTFLERHR 8
L LERHR
Sbjct: 190 LAVLERHR 197


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 FLERHRH 9
F ERH H
Sbjct: 71 FFERHDH 77


>sp|RADB_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 LTFLERHR 8
L LERHR
Sbjct: 200 LAVLERHR 207


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 TFLERHR 8
+FLE+HR
Sbjct: 377 SFLEQHR 383


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 4 LERHRHL 10
++RHRH+
Sbjct: 338 MDRHRHV 344


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TFLERHRHL 10
+ L+RH HL
Sbjct: 225 SHLDRHEHL 233


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 LTFLERHRH 9
L F+E H H
Sbjct: 11 LNFIEDHEH 19




90|SequenceR|455|446|ALVIFLTFLE

>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ALVIFLTFLE 10
AL IFL F+E
Sbjct: 96 ALSIFLGFIE 105




91|SequenceR|460|451|SLLFTALVIF

>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 SLLFTALVIF 10
SL+F +++IF
Sbjct: 16 SLIFYSIIIF 25




92|SequenceR|465|456|TVCFLSLLFT

***** No hits found ******


93|SequenceR|470|461|YIGGNTVCFL

>sp|PGP_METMJ|PHOSPHOGLYCOLATE phosphatase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GNTVCFL 10
GNTVCF+
Sbjct: 43 GNTVCFM 49


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 YIGGNTVCFL 10
Y+ G TVC +
Sbjct: 14 YLDGKTVCII 23


>sp|AROK_METVS|SHIKIMATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YIGGNTVC 8
Y GG TVC
Sbjct: 144 YFGGITVC 151


>sp|AROK_METM5|SHIKIMATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 YIGGNTVC 8
Y GG TVC
Sbjct: 144 YFGGITVC 151


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GNTVCFL 10
GNTVC +
Sbjct: 27 GNTVCLI 33


>sp|AROK_METMP|SHIKIMATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YIGGNTVC 8
Y GG TVC
Sbjct: 144 YFGGITVC 151


>sp|AROK_METM6|SHIKIMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 YIGGNTVC 8
Y GG TVC
Sbjct: 144 YFGGITVC 151


>sp|AROK_METM7|SHIKIMATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 YIGGNTVC 8
Y GG TVC
Sbjct: 144 YFGGITVC 151


>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 2 IGGNTVC 8
+GG TVC
Sbjct: 60 LGGKTVC 66


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGGNTVCFL 10
IGGNT+ L
Sbjct: 309 IGGNTIASL 317


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 2 IGGNTVC 8
IGG+ VC
Sbjct: 100 IGGDVVC 106


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YIGGNTV 7
YIGG TV
Sbjct: 100 YIGGGTV 106


>sp|SURE_METTP|5'-NUCLEOTIDASE SurE|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YIGGNTVC 8
+IGG+ +C
Sbjct: 216 WIGGDLIC 223


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IGGNTVCF 9
+ GNT CF
Sbjct: 38 VTGNTHCF 45


>sp|RISB_METVS|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YIGGNTVC 8
++G N VC
Sbjct: 29 FLGANVVC 36


>sp|AROB_THEAC|3-DEHYDROQUINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YIGGNTV 7
Y+GG TV
Sbjct: 100 YVGGGTV 106


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 4 GNTVCF 9
GNT+C+
Sbjct: 43 GNTLCY 48


>sp|LYSZ_PYRNV|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 IGGNTVC 8
IGG+ VC
Sbjct: 6 IGGSVVC 12


>sp|LYSZ_PYRAE|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 2 IGGNTVC 8
IGG+ VC
Sbjct: 6 IGGSVVC 12


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 1 YIGGNTVCFL 10
Y+GGN L
Sbjct: 170 YVGGNIATML 179


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 YIGGNTVCFL 10
Y GGN +C +
Sbjct: 135 YYGGNGICLV 144


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 YIGGNTVCFL 10
Y GGN +C +
Sbjct: 135 YYGGNGICLV 144


>sp|DGGGP_HALSA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YIGGNTVCF 9
Y+GG+T F
Sbjct: 138 YLGGSTFVF 146


>sp|DGGGP_HALS3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YIGGNTVCF 9
Y+GG+T F
Sbjct: 138 YLGGSTFVF 146


>sp|GLMM_THEON|PROBABLE phosphoglucosamine mutase|Thermococcus onnurineus (strain NA1)

Query: 1 YIGGNTV 7
Y+GG TV
Sbjct: 33 YLGGGTV 39


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 YIGGNTV 7
Y+GG TV
Sbjct: 33 YLGGGTV 39




94|SequenceR|475|466|LLTFVYIGGN

>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 TFVYIGG 9
+F+YIGG
Sbjct: 282 SFIYIGG 288


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 5 VYIGGN 10
VY+GGN
Sbjct: 62 VYLGGN 67


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 5 VYIGGN 10
+Y+GGN
Sbjct: 344 IYVGGN 349


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 5 VYIGGN 10
+Y+GGN
Sbjct: 342 IYVGGN 347


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 LLTFVYIGG 9
+LTF +IGG
Sbjct: 489 ILTFYWIGG 497


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 TFVYIGG 9
TF+Y GG
Sbjct: 104 TFIYHGG 110


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 4 FVYIGG 9
F+YIGG
Sbjct: 128 FMYIGG 133




95|SequenceR|480|471|AAFHDLLTFV

>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM

Query: 1 AAFHDLLTF 9
AAFHDL +
Sbjct: 31 AAFHDLTGY 39


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 AAFHDL 6
AAFHDL
Sbjct: 31 AAFHDL 36


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 HDLLTF 9
HD+LTF
Sbjct: 244 HDVLTF 249




96|SequenceR|485|476|LISTGAAFHD

>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 LISTGAAFH 9
LIS G A+H
Sbjct: 310 LISKGVAYH 318


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LISTGAAFH 9
LIS G A+H
Sbjct: 303 LISKGVAYH 311


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 LISTGAAFH 9
LIS G A+H
Sbjct: 310 LISKGVAYH 318


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 2 ISTGAAFH 9
++ GAAFH
Sbjct: 295 VAKGAAFH 302


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 ISTGAAFH 9
+++GAAFH
Sbjct: 313 VASGAAFH 320


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 ISTGAAFH 9
+++GAAFH
Sbjct: 313 VASGAAFH 320


