SAP_HUMAN Blast Output
Archaea
1|Sequence|1|10|MYALFLLASL

***** No hits found ******


2|Sequence|6|15|LLASLLGAAL

>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 LLASLLGAAL 10
+LASLLG +
Sbjct: 17 ILASLLGVGI 26




3|Sequence|11|20|LGAALAGPVL

>sp|GGR_THEGJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LGAALAGPVL 10
+GA +AGP++
Sbjct: 10 VGAGIAGPIV 19


>sp|ASSY_NATPD|ARGININOSUCCINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LGAALAGPVL 10
LG ALA PV+
Sbjct: 89 LGTALARPVI 98


>sp|ASSY_HALMA|ARGININOSUCCINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGAALAGPVL 10
LG ALA PV+
Sbjct: 90 LGTALARPVI 99


>sp|MTRA_METST|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosphaera stadtmanae (strain

Query: 2 GAALAGPV 9
GAA++GP+
Sbjct: 44 GAAISGPL 51


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LGAALAGPVL 10
LG ALA P++
Sbjct: 86 LGTALARPII 95


>sp|Y1755_ARCFU|UNCHARACTERIZED membrane protein AF_1755|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGAALAGPVL 10
+ AALAGP+L
Sbjct: 204 IAAALAGPLL 213


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii

Query: 2 GAALAGP 8
GAA+AGP
Sbjct: 45 GAAIAGP 51


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGAALAGPVL 10
+G+ +AGP++
Sbjct: 10 VGSGIAGPIV 19


>sp|ASSY_HALSA|ARGININOSUCCINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGAALAGPVL 10
LG ALA PV+
Sbjct: 88 LGTALARPVI 97


>sp|MTRA1_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter marburgensis

Query: 2 GAALAGP 8
GAA+AGP
Sbjct: 44 GAAIAGP 50


>sp|MTRA1_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 1|Methanothermobacter

Query: 2 GAALAGP 8
GAA+AGP
Sbjct: 44 GAAIAGP 50


>sp|MTRA2_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter marburgensis

Query: 2 GAALAGPV 9
GAA++GP+
Sbjct: 48 GAAISGPL 55


>sp|Y1792_ARCFU|UNCHARACTERIZED protein AF_1792|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGAALAGPVL 10
+GAAL+G V+
Sbjct: 91 IGAALSGAVM 100


>sp|MTRA_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain

Query: 2 GAALAGP 8
GAAL+GP
Sbjct: 45 GAALSGP 51


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 2 GAALAGPV 9
GAA++GP+
Sbjct: 47 GAAISGPL 54




4|Sequence|16|25|AGPVLGLKEC

>sp|AMZA_ARCFU|ARCHAEMETZINCIN fulgidus (strain ATCC 49558

Query: 2 GPVLGLKEC 10
G VLGLK C
Sbjct: 120 GHVLGLKHC 128


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AGPVLGLKE 9
+GPV GLK+
Sbjct: 38 SGPVAGLKD 46


>sp|COFD_METVS|2-PHOSPHO-L-LACTATE transferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GPVLGLKE 9
GP+L +KE
Sbjct: 205 GPILSIKE 212


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 3 PVLGLKEC 10
PVL L++C
Sbjct: 333 PVLTLRQC 340


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 GPVLGL 7
GP+LGL
Sbjct: 185 GPILGL 190


>sp|TATC_CENSY|SEC-INDEPENDENT protein translocase protein TatC|Cenarchaeum symbiosum (strain A)

Query: 1 AGPVLGL 7
AGP++GL
Sbjct: 238 AGPMIGL 244


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AGPVLGLK 8
AGP GLK
Sbjct: 300 AGPYAGLK 307


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGPVLGLK 8
AGP GLK
Sbjct: 300 AGPYAGLK 307


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AGPVLGLK 8
AGP GLK
Sbjct: 300 AGPYAGLK 307


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 AGPVLGLK 8
AGP GLK
Sbjct: 300 AGPYAGLK 307


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 AGPVLG 6
AGPVLG
Sbjct: 112 AGPVLG 117


>sp|ASPD_METVS|L-ASPARTATE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 3 PVLGLKEC 10
PV+GLK+
Sbjct: 149 PVMGLKDA 156


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GPVLGLK 8
GPVLG++
Sbjct: 4 GPVLGIE 10




5|Sequence|21|30|GLKECTRGSA

>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 LKECTRGSA 10
+EC RG A
Sbjct: 490 FRECVRGMA 498


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 2 LKECTRGSA 10
+EC RG A
Sbjct: 490 FRECVRGMA 498




6|Sequence|26|35|TRGSAVWCQN

>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 4 SAVWCQ 9
S +WCQ
Sbjct: 58 SVIWCQ 63


>sp|AATE_SULAC|A-TYPE ATP synthase subunit E|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TRGSAVWCQN 10
T G+ V+C N
Sbjct: 116 TEGAIVYCSN 125




7|Sequence|31|40|VWCQNVKTAS

>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WCQNV 6
WC+NV
Sbjct: 26 WCRNV 30


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 WCQNV 6
WC+NV
Sbjct: 48 WCRNV 52


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 WCQNV 6
WC+NV
Sbjct: 48 WCRNV 52


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 WCQNV 6
WC+NV
Sbjct: 48 WCRNV 52


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 VWCQNVKT 8
VW N++T
Sbjct: 388 VWSNNIRT 395




8|Sequence|36|45|VKTASDCGAV

>sp|GGPPS_GEOAI|GERANYLGERANYL pyrophosphate synthase|Geoglobus acetivorans

Query: 1 VKTASDCGAV 10
+K DCGAV
Sbjct: 268 IKKLFDCGAV 277


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 VKTASDCG 8
+KTASD G
Sbjct: 134 IKTASDLG 141


>sp|AKSA_METKA|HOMOCITRATE synthase AksA|Methanopyrus kandleri (strain AV19 /

Query: 2 KTASDCGA 9
+TA +CGA
Sbjct: 166 RTAEECGA 173


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKTASDCGA 9
VKTA D GA
Sbjct: 159 VKTAIDAGA 167


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 5 SDCGAV 10
+DCGAV
Sbjct: 37 ADCGAV 42


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 5 SDCGAV 10
+DCGAV
Sbjct: 31 ADCGAV 36


>sp|TPIS_METLZ|TRIOSEPHOSPHATE isomerase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VKTASDCGA 9
VKTA D GA
Sbjct: 187 VKTAVDLGA 195


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 ASDCGAV 10
A+DCGAV
Sbjct: 118 ANDCGAV 124




9|Sequence|41|50|DCGAVKHCLQ

>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DCGAVKHCLQ 10
DC AV H L+
Sbjct: 63 DCPAVDHLLE 72


>sp|COFC_METBU|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DCGAVKHC 8
DC + HC
Sbjct: 140 DCSFISHC 147


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DCGAVKHCLQ 10
D GA + CLQ
Sbjct: 105 DAGATEVCLQ 114


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GAVKHCL 9
GA+K CL
Sbjct: 73 GAIKECL 79


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 AVKHCL 9
AV+HCL
Sbjct: 209 AVEHCL 214


>sp|GGGPS_METBU|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GAVKHCL 9
GAVKH L
Sbjct: 188 GAVKHVL 194


>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DCGAVKH 7
D GAV+H
Sbjct: 153 DAGAVRH 159


>sp|RS3_METKA|SMALL ribosomal subunit protein uS3|Methanopyrus kandleri (strain AV19 /

Query: 3 GAVKHC 8
GAVK+C
Sbjct: 157 GAVKYC 162


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 1 DCGAVK 6
+CGAVK
Sbjct: 71 ECGAVK 76


>sp|RS8_HALWD|SMALL ribosomal subunit protein uS8|Haloquadratum walsbyi (strain DSM

Query: 1 DCGAVK 6
+CGAVK
Sbjct: 71 ECGAVK 76


>sp|RS8_HALLT|SMALL ribosomal subunit protein uS8|Halorubrum lacusprofundi (strain

Query: 1 DCGAVK 6
+CGAVK
Sbjct: 71 ECGAVK 76


>sp|Y1355_METJA|UNCHARACTERIZED protein MJ1355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DCGAVKHCLQ 10
D GAV H L+
Sbjct: 306 DLGAVLHTLE 315


>sp|Y2393_ARCFU|UNCHARACTERIZED protein AF_2393|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GAVKHCL 9
G ++HCL
Sbjct: 12 GCLRHCL 18




10|Sequence|46|55|KHCLQTVWNK

>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HCLQTVW 8
HC Q+VW
Sbjct: 255 HCHQSVW 261


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HCLQTVW 8
HC Q++W
Sbjct: 248 HCHQSIW 254


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 HCLQTVW 8
HC Q++W
Sbjct: 248 HCNQSIW 254


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 2 HCLQTVW 8
HC Q+ W
Sbjct: 256 HCGQSTW 262


>sp|Y693_METJA|UNCHARACTERIZED protein MJ0693|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CLQTVWNK 10
CL+ +W+K
Sbjct: 230 CLRILWSK 237


>sp|NIKR_METJA|PUTATIVE nickel-responsive regulator|Methanocaldococcus jannaschii (strain

Query: 2 HCLQTV 7
HCL+T+
Sbjct: 98 HCLETI 103


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 HCLQTVW 8
HC T+W
Sbjct: 72 HCAPTMW 78




11|Sequence|51|60|TVWNKPTVKS

>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 1 TVWNKPTVK 9
T WN+P K
Sbjct: 454 TAWNQPATK 462


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 3 WNKPTV 8
WN PTV
Sbjct: 334 WNDPTV 339


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 TVWNKPTV 8
T WN PT+
Sbjct: 351 TTWNIPTM 358


>sp|NEP1_PYRAE|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum aerophilum

Query: 2 VWNKPTV 8
+WN P V
Sbjct: 17 IWNHPAV 23


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VWNKPTVKS 10
VW PT+++
Sbjct: 879 VWGSPTMRT 887


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 VWNKPTV 8
VWN+P +
Sbjct: 7 VWNEPLI 13


>sp|RL32_METVS|LARGE ribosomal subunit protein eL32|Methanococcus vannielii (strain

Query: 1 TVWNKPT 7
T+W +PT
Sbjct: 34 TMWRRPT 40


>sp|RL32_METVA|LARGE ribosomal subunit protein eL32|Methanococcus vannielii

Query: 1 TVWNKPT 7
T+W +PT
Sbjct: 34 TMWRRPT 40


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 TVWNKPT 7
TVW PT
Sbjct: 52 TVWTGPT 58




12|Sequence|56|65|PTVKSLPCDI

>sp|PYRB_METLZ|ASPARTATE carbamoyltransferase catalytic subunit|Methanocorpusculum labreanum

Query: 1 PTVKSLPC 8
P V SLPC
Sbjct: 273 PAVDSLPC 280


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 PTVKSLPCD 9
P V LPC+
Sbjct: 304 PAVTDLPCE 312


>sp|Y992_METJA|UNCHARACTERIZED protein MJ0992|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTVKSLP 7
PT KSLP
Sbjct: 15 PTFKSLP 21


>sp|CETZ5_HALVD|TUBULIN-LIKE protein CetZ5|Haloferax volcanii (strain ATCC 29605

Query: 5 SLPCDI 10
+LPCD+
Sbjct: 282 TLPCDV 287


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 PTVKSLPCDI 10
PTV +PC +
Sbjct: 57 PTVVEVPCGL 66


>sp|AROD_IGNH4|3-DEHYDROQUINATE dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 KSLPCD 9
K LPCD
Sbjct: 99 KELPCD 104


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 3 VKSLPCDI 10
V SLPC +
Sbjct: 312 VSSLPCHV 319


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VKSLPCDI 10
V SLPC +
Sbjct: 312 VSSLPCHV 319


>sp|MTRH_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina barkeri (strain Fusaro

Query: 1 PTVKSLP 7
PT++S+P
Sbjct: 208 PTIRSIP 214


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 2 TVKSLPCD 9
TVK L CD
Sbjct: 86 TVKMLNCD 93




13|Sequence|61|70|LPCDICKDVV

>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 1 LPCDICKDVV 10
+P D+C+DVV
Sbjct: 99 VPKDLCEDVV 108


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPCDICKDV 9
L C+ CKDV
Sbjct: 811 LDCECCKDV 819


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 3 CDICKDVV 10
C ICKD V
Sbjct: 192 CKICKDYV 199


>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 PCDICKDV 9
P DIC+DV
Sbjct: 264 PRDICEDV 271


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PCDICKD 8
PCD C D
Sbjct: 26 PCDACLD 32


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CDICKD 8
CDICK+
Sbjct: 76 CDICKE 81


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 LPCDICK 7
+PC++C+
Sbjct: 769 VPCEVCR 775


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CDICKDV 9
C+ICK V
Sbjct: 49 CNICKSV 55


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 3 CDICK 7
CD+CK
Sbjct: 1033 CDVCK 1037


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 2 PCDICKDVV 10
PC +C+ V+
Sbjct: 79 PCGVCRGVL 87


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 LPCDICKDV 9
L CD+C ++
Sbjct: 661 LKCDVCGEL 669


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 2 PCDICKDV 9
PC +C DV
Sbjct: 54 PCLVCGDV 61


>sp|KAE1_THESM|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus sibiricus

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|KAE1_THEON|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus onnurineus

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|KAE1_THEKO|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus kodakarensis

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|KAE1_THEGJ|TRNA N6-adenosine threonylcarbamoyltransferase|Thermococcus

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|KAE1_PYRHO|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus horikoshii

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|KAE1_PYRFU|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus furiosus

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|KAE1_PYRAB|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrococcus abyssi (strain

Query: 2 PCDICKD 8
P D+C+D
Sbjct: 279 PYDLCRD 285


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDICKDVV 10
C ICK+++
Sbjct: 113 CRICKNIM 120


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 PCDICKD 8
PC C+D
Sbjct: 518 PCKTCED 524


>sp|Y51B_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514.2|Methanocaldococcus jannaschii

Query: 1 LPCDICKDV 9
+ C ICKDV
Sbjct: 222 VSCGICKDV 230




14|Sequence|66|75|CKDVVTAAGD

>sp|ARGC_ARCFU|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CKDVVTAAGD 10
CK +T AG+
Sbjct: 169 CKSGITGAGE 178




15|Sequence|71|80|TAAGDMLKDN

>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AAGDMLKD 9
AAG+M+KD
Sbjct: 721 AAGEMIKD 728


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 1 TAAGDMLKDN 10
TAA D LKDN
Sbjct: 209 TAATDALKDN 218


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain

Query: 3 AGDMLKDN 10
AGD++K+N
Sbjct: 72 AGDLVKNN 79


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 4 GDMLKDN 10
GD+L+DN
Sbjct: 293 GDILEDN 299


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain C5

Query: 4 GDMLKDN 10
GD+L+DN
Sbjct: 293 GDILEDN 299


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 4 GDMLKDN 10
GD+L+DN
Sbjct: 293 GDILEDN 299


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AAGDMLKD 9
AAG+M+K+
Sbjct: 721 AAGEMIKE 728


>sp|PSB_METRM|PROTEASOME subunit beta|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 AAGDMLKD 9
AAG M+KD
Sbjct: 122 AAGGMIKD 129


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 TAAGDMLKDN 10
T GD KDN
Sbjct: 379 TVTGDFEKDN 388


>sp|HEM3_ARCFU|PROBABLE porphobilinogen deaminase|Archaeoglobus fulgidus (strain ATCC

Query: 3 AGDMLKD 9
AGD++KD
Sbjct: 38 AGDIMKD 44




16|Sequence|76|85|MLKDNATEEE

>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 1 MLKDNATEE 9
+LKDN+ EE
Sbjct: 336 LLKDNSPEE 344


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 3 KDNATEEE 10
KD A+EEE
Sbjct: 78 KDRASEEE 85




17|Sequence|81|90|ATEEEILVYL

>sp|KTHY_AERPE|PUTATIVE thymidylate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ATEEEILVYL 10
A E EILVY+
Sbjct: 118 APEAEILVYI 127


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 2 TEEEILVYL 10
T+EEIL++L
Sbjct: 7 TKEEILLFL 15


>sp|GIN23_SULAC|DNA replication complex GINS protein|Sulfolobus acidocaldarius (strain

Query: 2 TEEEILVY 9
T EEILVY
Sbjct: 155 TTEEILVY 162


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 TEEEILVY 9
TEEEIL Y
Sbjct: 190 TEEEILRY 197


>sp|GIN23_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus (strain

Query: 2 TEEEILVY 9
TEEE+L+Y
Sbjct: 154 TEEELLIY 161




18|Sequence|86|95|ILVYLEKTCD

>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVYLEKTCD 10
L+YLEKT +
Sbjct: 109 LIYLEKTIN 117


>sp|HIS4_NITMS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Nitrosopumilus maritimus (strain

Query: 2 LVYLEKTC 9
L YLEK C
Sbjct: 178 LEYLEKAC 185


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 VYLEKTC 9
+Y+EK C
Sbjct: 509 IYMEKVC 515


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILVYLEKTC 9
+ VY EK+C
Sbjct: 352 VKVYTEKSC 360


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 5 LEKTCD 10
+EKTCD
Sbjct: 340 MEKTCD 345


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LVYLEKTCD 10
LVY K CD
Sbjct: 382 LVYSAKGCD 390


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 1 ILVYLEKTC 9
+L +LEK C
Sbjct: 201 VLPFLEKDC 209


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILVYLEKTC 9
+ YL++TC
Sbjct: 162 VFEYLDRTC 170


>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VYLEKTCD 10
VY+ TCD
Sbjct: 145 VYIVTTCD 152




19|Sequence|91|100|EKTCDWLPKP

>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KTCDWLP 8
+TC W+P
Sbjct: 323 QTCGWIP 329


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TCDWLPK 9
T DW+PK
Sbjct: 631 TDDWIPK 637


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKTCDW 6
EK CDW
Sbjct: 263 EKGCDW 268


>sp|RL15E_METHJ|LARGE ribosomal subunit protein eL15|Methanospirillum hungatei JF-1

Query: 1 EKTCDWLPKP 10
+KT +W+ KP
Sbjct: 145 DKTLNWISKP 154


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKTCDWLPKP 10
E DW+ KP
Sbjct: 411 EIMADWITKP 420


