S53A1_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|HASLHEAFKM

>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 ASLHEAFKM 10
AS+H AFKM
Sbjct: 1161 ASIHPAFKM 1169


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 ASLHEAFKM 10
AS+H AFKM
Sbjct: 1161 ASIHPAFKM 1169


>sp|RDRP_RDVF|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Fujian)

Query: 1 HASLHEAFK 9
+ASLH++FK
Sbjct: 1131 YASLHQSFK 1139


>sp|RDRP_RDVA|RNA-DIRECTED RNA polymerase P1|Rice dwarf virus (isolate Akita)

Query: 1 HASLHEAFK 9
+ASLH++FK
Sbjct: 1131 YASLHQSFK 1139


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 ASLHEAFKM 10
A++H AFK+
Sbjct: 1161 ANIHPAFKL 1169


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 2 ASLHEAFKM 10
A++H AFK+
Sbjct: 1159 ANIHPAFKL 1167


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 2 ASLHEAFKM 10
A++H AFK+
Sbjct: 1158 ANIHPAFKL 1166


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 1 HASLHEAFK 9
H +LH FK
Sbjct: 570 HGALHATFK 578




2|SequenceR|15|6|WEPTIHASLH

>sp|V018_FOWPN|PUTATIVE ankyrin repeat protein FPV018|Fowlpox virus (strain NVSL) (FPV)

Query: 1 WEPTIHASLH 10
WE T H SL+
Sbjct: 193 WEETKHPSLY 202


>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_VACCW|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Western Reserve)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_RFVKA|MRNA-CAPPING enzyme catalytic subunit|Rabbit fibroma virus (strain Kasza)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 669 WQFAIHYSFH 678


>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 678 WQFAIHYSFH 687


>sp|MCEL_FOWPN|MRNA-CAPPING enzyme catalytic subunit|Fowlpox virus (strain NVSL) (FPV)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 682 WQFAIHYSFH 691


>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_CAMPS|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain CMS)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|MCEL_CAMPM|MRNA-CAPPING enzyme catalytic subunit|Camelpox virus (strain M-96)

Query: 1 WEPTIHASLH 10
W+ IH S H
Sbjct: 677 WQFAIHYSFH 686


>sp|VF717_ASFM2|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 EPTIHASLH 10
E IHA LH
Sbjct: 413 ENVIHADLH 421


>sp|VF717_ASFK5|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 EPTIHASLH 10
E IHA LH
Sbjct: 413 ENVIHADLH 421


>sp|VF717_ASFWA|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 EPTIHASLH 10
E IHA LH
Sbjct: 413 ENVIHADLH 421


>sp|VF717_ASFP4|UNCHARACTERIZED protein C717R|African swine fever virus (isolate

Query: 2 EPTIHASLH 10
E IHA LH
Sbjct: 413 ENVIHADLH 421


>sp|VF717_ASFB7|UNCHARACTERIZED protein C717R|African swine fever virus (strain

Query: 2 EPTIHASLH 10
E IHA LH
Sbjct: 413 ENVIHADLH 421




3|SequenceR|20|11|IYQKRWEPTI

>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 IYQKRWEPTI 10
+YQ+RW+ T+
Sbjct: 687 VYQRRWKKTV 696


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 IYQKRWEPTI 10
+YQ+RW+ T+
Sbjct: 686 VYQRRWKKTV 695


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 1 IYQKRWEPT 9
+YQ++WE T
Sbjct: 520 LYQEKWEAT 528


>sp|YR866_MIMIV|UNCHARACTERIZED protein R866|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IYQKRWEPTI 10
+Y++R++P+I
Sbjct: 306 VYKERYQPSI 315


>sp|VF359_IIV6|UNCHARACTERIZED protein 359L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 YQKRWEPT 9
Y+K W+PT
Sbjct: 117 YEKTWDPT 124


>sp|CVC2_EHV2|CAPSID vertex component 2|Equine herpesvirus 2 (strain 86/87)

Query: 3 QKRWEPTI 10
+KRW P++
Sbjct: 5 RKRWPPSV 12


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 3 QKRWEPTI 10
QK W PT+
Sbjct: 1490 QKHWRPTV 1497


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 3 QKRWEPTI 10
QK W PT+
Sbjct: 1490 QKHWRPTV 1497


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 3 QKRWEPTI 10
QK W PT+
Sbjct: 1490 QKHWRPTV 1497


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 3 QKRWEPTI 10
QK W PT+
Sbjct: 1490 QKHWRPTV 1497


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 2 YQKRWEP 8
Y K WEP
Sbjct: 181 YSKWWEP 187


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 2 YQKRWEP 8
Y K WEP
Sbjct: 178 YSKWWEP 184


>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)

Query: 1 IYQKRWEPTI 10
+ + WEPT+
Sbjct: 849 VVETSWEPTL 858




4|SequenceR|25|16|FAEYQIYQKR

>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2514 SEFQIYKK 2521


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2511 SEFQIYKK 2518


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2514 SEFQIYKK 2521


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2514 SEFQIYKK 2521


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2514 SEFQIYKK 2521


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2514 SEFQIYKK 2521


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2 AEYQIYQK 9
+E+QIY+K
Sbjct: 2514 SEFQIYKK 2521


>sp|POL_FIVPE|POL polyprotein|Feline immunodeficiency virus (isolate Petaluma)

Query: 4 YQIYQK 9
YQ+YQK
Sbjct: 494 YQVYQK 499


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 FAEYQIYQK 9
FAE+ +Y K
Sbjct: 92 FAEWMLYSK 100


>sp|POL_FIVSD|POL polyprotein|Feline immunodeficiency virus (strain San

Query: 4 YQIYQK 9
YQ+YQK
Sbjct: 494 YQVYQK 499


>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)

Query: 4 YQIYQK 9
YQ+YQK
Sbjct: 493 YQVYQK 498




5|SequenceR|30|21|YLMDKFAEYQ

>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 LMDKFAEYQ 10
LMDKFA Q
Sbjct: 1117 LMDKFAALQ 1125


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LMDKFAEYQ 10
LMDKFA Q
Sbjct: 1117 LMDKFAALQ 1125


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 2 LMDKFAEY 9
LMDKF +Y
Sbjct: 2025 LMDKFVDY 2032


>sp|VP5_RRSVT|PUTATIVE minor structural protein VP5|Rice ragged stunt virus (isolate

Query: 3 MDKFAE 8
MDKFAE
Sbjct: 1 MDKFAE 6


>sp|53DR_MIMIV|PUTATIVE 5'(3')-deoxyribonucleotidase R824|Acanthamoeba polyphaga

Query: 2 LMDKFAE 8
+MDKFAE
Sbjct: 28 IMDKFAE 34


>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5

Query: 1 YLMDKFAEYQ 10
Y D+F EYQ
Sbjct: 371 YNADQFREYQ 380


>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47

Query: 1 YLMDKFAEYQ 10
Y D F EYQ
Sbjct: 369 YNADNFREYQ 378




6|SequenceR|35|26|QDQASYLMDK

>sp|VE6_HPV08|PROTEIN E6|Human papillomavirus type 8

Query: 1 QDQASYL 7
QD+ASYL
Sbjct: 4 QDKASYL 10


>sp|GP57_BPT4|TAIL fiber assembly helper protein|Enterobacteria phage T4

Query: 1 QDQASYLMDK 10
QDQA+ LM++
Sbjct: 25 QDQAARLMEE 34


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2485 DQSSYIVD 2492


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2462 DQSSYIVD 2469


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2462 DQSSYIVD 2469


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2485 DQSSYIVD 2492


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2460 DQSSYVVD 2467


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2468 DQSSYVVD 2475


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2460 DQSSYVVD 2467


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 DQASYLMD 9
DQ+SY++D
Sbjct: 2468 DQSSYVVD 2475


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 1 QDQASYLMD 9
+QASYL+D
Sbjct: 406 HNQASYLLD 414


>sp|CHIT_NPVAC|CHITINASE californica nuclear polyhedrosis virus

Query: 3 QASYLMDK 10
QASY+ DK
Sbjct: 489 QASYVFDK 496




7|SequenceR|40|31|EVSPAQDQAS

>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 EVSPAQDQA 9
++PAQD+A
Sbjct: 50 RIAPAQDKA 58




8|SequenceR|45|36|DEDTVEVSPA

>sp|GB_SHV21|ENVELOPE glycoprotein B|Saimiriine herpesvirus 2 (strain 11)

Query: 3 DTVEVSP 9
DTVEVSP
Sbjct: 223 DTVEVSP 229


>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P

Query: 3 DTVEVSP 9
DTVEVSP
Sbjct: 244 DTVEVSP 250


>sp|GB_ILTVS|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain SA-2)

Query: 3 DTVEVSP 9
DTVE+SP
Sbjct: 251 DTVEISP 257


>sp|GB_ILTVT|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain Thorne

Query: 3 DTVEVSP 9
DTVE+SP
Sbjct: 251 DTVEISP 257


>sp|GB_ILTV6|ENVELOPE glycoprotein B|Infectious laryngotracheitis virus (strain 632)

Query: 3 DTVEVSP 9
DTVE+SP
Sbjct: 241 DTVEISP 247


>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)

Query: 1 DEDTVEVSPA 10
DEDT + SPA
Sbjct: 13 DEDTQKSSPA 22


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 DEDTVEVSP 9
D D VE+SP
Sbjct: 658 DRDRVEMSP 666


>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1 DEDTVEVSPA 10
DEDT + SPA
Sbjct: 13 DEDTQKPSPA 22


>sp|DARB_BPP1|DEFENSE against restriction protein B|Escherichia phage P1 (Bacteriophage

Query: 2 EDTVEVSP 9
ED+V++SP
Sbjct: 154 EDSVQISP 161


>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)

Query: 1 DEDTVEVSPA 10
DEDT + SPA
Sbjct: 13 DEDTQKPSPA 22


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 DEDTVEVSP 9
D D +E+SP
Sbjct: 661 DRDRIEMSP 669


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 DEDTVEVSP 9
D D +E+SP
Sbjct: 654 DRDRIEMSP 662


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 DEDTVEVSP 9
D D +E+SP
Sbjct: 660 DRDRIEMSP 668


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 DEDTVEVSP 9
D D +E+SP
Sbjct: 661 DRDRIEMSP 669


>sp|YR472_MIMIV|UNCHARACTERIZED protein R472|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DEDTVEVSP 9
+EDTV ++P
Sbjct: 188 NEDTVNINP 196




9|SequenceR|50|41|YRKVTDEDTV

>sp|VGLN_BEFVB|NON-STRUCTURAL glycoprotein GNS|Bovine ephemeral fever virus (strain

Query: 2 RKVTDEDTV 10
R +TDEDTV
Sbjct: 382 RNLTDEDTV 390


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 YRKVTDEDT 9
YRK TDE T
Sbjct: 1096 YRKETDEVT 1104




10|SequenceR|55|46|EFKAFYRKVT

>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 4 AFYRKVT 10
AFYR+VT
Sbjct: 584 AFYRRVT 590


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 4 AFYRKVT 10
AFYR+VT
Sbjct: 589 AFYRRVT 595


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 4 AFYRKVT 10
AFYR+VT
Sbjct: 589 AFYRRVT 595


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 4 AFYRKVT 10
AFYR+VT
Sbjct: 589 AFYRRVT 595


>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)

Query: 4 AFYRKVT 10
AFYR+VT
Sbjct: 589 AFYRRVT 595


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 4 AFYRKVT 10
AFYR+VT
Sbjct: 589 AFYRRVT 595


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 1 EFKAFYRKVT 10
E +AFY+K T
Sbjct: 2243 ELQAFYQKFT 2252


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 EFKAFYRKVT 10
E +AFY+K T
Sbjct: 2239 ELQAFYQKFT 2248


>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)

Query: 1 EFKAFYRKVT 10
+FK F R+VT
Sbjct: 383 QFKPFQRRVT 392


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 FKAFYRKVT 10
FK+FY VT
Sbjct: 122 FKSFYSPVT 130


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 2 FKAFYRKVT 10
FK+FY VT
Sbjct: 122 FKSFYSPVT 130


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 1 EFKAFYRKVT 10
+F FY KVT
Sbjct: 22 QFVEFYEKVT 31


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 1 EFKAFYRKVT 10
+F FY KVT
Sbjct: 22 QFVEFYEKVT 31


>sp|TRM1_SUHVF|TRIPARTITE terminase subunit 1|Suid herpesvirus 1 (strain Indiana-Funkhauser

Query: 1 EFKAFYR 7
EF+ FYR
Sbjct: 619 EFRGFYR 625


>sp|DPOL_FRG3G|PUTATIVE DNA polymerase 060R|Frog virus 3 (isolate Goorha)

Query: 1 EFKAFY 6
EFKAFY
Sbjct: 977 EFKAFY 982




11|SequenceR|60|51|QFFKEEFKAF

>sp|VG36_ALHV1|PUTATIVE tyrosine kinase 36|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 QFFKEEFKA 9
Q F+EEF A
Sbjct: 388 QLFREEFDA 396


>sp|DPOL_ICHVA|DNA polymerase|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 QFFKEEFKA 9
+FFK EF++
Sbjct: 226 KFFKSEFRS 234


>sp|YR569_MIMIV|UNCHARACTERIZED exonuclease R569|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 QFFKEEFKA 9
Q FKE+F+A
Sbjct: 292 QLFKEKFQA 300




12|SequenceR|65|56|EKECTQFFKE

>sp|US10_EHV4|VIRION protein US10 homolog|Equine herpesvirus 4 (strain 1942)

Query: 1 EKECTQFFK 9
E+EC +FF+
Sbjct: 181 ERECARFFE 189


>sp|VG36_ALHV1|PUTATIVE tyrosine kinase 36|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 KECTQFFKE 10
KEC Q F+E
Sbjct: 384 KECCQLFRE 392


>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)

Query: 1 EKECTQFFKE 10
++ C QFF E
Sbjct: 173 DQSCVQFFAE 182


>sp|CAPSD_BEYDV|CAPSID protein|Bean yellow dwarf virus (BeYDV)

Query: 2 KECTQFFK 9
K C +FFK
Sbjct: 186 KSCNKFFK 193


>sp|NS1_PAVBP|INITIATOR protein NS1|Bovine parvovirus 1 (BPV-1)

Query: 4 CTQFFK 9
CT FFK
Sbjct: 144 CTSFFK 149


>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate

Query: 2 KECTQFFK 9
K CT++FK
Sbjct: 187 KSCTRYFK 194




13|SequenceR|70|61|NIKALEKECT

>sp|019R_FRG3G|PUTATIVE serine/threonine-protein kinase 019R|Frog virus 3 (isolate

Query: 3 KALEKECT 10
+ALE+EC+
Sbjct: 31 RALERECS 38


Query: 3 KALEKEC 9
+ALE+EC
Sbjct: 94 RALEREC 100


>sp|R1A_BRV1|REPLICASE polyprotein 1a|Breda virus 1 (BRV-1)

Query: 1 NIKALEKECT 10
N+K + K CT
Sbjct: 2578 NVKGVVKNCT 2587


>sp|R1AB_BRV1|REPLICASE polyprotein 1ab|Breda virus 1 (BRV-1)

Query: 1 NIKALEKECT 10
N+K + K CT
Sbjct: 2578 NVKGVVKNCT 2587




14|SequenceR|75|66|ESYFTNIKAL

>sp|VF380_IIV6|PROBABLE serine/threonine-protein kinase 380R|Invertebrate iridescent virus

Query: 3 YFTNIKAL 10
YFTN+KA+
Sbjct: 155 YFTNVKAV 162


>sp|YL285_MIMIV|UNCHARACTERIZED protein L285|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 ESYFTNI 7
E YFTNI
Sbjct: 50 EKYFTNI 56


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ESYFTNIKAL 10
E Y TN+K L
Sbjct: 1182 EKYHTNVKEL 1191


>sp|P4A_FOWPN|MAJOR core protein 4a precursor|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ESYFTNIKAL 10
+SYF NIK +
Sbjct: 868 KSYFENIKRI 877


>sp|RP132_FOWPN|DNA-DIRECTED RNA polymerase 132 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 ESYFTNIK 8
E+Y TNIK
Sbjct: 366 ENYITNIK 373


>sp|NTP1_FOWPN|NUCLEOSIDE triphosphatase I|Fowlpox virus (strain NVSL) (FPV)

Query: 3 YFTNIKAL 10
+FTNIK++
Sbjct: 124 FFTNIKSI 131




15|SequenceR|80|71|AEALKESYFT

>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1733 AAALKRSYFT 1742


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1736 AAALKRSYFT 1745


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1736 AAALKRSYFT 1745


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1733 AAALKRSYFT 1742


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1734 AAALKRSYFT 1743


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1733 AAALKRSYFT 1742


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1734 AAALKRSYFT 1743


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1 AEALKESYFT 10
A ALK SYFT
Sbjct: 1741 AAALKRSYFT 1750


>sp|VG71_SHV21|UNCHARACTERIZED gene 71 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 2 EALKESYFT 10
EA+K+S+FT
Sbjct: 79 EAVKQSFFT 87


>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 3 ALKESYFT 10
ALK SYFT
Sbjct: 1697 ALKRSYFT 1704


>sp|GAG_SIVMS|GAG polyprotein|Simian immunodeficiency virus (isolate STM)

Query: 1 AEALKESY 8
AEALKE++
Sbjct: 366 AEALKEAF 373




16|SequenceR|85|76|AFRRQAEALK

***** No hits found ******


17|SequenceR|90|81|ENQLTAFRRQ

>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 1 ENQLTAFRR 9
ENQLTA R
Sbjct: 427 ENQLTAMLR 435




18|SequenceR|95|86|LSSQLENQLT

>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 4 QLENQLT 10
QLENQLT
Sbjct: 425 QLENQLT 431




19|SequenceR|100|91|EKQADLSSQL

***** No hits found ******


20|SequenceR|105|96|TVGTSEKQAD

>sp|L_TSWV1|RNA-DIRECTED RNA polymerase L|Tomato spotted wilt virus (strain

Query: 4 TSEKQAD 10
TSE+QAD
Sbjct: 630 TSERQAD 636




21|SequenceR|110|101|RQRLTTVGTS

***** No hits found ******


22|SequenceR|115|106|FVPKRRQRLT

>sp|GP_HAZVJ|ENVELOPMENT polyprotein|Hazara virus (isolate JC280)

Query: 3 PKRRQRL 9
PKR+QRL
Sbjct: 570 PKRKQRL 576


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 FVPKRRQRLT 10
+VP+ +QRLT
Sbjct: 244 YVPQPKQRLT 253


>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61

Query: 1 FVPKRRQRL 9
F PKRR+R+
Sbjct: 439 FFPKRRKRV 447


>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18

Query: 1 FVPKRRQRL 9
F+PK+R+R+
Sbjct: 443 FIPKKRKRV 451


>sp|UL24_EHV1|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain HVS25A)

Query: 4 KRRQRLT 10
KRRQRLT
Sbjct: 2 KRRQRLT 8


>sp|UL24_EHV1V|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain V592)

Query: 4 KRRQRLT 10
KRRQRLT
Sbjct: 2 KRRQRLT 8


>sp|UL24_EHV1B|PROTEIN UL24 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 4 KRRQRLT 10
KRRQRLT
Sbjct: 2 KRRQRLT 8


>sp|CAPSD_CRSVL|CAPSID protein|Carnation ringspot virus (isolate Lommel)

Query: 1 FVPKRRQRL 9
VPK+RQ L
Sbjct: 13 LVPKQRQNL 21


>sp|VF268_IIV3|UNCHARACTERIZED protein 074L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 FVPKRRQRL 9
F P+ RQR+
Sbjct: 276 FTPQERQRI 284


>sp|AN_ALHV1|SHUTOFF alkaline exonuclease|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 PKRRQRLT 10
PKR+++LT
Sbjct: 311 PKRKRKLT 318




23|SequenceR|120|111|EHSLHFVPKR

>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)

Query: 4 LHFVPK 9
LHF+PK
Sbjct: 111 LHFIPK 116


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 2 HSLHFVPKR 10
H L+F+P+R
Sbjct: 1138 HELNFLPER 1146


>sp|POLN_TYMVA|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 2 HSLHFVPK 9
H+LH+VP+
Sbjct: 195 HTLHYVPE 202


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 2 HSLHFVP 8
H+LHF P
Sbjct: 337 HNLHFYP 343


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 2 HSLHFVPK 9
H+LH+VP+
Sbjct: 195 HTLHYVPE 202


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 2 HSLHFVPK 9
H+LH+VP+
Sbjct: 195 HTLHYVPE 202


>sp|GLYC_WWAVU|PRE-GLYCOPROTEIN polyprotein GP complex|Whitewater Arroyo mammarenavirus (isolate

Query: 1 EHSLHFVPK 9
EH HF P+
Sbjct: 152 EHDHHFTPQ 160


>sp|RPOA_PRRSS|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 EHSLHFVP 8
+H+ HF P
Sbjct: 3812 DHTYHFAP 3819


>sp|E3145_ADEB3|EARLY E3 14.5 kDa protein|Bovine adenovirus B serotype 3

Query: 1 EHSLHF 6
EHSLHF
Sbjct: 61 EHSLHF 66


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 EHSLHFVP 8
+H+ HF P
Sbjct: 3829 DHTYHFAP 3836


>sp|POLG_BYMV|GENOME polyprotein|Bean yellow mosaic virus

Query: 1 EHSLHFVPK 9
+H++H+V K
Sbjct: 142 QHTIHYVAK 150


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 4 LHFVPKR 10
LH VPKR
Sbjct: 418 LHSVPKR 424


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 3 SLHFVPK 9
S+HF PK
Sbjct: 355 SVHFTPK 361


>sp|MVP_BYMV|P3N-PIPO polyprotein|Bean yellow mosaic virus

Query: 1 EHSLHFVPK 9
+H++H+V K
Sbjct: 142 QHTIHYVAK 150


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 4 LHFVPKR 10
LH VPKR
Sbjct: 420 LHSVPKR 426




24|SequenceR|125|116|HQVREEHSLH

>sp|VF312_ASFM2|UNCHARACTERIZED protein CP312R|African swine fever virus (isolate

Query: 1 HQVREEHSLH 10
H++ E HS+H
Sbjct: 246 HKLIESHSIH 255


>sp|VF312_ASFWA|UNCHARACTERIZED protein CP312R|African swine fever virus (isolate

Query: 1 HQVREEHSLH 10
H++ E HS+H
Sbjct: 246 HKLIESHSIH 255


>sp|VF312_ASFB7|UNCHARACTERIZED protein CP312R|African swine fever virus (strain

Query: 1 HQVREEHSLH 10
H++ E HS+H
Sbjct: 246 HKLIESHSMH 255


>sp|VF312_ASFP4|UNCHARACTERIZED protein CP312R|African swine fever virus (isolate

Query: 1 HQVREEHSLH 10
H++ E HS+H
Sbjct: 246 HKLIESHSIH 255


>sp|POLN_SAV2|POLYPROTEIN P1234|Alphavirus salmon subtype 2 (SAV2)