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 LISTGAAFHD 10
+I+ GAAF D
Sbjct: 280 VINAGAAFDD 289


>sp|HELS_HALMA|ATP-DEPENDENT DNA helicase Hel308|Haloarcula marismortui (strain ATCC 43049

Query: 2 ISTGAAFH 9
++ GAAFH
Sbjct: 305 VADGAAFH 312


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 1 LISTGAAFHD 10
L S GAAF D
Sbjct: 13 LDSVGAAFFD 22


>sp|COXX2_PYRCJ|PROTOHEME IX farnesyltransferase 2|Pyrobaculum calidifontis (strain DSM

Query: 1 LISTGAAF 8
L+S GAAF
Sbjct: 77 LVSVGAAF 84


>sp|HELS_NATPD|ATP-DEPENDENT DNA helicase Hel308|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ISTGAAFH 9
+ GAAFH
Sbjct: 305 VEQGAAFH 312




97|SequenceR|490|481|ILVGFLISTG

>sp|DGGGP_METMJ|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LVGFLISTG 10
L+G+LI+TG
Sbjct: 23 LIGYLIATG 31


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 3 VGFLISTG 10
VGF ISTG
Sbjct: 77 VGFGISTG 84


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILVGFLIST 9
+LVGFL +T
Sbjct: 100 VLVGFLWTT 108


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 3 VGFLISTG 10
VGF ISTG
Sbjct: 207 VGFGISTG 214


>sp|TRPA_METMA|TRYPTOPHAN synthase alpha chain|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VGFLISTG 10
VGF ISTG
Sbjct: 215 VGFGISTG 222


>sp|CDPAS_METM7|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C7 /

Query: 1 ILVGFLISTG 10
I++GFL+ TG
Sbjct: 91 IILGFLLGTG 100


>sp|TRPA_METAC|TRYPTOPHAN synthase alpha chain|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VGFLISTG 10
VGF ISTG
Sbjct: 216 VGFGISTG 223




98|SequenceR|495|486|VGIAEILVGF

>sp|Y1288_METJA|UNCHARACTERIZED protein MJ1288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGIAEILVGF 10
+G+AEI++G+
Sbjct: 64 IGMAEIIIGY 73


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VGIAEILVGF 10
+GIA+IL GF
Sbjct: 457 IGIAKILFGF 466


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 VGIAEILV 8
+GIAE+LV
Sbjct: 651 IGIAELLV 658


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 VGIAEILV 8
+GIAE+LV
Sbjct: 599 IGIAELLV 606


>sp|Y1457_METJA|UNCHARACTERIZED protein MJ1457|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GIAEILVGF 10
G+A ILVGF
Sbjct: 15 GLAFILVGF 23


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 1 VGIAEILV 8
+GIAE+LV
Sbjct: 591 IGIAELLV 598




99|SequenceR|500|491|GYFWAVGIAE

>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 1 GYFWAVGIAE 10
G FW+VG+ E
Sbjct: 283 GKFWSVGLNE 292


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YFWAV 6
YFWA+
Sbjct: 251 YFWAI 255


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 2 YFWAV 6
YFWA+
Sbjct: 251 YFWAI 255


>sp|PYRE_HYPBU|OROTATE phosphoribosyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GYFWAVGIA 9
G WA G+A
Sbjct: 74 GIIWATGLA 82


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 2 YFWAVGIAE 10
Y WA IAE
Sbjct: 137 YDWASAIAE 145


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FWAVGIAE 10
FWA+G E
Sbjct: 20 FWAIGERE 27


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GYFWAVG 7
G+ WAVG
Sbjct: 168 GHCWAVG 174


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GYFWAVG 7
G+ WAVG
Sbjct: 168 GHCWAVG 174


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GYFWAVG 7
G+ WAVG
Sbjct: 168 GHCWAVG 174


>sp|FEN_PYRAR|FLAP endonuclease 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GYFWAVG 7
G+ WAVG
Sbjct: 168 GHCWAVG 174


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GYFWAVG 7
G+ WAVG
Sbjct: 168 GHCWAVG 174


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YFWAVGIAE 10
YF+ +G+ E
Sbjct: 43 YFYVIGVDE 51


>sp|APGM_PYRFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GYFWAVGIA 9
GYF A+G+
Sbjct: 79 GYFEALGVG 87


>sp|HPCAS_METS5|3-HYDROXYPROPIONYL-COENZYME A synthetase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GYFWAVGIAE 10
GY W +G A+
Sbjct: 517 GYIWVLGRAD 526


>sp|Y1212_ARCFU|UNCHARACTERIZED protein AF_1212|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYFWAVGI 8
GYF A+G+
Sbjct: 35 GYFKALGV 42


>sp|SECF_METTH|PROTEIN-EXPORT membrane protein SecF|Methanothermobacter thermautotrophicus

Query: 3 FWAVGIA 9
+WA+G A
Sbjct: 131 YWAIGFA 137


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GYFWAVGIAE 10
GY W +G A+
Sbjct: 525 GYIWVLGRAD 534


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GYFWAVGIAE 10
GY W +G A+
Sbjct: 525 GYIWVLGRAD 534


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 3 FWAVGIAE 10
W +G+AE
Sbjct: 88 LWVLGVAE 95


>sp|HPCAS_SULTO|3-HYDROXYPROPIONYL-COENZYME A synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GYFWAVGIAE 10
GY W +G A+
Sbjct: 516 GYIWVMGRAD 525


>sp|TRUA_PYRAE|TRNA pseudouridine synthase A|Pyrobaculum aerophilum (strain ATCC

Query: 4 WAVGIAE 10
WA GIAE
Sbjct: 73 WAWGIAE 79


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 GYFWAVGIA 9
GY W G+A
Sbjct: 344 GYEWDEGVA 352




100|SequenceR|505|496|SFQGVGYFWA

>sp|BIOB_META3|BIOTIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FQGVGYFW 9
F G+GYF+
Sbjct: 4 FTGIGYFY 11


>sp|PANB_IGNH4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FQGVGYFW 9
F G GY+W
Sbjct: 256 FPGEGYYW 263


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 2 FQGVGYFWA 10
++G G FW+
Sbjct: 411 YEGTGRFWS 419


>sp|TYW2_METJA|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 2 FQGVGYF 8
F G+GYF
Sbjct: 104 FAGIGYF 110


>sp|Y1587_METJA|UNCHARACTERIZED protein MJ1587|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQGVGYFW 9
+ G+G FW
Sbjct: 11 YSGIGKFW 18