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 EKTCDWL 7
EKTCD L
Sbjct: 341 EKTCDIL 347


>sp|RS4E_METAR|SMALL ribosomal subunit protein eS4|Methanocella arvoryzae (strain DSM

Query: 2 KTCDWLPKP 10
KT W+ KP
Sbjct: 20 KTSKWVAKP 28


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 4 CDWLPK 9
CDWL K
Sbjct: 142 CDWLIK 147


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 4 CDWL 7
CDWL
Sbjct: 142 CDWL 145


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 DWLPKP 10
DW+ KP
Sbjct: 417 DWITKP 422


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain

Query: 3 TCDWLPK 9
T DW+PK
Sbjct: 2 TEDWVPK 8


>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 EKTCDWLPKP 10
E+ +WL KP
Sbjct: 25 EEALEWLKKP 34


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KTCDWLPK 9
K C WL K
Sbjct: 329 KVCSWLIK 336


>sp|RS5_METMA|SMALL ribosomal subunit protein uS5|Methanosarcina mazei (strain ATCC

Query: 5 DWLPK 9
DW+PK
Sbjct: 6 DWVPK 10


>sp|RS5_METAC|SMALL ribosomal subunit protein uS5|Methanosarcina acetivorans (strain

Query: 5 DWLPK 9
DW+PK
Sbjct: 6 DWVPK 10


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 5 DWLPKP 10
DW+P P
Sbjct: 333 DWIPFP 338


>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 KTCDW 6
K CDW
Sbjct: 138 KLCDW 142


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 1 EKTCDWLPKP 10
+ T WLP P
Sbjct: 57 QSTGTWLPVP 66


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EKTCDWLPK 9
E DW PK
Sbjct: 221 ELAADWCPK 229


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 1 EKTCDW 6
EKT DW
Sbjct: 225 EKTSDW 230


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 1 EKTCDW 6
EKT DW
Sbjct: 231 EKTSDW 236




20|Sequence|96|105|WLPKPNMSAS

>sp|SEPS_ARCFU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPKPNMSAS 10
LPKPN+ S
Sbjct: 100 LPKPNVGIS 108


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 LPKPNMSAS 10
LP PN+ AS
Sbjct: 88 LPNPNVEAS 96


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WLPKPNMSAS 10
W P P SAS
Sbjct: 519 WAPAPESSAS 528


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 1 WLPKPNMS 8
W P PN S
Sbjct: 137 WRPTPNAS 144


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WLPKPNMS 8
+LP PN+S
Sbjct: 625 FLPAPNLS 632


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPKPNMSA 9
+PKPN+ A
Sbjct: 281 VPKPNVEA 288


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPKPNM 7
LPKPN+
Sbjct: 489 LPKPNI 494


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC 700893

Query: 1 WLPKPN 6
W+P PN
Sbjct: 193 WVPGPN 198


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 2 LPKPNMSA 9
LPKPN+++
Sbjct: 141 LPKPNINS 148


>sp|COBD_PYRFU|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus furiosus (strain

Query: 1 WLPKPN 6
WL KPN
Sbjct: 241 WLEKPN 246


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 99 LPRPNVGIS 107


>sp|COBD_PYRHO|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus horikoshii (strain

Query: 1 WLPKPNM 7
WL KPN+
Sbjct: 240 WLEKPNI 246


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 WLPKPNMS 8
WL P+MS
Sbjct: 294 WLQMPSMS 301


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 100 LPRPNVGIS 108


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 100 LPRPNVGIS 108


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 LPKPNM 7
LPKPN+
Sbjct: 141 LPKPNI 146


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 100 LPRPNVGIS 108


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 100 LPRPNVGIS 108


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WLPKPN 6
W+P PN
Sbjct: 196 WIPYPN 201


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 100 LPRPNVGIS 108


>sp|FRHB_METBF|COENZYME F420 hydrogenase subunit beta|Methanosarcina barkeri (strain

Query: 1 WLPKPNMSAS 10
W PKP ++ +
Sbjct: 59 WQPKPEVAMT 68


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LPKPNMSAS 10
LP+PN+ S
Sbjct: 100 LPRPNVGIS 108




21|Sequence|101|110|NMSASCKEIV

>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 NMSASCKEI 9
N SCKE+
Sbjct: 275 NYEVSCKEL 283




22|Sequence|106|115|CKEIVDSYLP

>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEIVDSYL 9
KEIVDSYL
Sbjct: 117 KEIVDSYL 124


>sp|RS5_METHJ|SMALL ribosomal subunit protein uS5|Methanospirillum hungatei JF-1

Query: 3 EIVDSYLP 10
EIVD++LP
Sbjct: 40 EIVDAFLP 47


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEIVDSYLP 10
K+I+D YLP
Sbjct: 293 KDILDEYLP 301


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KEIVDSYL 9
KEI+DSY+
Sbjct: 164 KEIIDSYV 171


>sp|FPOA_METMA|F(420)H(2) dehydrogenase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 IVDSYLP 10
I+DSY+P
Sbjct: 9 IIDSYIP 15


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 4 IVDSYLP 10
+VD+YLP
Sbjct: 338 VVDTYLP 344


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 KEIVDSYLP 10
+E+VD +LP
Sbjct: 185 QELVDEFLP 193


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KEIVDSYLP 10
+E+VD +LP
Sbjct: 185 QELVDEFLP 193


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 2 KEIVDSYLP 10
+E+VD +LP
Sbjct: 186 QELVDEFLP 194


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 3 EIVDSYLP 10
EIVD +LP
Sbjct: 40 EIVDMFLP 47


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CKEIVDSY 8
CKE +DSY
Sbjct: 114 CKEELDSY 121


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain

Query: 2 KEIVDSYL 9
KEIVD+Y
Sbjct: 2 KEIVDAYF 9


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KEIVDSYLP 10
KEI +SY+P
Sbjct: 2 KEISESYVP 10


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 KEIVDSY 8
K+IVDSY
Sbjct: 6616 KQIVDSY 6622


>sp|TSAC_METJA|PUTATIVE threonylcarbamoyl-AMP synthase|Methanocaldococcus jannaschii

Query: 1 CKEIVDSYLP 10
K+I+D +LP
Sbjct: 90 AKKIIDKFLP 99


>sp|PORA_METTH|PYRUVATE synthase subunit PorA|Methanothermobacter thermautotrophicus

Query: 2 KEIVDSYLP 10
+E VDS+LP
Sbjct: 183 QEDVDSFLP 191


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 CKEIVDSY 8
CK IVD++
Sbjct: 969 CKNIVDAH 976


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 KEIVDSYL 9
KEI+D+Y+
Sbjct: 164 KEIIDNYV 171


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CKEIVDS 7
C+EI+DS
Sbjct: 332 CEEILDS 338


>sp|AATD_METS5|A-TYPE ATP synthase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 2 KEIVDSYL 9
KE+ DSY+
Sbjct: 60 KEVYDSYM 67


>sp|RL30_CALMQ|LARGE ribosomal subunit protein uL30|Caldivirga maquilingensis (strain

Query: 2 KEIVDSYL 9
+E+VD+YL
Sbjct: 108 EELVDAYL 115


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KEIVDSYL 9
+ +VDSYL
Sbjct: 326 RNVVDSYL 333


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 CKEIVDSYLP 10
C E+V Y+P
Sbjct: 280 CFEVVGFYIP 289


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 CKEIVDSYLP 10
C E+V Y+P
Sbjct: 280 CFEVVGFYIP 289


>sp|ACDB1_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 CKEIVDSYLP 10
C E+V Y+P
Sbjct: 280 CFEVVGFYIP 289


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 CKEIVDSYLP 10
C E+V Y+P
Sbjct: 280 CFEVVGFYIP 289


>sp|ACDB1_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 CKEIVDSYLP 10
C E+V Y+P
Sbjct: 280 CFEVVGFYIP 289


>sp|FKBPL_METJA|LONG-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 2 KEIVDSYLP 10
KEIV Y+P
Sbjct: 157 KEIVKMYVP 165


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 CKEIVDSYLP 10
C E+V Y+P
Sbjct: 281 CFEVVGFYIP 290


>sp|DAPAT_METS3|LL-DIAMINOPIMELATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 KEIVDSYL 9
KEI+D Y+
Sbjct: 316 KEIIDYYM 323


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CKEIVDSY 8
CKE +D Y
Sbjct: 90 CKECMDVY 97


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 CKEIVDSY 8
C++I+DS+
Sbjct: 102 CRQILDSW 109




23|Sequence|111|120|DSYLPVILDI

>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 DSYLPVIL 8
+SY+PVI+
Sbjct: 481 ESYVPVII 488


>sp|PC2DH_METBF|PRECORRIN-2 dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DSYLPVILDI 10
+++LP++LD+
Sbjct: 5 NNFLPLMLDL 14


>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 2 SYLPVILD 9
+YLP ILD
Sbjct: 252 TYLPDILD 259


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DSYLPVILDI 10
SYLP++ D+
Sbjct: 37 SSYLPILKDV 46


>sp|Y886_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0886|Methanocaldococcus

Query: 3 YLPVIL 8
YLPVIL
Sbjct: 342 YLPVIL 347


>sp|MCH_METVS|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SYLPVILDI 10
S LP++LD+
Sbjct: 7 SSLPIVLDM 15




24|Sequence|116|125|VILDIIKGEM

>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ILDIIKGE 9
ILDI+KGE
Sbjct: 272 ILDILKGE 279


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ILDIIKGE 9
ILDI+KGE
Sbjct: 272 ILDILKGE 279


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 2 ILDIIKGE 9
ILDI+KGE
Sbjct: 272 ILDILKGE 279


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ILDIIKGE 9
ILDI+KGE
Sbjct: 272 ILDILKGE 279


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ILDIIKGE 9
ILDI+KGE
Sbjct: 272 ILDILKGE 279


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 ILDIIKGE 9
ILDI+KGE
Sbjct: 272 ILDILKGE 279


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ILDIIKGE 9
+LDI+KGE
Sbjct: 272 VLDILKGE 279


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VILDIIKGE 9
VILD I+GE
Sbjct: 374 VILDRIRGE 382


>sp|PYRH_SACS2|URIDYLATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ILDIIKGE 9
I+DI+KGE
Sbjct: 211 IIDILKGE 218


>sp|BRIX_SULTO|PROBABLE Brix domain-containing ribosomal biogenesis|Sulfurisphaera

Query: 1 VILDIIKGE 9
VI+D+IKG
Sbjct: 60 VIIDVIKGN 68


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VILDIIKGE 9
V+ DI+KGE
Sbjct: 281 VLADILKGE 289


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ILDIIKGEM 10
I+D++K E+
Sbjct: 831 IIDVVKSEL 839


>sp|MDH_THETK|MALATE dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 VILDIIKG 8
V++DIIKG
Sbjct: 28 VLIDIIKG 35


>sp|ADPP_METJA|ADP-RIBOSE pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ILDIIKGEM 10
ILD+I GE+
Sbjct: 124 ILDVIGGEL 132


>sp|Y764_METJA|UNCHARACTERIZED protein MJ0764|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VILDIIKGEM 10
V L IIKGEM
Sbjct: 48 VHLIIIKGEM 57


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 2 ILDIIKGEM 10
I+D+++GE+
Sbjct: 341 IVDVLRGEL 349


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ILDIIKGEM 10
++D+ KGE+
Sbjct: 200 VIDVAKGEV 208




25|Sequence|121|130|IKGEMSRPGE

>sp|NEP1_THEAC|RIBOSOMAL RNA small subunit methyltransferase|Thermoplasma acidophilum

Query: 2 KGEMSRPGE 10
KGEM +P E
Sbjct: 157 KGEMRKPSE 165


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 KGEMSRPGE 10
+GE++ PGE
Sbjct: 4 QGELTLPGE 12


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 IKGEMSRPGE 10
I G M RPG+
Sbjct: 567 IGGRMGRPGK 576


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GEMSRPGE 10
GE+ RPG+
Sbjct: 749 GEIPRPGD 756


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 IKGEMSRPGE 10
I+G +SRP E
Sbjct: 237 IRGYISRPSE 246


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KGEMSRPGE 10
KGE +PGE
Sbjct: 130 KGEKVKPGE 138


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GEMSRPGE 10
GE+ RPG+
Sbjct: 376 GEIPRPGD 383


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 IKGEMSRPGE 10
I G M RPG+
Sbjct: 569 IGGRMGRPGK 578




26|Sequence|126|135|SRPGEVCSAL

>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PGEVC 7
PGEVC
Sbjct: 378 PGEVC 382


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RPGEVC 7
RPGE C
Sbjct: 59 RPGEPC 64


>sp|RPO10_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum neutrophilum (strain DSM

Query: 1 SRPGEVCSAL 10
RPGEV +L
Sbjct: 29 ERPGEVLDSL 38


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 SRPGEVCSAL 10
S PG++C A+
Sbjct: 126 SGPGKLCGAM 135




27|Sequence|131|140|VCSALNLCES

>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 3 SALNLCES 10
SALNLC +
Sbjct: 253 SALNLCAA 260


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 VCSALNLC 8
+C+ LNLC
Sbjct: 157 LCNKLNLC 164


>sp|HEM1_METMJ|GLUTAMYL-TRNA reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 CSALNLC 8
CSA+ LC
Sbjct: 125 CSAIGLC 131


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 ALNLCE 9
ALNLCE
Sbjct: 144 ALNLCE 149


>sp|Y773_METJA|UNCHARACTERIZED protein MJ0773|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCSALNL 7
+CSALN+
Sbjct: 49 LCSALNI 55




28|Sequence|136|145|NLCESLQKHL

>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LCESLQKH 9
LCE LQ H
Sbjct: 206 LCEILQAH 213


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LCESLQKH 9
LCE LQ H
Sbjct: 206 LCEILQAH 213


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LCESLQKHL 10
LCE +KH+
Sbjct: 66 LCEEAKKHV 74


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 2 LCESLQKH 9
LCE +KH
Sbjct: 382 LCEVAEKH 389


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 3 CESLQKHL 10
CE+L+K L
Sbjct: 17 CENLEKEL 24


>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LCESLQKH 9
LC +L KH
Sbjct: 21 LCRNLAKH 28


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 LCESLQKH 9
LC +L KH
Sbjct: 21 LCRNLAKH 28


>sp|RL5_THEKO|LARGE ribosomal subunit protein uL5|Thermococcus kodakarensis (strain

Query: 1 NLCESLQKHL 10
N C +Q+H+
Sbjct: 109 NFCFGIQEHI 118


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 2 LCESLQKHL 10
+ ES++KHL
Sbjct: 189 IIESIKKHL 197


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 2 LCESLQKHL 10
LC ++ KHL
Sbjct: 388 LCYNINKHL 396


>sp|RL5_METKA|LARGE ribosomal subunit protein uL5|Methanopyrus kandleri (strain AV19 /

Query: 1 NLCESLQKHL 10
N+C L++H+
Sbjct: 113 NVCFGLEEHI 122


>sp|PGP_METTP|PHOSPHOGLYCOLATE phosphatase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LCESLQKHL 10
LC+ KHL
Sbjct: 80 LCDEAYKHL 88




29|Sequence|141|150|LQKHLAELNH

>sp|NIFH_METJA|NITROGENASE iron protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQKHLAE 7
LQKHLA+
Sbjct: 137 LQKHLAD 143


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LQKHLAELNH 10
L KH EL H
Sbjct: 166 LSKHYRELGH 175


>sp|RS15_METMJ|SMALL ribosomal subunit protein uS15|Methanoculleus marisnigri (strain

Query: 1 LQKHLAELN 9
++KHLAE N
Sbjct: 98 IRKHLAENN 106


>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 3 KHLAELN 9
KHL ELN
Sbjct: 146 KHLEELN 152


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain DSM

Query: 2 QKHLAELN 9
Q+HL E+N
Sbjct: 334 QRHLIEVN 341


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QKHLAELNH 10
QK L++L+H
Sbjct: 269 QKELSDLDH 277




30|Sequence|146|155|AELNHQKQLE

>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 1 AELNHQKQ 8
AE++HQK+
Sbjct: 439 AEMSHQKE 446


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 1 AELNHQKQ 8
AE++HQK+
Sbjct: 439 AEMSHQKK 446




31|Sequence|151|160|QKQLESNKIP

>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 2 KQLESNKIP 10
KQLE+NKIP
Sbjct: 66 KQLEANKIP 74


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KQLESNKIP 10
KQLES +IP
Sbjct: 2 KQLESFQIP 10


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KQLESNKIP 10
KQLES +IP
Sbjct: 2 KQLESFEIP 10


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KQLESNKIP 10
KQLES +IP
Sbjct: 2 KQLESFEIP 10


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KQLESNKIP 10
KQLES +IP
Sbjct: 2 KQLESFEIP 10


>sp|PURP_NITMS|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QKQLESNKIP 10
++Q++SNK+P
Sbjct: 222 EQQMKSNKVP 231


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 QKQLESNKIP 10
+K++E N IP
Sbjct: 260 KKEVEKNNIP 269


>sp|TRUD_METVS|PROBABLE tRNA pseudouridine synthase D|Methanococcus vannielii (strain ATCC

Query: 1 QKQLESNKIP 10
++QLES KIP
Sbjct: 109 KEQLESVKIP 118


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 QKQLESNKIP 10
+K++E N IP
Sbjct: 260 KKEVEKNNIP 269


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 1 QKQLESNKIP 10
+K++E N IP
Sbjct: 260 KKEVEKNNIP 269


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QKQLESNKIP 10
QK+LE K+P
Sbjct: 1739 QKELEDRKLP 1748


>sp|Y1339_METJA|UNCHARACTERIZED protein MJ1339|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KQLESNKIP 10
K LES KIP
Sbjct: 97 KLLESKKIP 105


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila

Query: 1 QKQLESNKIP 10
QK E N+IP
Sbjct: 54 QKDDEGNRIP 63


>sp|T1SX_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 QKQLESNKIP 10
+K LES KIP
Sbjct: 365 KKDLESIKIP 374




32|Sequence|156|165|SNKIPELDMT

>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 NKIPELDMT 10
N +PELD++
Sbjct: 34 NALPELDLS 42


