S20A2_HUMAN Blast Output
Viruses
1|Sequence|1|10|MAMDEYLWMV

>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 1 MAMDEYLW 8
M+M E++W
Sbjct: 452 MSMSEWIW 459


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 4 DEYLWMV 10
D Y WMV
Sbjct: 699 DSYQWMV 705


>sp|CAPSH_ADES1|HEXON protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 MDEYLWMV 10
+D YLW +
Sbjct: 823 VDNYLWQI 830


>sp|Y028_OSHVF|UNCHARACTERIZED protein ORF28|Ostreid herpesvirus 1 (isolate France)

Query: 3 MDEYLWM 9
MD Y WM
Sbjct: 191 MDYYCWM 197


>sp|CAPSH_ADEG1|HEXON protein|Fowl adenovirus A serotype 1

Query: 4 DEYLWMV 10
D YLW V
Sbjct: 858 DNYLWTV 864




2|Sequence|6|15|YLWMVILGFI

>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 3 WMVILGFI 10
WM++LG +
Sbjct: 969 WMIVLGIV 976


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 YLWMVILGFI 10
Y+W+ LGF+
Sbjct: 2857 YMWIWHLGFL 2866


>sp|L_RINDR|RNA-DIRECTED RNA polymerase L|Rinderpest virus (strain RBOK) (RDV)

Query: 1 YLWMVILGF 9
Y+W +I GF
Sbjct: 260 YMWKLIDGF 268


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 YLWMVILGF 9
Y+W +I GF
Sbjct: 260 YMWKLIDGF 268


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 YLWMVILGF 9
Y+W +I GF
Sbjct: 260 YMWKLIDGF 268


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 YLWMVILGF 9
Y+W +I GF
Sbjct: 260 YMWKLIDGF 268


>sp|L_CDVO|RNA-DIRECTED RNA polymerase L|Canine distemper virus (strain Onderstepoort)

Query: 1 YLWMVILGF 9
YLW +I GF
Sbjct: 260 YLWDLIDGF 268


>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1 YLWMVILGFI 10
Y++M+ GF+
Sbjct: 62 YMYMICYGFV 71


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 1 YLWMVILGFI 10
Y+W+ LGF+
Sbjct: 2857 YMWIWHLGFL 2866


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 WMVILGFI 10
WM++LG +
Sbjct: 878 WMMVLGVV 885


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3 WMVILGFI 10
W V LGFI
Sbjct: 1196 WYVWLGFI 1203


>sp|SPIKE_BCRP3|SPIKE glycoprotein|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 3 WMVILGFI 10
W V LGFI
Sbjct: 1182 WYVWLGFI 1189


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 WMVILGFI 10
W V LGFI
Sbjct: 1298 WYVWLGFI 1305


>sp|SPIKE_BCHK3|SPIKE glycoprotein|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 3 WMVILGFI 10
W V LGFI
Sbjct: 1183 WYVWLGFI 1190


>sp|SPIKE_BC279|SPIKE glycoprotein|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 3 WMVILGFI 10
W V LGFI
Sbjct: 1182 WYVWLGFI 1189


>sp|GI_BHV1S|ENVELOPE glycoprotein I|Bovine herpesvirus 1.2 (strain ST)

Query: 2 LWMVILG 8
LWMV+L
Sbjct: 6 LWMVVLA 12


>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3

Query: 3 WMVILGFI 10
W+VI+G I
Sbjct: 55 WIVIVGII 62


>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7

Query: 3 WMVILGFI 10
W+VI+G I
Sbjct: 55 WIVIVGII 62


>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P

Query: 1 YLWMVILGFI 10
++W+ +LG +
Sbjct: 13 FIWLALLGAV 22




3|Sequence|11|20|ILGFIIAFIL

>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 LGFIIAFIL 10
LGF+I++IL
Sbjct: 2863 LGFLISYIL 2871


>sp|R1A_PEDV7|REPLICASE polyprotein 1a|Porcine epidemic diarrhea virus (strain

Query: 2 LGFIIAFIL 10
LGF+I++IL
Sbjct: 2863 LGFLISYIL 2871


>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1 ILGFIIAFIL 10
+L F+I+FIL
Sbjct: 9 VLTFLISFIL 18


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 GFIIAFI 9
GFIIA+I
Sbjct: 2745 GFIIAYI 2751