>sp|THPR_ARCFU|RNA 2',3'-cyclic phosphodiesterase|Archaeoglobus fulgidus (strain

Query: 1 SFQGVGYF 8
SF+GVG F
Sbjct: 71 SFEGVGAF 78


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 FQGVGYFW 9
F G YFW
Sbjct: 454 FPGYDYFW 461


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GVGYFWA 10
GVG +WA
Sbjct: 2123 GVGIYWA 2129


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SFQGVGYFW 9
+F GVG +W
Sbjct: 558 AFMGVGLYW 566


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain

Query: 6 GYFWA 10
GYFW+
Sbjct: 72 GYFWS 76


>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GVGYFW 9
GVG FW
Sbjct: 286 GVGAFW 291


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus

Query: 6 GYFWA 10
GYFW+
Sbjct: 72 GYFWS 76


>sp|ACYP_THEKO|ACYLPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 3 QGVGYFWA 10
QGVG+ W+
Sbjct: 15 QGVGFRWS 22


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 QGVGYFW 9
+GV Y+W
Sbjct: 203 RGVRYYW 209


>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei JF-1

Query: 1 SFQGVGYFW 9
SFQG + W
Sbjct: 149 SFQGEDFSW 157


>sp|YD3A_METJA|UNCHARACTERIZED protein MJ1333.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQGVGYFWA 10
F GVG F+A
Sbjct: 14 FYGVGTFFA 22


>sp|ACYP_PYRHO|ACYLPHOSPHATASE horikoshii (strain ATCC 700860

Query: 3 QGVGYFWA 10
QGVG+ W+
Sbjct: 15 QGVGFRWS 22


>sp|HTPX2_METAC|PROTEASE HtpX homolog 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SFQGVGYFWA 10
+F G+ YF++
Sbjct: 49 AFMGIQYFYS 58


>sp|ACYP_PYRFU|ACYLPHOSPHATASE furiosus (strain ATCC 43587

Query: 3 QGVGYFWA 10
QGVG+ W+
Sbjct: 15 QGVGFRWS 22


>sp|ACYP_PYRAB|ACYLPHOSPHATASE abyssi (strain GE5 /

Query: 3 QGVGYFWA 10
QGVG+ W+
Sbjct: 15 QGVGFRWS 22




101|SequenceR|510|501|QQIDDSFQGV

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 IDDSFQGV 10
+DDSF G+
Sbjct: 461 VDDSFAGI 468


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 DDSFQGV 10
DD+F+GV
Sbjct: 415 DDAFKGV 421




102|SequenceR|515|506|RQGTMQQIDD

>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RQGTMQQI 8
R+GTM++I
Sbjct: 75 RKGTMEEI 82


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 3 GTMQQIDD 10
GTM++I+D
Sbjct: 468 GTMKRIED 475




103|SequenceR|520|511|WYLSPRQGTM

>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YLSPRQGTM 10
YL+P QG M
Sbjct: 440 YLNPYQGAM 448


>sp|TFE_HYPBU|TRANSCRIPTION factor E|Hyperthermus butylicus (strain DSM 5456

Query: 1 WYLSPRQGT 9
+Y+ PR GT
Sbjct: 114 YYVCPRDGT 122


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 WYLSPRQGT 9
W++ PR GT
Sbjct: 301 WFVDPRVGT 309


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 WYLSPRQGTM 10
W+++P GT+
Sbjct: 322 WFINPDDGTI 331


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 200 ISPRQGML 207


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 200 ISPRQGML 207


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 200 ISPRQGML 207


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 197 ISPRQGVI 204


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 196 ISPRQGVI 203


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 199 ISPRQGVI 206


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 197 ISPRQGVI 204


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 197 ISPRQGVI 204


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 197 ISPRQGVI 204


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 197 ISPRQGVI 204


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 199 ISPRQGVI 206


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 199 ISPRQGVI 206


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LSPRQGTM 10
+SPRQG +
Sbjct: 194 ISPRQGVI 201


>sp|Y1582_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ1582|Methanocaldococcus jannaschii

Query: 2 YLSPRQGT 9
YLSP +GT
Sbjct: 201 YLSPIKGT 208


>sp|SECD_HALVD|PROTEIN-EXPORT membrane protein SecD|Haloferax volcanii (strain ATCC 29605

Query: 2 YLSPRQG 8
Y+SP QG
Sbjct: 356 YISPSQG 362


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YLSPRQGTM 10
Y +PR+GT+
Sbjct: 896 YDNPRRGTL 904


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 2 YLSPRQGTM 10
+L+P++GT+
Sbjct: 338 FLNPQKGTL 346


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 2 YLSPRQGTM 10
+L+P++GT+
Sbjct: 342 FLNPQKGTL 350


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YLSPRQGTM 10
Y +PR+GT+
Sbjct: 935 YDNPRRGTL 943


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 1 WYLSPRQGTM 10
W+ +P GT+
Sbjct: 321 WFYNPDDGTV 330




104|SequenceR|525|516|KWCLRWYLSP

>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 4 LRWYLSP 10
LRWYL+P
Sbjct: 155 LRWYLAP 161


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 WCLRWY 7
WC+ WY
Sbjct: 447 WCVEWY 452


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 WCLRWY 7
WC+ WY
Sbjct: 447 WCVEWY 452


>sp|CBIM2_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 WCLRWYL 8
WCL W+L
Sbjct: 12 WCLVWWL 18


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 WCLRWY 7
WC WY
Sbjct: 447 WCTEWY 452


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 WCLRWY 7
WC WY
Sbjct: 447 WCTEWY 452


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 WCLRWY 7
WC WY
Sbjct: 447 WCTEWY 452


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 1 KWCLRWY 7
+WCL W+
Sbjct: 11 QWCLFWF 17


>sp|CDPAS_STAMF|CDP-ARCHAEOL synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 WCLRWYLSP 10
W L++YLSP
Sbjct: 15 WFLKYYLSP 23


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 KWCLRW 6
KW LRW
Sbjct: 98 KWILRW 103


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 1 KWCLRW 6
KW LRW
Sbjct: 98 KWILRW 103


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 WCLRWY 7
WC WY
Sbjct: 452 WCEEWY 457


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 2 WCLRWYL 8
WC+ W++
Sbjct: 12 WCIVWFV 18