>sp|CYAS_METPS|CYSTEATE synthase|Methanocella paludicola (strain DSM 17711

Query: 4 IPELDM 9
IPELDM
Sbjct: 285 IPELDM 290


>sp|KORC_METJA|2-OXOGLUTARATE synthase subunit KorC|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SNKIPELDMT 10
++K+PE+D+T
Sbjct: 108 TDKMPEVDVT 117


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain

Query: 1 SNKIPELDM 9
+N+IP+LD+
Sbjct: 33 ANEIPKLDV 41


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 IPELDM 9
IPELDM
Sbjct: 284 IPELDM 289


>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain DSM

Query: 3 KIPELDM 9
+IPELD+
Sbjct: 121 RIPELDL 127


>sp|UPP_SULTO|URACIL phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NKIPELDM 9
NKIPE+++
Sbjct: 125 NKIPEINI 132


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SNKIPEL 7
SN+IPEL
Sbjct: 392 SNEIPEL 398


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SNKIPEL 7
SN+IPEL
Sbjct: 393 SNEIPEL 399




33|Sequence|161|170|ELDMTEVVAP

>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 1 ELDMTEVVAP 10
ELDM ++AP
Sbjct: 69 ELDMISLIAP 78


>sp|NAC_HALSA|NASCENT polypeptide-associated complex protein|Halobacterium salinarum

Query: 1 ELDMTEVV 8
ELD TEVV
Sbjct: 25 ELDATEVV 32




34|Sequence|166|175|EVVAPFMANI

>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 VVAPFMA 8
++APFMA
Sbjct: 118 IIAPFMA 124


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EVVAPFMANI 10
E V P++ANI
Sbjct: 94 ERVGPYLANI 103


>sp|RL10_PYRHO|LARGE ribosomal subunit protein uL10|Pyrococcus horikoshii (strain ATCC

Query: 1 EVVAPFMANI 10
EV+ P +ANI
Sbjct: 167 EVITPELANI 176


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 1 EVVAPFMANI 10
EV+ P +ANI
Sbjct: 167 EVITPELANI 176


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EVVAPFMANI 10
++ AP++AN+
Sbjct: 83 DIGAPYLANL 92




35|Sequence|171|180|FMANIPLLLY

>sp|Y1571_METJA|UNCHARACTERIZED protein MJ1571|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FMANIPLLLY 10
+++NIPLL Y
Sbjct: 88 YLSNIPLLQY 97


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 ANIPLLLY 10
A+IPL++Y
Sbjct: 127 ADIPLIIY 134


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 MANIPLLL 9
MAN P+LL
Sbjct: 1 MANAPVLL 8


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 2 MANIPLLL 9
+A+IPLLL
Sbjct: 51 LAHIPLLL 58


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ANIPLLLY 10
A+IP++LY
Sbjct: 124 ADIPIILY 131


>sp|GPT_SULAC|PUTATIVE UDP-N-acetylglucosamine--dolichyl-phosphate

Query: 3 ANIPLLLY 10
A+IPL+LY
Sbjct: 116 ASIPLILY 123


>sp|DAPA_META3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 NIPLLLY 10
NIP++LY
Sbjct: 125 NIPIVLY 131


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 MANIPLLLY 10
+AN+P++L+
Sbjct: 63 VANVPVVLF 71




36|Sequence|176|185|PLLLYPQDGP

>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 PLLLYPQD 8
PLL++P+D
Sbjct: 151 PLLIFPKD 158


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PLLLYPQDG 9
PLL YP D
Sbjct: 398 PLLYYPLDA 406


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLLLYPQDG 9
PLL YP D
Sbjct: 398 PLLYYPLDA 406


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLLYPQDGP 10
LL PQD P
Sbjct: 251 LLFQPQDHP 259


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 LLLYPQDGP 10
LL PQD P
Sbjct: 265 LLFMPQDHP 273


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 PLLLYPQD 8
P+L+ PQD
Sbjct: 307 PILVMPQD 314


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PLLLYPQD 8
P+L+ PQD
Sbjct: 308 PILVMPQD 315


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 PLLLYPQD 8
P+L+ PQD
Sbjct: 307 PILVMPQD 314


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LLYPQDG 9
++YP+DG
Sbjct: 210 IVYPEDG 216


>sp|RL2_KORCO|LARGE ribosomal subunit protein uL2|Korarchaeum cryptofilum (strain

Query: 5 YPQDG 9
YPQDG
Sbjct: 30 YPQDG 34




37|Sequence|181|190|PQDGPRSKPQ

>sp|NUSA_THECE|PROBABLE transcription termination protein NusA|Thermococcus celer

Query: 4 GPRSKPQ 10
GPR KP+
Sbjct: 111 GPREKPR 117


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 3 DGPRSKPQ 10
DGP KP+
Sbjct: 193 DGPNGKPR 200


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DGPRSKPQ 10
DGPRS+ +
Sbjct: 230 DGPRSRDE 237




38|Sequence|186|195|RSKPQPKDNG

>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RSKPQPKDN 9
+S PQP DN
Sbjct: 78 KSIPQPSDN 86




39|Sequence|191|200|PKDNGDVCQD

>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PKDNGDVCQD 10
P+D D C+D
Sbjct: 278 PRDIDDACRD 287


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GDVCQD 10
GDVC+D
Sbjct: 30 GDVCRD 35


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 5 GDVCQD 10
GDVC+D
Sbjct: 30 GDVCRD 35


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 5 GDVCQD 10
GDVC+D
Sbjct: 30 GDVCRD 35


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KDNGDVCQ 9
+ NGD+C+
Sbjct: 52 EKNGDICE 59


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DNGDVC 8
D+GDVC
Sbjct: 365 DDGDVC 370


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 KDNGDVCQD 10
+D G +C+D
Sbjct: 20 EDTGRICRD 28




40|Sequence|196|205|DVCQDCIQMV

>sp|ARLY_METM7|ARGININOSUCCINATE lyase|Methanococcus maripaludis (strain C7 /

Query: 5 DCIQMV 10
DCIQMV
Sbjct: 337 DCIQMV 342


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 2 VCQDCIQM 9
+C DCI M
Sbjct: 282 LCTDCINM 289


>sp|SYM_HALSA|METHIONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VCQDCIQMV 10
V +DC+Q+V
Sbjct: 477 VMRDCVQLV 485


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 1 DVCQDCIQMV 10
D+C C +MV
Sbjct: 198 DLCGGCTEMV 207


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VCQDC 6
+CQDC
Sbjct: 48 ICQDC 52


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VCQDCIQMV 10
+C+DC++ +
Sbjct: 95 LCEDCLERI 103


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VCQDCIQMV 10
+C DC+ M+
Sbjct: 23 ICVDCLTML 31


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 2 VCQDCIQ 8
VC+ C+Q
Sbjct: 577 VCKKCVQ 583


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 VCQDCIQMV 10
V ++C+QMV
Sbjct: 471 VLRNCLQMV 479


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 1 DVCQDCI 7
D C+DC+
Sbjct: 235 DNCEDCL 241


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 DVCQDC 6
D+CQ C
Sbjct: 452 DICQAC 457


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 2 VCQDCI 7
+C+DCI
Sbjct: 140 LCKDCI 145


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VCQDCIQM 9
V +DCIQ+
Sbjct: 518 VMRDCIQL 525


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 VCQDC 6
VC+DC
Sbjct: 460 VCEDC 464


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VCQDCI 7
VC DC+
Sbjct: 282 VCTDCV 287


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 2 VCQDC 6
VC+DC
Sbjct: 56 VCEDC 60


>sp|RPO11_METVS|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus vannielii (strain ATCC

Query: 1 DVCQDCIQ 8
D+C +C++
Sbjct: 86 DLCSNCLE 93


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 DVCQDCIQ 8
D+C +CI+
Sbjct: 569 DLCLECIR 576


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 VCQDCIQ 8
+C DC++
Sbjct: 116 ICDDCLK 122


>sp|TPIS_METKA|TRIOSEPHOSPHATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 DVCQDCI 7
DVC+ CI
Sbjct: 108 DVCRACI 114


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVCQDCIQM 9
D C DC M
Sbjct: 322 DACMDCNAM 330


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DVCQDCIQM 9
D C DC M
Sbjct: 322 DACMDCNAM 330


>sp|KTHY_METS3|PROBABLE thymidylate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VCQDCIQ 8
+C DCI+
Sbjct: 186 ICPDCIR 192


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VCQDCIQMV 10
+C +CI+ +
Sbjct: 429 ICMECIEQL 437


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC

Query: 2 VCQDC 6
VC+DC
Sbjct: 41 VCEDC 45




41|Sequence|201|210|CIQMVTDIQT

>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IQMVTDIQT 10
+ MVTDI+T
Sbjct: 115 LPMVTDIET 123


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CIQMVTDI 8
C+ M+T+I
Sbjct: 174 CLDMITEI 181




42|Sequence|206|215|TDIQTAVRTN

>sp|XACI_HALVD|XYLOSE/ARABINOSE import permease protein XacI|Haloferax volcanii (strain ATCC

Query: 1 TDIQTAVRTN 10
T I TA++TN
Sbjct: 43 TGIMTAIKTN 52




43|Sequence|211|220|AVRTNSTFVQ

>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AVRTNSTFVQ 10
A RTN+TF++
Sbjct: 214 AHRTNATFIR 223


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AVRTNSTFVQ 10
A RTN+TF++
Sbjct: 214 AHRTNATFIR 223


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AVRTNSTFVQ 10
A +N+TF+Q
Sbjct: 189 ATESNATFIQ 198


>sp|PAN_METJA|PROTEASOME-ACTIVATING nucleotidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVRTNSTFVQ 10
A TN+TF++
Sbjct: 225 ATETNATFIR 234




44|Sequence|216|225|STFVQALVEH

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 3 FVQALVE 9
FVQALVE
Sbjct: 527 FVQALVE 533


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 STFVQALVEH 10
+TF QAL E+
Sbjct: 262 TTFAQALAEY 271


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 1 STFVQALVE 9
+TF QAL E
Sbjct: 264 TTFAQALAE 272


>sp|DHAS_ARCFU|ASPARTATE-SEMIALDEHYDE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FVQALVEH 10
F+Q L EH
Sbjct: 18 FIQMLAEH 25


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TFVQALVEH 10
TFV ++EH
Sbjct: 295 TFVDRVIEH 303




45|Sequence|221|230|ALVEHVKEEC

>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LVEHVKEE 9
++EH+KEE
Sbjct: 782 VIEHLKEE 789


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVEHVKEEC 10
L+E +KEEC
Sbjct: 1144 LIEVIKEEC 1152


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LVEHVKEEC 10
+ HV EEC
Sbjct: 711 IAPHVAEEC 719


>sp|MCH_METKA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 LVEHVKEEC 10
+ EHV +EC
Sbjct: 149 VAEHVADEC 157


>sp|SYR_METST|ARGININE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VEHVKEE 9
VEH KEE
Sbjct: 386 VEHAKEE 392




46|Sequence|226|235|VKEECDRLGP

>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VKEECDRLG 9
V ECDRLG
Sbjct: 317 VDRECDRLG 325


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VKEECDRLG 9
V ECDRLG
Sbjct: 317 VDRECDRLG 325


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VKEECDRLG 9
V +ECDRLG
Sbjct: 314 VADECDRLG 322


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 2 KEECDRLGP 10
K+ECD++ P
Sbjct: 490 KKECDKINP 498


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KEECDRLGP 10
K+ECD++ P
Sbjct: 490 KKECDKINP 498


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 2 KEECDRLGP 10
K+ECD++ P
Sbjct: 490 KKECDKINP 498


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 1 VKEECDRLG 9
+K+ CD+LG
Sbjct: 144 LKQLCDKLG 152


>sp|ADPRH_METOA|PROTEIN-ADP-RIBOSE hydrolase|Methanobrevibacter oralis

Query: 1 VKEECDRL 8
++EEC+R+
Sbjct: 127 LREECNRM 134


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VKEECDRLG 9
V+ EC RLG
Sbjct: 314 VESECQRLG 322


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 KEECDRLGP 10
K+EC+++ P
Sbjct: 490 KKECEKINP 498


>sp|ENGB_HALMA|PROBABLE GTP-binding protein EngB|Haloarcula marismortui (strain ATCC 43049

Query: 1 VKEECDRLG 9
+ E CDRLG
Sbjct: 152 LNELCDRLG 160


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKEECD 6
VKE+CD
Sbjct: 444 VKEQCD 449


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 EECDRL 8
+ECDRL
Sbjct: 342 KECDRL 347


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 3 EECDRLG 9
EE DRLG
Sbjct: 240 EEADRLG 246


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 EECDRL 8
+ECDRL
Sbjct: 338 KECDRL 343


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EECDRLG 9
EE DRLG
Sbjct: 240 EEADRLG 246


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 EECDRLG 9
EE DRLG
Sbjct: 240 EEADRLG 246


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 3 EECDRLG 9
+ECDRL
Sbjct: 338 KECDRLA 344


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 EECDRLG 9
EE DRLG
Sbjct: 240 EEADRLG 246


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEECDRL 8
KE CDR+
Sbjct: 252 KEVCDRM 258


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 EECDRLG 9
+ECDRL
Sbjct: 338 KECDRLA 344


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 EECDRLG 9
+ECDRL
Sbjct: 338 KECDRLA 344


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 ECDRLGP 10
ECDRL P
Sbjct: 747 ECDRLVP 753


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 EECDRLG 9
+ECDRL
Sbjct: 338 KECDRLA 344


>sp|Y356_ARCFU|UNCHARACTERIZED sugar kinase AF_0356|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EECDRLG 9
EEC RLG
Sbjct: 222 EECGRLG 228


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 EECDRL 8
+ECDRL
Sbjct: 338 KECDRL 343


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 1 VKEECDRL 8
+K+EC RL
Sbjct: 143 IKKECGRL 150


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 1 VKEECDRLG 9
V+EE DR G
Sbjct: 34 VREEADRRG 42


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 EECDRLG 9
+EC RLG
Sbjct: 367 QECTRLG 373


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 EECDRLG 9
+EC RLG
Sbjct: 367 QECTRLG 373


>sp|SYR_METJA|ARGININE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEECDRLG 9
KEEC++ G
Sbjct: 396 KEECNKRG 403


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VKEECDRLG 9
K+ CDR+G
Sbjct: 267 TKQYCDRVG 275


>sp|ENGB_HALLT|PROBABLE GTP-binding protein EngB|Halorubrum lacusprofundi (strain ATCC

Query: 1 VKEECDRLG 9
+ E CDRLG
Sbjct: 152 LDEICDRLG 160


>sp|HOSA_SULAC|HOMOCITRATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VKEECDRLG 9
VK+ DRLG
Sbjct: 335 VKDRFDRLG 343


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EECDRLG 9
EEC RLG
Sbjct: 254 EECVRLG 260


>sp|NIFB_METJA|FEMO cofactor biosynthesis protein NifB|Methanocaldococcus jannaschii

Query: 1 VKEECDRLGP 10
V+EEC++ P
Sbjct: 248 VREECEKYIP 257


>sp|ENGB_HALWD|PROBABLE GTP-binding protein EngB|Haloquadratum walsbyi (strain DSM 16790

Query: 5 CDRLG 9
CDRLG
Sbjct: 156 CDRLG 160


>sp|Y760_METJA|UNCHARACTERIZED protein MJ0760|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKEECDRL 8
+K ECDR+
Sbjct: 203 LKGECDRV 210


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 VKEECDRLG 9
+ EEC +LG
Sbjct: 27 IAEECRKLG 35




47|Sequence|231|240|DRLGPGMADI

>sp|DNAG_THEON|DNA primase DnaG|Thermococcus onnurineus (strain NA1)

Query: 1 DRLGPGMADI 10
DR+GP A I
Sbjct: 122 DRVGPAEAKI 131


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RLGPGMADI 10
R+GPG D+
Sbjct: 311 RVGPGTEDV 319


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DRLGPGMADI 10
DR+GP A I
Sbjct: 121 DRVGPAEAHI 130


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DRLGPGMADI 10
+RL P MAD+
Sbjct: 342 ERLRPKMADV 351


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RLGPGMADI 10
RLGPG ++
Sbjct: 450 RLGPGRVEV 458


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 DRLGPGMAD 9
D L PG+AD
Sbjct: 483 DELKPGIAD 491


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 DRLGPGMAD 9
D L PG+AD
Sbjct: 483 DELKPGIAD 491


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RLGPGMADI 10
RLGPG ++
Sbjct: 450 RLGPGRVEV 458


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 DRLGPGMA 8
D +GPG+A
Sbjct: 313 DMMGPGVA 320


>sp|RFCL_SULTO|REPLICATION factor C large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DRLGPGMA 8
D +GPG+A
Sbjct: 311 DLMGPGIA 318


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DRLGPGMA 8
D +GPG+A
Sbjct: 311 DLMGPGIA 318


>sp|LYSZ_SULTO|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RLGPGM 7
R+GPGM
Sbjct: 215 RIGPGM 220


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RLGPGMADI 10
RLGPG ++
Sbjct: 450 RLGPGRVEL 458


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 DRLGPGMADI 10
++LGPG +I
Sbjct: 207 EKLGPGNVEI 216


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRLGPGMA 8
D +GPG+A
Sbjct: 320 DLMGPGVA 327


>sp|DNAG_HALSA|DNA primase DnaG|Halobacterium salinarum (strain ATCC 700922

Query: 1 DRLGPGMADI 10
+R+GP AD+
Sbjct: 91 ERIGPCRADV 100


>sp|DNAG_HALS3|DNA primase DnaG|Halobacterium salinarum (strain ATCC 29341

Query: 1 DRLGPGMADI 10
+R+GP AD+
Sbjct: 91 ERIGPCRADV 100


>sp|GUAAA_HALSA|GMP synthase [glutamine-hydrolyzing] subunit A|Halobacterium

Query: 4 GPGMADI 10
GP MADI
Sbjct: 51 GPTMADI 57


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LGPGMADI 10
LGPG+A++
Sbjct: 108 LGPGVAEM 115


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain

Query: 2 RLGPGMADI 10
R+G G AD+
Sbjct: 34 RIGAGFADL 42




48|Sequence|236|245|GMADICKNYI

>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MADICKNYI 10
+ADICK YI
Sbjct: 112 LADICKYYI 120