>sp|VP7_ROTEO|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1 ILGFIIAFIL 10
+L F+I+FIL
Sbjct: 9 VLTFLISFIL 18


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 3 GFIIAFI 9
GFIIA+I
Sbjct: 2745 GFIIAYI 2751


>sp|MB43_GAHVM|MEMBRANE protein UL43 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 ILGFIIAFIL 10
I GF+IAFI+
Sbjct: 92 ITGFLIAFIV 101


>sp|A464_PBCV1|PUTATIVE protein A464R|Paramecium bursaria Chlorella virus 1

Query: 1 ILGFIIA 7
+LGFIIA
Sbjct: 94 VLGFIIA 100




4|Sequence|16|25|IAFILAFSVG

>sp|YR260_MIMIV|DNAJ-LIKE protein R260|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IAFILAFSVG 10
I FILAFS G
Sbjct: 237 IVFILAFSDG 246




5|Sequence|21|30|AFSVGANDVA

***** No hits found ******


6|Sequence|26|35|ANDVANSFGT

>sp|NCAP_GOGV|NUCLEOPROTEIN 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009)

Query: 3 DVANSFGT 10
D+AN FGT
Sbjct: 173 DLANQFGT 180


>sp|L_BCNVU|RNA-DIRECTED RNA polymerase L|Bear Canyon mammarenavirus (isolate Mouse/United

Query: 2 NDVANSFGT 10
ND +N FGT
Sbjct: 512 NDKSNYFGT 520


>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United

Query: 1 ANDVANSF 8
+ DVANSF
Sbjct: 330 SEDVANSF 337


>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)

Query: 1 ANDVANSF 8
+ DVANSF
Sbjct: 330 SEDVANSF 337


>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)

Query: 1 ANDVANSF 8
+ DVANSF
Sbjct: 330 SEDVANSF 337


>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 1 ANDVANSF 8
+ DVANSF
Sbjct: 330 SEDVANSF 337


>sp|GB_EHV2|ENVELOPE glycoprotein B|Equine herpesvirus 2 (strain 86/87)

Query: 1 ANDVANSFGT 10
AND+ SF T
Sbjct: 330 ANDITASFST 339


>sp|VG26_BPML5|MINOR tail protein Gp26|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 ANDVANSFGT 10
+N ANSFGT
Sbjct: 273 SNAGANSFGT 282




7|Sequence|31|40|NSFGTAVGSG

>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 NSFGTAVGSG 10
NSF TA G+G
Sbjct: 1399 NSFVTAQGTG 1408


>sp|POL1_TORVR|RNA1 polyprotein|Tomato ringspot virus (isolate raspberry)

Query: 2 SFGTAVG 8
SFGT+VG
Sbjct: 2144 SFGTSVG 2150


>sp|VP51_BPAPS|PUTATIVE protein p51|Acyrthosiphon pisum secondary endosymbiont phage

Query: 1 NSFGTA 6
NSFGTA
Sbjct: 133 NSFGTA 138


>sp|RPOA_LDVC|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 3 FGTAVGSG 10
FG+A GSG
Sbjct: 1526 FGSASGSG 1533


>sp|RPOA_LDVP|REPLICASE polyprotein 1ab|Lactate dehydrogenase elevating virus (strain

Query: 3 FGTAVGSG 10
FG+A GSG
Sbjct: 1528 FGSASGSG 1535


>sp|RDRP_TNVD|RNA-DIRECTED RNA polymerase|Tobacco necrosis virus (strain D)

Query: 1 NSFGTAVGSG 10
N++ TAVG+G
Sbjct: 612 NAWVTAVGTG 621


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2 SFGTAVGSG 10
S GTA G+G
Sbjct: 1036 SLGTAFGAG 1044


>sp|P32K_ADES1|STRUCTURAL protein p32K|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 FGTAVG 8
FGTAVG
Sbjct: 216 FGTAVG 221




8|Sequence|36|45|AVGSGVVTLR

>sp|VEF_GVTN|VIRAL-ENHANCING factor|Trichoplusia ni granulosis virus (TnGV)

Query: 1 AVGSGVVTLR 10
VG GV TLR
Sbjct: 493 GVGPGVYTLR 502


>sp|VEF_GVPU|VIRAL-ENHANCING factor|Pseudalatia unipuncta granulosis virus (PuGV)