>sp|Y963_METKA|MEMO1 family protein MK0963|Methanopyrus kandleri (strain AV19 /

Query: 1 KWCLRWYLSP 10
+WC R L P
Sbjct: 24 EWCFRHELGP 33


>sp|HTPX1_SACS2|PROTEASE HtpX homolog 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WCLRWYLSP 10
W +W +SP
Sbjct: 48 WLFQWIISP 56


>sp|Y887_METTH|UPF0104 membrane protein MTH_887|Methanothermobacter thermautotrophicus

Query: 2 WCLRWYL 8
W LRW L
Sbjct: 69 WTLRWRL 75


>sp|HTPX1_SULAC|PROTEASE HtpX homolog 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 WCLRWYLSP 10
W ++W ++P
Sbjct: 48 WLIQWLIAP 56


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 WCLRWYL 8
WC W++
Sbjct: 420 WCEEWWI 426


>sp|SECF_METTH|PROTEIN-EXPORT membrane protein SecF|Methanothermobacter thermautotrophicus

Query: 4 LRWYL 8
LRWYL
Sbjct: 279 LRWYL 283


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 2 WCLRWYL 8
WCL +Y+
Sbjct: 12 WCLIYYI 18


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 WYLSP 10
WY+SP
Sbjct: 727 WYVSP 731


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 WCLRWY 7
WC W+
Sbjct: 428 WCEEWW 433


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 CLRWYL 8
CLR+YL
Sbjct: 350 CLRYYL 355


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 4 LRWYLSP 10
+ WYL+P
Sbjct: 206 IEWYLTP 212


>sp|RNH2_PYRAB|RIBONUCLEASE HII|Pyrococcus abyssi (strain GE5 /

Query: 1 KWCLRWY 7
KW WY
Sbjct: 178 KWLEEWY 184


>sp|RNP3_PYRAB|RIBONUCLEASE P protein component 3|Pyrococcus abyssi (strain GE5 /

Query: 1 KWCLRW 6
KW +RW
Sbjct: 173 KWHIRW 178


>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 1 KWCLRWYL 8
+W + WY+
Sbjct: 11 EWAIVWYI 18




105|SequenceR|530|521|CPSVLKWCLR

>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 CPSVLK 6
CPSVLK
Sbjct: 252 CPSVLK 257


>sp|UPPS_METKA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanopyrus

Query: 4 VLKWCL 9
VL+WCL
Sbjct: 77 VLEWCL 82


>sp|Y1989_PYRHO|UPF0104 membrane protein PH1989|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CPSVLKWCLR 10
C SVL W +R
Sbjct: 46 CISVLIWAVR 55


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 CPSVLKW 7
CP++++W
Sbjct: 145 CPTLIEW 151


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 2 PSVLKWCL 9
P V+KW L
Sbjct: 12 PDVVKWAL 19


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VLKWC 8
+LKWC
Sbjct: 213 ILKWC 217


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 LKWCLR 10
++WCLR
Sbjct: 217 VEWCLR 222


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 SVLKWCLR 10
+VL WC R
Sbjct: 116 AVLHWCPR 123


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 SVLKWCLR 10
+VL WC R
Sbjct: 179 AVLHWCPR 186


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 SVLKWCLR 10
+VL WC R
Sbjct: 179 AVLHWCPR 186


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 VLKWCLR 10
VL WC R
Sbjct: 177 VLHWCSR 183


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 CPSVLKWCLR 10
CP + +C R
Sbjct: 338 CPQICVYCQR 347


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 CPSVLKWCLR 10
CP + + C+R
Sbjct: 134 CPELRELCIR 143




106|SequenceR|535|526|VFLLFCPSVL

>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 VFLLFCPSVL 10
+F+ +CPSVL
Sbjct: 247 LFINYCPSVL 256


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLLFCPSV 9
F FCPSV
Sbjct: 489 FQPFCPSV 496


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 VFLLFCPSV 9
VFLLF P +
Sbjct: 65 VFLLFSPEM 73


>sp|PYRI_HALWD|ASPARTATE carbamoyltransferase regulatory chain|Haloquadratum walsbyi (strain

Query: 3 LLFCPS 8
LLFCP+
Sbjct: 130 LLFCPN 135


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 4 LFCPSV 9
LFCP+V
Sbjct: 92 LFCPTV 97


>sp|GGGPS_METPE|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaerula palustris (strain ATCC

Query: 3 LLFCPSVL 10
LLF PSV+
Sbjct: 80 LLFVPSVM 87




107|SequenceR|540|531|ISVVVVFLLF

>sp|Y129_METJA|UNCHARACTERIZED protein MJ0129|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISVVVVFLLF 10
ISV+VV LLF
Sbjct: 144 ISVIVVMLLF 153




108|SequenceR|545|536|PRFTVISVVV

>sp|CDPAS_METPE|CDP-ARCHAEOL synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PRFTVISVVV 10
PR TV+SV++
Sbjct: 69 PRHTVLSVLL 78


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RFTVISVVV 10
RF V++V+V
Sbjct: 306 RFAVVAVIV 314




109|SequenceR|550|541|AGYHPPRFTV

>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 GYHPPRFT 9
G HPP+FT
Sbjct: 250 GIHPPQFT 257


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 4 HPPRFTV 10
HPPRF V
Sbjct: 389 HPPRFIV 395


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGYHPPRF 8
A Y+PPRF
Sbjct: 189 AIYYPPRF 196


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 GYHPPRFT 9
GYH P+FT
Sbjct: 191 GYHDPKFT 198


>sp|Y1582_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ1582|Methanocaldococcus jannaschii

Query: 2 GYHPPR 7
GYHP R
Sbjct: 63 GYHPSR 68


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GYHPPR 7
G HPPR
Sbjct: 106 GSHPPR 111


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AGYHPPRFTV 10
AGY PP V
Sbjct: 305 AGYQPPTAVV 314


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 1 AGYHPPRFTV 10
GY PP + V
Sbjct: 253 GGYRPPMYRV 262


>sp|RS6E_PYRNV|SMALL ribosomal subunit protein eS6|Pyrobaculum neutrophilum (strain

Query: 2 GYHPPR 7
GYHPP+
Sbjct: 87 GYHPPK 92


>sp|LYSK_PYRAB|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus abyssi (strain

Query: 2 GYHPPR 7
GY PPR
Sbjct: 225 GYEPPR 230


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AGYHPPRFTV 10
AGY+P +TV
Sbjct: 283 AGYYPSGYTV 292