Query: 1 HQVREEHSL 9
H +RE+H+L
Sbjct: 2070 HYLREQHAL 2078


>sp|POLN_SAV1|POLYPROTEIN P1234|Alphavirus salmon subtype 1 (SAV1)

Query: 1 HQVREEHSL 9
H +RE+H+L
Sbjct: 2078 HYLREQHAL 2086


>sp|VF312_ASFK5|UNCHARACTERIZED protein CP312R|African swine fever virus (isolate

Query: 1 HQVREEHSLH 10
H++ E HS+H
Sbjct: 240 HKLIESHSIH 249




25|SequenceR|130|121|DKINRHQVRE

>sp|EXO2_BPR69|EXONUCLEASE subunit 2|Escherichia phage RB69 (Bacteriophage RB69)

Query: 1 DKINRHQVRE 10
DKIN+ QVRE
Sbjct: 171 DKINKSQVRE 180


>sp|P1_BPPH6|MAJOR inner protein P1|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 3 INRHQVR 9
INRH++R
Sbjct: 718 INRHRIR 724


>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus

Query: 1 DKINRHQ 7
DK++RHQ
Sbjct: 52 DKVSRHQ 58


>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus

Query: 1 DKINRHQ 7
DK++RHQ
Sbjct: 52 DKVSRHQ 58


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 DKINRHQV 8
DK+ +HQ+
Sbjct: 1628 DKVQKHQI 1635


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 DKINRHQVRE 10
DK+ H V+E
Sbjct: 2782 DKVKEHDVQE 2791




26|SequenceR|135|126|FALKLDKINR

***** No hits found ******


27|SequenceR|140|131|LYFESFALKL

>sp|CAPSD_BPCA1|MAJOR capsid protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 LYFESFALKL 10
+Y+ +F+LKL
Sbjct: 302 MYYNTFSLKL 311


>sp|L_MOBVC|RNA-DIRECTED RNA polymerase L|Mobala mammarenavirus (isolate Rat/Central African

Query: 1 LYFESFA 7
+YFESFA
Sbjct: 1846 IYFESFA 1852


>sp|MCEL_FOWPN|MRNA-CAPPING enzyme catalytic subunit|Fowlpox virus (strain NVSL) (FPV)

Query: 1 LYFESFAL 8
LYFE F+L
Sbjct: 672 LYFEKFSL 679




28|SequenceR|145|136|LLILSLYFES

>sp|Y653_ATV|STRUCTURAL protein ORF653|Acidianus two-tailed virus (ATV)

Query: 1 LLILSLYFE 9
L +L LYFE
Sbjct: 111 LAVLKLYFE 119




29|SequenceR|150|141|NQYNQLLILS

>sp|SCAF_BPHC1|CAPSID assembly scaffolding protein|Haemophilus phage HP1 (strain HP1c1)

Query: 2 QYNQLLI 8
Q+NQLLI
Sbjct: 247 QFNQLLI 253


>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 YNQLLILS 10
YN+LLIL+
Sbjct: 23 YNKLLILT 30


>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 NQYNQLLILS 10
+ YN+LLIL+
Sbjct: 21 HMYNKLLILA 30




30|SequenceR|155|146|GTFNLNQYNQ

>sp|POL1_BAYMJ|GENOME polyprotein 1|Barley yellow mosaic virus (strain

Query: 1 GTFNLNQY 8
GTFN+N Y
Sbjct: 1386 GTFNMNCY 1393


>sp|POL1_BAYMG|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 GTFNLNQY 8
GTFN+N Y
Sbjct: 1386 GTFNMNCY 1393


>sp|POL1_BAYMY|GENOME polyprotein 1|Barley yellow mosaic virus (isolate

Query: 1 GTFNLNQY 8
GTFN+N Y
Sbjct: 1386 GTFNMNCY 1393


>sp|NSP1_ROTRH|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Monkey/United

Query: 2 TFNLNQYN 9
TF LNQ+N
Sbjct: 434 TFTLNQFN 441


>sp|NSP1_ROTTU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Monkey/United

Query: 2 TFNLNQYN 9
TF LNQ+N
Sbjct: 432 TFTLNQFN 439


>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate

Query: 3 FNLNQYNQ 10
FN + YNQ
Sbjct: 576 FNFSNYNQ 583


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 GTFNLNQY 8
GTF +N+Y
Sbjct: 2066 GTFPINEY 2073


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GTFNLNQY 8
GTF +N+Y
Sbjct: 2064 GTFPINEY 2071


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GTFNLNQY 8
GTF +N+Y
Sbjct: 2064 GTFPINEY 2071


>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)

Query: 2 TFNLNQYN 9
T NLNQ N
Sbjct: 801 TLNLNQIN 808


>sp|YL888_MIMIV|UNCHARACTERIZED protein L888|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GTFNLNQYN 9
G +N+N YN
Sbjct: 226 GIYNINHYN 234


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1 GTFNLNQYN 9
G+FNL+ Y+
Sbjct: 451 GSFNLSSYD 459




31|SequenceR|160|151|LIKRFGTFNL

>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 1 LIKRFGTFNL 10
+I RFGT+NL
Sbjct: 2097 MIARFGTYNL 2106


>sp|POLS_CRPVC|STRUCTURAL polyprotein|Cricket paralysis virus (isolate

Query: 1 LIKRFGTF 8
LIKRFG F
Sbjct: 683 LIKRFGIF 690


>sp|RIR1_SHV21|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Saimiriine herpesvirus 2 (strain 11)

Query: 2 IKRFGTFN 9
IK+FG FN
Sbjct: 563 IKKFGVFN 570


>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)

Query: 3 KRFGTFNL 10
KRF TFN+
Sbjct: 556 KRFATFNV 563


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 LIKRFGTFN 9
L K+F TFN
Sbjct: 259 LAKKFDTFN 267


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 LIKRFGTFN 9
L K+F TFN
Sbjct: 259 LAKKFDTFN 267


>sp|GP_SBVBH|ENVELOPMENT polyprotein|Bovine Schmallenberg virus (isolate

Query: 2 IKRFGTFNL 10
+KRFG+ N+
Sbjct: 811 VKRFGSCNV 819


>sp|SPHR_AMEPV|SPHEROIDIN moorei entomopoxvirus (AmEPV)

Query: 1 LIKRFGTFNL 10
L+KR+G F +
Sbjct: 238 LLKRYGEFEV 247


>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 KRFGTFN 9
K FGTFN
Sbjct: 814 KYFGTFN 820




32|SequenceR|165|156|KDHKKLIKRF

>sp|Y103_OSHVF|PUTATIVE transmembrane protein ORF103|Ostreid herpesvirus 1 (isolate France)

Query: 1 KDHKKLIKRF 10
K+H+K++KR+
Sbjct: 115 KEHRKMVKRW 124


>sp|POL_SIVTN|GAG-POL polyprotein|Simian immunodeficiency virus (isolate TAN1)

Query: 1 KDHKKLIKRF 10
++H+KLIK+
Sbjct: 810 EEHRKLIKKL 819


>sp|YR363_MIMIV|UNCHARACTERIZED glycosyltransferase R363|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DHKKLIKRF 10
DHKKL+ F
Sbjct: 59 DHKKLLDEF 67


>sp|SUI1_MIMIV|PROTEIN translation factor SUI1 homolog|Acanthamoeba polyphaga mimivirus

Query: 2 DHKKLIKRF 10
DH++L+K F
Sbjct: 81 DHRELVKNF 89


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 2 DHKKLIKRF 10
DH +IKR+
Sbjct: 26 DHMAIIKRY 34


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 2 DHKKLIKRF 10
DH +IK+F
Sbjct: 26 DHMAIIKKF 34




33|SequenceR|170|161|STELIKDHKK

***** No hits found ******


34|SequenceR|175|166|WDAGRSTELI

>sp|KITH_RFVKA|THYMIDINE kinase|Rabbit fibroma virus (strain Kasza)

Query: 3 AGRSTELI 10
AG+STELI
Sbjct: 17 AGKSTELI 24


>sp|KITH_MYXVU|THYMIDINE kinase|Myxoma virus (strain Uriarra) (MYXV)

Query: 3 AGRSTELI 10
AG+STELI
Sbjct: 17 AGKSTELI 24


>sp|KITH_MYXVL|THYMIDINE kinase|Myxoma virus (strain Lausanne) (MYXV)

Query: 3 AGRSTELI 10
AG+STELI
Sbjct: 17 AGKSTELI 24


>sp|KITH_YMTV5|THYMIDINE kinase|Yaba monkey tumor virus (strain

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 17 SGKSTELI 24


>sp|KITH_VARV|THYMIDINE kinase|Variola virus

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_VACCW|THYMIDINE kinase|Vaccinia virus (strain Western Reserve)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_VACCT|THYMIDINE kinase|Vaccinia virus (strain Tian Tan)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_VACCC|THYMIDINE kinase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_SWPVK|THYMIDINE kinase|Swinepox virus (strain Kasza) (SWPV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_SHEVK|THYMIDINE kinase|Sheeppox virus (strain KS-1) (SPPV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_RACVI|THYMIDINE kinase|Raccoon poxvirus (RCN)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_MONPZ|THYMIDINE kinase|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|KITH_MONPV|THYMIDINE kinase|Monkeypox virus (MPXV)

Query: 3 AGRSTELI 10
+G+STELI
Sbjct: 15 SGKSTELI 22


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 1 WDAGRSTELI 10
WD+ + ELI
Sbjct: 922 WDSNNAIELI 931




35|SequenceR|180|171|VHAVRWDAGR

>sp|PYHD_NPVOP|POLYHEDRIN pseudotsugata multicapsid polyhedrosis virus

Query: 2 HAVRWD 7
HA+RWD
Sbjct: 139 HALRWD 144


>sp|PYHD_NPVHC|POLYHEDRIN cunea nuclear polyhedrosis virus

Query: 2 HAVRWD 7
HA+RWD
Sbjct: 139 HALRWD 144


>sp|PYHD_NPVBM|POLYHEDRIN mori nuclear polyhedrosis virus

Query: 2 HAVRWD 7
HA+RWD
Sbjct: 139 HALRWD 144


>sp|PYHD_NPVAG|POLYHEDRIN gemmatalis nuclear polyhedrosis virus

Query: 2 HAVRWD 7
HA+RWD
Sbjct: 139 HALRWD 144


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 VHAVRWD 7
+HA RWD
Sbjct: 1155 IHAPRWD 1161


>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 VRWDAGR 10
V WDAGR
Sbjct: 395 VNWDAGR 401


>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus

Query: 4 VRWDAGR 10
V WDAGR
Sbjct: 395 VNWDAGR 401


>sp|008L_IIV3|UNCHARACTERIZED protein 008L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 HAVRWDAGR 10
+V WD+GR
Sbjct: 207 QSVMWDSGR 215


>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare

Query: 2 HAVRWDAG 9
+ VRWD+G
Sbjct: 131 NGVRWDSG 138


>sp|YL062_MIMIV|PUTATIVE ankyrin repeat protein L62|Acanthamoeba polyphaga mimivirus

Query: 2 HAVRWDAG 9
HA+RW G
Sbjct: 78 HAIRWACG 85


>sp|5057R_ASFM2|PROTEIN MGF 505-7R|African swine fever virus (isolate

Query: 1 VHAVRWDAGR 10
VH +++++GR
Sbjct: 415 VHTIKYESGR 424


>sp|5056R_ASFWA|PROTEIN MGF 505-6R|African swine fever virus (isolate

Query: 1 VHAVRWDAGR 10
VH +++++GR
Sbjct: 415 VHTIKYESGR 424


>sp|5056R_ASFP4|PROTEIN MGF 505-6R|African swine fever virus (isolate

Query: 1 VHAVRWDAGR 10
VH +++++GR
Sbjct: 415 VHTIKYESGR 424


>sp|US03_GAHVM|PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 VHAVRWDA 8
VHA RW +
Sbjct: 160 VHAYRWKS 167


>sp|US03_GAHVG|SERINE/THREONINE-PROTEIN kinase US3 homolog|Gallid herpesvirus 2 (strain GA)

Query: 1 VHAVRWDA 8
VHA RW +
Sbjct: 160 VHAYRWKS 167


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 2 HAVRWDAG 9
H V WD G
Sbjct: 116 HTVVWDVG 123


>sp|MCP_CEV01|MAJOR capsid protein|Chrysochromulina ericina virus (CeV01)

Query: 1 VHAVRW 6
VHA RW
Sbjct: 375 VHAFRW 380


>sp|YR873_MIMIV|PUTATIVE ankyrin repeat protein R873|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HAVRWDAG 9
HA++W +G
Sbjct: 231 HAIKWASG 238




36|SequenceR|185|176|FPAVEVHAVR

>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)

Query: 1 FPAVEVHAVR 10
FP V HAVR
Sbjct: 475 FPNVVPHAVR 484




37|SequenceR|190|181|KKCTYFPAVE

>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 1 KKCTYFP 7
KKC Y+P
Sbjct: 456 KKCLYYP 462


>sp|Y077_OSHVF|UNCHARACTERIZED protein ORF77|Ostreid herpesvirus 1 (isolate France)

Query: 3 CTYFPAVE 10
CT FP VE
Sbjct: 1078 CTSFPEVE 1085


>sp|443R_IIV6|UNCHARACTERIZED protein 443R|Invertebrate iridescent virus 6 (IIV-6)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 2400 CTYVPA 2405


>sp|MCP_LCDV1|MAJOR capsid protein|Lymphocystis disease virus 1 (isolate

Query: 1 KKCTYF 6
KKCT+F
Sbjct: 41 KKCTWF 46


>sp|P7_PBCV1|MINOR capsid protein P7|Paramecium bursaria Chlorella virus 1

Query: 1 KKCTYFP 7
K+C Y+P
Sbjct: 250 KQCKYYP 256


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 KKCTYFP 7
K+C Y+P
Sbjct: 456 KRCLYYP 462


>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)

Query: 2 KCTYFPAVE 10
KCTY A E
Sbjct: 224 KCTYIKASE 232


>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 KCTYFPAVE 10
KCTY A E
Sbjct: 224 KCTYIKASE 232


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 329 CTYVPA 334


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 330 CTYVPA 335


>sp|YL783_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 2 KCTYF 6
KCTYF
Sbjct: 70 KCTYF 74


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 330 CTYVPA 335


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 332 CTYIPA 337


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3 CTYFPA 8
CTY PA
Sbjct: 332 CTYIPA 337


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 331 CTYVPA 336


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 331 CTYVPA 336


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 331 CTYVPA 336


>sp|VME1_BRV1|MEMBRANE protein|Breda virus 1 (BRV-1)

Query: 3 CTYFPAV 9
CT FPA+
Sbjct: 52 CTMFPAL 58


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3 CTYFPA 8
CTY PA
Sbjct: 331 CTYVPA 336


>sp|POLN_EEVV|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (VEEV)

Query: 3 CTYFPA 8
CTY PA
Sbjct: 331 CTYVPA 336




38|SequenceR|195|186|ILQNIKKCTY

>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 4 NIKKCTY 10
NI+KC Y
Sbjct: 178 NIRKCAY 184


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 4 NIKKCTY 10
NI+KC Y
Sbjct: 174 NIRKCAY 180


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 ILQNIKKCTY 10
+LQ +K C Y
Sbjct: 1681 VLQGLKACCY 1690


>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)

Query: 1 ILQNIKKCT 9
+L+N+K+CT
Sbjct: 396 LLKNMKQCT 404


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 ILQNIKKCTY 10
+LQ +K C Y
Sbjct: 1681 VLQGLKACCY 1690


>sp|PG042_VACCW|VIRION nicking-joining enzyme|Vaccinia virus (strain Western Reserve)

Query: 1 ILQNIKKCT 9
+L+N+K+CT
Sbjct: 396 LLKNMKQCT 404


>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ILQNIKKCT 9
+L+N+K+CT
Sbjct: 396 LLKNMKQCT 404


>sp|Y033_NPVAC|UNCHARACTERIZED 20.8 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 2 LQNIKKCT 9
L+NIKK T
Sbjct: 90 LENIKKAT 97


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus (isolate

Query: 1 ILQNIKK 7
+LQNIKK
Sbjct: 1067 VLQNIKK 1073


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus (isolate

Query: 1 ILQNIKK 7
+LQNIKK
Sbjct: 1067 VLQNIKK 1073


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus (strain

Query: 1 ILQNIKK 7
+LQNIKK
Sbjct: 1067 VLQNIKK 1073


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus (isolate

Query: 1 ILQNIKK 7
+LQNIKK
Sbjct: 1067 VLQNIKK 1073




39|SequenceR|200|191|AETESILQNI

>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1 AETESILQNI 10
AETE+ L+N+
Sbjct: 8 AETEAFLKNV 17


>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)

Query: 1 AETESILQNI 10
AETE+ L+N+
Sbjct: 8 AETEAFLKNV 17


>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann

Query: 1 AETESILQNI 10
AETE+ L+N+
Sbjct: 8 AETEAFLKNV 17


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1 AETESILQNI 10
AETE+ L+N+
Sbjct: 8 AETEAFLKNV 17


>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)

Query: 1 AETESILQNI 10
AETE+ L+N+
Sbjct: 8 AETEAFLKNV 17


>sp|YR731_MIMIV|PUTATIVE BTB/POZ domain and WD-repeat|Acanthamoeba polyphaga mimivirus

Query: 2 ETESILQNI 10
ETE I+QNI
Sbjct: 468 ETEQIIQNI 476




40|SequenceR|205|196|ENTVVAETES

>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 1 ENTVVAETE 9
+NTV+A TE
Sbjct: 1561 KNTVIARTE 1569




41|SequenceR|210|201|DGDELENTVV

>sp|P3_PCVC|UNCHARACTERIZED protein p3|Penicillium chrysogenum virus (isolate Caston/2003)

Query: 1 DGDELENTV 9
DGDE EN +
Sbjct: 147 DGDEYENAM 155


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 1 DGDELENTV 9
DGDE+E+ V
Sbjct: 427 DGDEIEDFV 435


>sp|GLYCO_WCBV|GLYCOPROTEIN Caucasian bat virus (WCBV)

Query: 3 DELENTVV 10
DELEN +V
Sbjct: 285 DELENAIV 292


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 1 DGDELENTV 9
DGDE+E+ V
Sbjct: 427 DGDEVEDFV 435


>sp|YR139_MIMIV|UNCHARACTERIZED glycosyltransferase R139|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 GDELENT 8
GDE ENT
Sbjct: 50 GDEYENT 56


>sp|Y108_NPVOP|UNCHARACTERIZED 11.7 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 DGDELENTV 9
DGD+LE V
Sbjct: 32 DGDQLEQFV 40


>sp|DATPH_BPPMB|DATP triphosphohydrolase|Salmonella phage PMBT28

Query: 3 DELENT 8
DELENT
Sbjct: 96 DELENT 101




42|SequenceR|215|206|MAKQRDGDEL

>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)

Query: 1 MAKQRDGDEL 10
M KQR G E+
Sbjct: 89 MIKQRSGSEI 98


>sp|RDRP_TOMS1|REPLICASE large subunit|Tomato mosaic virus (strain S-1)

Query: 4 QRDGDEL 10
QRDGD L
Sbjct: 252 QRDGDRL 258


>sp|RDRP_TOML|REPLICASE large subunit|Tomato mosaic virus (strain L)

Query: 4 QRDGDEL 10
QRDGD L
Sbjct: 252 QRDGDRL 258


>sp|RDRP_TOMK2|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 4 QRDGDEL 10
QRDGD L
Sbjct: 252 QRDGDRL 258


>sp|RDRP_TOMK1|REPLICASE large subunit|Tomato mosaic virus (strain Kazakh

Query: 4 QRDGDEL 10
QRDGD L
Sbjct: 252 QRDGDRL 258




43|SequenceR|220|211|VRLRKMAKQR

***** No hits found ******


44|SequenceR|225|216|AGLPPVRLRK

>sp|VP8_RRSVT|STRUCTURAL protein precursor VP8|Rice ragged stunt virus (isolate

Query: 1 AGLPPVRLRK 10
+GLPP + RK
Sbjct: 472 SGLPPYQCRK 481


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GLPPVRLRK 10
G PP R+RK
Sbjct: 567 GAPPCRIRK 575


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GLPPVRLRK 10
G PP R+RK
Sbjct: 567 GAPPCRIRK 575


>sp|VDEL_BPP4|TRANSACTIVATION protein|Enterobacteria phage P4 (Bacteriophage P4)

Query: 3 LPPVRLR 9
LPPVRL+
Sbjct: 151 LPPVRLK 157


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 GLPPVRLRK 10
G PP R+RK
Sbjct: 567 GAPPCRIRK 575


>sp|RDRP_REOVJ|RNA-DIRECTED RNA polymerase lambda-3|Reovirus type 2 (strain D5/Jones)

Query: 2 GLPPVRL 8
GLPPV+L
Sbjct: 874 GLPPVKL 880


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 2 GLPPVRLRK 10
G PP R+R+
Sbjct: 567 GAPPCRIRR 575


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 1 AGLPPVRLRK 10
A +PP RL+K
Sbjct: 1764 APIPPPRLKK 1773


>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P

Query: 1 AGLPPVRLRK 10
AGLPP R+
Sbjct: 344 AGLPPASRRR 353


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 1 AGLPPVRLRK 10
A +PP RL+K
Sbjct: 1767 APIPPPRLKK 1776




45|SequenceR|230|221|PAPQAAGLPP

>sp|DPOL_RSIV|DNA polymerase|Red sea bream iridovirus (RSIV)

Query: 1 PAPQAAGLPP 10
PAP G+PP
Sbjct: 155 PAPDIEGVPP 164


>sp|L_SENDZ|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Z) (SeV)

Query: 2 APQAAGLPP 10
+PQ A +PP
Sbjct: 1376 SPQEANIPP 1384


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 2 APQAAGLPP 10
+PQ A +PP
Sbjct: 1376 SPQEANIPP 1384


>sp|L_SENDF|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Fushimi) (SeV)

Query: 2 APQAAGLPP 10
+PQ A +PP
Sbjct: 1376 SPQEANIPP 1384


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 2 APQAAGLPP 10
+PQ A +PP
Sbjct: 1376 SPQEANIPP 1384


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 APQAAGLPP 10
+PQ A +PP
Sbjct: 1376 SPQEANIPP 1384


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 1 PAPQAAGLP 9
PAP AAG P
Sbjct: 346 PAPGAAGPP 354


>sp|YL690_MIMIV|UNCHARACTERIZED protein L690|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PAPQAAGLPP 10
PAP G PP
Sbjct: 288 PAPAECGFPP 297


>sp|CAPSD_TASV1|CAPSID polyprotein VP90|Turkey astrovirus 1 (TAstV-1)

Query: 1 PAPQAAGLP 9
P PQAAG+P
Sbjct: 411 PLPQAAGVP 419


>sp|RIR1_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 1 PAPQAAGLP 9
P P AG+P
Sbjct: 467 PPPHTAGVP 475