Query: 1 AVGSGVVTLR 10
VG GV TLR
Sbjct: 493 GVGPGVYTLR 502


>sp|VEF_GVHA|VIRAL-ENHANCING factor|Heliothis armigera granulosis virus (HaGV)

Query: 1 AVGSGVVTLR 10
VG GV TLR
Sbjct: 493 GVGPGVYTLR 502




9|Sequence|41|50|VVTLRQACIL

>sp|VXIS_BPSF5|EXCISIONASE phage SfV (Shigella flexneri

Query: 2 VTLRQACI 9
+T RQACI
Sbjct: 77 LTTRQACI 84


>sp|VXIS_BPP22|EXCISIONASE phage P22 (Bacteriophage P22)

Query: 2 VTLRQACI 9
+T RQACI
Sbjct: 46 LTTRQACI 53




10|Sequence|46|55|QACILASIFE

>sp|NCAP_HAZVJ|NUCLEOPROTEIN virus (isolate JC280)

Query: 2 ACILASIFE 10
ACI++S+FE
Sbjct: 430 ACIISSLFE 438


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 ACILASIF 9
ACI+A+IF
Sbjct: 2199 ACIIATIF 2206




11|Sequence|51|60|ASIFETTGSV

>sp|VF475_ASFM2|UNCHARACTERIZED protein B475L|African swine fever virus (isolate

Query: 2 SIFETTGS 9
SIFET G+
Sbjct: 10 SIFETVGA 17


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 SIFETTGSV 10
S+FETTG +
Sbjct: 419 SVFETTGGL 427


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 SIFETTGSV 10
S+FETTG +
Sbjct: 419 SVFETTGGL 427


>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain

Query: 2 SIFETTGS 9
S FETTG+
Sbjct: 421 SYFETTGA 428


>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate

Query: 2 SIFETTGS 9
S FETTG+
Sbjct: 421 SYFETTGA 428


>sp|NCAP_THOGV|NUCLEOPROTEIN virus (isolate SiAr 126)

Query: 2 SIFETTG 8
S+F+TTG
Sbjct: 309 SVFQTTG 315




12|Sequence|56|65|TTGSVLLGAK

>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 2 TGSVLLGA 9
TGS+L+G+
Sbjct: 580 TGSILIGS 587




13|Sequence|61|70|LLGAKVGETI

>sp|NSP12_RDVF|NON-STRUCTURAL protein 12A|Rice dwarf virus (isolate Fujian)

Query: 2 LGAKVGETI 10
LGAKVG+ I
Sbjct: 251 LGAKVGQVI 259


>sp|DNBI_SUHV|MAJOR DNA-binding protein|Suid herpesvirus 1 (SuHV-1) (Pseudorabies

Query: 3 GAKVGETI 10
GA++GET+
Sbjct: 584 GARIGETV 591


>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a

Query: 2 LGAKVGETI 10
LG K+G+TI
Sbjct: 275 LGGKMGDTI 283


>sp|REP_CDDV1|REPLICATION-ASSOCIATED protein|Chaetoceros diatodnavirus 1 (Chaetoceros setoense

Query: 2 LGAKVGET 9
LG K+GET
Sbjct: 278 LGTKLGET 285


>sp|POL2_CPSMV|RNA2 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 LLGAKVGET 9
+LGA +G+T
Sbjct: 453 MLGAMIGQT 461




14|Sequence|66|75|VGETIRKGII

>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 VGETIRKGII 10
+GET+RK ++
Sbjct: 4411 LGETVRKAVL 4420


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 1 VGETIRKGI 9
+GE I+KGI
Sbjct: 488 IGEQIKKGI 496


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 1 VGETIRKGI 9
+G+ I+KGI
Sbjct: 488 IGDQIKKGI 496




15|Sequence|71|80|RKGIIDVNLY

>sp|O1_FOWPN|PROTEIN O1 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 1 RKGIIDVNL 9
+KGIID+N
Sbjct: 461 KKGIIDINF 469


>sp|RPB1_IIV3|PROBABLE DNA-directed RNA polymerase II|Invertebrate iridescent virus 3

Query: 1 RKGIIDVNL 9
RKG+ID L
Sbjct: 830 RKGVIDTAL 838


>sp|POL2_CNSV|RNA2 polyprotein|Cycas necrotic stunt virus (CNSV)