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 MADICKNYI 10
++DIC +YI
Sbjct: 270 LSDICLSYI 278


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GMADICKN 8
G+A +CKN
Sbjct: 621 GLARMCKN 628


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GMADICKNYI 10
G+ +C NY+
Sbjct: 141 GLTLVCNNYV 150


>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 MADICKNY 9
+A IC+NY
Sbjct: 233 IAKICENY 240


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GMADICK 7
G+AD+C+
Sbjct: 173 GVADVCR 179


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GMADICKNY 9
G+A I KNY
Sbjct: 35 GLARISKNY 43


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 169 GCADIISNY 177


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 165 GCADIISNY 173


>sp|G1PDH_METPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaerula palustris (strain ATCC

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 178 GCADIISNY 186


>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 165 GCADIISNY 173


>sp|G1PDH_HALSA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 700922

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 169 GCADIISNY 177


>sp|G1PDH_HALS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halobacterium salinarum (strain ATCC 29341

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 169 GCADIISNY 177


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 169 GCADIISNY 177


>sp|G1PDH_HALLT|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 165 GCADIISNY 173


>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 4 DICKNY 9
D C+NY
Sbjct: 21 DFCRNY 26


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 2 MADICKNY 9
+ D+CK Y
Sbjct: 145 LLDVCKEY 152


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 1 GMADICKNY 9
G ADI NY
Sbjct: 179 GCADIIANY 187


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 MADICKNY 9
+AD+C+ Y
Sbjct: 404 VADLCEQY 411


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 MADICKNY 9
+AD+C+ Y
Sbjct: 404 VADLCEQY 411


>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 5 ICKNYI 10
IC+NYI
Sbjct: 224 ICRNYI 229


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 5 ICKNYI 10
IC+NYI
Sbjct: 224 ICRNYI 229


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GMADICKNY 9
G AD+ NY
Sbjct: 178 GCADVISNY 186


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 GMADICKNY 9
G AD+ NY
Sbjct: 178 GCADVISNY 186




49|Sequence|241|250|CKNYISQYSE

>sp|HJE_SULAC|CROSSOVER junction endodeoxyribonuclease Hje|Sulfolobus acidocaldarius

Query: 2 KNYISQYSE 10
+NYISQ+ E
Sbjct: 118 ENYISQFLE 126


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 NYISQYSE 10
NY+SQY++
Sbjct: 766 NYLSQYAD 773


>sp|Y979_METVS|UPF0179 protein Mevan_0979|Methanococcus vannielii (strain ATCC 35089

Query: 1 CKNYISQYSE 10
CKNY+S + E
Sbjct: 102 CKNYLSCHPE 111


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CKNYISQ 7
C NYISQ
Sbjct: 170 CVNYISQ 176


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KNYISQYSE 10
K Y+S+YS+
Sbjct: 530 KGYLSRYSK 538


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NYISQYSE 10
+YI++YSE
Sbjct: 864 SYINEYSE 871


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 NYISQY 8
NYISQY
Sbjct: 576 NYISQY 581


>sp|FRHB_METTH|COENZYME F420 hydrogenase subunit beta|Methanothermobacter

Query: 1 CKNYISQYSE 10
CK+Y+++ ++
Sbjct: 195 CKDYVAELAD 204


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KNYISQYSE 10
K YIS+Y++
Sbjct: 530 KGYISRYAK 538


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 2 KNYISQYS 9
K Y+S+YS
Sbjct: 530 KGYLSRYS 537


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 KNYISQYS 9
K Y+S+YS
Sbjct: 530 KGYLSRYS 537


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 2 KNYISQYS 9
K Y+S+YS
Sbjct: 530 KGYLSRYS 537


>sp|PHEA_METJA|PREPHENATE dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CKNYISQYS 9
C+NYI ++
Sbjct: 111 CRNYIKKHG 119


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 CKNYISQYSE 10
C+NY+S + E
Sbjct: 102 CENYLSCHPE 111




50|Sequence|246|255|SQYSEIAIQM

>sp|URED_CENSY|UREASE accessory protein UreD|Cenarchaeum symbiosum (strain A)

Query: 2 QYSEIAIQM 10
QYSE+ +Q+
Sbjct: 31 QYSEVPLQV 39




51|Sequence|251|260|IAIQMMMHMQ

***** No hits found ******


52|Sequence|256|265|MMHMQPKEIC

>sp|ACYP_METHJ|ACYLPHOSPHATASE hungatei JF-1 (strain ATCC

Query: 2 MHMQPKEIC 10
+H+Q KE+C
Sbjct: 73 VHVQEKEVC 81


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 HMQPKEIC 10
HM P E C
Sbjct: 277 HMPPPEYC 284


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 6 PKEIC 10
PKEIC
Sbjct: 172 PKEIC 176


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 6 PKEIC 10
PKEIC
Sbjct: 172 PKEIC 176


>sp|Y699_METJA|UNCHARACTERIZED protein MJ0699|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MMHMQPKEI 9
+ H++PK+I
Sbjct: 306 LYHIEPKDI 314




53|Sequence|261|270|PKEICALVGF

>sp|DEOC_METAR|DEOXYRIBOSE-PHOSPHATE aldolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PKEICALVGF 10
P ++C++VGF
Sbjct: 59 PVKVCSVVGF 68


>sp|Y695_THEPD|UPF0201 protein Tpen_0695|Thermofilum pendens (strain DSM 2475

Query: 1 PKEICALVG 9
PKE CA+VG
Sbjct: 29 PKESCAVVG 37


>sp|GATA_CENSY|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 PKEICALVGF 10
P C +VGF
Sbjct: 177 PASFCGMVGF 186


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PKEICALVG 9
P+ CA+VG
Sbjct: 215 PERTCAMVG 223


>sp|TAL_METM7|PROBABLE transaldolase|Methanococcus maripaludis (strain C7 /

Query: 2 KEICALV 8
KEICA+V
Sbjct: 44 KEICAIV 50


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PKEICALVGF 10
PK I +VGF
Sbjct: 55 PKTIATVVGF 64


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 1 PKEICA 6
PKEIC+
Sbjct: 172 PKEICS 177


>sp|Y830_METJA|UNCHARACTERIZED protein MJ0830|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKEICALVGF 10
PKE C L F
Sbjct: 165 PKETCLLTRF 174


>sp|NADM_METLZ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PKEICALVG 9
PKE+ ++VG
Sbjct: 145 PKEVVSVVG 153


>sp|RL37_METTH|LARGE ribosomal subunit protein eL37|Methanothermobacter

Query: 2 KEICALVGF 10
K++CA GF
Sbjct: 30 KKVCAACGF 38


>sp|IDI2_METBF|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KEICALVG 9
KEIC+++G
Sbjct: 179 KEICSVLG 186


>sp|Y199_HALMA|PUTATIVE transcriptional regulatory protein rrnAC0199|Haloarcula

Query: 1 PKEICALVGF 10
P E+ A VGF
Sbjct: 7 PDELLAAVGF 16


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ICALVGF 10
ICALVG
Sbjct: 357 ICALVGL 363


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 PKEIC 5
PKEIC
Sbjct: 196 PKEIC 200


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 KEICALVG 9
K IC LVG
Sbjct: 1019 KRICELVG 1026


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PKEICA 6
PKE CA
Sbjct: 38 PKEFCA 43


>sp|RL37_METMP|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 KEICALVGF 10
K++CA GF
Sbjct: 32 KKVCAACGF 40


>sp|RL37_METM7|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 KEICALVGF 10
K++CA GF
Sbjct: 32 KKVCAACGF 40


>sp|RL37_METM5|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 KEICALVGF 10
K++CA GF
Sbjct: 32 KKVCAACGF 40


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KEICALVGF 10
+E C LVG+
Sbjct: 288 EEFCRLVGY 296


>sp|RL18_THEVO|LARGE ribosomal subunit protein uL18|Thermoplasma volcanium (strain

Query: 3 EICALVGF 10
+IC LVG+
Sbjct: 72 QICYLVGY 79


>sp|RL37_METM6|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 KEICALVGF 10
K++CA GF
Sbjct: 32 KKVCAACGF 40


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 PKEICALVGF 10
P C +VGF
Sbjct: 158 PASHCGIVGF 167


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PKEICALVGF 10
PK+ CA++ F
Sbjct: 97 PKKACAIIEF 106


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 PKEICALVGF 10
P C +VGF
Sbjct: 158 PASHCGIVGF 167


>sp|DEOC_METTH|DEOXYRIBOSE-PHOSPHATE aldolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 ICALVGF 10
+C++VGF
Sbjct: 66 VCSVVGF 72


>sp|TAL_META3|PROBABLE transaldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 KEICALV 8
KEIC++V
Sbjct: 44 KEICSIV 50


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 1 PKEICALVG 9
PK +C + G
Sbjct: 6 PKRVCPICG 14


>sp|TAL_METM6|PROBABLE transaldolase|Methanococcus maripaludis (strain C6 /

Query: 2 KEICALV 8
KEIC++V
Sbjct: 44 KEICSIV 50


>sp|TAL_METM5|PROBABLE transaldolase|Methanococcus maripaludis (strain C5 /

Query: 2 KEICALV 8
KEIC++V
Sbjct: 44 KEICSIV 50


>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PKEICA 6
PKEIC+
Sbjct: 172 PKEICS 177


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 PKEICALVGF 10
P C +VGF
Sbjct: 158 PASHCGIVGF 167


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 PKEICALVGF 10
P C +VGF
Sbjct: 158 PASHCGIVGF 167


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 2 KEICALVG 9
K++C L+G
Sbjct: 155 KDVCVLIG 162


>sp|TAL_METMP|PROBABLE transaldolase|Methanococcus maripaludis (strain DSM 14266

Query: 2 KEICALV 8
KEIC++V
Sbjct: 44 KEICSIV 50


>sp|DN7_METCR|DNA-BINDING protein 7|Metallosphaera cuprina (strain Ar-4)

Query: 1 PKEICALVG 9
PKE+ +++G
Sbjct: 52 PKELLSMIG 60


>sp|RL37_NATPD|LARGE ribosomal subunit protein eL37|Natronomonas pharaonis (strain

Query: 2 KEICALVGF 10
K++CA GF
Sbjct: 32 KKVCASCGF 40


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PKEICALVGF 10
PK+ CA++ F
Sbjct: 97 PKKACAVIEF 106


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PKEICALVGF 10
PK+ CA++ F
Sbjct: 95 PKKSCAIIEF 104


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium

Query: 4 ICALVGF 10
ICAL+G
Sbjct: 10 ICALIGL 16


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 4 ICALVGF 10
ICAL+G
Sbjct: 10 ICALIGL 16


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KEICALVG 9
K+ CAL+G
Sbjct: 318 KDACALLG 325




54|Sequence|266|275|ALVGFCDEVK

>sp|IXTPA_METJA|DITP/XTP pyrophosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVGFCDE 8
++G+CDE
Sbjct: 110 VIGYCDE 116


>sp|RS10_METBU|SMALL ribosomal subunit protein uS10|Methanococcoides burtonii (strain

Query: 2 LVGFCDEVK 10
L G CD+VK
Sbjct: 17 LDGVCDQVK 25


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 4 GFCDEV 9
FCDEV
Sbjct: 293 AFCDEV 298


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LVGFCDE 8
LVGF DE
Sbjct: 232 LVGFTDE 238


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVGFCDEVK 10
++G CDE+K
Sbjct: 172 IIGECDELK 180


>sp|RS10_METMP|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 2 LVGFCDEVK 10
L G CD++K
Sbjct: 16 LDGVCDQIK 24


>sp|RS10_METM7|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 2 LVGFCDEVK 10
L G CD++K
Sbjct: 16 LDGVCDQIK 24


>sp|RS10_METM6|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 2 LVGFCDEVK 10
L G CD++K
Sbjct: 16 LDGVCDQIK 24


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LVGFCDEV 9
L+GF DE+
Sbjct: 231 LLGFTDEI 238


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVGFCD 7
LVG+CD
Sbjct: 123 LVGWCD 128


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 3 VGFCDEVK 10
G CDE++
Sbjct: 60 TGLCDEIR 67


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 5 FCDEVK 10
FCDE K
Sbjct: 184 FCDETK 189


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 4 GFCDEVK 10
GF DE+K
Sbjct: 187 GFSDEIK 193




55|Sequence|271|280|CDEVKEMPMQ

>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEVKEMPMQ 10
DE+K MP++
Sbjct: 242 DEIKTMPLE 250


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 2 DEVKEMP 8
DEVKE+P
Sbjct: 129 DEVKELP 135


>sp|GUAAA_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus abyssi

Query: 2 DEVKEMP 8
DEVKE+P
Sbjct: 129 DEVKELP 135


>sp|GUAAA_NATPD|GMP synthase [glutamine-hydrolyzing] subunit A|Natronomonas pharaonis

Query: 2 DEVKEMP 8
DEVKE+P
Sbjct: 125 DEVKELP 131


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 CDEVKEM 7
C+E+KEM
Sbjct: 191 CEEIKEM 197


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 2 DEVKEMP 8
DEVKE+P
Sbjct: 127 DEVKEIP 133


>sp|GUAAA_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus horikoshii

Query: 2 DEVKEMP 8
DEVKE+P
Sbjct: 130 DEVKELP 136


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DEVKEMPMQ 10
DEVK +P Q
Sbjct: 253 DEVKLLPKQ 261


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DEVKEMPM 9
+E+KE+PM
Sbjct: 157 EEIKEIPM 164


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DEVKEMPMQ 10
DE+ EMP +
Sbjct: 265 DEIYEMPFE 273


>sp|GUAAA_HALMA|GMP synthase [glutamine-hydrolyzing] subunit A|Haloarcula marismortui

Query: 1 CDEVKEMP 8
DEVKE+P
Sbjct: 124 ADEVKEVP 131


>sp|GUAAA_METKA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanopyrus kandleri

Query: 2 DEVKEMP 8
DEVKE+P
Sbjct: 128 DEVKEVP 134


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DEVKEM 7
DEVKEM
Sbjct: 289 DEVKEM 294


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 1 CDEVKEMPM 9
C E+ E+PM
Sbjct: 223 CPELLEVPM 231




56|Sequence|276|285|EMPMQTLVPA

>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PMQTLVPA 10
P+Q LVPA
Sbjct: 295 PLQDLVPA 302


>sp|RTCA_SACS2|RNA 3'-terminal phosphate cyclase|Saccharolobus solfataricus (strain

Query: 4 MQTLVPA 10
MQT++PA
Sbjct: 100 MQTMIPA 106


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EMPMQTLVPA 10
E+P+ LVPA
Sbjct: 283 ELPVDILVPA 292




57|Sequence|281|290|TLVPAKVASK

>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TLVPAKVASK 10
TLVP K +K
Sbjct: 520 TLVPLKAGTK 529


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TLVPAKVASK 10
T+VP K SK
Sbjct: 138 TIVPEKAVSK 147




58|Sequence|286|295|KVASKNVIPA

>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis

Query: 1 KVASKNVIPA 10
K+A+KN++P
Sbjct: 22 KIATKNLVPG 31


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 1 KVASKNVIPA 10
K+A+KN++P
Sbjct: 22 KIATKNLVPG 31


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 1 KVASKNVIPA 10
K+A+KN++P
Sbjct: 22 KIATKNLVPG 31


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 1 KVASKNVIPA 10
K+A+KN++P
Sbjct: 23 KIATKNLVPG 32


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 KVASKNVIPA 10
K+A+KN++P
Sbjct: 23 KIATKNLVPG 32


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 1 KVASKNVIPA 10
++A+KN++P
Sbjct: 27 RIATKNLVPG 36


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 1 KVASKNVIPA 10
K+A+KN++P
Sbjct: 27 KLATKNLVPG 36


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 2 VASKNVIPA 10
VAS +VIPA
Sbjct: 820 VASVDVIPA 828


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 1 KVASKNVIPA 10
++A+KN++P
Sbjct: 22 RIATKNLVPG 31


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VASKNVIP 9
+A KNV+P
Sbjct: 147 LAEKNVVP 154


>sp|DGGGP_METJA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VASKNVIPA 10
VA KNV+P
Sbjct: 153 VAGKNVMPV 161


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 KVASKNVIPA 10
++A+KN++P
Sbjct: 23 RIATKNLVPG 32


>sp|EF1B_METMA|ELONGATION factor 1-beta|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 KNVIPA 10
KNVIPA
Sbjct: 27 KNVIPA 32




59|Sequence|291|300|NVIPALELVE

>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 IPALELVE 10
IPALE+V+
Sbjct: 436 IPALEMVK 443


>sp|HIS4_METAR|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocella arvoryzae (strain

Query: 1 NVIPALEL 8
NVIPA++L
Sbjct: 4 NVIPAIDL 11


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IPALELVE 10
+PALE+V+
Sbjct: 318 VPALEMVK 325


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IPALELVE 10
+PALEL E
Sbjct: 729 VPALELFE 736


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 1 NVIPALELVE 10
NV+P ELV+
Sbjct: 179 NVLPTKELVD 188


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 1 NVIPALELVE 10
NV+P ELV+
Sbjct: 179 NVLPTKELVD 188


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NVIPALEL 8
N++PA+E+
Sbjct: 647 NIVPAVEV 654




60|Sequence|296|305|LELVEPIKKH

>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 2 ELVEPIKKH 10
ELVEPIK +
Sbjct: 434 ELVEPIKNN 442


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 LELVEPIKKH 10
L LV P+ KH
Sbjct: 98 LSLVNPVAKH 107


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 3 LVEPIKK 9
LVEP+KK
Sbjct: 81 LVEPLKK 87


>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 1 LELVEPIKK 9
LE+VEPI++
Sbjct: 153 LEIVEPIRE 161


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 2 ELVEPIKKH 10
+L+E IKKH
Sbjct: 441 QLIEDIKKH 449


>sp|SYY_PYRFU|TYROSINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LELVEPIKKH 10
++L+EPI+K+
Sbjct: 348 IDLLEPIRKY 357


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 3 LVEPIKK 9
L+EP+KK
Sbjct: 18 LIEPLKK 24


>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LELVEPIKK 9
++LVEP+KK
Sbjct: 2 IKLVEPLKK 10


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LVEPIKK 9
LVEP+KK
Sbjct: 626 LVEPVKK 632