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 1 PAPQAAGLPP 10
PAPQ PP
Sbjct: 179 PAPQQGDCPP 188


>sp|HBEAG_DHBV1|EXTERNAL core antigen|Duck hepatitis B virus (strain

Query: 1 PAPQAAGLP 9
P PQ AG P
Sbjct: 281 PTPQRAGSP 289


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1253 PAPVAAVLPP 1262


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1253 PAPVAAVLPP 1262


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1253 PAPVAAVLPP 1262


>sp|YR648_MIMIV|UNCHARACTERIZED protein R648|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PAPQAAGLPP 10
PAP G PP
Sbjct: 314 PAPVECGFPP 323


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1268 PAPVAAVLPP 1277


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1268 PAPVAAVLPP 1277


Query: 1 PAPQAAGLP 9
PAP+ AGLP
Sbjct: 759 PAPEPAGLP 767


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 1 PAPQAAGL 8
P P AAGL
Sbjct: 1680 PCPSAAGL 1687


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1251 PAPVAAVLPP 1260


>sp|122R_IIV3|UNCHARACTERIZED protein 122R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 APQAAGLPP 10
APQ G+PP
Sbjct: 44 APQVLGVPP 52


>sp|CAPSD_DHBV1|CAPSID protein|Duck hepatitis B virus (strain

Query: 1 PAPQAAGLP 9
P PQ AG P
Sbjct: 238 PTPQRAGSP 246


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1 PAPQAAGLPP 10
PAP AA LPP
Sbjct: 1267 PAPIAAVLPP 1276




46|SequenceR|235|226|FTTWAPAPQA

>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 TWAPAP 8
+WAPAP
Sbjct: 2709 SWAPAP 2714


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 TWAPAP 8
+WAPAP
Sbjct: 2709 SWAPAP 2714


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 2 TTWAPAP 8
T WAP P
Sbjct: 223 TLWAPVP 229


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 4 WAPAP 8
WAPAP
Sbjct: 2800 WAPAP 2804


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 4 WAPAP 8
WAPAP
Sbjct: 2710 WAPAP 2714


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 4 WAPAP 8
WAPAP
Sbjct: 2719 WAPAP 2723


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 FTTWAP 6
FTTW P
Sbjct: 2374 FTTWLP 2379


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 FTTWAP 6
FTTW P
Sbjct: 2394 FTTWLP 2399


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 FTTWAP 6
FTTW P
Sbjct: 2424 FTTWLP 2429


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 FTTWAP 6
FTTW P
Sbjct: 2374 FTTWLP 2379


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 FTTWAP 6
FTTW P
Sbjct: 2394 FTTWLP 2399


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 FTTWAP 6
FTTW P
Sbjct: 2424 FTTWLP 2429


>sp|NSP1_ROTME|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 2 TTWAPAP 8
++W PAP
Sbjct: 28 SSWTPAP 34


>sp|L_SENDE|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Enders) (SeV)

Query: 1 FTTWAPAP 8
F WAP P
Sbjct: 991 FLDWAPDP 998


>sp|NCAP_RYSV|NUCLEOPROTEIN yellow stunt virus (RYSV)

Query: 3 TWAPAP 8
TWAPAP
Sbjct: 116 TWAPAP 121


>sp|FPG_MIMIV|PROBABLE formamidopyrimidine-DNA glycosylase|Acanthamoeba polyphaga

Query: 2 TTWAPAPQ 9
T WAPA Q
Sbjct: 279 TYWAPAIQ 286


>sp|CVC2_ALHV1|CAPSID vertex component 2|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 WAPAPQ 9
WAP+PQ
Sbjct: 24 WAPSPQ 29


>sp|TERM_ADES1|PRETERMINAL protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 FTTWAPAP 8
+ TW+P P
Sbjct: 224 YITWSPCP 231


>sp|SEA_AVIET|TYROSINE-PROTEIN kinase transforming protein SEA|Avian erythroblastosis virus

Query: 1 FTTWAPAPQ 9
+ WAP P+
Sbjct: 299 LSCWAPTPE 307


>sp|CAPSD_SPV4|CAPSID protein VP1|Spiroplasma virus 4 (SpV4)

Query: 1 FTTWAPAPQ 9
FT+ PAPQ
Sbjct: 207 FTSCLPAPQ 215




47|SequenceR|240|231|FLGVRFTTWA

>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 3 GVRFTTWA 10
GVR+T W+
Sbjct: 1795 GVRWTMWS 1802


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 5 RFTTWA 10
+FTTWA
Sbjct: 686 QFTTWA 691


>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)

Query: 4 VRFTTWA 10
+RFT WA
Sbjct: 392 LRFTRWA 398


>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)

Query: 4 VRFTTWA 10
+RFT WA
Sbjct: 392 LRFTRWA 398


>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann

Query: 4 VRFTTWA 10
+RFT WA
Sbjct: 392 LRFTRWA 398


>sp|CAPSD_PICV|PROBABLE capsid protein|Pigeon circovirus (PiCV) (Columbid circovirus)

Query: 2 LGVRFTTW 9
LGV TTW
Sbjct: 101 LGVDITTW 108




48|SequenceR|245|236|IFIGCFLGVR

>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 2 FIGCFLG 8
FIGC++G
Sbjct: 314 FIGCYMG 320


>sp|RDRP_PCV87|REPLICASE large subunit|Peanut clump virus (isolate 87/TGTA2)

Query: 2 FIGCFL 7
FIGCFL
Sbjct: 250 FIGCFL 255


>sp|YR614_MIMIV|PUTATIVE band 7 family protein|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 IGCFLG 8
IGCFLG
Sbjct: 48 IGCFLG 53


>sp|NCAP_WCBV|NUCLEOPROTEIN Caucasian bat virus (WCBV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_MOKV|NUCLEOPROTEIN virus (MOKV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_KHUV|NUCLEOPROTEIN virus (KHUV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_IRKV|NUCLEOPROTEIN virus (IRKV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_EBLV1|NUCLEOPROTEIN bat lyssavirus 1 (strain

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_ARAV|NUCLEOPROTEIN virus (ARAV)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2 FIGCFLG 8
F+GC++G
Sbjct: 314 FVGCYMG 320


>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 IFIGCFLGV 9
+F+GC L V
Sbjct: 215 VFVGCILAV 223


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 IFIGCFLGV 9
+F+GC L V
Sbjct: 215 VFVGCILAV 223


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 2 FIGCFLGVR 10
F CFLG+R
Sbjct: 499 FSPCFLGLR 507


>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 2 FIGCFLGV 9
F+G F+GV
Sbjct: 1226 FVGAFIGV 1233


>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)

Query: 1 IFIGCFLGV 9
+++G FLGV
Sbjct: 454 MYLGAFLGV 462


>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 FIGCFLG 8
F GCF+G
Sbjct: 211 FRGCFVG 217


>sp|MVP_ZYMVC|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain

Query: 2 FIGCFLG 8
F GCF+G
Sbjct: 211 FRGCFVG 217


>sp|YR302_MIMIV|UNCHARACTERIZED protein R302|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IFIGCFL 7
IFIGC +
Sbjct: 21 IFIGCLM 27


>sp|HEMA_CVBON|HEMAGGLUTININ-ESTERASE coronavirus (strain Ontario) (BCoV)

Query: 1 IFIGCFLGV 9
IF+G LGV
Sbjct: 393 IFLGILLGV 401




49|SequenceR|250|241|TINLVIFIGC

>sp|NCAP_MOKV|NUCLEOPROTEIN virus (MOKV)

Query: 1 TINLVIFIGC 10
T NL+ F+GC
Sbjct: 308 TFNLIHFVGC 317


>sp|NCAP_IRKV|NUCLEOPROTEIN virus (IRKV)

Query: 1 TINLVIFIGC 10
T NL+ F+GC
Sbjct: 308 TFNLIHFVGC 317


>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)

Query: 3 NLVIFIGC 10
NL+ FIGC
Sbjct: 310 NLIHFIGC 317


>sp|NCAP_WCBV|NUCLEOPROTEIN Caucasian bat virus (WCBV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_KHUV|NUCLEOPROTEIN virus (KHUV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_EBLV1|NUCLEOPROTEIN bat lyssavirus 1 (strain

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_ARAV|NUCLEOPROTEIN virus (ARAV)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 3 NLVIFIGC 10
NL+ F+GC
Sbjct: 310 NLIHFVGC 317


>sp|RP35_RABPU|DNA-DIRECTED RNA polymerase 35 kDa|Rabbitpox virus (strain Utrecht) (RPV)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|F11_FOWPN|PROTEIN F11 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 TINLVIFIGC 10
+INLV +GC
Sbjct: 50 SINLVPLVGC 59


>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|RP35_VACCW|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 TINLVIFIGC 10
T+N+V F GC
Sbjct: 258 TMNIVNFFGC 267


>sp|YO25_BPHC1|UNCHARACTERIZED 13.1 kDa protein in|Haemophilus phage HP1 (strain HP1c1)

Query: 4 LVIFIGC 10
L++F+GC
Sbjct: 17 LIVFLGC 23


>sp|T3MO_BPP1|TYPE III restriction-modification enzyme EcoPI|Escherichia phage P1

Query: 3 NLVIFIGC 10
N V+F GC
Sbjct: 608 NKVVFYGC 615




50|SequenceR|255|246|AALVLTINLV

***** No hits found ******


51|SequenceR|260|251|ELKFVAALVL

***** No hits found ******


52|SequenceR|265|256|ISRDTELKFV

>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|VNS2_AHSV|NON-STRUCTURAL protein NS2|African horse sickness virus (AHSV)

Query: 2 SRDTELKFV 10
S DTE+K+V
Sbjct: 116 SFDTEIKYV 124


>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I83A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I83A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I80AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I80A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I80A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I79A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Grey

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I78AC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I77AF|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I68A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I66A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I56A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I56A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 4 DTELKFV 10
DTELK++
Sbjct: 358 DTELKYI 364


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I66A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I83A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I86A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300


>sp|RDRP_I49A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2 SRDTELKF 9
S+DTEL F
Sbjct: 293 SQDTELSF 300




53|SequenceR|270|261|RILPWISRDT

>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 1 RILPWISRD 9
R+LPW+ R+
Sbjct: 1636 RVLPWVDRN 1644


>sp|POL1_APMV|RNA1 polyprotein|Andean potato mottle virus (APMV)

Query: 1 RILPWISR 8
R LPW+SR
Sbjct: 534 RDLPWLSR 541


>sp|DNBI_GAHVM|MAJOR DNA-binding protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 ILPWISR 8
+LPWI R
Sbjct: 928 VLPWIER 934


>sp|PORTL_BPP22|PORTAL protein|Salmonella phage P22 (Bacteriophage P22)

Query: 2 ILPWISRDT 10
+ PW+++DT
Sbjct: 208 VFPWLTQDT 216


>sp|YL019_MIMIV|UNCHARACTERIZED protein L19|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 ILPWISRDT 10
I P+I+RDT
Sbjct: 62 ICPYINRDT 70


>sp|VG63_ICHVA|UNCHARACTERIZED protein ORF63|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 RILPWISRD 9
R+ PW++RD
Sbjct: 592 RLTPWMTRD 600


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2 ILPWISRDT 10
++PWIS T
Sbjct: 507 VVPWISNTT 515


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2 ILPWISRDT 10
++PWIS T
Sbjct: 508 VVPWISNTT 516


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2 ILPWISRDT 10
++PWIS T
Sbjct: 507 VVPWISNTT 515


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2 ILPWISRDT 10
++PWIS T
Sbjct: 508 VVPWISNTT 516


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 4 PWISRDT 10
PWI DT
Sbjct: 190 PWIDEDT 196


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2 ILPWISR 8
+ PWISR
Sbjct: 629 VAPWISR 635


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2 ILPWIS 7
I+PWIS
Sbjct: 485 IIPWIS 490


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 2 ILPWIS 7
I+PWIS
Sbjct: 483 IIPWIS 488


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2 ILPWISRDT 10
++PWIS T
Sbjct: 507 VVPWISNVT 515


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 ILPWISRDT 10
++PWIS T
Sbjct: 507 VVPWISNVT 515


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 2 ILPWISRDT 10
++PW+ + T
Sbjct: 1055 VIPWLEKKT 1063


>sp|009L_FRG3G|PUTATIVE helicase 009L|Frog virus 3 (isolate Goorha)

Query: 1 RILPWISR 8
++ PW+SR
Sbjct: 10 KLYPWLSR 17


>sp|POLG_BOVEV|GENOME polyprotein|Bovine enterovirus (strain VG-5-27) (BEV)

Query: 2 ILPWIS 7
++PWIS
Sbjct: 483 VIPWIS 488


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 2 ILPWIS 7
++PWIS
Sbjct: 491 VIPWIS 496


>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains

Query: 2 ILPWISR 8
+LPW SR
Sbjct: 134 LLPWSSR 140


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 2 ILPWIS 7
++PWIS
Sbjct: 491 VIPWIS 496


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 2 ILPWIS 7
++PWIS
Sbjct: 491 VIPWIS 496


>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10

Query: 4 PWISRDT 10
PW RDT
Sbjct: 91 PWTLRDT 97


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 2 ILPWIS 7
++PWIS
Sbjct: 491 VIPWIS 496


>sp|VF295_IIV3|UNCHARACTERIZED protein 016R|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 ILPWISRDT 10
++ WI +DT
Sbjct: 934 VMEWIDQDT 942




54|SequenceR|275|266|GGRYIRILPW

>sp|RDRP_SHMV|REPLICASE large subunit|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 2 GRYIRILP 9
GRY+R+LP
Sbjct: 1541 GRYLRLLP 1548


>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)

Query: 4 YIRILPW 10
YIRIL W
Sbjct: 248 YIRILAW 254


>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 YIRILPW 10
YIRIL W
Sbjct: 248 YIRILAW 254


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 4 YIRILP 9
YIRILP
Sbjct: 24 YIRILP 29


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 4 YIRILP 9
YIRILP
Sbjct: 24 YIRILP 29


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 1 GGRYIRILPW 10
GG+ +LPW
Sbjct: 848 GGKVSFVLPW 857


>sp|53DR_BPSPB|5'(3')-DEOXYRIBONUCLEOTIDASE phage SPbeta (Bacillus phage

Query: 3 RYIRILPW 10
R+IR++ W
Sbjct: 157 RFIRVMNW 164


>sp|VG11_ALHV1|UNCHARACTERIZED gene 11 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 GRYIRILP 9
G Y+R+LP
Sbjct: 141 GLYLRVLP 148


>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus

Query: 2 GRYIRILPW 10
GRY +++P+
Sbjct: 343 GRYDKVMPY 351


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 1 GGRYIRILP 9
GGR + +LP
Sbjct: 578 GGRAVNLLP 586


>sp|RPOL_BPT7|T7 RNA polymerase|Escherichia phage T7 (Bacteriophage T7)

Query: 1 GGRYIRILP 9
GGR + +LP
Sbjct: 555 GGRAVNLLP 563


>sp|PG115_VACCW|CORE protein OPG115|Vaccinia virus (strain Western Reserve)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|D3_VARV|CORE protein D3|Variola virus

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|D3_RABPU|27 kDa core protein|Rabbitpox virus (strain Utrecht) (RPV)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|D3_CAMPS|27 kDa core protein|Camelpox virus (strain CMS)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|D3_CAMPM|27 kDa core protein|Camelpox virus (strain M-96)

Query: 1 GGRYIRI 7
GGRYI +
Sbjct: 70 GGRYIEV 76


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 GGRYIRILP 9
GGR + +LP
Sbjct: 556 GGRAVNLLP 564


>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P

Query: 1 GGRYIRIL 8
GGR +RIL
Sbjct: 226 GGRTVRIL 233


>sp|RPOL_BPKMV|DNA-DIRECTED RNA polymerase|Pseudomonas phage phiKMV

Query: 1 GGRYIRILP 9
GG Y+ +LP
Sbjct: 535 GGAYVNLLP 543


>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41

Query: 4 YIRILPW 10
Y+R+ PW
Sbjct: 57 YLRLFPW 63


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 1 GGRYIRILPW 10
GGR +PW
Sbjct: 620 GGRVYEEIPW 629




55|SequenceR|280|271|EILLFGGRYI

>sp|YL678_MIMIV|PUTATIVE SET domain-containing protein L678|Acanthamoeba polyphaga mimivirus

Query: 1 EILLFGGRYI 10
EILL+G +Y+
Sbjct: 112 EILLYGAKYM 121


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 4 LFGGRY 9
LFGGRY
Sbjct: 6 LFGGRY 11


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 LFGGRY 9
LFGGRY
Sbjct: 6 LFGGRY 11


>sp|RDRP_BNYVS|REPLICASE necrotic yellow vein virus

Query: 1 EILLFGGRYI 10
E+LLFGG +
Sbjct: 11 EVLLFGGESV 20


>sp|RIR1_EHV4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 4 (strain 1942)

Query: 2 ILLFGGR 8
I+LFGGR
Sbjct: 209 IMLFGGR 215


>sp|RIR1_EHV1B|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Equine herpesvirus 1 (strain Ab4p)

Query: 2 ILLFGGR 8
I+LFGGR
Sbjct: 210 IMLFGGR 216


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 ILLFGGRYI 10
+ L GGRY+
Sbjct: 1037 VALLGGRYV 1045


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 ILLFGGRYI 10
+ L GGRY+
Sbjct: 1041 VALLGGRYV 1049


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 ILLFGGRYI 10
+ L GGRY+
Sbjct: 1041 VALLGGRYV 1049


>sp|POLG_BVDVC|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 ILLFGGRYI 10
+ L GGRY+
Sbjct: 1041 VALLGGRYV 1049


>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 EILLFGGR 8
EIL+ GGR
Sbjct: 436 EILVLGGR 443


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 1 EILLFGGR 8
EIL+ GGR
Sbjct: 436 EILVLGGR 443


>sp|VME1_WBV24|MEMBRANE protein|White bream virus (isolate Blicca

Query: 2 ILLFGGRY 9
++LF GRY
Sbjct: 183 VILFSGRY 190




56|SequenceR|285|276|LLFLFEILLF

>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 LFLFEILLF 10
LF+F +LLF
Sbjct: 1119 LFIFSLLLF 1127


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 LLFLFEILLF 10
LL++ E++LF
Sbjct: 510 LLYILELILF 519




57|SequenceR|290|281|YTNIGLLFLF

***** No hits found ******


58|SequenceR|295|286|AQRWGYTNIG

>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 5795 QQWGYT 5800


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 5770 QQWGYT 5775


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 6230 QQWGYT 6235


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 6226 QQWGYT 6231


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 6174 QQWGYT 6179


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 6182 QQWGYT 6187


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 6202 QQWGYT 6207


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 6232 QQWGYT 6237


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 QRWGYT 7
Q+WGYT
Sbjct: 5879 QQWGYT 5884


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 QRWGYT 7
+RWGYT
Sbjct: 587 KRWGYT 592


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 2 QRWGYT 7
+RWGYT
Sbjct: 587 KRWGYT 592


>sp|VP4_ROT46|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 2 QRWGYT 7
Q WGYT
Sbjct: 187 QEWGYT 192


>sp|B14_RFVKA|PROTEIN B14 homolog|Rabbit fibroma virus (strain Kasza)

Query: 1 AQRWGYTN 8
A+ WGY N
Sbjct: 101 AEYWGYDN 108


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 QRWGYTNI 9
+ WGYT++
Sbjct: 2682 EAWGYTDL 2689


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 586 KRWGYS 591


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 QRWGYT 7
Q+WGY+
Sbjct: 5713 QQWGYS 5718


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 QRWGYT 7
Q+WGY+
Sbjct: 5711 QQWGYS 5716


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 QRWGYT 7
Q+WGY+
Sbjct: 5711 QQWGYS 5716


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 586 KRWGYS 591


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 586 KRWGYS 591


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 586 KRWGYS 591


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVGB|PROTEIN P|Gibbon hepatitis B virus subtype

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 582 KRWGYS 587


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 589 KRWGYS 594


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 589 KRWGYS 594


>sp|DEPOL_BPK41|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage KN4-1 (Bacteriophage KN4-1)

Query: 4 WGYTNI 9
WGY N+
Sbjct: 532 WGYANV 537


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 QRWGYT 7
Q+WG+T
Sbjct: 6170 QQWGFT 6175


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 QRWGYT 7
Q+WG+T
Sbjct: 6147 QQWGFT 6152


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 QRWGYT 7
Q+WG+T
Sbjct: 6145 QQWGFT 6150


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 QRWGYT 7
Q+WG+T
Sbjct: 6141 QQWGFT 6146


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 QRWGYT 7
Q+WG+T
Sbjct: 6153 QQWGFT 6158


>sp|DPOL_HBVOR|PROTEIN P|Orangutan hepatitis B virus (isolate

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 586 KRWGYS 591


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 586 KRWGYS 591


>sp|DPOL_HBVGO|PROTEIN P|Gorilla hepatitis B virus (isolate

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 582 KRWGYS 587


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 589 KRWGYS 594


>sp|DPOL_HBVCP|PROTEIN P|Chimpanzee hepatitis B virus (isolate

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 589 KRWGYS 594


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 582 KRWGYS 587


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 576 KRWGYS 581


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 589 KRWGYS 594


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 589 KRWGYS 594


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|RDRP_ESRV9|RNA-DIRECTED RNA polymerase|Eriocheir sinensis reovirus (isolate China/905)

Query: 4 WGYTNI 9
WGYT +
Sbjct: 325 WGYTGV 330


>sp|DPOL_POV01|DNA polymerase|Pyramimonas orientalis virus (PoV01)

Query: 4 WGYTN 8
WG+TN
Sbjct: 108 WGFTN 112


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 2 QRWGYT 7
+RWGY+
Sbjct: 587 KRWGYS 592


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 2 QRWGYTNI 9
+ WGYT +
Sbjct: 2724 EAWGYTEL 2731


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 2 QRWGYTNI 9
+ WGYT +
Sbjct: 2724 EAWGYTEL 2731


>sp|DPOLA_BPPM6|DNA-DIRECTED DNA polymerase|Pseudomonas phage M6

Query: 1 AQRWGY 6
A+RWG+
Sbjct: 152 AERWGF 157


>sp|EXO74_BPE32|3'-5' exonuclease gp74|Escherichia phage Phieco32 (Escherichia coli

Query: 1 AQRWGY 6
+RWGY
Sbjct: 36 GERWGY 41


>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)

Query: 3 RWGYTN 8
RW YTN
Sbjct: 544 RWMYTN 549




59|SequenceR|300|291|VHNVGAQRWG

>sp|VP2_BTV10|OUTER capsid protein VP2|Bluetongue virus 10 (isolate USA)

Query: 2 HNVGAQRW 9
+ VG QRW
Sbjct: 207 YQVGTQRW 214


>sp|FUS_RINDR|FUSION glycoprotein F0|Rinderpest virus (strain RBOK) (RDV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 300 YNIGSQEW 307


>sp|FUS_RINDL|FUSION glycoprotein F0|Rinderpest virus (strain L) (RDV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 300 YNIGSQEW 307