Query: 1 RKGIIDVNL 9
+KG ID NL
Sbjct: 728 QKGYIDTNL 736




16|Sequence|76|85|DVNLYNETVE

>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate

Query: 3 NLYNETVE 10
NLYNET +
Sbjct: 599 NLYNETYD 606


>sp|VGCR_ELHVK|G-PROTEIN coupled receptor|Elephantid herpesvirus 1 (isolate Asian

Query: 2 VNLYNETVE 10
+NL+NET++
Sbjct: 4 LNLFNETIK 12


>sp|YL494_MIMIV|UNCHARACTERIZED protein L494|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DVNLYNE 7
D NLYNE
Sbjct: 108 DCNLYNE 114


>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 DVNLYNETV 9
D NLY ET+
Sbjct: 1040 DRNLYRETM 1048


>sp|NRAM_I79A7|NEURAMINIDASE A virus (strain A/Grey

Query: 2 VNLYNET 8
+N YNET
Sbjct: 53 INYYNET 59




17|Sequence|81|90|NETVETLMAG

***** No hits found ******


18|Sequence|86|95|TLMAGEVSAM

>sp|CAPSD_AQRVC|INNER capsid protein VP3|Aquareovirus C (isolate Golden

Query: 2 LMAGEVSAM 10
L+ GEVSAM
Sbjct: 376 LIGGEVSAM 384


>sp|POL1_TBRVM|RNA1 polyprotein|Tomato black ring virus (strain

Query: 1 TLMAGEVSA 9
TLMAG++ A
Sbjct: 328 TLMAGKIHA 336




19|Sequence|91|100|EVSAMVGSAV

***** No hits found ******


20|Sequence|96|105|VGSAVWQLIA

>sp|REP_SSVN|REPLICATION-ASSOCIATED protein|Sugarcane streak virus (isolate South

Query: 1 VGSAVWQLIA 10
VG +W LIA
Sbjct: 37 VGLHIWSLIA 46


>sp|REPA_SSVN|REPLICATION-ASSOCIATED protein A|Sugarcane streak virus (isolate South

Query: 1 VGSAVWQLIA 10
VG +W LIA
Sbjct: 37 VGLHIWSLIA 46


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 1 VGSAVWQLI 9
+G ++WQL+
Sbjct: 1648 LGDSLWQLL 1656


>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA

Query: 1 VGSAVWQLI 9
VG+++WQ++
Sbjct: 2396 VGASMWQIL 2404




21|Sequence|101|110|WQLIASFLRL

>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 1 WQLIASFLR 9
W+LIA FLR
Sbjct: 399 WKLIAQFLR 407


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 1 WQLIASFLR 9
WQ I SFLR
Sbjct: 484 WQYIDSFLR 492


>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 WQLIASFLRL 10
W+ +ASFL L
Sbjct: 46 WEQLASFLSL 55


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 1 WQLIASFLR 9
WQ I +FLR
Sbjct: 488 WQYIDAFLR 496


Query: 1 WQLIASFLR 9
WQ I FLR
Sbjct: 398 WQDIVKFLR 406


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 WQLIASFLR 9
WQ I FLR
Sbjct: 397 WQDIVKFLR 405


Query: 1 WQLIASFLR 9
WQ I FLR
Sbjct: 487 WQYIDMFLR 495




22|Sequence|106|115|SFLRLPISGT

>sp|TERL_BPT5|TERMINASE, large subunit|Escherichia phage T5 (Enterobacteria phage

Query: 2 FLRLPISG 9
F RLP+SG
Sbjct: 22 FFRLPVSG 29


>sp|HJC_SIRV1|CROSSOVER junction endodeoxyribonuclease|Sulfolobus islandicus rod-shaped

Query: 3 LRLPISGT 10
LR+P+SGT
Sbjct: 26 LRIPVSGT 33


>sp|VF307_IIV3|UNCHARACTERIZED protein 033L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 SFLRLPISG 9
+FLR PI+G
Sbjct: 100 AFLRNPITG 108


>sp|MCE_MYXVU|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain

Query: 2 FLRLPISGT 10
FL++PI+ T
Sbjct: 293 FLKIPITNT 301


>sp|MCE_MYXVL|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Myxoma virus (strain