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 4 VEPIKK 9
VEPIKK
Sbjct: 169 VEPIKK 174


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 LELVEPIKKH 10
+EL E +KKH
Sbjct: 239 IELAEQLKKH 248


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LELVEPIKKH 10
LEL+E +K H
Sbjct: 227 LELIENVKVH 236


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 LELVEPIKK 9
LEL+EP+++
Sbjct: 350 LELIEPLRE 358


>sp|FEN_THEPD|FLAP endonuclease 1|Thermofilum pendens (strain DSM 2475

Query: 2 ELVEPIKK 9
ELVEP+ K
Sbjct: 7 ELVEPVAK 14


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 2 ELVEPIKKH 10
ELVE KKH
Sbjct: 115 ELVELAKKH 123


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 LELVEPIKKH 10
L+LVEP++ +
Sbjct: 157 LKLVEPLRDY 166


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LELVEPIK 8
LE+V PIK
Sbjct: 337 LEMVTPIK 344


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 ELVEPIKKH 10
E+V+P+KK
Sbjct: 7 EIVDPVKKE 15


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELVEPIKKH 10
EL+E KKH
Sbjct: 132 ELIEEAKKH 140


>sp|DNLI2_METAC|DNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELVEPIKKH 10
+LVE I+KH
Sbjct: 287 DLVEIIRKH 295


>sp|URK_HALSA|URIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ELVEPIKKH 10
+ +EP K+H
Sbjct: 170 QFIEPTKRH 178


>sp|DNLI2_METBF|DNA ligase 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 ELVEPIKKH 10
+LVE I+KH
Sbjct: 287 DLVEIIRKH 295


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 ELVEPIKK 9
E++EPI+K
Sbjct: 333 EILEPIRK 340


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ELVEPIKK 9
E++EPI+K
Sbjct: 333 EILEPIRK 340


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ELVEPIKK 9
E++EPI+K
Sbjct: 333 EILEPIRK 340


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 ELVEPIKK 9
E++EPI+K
Sbjct: 333 EILEPIRK 340


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 ELVEPIKK 9
E++EPI+K
Sbjct: 333 EILEPIRK 340




61|Sequence|301|310|PIKKHEVPAK

>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PIKKHEVP 8
PI HEVP
Sbjct: 245 PIATHEVP 252


>sp|UPPS_PICTO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Picrophilus

Query: 2 IKKHEVPA 9
IKKH VP
Sbjct: 20 IKKHPVPG 27


>sp|Y1610_METJA|UNCHARACTERIZED glycosyl hydrolase MJ1610|Methanocaldococcus jannaschii (strain

Query: 4 KHEVPAK 10
KHEVP +
Sbjct: 450 KHEVPKR 456


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 PIKKHEVP 8
PI++HE P
Sbjct: 348 PIRRHEGP 355


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila

Query: 1 PIKKHEV 7
PIK+H++
Sbjct: 37 PIKEHQI 43


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 PIKKHE 6
P+KKHE
Sbjct: 372 PLKKHE 377


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 PIKKHE 6
P+KKHE
Sbjct: 372 PLKKHE 377


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 2 IKKHEVPA 9
+KK E+PA
Sbjct: 421 VKKQELPA 428


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 2 IKKHEVPA 9
+KK E+PA
Sbjct: 421 VKKQELPA 428


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KKHEVP 8
KKHE+P
Sbjct: 282 KKHEIP 287


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 KKHEVP 8
KKH++P
Sbjct: 504 KKHDIP 509


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 IKKHEVP 8
+K HEVP
Sbjct: 465 LKHHEVP 471


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IKKHEVPA 9
+K H+VPA
Sbjct: 42 VKGHDVPA 49




62|Sequence|306|315|EVPAKSDVYC

>sp|DAPF_ARCFU|DIAMINOPIMELATE epimerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVPAKSDVY 9
E+PAK+DV+
Sbjct: 131 EIPAKTDVW 139


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 1 EVPAKSDVY 9
E+P SDV+
Sbjct: 129 EIPCSSDVF 137


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 1 EVPAKSDVYC 10
EVP + VYC
Sbjct: 474 EVPVEKCVYC 483


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VPAKSDVYC 10
+P K VYC
Sbjct: 150 LPVKKSVYC 158


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 VPAKSDVYC 10
VPA++ V+C
Sbjct: 103 VPARNTVFC 111


>sp|PELO_DESA1|PROTEIN pelota homolog|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 VPAKSDV 8
VP KSDV
Sbjct: 325 VPGKSDV 331


>sp|UPP_SACI7|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|UPP_SACI4|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|UPP_SACI3|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|UPP_SACI2|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|UPP_SACI1|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVPAKSDVY 9
E+PA D+Y
Sbjct: 68 EIPANLDLY 76


>sp|UPP_SACI6|URACIL phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain ATCC

Query: 5 KSDVYC 10
K+D+YC
Sbjct: 197 KNDIYC 202


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 1 EVPAKSDVYC 10
EVP K YC
Sbjct: 50 EVPTKEIGYC 59


>sp|UPP_SACS2|URACIL phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 EVPAKSDVY 9
EVP DVY
Sbjct: 112 EVPKDMDVY 120


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 EVPAKSDVYC 10
E+P K +V C
Sbjct: 38 EIPRKGEVLC 47


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PAKSDVYC 10
PA+ D +C
Sbjct: 249 PAREDAFC 256




63|Sequence|311|320|SDVYCEVCEF

>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DVYCEVCEF 10
D YCE EF
Sbjct: 224 DSYCEYLEF 232


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDVYCEV 7
SDVYC+V
Sbjct: 117 SDVYCKV 123


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VYCEVCEF 10
V+C+VCEF
Sbjct: 197 VFCKVCEF 204


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 3 VYCEVCEF 10
V+C VCE+
Sbjct: 40 VFCPVCEY 47


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VYCEVCEF 10
V+C VCE+
Sbjct: 40 VFCPVCEY 47


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC 43049

Query: 2 DVYCEVCE 9
DVY EVC+
Sbjct: 344 DVYEEVCK 351


>sp|DPCKG_THEAC|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DVYCEVCE 9
D+ C VCE
Sbjct: 141 DLKCHVCE 148


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 3 VYCEVC 8
VYC VC
Sbjct: 1080 VYCPVC 1085


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 VYCEVC 8
VYC VC
Sbjct: 1705 VYCPVC 1710


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 4 YCEVCE 9
YC +CE
Sbjct: 563 YCPICE 568


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 4 YCEVCE 9
YC +CE
Sbjct: 564 YCPICE 569


>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 3 VYCEVCEF 10
VY E+CE+
Sbjct: 337 VYRELCEY 344


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 3 VYCEVCE 9
VYC CE
Sbjct: 566 VYCPNCE 572


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 3 VYCEVCE 9
VYC CE
Sbjct: 566 VYCPNCE 572


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DVYCEVCE 9
DVY CE
Sbjct: 81 DVYTHACE 88


>sp|CBIA_METAC|COBYRINATE a,c-diamide synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 DVYCEVCE 9
DVY CE
Sbjct: 84 DVYSHACE 91


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVYCE 6
D+YCE
Sbjct: 192 DIYCE 196


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 SDVYC 5
SDVYC
Sbjct: 66 SDVYC 70


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 DVYCEVCE 9
++Y EVC+
Sbjct: 340 EIYLEVCD 347


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 VYCEVCE 9
V+C VCE
Sbjct: 194 VHCGVCE 200


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 YCEVCEF 10
YC CEF
Sbjct: 116 YCPRCEF 122


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SDVYCEV 7
SD++C++
Sbjct: 38 SDIFCDI 44


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CEVCEF 10
CE+C F
Sbjct: 195 CEICGF 200


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 4 YCEVCE 9
YC +C+
Sbjct: 563 YCHICD 568


>sp|Y890_METJA|UPF0148 protein MJ0890|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VYCEVCE 9
+YC +CE
Sbjct: 55 IYCPICE 61


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DVYCEVCEF 10
++Y +VCE
Sbjct: 604 EIYSKVCEL 612


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DVYCEVCE 9
D +C VCE
Sbjct: 197 DTHCGVCE 204


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 3 VYCEVCEF 10
VY E+C +
Sbjct: 122 VYTEICNY 129


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 YCEVCE 9
YCE C+
Sbjct: 125 YCEKCD 130


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 YCEVCE 9
YCE C+
Sbjct: 125 YCEKCD 130


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVYCEVCE 9
D YC +C+
Sbjct: 168 DPYCVICK 175


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 YCEVCE 9
YCE C+
Sbjct: 125 YCEKCD 130




64|Sequence|316|325|EVCEFLVKEV

>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain

Query: 2 VCEFLVKE 9
VCE++VKE
Sbjct: 16 VCEYVVKE 23


>sp|Y194_PYRAB|UPF0146 protein PYRAB01940|Pyrococcus abyssi (strain GE5 /

Query: 1 EVCEFLVKEV 10
EV EF+ +EV
Sbjct: 3 EVAEFIAREV 12


>sp|Y150_METJA|UNCHARACTERIZED protein MJ0150|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVCEFLVK 8
E CEFLVK
Sbjct: 159 EYCEFLVK 166


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EVCEFLVKE 9
E+ EFL+KE
Sbjct: 164 ELKEFLIKE 172


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EVCEFLVK 8
++CE LVK
Sbjct: 56 DICEILVK 63


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 1 EVCEFLVKEV 10
EV +F+VKE+
Sbjct: 32 EVEDFIVKEI 41


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain

Query: 1 EVCEFLVKEV 10
EV +F+VKE+
Sbjct: 29 EVEDFIVKEI 38


>sp|FPOC_METMA|F(420)H(2) dehydrogenase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EVCEFL 6
EVCE+L
Sbjct: 40 EVCEYL 45


>sp|TRUD_METMA|PROBABLE tRNA pseudouridine synthase D|Methanosarcina mazei (strain ATCC

Query: 1 EVCEFLVKEV 10
E+ +F+VKE+
Sbjct: 29 EIEDFIVKEI 38


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 2 VCEFLVKE 9
V EFLVKE
Sbjct: 254 VKEFLVKE 261




65|Sequence|321|330|LVKEVTKLID

>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LVKEVTKLID 10
+VKEVT L D
Sbjct: 259 IVKEVTNLDD 268


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 1 LVKEVTKLID 10
+VKEVT L D
Sbjct: 259 IVKEVTNLDD 268


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 1 LVKEVTKLID 10
+VKEVT L D
Sbjct: 259 IVKEVTNLDD 268


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LVKEVTKLID 10
+VKEVT L D
Sbjct: 259 IVKEVTNLDD 268


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LVKEVTKLID 10
+VKEVT L D
Sbjct: 259 IVKEVTNLDD 268


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 LVKEVTKLID 10
+VKEVT L D
Sbjct: 259 IVKEVTNLDD 268


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VKEVTKLID 10
VKE+ +LID
Sbjct: 138 VKEMNRLID 146


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VKEVTKLID 10
VKE +KLID
Sbjct: 167 VKEFSKLID 175


>sp|Y095_METJA|UNCHARACTERIZED protein MJ0095|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LVKEVTKLID 10
+VKEV +LID
Sbjct: 52 IVKEVKELID 61


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LVKEVTKLID 10
++KEV LID
Sbjct: 171 IIKEVNNLID 180


>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 1 LVKEVTKLI 9
+VKEV KLI
Sbjct: 263 IVKEVAKLI 271


>sp|Y1325_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1325|Methanocaldococcus

Query: 2 VKEVTKLID 10
VKE+ KL+D
Sbjct: 79 VKEIIKLVD 87


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LVKEVTKLID 10
LVK+++K+ID
Sbjct: 133 LVKKLSKVID 142


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VKEVTKLID 10
VKE+ +LID
Sbjct: 140 VKEMQRLID 148




66|Sequence|326|335|TKLIDNNKTE

>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TKLIDNNKTE 10
KL+DNN E
Sbjct: 186 VKLLDNNMME 195


>sp|CH60_METBF|CHAPERONIN GroEL|Methanosarcina barkeri (strain Fusaro /

Query: 4 IDNNKT 9
IDNNKT
Sbjct: 324 IDNNKT 329


>sp|Y1642_METJA|UNCHARACTERIZED protein MJ1642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLIDNNKTE 10
+L+DN K+E
Sbjct: 132 RLVDNKKSE 140


>sp|RS4E_METMA|SMALL ribosomal subunit protein eS4|Methanosarcina mazei (strain ATCC

Query: 2 KLIDNNK 8
KL+DNN+
Sbjct: 48 KLVDNNR 54


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLIDNNK 8
KLI+NNK
Sbjct: 430 KLIENNK 436




67|Sequence|331|340|NNKTEKEILD

>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 NKTEKEILD 10
NK EKE++D
Sbjct: 112 NKAEKELVD 120


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KTEKEILD 10
+TEKE+LD
Sbjct: 204 ETEKEVLD 211


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 NKTEKEILD 10
N+TEK ILD
Sbjct: 555 NETEKRILD 563


>sp|GRPE_METS3|PROTEIN GrpE|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 NNKTEKEILD 10
N+KTEKE+ D
Sbjct: 102 NSKTEKELRD 111


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NNKTEKEILD 10
NN+ KEILD
Sbjct: 354 NNQQVKEILD 363


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NNKTEKEILD 10
NN+ KEILD
Sbjct: 354 NNQQVKEILD 363


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NNKTEKEILD 10
NN+ KEILD
Sbjct: 354 NNQQVKEILD 363


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NNKTEKEILD 10
NN+ KEILD
Sbjct: 354 NNQQVKEILD 363


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NNKTEKEILD 10
NN+ KEILD
Sbjct: 354 NNQQVKEILD 363


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NNKTEKEILD 10
NN+ KEILD
Sbjct: 354 NNQQVKEILD 363


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NKTEKEILD 10
K EKEILD
Sbjct: 348 TKLEKEILD 356


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 NNKTEKEI 8
+NKTE+EI
Sbjct: 416 SNKTEEEI 423


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NKTEKEILD 10
NK EKEI D
Sbjct: 244 NKAEKEISD 252


>sp|Y623_METJA|PROBABLE metallophosphoesterase MJ0623|Methanocaldococcus jannaschii

Query: 4 TEKEILD 10
T+KEILD
Sbjct: 72 TDKEILD 78


>sp|TRUD_THESM|PROBABLE tRNA pseudouridine synthase D|Thermococcus sibiricus (strain DSM

Query: 3 KTEKEILD 10
K E+EILD
Sbjct: 350 KIEREILD 357




68|Sequence|336|345|KEILDAFDKM

>sp|RPO11_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus horikoshii (strain ATCC

Query: 1 KEILDAFDKM 10
KE+LDA++K+
Sbjct: 83 KEVLDAWEKV 92


>sp|THI4_PYRFU|THIAMINE thiazole synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KEILDAFD 8
KEILD FD
Sbjct: 80 KEILDEFD 87


>sp|Y1717_ARCFU|UNCHARACTERIZED protein AF_1717|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EILDAFDKM 10
EILDA DK+
Sbjct: 32 EILDAIDKL 40


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 1 KEILDAFDK 9
KE+LD F+K
Sbjct: 194 KEVLDLFEK 202


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KEILDAFD 8
+EILD FD
Sbjct: 80 REILDEFD 87


>sp|RPO11_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus abyssi (strain GE5 /

Query: 1 KEILDAFDK 9
KE+LDA++K
Sbjct: 83 KEVLDAWEK 91


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 1 KEILDAFDK 9
+E+LDAF K
Sbjct: 190 RELLDAFAK 198


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KEILDAFDKM 10
+E LD FD+M
Sbjct: 220 EEALDLFDQM 229


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KEILDAFDK 9
KEI+D F+K
Sbjct: 553 KEIIDFFNK 561


>sp|NIKR3_METMA|PUTATIVE nickel-responsive regulator 3|Methanosarcina mazei (strain ATCC

Query: 2 EILDAFDK 9
E+LD FDK
Sbjct: 15 ELLDKFDK 22


>sp|NIKR2_METAC|PUTATIVE nickel-responsive regulator 2|Methanosarcina acetivorans (strain

Query: 2 EILDAFDK 9
E+LD FDK
Sbjct: 15 ELLDKFDK 22


>sp|DHAS_METJA|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEILDAFDKM 10
KE++D FD +
Sbjct: 268 KEVMDKFDPL 277


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 1 KEILDAFDK 9
K+++D +DK
Sbjct: 47 KQVIDPYDK 55


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 KEILDAFDKM 10
KE+L FDK+
Sbjct: 886 KEVLLPFDKL 895


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain

Query: 2 EILDAFDK 9
EILD +DK
Sbjct: 11 EILDNYDK 18


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KEILDAFD 8
KE+LD FD
Sbjct: 527 KELLDRFD 534


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 KEILDAFDKM 10
KE+L FDK+
Sbjct: 884 KEVLLPFDKL 893


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 KEILDAF 7
KE+LD+F
Sbjct: 439 KEVLDSF 445


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 KEILDAFDKM 10
KE+L FDK+
Sbjct: 885 KEVLLPFDKL 894


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 KEILDAFDKM 10
KE+L FDK+
Sbjct: 884 KEVLLPFDKL 893


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KEILDAFD 8
K+I+D FD
Sbjct: 83 KDIVDGFD 90


>sp|AROD_SULAC|3-DEHYDROQUINATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KEILDAFDK 9
KEI D FD+
Sbjct: 126 KEIFDKFDE 134


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 KEILDAFDK 9
KEI+DA+ K
Sbjct: 2 KEIVDAYFK 10


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ILDAFDKM 10
+ DAF+KM
Sbjct: 6 VTDAFEKM 13


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 LDAFDKM 10
LD FDKM
Sbjct: 219 LDRFDKM 225


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 2 EILDAFDK 9
EIL+ FDK
Sbjct: 6 EILEIFDK 13


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 KEILDAFDKM 10
KE+L FDK+
Sbjct: 208 KEVLLPFDKL 217




69|Sequence|341|350|AFDKMCSKLP

>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FDKMCSKLP 10
FD++C ++P
Sbjct: 291 FDRLCDEVP 299


>sp|RSMA_THEGJ|PROBABLE ribosomal RNA small subunit|Thermococcus gammatolerans (strain DSM