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 AGYHPPRFTV 10
AGY+P +TV
Sbjct: 283 AGYYPSGYTV 292


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AGYHPPRF 8
AG+HP F
Sbjct: 373 AGFHPDLF 380


>sp|NOP10_IGNH4|RIBOSOME biogenesis protein Nop10|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 31 HPPRFS 36


>sp|NOP10_PYRAE|RIBOSOME biogenesis protein Nop10|Pyrobaculum aerophilum (strain ATCC

Query: 4 HPPRFT 9
HPP+F+
Sbjct: 32 HPPKFS 37


>sp|NOP10_PYRAB|RIBOSOME biogenesis protein Nop10|Pyrococcus abyssi (strain GE5 /

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 31 HPPRFS 36


>sp|NOP10_PYRFU|RIBOSOME biogenesis protein Nop10|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 31 HPPRFS 36


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AGYHPPRFT 9
AGY+PP T
Sbjct: 503 AGYYPPWVT 511


>sp|NOP10_THEGJ|RIBOSOME biogenesis protein Nop10|Thermococcus gammatolerans (strain DSM

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 31 HPPRFS 36


>sp|NOP10_THEON|RIBOSOME biogenesis protein Nop10|Thermococcus onnurineus (strain NA1)

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 31 HPPRFS 36


>sp|MTRD_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 2 GYHPPRF 8
G+H P+F
Sbjct: 213 GFHDPKF 219


>sp|MTRD_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanosarcina barkeri (strain Fusaro

Query: 2 GYHPPRF 8
G+H P+F
Sbjct: 213 GFHDPKF 219


>sp|NOP10_THEKO|RIBOSOME biogenesis protein Nop10|Thermococcus kodakarensis (strain ATCC

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 31 HPPRFS 36


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 GYHPP 6
G+HPP
Sbjct: 414 GHHPP 418


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 GYHPPRFT 9
GY P RF+
Sbjct: 733 GYRPGRFS 740


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 GYHPP 6
G+HPP
Sbjct: 137 GWHPP 141


>sp|NOP10_STAMF|RIBOSOME biogenesis protein Nop10|Staphylothermus marinus (strain ATCC

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 32 HPPRFS 37


>sp|MTRD_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter marburgensis

Query: 2 GYHPPRF 8
G+H P+F
Sbjct: 197 GFHDPKF 203


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AGYHP 5
AGYHP
Sbjct: 179 AGYHP 183


>sp|EHAA_METKA|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex membrane|Methanopyrus

Query: 2 GYHPP 6
GYHPP
Sbjct: 62 GYHPP 66


>sp|MTRD_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanothermobacter

Query: 2 GYHPPRF 8
G+H P+F
Sbjct: 197 GFHDPKF 203


>sp|NOP10_DESA1|RIBOSOME biogenesis protein Nop10|Desulfurococcus amylolyticus (strain DSM

Query: 4 HPPRFT 9
HPPRF+
Sbjct: 32 HPPRFS 37


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 GYHPPR 7
GY+PP+
Sbjct: 224 GYNPPK 229


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 2 GYHPPRFTV 10
G HPP +
Sbjct: 156 GIHPPNIVI 164


>sp|MTRD_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 2 GYHPPRF 8
G+H P+F
Sbjct: 201 GFHDPKF 207


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GYHPPRFT 9
G HPP T
Sbjct: 216 GMHPPAMT 223


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 2 GYHPPRF 8
G+H P+F
Sbjct: 198 GFHDPKF 204




110|SequenceR|555|546|DPFIYAGYHP

>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DPFIYAGYHP 10
+P +Y GY P
Sbjct: 29 EPVVYTGYEP 38


>sp|RS13_THEKO|SMALL ribosomal subunit protein uS13|Thermococcus kodakarensis (strain

Query: 1 DPFIYAGY 8
DPF+ AGY
Sbjct: 47 DPFMKAGY 54


>sp|RS13_PYRHO|SMALL ribosomal subunit protein uS13|Pyrococcus horikoshii (strain ATCC

Query: 1 DPFIYAGY 8
DPF+ AGY
Sbjct: 46 DPFMKAGY 53


>sp|RS13_PYRFU|SMALL ribosomal subunit protein uS13|Pyrococcus furiosus (strain ATCC

Query: 1 DPFIYAGY 8
DPF+ AGY
Sbjct: 46 DPFMKAGY 53


>sp|RS13_PYRAB|SMALL ribosomal subunit protein uS13|Pyrococcus abyssi (strain GE5 /

Query: 1 DPFIYAGY 8
DPF+ AGY
Sbjct: 46 DPFMKAGY 53


>sp|SYFB_METTH|PHENYLALANINE--TRNA ligase beta subunit|Methanothermobacter thermautotrophicus (strain

Query: 2 PFIYAGYHP 10
PF+Y+G P
Sbjct: 147 PFLYSGVEP 155


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 IYAGYHP 10
+YA YHP
Sbjct: 191 VYASYHP 197


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DPFIYAGYHP 10
D IY G HP
Sbjct: 163 DGLIYQGVHP 172


>sp|SYY_METS3|TYROSINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PFIYAGYHP 10
P Y GY P
Sbjct: 32 PIAYTGYEP 40


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 IYAGYHP 10
+YAGY P
Sbjct: 31 VYAGYEP 37


>sp|MDH_METTM|MALATE dehydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 5 YAGYHP 10
Y+G+HP
Sbjct: 134 YSGFHP 139


>sp|MDH_METTH|MALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 YAGYHP 10
Y+G+HP
Sbjct: 134 YSGFHP 139


>sp|CDC62_ARCFU|ORC1-TYPE DNA replication protein 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DPFIYAGYH 9
DPF+ A +H
Sbjct: 192 DPFVGASFH 200


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DPFIYAGYHP 10
DP Y GY P
Sbjct: 31 DPSAYIGYAP 40


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 2 PFIYAGYHP 10
P +YA Y P
Sbjct: 69 PKVYAAYSP 77


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus

Query: 2 PFIYAGYHP 10
P +YA Y P
Sbjct: 69 PKVYAAYSP 77


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 2 PFIYAGYHP 10
PF+Y Y P
Sbjct: 270 PFLYKWYSP 278


>sp|HIS7_METM6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 PFIYAGYHP 10
P++ GY P
Sbjct: 111 PYVVGGYTP 119