>sp|FUS_RINDK|FUSION glycoprotein F0|Rinderpest virus (strain Kabete O)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 300 YNIGSQEW 307


>sp|FUS_RINDB|FUSION glycoprotein F0|Rinderpest virus (strain RBT1) (RDV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 300 YNIGSQEW 307


>sp|FUS_PHODV|FUSION glycoprotein F0|Phocine distemper virus (PDV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 291 YNIGSQEW 298


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 307 YNIGSQEW 314


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 304 YNIGSQEW 311


>sp|FUS_CDVO|FUSION glycoprotein F0|Canine distemper virus (strain Onderstepoort)

Query: 2 HNVGAQRW 9
+N+G+Q W
Sbjct: 416 YNIGSQEW 423


>sp|RIR1_ASFWA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 VHNVGAQRW 9
+HN G RW
Sbjct: 322 IHNRGDGRW 330


>sp|RIR1_ASFP4|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|African swine fever virus (isolate

Query: 1 VHNVGAQRW 9
+HN G RW
Sbjct: 322 IHNRGDGRW 330


>sp|POL2_BBWV2|RNA2 polyprotein|Broad bean wilt virus 2

Query: 1 VHNVGAQRW 9
+ NVG+QR+
Sbjct: 425 IRNVGSQRF 433


>sp|VPN7_BPPHE|TAIL fiber protein|Enterococcus phage phiEF24C (Enterococcus bacteriophage

Query: 3 NVGAQRWG 10
N+G RWG
Sbjct: 1424 NLGFGRWG 1431


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2 HNVGAQRWG 10
HN+GAQ G
Sbjct: 973 HNLGAQPSG 981


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2 HNVGAQRWG 10
HN+GAQ G
Sbjct: 973 HNLGAQPSG 981


>sp|R1A_WBV24|REPLICASE polyprotein 1a|White bream virus (isolate Blicca

Query: 1 VHNVGA 6
VHN+GA
Sbjct: 1654 VHNIGA 1659


>sp|R1AB_WBV24|REPLICASE polyprotein 1ab|White bream virus (isolate Blicca

Query: 1 VHNVGA 6
VHN+GA
Sbjct: 1654 VHNIGA 1659




60|SequenceR|305|296|LEFILVHNVG

>sp|NSP_TGMVY|NUCLEAR shuttle protein|Tomato golden mosaic virus (strain

Query: 2 EFILVHNVG 10
EF++VHN
Sbjct: 64 EFVMVHNTA 72


>sp|NSP_TMOV|NUCLEAR shuttle protein|Tomato mottle virus (isolate Florida)

Query: 2 EFILVHN 8
EF+L HN
Sbjct: 64 EFVLAHN 70


>sp|POL2_RRVS|RNA2 polyprotein|Raspberry ringspot virus (strain S)

Query: 3 FILVHNVG 10
FI+VH +G
Sbjct: 903 FIIVHKLG 910




61|SequenceR|310|301|NSRPNLEFIL

>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 1 NSRPNLEFI 9
N+ PNLEFI
Sbjct: 189 NTLPNLEFI 197


>sp|YR405_MIMIV|PUTATIVE RNA methyltransferase R405|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 NSRPNLEFI 9
N+ PN+EFI
Sbjct: 277 NNIPNIEFI 285




62|SequenceR|315|306|HQHSLNSRPN

>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 HQHSLNSRP 9
+QH+LN P
Sbjct: 2133 YQHALNELP 2141


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 HQHSLNSRP 9
+QH+LN P
Sbjct: 2133 YQHALNELP 2141


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 HQHSLNSRP 9
+QH+LN P
Sbjct: 2133 YQHALNELP 2141


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 HQHSLNSRP 9
+QH+LN P
Sbjct: 2133 YQHALNELP 2141


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 HQHSLNSRP 9
+QH+LN P
Sbjct: 2133 YQHALNELP 2141


>sp|YORQ_TTV1K|UNCHARACTERIZED 7.3 kDa protein|Thermoproteus tenax virus 1 (strain

Query: 3 HSLNSRP 9
HSL+SRP
Sbjct: 38 HSLSSRP 44


>sp|ORFC_ELHVK|PROTEIN ORF C|Elephantid herpesvirus 1 (isolate Asian

Query: 1 HQHSLNSRP 9
H+ SLN RP
Sbjct: 131 HRASLNDRP 139


>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 1 HQHSLNSRPN 10
H H LN R N
Sbjct: 365 HAHMLNERGN 374


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HQHSLNSRPN 10
H H LN R N
Sbjct: 366 HAHMLNERGN 375




63|SequenceR|320|311|AIEFLHQHSL

>sp|CAPSD_CMVSI|COAT protein|Cymbidium mosaic virus (strain Singapore)

Query: 4 FLHQHSL 10
+LHQHSL
Sbjct: 207 WLHQHSL 213


>sp|GSTA_BPT4|DNA alpha-glucosyltransferase|Enterobacteria phage T4 (Bacteriophage

Query: 1 AIEFLHQH 8
A EFL+QH
Sbjct: 377 AYEFLYQH 384


>sp|YL484_MIMIV|PUTATIVE ankyrin repeat protein L484|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IEFLHQHS 9
IEFL+ HS
Sbjct: 997 IEFLNTHS 1004


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 1 AIEFLHQH 8
+IE++HQH
Sbjct: 534 SIEWIHQH 541


>sp|RPOL_BPK11|DNA-DIRECTED RNA polymerase|Enterobacteria phage K11 (Bacteriophage K11)

Query: 3 EFLHQHSL 10
E LHQH++
Sbjct: 603 EVLHQHAV 610


>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 3 EFLHQHS 9
EF+H HS
Sbjct: 356 EFIHLHS 362


>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain

Query: 3 EFLHQHS 9
EF+H HS
Sbjct: 357 EFIHLHS 363


>sp|KR74_ICHVA|PROTEIN kinase ORF74|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 AIEFLHQHSL 10
+E+LH H +
Sbjct: 239 GLEYLHMHGV 248




64|SequenceR|325|316|IGLFGAIEFL

>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 2 GLFGAIE 8
GL+GAIE
Sbjct: 685 GLYGAIE 691


>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 2 GLFGAIE 8
GL+GAIE
Sbjct: 685 GLYGAIE 691


>sp|PA_I34A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fowl

Query: 2 GLFGAIE 8
GL+GAIE
Sbjct: 685 GLYGAIE 691


>sp|POL2_BAMMU|GENOME polyprotein 2|Barley mild mosaic virus (strain

Query: 1 IGLFGAIE 8
IGLFGA +
Sbjct: 37 IGLFGAFD 44


>sp|POL2_BAMMN|GENOME polyprotein 2|Barley mild mosaic virus (strain

Query: 1 IGLFGAIE 8
IGLFGA +
Sbjct: 37 IGLFGAFD 44


>sp|POL2_BAMMA|GENOME polyprotein 2|Barley mild mosaic virus (strain

Query: 1 IGLFGAIE 8
IGLFGA +
Sbjct: 37 IGLFGAFD 44


>sp|ICP4_SUHVK|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain Kaplan)

Query: 1 IGLFGAIEFL 10
+G GA+E+L
Sbjct: 1132 LGFAGAVEYL 1141


>sp|ICP4_SUHVF|MAJOR viral transcription factor ICP4|Suid herpesvirus 1 (strain

Query: 1 IGLFGAIEFL 10
+G GA+E+L
Sbjct: 1148 LGFAGAVEYL 1157




65|SequenceR|330|321|SLCWLIGLFG

>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2 LCWLIGLFG 10
L WL+ LFG
Sbjct: 1241 LTWLVKLFG 1249


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 2 LCWLIGLF 9
LCWL G++
Sbjct: 75 LCWLSGIY 82


>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 CWLIGLF 9
CWL G F
Sbjct: 7 CWLFGYF 13


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 CWLIGLFG 10
CWL+ FG
Sbjct: 2641 CWLVFTFG 2648


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 CWLIGLFG 10
CWL+ FG
Sbjct: 2641 CWLVFTFG 2648


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 CWLIGLFG 10
CWL+ FG
Sbjct: 2643 CWLVFTFG 2650


>sp|YR455_MIMIV|UNCHARACTERIZED protein R455|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 LCWLIGL 8
LCW +G+
Sbjct: 131 LCWFLGI 137


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 CWLIGLFG 10
CWL+ FG
Sbjct: 2641 CWLVFTFG 2648


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 CWLIGLFG 10
CWL+ FG
Sbjct: 2641 CWLVFTFG 2648


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 CWLIGLFG 10
CWL+ FG
Sbjct: 2643 CWLVFTFG 2650


>sp|ENV_AVISU|ENVELOPE glycoprotein|UR2 avian sarcoma virus (UR2SV)

Query: 4 WLIGLFG 10
WL GLFG
Sbjct: 102 WLRGLFG 108


>sp|ITP_GAHVM|INNER tegument protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 LCWLIG 7
+CWL+G
Sbjct: 897 ICWLLG 902


>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)

Query: 4 WLIGLFG 10
WL+ LFG
Sbjct: 1206 WLLALFG 1212


>sp|ENV_NPVLD|ENVELOPE fusion protein|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 2 LCWLIG 7
CWL+G
Sbjct: 566 FCWLVG 571


>sp|ENV_AVISR|ENVELOPE glycoprotein gp95|Avian sarcoma virus (strain rASV1441)

Query: 4 WLIGLFG 10
WL GLFG
Sbjct: 173 WLRGLFG 179


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 SLCWLIGLFG 10
S WL LFG
Sbjct: 1212 SWSWLFALFG 1221


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 SLCWLIGLFG 10
S WL LFG
Sbjct: 1212 SWSWLFALFG 1221


>sp|ENV_RSVSA|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup A

Query: 4 WLIGLFG 10
WL GLFG
Sbjct: 173 WLRGLFG 179


>sp|ENV_RSVSB|ENVELOPE glycoprotein gp95|Rous sarcoma virus subgroup B

Query: 4 WLIGLFG 10
WL GLFG
Sbjct: 540 WLRGLFG 546


>sp|ICP22_SHV21|TRANSCRIPTIONAL regulator ICP22 homolog|Saimiriine herpesvirus 2 (strain 11)

Query: 1 SLCWLIGLFG 10
S CW++ +G
Sbjct: 315 SWCWVVDFWG 324


>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United

Query: 3 CWLIGL 8
CW++G+
Sbjct: 221 CWIVGI 226


Query: 4 WLIGLFG 10
W+I +FG
Sbjct: 330 WMISIFG 336


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 1 SLCWLIGL 8
++CW +G+
Sbjct: 1284 TMCWWLGI 1291


>sp|VL1_PAPVE|MAJOR capsid protein L1|European elk papillomavirus (EEPV)

Query: 2 LCWLIGLF 9
+CWL LF
Sbjct: 322 ICWLNQLF 329


>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)

Query: 1 SLCWLIGLFG 10
S WL+GL G
Sbjct: 60 STLWLLGLDG 69


>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)

Query: 1 SLCWLIGLFG 10
S WL+GL G
Sbjct: 60 STLWLLGLDG 69


>sp|ENV_ALVA|ENVELOPE glycoprotein gp95|Avian leukosis virus subgroup A

Query: 4 WLIGLFG 10
WL GLFG
Sbjct: 533 WLRGLFG 539


>sp|ENV_AVIR3|ENVELOPE glycoprotein|Avian retrovirus RPL30

Query: 4 WLIGLFG 10
WL GLFG
Sbjct: 210 WLRGLFG 216


>sp|KR15_ICHVA|PROTEIN kinase ORF15|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 LCWLIGLF 9
L W +GLF
Sbjct: 287 LVWQVGLF 294


>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P

Query: 1 SLCWLIGLF 9
++CWL +F
Sbjct: 205 NVCWLYHIF 213




66|SequenceR|335|326|FCALLSLCWL

>sp|POL2_SDVS5|RNA2 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 2 CALLSLCW 9
CAL ++CW
Sbjct: 185 CALPNICW 192


>sp|Y057_OSHVF|PUTATIVE transmembrane protein ORF57|Ostreid herpesvirus 1 (isolate France)

Query: 2 CALLSLCW 9
C L+S+CW
Sbjct: 123 CFLISVCW 130


>sp|VP8_RRSVT|STRUCTURAL protein precursor VP8|Rice ragged stunt virus (isolate

Query: 1 FCALLSLCW 9
FC L+ +C+
Sbjct: 429 FCLLMGICY 437


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 CALLSLCW 9
C LL +CW
Sbjct: 771 CFLLFMCW 778


>sp|MCP_EHV2|MAJOR capsid protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 CALLSLC 8
CAL SLC
Sbjct: 452 CALRSLC 458


>sp|ORFA_PSHV1|UNCHARACTERIZED protein ORFA|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 CALLSLCW 9
C L+ CW
Sbjct: 43 CGLIPTCW 50


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 FCALLSLCW 9
FC + SL W
Sbjct: 2371 FCLIFSLFW 2379


>sp|AP3A_BCHK3|PROTEIN 3|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 1 FCALLSLCWL 10
FC + CWL
Sbjct: 120 FCRFIMRCWL 129


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 2 CALLSLCWL 10
C L+ L WL
Sbjct: 2720 CLLIRLAWL 2728


>sp|AP3A_BCRP3|PROTEIN 3|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 1 FCALLSLCWL 10
FC + CWL
Sbjct: 120 FCRFIMRCWL 129


>sp|AP3A_BC279|PROTEIN 3|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 1 FCALLSLCWL 10
FC + CWL
Sbjct: 120 FCRFIMRCWL 129


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 FCALLSLC 8
CA++S+C
Sbjct: 202 LCAIISIC 209


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 FCALLSLC 8
CA++S+C
Sbjct: 202 LCAIISIC 209




67|SequenceR|340|331|SIPAFFCALL

>sp|TGDS_MIMIV|UDP-D-GLUCOSE 4,6-dehydratase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 IPAFFCALL 10
IP F C+LL
Sbjct: 190 IPKFICSLL 198


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 1 SIPAFFCA 8
SIP+ FC+
Sbjct: 182 SIPSVFCS 189


>sp|Y022_OSHVF|UNCHARACTERIZED protein ORF22|Ostreid herpesvirus 1 (isolate France)

Query: 1 SIPAFFCA 8
SIPA CA
Sbjct: 1458 SIPAHICA 1465


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain

Query: 1 SIPAFFCALL 10
++PA FCA++
Sbjct: 70 AMPADFCAII 79


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 1 SIPAFFCA 8
S+P+ FC+
Sbjct: 182 SVPSIFCS 189


>sp|Y017_OSHVF|UNCHARACTERIZED protein ORF17|Ostreid herpesvirus 1 (isolate France)

Query: 1 SIPAFFCALL 10
SI FFC LL
Sbjct: 79 SIVEFFCCLL 88




68|SequenceR|345|336|YTPIVSIPAF

>sp|COLL6_MIMIV|COLLAGEN-LIKE protein 6|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YTPIVSIPAF 10
+TP+ ++P F
Sbjct: 1356 FTPVATVPGF 1365


>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1 YTPIVSIPAF 10
Y P+++IP+F
Sbjct: 147 YGPLLNIPSF 156


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1 YTPIVSIPAF 10
Y P+++IP+F
Sbjct: 147 YGPLLNIPSF 156


>sp|VG11_ICHVA|PUTATIVE zinc-binding protein ORF11|Ictalurid herpesvirus 1 (strain

Query: 1 YTPIVSIPAF 10
YTPI+ P F
Sbjct: 14 YTPIIMSPVF 23


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 YTPIVSIP 8
YTPI IP
Sbjct: 2880 YTPIDEIP 2887


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 YTPIVSIP 8
YTPI IP
Sbjct: 2880 YTPIDEIP 2887




69|SequenceR|350|341|ALPYVYTPIV

>sp|VNS1_BTV2A|NON-STRUCTURAL protein NS1|Bluetongue virus 2 (isolate USA)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AMPYIYVPI 149


>sp|VNS1_BTV1S|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate South

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AMPYIYVPI 149


>sp|VNS1_BTV17|NON-STRUCTURAL protein NS1|Bluetongue virus 17 (isolate USA)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AMPYIYVPI 149


>sp|VNS1_BTV13|NON-STRUCTURAL protein NS1|Bluetongue virus 13 (isolate USA)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AMPYIYVPI 149


>sp|VNS1_BTV11|NON-STRUCTURAL protein NS1|Bluetongue virus 11 (isolate USA)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AMPYIYVPI 149


>sp|VNS1_BTV10|NON-STRUCTURAL protein NS1|Bluetongue virus 10 (isolate USA)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AMPYIYVPI 149


>sp|VNS1_BTV20|NON-STRUCTURAL protein NS1|Bluetongue virus 20 (isolate Australia)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AIPYIYVPI 149


>sp|VNS1_BTV1A|NON-STRUCTURAL protein NS1|Bluetongue virus 1 (isolate Australia)

Query: 1 ALPYVYTPI 9
A+PY+Y PI
Sbjct: 141 AIPYIYVPI 149


>sp|VNS1_EHDV2|NON-STRUCTURAL protein NS1|Epizootic hemorrhagic disease virus 2

Query: 1 ALPYVYTPI 9
A PY+Y P+
Sbjct: 140 AFPYLYIPV 148


>sp|C792_SSV1|UNCHARACTERIZED protein C-792|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 1 ALPYVYTPIV 10
A+PY +TPIV
Sbjct: 416 AIPYSFTPIV 425


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 1 ALPYVYTP 8
ALPYV+ P
Sbjct: 365 ALPYVFMP 372


>sp|RDRP_TCV|RNA-DIRECTED RNA polymerase|Turnip crinkle virus (TCV)

Query: 1 ALPYVYTP 8
ALP V+TP
Sbjct: 177 ALPRVFTP 184


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 YVYTPIV 10
YVY+P+V
Sbjct: 213 YVYSPVV 219


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 YVYTPIV 10
YVY+P+V
Sbjct: 213 YVYSPVV 219


>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)

Query: 2 LPYVYTP 8
PY YTP
Sbjct: 426 FPYYYTP 432


>sp|VP3_AHSV6|CORE protein VP3|African horse sickness virus 6

Query: 1 ALPYVYT 7
A+PYVYT
Sbjct: 801 AMPYVYT 807


>sp|VP3_AHSV|CORE protein VP3|African horse sickness virus (AHSV)

Query: 1 ALPYVYT 7
A+PYVYT
Sbjct: 801 AMPYVYT 807


>sp|NEEDL_BPKVM|PROTEIN Gp5|Vibrio phage KVP40 (isolate Vibrio

Query: 3 PYVYTP 8
PYVY P
Sbjct: 159 PYVYRP 164


>sp|SPIKE_PEDV7|SPIKE glycoprotein|Porcine epidemic diarrhea virus (strain

Query: 1 ALPYVYTP 8
A+ YVYTP
Sbjct: 200 AMQYVYTP 207


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 ALPYVYTPI 9
+LPY Y P+
Sbjct: 586 SLPYYYIPV 594


>sp|POL2_TORVR|RNA2 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 LPYVYTPIV 10
LP++++P+V
Sbjct: 697 LPFLFSPLV 705


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 YVYTPIV 10
Y+YTP+V
Sbjct: 2667 YMYTPLV 2673


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 4 YVYTPIV 10
Y+YTP+V
Sbjct: 2667 YMYTPLV 2673


>sp|Y068_OSHVF|PUTATIVE transmembrane protein ORF68|Ostreid herpesvirus 1 (isolate

Query: 5 VYTPIV 10
VYTPIV
Sbjct: 61 VYTPIV 66




70|SequenceR|355|346|MFGYLALPYV

>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 3 GYLALPYV 10
GY LPYV
Sbjct: 1101 GYCGLPYV 1108


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 3 GYLALPYV 10
GY LPYV
Sbjct: 1101 GYCGLPYV 1108


>sp|POLG_BSTV1|GENOME polyprotein|Brome streak virus (strain 11-Cal)

Query: 2 FGYLALP 8
FGY++LP
Sbjct: 972 FGYVSLP 978


>sp|VP4_ROTBK|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 MFGYLALP 8
MF YL LP
Sbjct: 103 MFTYLVLP 110


>sp|VP4_ROTBB|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Cow/United

Query: 1 MFGYLALP 8
MF YL LP
Sbjct: 103 MFTYLVLP 110


>sp|VP4_ROTBA|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 MFGYLALP 8
MF YL LP
Sbjct: 103 MFTYLVLP 110


>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 1 MFGYLALP 8
MF YL LP
Sbjct: 103 MFTYLVLP 110


>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 FGYLALP 8
FG+LA+P
Sbjct: 498 FGWLAIP 504


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 4 YLALPYV 10
YL +PYV
Sbjct: 1098 YLGIPYV 1104


>sp|052L_FRG3G|UNCHARACTERIZED protein 052L|Frog virus 3 (isolate Goorha)

Query: 2 FGYLALPY 9
FGY+ +PY
Sbjct: 274 FGYVYVPY 281


>sp|CAPSD_GVAIS|CAPSID protein|Grapevine virus A (isolate Is

Query: 1 MFGYLAL 7
+FGY+AL
Sbjct: 42 LFGYIAL 48


>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3

Query: 2 FGYLALPY 9
GY A+PY
Sbjct: 58 LGYTAMPY 65


>sp|IR04_HCMVA|UNCHARACTERIZED protein IRL4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 FGYLALP 8
FGYL+ P
Sbjct: 98 FGYLSFP 104


>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P

Query: 1 MFGYLALPYV 10
+FGYLA +V
Sbjct: 187 VFGYLAAQHV 196


>sp|FRD_BPT5|DIHYDROFOLATE reductase|Escherichia phage T5 (Enterobacteria phage

Query: 4 YLALPY 9
YLALPY
Sbjct: 51 YLALPY 56




71|SequenceR|360|351|ILFFVMFGYL

>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 ILFFVMFGY 9
+LFFV GY
Sbjct: 1249 VLFFVCAGY 1257


>sp|CVC2_EHV1V|CAPSID vertex component 2|Equine herpesvirus 1 (strain V592)

Query: 1 ILFFVMFGYL 10
+L+FV GY+
Sbjct: 571 LLYFVCLGYI 580


>sp|CVC2_EHV1B|CAPSID vertex component 2|Equine herpesvirus 1 (strain Ab4p)

Query: 1 ILFFVMFGYL 10
+L+FV GY+
Sbjct: 571 LLYFVCLGYI 580


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 1 ILFFVMFG 8
ILFF M G
Sbjct: 403 ILFFTMIG 410


>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 2 LFFVMFG 8
LFFV FG
Sbjct: 651 LFFVAFG 657


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 2 LFFVMFG 8
LFFV FG
Sbjct: 651 LFFVAFG 657


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 ILFFVMFGYL 10
+LFF+ F YL
Sbjct: 2161 MLFFLPFNYL 2170


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 ILFFVMFGYL 10
+LFF+ F YL
Sbjct: 2161 MLFFLPFNYL 2170


>sp|POL2_CPSMV|RNA2 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 ILFFVMFGYL 10
I FFV FG L
Sbjct: 695 IAFFVAFGDL 704