Query: 2 FDKMCSKLP 10
F+KM S LP
Sbjct: 104 FNKMVSNLP 112


>sp|RSMA_THEKO|PROBABLE ribosomal RNA small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 FDKMCSKLP 10
F+KM S LP
Sbjct: 104 FNKMVSNLP 112


>sp|RSMA_METMA|PROBABLE ribosomal RNA small subunit|Methanosarcina mazei (strain ATCC

Query: 2 FDKMCSKLP 10
FDK+ S LP
Sbjct: 101 FDKVVSNLP 109


>sp|RSMA_METBF|PROBABLE ribosomal RNA small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 FDKMCSKLP 10
FDK+ S LP
Sbjct: 111 FDKIVSNLP 119


>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 FDKMCSKLP 10
FDK+ S LP
Sbjct: 101 FDKVVSNLP 109


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 DKMCSKL 9
D++CSKL
Sbjct: 194 DRICSKL 200


>sp|THIL_METJA|THIAMINE-MONOPHOSPHATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDKMCSKLP 10
F+++C K P
Sbjct: 182 FERLCQKYP 190


>sp|RSMA_METST|PROBABLE ribosomal RNA small subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 FDKMCSKLP 10
FDK+ S LP
Sbjct: 106 FDKVVSNLP 114


>sp|Y835_METJA|UNCHARACTERIZED protein MJ0835|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KMCSKLP 10
K C KLP
Sbjct: 232 KQCGKLP 238


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AFDKMCSKL 9
AFD++C ++
Sbjct: 2 AFDEICDEI 10




70|Sequence|346|355|CSKLPKSLSE

>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 KLPKSLSE 10
KLPKSL+E
Sbjct: 223 KLPKSLNE 230


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 CSKLPKSLSE 10
C KLPK ++E
Sbjct: 194 CVKLPKHVAE 203


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KLPKSLSE 10
KLPK +SE
Sbjct: 182 KLPKEISE 189


>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 4 LPKSLSE 10
LPKSL+E
Sbjct: 123 LPKSLNE 129


>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CSKLPKSLSE 10
CS KSLSE
Sbjct: 41 CSDTIKSLSE 50


>sp|XERA_PYRHO|TYROSINE recombinase XerA|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LPKSLSE 10
LPKSL+E
Sbjct: 101 LPKSLTE 107




71|Sequence|351|360|KSLSEECQEV

***** No hits found ******


72|Sequence|356|365|ECQEVVDTYG

>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 ECQEVVDTYG 10
ECQEV D Y
Sbjct: 126 ECQEVYDIYA 135


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 1 ECQEVVDTYG 10
+CQEVVD +
Sbjct: 128 KCQEVVDIFA 137


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 ECQEVVDTYG 10
EC +V+D +G
Sbjct: 220 ECDKVIDIFG 229


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ECQEVVDTY 9
+C+ ++DTY
Sbjct: 177 DCERLIDTY 185


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 CQEVVDTYG 10
CQEVVD +
Sbjct: 125 CQEVVDIFA 133


>sp|G3PP_METKA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 ECQEVVDTYG 10
E QEVV YG
Sbjct: 48 ELQEVVKEYG 57


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CQEVVDTYG 10
CQEV++ Y
Sbjct: 125 CQEVINVYA 133


>sp|PHAC_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula marismortui (strain ATCC 43049

Query: 3 QEVVDTYG 10
Q+VVDT+G
Sbjct: 210 QDVVDTFG 217


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 3 QEVVDTYG 10
Q+VVDT+G
Sbjct: 210 QDVVDTFG 217


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QEVVDTYG 10
QEV+++YG
Sbjct: 139 QEVIESYG 146


>sp|TTRD_ARCFU|TAT proofreading chaperone TtrD|Archaeoglobus fulgidus (strain ATCC

Query: 1 ECQEVVDTYG 10
+C+E+++ +G
Sbjct: 28 DCREIIEKFG 37


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ECQEVVDTYG 10
+CQEVV+ +
Sbjct: 128 KCQEVVNIFA 137


>sp|MPTA_METAC|GTP cyclohydrolase MptA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ECQEVVDTYG 10
+CQEVV+ +
Sbjct: 128 KCQEVVNIFA 137


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ECQEVVDTYG 10
+ +++DTYG
Sbjct: 39 DINDIIDTYG 48


>sp|MPTA_METBF|GTP cyclohydrolase MptA|Methanosarcina barkeri (strain Fusaro /

Query: 1 ECQEVVDTYG 10
+CQEVV+ +
Sbjct: 128 KCQEVVNIFA 137


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ECQEVVDTYG 10
E EV+D YG
Sbjct: 616 EPNEVIDEYG 625


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 ECQEVVDTYG 10
EC+ VDT G
Sbjct: 132 ECRYSVDTSG 141


>sp|RNZ_PYRNV|RIBONUCLEASE Z|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 EVVDTYG 10
EV+D+YG
Sbjct: 105 EVMDSYG 111


>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ECQEVVDTYG 10
+ +++DTYG
Sbjct: 39 DIDDIIDTYG 48


>sp|AATE_THEAC|A-TYPE ATP synthase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 3 QEVVDTYG 10
QE++D YG
Sbjct: 79 QEILDQYG 86


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ECQEVVDTY 9
+C+E +D Y
Sbjct: 89 QCKECMDVY 97


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 3 QEVVDTYG 10
Q++VD YG
Sbjct: 445 QDLVDRYG 452


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ECQEVVDTYG 10
EC E++ YG
Sbjct: 356 ECLEMLGCYG 365


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 CQEVVDTYG 10
C+EV+ T+G
Sbjct: 54 CKEVLFTFG 62




73|Sequence|361|370|VDTYGSSILS

>sp|MTSB_METBA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina barkeri

Query: 1 VDTYGSSI 8
VDT+G+S+
Sbjct: 239 VDTFGNSV 246


>sp|CCA_PYRNV|CCA-ADDING enzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VDTYGSSILS 10
VD YGSS S
Sbjct: 47 VDMYGSSARS 56


>sp|Y834_METJA|UNCHARACTERIZED protein MJ0834|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDTYGSS 7
+DTYG+S
Sbjct: 135 LDTYGNS 141




74|Sequence|366|375|SSILSILLEE

***** No hits found ******


75|Sequence|371|380|ILLEEVSPEL

>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LEEVSPEL 10
+EE+ PEL
Sbjct: 118 IEEIGPEL 125


>sp|MAAL_HALMA|METHYLASPARTATE ammonia-lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LLEEVSPE 9
+LEE+SP+
Sbjct: 115 MLEEMSPQ 122


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum

Query: 1 ILLEEVSPEL 10
I +EEV+P++
Sbjct: 34 IFMEEVNPQV 43


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 2 LLEEVSPE 9
L+EEV+PE
Sbjct: 247 LIEEVTPE 254


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILLEEVSPEL 10
ILL+E+ PE+
Sbjct: 34 ILLDELEPEV 43


>sp|DNAG_METTH|DNA primase DnaG|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LLEEVSPE 9
++EEV+PE
Sbjct: 131 MMEEVTPE 138


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LLEEVSPE 9
L+E++SPE
Sbjct: 21 LIEKISPE 28


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 LLEEVSPEL 10
L+EEV P L
Sbjct: 167 LIEEVRPRL 175




76|Sequence|376|385|VSPELVCSML

>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VSPELVCSML 10
+SPEL+CS++
Sbjct: 64 MSPELICSII 73


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 VSPELVCSML 10
+SPE VC ++
Sbjct: 134 ISPERVCEII 143


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSPELVCSML 10
+SPEL+C ++
Sbjct: 64 MSPELICGIV 73


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 VSPELVCS 8
+ PE VCS
Sbjct: 25 IDPETVCS 32


>sp|DTDA_IGNH4|D-AMINOACYL-TRNA deacylase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PELVCSML 10
P L CS+L
Sbjct: 89 PSLACSLL 96


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 2 SPELVC 7
SPE+VC
Sbjct: 176 SPEVVC 181


>sp|Y996_METST|UPF0179 protein Msp_0996|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VSPELVC 7
+ PELVC
Sbjct: 121 IGPELVC 127




77|Sequence|381|390|VCSMLHLCSG

>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 MLHLCSG 10
+LHLC G
Sbjct: 281 LLHLCRG 287


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 4 MLHLCSG 10
+LHLC G
Sbjct: 281 LLHLCRG 287


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 4 MLHLCS 9
M+HLCS
Sbjct: 412 MVHLCS 417


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 1 VCSMLHLCSG 10
V S LH+C G
Sbjct: 135 VFSTLHICWG 144


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 SMLHLCSG 10
SM+H C G
Sbjct: 78 SMVHECQG 85


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SMLHLCSG 10
SML +C G
Sbjct: 308 SMLEICEG 315


>sp|Y883_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 5 LHLCSG 10
+HLC+G
Sbjct: 87 IHLCTG 92


>sp|HTPX_METJA|PROTEASE HtpX homolog|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCSMLHL 7
+C MLH+
Sbjct: 21 ICMMLHI 27


>sp|PGP_AERPE|PHOSPHOGLYCOLATE phosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 5 LHLCSG 10
+H+CSG
Sbjct: 85 VHICSG 90




78|Sequence|386|395|HLCSGTRLPA

>sp|SYH_THEAC|HISTIDINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LCSGTR 7
LCSGTR
Sbjct: 218 LCSGTR 223


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CSGTRLPA 10
C GT LP+
Sbjct: 717 CGGTHLPS 724


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CSGTRLPA 10
C GT LP+
Sbjct: 717 CGGTHLPS 724


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 CSGTRLPA 10
C GT LP+
Sbjct: 717 CGGTHLPS 724


>sp|Y2391_ARCFU|UNCHARACTERIZED protein AF_2391|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LCSGTRLPA 10
CSG R+P
Sbjct: 22 FCSGYRMPG 30


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CSGTRLPA 10
CS RLPA
Sbjct: 84 CSSLRLPA 91


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CSGTRLP 9
C GT LP
Sbjct: 719 CGGTHLP 725


>sp|P5CR_METSM|PYRROLINE-5-CARBOXYLATE reductase|Methanobrevibacter smithii

Query: 1 HLCSGTRL 8
H C+GT L
Sbjct: 94 HTCAGTDL 101


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CSGTRL 8
CSGTR+
Sbjct: 128 CSGTRI 133




79|Sequence|391|400|TRLPALTVHV

>sp|DTDA_THEKO|D-AMINOACYL-TRNA deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLPALTVHV 10
+LPALT HV
Sbjct: 85 KLPALTTHV 93


>sp|DTDA_PYRHO|D-AMINOACYL-TRNA deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RLPALTVHV 10
+LPALT HV
Sbjct: 85 KLPALTTHV 93


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 2 RLPALTVHV 10
+LPALT HV
Sbjct: 85 KLPALTTHV 93


>sp|DTDA_THEON|D-AMINOACYL-TRNA deacylase|Thermococcus onnurineus (strain NA1)

Query: 2 RLPALTVHV 10
+LPALT H+
Sbjct: 85 KLPALTTHI 93


>sp|DTDA_THEGJ|D-AMINOACYL-TRNA deacylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RLPALTVHV 10
++PALT HV
Sbjct: 85 KMPALTTHV 93


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RLPALTVHV 10
+LP+LT HV
Sbjct: 85 KLPSLTTHV 93


>sp|DTDA_METKA|D-AMINOACYL-TRNA deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 TRLPALTVHV 10
T+ P+LTVHV
Sbjct: 84 TKKPSLTVHV 93


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TRLPALTVH 9
+++P+LTVH
Sbjct: 52 SKIPSLTVH 60


>sp|DTDA_METS5|D-AMINOACYL-TRNA deacylase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TRLPALTVH 9
TR PA T+H
Sbjct: 52 TRTPAFTIH 60


>sp|HCGB_METJA|PYRIDINOL guanylyltransferase HcgB|Methanocaldococcus jannaschii (strain

Query: 1 TRLPALT 7
TR+PALT
Sbjct: 79 TRMPALT 85


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PALTVHV 10
PALTVHV
Sbjct: 76 PALTVHV 82


>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TRLPALTVH 9
++ PALTVH
Sbjct: 52 SKTPALTVH 60


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 LPALTVH 9
+P+LTVH
Sbjct: 54 IPSLTVH 60


>sp|SPEE1_HYPBU|POLYAMINE aminopropyltransferase 1|Hyperthermus butylicus (strain DSM 5456

Query: 4 PALTVH 9
PA+TVH
Sbjct: 72 PAMTVH 77




80|Sequence|396|405|LTVHVTQPKD

>sp|Y1556_METJA|UNCHARACTERIZED protein MJ1556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTVHVTQP 8
+TV VTQP
Sbjct: 224 ITVAVTQP 231


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTVHVTQPK 9
L VH+ +PK
Sbjct: 200 LRVHIIEPK 208


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 1 LTVHVTQP 8
+T+HVT+P
Sbjct: 44 ITLHVTRP 51


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 4 HVTQPKD 10
HV PKD
Sbjct: 132 HVVSPKD 138


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LTVHVT 6
LTVHVT
Sbjct: 78 LTVHVT 83


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 VHVTQPKD 10
VH+ PKD
Sbjct: 153 VHIDLPKD 160




81|Sequence|401|410|TQPKDGGFCE

>sp|FLAB1_ARCFU|PROBABLE flagellin 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PKDGGFCE 10
PKDG F E
Sbjct: 106 PKDGDFVE 113


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 TQPKDGG 7
T P+DGG
Sbjct: 406 TSPRDGG 412


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PKDGGFCE 10
PK GGF E
Sbjct: 74 PKKGGFKE 81


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 2 QPKDGG 7
+PKDGG
Sbjct: 93 KPKDGG 98


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PKDGG 7
PKDGG
Sbjct: 114 PKDGG 118


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PKDGGFCE 10
P+DGG+ +
Sbjct: 335 PEDGGYMQ 342


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 QPKDGGFCE 10
+P DG CE
Sbjct: 233 KPMDGVMCE 241


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TQPKDGG 7
T PK+GG
Sbjct: 91 TYPKEGG 97




82|Sequence|406|415|GGFCEVCKKL

>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 2 GFCEVCKK 9
G CE CKK
Sbjct: 57 GVCESCKK 64


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GFCEVCKK 9
GF E CKK
Sbjct: 514 GFVEACKK 521


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GGFCEVCKKL 10
G + E CKKL
Sbjct: 460 GNYLEFCKKL 469


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 1 GGFCEVCKK 9
GG C+ CK+
Sbjct: 13 GGSCQQCKR 21


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 GGFCEVCKK 9
GG C+ CK+
Sbjct: 13 GGSCQQCKR 21


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GGFCEVCKK 9
G C++CK+
Sbjct: 73 GNLCDICKE 81


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FCEVCKKL 10
F E+CKKL
Sbjct: 22 FLELCKKL 29


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GFCEVCKK 9
G CE CK+
Sbjct: 201 GVCESCKR 208


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CEVCKKL 10
CE CKKL
Sbjct: 158 CEGCKKL 164


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 4 CEVCKK 9
C+VCKK
Sbjct: 1033 CDVCKK 1038


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain ATCC

Query: 2 GFCEVC 7
G CEVC
Sbjct: 109 GVCEVC 114


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 GGFCEVC 7
GG CE C
Sbjct: 745 GGRCEAC 751


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GGFCEVC 7
GG C VC
Sbjct: 138 GGVCPVC 144


>sp|TFE_PYRIL|TRANSCRIPTION factor E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GGFCEVC 7
GG C VC
Sbjct: 138 GGVCPVC 144


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGFCEVC 7
GG C VC
Sbjct: 138 GGVCPVC 144


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 3 FCEVCKKL 10
FCE C+++
Sbjct: 396 FCEECREI 403


>sp|RLME_METBU|RIBOSOMAL RNA large subunit methyltransferase|Methanococcoides burtonii

Query: 1 GGFCEVCKKL 10
GG+ EV KK+
Sbjct: 50 GGWLEVAKKI 59


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGFCEVCKK 9
G CEVC +
Sbjct: 151 GDHCEVCGR 159


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GGFCEVCKK 9
G CEVC +
Sbjct: 151 GDHCEVCGR 159


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GGFCEVCKK 9
G CEVC +
Sbjct: 151 GDHCEVCGR 159


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GGFCEVCKK 9
G CEVC +
Sbjct: 151 GDHCEVCGR 159


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GGFCEVCKK 9
G CEVC +
Sbjct: 153 GDHCEVCGR 161


>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EVCKKL 10
EVCKKL
Sbjct: 349 EVCKKL 354


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GFCEVCKK 9
G C +CKK
Sbjct: 459 GTCIICKK 466


>sp|TFE_PYRCJ|TRANSCRIPTION factor E|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GGFCEVC 7
GG C +C
Sbjct: 138 GGVCPIC 144


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGFCEVCKKL 10
G +CE+ KK+
Sbjct: 612 GDWCELAKKV 621


>sp|TRPA_ARCFU|TRYPTOPHAN synthase alpha chain|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGFCEVCKK 9
G F EVC +
Sbjct: 122 GDFVEVCSR 130


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 CEVCKK 9
CE C+K
Sbjct: 191 CEACRK 196


>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 2 GFCEVCK 8
G CE+C+
Sbjct: 77 GKCEICR 83


>sp|ENO_THEVO|ENOLASE volcanium (strain ATCC 51530

Query: 2 GFCEVCKKL 10
GF E+ KK+
Sbjct: 284 GFAEITKKI 292


>sp|RNP4_METST|RIBONUCLEASE P protein component 4|Methanosphaera stadtmanae (strain ATCC

Query: 1 GGFCEVCKKL 10
G FC+ C K
Sbjct: 60 GRFCKNCNKF 69


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GFCEVCKKL 10
G +VC+KL
Sbjct: 173 GVADVCRKL 181


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GFCEVC 7
G C+VC
Sbjct: 146 GICDVC 151


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GFCEVC 7
G C+VC
Sbjct: 146 GICDVC 151


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 4 CEVCKK 9
CE+C K
Sbjct: 630 CEICMK 635


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GGFCEVC 7
GG C +C
Sbjct: 138 GGTCPIC 144


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 3 FCEVCKKL 10
FC++ KK+
Sbjct: 474 FCDLAKKM 481