>sp|Y523_METJA|UNCHARACTERIZED protein MJ0523|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IYAGYHP 10
IY+ YHP
Sbjct: 8 IYSIYHP 14


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FIYAGYHP 10
IY YHP
Sbjct: 162 LIYRDYHP 169


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DPFIYAGYH 9
D Y+GYH
Sbjct: 611 DWLTYSGYH 619


>sp|SYY_METMA|TYROSINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PFIYAGYHP 10
P Y GY P
Sbjct: 30 PRAYVGYEP 38


>sp|SYY_METBF|TYROSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PFIYAGYHP 10
P Y GY P
Sbjct: 30 PRAYVGYEP 38


>sp|SYY_METAC|TYROSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PFIYAGYHP 10
P Y GY P
Sbjct: 30 PRAYVGYEP 38


>sp|SYY_ARCFU|TYROSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PFIYAGYHP 10
P Y GY P
Sbjct: 33 PRAYVGYEP 41


>sp|SYY_METBU|TYROSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 PFIYAGYHP 10
P Y GY P
Sbjct: 30 PSAYTGYEP 38


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 FIYAGYHP 10
+IY G HP
Sbjct: 139 YIYRGAHP 146


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FIYAGYH 9
+ YAGYH
Sbjct: 1048 YTYAGYH 1054


>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DPFIYAGYHP 10
DPF Y P
Sbjct: 44 DPFFQMSYSP 53


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 4 IYAGYH 9
++AGYH
Sbjct: 121 VHAGYH 126


>sp|SYY_METMJ|TYROSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 IYAGYHP 10
+Y GY P
Sbjct: 31 VYTGYEP 37


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 4 IYAGYH 9
++AGYH
Sbjct: 121 VHAGYH 126


>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 IYAGYHP 10
+Y GY P
Sbjct: 31 VYTGYEP 37


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 IYAGYHP 10
+Y GY P
Sbjct: 32 VYVGYEP 38


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 IYAGYHP 10
+Y GY P
Sbjct: 32 VYVGYEP 38




111|SequenceR|560|551|LANAWDPFIY

>sp|RPO10_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus shibatae (strain ATCC

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo10|Saccharolobus islandicus (strain

Query: 1 LANAWDPFI 9
+A+ W PFI
Sbjct: 14 IADKWQPFI 22


>sp|RPO10_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfurisphaera tokodaii (strain DSM

Query: 1 LANAWDPFI 9
+ + W+PFI
Sbjct: 14 IGDKWEPFI 22


>sp|RPO10_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo10|Sulfolobus acidocaldarius (strain

Query: 1 LANAWDPF 8
+A+ W+PF
Sbjct: 14 VADKWEPF 21


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 LANAWDPFI 9
A WDP I
Sbjct: 426 FAPVWDPLI 434


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 LANAWDPFI 9
A WDP I
Sbjct: 426 FAPVWDPLI 434


>sp|Y61A_METJA|UNCHARACTERIZED protein MJ0611.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LANAWDPF 8
L N W PF
Sbjct: 6 LGNCWTPF 13


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 LANAWDPFI 9
A WDP I
Sbjct: 429 FAPVWDPLI 437


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NAWDPFIY 10
N WDP Y
Sbjct: 95 NVWDPIKY 102


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WDPFIY 10
WD F+Y
Sbjct: 132 WDTFLY 137


>sp|UPPP_SULTO|UNDECAPRENYL-DIPHOSPHATASE tokodaii (strain DSM 16993

Query: 1 LANAWDPFI 9
L NA+DP I
Sbjct: 100 LKNAYDPSI 108


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LANAWDP 7
LAN W P
Sbjct: 146 LANIWTP 152


>sp|RPO10_CALMQ|DNA-DIRECTED RNA polymerase subunit Rpo10|Caldivirga maquilingensis (strain

Query: 1 LANAWDPF 8
L + W+PF
Sbjct: 14 LGHLWEPF 21


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AWDPFIY 10
W P+IY
Sbjct: 397 GWQPYIY 403




112|SequenceR|565|556|AIVWGLANAW

>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 WGLANAW 10
WGL N W
Sbjct: 646 WGLKNVW 652


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 VWGLANAW 10
V+G+ NAW
Sbjct: 238 VFGVTNAW 245


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VWGLANAW 10
++G+ NAW
Sbjct: 244 IYGVVNAW 251


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VWGLANAW 10
V+G+ NAW
Sbjct: 241 VFGVTNAW 248


>sp|DTDA_HYPBU|D-AMINOACYL-TRNA deacylase|Hyperthermus butylicus (strain DSM 5456

Query: 4 WGLANAW 10
W LA AW
Sbjct: 102 WSLAPAW 108


>sp|GATD_HALSA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 2 IVWGLANA 9
++W LANA
Sbjct: 396 LMWALANA 403


>sp|GATD_HALS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Halobacterium salinarum (strain ATCC

Query: 2 IVWGLANA 9
++W LANA
Sbjct: 396 LMWALANA 403


>sp|LEUC_THEKO|3-ISOPROPYLMALATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 AIVWGLANAW 10
A+V GL W
Sbjct: 130 AVVMGLGKTW 139


>sp|R1PKD_THEKO|ADP-DEPENDENT ribose-1-phosphate kinase|Thermococcus kodakarensis (strain ATCC

Query: 1 AIVWGLANAW 10
+++G+ N W
Sbjct: 237 GVIYGVLNGW 246


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AIVWGLANAW 10
A+V GL W
Sbjct: 130 AVVLGLGKTW 139


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GLANAW 10
G+AN+W
Sbjct: 35 GIANSW 40


>sp|RS11_NATPD|SMALL ribosomal subunit protein uS11|Natronomonas pharaonis (strain

Query: 4 WGLANAW 10
WG+AN +
Sbjct: 7 WGIANVY 13


>sp|PDXT_KORCO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Korarchaeum cryptofilum (strain

Query: 3 VWGLANA 9
+WG ANA
Sbjct: 150 IWGKANA 156


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AIVWGLANAW 10
A +W L AW
Sbjct: 674 AAIWTLYTAW 683




113|SequenceR|570|561|AMSSTAIVWG

>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AMSSTAI 7
AMSSTAI
Sbjct: 122 AMSSTAI 128


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AMSSTAIVW 9
A SST+I W
Sbjct: 669 ANSSTSIAW 677