Query: 2 FLRLPISGT 10
FL++PI+ T
Sbjct: 293 FLKIPITNT 301




23|Sequence|111|120|PISGTHCIVG

>sp|YL115_MIMIV|PUTATIVE helicase L115|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PISGTHCIV 9
P G HCIV
Sbjct: 1146 PKKGDHCIV 1154


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 4 GTHCIVG 10
GTHC+ G
Sbjct: 265 GTHCVCG 271


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 4 GTHCIVG 10
GTHC+ G
Sbjct: 265 GTHCVCG 271


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 4 GTHCIVG 10
GTHC+ G
Sbjct: 265 GTHCVCG 271


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PISGTHC 7
PI+ THC
Sbjct: 330 PINDTHC 336


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 1 PISGTHC 7
PI+ THC
Sbjct: 330 PINDTHC 336


>sp|YR735_MIMIV|UNCHARACTERIZED protein R735|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PISGTHCIV 9
PISG C V
Sbjct: 205 PISGQECYV 213


>sp|GLYC_MOPEI|PRE-GLYCOPROTEIN polyprotein GP complex|Mopeia virus (MOPV)

Query: 2 ISGTHCI 8
ISGT CI
Sbjct: 205 ISGTQCI 211


>sp|UL64_HCMVA|UNCHARACTERIZED protein UL64|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ISGTHCI 8
ISG HC+
Sbjct: 79 ISGHHCV 85


>sp|VP1_MPRVN|UNCHARACTERIZED protein VP1|Micromonas pusilla reovirus (isolate Netherlands/2005)

Query: 1 PISGTHCIVG 10
PI+ T C+ G
Sbjct: 1532 PITDTSCVFG 1541


>sp|POLG_SVV1|GENOME polyprotein|Seneca Valley virus (isolate -/United

Query: 3 SGTHCIVG 10
S HCIVG
Sbjct: 1901 SLAHCIVG 1908




24|Sequence|116|125|HCIVGSTIGF

>sp|CAPSD_BPMD2|PROBABLE major capsid protein gp17|Mycobacterium phage D29

Query: 1 HCIVGSTIGF 10
H + G+T+GF
Sbjct: 234 HVVEGTTVGF 243


>sp|DEPOL_BPK56|DEPOLYMERASE, capsule KL47-specific|Klebsiella phage P560 (Bacteriophage P560)

Query: 4 VGSTIGF 10
VGST+GF
Sbjct: 423 VGSTVGF 429


>sp|L_SYNV|RNA-DIRECTED RNA polymerase L|Sonchus yellow net virus (SYNV)

Query: 1 HCIVGSTI-GF 10
H IVGSTI GF
Sbjct: 1079 HDIVGSTIPGF 1089


>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)

Query: 2 CIVGSTIGF 10
CI G + GF
Sbjct: 2109 CICGESFGF 2117


>sp|POL1_ARMVN|RNA1 polyprotein|Arabis mosaic virus (isolate NW)

Query: 2 CIVGSTIGF 10
CI G + GF
Sbjct: 2108 CICGESFGF 2116


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 2 CIVGSTIG 9
C+VG +IG
Sbjct: 794 CLVGPSIG 801


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 2 CIVGSTIG 9
C+VG +IG
Sbjct: 794 CLVGPSIG 801


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 HCIVGSTI 8
HC+ STI
Sbjct: 527 HCVAESTI 534


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 HCIVGSTI 8
HC+ STI
Sbjct: 527 HCVAESTI 534


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 HCIVGSTI 8
HC+ STI
Sbjct: 527 HCVAESTI 534


>sp|NS7B_CVFE3|NON-STRUCTURAL protein 7b|Feline enteric coronavirus (strain 79-1683)

Query: 1 HCIVGS 6
HCI+GS
Sbjct: 164 HCILGS 169


>sp|RDRP_SSDRV|RNA replication protein|Sclerotinia sclerotiorum

Query: 1 HCIVGSTI 8
+C +GSTI
Sbjct: 133 NCCIGSTI 140




25|Sequence|121|130|STIGFSLVAI

>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 TIGFSLVA 9
TIG SLVA
Sbjct: 1231 TIGLSLVA 1238


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 TIGFSLVA 9
TIG SLVA
Sbjct: 1232 TIGLSLVA 1239