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 CEVCKK 9
C VCKK
Sbjct: 466 CVVCKK 471


>sp|KPTA_METBF|PROBABLE RNA 2'-phosphotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GGFCEVCKK 9
GG C CK+
Sbjct: 13 GGSCLQCKR 21


>sp|RNP4_PICTO|RIBONUCLEASE P protein component 4|Picrophilus torridus (strain ATCC 700027

Query: 3 FCEVCK 8
+C+VCK
Sbjct: 47 YCKVCK 52


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GFCEVCKK 9
G C CKK
Sbjct: 142 GICPHCKK 149


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GFCEVCK 8
G+C+ CK
Sbjct: 53 GYCKKCK 59


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 GFCEVCKKL 10
G CEVC +L
Sbjct: 593 GGCEVCIEL 601




83|Sequence|411|420|VCKKLVGYLD

>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 KKLVGYLD 10
++L+GYLD
Sbjct: 11 ERLIGYLD 18


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KKLVGYLD 10
+K+VGY+D
Sbjct: 364 RKVVGYMD 371


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 KKLVGYL 9
+KLVGYL
Sbjct: 246 QKLVGYL 252


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 KKLVGYLD 10
KKLV Y+D
Sbjct: 261 KKLVKYID 268


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 KKLVGYLD 10
KKLV Y+D
Sbjct: 258 KKLVKYID 265


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KKLVGYLD 10
KKLV Y+D
Sbjct: 258 KKLVKYID 265


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 KKLVGYLD 10
KKLV Y+D
Sbjct: 258 KKLVKYID 265


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KKLVGYLD 10
+K+VGY D
Sbjct: 362 RKIVGYYD 369


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 KKLVGYLD 10
+K+VGY D
Sbjct: 369 RKIVGYYD 376


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 KKLVGYLD 10
KKL+ YLD
Sbjct: 135 KKLLDYLD 142


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VCKKLVGY 8
+C+ L GY
Sbjct: 18 ICRNLCGY 25


>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 3 KKLVGYL 9
K+LVGY+
Sbjct: 161 KRLVGYI 167


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 KKLVGYLD 10
KK+ GY D
Sbjct: 369 KKIAGYYD 376


>sp|Y1777_THEGJ|UPF0292 protein TGAM_1777|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VCKKLVGYLD 10
+ KKLV YL+
Sbjct: 77 LAKKLVSYLE 86




84|Sequence|416|425|VGYLDRNLEK

>sp|RL1_METST|LARGE ribosomal subunit protein uL1|Methanosphaera stadtmanae (strain

Query: 4 LDRNLEK 10
LDRNLEK
Sbjct: 185 LDRNLEK 191


>sp|DTDA_PYRAB|D-AMINOACYL-TRNA deacylase|Pyrococcus abyssi (strain GE5 /

Query: 3 YLDRNLEK 10
YLDR +EK
Sbjct: 58 YLDREIEK 65


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 GYLDRNLE 9
GYLD N E
Sbjct: 264 GYLDTNYE 271


>sp|APGM_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GYLDRNLE 9
GYLD N E
Sbjct: 264 GYLDTNYE 271


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GYLDRNLE 9
GYLD N E
Sbjct: 264 GYLDTNYE 271


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GYLDRNLEK 10
GY D ++EK
Sbjct: 23 GYTDEDMEK 31


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YLDRNL 8
Y+DRNL
Sbjct: 51 YMDRNL 56


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GYLDRNLEK 10
GY D ++EK
Sbjct: 23 GYTDEDMEK 31


>sp|RIFK_HALWD|RIBOFLAVIN kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GYLDRNL 8
GYLDR++
Sbjct: 58 GYLDRDV 64


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 VGYLDRNL 8
VG+LDR +
Sbjct: 814 VGFLDREI 821


>sp|SYR_KORCO|ARGININE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GYLDRNLEK 10
G++DR +EK
Sbjct: 303 GWVDRAIEK 311


>sp|MFNA_THEKO|L-ASPARTATE decarboxylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YLDRNL 8
Y+DRNL
Sbjct: 50 YIDRNL 55


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YLDRNL 8
Y+DRNL
Sbjct: 51 YIDRNL 56


>sp|RSMA_METAC|PROBABLE ribosomal RNA small subunit|Methanosarcina acetivorans (strain

Query: 1 VGYLDR 6
+GYLDR
Sbjct: 24 IGYLDR 29


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 VGYLDRNLEK 10
VG++D NL++
Sbjct: 609 VGWIDENLKQ 618


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 2 GYLDRNLEK 10
GY D ++EK
Sbjct: 23 GYSDEDMEK 31


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 YLDRNL 8
Y+DRNL
Sbjct: 52 YIDRNL 57


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 2 GYLDRNLEK 10
GY D ++EK
Sbjct: 23 GYSDEDMEK 31


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 GYLDRNLEK 10
GY D ++EK
Sbjct: 23 GYSDEDMEK 31


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGYLDRNLE 9
VG LD+NL+
Sbjct: 503 VGILDKNLK 511


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGYLDRNLEK 10
+GY+ R +EK
Sbjct: 39 MGYVHRGIEK 48


>sp|DTDA_PYRFU|D-AMINOACYL-TRNA deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YLDRNLEK 10
YLD+ +EK
Sbjct: 58 YLDKEIEK 65


>sp|ILVD_META3|DIHYDROXY-ACID dehydratase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GYLDRNLEK 10
GY D +EK
Sbjct: 23 GYTDEEIEK 31


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 2 GYLDRNLEK 10
GY+D L+K
Sbjct: 799 GYIDAELDK 807


>sp|Y1616_ARCFU|UNCHARACTERIZED protein AF_1616|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LDRNLE 9
LDRNLE
Sbjct: 31 LDRNLE 36


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 3 YLDRNL 8
Y+DRNL
Sbjct: 334 YIDRNL 339




85|Sequence|421|430|RNLEKNSTKQ

>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RNLEKNSTKQ 10
+NLEKN K+
Sbjct: 43 KNLEKNGIKE 52




86|Sequence|426|435|NSTKQEILAA

>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 NSTKQEIL 8
NSTK+EI+
Sbjct: 117 NSTKEEIM 124


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NSTKQEI 7
NSTK+EI
Sbjct: 117 NSTKEEI 123




87|Sequence|431|440|EILAALEKGC

>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EILAALEK 8
EI+AA+EK
Sbjct: 304 EIMAAVEK 311


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ALEKGC 10
ALEKGC
Sbjct: 35 ALEKGC 40


>sp|CDC6K_HALMA|ORC1-TYPE DNA replication protein 11|Haloarcula marismortui (strain ATCC

Query: 2 ILAALEK 8
ILAALEK
Sbjct: 381 ILAALEK 387


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 5 ALEKGC 10
ALEKGC
Sbjct: 35 ALEKGC 40


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 EILAALEKGC 10
E+ AAL KGC
Sbjct: 613 EVTAALCKGC 622


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EILAALEKG 9
E LAALEK
Sbjct: 406 ETLAALEKA 414


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EILAALEKG 9
E+LA +EKG
Sbjct: 139 EVLARVEKG 147


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EILAALEK 8
E LAALEK
Sbjct: 406 ETLAALEK 413


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 1 EILAALEKGC 10
EIL A KGC
Sbjct: 180 EILIARGKGC 189


>sp|Y941_METKA|UNCHARACTERIZED methyltransferase MK0941|Methanopyrus kandleri (strain AV19 /

Query: 2 ILAALEKG 9
+LAALE+G
Sbjct: 219 VLAALERG 226


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EILAALEK 8
EILAA+E+
Sbjct: 40 EILAAIER 47




88|Sequence|436|445|LEKGCSFLPD

>sp|TRPA_METTM|TRYPTOPHAN synthase alpha chain|Methanothermobacter marburgensis (strain

Query: 3 KGCSFLP 9
+GC+F+P
Sbjct: 11 EGCAFVP 17


>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 1 LEKGCSFLPD 10
LE+G F PD
Sbjct: 195 LEEGSIFTPD 204


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 CSFLP 9
CSFLP
Sbjct: 218 CSFLP 222


>sp|TRPA_METTH|TRYPTOPHAN synthase alpha chain|Methanothermobacter thermautotrophicus

Query: 4 GCSFLP 9
GC+F+P
Sbjct: 18 GCAFVP 23


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 GCSFLP 9
GC+F+P
Sbjct: 209 GCAFVP 214


>sp|Y1183_METJA|UNCHARACTERIZED protein MJ1183|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EKGCSFLPD 10
+K C F+PD
Sbjct: 57 DKECYFIPD 65


>sp|CARA_METVS|CARBAMOYL phosphate synthase small chain|Methanococcus vannielii (strain ATCC

Query: 1 LEKGCS 6
LE+GCS
Sbjct: 189 LERGCS 194


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 EKGCSFL 8
+KGCS L
Sbjct: 193 DKGCSLL 199


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 1 LEKGCSFLPD 10
+++GC LP+
Sbjct: 33 VQEGCVMLPE 42




89|Sequence|441|450|SFLPDPYQKQ

>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 FLPDPYQKQ 10
FLPDP + Q
Sbjct: 255 FLPDPIEAQ 263


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 2 FLPDPYQKQ 10
FLPDP+ +Q
Sbjct: 295 FLPDPHVRQ 303


>sp|Y1177_METJA|PUTATIVE transport protein MJ1177|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SFLPDPYQKQ 10
SF+PD Y+++
Sbjct: 171 SFVPDEYKEK 180


>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FLPDPYQKQ 10
FLP+ Y+K+
Sbjct: 111 FLPEAYEKE 119


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FLPDPYQKQ 10
FLP+ Y+K+
Sbjct: 111 FLPEAYEKE 119


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 FLPDPYQKQ 10
++PDP KQ
Sbjct: 156 YIPDPLMKQ 164


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FLPDPYQKQ 10
FLP+ Y+K+
Sbjct: 111 FLPEAYEKE 119


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 FLPDPYQKQ 10
FLP+ Y+K+
Sbjct: 111 FLPEAYEKE 119


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FLPDPYQKQ 10
F +PYQK+
Sbjct: 524 FYSNPYQKE 532


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FLPDPY 7
FLP PY
Sbjct: 40 FLPSPY 45


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 1 SFLPDPY 7
S +PDPY
Sbjct: 100 SAIPDPY 106


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SFLPDPY 7
SF+P PY
Sbjct: 217 SFVPQPY 223


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 SFLPDPY 7
+FLP+PY
Sbjct: 348 AFLPNPY 354


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 FLPDPYQKQ 10
F+P+PY ++
Sbjct: 38 FVPEPYARE 46


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 SFLPDPY 7
S +PDPY
Sbjct: 101 SAIPDPY 107


>sp|TPIS_PYRCJ|TRIOSEPHOSPHATE isomerase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 DPYQK 9
DPYQK
Sbjct: 210 DPYQK 214


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SFLPDP 6
+FLPDP
Sbjct: 150 NFLPDP 155


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 SFLPDPY 7
SF+P PY
Sbjct: 217 SFVPKPY 223


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 SFLPDPYQKQ 10
+F+P PY ++
Sbjct: 424 TFVPSPYVEE 433


>sp|DCDB_METLZ|DCTP deaminase, dUMP-forming|Methanocorpusculum labreanum (strain ATCC

Query: 5 DPYQKQ 10
DPYQK+
Sbjct: 51 DPYQKE 56


>sp|IXTPA_PICTO|DITP/XTP pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 2 FLPDPYQK 9
F+PD Y K
Sbjct: 141 FIPDGYDK 148


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SFLPDPY 7
SF+P PY
Sbjct: 217 SFVPRPY 223


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SFLPDPYQK 9
SFLPD +K
Sbjct: 428 SFLPDEIKK 436




90|Sequence|446|455|PYQKQCDQFV

>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+FV
Sbjct: 18 PYEKAVDEFV 27


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+FV
Sbjct: 18 PYEKAVDEFV 27


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+FV
Sbjct: 18 PYEKAVDEFV 27


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+F+
Sbjct: 18 PYEKAVDEFI 27


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+F+
Sbjct: 18 PYEKAVDEFI 27


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+F+
Sbjct: 18 PYEKAVDEFI 27


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 PYQKQCDQFV 10
PY+K D+F+
Sbjct: 18 PYEKAVDEFI 27


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 1 PYQKQCDQFV 10
PY+K D+FV
Sbjct: 58 PYKKDRDRFV 67


>sp|Y2399_ARCFU|UNCHARACTERIZED tRNA/rRNA methyltransferase AF_2399|Archaeoglobus fulgidus (strain

Query: 1 PYQKQCD 7
P +KQCD
Sbjct: 186 PVKKQCD 192


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 PYQKQCDQFV 10
P KQ DQ++
Sbjct: 199 PTAKQADQYI 208


>sp|RPO11_METAC|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanosarcina acetivorans (strain

Query: 5 QCDQFV 10
QCD+F+
Sbjct: 78 QCDEFI 83


>sp|Y3004_HALWD|UPF0179 protein HQ_3004A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PYQKQC 6
PY+KQC
Sbjct: 31 PYRKQC 36


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QKQCD 7
QKQCD
Sbjct: 1493 QKQCD 1497




91|Sequence|451|460|CDQFVAEYEP

>sp|PORA_PYRAB|PYRUVATE synthase subunit PorA|Pyrococcus abyssi (strain GE5 /

Query: 2 DQFVAEYEP 10
D+F+ EYEP
Sbjct: 188 DEFLGEYEP 196


>sp|PORA_PYRHO|PYRUVATE synthase subunit PorA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DQFVAEYEP 10
D+F+ EYEP
Sbjct: 188 DEFLGEYEP 196


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DQFVAEYEP 10
D+F+ EYEP
Sbjct: 188 DEFLGEYEP 196


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DQFVAEYEP 10
D FVAE EP
Sbjct: 20 DDFVAEEEP 28


>sp|RPO11_METTP|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanothrix thermoacetophila

Query: 1 CDQFVAEYE 9
CD+F+ EYE
Sbjct: 79 CDEFLREYE 87


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 DQFVAEYEP 10
D+F AE++P
Sbjct: 524 DEFHAEFDP 532


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 2 DQFVAEYEP 10
D+F AE++P
Sbjct: 524 DEFHAEFDP 532


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CDQFVAEYE 9
CD+++ +YE
Sbjct: 41 CDEYMPDYE 49


>sp|RS2_METTP|SMALL ribosomal subunit protein uS2|Methanothrix thermoacetophila

Query: 3 QFVAEYEP 10
+F+A YEP
Sbjct: 67 KFLANYEP 74


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CDQFVAEYE 9
CD+++ +YE
Sbjct: 41 CDEYMPDYE 49


>sp|AATB1_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DQFVAEYE 9
+QF+AE+E
Sbjct: 190 NQFMAEFE 197


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CDQFVAEYE 9
CD+++ +YE
Sbjct: 41 CDEYMPDYE 49


>sp|RL1_METMA|LARGE ribosomal subunit protein uL1|Methanosarcina mazei (strain ATCC

Query: 1 CDQFVAEYE 9
CD F+AE +
Sbjct: 103 CDLFIAETQ 111


>sp|RL1_METBF|LARGE ribosomal subunit protein uL1|Methanosarcina barkeri (strain Fusaro

Query: 1 CDQFVAEYE 9
CD F+AE +
Sbjct: 103 CDLFIAETQ 111


>sp|RL1_METAC|LARGE ribosomal subunit protein uL1|Methanosarcina acetivorans (strain

Query: 1 CDQFVAEYE 9
CD F+AE +
Sbjct: 103 CDLFIAETQ 111


>sp|RS2_METJA|SMALL ribosomal subunit protein uS2|Methanocaldococcus jannaschii

Query: 3 QFVAEYEP 10
+F+A YEP
Sbjct: 58 KFLARYEP 65


>sp|RS2_METLZ|SMALL ribosomal subunit protein uS2|Methanocorpusculum labreanum

Query: 3 QFVAEYEP 10
+F+A YEP
Sbjct: 65 KFLARYEP 72


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 CDQFVA 6
CDQF+A
Sbjct: 167 CDQFLA 172


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 2 DQFVAEYEP 10
D+F+ +Y P
Sbjct: 446 DKFIKKYHP 454


>sp|RL1_METBU|LARGE ribosomal subunit protein uL1|Methanococcoides burtonii (strain DSM

Query: 1 CDQFVAEYE 9
CD F+AE +
Sbjct: 103 CDFFIAEVQ 111


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 DQFVAEYE 9
D FV EYE
Sbjct: 353 DDFVVEYE 360


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DQFVAEYEP 10
DQ+V +Y P
Sbjct: 453 DQYVEQYLP 461


>sp|ENO2_METHJ|ENOLASE 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CDQFVAE 7
CD F+A+
Sbjct: 371 CDSFIAD 377


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CDQFVAEYE 9
CD+ + +YE
Sbjct: 36 CDEVMVDYE 44


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CDQFVAEYE 9
CD+ + +YE
Sbjct: 36 CDEVMVDYE 44


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CDQFVAEYE 9
CD+ + +YE
Sbjct: 35 CDEVMIDYE 43


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 CDQFVAEYE 9
CD+ +++YE
Sbjct: 36 CDEVMSDYE 44


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CDQFVAEYE 9
CD+ + +YE
Sbjct: 37 CDEVMVDYE 45




92|Sequence|456|465|AEYEPVLIEI

>sp|AROD_METMJ|3-DEHYDROQUINATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AEYEPVLIEI 10
AEY P IEI
Sbjct: 17 AEYNPTFIEI 26


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AEYEPVL 7
EYEP+L
Sbjct: 118 GEYEPIL 124


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 AEYEPVLIEI 10
A+YEPV+ E+
Sbjct: 2 AKYEPVIPEL 11


>sp|BIOU_HALMT|(S)-8-AMINO-7-OXONONANOATE synthase BioU|Haloferax mediterranei (strain ATCC 33500

Query: 1 AEYEPVLIEI 10
AE+E VLI++
Sbjct: 136 AEFEGVLIDV 145


>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 3 YEPVLIE 9
YEPVL++
Sbjct: 498 YEPVLVK 504


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 4 EPVLIEI 10
EPVLIE+
Sbjct: 23 EPVLIEV 29


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 YEPVLI 8
YEPVL+
Sbjct: 133 YEPVLV 138