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 1 AMSSTAIVWG 10
A+ TAI+WG
Sbjct: 258 ALIGTAIMWG 267




114|SequenceR|575|566|YIPVMAMSST

>sp|Y297_METJA|UNCHARACTERIZED protein MJ0297|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IPVMAMSST 10
IP+MAM+ T
Sbjct: 211 IPLMAMNFT 219


>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 YIPVMAM 7
Y+PVMA+
Sbjct: 35 YVPVMAV 41


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain

Query: 1 YIPVMAM 7
Y+PVMA+
Sbjct: 35 YVPVMAV 41


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain

Query: 1 YIPVMAM 7
Y+P+MA+
Sbjct: 35 YVPIMAV 41




115|SequenceR|580|571|FKYAAYIPVM

>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FKYAAYIPV 9
F+Y++++P+
Sbjct: 50 FRYSSWLPI 58


>sp|RL4_PYRHO|LARGE ribosomal subunit protein uL4|Pyrococcus horikoshii (strain ATCC

Query: 2 KYAAYIP 8
+YAA++P
Sbjct: 78 RYAAFVP 84


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 2 KYAAYIP 8
+YAA++P
Sbjct: 78 RYAAFVP 84


>sp|RL4_PYRAB|LARGE ribosomal subunit protein uL4|Pyrococcus abyssi (strain GE5 /

Query: 2 KYAAYIP 8
+YAA++P
Sbjct: 78 RYAAFVP 84


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 2 KYAAYIP 8
KY AY+P
Sbjct: 360 KYLAYLP 366


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FKYAAYIP 8
F Y AYIP
Sbjct: 170 FAYNAYIP 177


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 FKYAAYIPV 9
F+Y +++PV
Sbjct: 50 FRYESWLPV 58


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 FKYAAYIP 8
KY YIP
Sbjct: 479 LKYGGYIP 486


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FKYAAYIPV 9
FKY ++PV
Sbjct: 49 FKYMDWLPV 57




116|SequenceR|585|576|GPLSCFKYAA

>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GPLSCFKYAA 10
GP +C+ Y A
Sbjct: 57 GPTACYSYKA 66


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PLSCFKY 8
PLSCF Y
Sbjct: 295 PLSCFFY 301


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 2 PLSCFKYA 9
PLSC KY+
Sbjct: 56 PLSCKKYS 63


>sp|PGP_THESM|PHOSPHOGLYCOLATE phosphatase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GPLSCFKYAA 10
G +CF YAA
Sbjct: 43 GNSACFAYAA 52


>sp|Y1511_METMJ|UPF0316 protein Memar_1511|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PLSCFKYAA 10
PL+ F YAA
Sbjct: 73 PLNYFAYAA 81


>sp|TSR3_METJA|16S rRNA aminocarboxypropyltransferase|Methanocaldococcus jannaschii

Query: 4 SCFKYA 9
SCFK+A
Sbjct: 134 SCFKWA 139




117|SequenceR|590|581|KERFSGPLSC

>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 2 ERFSGPL 8
ERF+GPL
Sbjct: 53 ERFAGPL 59


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum

Query: 2 ERFSGPL 8
E+FSGPL
Sbjct: 54 EKFSGPL 60


>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 KERFSGPLS 9
+ERFS PL+
Sbjct: 266 RERFSVPLA 274


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis

Query: 2 ERFSGPL 8
E+F+GPL
Sbjct: 55 EKFAGPL 61


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 2 ERFSGPL 8
E+F+GPL
Sbjct: 54 EKFAGPL 60


>sp|Y1004_METJA|UNCHARACTERIZED protein MJ1004|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KERFSGPL 8
K+RFS P+
Sbjct: 30 KKRFSAPI 37




118|SequenceR|595|586|IAYALKERFS

>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 IAYALKER 8
I YALKER
Sbjct: 354 IEYALKER 361


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IAYALKER 8
I YALKER
Sbjct: 354 IEYALKER 361


>sp|BIOB_METM5|BIOTIN synthase|Methanococcus maripaludis (strain C5 /

Query: 1 IAYALKERFS 10
I+YALK+ F+
Sbjct: 41 ISYALKKLFN 50


>sp|SURE_METJA|5'-NUCLEOTIDASE SurE|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ALKERFS 10
ALKE+FS
Sbjct: 22 ALKEKFS 28


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IAYALKERF 9
+AY LK+ F
Sbjct: 133 VAYMLKQNF 141




119|SequenceR|600|591|DKEPAIAYAL

>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEPAIAYA 9
K+P IAYA
Sbjct: 13 KKPKIAYA 20


>sp|RL5_ARCFU|LARGE ribosomal subunit protein uL5|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKEPAIAYA 9
+++PAI YA
Sbjct: 49 EQKPAITYA 57


>sp|SURE_METLZ|5'-NUCLEOTIDASE SurE|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PAIAYAL 10
PAIAY+L
Sbjct: 124 PAIAYSL 130


>sp|GGGPS_THEVO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DKEPAIAYAL 10
D+E A++Y+L
Sbjct: 150 DRETALSYSL 159


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DKEPAIAYAL 10
DKE A +YAL
Sbjct: 144 DKELAASYAL 153


>sp|PRIL_METMA|DNA primase large subunit PriL|Methanosarcina mazei (strain ATCC

Query: 4 PAIAYAL 10
P IAYAL
Sbjct: 229 PCIAYAL 235


>sp|THIO_METTH|PROBABLE Thioredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DKEPAIAYAL 10
D+E AI Y L
Sbjct: 44 DREKAIEYGL 53


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DKEPAIAYAL 10
D+E A+ YA+
Sbjct: 164 DREGAVEYAM 173




120|SequenceR|605|596|DVLERDKEPA

>sp|DHE4_HALSI|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (Halobacterium

Query: 1 DVLERDKEP 9
DVLER K P
Sbjct: 26 DVLERLKHP 34


>sp|DHE4_HALSA|NADP-SPECIFIC glutamate dehydrogenase A1|Halobacterium salinarum (strain ATCC

Query: 1 DVLERDKEP 9
DVLER K P
Sbjct: 26 DVLERLKHP 34


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DVLERDKE 8
D+LERDK+
Sbjct: 60 DLLERDKD 67


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLERDKEP 9
++ERD+EP
Sbjct: 846 LIERDQEP 853


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 DVLERDKEPA 10
DV+ D+EP
Sbjct: 101 DVVSSDREPG 110