72|SequenceR|365|356|TKTPNILFFV

>sp|REP78_AAV2S|PROTEIN Rep78|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 1 TKTPNILFFV 10
+K P LFFV
Sbjct: 71 SKAPEALFFV 80


>sp|REP68_AAV2S|PROTEIN Rep68|Adeno-associated virus 2 (isolate Srivastava/1982)

Query: 1 TKTPNILFFV 10
+K P LFFV
Sbjct: 71 SKAPEALFFV 80


>sp|POL1_BBWVS|RNA1 polyprotein|Broad bean wilt virus 1

Query: 2 KTPNILFF 9
KTP +LFF
Sbjct: 478 KTPFMLFF 485


>sp|VP3_BTV11|CORE protein VP3|Bluetongue virus 11 (isolate USA)

Query: 2 KTPNILF 8
K PNILF
Sbjct: 84 KVPNILF 90




73|SequenceR|370|361|SKYYFTKTPN

>sp|Y096_OSHVF|PUTATIVE RING finger protein ORF96|Ostreid herpesvirus 1 (isolate France)

Query: 3 YYFTKTP 9
Y FTKTP
Sbjct: 200 YCFTKTP 206


>sp|VP2_BTV11|OUTER capsid protein VP2|Bluetongue virus 11 (isolate USA)

Query: 1 SKYYFTK 7
SKYYF++
Sbjct: 887 SKYYFSR 893


>sp|VF359_IIV3|UNCHARACTERIZED protein 105R|Invertebrate iridescent virus 3 (IIV-3)

Query: 3 YYFTKTP 9
YY+T+TP
Sbjct: 99 YYYTQTP 105


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 1 SKYYFTK 7
+KY+FTK
Sbjct: 1958 TKYHFTK 1964


>sp|Y161B_ATV|UNCHARACTERIZED protein ORF161b|Acidianus two-tailed virus (ATV)

Query: 3 YYFTKTPN 10
YYF K P+
Sbjct: 65 YYFNKIPD 72


>sp|RP147_VACCW|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 SKYYFTKTPN 10
S ++F+K PN
Sbjct: 1238 SCHFFSKVPN 1247


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 SKYYFTKTPN 10
S ++F+K PN
Sbjct: 1237 SCHFFSKVPN 1246


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1 SKYYFTKTPN 10
S ++F+K PN
Sbjct: 1237 SCHFFSKVPN 1246


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 SKYYFTKTPN 10
S ++F+K PN
Sbjct: 1237 SCHFFSKVPN 1246


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 SKYYFTKTPN 10
S ++F+K PN
Sbjct: 1237 SCHFFSKVPN 1246


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1 SKYYFTKTPN 10
S ++F+K PN
Sbjct: 1237 SCHFFSKVPN 1246


>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 2 KYYFTKTPN 10
++YF K PN
Sbjct: 529 EWYFRKDPN 537




74|SequenceR|375|366|LLWFRSKYYF

>sp|POLG_PEV9U|GENOME polyprotein|Porcine enterovirus 9 (strain UKG/410/73)

Query: 4 FRSKYYF 10
FR KYYF
Sbjct: 1982 FRDKYYF 1988


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 2 LWFRSKYYF 10
LWFR YF
Sbjct: 265 LWFRISTYF 273


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 3 WFRSKYYF 10
WF++KY F
Sbjct: 2462 WFKAKYGF 2469


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 WFRSKYYF 10
WF++KY F
Sbjct: 2462 WFKAKYGF 2469


>sp|PRIM_EHV2|DNA primase|Equine herpesvirus 2 (strain 86/87)

Query: 1 LLWFRSKY 8
+ WFR+K+
Sbjct: 155 IFWFRAKF 162


>sp|Y066_NPVOP|UNCHARACTERIZED 98.6 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 LLWFRSKYY 9
L WF SK Y
Sbjct: 287 LFWFFSKIY 295


>sp|MP_TPCTV|PUTATIVE movement protein|Tomato pseudo-curly top virus (TPCTV)

Query: 1 LLWFRSKY 8
LL+FR KY
Sbjct: 35 LLYFRRKY 42


>sp|VL2_BPV2|MINOR capsid protein L2|Bos taurus papillomavirus 2 (Bovine

Query: 1 LLWFRSKYY 9
L WF +YY
Sbjct: 253 LNWFSKRYY 261


>sp|VL2_BPV1|MINOR capsid protein L2|Bovine papillomavirus type 1

Query: 1 LLWFRSKYY 9
L WF +YY
Sbjct: 253 LNWFSKRYY 261


>sp|VL2_BPV5|MINOR capsid protein L2|Bovine papillomavirus type 5

Query: 3 WFRSKYY 9
WF +YY
Sbjct: 257 WFSKRYY 263


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 LWFRSKYY 9
LWF K+Y
Sbjct: 2411 LWFLRKFY 2418


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 LWFRSKYY 9
LWF K+Y
Sbjct: 2404 LWFLRKFY 2411


>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 3 WFRSKYY 9
WF +YY
Sbjct: 246 WFSRRYY 252


>sp|PRIM_SHV21|DNA primase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LLWFRSKY 8
++WFR+K+
Sbjct: 137 IVWFRAKF 144


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 LWFRSKYY 9
LWF K+Y
Sbjct: 2411 LWFLRKFY 2418


>sp|YR864_MIMIV|PUTATIVE ankyrin repeat protein R864|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 RSKYYF 10
RSKYY+
Sbjct: 196 RSKYYY 201


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 LWFRSKYY 9
LWF K+Y
Sbjct: 2404 LWFLRKFY 2411


>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)

Query: 5 RSKYYF 10
+SKYYF
Sbjct: 12 KSKYYF 17


>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)

Query: 5 RSKYYF 10
+SKYYF
Sbjct: 12 KSKYYF 17


>sp|RP35_FOWPN|DNA-DIRECTED RNA polymerase 35 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 3 WFRSKYYF 10
WF S YF
Sbjct: 201 WFNSSVYF 208


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 3 WFRSKYY 9
W+R K+Y
Sbjct: 2215 WWRMKFY 2221




75|SequenceR|380|371|RFLLKLLWFR

>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 FLLKLLWFR 10
F LKL WF+
Sbjct: 2016 FKLKLYWFK 2024


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 FLLKLLWFR 10
F LKL WF+
Sbjct: 2016 FKLKLYWFK 2024


>sp|VF302_IIV3|PUTATIVE zinc finger protein 012R|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 RFLLKLLW 8
R LLK+LW
Sbjct: 165 RTLLKMLW 172




76|SequenceR|385|376|PATFVRFLLK

>sp|Y111_OSHVF|PUTATIVE transmembrane protein ORF111|Ostreid herpesvirus 1 (isolate France)

Query: 3 TFVRFLL 9
TFVRFL+
Sbjct: 145 TFVRFLI 151




77|SequenceR|390|381|GVKHFPATFV

>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 3 KHFPATF 9
KH+P TF
Sbjct: 921 KHYPVTF 927


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 3 KHFPATF 9
KH+P TF
Sbjct: 920 KHYPVTF 926


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 3 KHFPATF 9
KH+P TF
Sbjct: 930 KHYPVTF 936


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 3 KHFPATF 9
KH+P TF
Sbjct: 921 KHYPVTF 927


>sp|CAPSD_DSDNV|CAPSID protein VP1|Diatraea saccharalis densovirus (DsDNV)

Query: 2 VKHFPATF 9
+ +FPATF
Sbjct: 684 IHNFPATF 691


>sp|VP2_AHSV|OUTER capsid protein VP2|African horse sickness virus (AHSV)

Query: 3 KHFPATFV 10
+++PATF+
Sbjct: 128 EYYPATFI 135




78|SequenceR|395|386|WFDAFGVKHF

>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 1 WFDAFGVKH 9
WF F +KH
Sbjct: 96 WFGNFNLKH 104


>sp|POL_RSVSB|GAG-POL polyprotein|Rous sarcoma virus subgroup B

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|POL_RSVP|GAG-POL polyprotein|Rous sarcoma virus subgroup C

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|POL_ALVA|GAG-POL polyprotein|Avian leukosis virus subgroup A

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|POL_ALV|GAG-POL polyprotein|Avian leukosis virus (ALV)

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|GAG_RSVSB|GAG polyprotein|Rous sarcoma virus subgroup B

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|GAG_RSVP|GAG polyprotein|Rous sarcoma virus subgroup C

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|GAG_AVIMD|GAG polyprotein|Avian myelocytomatosis virus HBI

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|GAG_AVIMC|GAG polyprotein|Avian myelocytomatosis virus 29 (Avian

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|GAG_ALVA|GAG polyprotein|Avian leukosis virus subgroup A

Query: 1 WFDAFGVK 8
W DA+GV+
Sbjct: 308 WMDAWGVQ 315


>sp|CPM_LIYV9|MINOR capsid protein|Lettuce infectious yellows virus (isolate

Query: 1 WFDAFGV 7
WF+ FG+
Sbjct: 299 WFEKFGI 305


>sp|Y111_NPVOP|UNCHARACTERIZED 8.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 3 DAFGVKHF 10
DA+ V+HF
Sbjct: 2 DAYAVQHF 9


>sp|POL_MLVRK|POL polyprotein|Radiation murine leukemia virus (strain

Query: 1 WFDAFGVKH 9
W +AF KH
Sbjct: 325 WVEAFPTKH 333


>sp|POL_MLVRD|GAG-POL polyprotein|Radiation murine leukemia virus

Query: 1 WFDAFGVKH 9
W +AF KH
Sbjct: 1478 WVEAFPTKH 1486


>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)

Query: 1 WFDAFGVK 8
W D FG++
Sbjct: 134 WMDTFGLR 141


>sp|RUVV_VACCW|RESOLVASE OPG149|Vaccinia virus (strain Western Reserve)

Query: 1 WFDAFGVK 8
W D FG++
Sbjct: 134 WMDTFGLR 141


>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 WFDAFGVK 8
W D FG++
Sbjct: 123 WMDTFGLR 130


>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)

Query: 1 WFDAFGVK 8
W D FG++
Sbjct: 134 WMDTFGLR 141


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 WFDAFGVKHF 10
WF FGV F
Sbjct: 1481 WFIPFGVLGF 1490


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 WFDAFGVK 8
W +AFG++
Sbjct: 619 WAEAFGIQ 626


>sp|PG085_RFVKA|PROBABLE metalloendopeptidase G1-type|Rabbit fibroma virus (strain Kasza)

Query: 1 WFDAFGVKHF 10
+FD G+KH+
Sbjct: 90 FFDRDGLKHY 99


>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)

Query: 1 WFDAFGVK 8
W D FG K
Sbjct: 772 WEDVFGAK 779


>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 WFDAFGVK 8
W D FG K
Sbjct: 772 WEDVFGAK 779


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 3 DAFGVKH 9
D FG+KH
Sbjct: 15 DCFGLKH 21


>sp|Y01A_BPT4|UNCHARACTERIZED 12.1 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 WFDAFGVKH 9
WF+ VKH
Sbjct: 65 WFNKIEVKH 73


>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus

Query: 1 WFDAFGVK 8
W D FG++
Sbjct: 134 WMDIFGLR 141


>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 WFDAFGVK 8
W D FG++
Sbjct: 134 WMDIFGLR 141




79|SequenceR|400|391|LQDALWFDAF

>sp|TERM_ADECR|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 3 DALWFDAF 10
D LW DAF
Sbjct: 370 DCLWLDAF 377


>sp|TERM_ADECC|PRETERMINAL protein|Canine adenovirus serotype 1 (strain

Query: 3 DALWFDAF 10
D LW DAF
Sbjct: 255 DCLWLDAF 262


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DALWFDA 9
D +WFDA
Sbjct: 593 DEIWFDA 599


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DALWFDA 9
D +WFDA
Sbjct: 593 DEIWFDA 599


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 DALWFDA 9
D +WFDA
Sbjct: 593 DEIWFDA 599


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DALWFDA 9
D +WFDA
Sbjct: 593 DEIWFDA 599


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DALWFDA 9
D +WFDA
Sbjct: 593 DEIWFDA 599


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 DALWFDA 9
D +WFDA
Sbjct: 593 DEIWFDA 599


>sp|TERM_ADEB2|PRETERMINAL protein|Bovine adenovirus 2 (BAdV-2) (Mastadenovirus

Query: 3 DALWFDAF 10
D W DAF
Sbjct: 270 DCFWLDAF 277


>sp|GAG_IPHA|INTRACISTERNAL A-particle Gag-related polyprotein|Hamster intracisternal

Query: 4 ALWFDA 9
ALW+DA
Sbjct: 328 ALWYDA 333


>sp|LTP_GAHVM|LARGE tegument protein deneddylase|Gallid herpesvirus 2 (strain

Query: 1 LQDALWFDAF 10
+QD LW D +
Sbjct: 580 VQDRLWSDEY 589




80|SequenceR|405|396|VSLSNLQDAL

>sp|1102L_ASFM2|PROTEIN MGF 110-2L|African swine fever virus (isolate

Query: 1 VSLSNLQD 8
VSL+NLQD
Sbjct: 24 VSLANLQD 31


>sp|LEF8_NPVAC|PROBABLE DNA-directed RNA polymerase catalytic|Autographa californica

Query: 1 VSLSNLQDAL 10
VSL+NL++A+
Sbjct: 533 VSLTNLKNAM 542




81|SequenceR|410|401|LDMLIVSLSN

>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)

Query: 1 LDMLIVSLSN 10
LD IVSLSN
Sbjct: 418 LDFSIVSLSN 427


>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)

Query: 1 LDMLIVSLSN 10
LD IVSLSN
Sbjct: 418 LDFSIVSLSN 427


>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain

Query: 1 LDMLIVSLSN 10
LD IVSLSN
Sbjct: 418 LDFSIVSLSN 427


>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)

Query: 1 LDMLIVSLSN 10
LD IVSLSN
Sbjct: 418 LDFSIVSLSN 427


>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)

Query: 1 LDMLIVSLSN 10
LD IVSLSN
Sbjct: 418 LDFSIVSLSN 427


>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain

Query: 1 LDMLIVSLSN 10
LD IVSLSN
Sbjct: 418 LDFSIVSLSN 427




82|SequenceR|415|406|CIMYELDMLI

>sp|Y05A_BPT4|UNCHARACTERIZED 39.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 YELDMLI 10
YELDM++
Sbjct: 211 YELDMIV 217


>sp|POLG_SVDVU|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1399 VRYSLDMLV 1407


>sp|POLG_SVDVH|GENOME polyprotein|Swine vesicular disease virus (strain

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1399 VRYSLDMLV 1407


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1408 VRYSLDMLV 1416


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1407 VRYSLDMLV 1415


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1409 VRYSLDMLV 1417


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1407 VRYSLDMLV 1415


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1417 VRYSLDMLV 1425


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1405 VRYSLDMLV 1413


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1410 VRYSLDMLV 1418


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1398 VRYSLDMLV 1406


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1398 VRYSLDMLV 1406


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1399 VRYSLDMLV 1407


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1397 VRYSLDMLV 1405


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1397 VRYSLDMLV 1405


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1399 VRYSLDMLV 1407


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1399 VRYSLDMLV 1407


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1401 VRYSLDMLV 1409


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1396 VRYSLDMLV 1404


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2 IMYELDMLI 10
+ Y LDML+
Sbjct: 1415 VRYSLDMLV 1423




83|SequenceR|420|411|ELSYFCIMYE

>sp|Y028_OSHVF|UNCHARACTERIZED protein ORF28|Ostreid herpesvirus 1 (isolate France)

Query: 2 LSYFCIMYE 10
+ Y+C M+E
Sbjct: 191 MDYYCWMFE 199


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 4 YFCIMY 9
YFC++Y
Sbjct: 7 YFCLIY 12


>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 YFCIM 8
YFCIM
Sbjct: 208 YFCIM 212


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 LSYFCI 7
+SYFCI
Sbjct: 5469 MSYFCI 5474


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 LSYFCIMY 9
LSY CI Y
Sbjct: 3843 LSYLCIGY 3850


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 LSYFCIMY 9
LSY CI Y
Sbjct: 3849 LSYLCIGY 3856


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 2 LSYFCIMY 9
LSY CI Y
Sbjct: 3791 LSYLCIGY 3798


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 LSYFCIMY 9
L Y C MY
Sbjct: 3823 LGYMCTMY 3830


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 LSYFCIMY 9
L Y C MY
Sbjct: 3816 LGYMCTMY 3823


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 LSYFCIMY 9
LSY CI Y
Sbjct: 3849 LSYLCIGY 3856


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 LSYFCIMY 9
LSY CI Y
Sbjct: 3843 LSYLCIGY 3850


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 2 LSYFCIMY 9
LSY CI Y
Sbjct: 3791 LSYLCIGY 3798


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 LSYFCIMY 9
L Y C MY
Sbjct: 3816 LGYMCTMY 3823


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 LSYFCIMY 9
L Y C MY
Sbjct: 3823 LGYMCTMY 3830




84|SequenceR|425|416|EDWKLELSYF

>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)

Query: 2 DWKLELSYF 10
+WKLEL F
Sbjct: 2272 EWKLELPMF 2280


>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 1 EDWKLEL 7
EDW+LEL
Sbjct: 539 EDWRLEL 545


>sp|YL112_MIMIV|PUTATIVE ankyrin repeat protein L112|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DWKLELS 8
DW LELS
Sbjct: 312 DWALELS 318


>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)

Query: 2 DWKLE 6
DWKLE
Sbjct: 264 DWKLE 268


>sp|REPA_MSVPA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype E

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 163 DWATKLQYF 171


>sp|REPA_MSVSE|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype C

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|REPA_PASVK|REPLICATION-ASSOCIATED protein A|Panicum streak virus (isolate Kenya)

Query: 2 DWKLELSYF 10
DW +L+YF
Sbjct: 170 DWATKLNYF 178


>sp|LTP_SHV21|LARGE tegument protein deneddylase|Saimiriine herpesvirus 2 (strain 11)

Query: 1 EDWKLELSYF 10
++WK+E+ F
Sbjct: 1015 DNWKMEVDSF 1024


>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)

Query: 1 EDWKLEL 7
EDW LEL
Sbjct: 935 EDWILEL 941


>sp|POL_VILV2|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 1 EDWKLEL 7
EDW LEL
Sbjct: 935 EDWILEL 941


>sp|POL_VILV|GAG-POL polyprotein|Maedi visna virus (strain 1514)

Query: 1 EDWKLEL 7
EDW LEL
Sbjct: 935 EDWILEL 941


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1 EDWKLELSYF 10
E WK + YF
Sbjct: 815 EKWKSDYKYF 824


>sp|POL_VILV1|GAG-POL polyprotein|Maedi visna virus (strain 1514

Query: 1 EDWKLEL 7
EDW LEL
Sbjct: 935 EDWILEL 941


>sp|CAPSD_CACV4|CAPSID protein VP1|Canine calicivirus (strain 48) (CaCV)

Query: 1 EDWKLELSYF 10
E+WK SY+
Sbjct: 199 EEWKNFFSYY 208


>sp|REPA_MSVS|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|BXDN_CBDP|NON-TOXIC nonhemagglutinin type D|Clostridium botulinum D phage (Clostridium

Query: 3 WKLELSYF 10
W L L+YF
Sbjct: 332 WNLNLNYF 339


>sp|REP_PASVK|REPLICATION-ASSOCIATED protein|Panicum streak virus (isolate Kenya)

Query: 2 DWKLELSYF 10
DW +L+YF
Sbjct: 170 DWATKLNYF 178


>sp|REPA_MSVRA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype D

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWATKLQYF 172


>sp|REPA_MSVN|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|REPA_MSVK|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype A

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|BXCN_CBCP|NON-TOXIC nonhemagglutinin type C|Clostridium botulinum C phage (Clostridium

Query: 3 WKLELSYF 10
W L L+YF
Sbjct: 332 WNLNLNYF 339


>sp|POL_OMVVS|POL polyprotein|Ovine maedi visna related virus

Query: 1 EDWKLEL 7
EDW LEL
Sbjct: 515 EDWILEL 521


>sp|REP_MSVS|REPLICATION-ASSOCIATED protein|Maize streak virus genotype A

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|REP_MSVN|REPLICATION-ASSOCIATED protein|Maize streak virus genotype A

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|REP_MSVK|REPLICATION-ASSOCIATED protein|Maize streak virus genotype A

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|REP_MSVSE|REPLICATION-ASSOCIATED protein|Maize streak virus genotype C

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWSTKLQYF 172


>sp|REPA_MSVTA|REPLICATION-ASSOCIATED protein A|Maize streak virus genotype B

Query: 2 DWKLELSYF 10
DW +L YF
Sbjct: 164 DWATKLQYF 172




85|SequenceR|430|421|LLGKSEDWKL

>sp|POL_CAEVC|POL polyprotein|Caprine arthritis encephalitis virus (strain

Query: 1 LLGKSEDWKL 10
L GK EDW+L
Sbjct: 534 LPGKEEDWRL 543


>sp|POL_BIV29|GAG-POL polyprotein|Bovine immunodeficiency virus (strain R29)

Query: 1 LLGKSEDWK 9
L G SEDW+
Sbjct: 959 LPGSSEDWE 967


>sp|126R_IIV6|UNCHARACTERIZED protein 126R|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 KSEDWK 9
K EDWK
Sbjct: 201 KDEDWK 206


>sp|REP_TMOV|REPLICATION-ASSOCIATED protein|Tomato mottle virus (isolate Florida)

Query: 1 LLGKSEDWK 9
LLG +DW+
Sbjct: 277 LLGAQKDWQ 285


>sp|POL_OMVVS|POL polyprotein|Ovine maedi visna related virus

Query: 1 LLGKSEDWKL 10
L GK EDW L
Sbjct: 510 LPGKEEDWIL 519


>sp|RDRP_TBSVC|RNA-DIRECTED RNA polymerase|Tomato bushy stunt virus (strain

Query: 1 LLGKSEDWKL 10
LLGK +W+L
Sbjct: 559 LLGKLLEWQL 568


>sp|UL95_SHV21|GENE 34 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LLGKSEDWKL 10
L+ SE+WKL
Sbjct: 106 LVYDSEEWKL 115


>sp|VPN7_BPPHE|TAIL fiber protein|Enterococcus phage phiEF24C (Enterococcus

Query: 1 LLGKSEDWK 9
++ K EDW+
Sbjct: 251 MMNKEEDWR 259


>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18

Query: 4 KSEDWKL 10
K+EDW L
Sbjct: 92 KTEDWTL 98


>sp|REP_BGYMV|REPLICATION-ASSOCIATED protein|Bean golden yellow mosaic virus

Query: 1 LLGKSEDWK 9
L+G+ +DW+
Sbjct: 277 LIGEQKDWQ 285


>sp|REP_ABMVW|REPLICATION-ASSOCIATED protein|Abutilon mosaic virus (isolate West

Query: 1 LLGKSEDWK 9
LLG +DW+
Sbjct: 277 LLGAQKDWQ 285


>sp|CAPSD_MASV1|CAPSID polyprotein VP86|Mink astrovirus 1 (MAstV-1)