93|Sequence|461|470|VLIEILVEVM

>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LIEILVEV 9
LIE+LVEV
Sbjct: 428 LIELLVEV 435


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LIEILVEV 9
LIE+LVEV
Sbjct: 429 LIELLVEV 436


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LIEILVEVM 10
LIE VEVM
Sbjct: 562 LIEAFVEVM 570




94|Sequence|466|475|LVEVMDPSFV

>sp|RL14E_METM7|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 LVEVMDPSFV 10
+VEV+D +FV
Sbjct: 24 IVEVLDKNFV 33


>sp|RL14E_METM5|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 LVEVMDPSFV 10
+VEV+D +FV
Sbjct: 24 IVEVLDKNFV 33


>sp|RL14E_METMP|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 LVEVMDPSFV 10
+VEV+D +FV
Sbjct: 24 IVEVLDKNFV 33


>sp|RL14E_METM6|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 1 LVEVMDPSFV 10
+VEV+D +FV
Sbjct: 24 IVEVLDKNFV 33


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LVEVMDPSF 9
LVEV+ P F
Sbjct: 131 LVEVLTPDF 139


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain ATCC

Query: 1 LVEVMDPSFV 10
L+EV++P V
Sbjct: 91 LIEVLEPDVV 100


>sp|KADA_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 LVEVMDPSFV 10
++EV++P+F+
Sbjct: 105 VIEVINPNFI 114


>sp|KADA_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LVEVMDPSFV 10
++E+++P+F+
Sbjct: 105 VIEILNPNFI 114


>sp|RL14E_HYPBU|LARGE ribosomal subunit protein eL14|Hyperthermus butylicus (strain DSM

Query: 1 LVEVMDPSFV 10
+VE++D +FV
Sbjct: 24 IVEIIDDNFV 33




95|Sequence|471|480|DPSFVCLKIG

>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PSFVCLKIG 10
PS +C KIG
Sbjct: 21 PSIICEKIG 29


>sp|SYFA_METKA|PHENYLALANINE--TRNA ligase alpha subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DPSFVCLKIG 10
DP VCL G
Sbjct: 478 DPDVVCLAWG 487


>sp|OGT_METVM|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus vulcanius (strain ATCC

Query: 1 DPSFVCLKIG 10
+P+ +C+K+G
Sbjct: 42 EPNKMCMKVG 51


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DPSFVCLKI 9
DP+ +C+K+
Sbjct: 1202 DPNDICMKM 1210


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 1 DPSFVCLKI 9
DP VCL +
Sbjct: 25 DPGAVCLAV 33


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 1 DPSFVCLKIG 10
D S+ C K+G
Sbjct: 223 DSSYFCSKLG 232


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPSFVCLKI 9
D VCLK+
Sbjct: 799 DDQIVCLKV 807




96|Sequence|476|485|CLKIGACPSA

>sp|THYX_PYRHO|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CLKIGACP 8
C+++G CP
Sbjct: 212 CIQLGYCP 219


>sp|THYX_PYRAB|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 CLKIGACP 8
C+++G CP
Sbjct: 212 CIQLGYCP 219


>sp|THYX_THEON|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 CLKIGACPSA 10
C+++G CP
Sbjct: 215 CVQLGYCPEG 224


>sp|THYX_THEKO|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CLKIGACPSA 10
C+++G CP
Sbjct: 215 CVQLGYCPEG 224


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 CLKIGACPSA 10
CL GAC +A
Sbjct: 160 CLAYGACDAA 169


>sp|THYX_PYRFU|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CLKIGACP 8
C++ G CP
Sbjct: 212 CIQFGYCP 219


>sp|Y2425_METAR|PROTEIN UNCMA_24250|Methanocella arvoryzae (strain DSM 22066

Query: 1 CLKIGACPSA 10
CLK G P A
Sbjct: 158 CLKAGISPDA 167


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 CLKIGAC 7
C++ GAC
Sbjct: 95 CVRCGAC 101


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 CLKIGAC 7
C++ GAC
Sbjct: 91 CVRCGAC 97


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 1 CLKIGACPS 9
C++ GAC S
Sbjct: 44 CMQCGACAS 52


>sp|Y1807_METBF|PROTEIN Mbar_A1807|Methanosarcina barkeri (strain Fusaro /

Query: 1 CLKIGACPSA 10
CLK G P A
Sbjct: 161 CLKAGLLPDA 170


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 1 CLKIGACPSA 10
C++ GAC ++
Sbjct: 41 CIQCGACTAS 50


>sp|ILVD_METM6|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C6 /

Query: 1 CLKIGACPSA 10
C++ ACP A
Sbjct: 179 CIEDCACPGA 188


>sp|Y484_METMA|PROTEIN MM_0484|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CLKIGACPSA 10
C+K G P A
Sbjct: 161 CMKAGLSPDA 170


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus (strain

Query: 1 CLKIGACPS 9
+ IGACP+
Sbjct: 96 VIAIGACPT 104




97|Sequence|481|490|ACPSAHKPLL

>sp|DTDA_HALMA|D-AMINOACYL-TRNA deacylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ACPSAHKPLL 10
ACP AHK ++
Sbjct: 111 ACPGAHKAVV 120


>sp|Y644_METJA|UNCHARACTERIZED protein MJ0644|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPSAHKPL 9
CP+A KPL
Sbjct: 130 CPNAGKPL 137


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 CPSAHKP 8
CP HKP
Sbjct: 678 CPKCHKP 684


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ACPSAHKPLL 10
ACP+AH ++
Sbjct: 102 ACPNAHHAVV 111


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ACPSAHKPLL 10
ACP+AH ++
Sbjct: 102 ACPNAHHAVV 111


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 2 CPSAHKP 8
CP+ +KP
Sbjct: 170 CPACNKP 176


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 2 CPSAHKP 8
CP+ +KP
Sbjct: 59 CPNCNKP 65


>sp|Y282_ARCFU|UPF0212 protein AF_0282|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ACPSAHKPL 9
ACP + PL
Sbjct: 50 ACPKCNSPL 58




98|Sequence|486|495|HKPLLGTEKC

>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HKPLLGTE 8
HK +LGTE
Sbjct: 82 HKNMLGTE 89


>sp|Y1081_METJA|UPF0047 protein MJ1081|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPLLGT 7
KPLLGT
Sbjct: 108 KPLLGT 113


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 KPLLGTEKC 10
KPL+G C
Sbjct: 98 KPLVGVNHC 106


>sp|SYFB_PYRAE|PHENYLALANINE--TRNA ligase beta subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PLLGTEKC 10
P+LG+E C
Sbjct: 204 PVLGSECC 211


>sp|Y1464_METJA|UNCHARACTERIZED GTP-binding protein MJ1464|Methanocaldococcus jannaschii (strain

Query: 2 KPLLGTEK 9
KP+LG+E+
Sbjct: 310 KPVLGSEE 317


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HKPLLGTEK 9
H PL TEK
Sbjct: 166 HAPLTETEK 174


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 HKPLLGTE 8
HKP +G E
Sbjct: 146 HKPSIGVE 153


>sp|PORD_METJA|PYRUVATE synthase subunit PorD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KPLLGTEKC 10
+P+L EKC
Sbjct: 26 RPILDNEKC 34




99|Sequence|491|500|GTEKCIWGPS

>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 3 EKCIWGPS 10
E C+WG S
Sbjct: 278 ENCLWGES 285


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 3 EKCIWGPS 10
E C+WG S
Sbjct: 278 ENCLWGES 285


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 IWGPS 10
IWGPS
Sbjct: 543 IWGPS 547


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 EKCIWGPS 10
E CIW S
Sbjct: 279 ENCIWAES 286


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 3 EKCIWGPS 10
E CIW S
Sbjct: 276 ENCIWAES 283


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 EKCIWGPS 10
EKC WG +
Sbjct: 100 EKCRWGAA 107


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 2 TEKCIWG 8
T +C+WG
Sbjct: 349 TSQCLWG 355


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans

Query: 1 GTEKCIWGPS 10
G E IW PS
Sbjct: 44 GEEYRIWNPS 53


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 EKCIWGPS 10
E CIW S
Sbjct: 277 ENCIWNES 284


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 GTEKCIWGP 9
GT CI GP
Sbjct: 134 GTYACIEGP 142


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 GTEKCIW 7
G EKC+W
Sbjct: 292 GGEKCLW 298


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 1 GTEKCIW 7
G EKC+W
Sbjct: 292 GGEKCLW 298


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTEKCIWGPS 10
G E+C+ G S
Sbjct: 38 GAERCVLGLS 47


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GTEKCIWGPS 10
G E+C+ G S
Sbjct: 38 GAERCVLGLS 47


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EKCIWGPS 10
E CIW S
Sbjct: 277 ENCIWPES 284


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 1 GTEKCIWGPS 10
GT++ W PS
Sbjct: 449 GTKRLYWRPS 458


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 TEKCIW 7
TEK IW
Sbjct: 243 TEKAIW 248


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 EKCIWGPS 10
E CIW S
Sbjct: 277 ENCIWPES 284


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 EKCIWGPS 10
E CIW S
Sbjct: 277 ENCIWPES 284


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTEKCIWGP 9
GT CI GP
Sbjct: 152 GTYVCIEGP 160


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 GTEKCIW 7
GT+KC++
Sbjct: 266 GTKKCLY 272


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTEKCIWGP 9
GT CI GP
Sbjct: 165 GTYVCIEGP 173


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTEKCIWGP 9
GT CI GP
Sbjct: 152 GTYVCIEGP 160




100|Sequence|496|505|IWGPSYWCQN

>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 GPSYWC 8
GP YWC
Sbjct: 184 GPVYWC 189


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GPSYWC 8
GP YWC
Sbjct: 201 GPVYWC 206


>sp|RIFK_METKA|RIBOFLAVIN kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 IWGPSYW 7
+WGPS W
Sbjct: 127 VWGPSTW 133


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 3 GPSYW 7
GP+YW
Sbjct: 384 GPNYW 388


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 4 PSYWCQ 9
PS WC+
Sbjct: 449 PSCWCE 454


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WGPSY 6
WGP+Y
Sbjct: 402 WGPNY 406


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei

Query: 2 WGPSYWCQN 10
WG ++C++
Sbjct: 57 WGGQFFCED 65


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 2 WGPSYWCQ 9
WG ++W Q
Sbjct: 178 WGTTFWSQ 185


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 WGPSYWCQ 9
WG ++W Q
Sbjct: 178 WGNAFWSQ 185


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 PSYWC 8
P YWC
Sbjct: 167 PVYWC 171


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PSYWC 8
P YWC
Sbjct: 167 PVYWC 171


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PSYWC 8
P YWC
Sbjct: 167 PVYWC 171


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PSYWC 8
P YWC
Sbjct: 167 PVYWC 171


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GPSYWC 8
GP WC
Sbjct: 210 GPVIWC 215




101|Sequence|501|510|YWCQNTETAA

>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 1 YWCQNTE 7
YW QNTE
Sbjct: 390 YWLQNTE 396


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YWCQNTE 7
YW QNTE
Sbjct: 390 YWLQNTE 396


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YWCQNTE 7
YW QNTE
Sbjct: 390 YWLQNTE 396


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 YWCQNTE 7
YW QNTE
Sbjct: 390 YWLQNTE 396


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 YWCQNTE 7
YW QNTE
Sbjct: 390 YWLQNTE 396


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 YWCQNTE 7
YW QNTE
Sbjct: 390 YWLQNTE 396


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YWCQNTETA 9
YWC ETA
Sbjct: 187 YWCPKCETA 195


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YWCQNTETA 9
YWC ETA
Sbjct: 204 YWCPKCETA 212


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YWCQNTETA 9
YWC ETA
Sbjct: 179 YWCPRCETA 187


>sp|HUTI_PYRAR|IMIDAZOLONEPROPIONASE arsenaticum (strain DSM 13514

Query: 2 WCQNTETA 9
WC N +TA
Sbjct: 312 WCLNMQTA 319


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YWCQNTETA 9
YWC ET+
Sbjct: 180 YWCPRCETS 188


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YWCQNTETA 9
YWC ET+
Sbjct: 179 YWCPRCETS 187


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 YWCQNTETA 9
+WC ETA
Sbjct: 182 HWCPRCETA 190


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YWCQNTETA 9
+WC ETA
Sbjct: 182 HWCPRCETA 190


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 214 WCPKCETA 221


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YWCQNTETA 9
+WC ETA
Sbjct: 182 HWCPRCETA 190


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YWCQNTETA 9
YW +NT+ +
Sbjct: 269 YWLENTDDS 277


>sp|Y045_METTH|MEMO1 family protein MTH_45|Methanothermobacter thermautotrophicus

Query: 2 WCQNTETAA 10
W Q ETAA
Sbjct: 159 WMQGHETAA 167


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 176 WCHRCETA 183


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 175 WCPRCETA 182


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 183 WCPRCETA 190


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 181 WCPRCETA 188


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 183 WCPRCETA 190


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 190 WCPRCETA 197


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 WCQNTETA 9
WC + ETA
Sbjct: 201 WCPDCETA 208


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YWCQNT 6
YW +NT
Sbjct: 269 YWLENT 274


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YWCQNT 6
YW +NT
Sbjct: 269 YWLENT 274


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 172 WCPRCETA 179


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 180 WCPRCETA 187


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 181 WCPRCETA 188


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 181 WCPRCETA 188


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 185 WCPRCETA 192


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 181 WCPRCETA 188


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 181 WCPRCETA 188


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 180 WCPRCETA 187


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 176 WCPRCETA 183


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 WCQNTETA 9
WC ETA
Sbjct: 180 WCPRCETA 187




102|Sequence|506|515|TETAAQCNAV

>sp|PELO_IGNH4|PROTEIN pelota homolog|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 TAAQCNAV 10
TAAQ NAV
Sbjct: 277 TAAQANAV 284


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TETAAQCN 8
TETAA C+
Sbjct: 504 TETAAPCS 511


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETAAQCNAV 10
ETA C+AV
Sbjct: 56 ETALDCDAV 64




103|Sequence|511|524|QCNAVEHCKRHVWN

>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 5 VEHCKRHVWN 14
+E C R +WN
Sbjct: 129 IEGCARELWN 138


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 5 VEHCKRHVW 13
++HC+R +W
Sbjct: 231 IDHCQRCLW 239


>sp|RIFK_HALMA|RIBOFLAVIN kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QCNAVEHCKRHV 12
QC+ EH ++ V
Sbjct: 34 QCDVAEHVRQRV 45


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 EHCKRH 11
EHC++H
Sbjct: 16 EHCRKH 21


>sp|THI4_HALVD|THIAMINE thiazole synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 NAVEHCKRH 11
N +EH K H
Sbjct: 199 NGIEHAKEH 207


>sp|PAN_METMA|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QCNAVEHCKRHVWN 14
QC+ +E KR++ N
Sbjct: 44 QCSQIESEKRYLEN 57


>sp|PAN_METAC|PROTEASOME-ACTIVATING nucleotidase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QCNAVEHCKRHVWN 14
QC+ +E KR++ N
Sbjct: 44 QCSQIESEKRYLEN 57


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 AVEHCKRH 11
A+E+C+ H
Sbjct: 376 AIEYCREH 383


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NAVEHCKRHVW 13
N +E +R +W
Sbjct: 280 NRIEELRREIW 290


>sp|Y3508_METJA|PROBABLE helicase MJECL08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NAVEHCKRH 11
NA E C RH
Sbjct: 155 NAKELCSRH 163


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 2 CNAVEHCKRHVWN 14
C ++HC+ + N
Sbjct: 252 CTFIDHCREFLKN 264


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 QCNAVEHCKR 10
+ N V+HC R
Sbjct: 122 KTNNVDHCAR 131


>sp|Y897_ARCFU|UNCHARACTERIZED protein AF_0897|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QCNAVEHCKRHVWN 14
C+ V HCK + N
Sbjct: 42 HCSLVRHCKSLLIN 55


>sp|T2M1_METJA|TYPE II restriction enzyme MjaI|Methanocaldococcus jannaschii (strain

Query: 3 NAVEHCKRHVWN 14
NA++ +WN
Sbjct: 88 NAIDEATEKIWN 99


>sp|Y451_ARCFU|UNCHARACTERIZED protein AF_0451|Archaeoglobus fulgidus (strain ATCC 49558

Query: 7 HCKRH 11
HCK+H
Sbjct: 34 HCKKH 38


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 QCNAVEHCK 9
QC AV H K
Sbjct: 130 QCGAVYHIK 138


>sp|Y1434_METJA|PUTATIVE DNA repair glycosylase MJ1434|Methanocaldococcus jannaschii (strain

Query: 5 VEHCKR 10
VEHCK+
Sbjct: 195 VEHCKK 200


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 7 HCKRHVW 13
HC + VW
Sbjct: 255 HCHQSVW 261


>sp|CAS4_HALVD|CRISPR-ASSOCIATED exonuclease Cas4|Haloferax volcanii (strain ATCC 29605

Query: 8 CKRHVW 13
CKR +W
Sbjct: 36 CKRELW 41


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 EHCKRH 11
E CKRH
Sbjct: 79 EFCKRH 84


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 5 VEHCKRHVW 13
VE RH+W
Sbjct: 394 VERVVRHLW 402


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 QCNAVEHCKR 10
+ N V+HC R
Sbjct: 121 KTNNVDHCAR 130


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 VEHCKRHVWN 14
VEH +WN
Sbjct: 45 VEHNPDEIWN 54


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 8 CKRHVW 13
CK H W
Sbjct: 25 CKSHFW 30


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 AVEHCK 9
AVEHC+
Sbjct: 174 AVEHCE 179


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 AVEHCK 9
AVEHC+
Sbjct: 174 AVEHCE 179


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NAVEHC 8
+AVEHC
Sbjct: 208 SAVEHC 213


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 AVEHCKRHV 12
+E+CKR++
Sbjct: 291 GIEYCKRNL 299


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 7 HCKRHVW 13
HC + +W
Sbjct: 248 HCNQSIW 254


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 82 ECQAMEVCQQNM 93


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 82 ECQAMEVCQQNM 93


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 QCNAVEHCKRHV 12
+C A+E C++++
Sbjct: 130 ECQAMEVCQQNM 141






THE END