>sp|THSB_HALSA|THERMOSOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVLERDKEP 9
D+LERD P
Sbjct: 116 DLLERDIHP 124


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DVLERDKEPA 10
D+L RD+E A
Sbjct: 462 DLLRRDRESA 471


>sp|DTDA_METLZ|D-AMINOACYL-TRNA deacylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DVLERDKEPA 10
D+L D +PA
Sbjct: 4 DILNSDSDPA 13


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain

Query: 1 DVLERDKEP 9
D+L + KEP
Sbjct: 16 DILSKSKEP 24




121|SequenceR|610|601|RVEGRDVLER

>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 2 VEGRDVLER 10
+EGRDVL R
Sbjct: 163 IEGRDVLFR 171


>sp|TRUB_PYRFU|PROBABLE tRNA pseudouridine synthase B|Pyrococcus furiosus (strain ATCC

Query: 2 VEGRDVLER 10
+EGRDVL R
Sbjct: 163 IEGRDVLFR 171


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 2 VEGRDVLER 10
+EGRDVL R
Sbjct: 163 IEGRDVLFR 171


>sp|AIPS_SACS2|ARCHAETIDYLINOSITOL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVEGRDVLER 10
++EGR ++ER
Sbjct: 136 KMEGRGIIER 145


>sp|PHNC1_NATPD|PHOSPHONATES import ATP-binding protein PhnC|Natronomonas pharaonis (strain ATCC

Query: 4 GRDVLER 10
GRDVLER
Sbjct: 170 GRDVLER 176


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 3 EGRDVLER 10
E RDVLER
Sbjct: 277 EARDVLER 284


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 2 VEGRDVLER 10
+EGRDVL R
Sbjct: 150 MEGRDVLFR 158


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EGRDVLE 9
+GRDVLE
Sbjct: 254 KGRDVLE 260


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 VEGRDVLER 10
V RDVLER
Sbjct: 103 VPKRDVLER 111


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 1 RVEGRDVL 8
+ EGRDVL
Sbjct: 380 KTEGRDVL 387


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 3 EGRDVLE 9
EGRD+LE
Sbjct: 396 EGRDLLE 402


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 2 VEGRDVLER 10
++GRDVL R
Sbjct: 161 IDGRDVLMR 169


>sp|KPRS2_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VEGRDVL 8
VEGRDV+
Sbjct: 190 VEGRDVV 196


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 VEGRDVLE 9
V G+DVLE
Sbjct: 565 VSGKDVLE 572


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 2 VEGRDVLER 10
++GRDVL R
Sbjct: 163 IDGRDVLFR 171


>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 VEGRDVL 8
V+GRDVL
Sbjct: 34 VDGRDVL 40


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 GRDVLER 10
GRD LER
Sbjct: 69 GRDALER 75


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 1 RVEGRDVLER 10
R+EG+D +E+
Sbjct: 218 RIEGKDRVEK 227


>sp|Y295_ARCFU|UNCHARACTERIZED protein AF_0295|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVEGRDVLER 10
++EG+ LER
Sbjct: 31 KIEGKKTLER 40




122|SequenceR|620|606|VKLWHRLTFQRVEGR

>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 WHRLTFQRVEG 14
W R TFQ+V G
Sbjct: 304 WVRETFQKVMG 314


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VKLWHRLTFQR 11
VK+WH+ +R
Sbjct: 189 VKMWHKWPVRR 199


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VKLWHRLTFQR 11
VK+WH+ +R
Sbjct: 189 VKMWHKWPVRR 199


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VKLWHRLTFQR 11
VK+WH+ +R
Sbjct: 189 VKMWHKWPVRR 199


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VKLWHRLTFQR 11
VK+WH+ +R
Sbjct: 189 VKMWHKWPVRR 199


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VKLWHRLTFQR 11
VK+WH+ +R
Sbjct: 189 VKMWHKWPVRR 199


>sp|AROD_META3|3-DEHYDROQUINATE dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VKLWHRLTFQRVEGR 15
V+L LTF +EGR
Sbjct: 184 VELGSILTFASMEGR 198


>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KLWHRLTFQRVEG 14
+++HRLT + V+
Sbjct: 222 EIFHRLTLKNVDA 234


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 VKLWHRLTFQRVEGR 15
+++W ++ +R EG+
Sbjct: 52 IEIWKKVEKRRAEGK 66


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KLWHRLTFQRVEG 14
++W + +RVEG
Sbjct: 496 RVWIKWAVKRVEG 508


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 HRLTFQRV 12
+R+TFQR+
Sbjct: 217 NRVTFQRI 224


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 VKLWHRLTFQR 11
VKL+ L+F+R
Sbjct: 9 VKLFDELSFER 19


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 5 HRLTFQRVEGR 15
HR++F+ GR
Sbjct: 184 HRISFELSSGR 194


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 KLWHRLTFQ 10
++W RLTF
Sbjct: 287 RVWDRLTFD 295


>sp|RS19_METTP|SMALL ribosomal subunit protein uS19|Methanothrix thermoacetophila

Query: 1 VKLWHRLTFQRVE 13
V++ + TFQRVE
Sbjct: 85 VEIHNGKTFQRVE 97


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LWHRLTFQRVE 13
+W +TF+ VE
Sbjct: 379 IWGNVTFRLVE 389


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 4 WHRLTFQ 10
WH + FQ
Sbjct: 133 WHNIVFQ 139




123|SequenceR|620|611|VKLWHRLTFQ

>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 KLWHRLTF 9
++W RLTF
Sbjct: 287 RVWDRLTF 294


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VKLWHR 6
VK+WH+
Sbjct: 189 VKMWHK 194


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VKLWHR 6
VK+WH+
Sbjct: 189 VKMWHK 194


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VKLWHR 6
VK+WH+
Sbjct: 189 VKMWHK 194


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VKLWHR 6
VK+WH+
Sbjct: 189 VKMWHK 194


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VKLWHR 6
VK+WH+
Sbjct: 189 VKMWHK 194


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KLWHRL 7
+LWH+L
Sbjct: 773 ELWHKL 778


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VKLWHRLT 8
VKL HR+T
Sbjct: 163 VKLEHRIT 170


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KLWHRLTF 9
++WH L F
Sbjct: 854 EMWHELGF 861


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 4 WHRLTFQ 10
WH + FQ
Sbjct: 133 WHNIVFQ 139




THE END