Query: 3 GKSEDWKL 10
GKS WKL
Sbjct: 188 GKSVSWKL 195


>sp|REP_PYMVV|REPLICATION-ASSOCIATED protein|Potato yellow mosaic virus (isolate

Query: 1 LLGKSEDWK 9
LLG DW+
Sbjct: 277 LLGAQRDWQ 285


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 GKSEDWK 9
K EDWK
Sbjct: 432 AKQEDWK 438


>sp|POL_VILVK|GAG-POL polyprotein|Maedi visna virus (strain KV1772)

Query: 1 LLGKSEDWKL 10
L G+ EDW L
Sbjct: 930 LPGREEDWIL 939




86|SequenceR|435|426|ESNNPLLGKS

>sp|36012_ASFM2|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 SNNPLLGK 9
SNNPLL K
Sbjct: 138 SNNPLLQK 145


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 3 NNPLLGKS 10
NNPL GK+
Sbjct: 410 NNPLSGKA 417


>sp|IBMP_FMVD|TRANSACTIVATOR/VIROPLASMIN protein|Figwort mosaic virus (strain DxS)

Query: 1 ESNNPLLGKS 10
E NPL GKS
Sbjct: 78 ERQNPLEGKS 87


>sp|36012_ASFWA|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 SNNPLLGK 9
SNNP+L K
Sbjct: 138 SNNPILQK 145


>sp|36012_ASFP4|PROTEIN MGF 360-12L|African swine fever virus (isolate

Query: 2 SNNPLLGK 9
SNNP+L K
Sbjct: 138 SNNPILQK 145


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 ESNNPLLGKS 10
E++NP LG+S
Sbjct: 638 ENDNPGLGQS 647


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 ESNNPLLGKS 10
E++NP LG+S
Sbjct: 638 ENDNPGLGQS 647


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 ESNNPLLGKS 10
E++NP LG+S
Sbjct: 638 ENDNPGLGQS 647


>sp|YR757_MIMIV|PUTATIVE F-box protein R757|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 SNNPLLGKS 10
+N+P LGK+
Sbjct: 189 NNHPFLGKN 197




87|SequenceR|440|431|CIGSEESNNP

>sp|UCK10_BWCOV|URIDINE kinase P10|Beluga whale coronavirus (strain SW1)

Query: 1 CIGSEESNNP 10
C+G E NNP
Sbjct: 98 CVGHYEVNNP 107


>sp|36013_ASFWA|PROTEIN MGF 360-13L|African swine fever virus (isolate

Query: 1 CIGSEESNNP 10
C+ S + NNP
Sbjct: 241 CLASTKDNNP 250


>sp|36013_ASFP4|PROTEIN MGF 360-13L|African swine fever virus (isolate

Query: 1 CIGSEESNNP 10
C+ S + NNP
Sbjct: 241 CLASTKDNNP 250


>sp|S3_DPIRV|UNCHARACTERIZED protein S3|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 2 IGSEESNN 9
IG E+SNN
Sbjct: 1007 IGKEDSNN 1014


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 1 CIGSEESN 8
CIG EE N
Sbjct: 294 CIGPEEEN 301


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 CIGSEESNN 9
C+G E SN+
Sbjct: 723 CVGPEASNS 731




88|SequenceR|445|436|YTYKHCIGSE

>sp|POLG_TEV|GENOME polyprotein|Tobacco etch virus (TEV)

Query: 3 YKHCIGSE 10
YK CIG E
Sbjct: 1098 YKFCIGKE 1105


>sp|DPOL_NPVLD|DNA polymerase|Lymantria dispar multicapsid nuclear polyhedrosis

Query: 1 YTYKHCIGS 9
Y+YK C G+
Sbjct: 74 YSYKSCYGT 82


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 3 YKHCIGS 9
Y+ CIGS
Sbjct: 2178 YRECIGS 2184


>sp|VP4_MPRVN|UNCHARACTERIZED protein VP4|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 2 TYKHCI 7
TY HCI
Sbjct: 772 TYTHCI 777


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 YKHCI 7
YKHC+
Sbjct: 1814 YKHCV 1818


>sp|Y065_AFV2P|UNCHARACTERIZED protein ORF65|Acidianus filamentous virus 2 (isolate

Query: 3 YKHCIGSE 10
+K CIG+E
Sbjct: 10 FKFCIGTE 17


>sp|S2_DPIRV|UNCHARACTERIZED protein S2|Diadromus pulchellus idnoreovirus 1 (DpIRV-1)

Query: 1 YTYKHCIGSE 10
YTYK C +E
Sbjct: 1161 YTYKICYWNE 1170


>sp|CAPSH_ASFM2|HEXON protein p72|African swine fever virus (isolate

Query: 3 YKHCIGSE 10
YKH +G E
Sbjct: 224 YKHLVGQE 231


>sp|NCAP_TIBVC|NUCLEOPROTEIN virus (strain CS132) (TIBV)

Query: 1 YTYKHCIGS 9
YT+ H IGS
Sbjct: 296 YTWIHMIGS 304


>sp|CAPSH_ASFK5|MAJOR capsid protein|African swine fever virus (isolate

Query: 3 YKHCIGSE 10
YKH +G E
Sbjct: 224 YKHLVGQE 231


>sp|CAPSH_ASFB7|HEXON protein p72|African swine fever virus (strain

Query: 3 YKHCIGSE 10
YKH +G E
Sbjct: 224 YKHLVGQE 231


>sp|CAPSH_ASFWA|MAJOR capsid protein|African swine fever virus (isolate

Query: 3 YKHCIGSE 10
YKH +G E
Sbjct: 224 YKHLVGQE 231


>sp|Y101_OSHVF|UNCHARACTERIZED protein ORF101|Ostreid herpesvirus 1 (isolate France)

Query: 3 YKHCI 7
YKHCI
Sbjct: 157 YKHCI 161


>sp|DPOL_NPVCF|DNA polymerase|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 1 YTYKHCIGS 9
Y+YK C S
Sbjct: 67 YSYKQCYNS 75


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 1 YTYKHCIGS 9
+ YK C+GS
Sbjct: 276 FWYKGCMGS 284


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 1 YTYKHCIGS 9
+ YK C+GS
Sbjct: 274 FWYKGCMGS 282


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 1 YTYKHCIGS 9
+ YK C+GS
Sbjct: 274 FWYKGCMGS 282


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 YKHCIG 8
+KHC+G
Sbjct: 5695 WKHCLG 5700


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 1 YTYKHCIGS 9
+ YK C+GS
Sbjct: 276 FWYKGCMGS 284


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 YKHCIG 8
+KHC+G
Sbjct: 5693 WKHCLG 5698


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 YKHCIG 8
+KHC+G
Sbjct: 5693 WKHCLG 5698




89|SequenceR|450|441|IARVGYTYKH

>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 IARVGYTY 8
+AR GYTY
Sbjct: 87 VARRGYTY 94


>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)

Query: 1 IARVGYTY 8
+AR GYTY
Sbjct: 87 VARRGYTY 94


>sp|TERL_BPP21|TERMINASE, large subunit|Enterobacteria phage P21 (Bacteriophage 21)

Query: 2 ARVGYT 7
ARVGYT
Sbjct: 78 ARVGYT 83


>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)

Query: 3 RVGYTYK 9
R+GY YK
Sbjct: 633 RIGYMYK 639


>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 RVGYTYK 9
R+GY YK
Sbjct: 633 RIGYMYK 639


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 2 ARVGYTYKH 10
A +GY +KH
Sbjct: 1292 ALIGYMHKH 1300


>sp|POL1_CPMVS|RNA1 polyprotein|Cowpea mosaic virus (strain SB)

Query: 1 IARVGYTYKH 10
I ++G TY H
Sbjct: 805 IGKIGETYYH 814


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 4 VGYTYKH 10
VGY Y H
Sbjct: 211 VGYNYTH 217


>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)

Query: 5 GYTYKH 10
GY YKH
Sbjct: 98 GYWYKH 103


>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)

Query: 5 GYTYKH 10
GY YKH
Sbjct: 98 GYWYKH 103




90|SequenceR|455|446|PICQVIARVG

>sp|KITH_BPT4|THYMIDINE kinase|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 ICQVIARVG 10
+C+V++R+G
Sbjct: 46 VCEVVSRIG 54


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 PICQVIAR 8
P CQ+IAR
Sbjct: 319 PDCQIIAR 326


>sp|GP40_BPSP1|GENE 40 protein|Bacillus phage SP01 (Bacteriophage SP01)

Query: 2 ICQVIARVG 10
+C++ ARVG
Sbjct: 97 LCKIPARVG 105


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 3 CQVIARVG 10
C V+ RVG
Sbjct: 93 CDVVVRVG 100




91|SequenceR|460|451|FRLWAPICQV

>sp|YL720_MIMIV|ENDONUCLEASE 8-like L720|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WAPICQV 10
W P+CQ+
Sbjct: 268 WCPVCQL 274


>sp|Y277_ATV|UNCHARACTERIZED protein ORF277|Acidianus two-tailed virus (ATV)

Query: 2 RLWAPI 7
RLW+PI
Sbjct: 209 RLWSPI 214


>sp|TMP_BPBMU|PROBABLE tape measure protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 FRLWAPICQ 9
+R W PI Q
Sbjct: 649 YRYWTPIKQ 657


>sp|DUHM_BPSP1|DEOXYURIDYLATE hydroxymethyltransferase|Bacillus phage SP01 (Bacteriophage SP01)

Query: 4 WAPICQV 10
W P+C++
Sbjct: 344 WIPLCEI 350


>sp|Y807_AFV1Y|PUTATIVE transmembrane protein ORF807|Acidianus filamentous virus 1

Query: 1 FRLWAPI 7
FRLWA I
Sbjct: 89 FRLWALI 95


>sp|MVP_TAVCV|MOVEMENT protein|Taro vein chlorosis virus (TAVCV)

Query: 4 WAPICQV 10
W P+C V
Sbjct: 64 WTPLCPV 70


>sp|US03_PSHV1|PROTEIN kinase US3 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 FRLWAPICQV 10
F W P C++
Sbjct: 467 FSSWKPACRI 476


>sp|YL494_MIMIV|UNCHARACTERIZED protein L494|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 WAPIC 8
W PIC
Sbjct: 146 WCPIC 150


>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 FRLWAPICQ 9
+R W P+C+
Sbjct: 685 WREWRPLCR 693


>sp|GPX_MCV1|GLUTATHIONE peroxidase|Molluscum contagiosum virus subtype 1

Query: 4 WAPICQ 9
W+P+C+
Sbjct: 167 WSPVCR 172


>sp|L_SBVBH|RNA-DIRECTED RNA polymerase L|Bovine Schmallenberg virus (isolate

Query: 4 WAPICQV 10
W P+C +
Sbjct: 1950 WIPVCPI 1956




92|SequenceR|465|456|RLCQIFRLWA

>sp|NS1_FPV|INITIATOR protein NS1|Feline panleukopenia virus (FPV)

Query: 1 RLCQIFRL 8
R CQIFR+
Sbjct: 87 RTCQIFRM 94


>sp|NS1_MEVA|INITIATOR protein NS1|Mink enteritis virus (strain Abashiri)

Query: 1 RLCQIFRL 8
R CQIFR+
Sbjct: 363 RTCQIFRM 370


>sp|NS1_FPV19|INITIATOR protein NS1|Feline panleukopenia virus (strain 193)

Query: 1 RLCQIFRL 8
R CQIFR+
Sbjct: 363 RTCQIFRM 370


>sp|NS1_PAVCN|INITIATOR protein NS1|Canine parvovirus type 2 (isolate

Query: 1 RLCQIFRL 8
R CQIFR+
Sbjct: 363 RTCQIFRM 370


>sp|NPH2_MYXVL|RNA helicase NPH-II|Myxoma virus (strain Lausanne) (MYXV)

Query: 3 CQIFRLWA 10
C+IF WA
Sbjct: 172 CKIFTSWA 179


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 2 LCQIFR 7
LCQ+FR
Sbjct: 694 LCQVFR 699


>sp|BRLF1_EHV2|PUTATIVE transcription activator BRLF1 homolog|Equine herpesvirus 2

Query: 3 CQIFRLW 9
C +F LW
Sbjct: 80 CNLFNLW 86


>sp|PSBD_BPSYS|PHOTOSYSTEM II D2 protein|Synechococcus phage syn9

Query: 1 RLCQIFRLWA 10
R CQ+ LWA
Sbjct: 102 RWCQLGGLWA 111


>sp|PSBD_BPSYR|PHOTOSYSTEM II D2 protein|Synechococcus phage S-RSM2

Query: 1 RLCQIFRLWA 10
R CQ+ LWA
Sbjct: 102 RWCQLGGLWA 111




93|SequenceR|470|461|TDRYRRLCQI

>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)

Query: 2 DRYRRLCQI 10
++YRR CQ+
Sbjct: 206 NKYRRFCQL 214


>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 2 DRYRRLCQI 10
++YRR CQ+
Sbjct: 206 NKYRRFCQL 214


>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 2 DRYRRLCQI 10
++YRR CQ+
Sbjct: 206 NKYRRFCQL 214


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 1 TDRYRRLC 8
+DRY RLC
Sbjct: 4755 SDRYYRLC 4762


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 TDRYRRLC 8
TDR+ RLC
Sbjct: 4744 TDRFFRLC 4751


>sp|078L_FRG3G|UNCHARACTERIZED protein 078L|Frog virus 3 (isolate Goorha)

Query: 1 TDRYRRLC 8
+DR+R LC
Sbjct: 198 SDRFRGLC 205


>sp|VG23_ICHVA|UNCHARACTERIZED protein ORF23|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 TDRYRRLCQI 10
TDR + LC++
Sbjct: 322 TDRVKGLCEV 331


>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)

Query: 4 YRRLCQ 9
Y+RLCQ
Sbjct: 11 YKRLCQ 16


>sp|CAPSD_AMCV|CAPSID protein|Artichoke mottled crinkle virus (AMCV)

Query: 1 TDRYRRLC 8
TDR +R C
Sbjct: 216 TDRIKRFC 223


>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)

Query: 4 YRRLCQ 9
Y+RLCQ
Sbjct: 11 YKRLCQ 16


>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann

Query: 4 YRRLCQ 9
Y+RLCQ
Sbjct: 11 YKRLCQ 16


>sp|YR839_MIMIV|UNCHARACTERIZED protein R839|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 TDRYRRLCQ 9
TDRY++L +
Sbjct: 300 TDRYKKLVE 308


>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 4 YRRLCQ 9
Y+RLCQ
Sbjct: 11 YKRLCQ 16


>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)

Query: 3 RYRRLCQI 10
R+R++CQ+
Sbjct: 286 RHRKMCQL 293


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 1 TDRYRRLCQI 10
+D+YR +C +
Sbjct: 2818 SDQYRSVCTV 2827


>sp|V127_FOWPV|PROTEIN FPV127|Fowlpox virus (FPV)

Query: 2 DRYRRLC 8
DRY +LC
Sbjct: 166 DRYTKLC 172


>sp|V127_FOWPN|PROTEIN FPV127|Fowlpox virus (strain NVSL) (FPV)

Query: 2 DRYRRLC 8
DRY +LC
Sbjct: 166 DRYTKLC 172


>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 2 DRYRRLCQ 9
D YRRL Q
Sbjct: 436 DEYRRLTQ 443


>sp|ENV_AVIRE|ENVELOPE glycoprotein|Avian reticuloendotheliosis virus

Query: 1 TDRYRRLC 8
TDR+ R+C
Sbjct: 188 TDRFGRIC 195


>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)

Query: 1 TDRYRRLC 8
T RYRR C
Sbjct: 899 TLRYRRAC 906


>sp|NEC1_PSHV1|NUCLEAR egress protein 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 DRYRRLCQI 10
D YRR C +
Sbjct: 298 DVYRRYCDV 306


>sp|LEF11_NPVST|LATE expression factor 11|Spodoptera litura multicapsid

Query: 3 RYRRLCQ 9
RY+RLC
Sbjct: 66 RYKRLCH 72




94|SequenceR|475|466|PFARKTDRYR

>sp|PORTL_BPCA1|PORTAL protein|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 PFARKTDRYR 10
PF++KT ++R
Sbjct: 13 PFSKKTKQWR 22


>sp|VF170_IIV6|UNCHARACTERIZED protein 170L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 PFARKTDRY 9
P RKTD+Y
Sbjct: 174 PLTRKTDKY 182


>sp|YR738_MIMIV|PUTATIVE BTB/POZ domain-containing protein R738|Acanthamoeba polyphaga

Query: 2 FARKTDRYR 10
F +KTDR++
Sbjct: 218 FNKKTDRHK 226


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 2 FARKTDRY 9
FAR TD Y
Sbjct: 31 FARATDTY 38




95|SequenceR|480|471|ANVLHPFARK

>sp|TRM3_EHV2|TRIPARTITE terminase subunit 3|Equine herpesvirus 2 (strain 86/87)

Query: 3 VLHPFARK 10
LHPF R+
Sbjct: 535 TLHPFVRE 542




96|SequenceR|485|476|TSYKGANVLH

>sp|REP_CPBDV|REPLICATION-ASSOCIATED protein|Chaetoceros protobacilladnavirus 2 (Chaetoceros sp

Query: 1 TSYKGANVLH 10
T YKG ++H
Sbjct: 318 TCYKGQRIVH 327


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 2 SYKGANVLH 10
+Y GA++LH
Sbjct: 333 TYTGADLLH 341


>sp|REP_AHEBV|REPLICATION-ASSOCIATED protein|Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV)

Query: 1 TSYKGANVLH 10
T+Y G V+H
Sbjct: 312 TAYNGQRVIH 321




97|SequenceR|490|481|VMFFTTSYKG

>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 3 FFTTSYK 9
FFTT YK
Sbjct: 863 FFTTGYK 869


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 VMFFTTSY 8
V+F+TTSY
Sbjct: 3600 VLFWTTSY 3607


>sp|HMUDK_BPS10|5-HMDU DNA kinase|Bacillus phage SP10 (Bacillus phage

Query: 1 VMFFTTSYKG 10
V F T+ YKG
Sbjct: 554 VFFITSVYKG 563


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 VMFFTTSY 8
V+F+TTSY
Sbjct: 3600 VLFWTTSY 3607


>sp|CAPSH_BPT6|MAJOR capsid protein|Enterobacteria phage T6 (Bacteriophage T6)

Query: 3 FFTTSYKG 10
+FT YKG
Sbjct: 433 YFTVGYKG 440


>sp|CAPSH_BPAR1|MAJOR capsid protein|Escherichia phage AR1 (Bacteriophage AR1)

Query: 3 FFTTSYKG 10
+FT YKG
Sbjct: 433 YFTVGYKG 440


>sp|CAPSH_BPT4|MAJOR capsid protein|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 FFTTSYKG 10
+FT YKG
Sbjct: 433 YFTVGYKG 440




98|SequenceR|495|486|LAAFTVMFFT

***** No hits found ******


99|SequenceR|500|491|KHTSYLAAFT

>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 HTSYLAAFT 10
H S LAAFT
Sbjct: 1051 HESLLAAFT 1059


>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 HTSYLAAFT 10
H S LAAFT
Sbjct: 1051 HESLLAAFT 1059


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 HTSYLAAFT 10
H S LAAFT
Sbjct: 1051 HESLLAAFT 1059


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 1 KHTSYLAAFT 10
KHT Y+ AF+
Sbjct: 540 KHTFYVFAFS 549




100|SequenceR|505|496|SHGREKHTSY

>sp|CAPSD_BPSK1|MAJOR capsid protein|Serratia phage KSP100 (Serratia marcescens

Query: 1 SHGREKHTSY 10
SHGREK Y
Sbjct: 99 SHGREKELFY 108


>sp|YL264_MIMIV|UNCHARACTERIZED WD repeat-containing protein L264|Acanthamoeba polyphaga mimivirus

Query: 1 SHGREKH 7
SHG++KH
Sbjct: 346 SHGKKKH 352


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2 HGREKHTSY 10
HGRE TS+
Sbjct: 1894 HGREPSTSW 1902


>sp|VPN2_BPPHE|PUTATIVE major capsid protein|Enterococcus phage phiEF24C (Enterococcus

Query: 1 SHGREKHTSY 10
+HGR HT +
Sbjct: 81 AHGRVGHTRF 90


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3386 GQEKYTDY 3393


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3385 GQEKYTDY 3392


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3386 GQEKYTDY 3393


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3385 GQEKYTDY 3392


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3385 GQEKYTDY 3392


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3385 GQEKYTDY 3392


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3385 GQEKYTDY 3392


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3 GREKHTSY 10
G+EK+T Y
Sbjct: 3385 GQEKYTDY 3392




101|SequenceR|510|501|FVMTDSHGRE

>sp|Y05F_BPT4|UNCHARACTERIZED 36.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 FVMTDSHGRE 10
F+MTD +G E
Sbjct: 304 FIMTDKNGWE 313


>sp|RDRP_ICRSV|RNA replication protein|Indian citrus ringspot virus (isolate

Query: 3 MTDSHGRE 10
+TD H RE
Sbjct: 1231 LTDKHSRE 1238




102|SequenceR|515|506|IWLYFFVMTD

>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38

Query: 1 IWLYFFVMTD 10
+W Y + +TD
Sbjct: 133 VWTYIYYLTD 142


>sp|ETFL_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 IWLYFFVMTD 10
+W+Y FV D
Sbjct: 591 LWVYLFVFLD 600


>sp|ETFL_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 IWLYFFVMTD 10
+W+Y FV D
Sbjct: 591 LWVYLFVFLD 600


>sp|VF134_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 IWLYFFVMTD 10
+W+Y FV D
Sbjct: 591 LWVYLFVFLD 600


>sp|EFTL_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 IWLYFFVMTD 10
+W+Y FV D
Sbjct: 591 LWVYLFVFLD 600


>sp|ETFL_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 IWLYFFVMTD 10
+W+Y FV D
Sbjct: 591 LWVYLFVFLD 600


>sp|VP1_POVMK|MAJOR capsid protein VP1|Murine polyomavirus (strain Kilham) (MPyV)

Query: 3 LYFFVM 8
LYFFVM
Sbjct: 362 LYFFVM 367


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 IWLYFFVMT 9
+WL FF+++
Sbjct: 1690 LWLVFFLIS 1698


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 IWLYFFVMT 9
+WL FF+++
Sbjct: 1720 LWLVFFLIS 1728


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 IWLYFFVMT 9
+WL FF+++
Sbjct: 1720 LWLVFFLIS 1728


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 1 IWLYFFVMT 9
+WL FF+++
Sbjct: 1720 LWLVFFLIS 1728


>sp|VF282_IIV6|PUTATIVE transcription factor 282R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 WLYFFVM 8
W Y FVM
Sbjct: 377 WKYMFVM 383


>sp|E413_ADE12|PROBABLE early E4 13 kDa|Human adenovirus A serotype 12

Query: 2 WLYFFVMTD 10
WLYF +T+
Sbjct: 57 WLYFAFLTE 65


>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23

Query: 1 IWLYFFVMTD 10
+W Y + TD
Sbjct: 133 VWSYIYYQTD 142


>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22

Query: 1 IWLYFFVMTD 10
+W Y + TD
Sbjct: 133 VWSYIYYQTD 142




103|SequenceR|520|511|IIYFVIWLYF

>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)

Query: 1 IIYFVIWLYF 10
++ F IW+YF
Sbjct: 117 LLVFGIWIYF 126


>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVC4|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVCP|LARGE envelope protein|Chimpanzee hepatitis B virus (isolate

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|VP16_BPPRD|PROTEIN P16|Enterobacteria phage PRD1 (Bacteriophage PRD1)

Query: 1 IIYFVIWLYF 10
++ +IWL+F
Sbjct: 14 LVLILIWLWF 23


>sp|HBSAG_WHV2|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 IIYFVIWLY 9
+++F+IW+Y
Sbjct: 422 VLFFLIWVY 430


>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 VIWLYF 10
+IW+YF
Sbjct: 181 LIWMYF 186


>sp|HBSAG_WHV4|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 IIYFVIWLY 9
+++F+IW+Y
Sbjct: 422 VLFFLIWVY 430


>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_WHV1|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 IIYFVIWLY 9
+++F+IW+Y
Sbjct: 417 VLFFLIWVY 425


>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVGO|LARGE envelope protein|Gorilla hepatitis B virus (isolate

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|YR710_MIMIV|UNCHARACTERIZED protein R710|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IIYFVIWLY 9
++Y + WLY
Sbjct: 182 LVYGIYWLY 190


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFYLWVY 388


>sp|HBSAG_WHV3|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 IIYFVIWLY 9
+++F+IW+Y
Sbjct: 422 VLFFLIWVY 430


>sp|HBSAG_WHV5|LARGE envelope protein|Woodchuck hepatitis B virus (isolate

Query: 1 IIYFVIWLY 9
+++F+IW+Y
Sbjct: 422 VLFFLIWVY 430


>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 392 IFFCLWVY 399


>sp|VF015_IRV22|UNCHARACTERIZED 15.9 kDa protein in|Simulium iridescent virus (IIV-22) (Insect

Query: 2 IYFVIWLYF 10
IY+ +W F
Sbjct: 78 IYYEVWFMF 86


>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 391 IFFCLWVY 398


>sp|HBSAG_HBVGB|LARGE envelope protein|Gibbon hepatitis B virus subtype

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 381 IFFCLWVY 388


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 391 IFFCLWVY 398


>sp|Y022_NPVOP|UNCHARACTERIZED 43.4 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 IIYFVIWLYF 10
++Y V+W ++
Sbjct: 13 LLYIVVWPFY 22


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 391 IFFCLWVY 398


>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G

Query: 2 IYFVIWLY 9
I+F +W+Y
Sbjct: 391 IFFCLWVY 398


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 4 FVIWLYF 10
++W+YF
Sbjct: 62 LILWIYF 68


>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge

Query: 1 IIYFVIWL 8
I++F++W+
Sbjct: 35 ILHFILWI 42


>sp|FIBL1_BPT5|SIDE tail fiber protein pb1|Escherichia phage T5 (Enterobacteria phage

Query: 3 YFVIWLY 9
YF +W Y
Sbjct: 317 YFEVWCY 323


>sp|LEF9_NPVAC|DNA-DIRECTED RNA polymerase subunit LEF-9|Autographa californica nuclear

Query: 2 IYFVIWLYF 10
IYF+ LYF
Sbjct: 5 IYFLTLLYF 13


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 6 IWLYF 10
+WLYF
Sbjct: 1600 VWLYF 1604


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 6 IWLYF 10
+WLYF
Sbjct: 1600 VWLYF 1604


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 6 IWLYF 10
+WLYF
Sbjct: 1600 VWLYF 1604


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 6 IWLYF 10
+WLYF
Sbjct: 1600 VWLYF 1604


>sp|061R_IIV6|UNCHARACTERIZED protein 061R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 IIYFVIWLYF 10
+I+ +W YF
Sbjct: 15 LIFIFLWAYF 24


>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 1 IIYFVIWL 8
I++F++W+
Sbjct: 35 ILHFILWI 42


>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain

Query: 3 YFVIWLYF 10
+F +W+YF
Sbjct: 140 HFEVWVYF 147


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 6 IWLYF 10
+WLYF
Sbjct: 1600 VWLYF 1604




104|SequenceR|525|516|TYCSSIIYFV

>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 TYCSSIIYFV 10
TYC SII ++
Sbjct: 178 TYCKSIIRYL 187


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 TYCSSIIYFV 10
TYC SII ++
Sbjct: 178 TYCKSIIRYL 187


>sp|A18_FOWPN|TRANSCRIPT termination protein A18|Fowlpox virus (strain NVSL) (FPV)

Query: 2 YCSSIIYFV 10
YC+SII F+
Sbjct: 244 YCNSIINFI 252




105|SequenceR|530|521|LDWILTYCSS

>sp|OBP_BPT5|PUTATIVE replication origin binding protein|Escherichia phage T5

Query: 1 LDWILTYC 8
+DW TYC
Sbjct: 887 VDWYRTYC 894


>sp|KR15_ICHVA|PROTEIN kinase ORF15|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 DWILTY 7
DWI+TY
Sbjct: 35 DWIMTY 40


>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United States/MNV1/2002/GV)

Query: 3 WILTYCS 9
WILT C+
Sbjct: 1494 WILTLCA 1500


>sp|Y146_AFV2P|UNCHARACTERIZED protein ORF146|Acidianus filamentous virus 2 (isolate

Query: 2 DWILTYCSS 10
DWI +CSS
Sbjct: 97 DWISDFCSS 105


>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 WILTYC 8
W TYC
Sbjct: 153 WFFTYC 158


>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 WILTYC 8
W TYC
Sbjct: 153 WFFTYC 158


>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 1 LDWILTYCS 9
LDW+ TY +
Sbjct: 794 LDWVKTYST 802


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 3 WILTYCSS 10
W+ TY SS
Sbjct: 942 WVATYTSS 949


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 3 WILTY 7
WILTY
Sbjct: 179 WILTY 183


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 3 WILTYCS 9
WI+T C+
Sbjct: 1594 WIITLCA 1600


>sp|O22R_FRG3G|PUTATIVE helicase 022R|Frog virus 3 (isolate Goorha)

Query: 1 LDWILTYC 8
L W L YC
Sbjct: 863 LAWYLVYC 870


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 3 WILTYCS 9
W+LT C+
Sbjct: 1503 WLLTLCA 1509


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 WILTYCSS 10
W+L YC++
Sbjct: 3285 WMLYYCNA 3292


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 WILTYCSS 10
W+L YC++
Sbjct: 3283 WMLYYCNA 3290


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 3 WILTYCSS 10
W+L YC++
Sbjct: 3283 WMLYYCNA 3290


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 WILTYCSS 10
W+L YC++
Sbjct: 3285 WMLYYCNA 3292


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 WILTYCSS 10
W+L YC++
Sbjct: 3283 WMLYYCNA 3290


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 3 WILTYCSS 10
W+L YC++
Sbjct: 3283 WMLYYCNA 3290


>sp|L_RYSV|RNA-DIRECTED RNA polymerase L|Rice yellow stunt virus (RYSV)

Query: 1 LDWILTYC 8
L WI+ YC
Sbjct: 849 LGWIILYC 856


>sp|CAPSD_REOVJ|INNER capsid protein lambda-1|Reovirus type 2 (strain D5/Jones)

Query: 1 LDWILTYCS 9
++W LT C+
Sbjct: 479 IEWALTECA 487


>sp|CAPSD_REOVL|INNER capsid protein lambda-1|Reovirus type 1 (strain Lang)

Query: 1 LDWILTYCS 9
++W LT C+
Sbjct: 479 IEWALTECA 487


>sp|CAPSD_REOVD|INNER capsid protein lambda-1|Reovirus type 3 (strain Dearing)

Query: 1 LDWILTYCS 9
++W LT C+
Sbjct: 479 IEWALTECA 487


>sp|VE7_HPV52|PROTEIN E7|Human papillomavirus 52

Query: 3 WILTYCSS 10
+I+TYC S
Sbjct: 55 YIVTYCHS 62




106|SequenceR|535|526|GWDMKLDWIL

>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1 GWDMKLDW 8
WDM L+W
Sbjct: 319 AWDMMLNW 326


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 GWDMKLDW 8
WDM L+W
Sbjct: 319 AWDMMLNW 326


>sp|VG18_BPP22|DNA replication protein gp18|Salmonella phage P22 (Bacteriophage P22)

Query: 1 GWDMKLDWI 9
G++ K+DWI
Sbjct: 61 GYNKKIDWI 69


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 1 GWDMKLDW 8
WDM L+W
Sbjct: 319 AWDMMLNW 326


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 320 AWDMMMNW 327


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1 GWDMKLDW 8
WDM L W
Sbjct: 319 AWDMMLSW 326


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|P3_BPPH6|SPIKE protein P3|Pseudomonas phage phi6 (Bacteriophage phi-6)

Query: 1 GWDMKLDW 8
GW +K+DW
Sbjct: 183 GWYVKMDW 190


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|RDRP_AQRVC|RNA-DIRECTED RNA polymerase VP2|Aquareovirus C (isolate Golden

Query: 1 GWDMKLDW 8
GW+ +DW
Sbjct: 774 GWNYDIDW 781


>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 203 AWDMMMNW 210


>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 191 AWDMMMNW 198


>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 203 AWDMMMNW 210


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1 GWDMKLDW 8
WDM + W
Sbjct: 319 AWDMMMSW 326


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1 GWDMKLDW 8
WDM + W
Sbjct: 319 AWDMMMKW 326


>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 WDMKLDWIL 10
W + LDW +
Sbjct: 93 WRLDLDWTI 101


>sp|DPOL_ASFM2|DNA polymerase beta|African swine fever virus (isolate

Query: 2 WDMKLDWIL 10
W+ KLD IL
Sbjct: 321 WNQKLDTIL 329


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 1 GWDMKLDW 8
WDM ++W
Sbjct: 319 AWDMMMNW 326


>sp|FIB11_BPE32|PROBABLE tail fiber protein|Escherichia phage Phieco32 (Escherichia coli

Query: 2 WDMKLD 7
WD KLD
Sbjct: 495 WDFKLD 500


>sp|FIB12_BPPZA|PRENECK appendage protein|Bacillus phage PZA (Bacteriophage PZA)

Query: 2 WDMKLDWIL 10
W+ ++WIL
Sbjct: 60 WNKVMEWIL 68


>sp|FIB12_BPPH2|PRE-NECK appendage protein|Bacillus phage phi29 (Bacteriophage phi-29)

Query: 2 WDMKLDWIL 10
W+ ++WIL
Sbjct: 60 WNKVMEWIL 68


>sp|FIB12_BPB03|PRE-NECK appendage protein|Bacillus phage B103 (Bacteriophage B103)

Query: 2 WDMKLDWIL 10
W+ ++WIL
Sbjct: 59 WNKVMEWIL 67


>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 DMKLDW 8
DM++DW
Sbjct: 555 DMEIDW 560


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 2 WDMKLDWIL 10
W + DW+L
Sbjct: 89 WTLVTDWLL 97


>sp|RBP_BPLSK|RECEPTOR binding protein|Lactococcus phage SK1 (Lactococcus lactis

Query: 1 GWDMKLDWI 9
GW+M W+
Sbjct: 200 GWNMSGTWV 208


>sp|PHOSP_MMVR|PHOSPHOPROTEIN mosaic virus (isolate Maize/United

Query: 1 GWDMKLDWI 9
GW + LD+I
Sbjct: 219 GWGLYLDFI 227


>sp|RBP_BPLP2|RECEPTOR binding protein|Lactococcus phage p2 (Lactococcus lactis

Query: 1 GWDMKLDWI 9
GW+M W+
Sbjct: 200 GWNMSGTWV 208


>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 WDMKLDWIL 10
W++ L WI+
Sbjct: 130 WELVLPWIV 138


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 WDMKLDWIL 10
W++ L WI+
Sbjct: 130 WELVLPWIV 138


>sp|PORTL_GAHVM|PORTAL protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 DMKLDWI 9
D+K DWI
Sbjct: 103 DLKNDWI 109


>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)

Query: 2 WDMKLDWI 9
W+++ DW+
Sbjct: 18 WELEEDWV 25


>sp|BP25_BPT4|BASEPLATE wedge protein gp25|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 DMKLDW 8
+MK+DW
Sbjct: 14 EMKMDW 19


>sp|RDF_BPPHC|RECOMBINATION directionality factor|Streptomyces phage phiC31 (Bacteriophage

Query: 2 WDMKLDWI 9
WDMKL W+
Sbjct: 103 WDMKL-WL 109


>sp|Y071_OSHVF|UNCHARACTERIZED protein ORF71|Ostreid herpesvirus 1 (isolate France)

Query: 2 WDMKLDW 8
+DM LDW
Sbjct: 162 FDMVLDW 168


>sp|RDRP_AQRVG|RNA-DIRECTED RNA polymerase VP2|Aquareovirus G (isolate American grass

Query: 1 GWDMKLDW 8
GW +DW
Sbjct: 774 GWVYDIDW 781


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 WDMKLDWIL 10
W+ DWIL
Sbjct: 1833 WNTGHDWIL 1841


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2 WDMKLDWIL 10
W+ DWIL
Sbjct: 1833 WNTGHDWIL 1841


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2 WDMKLDWIL 10
W+ DWIL
Sbjct: 1833 WNTGHDWIL 1841


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2 WDMKLDWIL 10
W+ DWIL
Sbjct: 1833 WNTGHDWIL 1841


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2 WDMKLDWIL 10
W+ DWIL
Sbjct: 1833 WNTGHDWIL 1841


>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)

Query: 2 WDMKLDWIL 10
WD K D+I+
Sbjct: 414 WDTKKDYII 422


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2 WDMKLDWIL 10
W+ DWIL
Sbjct: 1833 WNTGHDWIL 1841


>sp|DPOZ_BPVC8|DNA polymerase DpoZ|Vibrio phage phiVC8

Query: 4 MKLDW 8
MKLDW
Sbjct: 1 MKLDW 5




107|SequenceR|540|531|NKDFLGWDMK

>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 3 DFLGWD 8
DF+GWD
Sbjct: 711 DFVGWD 716


>sp|CAPSD_GLVWB|MAJOR capsid protein|Giardia lamblia virus (isolate Wang)

Query: 3 DFLGWD 8
DF+GWD
Sbjct: 711 DFVGWD 716


>sp|RIR1_ALHV1|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Alcelaphine herpesvirus 1 (strain C500)

Query: 6 GWDMK 10
GWDMK
Sbjct: 20 GWDMK 24


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 2 KDFLGW 7
+DFLGW
Sbjct: 148 EDFLGW 153


Query: 1 NKDFLGW 7
N DF GW
Sbjct: 369 NCDFYGW 375


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 2 KDFLGW 7
+DFLGW
Sbjct: 148 EDFLGW 153


Query: 1 NKDFLGW 7
N DF GW
Sbjct: 369 NCDFYGW 375


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 2 KDFLGW 7
+DFLGW
Sbjct: 148 EDFLGW 153


Query: 1 NKDFLGW 7
N DF GW
Sbjct: 369 NCDFYGW 375


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 2 KDFLGW 7
+DFLGW
Sbjct: 148 EDFLGW 153


Query: 1 NKDFLGW 7
N DF GW
Sbjct: 369 NCDFYGW 375


>sp|TSP_BPP2|TAIL sheath protein|Escherichia phage P2 (Bacteriophage P2)

Query: 3 DFLGWD 8
DFL WD
Sbjct: 191 DFLAWD 196


>sp|53DR_BPSPB|5'(3')-DEOXYRIBONUCLEOTIDASE phage SPbeta (Bacillus phage

Query: 2 KDFLGWDMK 10
KD L WD+K
Sbjct: 35 KDILCWDIK 43


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 1 NKDFLGWDMK 10
N DF+ W+++
Sbjct: 600 NLDFIKWNLQ 609


>sp|RPC_BP163|REPRESSOR protein C|Rhizobium phage 16-3 (Bacteriophage 16-3)

Query: 2 KDFLGW 7
K+F+GW
Sbjct: 222 KEFVGW 227


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 NKDFLGW 7
N DF GW
Sbjct: 369 NCDFYGW 375


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 NKDFLGW 7
N DF GW
Sbjct: 369 NCDFYGW 375


>sp|VF467_IIV6|UNCHARACTERIZED protein 467R|Invertebrate iridescent virus 6 (IIV-6)

Query: 4 FLGWD 8
F+GWD
Sbjct: 414 FIGWD 418


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3025 NYLGWHLK 3032


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3027 NYLGWHLK 3034


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3027 NYLGWHLK 3034


>sp|NCTSP_BPN4|NON-CONTRACTILE tail sheath|Enterobacteria phage N4 (Bacteriophage N4)

Query: 1 NKDFLG 6
NKDFLG
Sbjct: 93 NKDFLG 98


>sp|VP3_FDVS|PUTATIVE structural protein VP3|Fiji disease virus (isolate Sugarcane)

Query: 3 DFLGWD 8
DF+GW+
Sbjct: 341 DFIGWN 346


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3025 NYLGWHLK 3032


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3025 NYLGWHLK 3032


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3025 NYLGWHLK 3032


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3025 NYLGWHLK 3032


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3023 NYLGWHLK 3030


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 3 DFLGWDMK 10
++LGW +K
Sbjct: 3025 NYLGWHLK 3032




108|SequenceR|545|536|TNEGANKDFL

>sp|MVP_OLV2I|MOVEMENT protein|Olive latent virus 2 (isolate

Query: 3 EGANKDFL 10
EGAN +FL
Sbjct: 317 EGANHEFL 324


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 1 TNEGANKDFL 10
T G+N++FL
Sbjct: 24 TGRGSNREFL 33


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain

Query: 1 TNEGANKDFL 10
T G+N++FL
Sbjct: 24 TGRGSNREFL 33


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 TNEGANKDFL 10
TNEG +FL
Sbjct: 427 TNEGRQANFL 436


>sp|FIB11_BPE32|PROBABLE tail fiber protein|Escherichia phage Phieco32 (Escherichia coli

Query: 3 EGANKDFL 10
EGA+KDF+
Sbjct: 58 EGASKDFV 65


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1 TNEGANKDFL 10
TNEG +FL
Sbjct: 427 TNEGRQANFL 436




109|SequenceR|550|541|EERLFTNEGA

>sp|VP1_POVMK|MAJOR capsid protein VP1|Murine polyomavirus (strain Kilham) (MPyV)

Query: 2 ERLFTNEGA 10
+RL+ NEGA
Sbjct: 131 KRLYDNEGA 139


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 EERLFTNEGA 10
++RLF EGA
Sbjct: 1802 QDRLFLGEGA 1811


>sp|L_SENDO|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Ohita) (SeV)

Query: 1 EERLFTNEGA 10
++RLF EGA
Sbjct: 1798 KDRLFLGEGA 1807


>sp|L_SENDA|RNA-DIRECTED RNA polymerase L|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 EERLFTNEGA 10
++RLF EGA
Sbjct: 1798 KDRLFLGEGA 1807


>sp|SPIKE_ADEB3|FIBER protein|Bovine adenovirus B serotype 3

Query: 1 EERLFTNEGA 10
EERL N GA
Sbjct: 167 EERLTVNTGA 176


>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 3 RLFTNEGA 10
R FT+EGA
Sbjct: 148 RAFTDEGA 155




110|SequenceR|555|546|QPYVIEERLF

>sp|MVP_MMVR|PUTATIVE movement protein 3|Maize mosaic virus (isolate Maize/United

Query: 2 PYVIEERL 9
PYV+E R+
Sbjct: 115 PYVVEGRI 122


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 2 PYVIEERLF 10
PYV+ ++LF
Sbjct: 2121 PYVMADQLF 2129




111|SequenceR|560|551|YYYAKQPYVI

>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 YYYAKQPY 8
++ AKQPY
Sbjct: 1063 FFIAKQPY 1070


>sp|VP74_NPVOP|PROTEIN p74|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 YYYAKQPY 8
YY K+PY
Sbjct: 627 YYLVKEPY 634


>sp|VP74_NPVCF|PROTEIN p74|Choristoneura fumiferana nuclear polyhedrosis virus

Query: 1 YYYAKQPY 8
YY K+PY
Sbjct: 628 YYLVKEPY 635


>sp|BP27_BPKVM|PROBABLE baseplate hub protein gp334|Vibrio phage KVP40 (isolate Vibrio

Query: 3 YAKQPYV 9
Y K+PYV
Sbjct: 122 YVKRPYV 128




112|SequenceR|565|556|EIIACYYYAK

>sp|NS2_MPRVN|PUTATIVE non-structural protein 2|Micromonas pusilla reovirus (isolate

Query: 5 CYYYAK 10
CYY+AK
Sbjct: 399 CYYFAK 404


>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 EIIACYYY 8
E++AC YY
Sbjct: 463 ELMACSYY 470


>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 EIIACYYY 8
E++AC YY
Sbjct: 463 ELMACSYY 470


>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 254 ACFFYAR 260


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 246 ACFFYAR 252


>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 243 ACFFYAR 249


>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 245 ACFFYAR 251


>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 245 ACFFYAR 251


>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 244 ACFFYAR 250


>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5

Query: 4 ACYYYAK 10
AC++YA+
Sbjct: 245 ACFFYAR 251


>sp|NSP1_ROTPG|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/United

Query: 4 ACYYYAK 10
ACYYY +
Sbjct: 7 ACYYYKR 13


>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United

Query: 4 ACYYYAK 10
ACYYY +
Sbjct: 7 ACYYYKR 13


>sp|NSP1_ROTP5|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Pig/United

Query: 4 ACYYYAK 10
ACYYY +
Sbjct: 7 ACYYYKR 13


>sp|POLG_HAVS2|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1226 EPVVCYLYGK 1235


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 EIIACYYYAK 10
E + CY Y K
Sbjct: 1222 EPVVCYLYGK 1231


>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 4 ACYYYAK 10
ACYYY +
Sbjct: 7 ACYYYKR 13


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 4 ACYYYAK 10
ACYYY +
Sbjct: 7 ACYYYKR 13


>sp|CAPSD_FXMV|COAT protein|Foxtail mosaic virus

Query: 5 CYYYAK 10
CY+Y K
Sbjct: 104 CYFYTK 109


>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1 EIIACYYY 8
++I CYY+
Sbjct: 105 KLIHCYYF 112




113|SequenceR|570|561|RLIVDEIIAC

>sp|SSB_BPT7|SINGLE-STRANDED DNA-binding protein|Escherichia phage T7 (Bacteriophage T7)

Query: 3 IVDEIIAC 10
+VDEI+ C
Sbjct: 54 MVDEIVKC 61


>sp|062L_IIV6|UNCHARACTERIZED protein 062L|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 RLIVDEIIAC 10
++I+DE+I C
Sbjct: 116 KIIIDELIDC 125


>sp|RPOL_BPT3|DNA-DIRECTED RNA polymerase|Enterobacteria phage T3 (Bacteriophage T3)

Query: 4 VDEIIAC 10
VD+I+AC
Sbjct: 487 VDDILAC 493


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 LIVDEIIAC 10
L+VDE+ C
Sbjct: 5681 LVVDEVSMC 5689


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 2 LIVDEIIAC 10
L+VDE+ C
Sbjct: 5536 LVVDEVSMC 5544


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 2 LIVDEIIAC 10
L+VDE+ C
Sbjct: 5772 LVVDEVSMC 5780


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 2 LIVDEIIAC 10
L+VDE+ C
Sbjct: 5725 LVVDEVSMC 5733


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 2 LIVDEIIAC 10
L+VDE+ C
Sbjct: 5732 LVVDEVSMC 5740




114|SequenceR|575|566|ITWAFRLIVD

>sp|MCE_WTV|PUTATIVE mRNA-capping enzyme P5|Wound tumor virus (WTV)

Query: 1 ITWAFR 6
ITWAFR
Sbjct: 109 ITWAFR 114


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 WAFRLIV 9
W+FRL+V
Sbjct: 2351 WSFRLLV 2357


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3 WAFRLIV 9
W+FRL+V
Sbjct: 2351 WSFRLLV 2357


>sp|P3_RGDV|OUTER capsid protein P3|Rice gall dwarf virus (RGDV)

Query: 1 ITWAFRLIVD 10
+ W +R+++D
Sbjct: 629 LNWKYRVVID 638


>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)

Query: 2 TWAFRLIV 9
+WA+RL V
Sbjct: 296 SWAYRLAV 303




115|SequenceR|580|571|TISIQITWAF

>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 TISIQITW 8
TISI++ W
Sbjct: 1017 TISIRVPW 1024




116|SequenceR|585|576|LLTTSTISIQ

***** No hits found ******


117|SequenceR|590|581|DGSHPLLTTS

>sp|Y003_OSHVF|UNCHARACTERIZED protein ORF3|Ostreid herpesvirus 1 (isolate France)

Query: 1 DGSHPLLT 8
DGS P++T
Sbjct: 129 DGSQPMIT 136


>sp|YL442_MIMIV|UNCHARACTERIZED protein L442|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DGSHPLLT 8
DGSH L+T
Sbjct: 447 DGSHKLIT 454


>sp|UNG_EHV1V|URACIL-DNA glycosylase|Equine herpesvirus 1 (strain V592)

Query: 3 SHPLLTTS 10
+HPL TTS
Sbjct: 74 THPLFTTS 81


>sp|UNG_EHV1B|URACIL-DNA glycosylase|Equine herpesvirus 1 (strain Ab4p)

Query: 3 SHPLLTTS 10
+HPL TTS
Sbjct: 74 THPLFTTS 81


>sp|NS1_LDCPR|NON-STRUCTURAL protein 1|Lymantria dispar cypovirus 1 (isolate

Query: 2 GSHPLLTTS 10
G+H +LTTS
Sbjct: 612 GTHIILTTS 620


>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 SHPLLTTS 10
SHPLLT
Sbjct: 46 SHPLLTAQ 53


>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 SHPLLTTS 10
SHPLLT
Sbjct: 46 SHPLLTAQ 53


>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 SHPLLTTS 10
SHPLLT
Sbjct: 46 SHPLLTAQ 53


>sp|089R_FRG3G|UNCHARACTERIZED protein 89R|Frog virus 3 (isolate Goorha)

Query: 1 DGSHPLL 7
+GSHPL+
Sbjct: 161 EGSHPLV 167




118|SequenceR|595|586|VTAIIDGSHP

>sp|CEP2_PSHV1|CYTOPLASMIC envelopment protein 2|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 VTAIIDGSH 9
+TA+++G+H
Sbjct: 87 ITAVVNGAH 95


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 VTAIIDG 7
VTA+IDG
Sbjct: 2363 VTAVIDG 2369


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 VTAIIDG 7
VTA+IDG
Sbjct: 2363 VTAVIDG 2369


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 VTAIIDG 7
VTA+IDG
Sbjct: 2363 VTAVIDG 2369


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 VTAIIDG 7
VTA+IDG
Sbjct: 2363 VTAVIDG 2369


>sp|RDRP_AHSV|RNA-DIRECTED RNA polymerase|African horse sickness virus (AHSV)

Query: 3 AIIDGSHP 10
A+ DG HP
Sbjct: 117 AVYDGVHP 124


>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)

Query: 1 VTAIIDGSHP 10
VTAI+D +P
Sbjct: 557 VTAILDPENP 566


>sp|GLYCO_VHSV0|SPIKE glycoprotein|Viral hemorrhagic septicemia virus (strain

Query: 1 VTAIIDGSHP 10
V AI+ G HP
Sbjct: 235 VKAIVAGHHP 244




119|SequenceR|600|591|ELPAFVTAII

>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 ELPAFVTA 8
ELPAF TA
Sbjct: 509 ELPAFTTA 516


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 ELPAFVTA 8
ELPAF TA
Sbjct: 509 ELPAFTTA 516


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 1 ELPAFVTA 8
ELPAF TA
Sbjct: 509 ELPAFTTA 516


>sp|POLG_EBHSG|GENOME polyprotein|European brown hare syndrome virus

Query: 1 ELPAFVTAII 10
+LP F+T +I
Sbjct: 307 DLPGFLTTLI 316




120|SequenceR|605|596|FRRFVELPAF

>sp|CAPSD_NCBVS|CAPSID protein|Nudaurelia capensis beta virus (isolate

Query: 1 FRRFVELPA 9
FRRF +PA
Sbjct: 489 FRRFEAIPA 497


>sp|CAPSD_AHEV|PRO-SECRETED protein ORF2|Avian hepatitis E virus (isolate

Query: 3 RFVELPAF 10
RF LPAF
Sbjct: 485 RFAALPAF 492


>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 2 RRFVELP 8
R FVELP
Sbjct: 570 RHFVELP 576


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 2 RRFVELP 8
R FVELP
Sbjct: 570 RHFVELP 576


>sp|PP220_ASFK5|POLYPROTEIN pp220|African swine fever virus (isolate

Query: 1 FRRFVELPA 9
F RFV +PA
Sbjct: 1274 FTRFVGIPA 1282


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 4 FVELPAF 10
F++LPAF
Sbjct: 1323 FIDLPAF 1329


>sp|GP28_BPT4|BASEPLATE hub assembly protein gp28|Enterobacteria phage T4 (Bacteriophage

Query: 4 FVELPAF 10
F+E+PAF
Sbjct: 139 FLEMPAF 145


>sp|RDRP_CLBVS|RNA replication polyprotein|Citrus leaf blotch virus (isolate

Query: 1 FRRFVELPAF 10
F RF ++P F
Sbjct: 1307 FNRFFDVPCF 1316




121|SequenceR|610|601|FFNWVFRRFV

>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1 FFNWVFRRFV 10
FFNW RF+
Sbjct: 185 FFNWCEPRFI 194


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 FFNWVFRRFV 10
FFNW RF+
Sbjct: 167 FFNWCEPRFI 176


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1 FFNWVFRRF 9
FFNW+ +R
Sbjct: 751 FFNWMHKRL 759


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 FFNWVFRRF 9
FFNW+ +R
Sbjct: 751 FFNWMHKRL 759


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 FFNWVFRRF 9
FF W+ RR
Sbjct: 692 FFQWLHRRL 700


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 FFNWVFRRF 9
FF W+ RR
Sbjct: 692 FFQWLHRRL 700


>sp|EXLYS_BPDPK|PEPTIDOGLYCAN hydrolase gp181|Pseudomonas phage phiKZ

Query: 3 NWVFRRFV 10
+W++RRF+
Sbjct: 1676 DWLYRRFL 1683


>sp|VL2_PAPVE|MINOR capsid protein L2|European elk papillomavirus (EEPV)

Query: 2 FNWVFRRF 9
FNW RR+
Sbjct: 244 FNWFSRRY 251


>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 1 FFNWVFRRFV 10
FF+W+F V
Sbjct: 198 FFDWLFMAVV 207


>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|POLG_FMDVZ|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDVO|GENOME polyprotein|Foot-and-mouth disease virus serotype O

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDVI|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDVC|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDVA|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDV5|GENOME polyprotein|Foot-and-mouth disease virus (isolate

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDV1|GENOME polyprotein|Foot-and-mouth disease virus (strain A10/Holland/1961

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 65 FFDWVY 70


>sp|POLG_FMDA1|GENOME polyprotein|Foot-and-mouth disease virus serotype Asia-1

Query: 1 FFNWVF 6
FF+WV+
Sbjct: 67 FFDWVY 72


>sp|M2_I97A1|MATRIX protein 2|Influenza A virus (strain A/Hong

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I97A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|M2_I33A0|MATRIX protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 1 FFNWVFRRF 9
FF ++RRF
Sbjct: 47 FFKCIYRRF 55


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3 NWVFR 7
NW+FR
Sbjct: 249 NWIFR 253


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3 NWVFR 7
NW+FR
Sbjct: 249 NWIFR 253


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3 NWVFR 7
NW+FR
Sbjct: 249 NWIFR 253


>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 1 FFNWVFRRF 9
FF+W+F +
Sbjct: 513 FFSWLFSLY 521


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 1 FFNWVFRRFV 10
FF+W+F V
Sbjct: 198 FFDWLFMAVV 207


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 1 FFNWVFR 7
+F+WV+R
Sbjct: 744 WFHWVYR 750




122|SequenceR|615|606|ENELRFFNWV

>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 1 ENELRFFNW 9
EN RFF W
Sbjct: 1043 ENYFRFFMW 1051


>sp|MATRX_MMVR|MATRIX protein|Maize mosaic virus (isolate Maize/United

Query: 1 ENELRFFN 8
EN++RF+N
Sbjct: 107 ENQVRFYN 114


>sp|UL13_GAHVM|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 3 ELRFFNW 9
E RF+NW
Sbjct: 31 EERFYNW 37


>sp|MVP_ZYMVS|P3N-PIPO polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 ENELRFFN 8
+NE++FFN
Sbjct: 316 QNEVQFFN 323


>sp|TMP_BPLC2|PROBABLE tape measure protein|Lactococcus phage c2

Query: 4 LRFFNW 9
+RF+NW
Sbjct: 549 VRFYNW 554


>sp|POL1_APMV|RNA1 polyprotein|Andean potato mottle virus (APMV)

Query: 3 ELRFFNW 9
+LR+F+W
Sbjct: 599 DLRYFDW 605


>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain

Query: 1 ENELRFFN 8
+NE++FFN
Sbjct: 316 QNEVQFFN 323


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2 NELRFFNWV 10
N RF NW+
Sbjct: 391 NMTRFLNWI 399


>sp|VP2_RRSVT|OUTER capsid protein VP2|Rice ragged stunt virus (isolate

Query: 3 ELRFFNWV 10
E ++FNW+
Sbjct: 941 ENKYFNWL 948


>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU

Query: 2 NELRFFNW 9
+EL+ FNW
Sbjct: 1871 SELKKFNW 1878




123|SequenceR|620|611|CNNLHENELR

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT)

Query: 1 CNNLHENEL 9
C NLH+ EL
Sbjct: 524 CGNLHQREL 532


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 3 NLHENELR 10
N H NELR
Sbjct: 976 NTHTNELR 983


>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12

Query: 4 LHENELR 10
LHE ELR
Sbjct: 281 LHETELR 287


>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 3 NLHENELR 10
+LHENE++
Sbjct: 952 SLHENEIQ 959


>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 CNNLHENELR 10
C+N + NE++
Sbjct: 10 CSNAYANEMK 19


>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 CNNLHENELR 10
C+N + NE++
Sbjct: 10 CSNAYANEMK 19




124|SequenceR|625|616|ARFEGCNNLH

>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 2 RFEGCNNLH 10
RF+GCN+ +
Sbjct: 226 RFQGCNHFN 234


>sp|RDRP_NCBVS|METHYLTRANSFERASE/HELICASE/RNA-DIRECTED RNA polymerase|Nudaurelia capensis beta virus (isolate

Query: 4 EGCNNL 9
EGCNN+
Sbjct: 554 EGCNNI 559


>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus

Query: 4 EGCNNLH 10
E CNN+H
Sbjct: 229 EMCNNIH 235


>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)

Query: 4 EGCNNLH 10
E CNN+H
Sbjct: 229 EMCNNIH 235


>sp|B19_VACCW|ANKYRIN repeat protein B19|Vaccinia virus (strain Western Reserve)

Query: 4 EGCNNLH 10
E CNN+H
Sbjct: 229 EMCNNIH 235


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 1 ARFEGCNN 8
+ +EGC+N
Sbjct: 949 SNYEGCDN 956


>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 EGCNNLH 10
E CNN+H
Sbjct: 229 EMCNNIH 235


>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)

Query: 4 EGCNNLH 10
E CNN+H
Sbjct: 229 EMCNNIH 235


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 6 CNNLH 10
CNN+H
Sbjct: 312 CNNMH 316


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 6 CNNLH 10
CNN+H
Sbjct: 312 CNNMH 316


>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain

Query: 5 GCNNL 9
GCNNL
Sbjct: 167 GCNNL 171


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 5 GCNNL 9
GCNNL
Sbjct: 167 GCNNL 171


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)

Query: 6 CNNLH 10
CNN+H
Sbjct: 312 CNNMH 316


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 6 CNNLH 10
CNN+H
Sbjct: 312 CNNMH 316


>sp|DNMK_BPT5|DEOXYNUCLEOSIDE-5'-MONOPHOSPHATE kinase|Escherichia phage T5 (Enterobacteria phage

Query: 2 RFEGCNNL 9
+F+G NNL
Sbjct: 226 KFDGINNL 233


>sp|RDRP_PRV|RNA-DIRECTED RNA polymerase|Pieris rapae virus

Query: 6 CNNLH 10
CNN+H
Sbjct: 140 CNNIH 144




125|SequenceR|630|621|SIDRVARFEG

>sp|ENV_SIVTN|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate TAN1)

Query: 1 SIDRVARFEG 10
+IDR+A F G
Sbjct: 829 AIDRLANFTG 838


>sp|G3P_BPM13|ATTACHMENT protein G3P|Enterobacteria phage M13 (Bacteriophage M13)

Query: 1 SIDRVARFEG 10
++DR A +EG
Sbjct: 44 TLDRYANYEG 53


>sp|G3P_BPFD|ATTACHMENT protein G3P|Enterobacteria phage fd (Bacteriophage fd)

Query: 1 SIDRVARFEG 10
++DR A +EG
Sbjct: 44 TLDRYANYEG 53


>sp|G3P_BPF1|ATTACHMENT protein G3P|Enterobacteria phage f1 (Bacteriophage f1)

Query: 1 SIDRVARFEG 10
++DR A +EG
Sbjct: 44 TLDRYANYEG 53




126|SequenceR|635|626|NLPAVSIDRV

>sp|FUS_CDVO|FUSION glycoprotein F0|Canine distemper virus (strain Onderstepoort)

Query: 3 PAVSIDRV 10
PA+S+DR+
Sbjct: 562 PAISLDRL 569


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 NLPAVSID 8
N+P++S+D
Sbjct: 1880 NIPSISLD 1887


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 NLPAVSID 8
N+P++S+D
Sbjct: 1880 NIPSISLD 1887


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 NLPAVSID 8
N+P++S+D
Sbjct: 1880 NIPSISLD 1887


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 NLPAVSID 8
N+P++S+D
Sbjct: 1880 NIPSISLD 1887




127|SequenceR|640|631|TQDDANLPAV

>sp|RDRP_OLV2I|RNA-DIRECTED RNA polymerase 2a|Olive latent virus 2 (isolate

Query: 1 TQDDANLPAV 10
TQ DAN+P+V
Sbjct: 30 TQCDANVPSV 39


>sp|VF354_ASFWA|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 QDDANLPA 9
QDD +LPA
Sbjct: 239 QDDTDLPA 246


>sp|VF354_ASFP4|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 QDDANLPA 9
QDD +LPA
Sbjct: 239 QDDTDLPA 246


>sp|VF354_ASFM2|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 QDDANLPA 9
QDD +LPA
Sbjct: 239 QDDTDLPA 246


>sp|VF354_ASFK5|UNCHARACTERIZED protein B354L|African swine fever virus (isolate

Query: 2 QDDANLPA 9
QDD +LPA
Sbjct: 239 QDDTDLPA 246


>sp|VF354_ASFB7|UNCHARACTERIZED protein B354L|African swine fever virus (strain

Query: 2 QDDANLPA 9
QDD +LPA
Sbjct: 239 QDDTDLPA 246




128|SequenceR|645|636|MQELLTQDDA

>sp|TUBE_BPT5|TAIL tube protein pb6|Escherichia phage T5 (Enterobacteria phage

Query: 2 QELLTQDD 9
QE+L QDD
Sbjct: 26 QEILVQDD 33




129|SequenceR|650|641|DDQDMMQELL

>sp|IE63_EHV2|IMMEDIATE-EARLY phosphoprotein 57|Equine herpesvirus 2 (strain 86/87)

Query: 1 DDQDMMQELL 10
+DQDM+ +LL
Sbjct: 7 EDQDMLDQLL 16


>sp|NPH2_FOWPN|RNA helicase NPH-II|Fowlpox virus (strain NVSL) (FPV)

Query: 1 DDQDMMQELL 10
DD+D +QE L
Sbjct: 338 DDRDRLQEFL 347


>sp|POLS_IPNVN|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 DQDMMQEL 9
DQD MQ+L
Sbjct: 922 DQDQMQDL 929


>sp|POLS_IPNVJ|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 DQDMMQEL 9
DQD MQ+L
Sbjct: 922 DQDQMQDL 929


>sp|POLS_IPNVS|STRUCTURAL polyprotein|Infectious pancreatic necrosis virus (strain

Query: 2 DQDMMQEL 9
DQD MQ+L
Sbjct: 922 DQDQMQDL 929




130|SequenceR|655|646|RNRVGDDQDM

***** No hits found ******


131|SequenceR|660|651|SRNKQRNRVG

>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3

Query: 3 NKQRNRVG 10
N QRN+VG
Sbjct: 301 NPQRNKVG 308




132|SequenceR|665|656|QNYKWSRNKQ

>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 3 YKWSRNK 9
YKW+RNK
Sbjct: 315 YKWTRNK 321


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 3 YKWSRNK 9
YKW+RNK
Sbjct: 309 YKWTRNK 315


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 3 YKWSRNK 9
YKW+R K
Sbjct: 308 YKWTRTK 314


>sp|OBP_EHV1V|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain V592)

Query: 4 KWSRN 8
KWSRN
Sbjct: 843 KWSRN 847


>sp|OBP_EHV1B|REPLICATION origin-binding protein|Equine herpesvirus 1 (strain Ab4p)

Query: 4 KWSRN 8
KWSRN
Sbjct: 843 KWSRN 847


>sp|TERL_BPT5|TERMINASE, large subunit|Escherichia phage T5 (Enterobacteria phage

Query: 1 QNYKW 5
QNYKW
Sbjct: 397 QNYKW 401


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 3 YKWSRNK 9
+KW RNK
Sbjct: 272 FKWVRNK 278


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 4 KWSRNKQ 10
KW+ NKQ
Sbjct: 1113 KWNTNKQ 1119


>sp|MATRX_SVCV|MATRIX protein|Spring viremia of carp virus

Query: 2 NYKWSRNKQ 10
+YK SRNK+
Sbjct: 74 DYKGSRNKR 82


>sp|VC13_SWPVK|PROTEIN C13|Swinepox virus (strain Kasza) (SWPV)

Query: 4 KWSRNKQ 10
KWSR+K+
Sbjct: 190 KWSRHKK 196


>sp|NS12_CVP67|NON-STRUCTURAL protein of 12.7 kDa|Porcine hemagglutinating encephalomyelitis

Query: 2 NYKWSRNK 9
NY W RN+
Sbjct: 43 NYAWCRNQ 50


>sp|NS12_CVPIA|NON-STRUCTURAL protein of 12.7 kDa|Porcine hemagglutinating encephalomyelitis

Query: 2 NYKWSRNK 9
NY W RN+
Sbjct: 43 NYAWCRNQ 50


>sp|CAPSD_TRSV|CAPSID protein|Tobacco ringspot virus (TobRV) (TRSV)

Query: 5 WSRNKQ 10
WSR+KQ
Sbjct: 419 WSRSKQ 424




133|SequenceR|670|661|RLSISQNYKW

>sp|MVP_SHMV|MOVEMENT protein|Sunn-hemp mosaic virus (SHMV) (TMV

Query: 1 RLSISQNYKW 10
+LS+S +KW
Sbjct: 18 KLSVSDKFKW 27


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 5 SQNYKW 10
S+NY+W
Sbjct: 562 SKNYRW 567


>sp|RDRP_LOLV|RNA-DIRECTED RNA polymerase|Lolium latent virus (isolate Lolium/USA/US1/-)

Query: 3 SISQNYKW 10
S SQN KW
Sbjct: 300 SYSQNGKW 307




134|SequenceR|675|666|ALRPRRLSIS

***** No hits found ******


135|SequenceR|680|671|AKSQSALRPR

***** No hits found ******


136|SequenceR|685|676|VKTDRAKSQS

***** No hits found ******


137|SequenceR|690|681|TDEILVKTDR

>sp|GE_GAHVM|ENVELOPE glycoprotein E|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 DEILVKTDR 10
DEI+++TD+
Sbjct: 89 DEIVLRTDK 97


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 DEILVKTDR 10
D+ILV +DR
Sbjct: 794 DDILVASDR 802


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 1 TDEILVKTDR 10
TDE L KT+R
Sbjct: 211 TDEELGKTER 220




138|SequenceR|696|686|TNAEDDTDEIL

>sp|POL2_GFLVN|RNA2 polyprotein|Grapevine fanleaf virus (isolate NW)

Query: 1 TNAEDDTDEIL 11
TNA DTD +L
Sbjct: 479 TNATVDTDSVL 489


>sp|POL2_GFLV|RNA2 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 1 TNAEDDTDEIL 11
TNA DTD +L
Sbjct: 478 TNATVDTDSVL 488


>sp|POL2_ARMVN|RNA2 polyprotein|Arabis mosaic virus (isolate NW)

Query: 1 TNAEDDTDEIL 11
TNA D D IL
Sbjct: 480 TNATVDADSIL 490


>sp|ENV_JEMBR|ENVELOPE glycoprotein|Jembrana disease virus (JDV)

Query: 2 NAEDDTD 8
NA++DTD
Sbjct: 631 NAQEDTD 637


>sp|VFD38_ASFB7|UNCHARACTERIZED protein DP238L|African swine fever virus (strain

Query: 3 AEDDTDEIL 11
+EDDTD I+
Sbjct: 200 SEDDTDSIV 208




THE END