26|Sequence|126|135|SLVAIGTKGV

***** No hits found ******


27|Sequence|131|140|GTKGVQWMEL

>sp|GTA_NPVAC|PROBABLE global transactivator|Autographa californica nuclear polyhedrosis

Query: 3 KGVQWM 8
KG+QWM
Sbjct: 36 KGIQWM 41


>sp|SYC_MIMIV|CYSTEINE--TRNA ligase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 KGVQWMEL 10
KG+ W+EL
Sbjct: 73 KGITWLEL 80


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 1 GTKGVQWME 9
GT+G++W +
Sbjct: 1791 GTRGIRWAQ 1799


>sp|MU1_REOVL|OUTER capsid protein mu-1|Reovirus type 1 (strain Lang)

Query: 4 GVQWMEL 10
G+QWM++
Sbjct: 246 GIQWMDV 252


>sp|MU1_REOVJ|OUTER capsid protein mu-1|Reovirus type 2 (strain D5/Jones)

Query: 4 GVQWMEL 10
G+QWM++
Sbjct: 246 GIQWMDV 252


>sp|MU1_REOVD|OUTER capsid protein mu-1|Reovirus type 3 (strain Dearing)

Query: 4 GVQWMEL 10
G+QWM++
Sbjct: 246 GIQWMDV 252


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 1 GTKGVQW 7
GT G QW
Sbjct: 421 GTSGTQW 427


>sp|POLG_HED68|GENOME polyprotein|Human enterovirus D68 (EV68) (EV-68)

Query: 4 GVQWME 9
G+QW+E
Sbjct: 938 GIQWIE 943


>sp|IBMP_SOCMV|TRANSACTIVATOR/VIROPLASMIN protein|Soybean chlorotic mottle virus

Query: 2 TKGVQWMEL 10
TKG+Q +EL
Sbjct: 37 TKGIQTLEL 45


>sp|FIB37_BPK3|LONG tail fiber protein Gp37|Enterobacteria phage K3 (Bacteriophage K3)

Query: 1 GTKGVQW 7
GT+ +QW
Sbjct: 463 GTRAIQW 469


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 1 GTKGVQW 7
G++GV+W
Sbjct: 1792 GSRGVRW 1798


>sp|YL274_MIMIV|UNCHARACTERIZED protein L274|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 TKGVQWME 9
TKG+ W++
Sbjct: 190 TKGIDWVQ 197


>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GTKGVQWMEL 10
G GV+W ++
Sbjct: 325 GPSGVKWFDI 334


>sp|SEMA_ECTVM|SEMAPHORIN-LIKE protein 139|Ectromelia virus (strain Moscow) (ECTV)

Query: 1 GTKGVQWMEL 10
G GV+W ++
Sbjct: 321 GPSGVKWFDI 330


>sp|SEMA2_VACCW|SEMAPHORIN-LIKE protein VACWR164|Vaccinia virus (strain Western Reserve)

Query: 1 GTKGVQWMEL 10
G GV+W ++
Sbjct: 64 GPSGVKWFDI 73




28|Sequence|136|145|QWMELVKIVA

>sp|1A_CMVQ|REPLICATION protein 1a|Cucumber mosaic virus (strain Q)

Query: 2 WMELVKIV 9
WM+L KI+
Sbjct: 383 WMDLFKII 390


>sp|CAPSD_BPK21|MAJOR capsid protein|Pseudomonas phage KPP21

Query: 1 QWMELVKIVA 10
+W+ L+K VA
Sbjct: 386 EWIALIKTVA 395


>sp|TRM1_GAHVM|TRIPARTITE terminase subunit 1|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 QWMELVK 7
+W+E+VK
Sbjct: 485 EWLEMVK 491




29|Sequence|141|150|VKIVASWFIS

>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 VKIVASWFIS 10
V I A WFIS
Sbjct: 151 VNISARWFIS 160


>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 KIVASWF 8
KIV++WF
Sbjct: 2747 KIVSTWF 2753


>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 KIVASWF 8
KIV++WF
Sbjct: 2739 KIVSTWF 2745


>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Query: 2 KIVASWF 8
KIV++WF
Sbjct: 2747 KIVSTWF 2753


>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like

Query: 2 KIVASWF 8
KIV++WF
Sbjct: 2739 KIVSTWF 2745


>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 KIVASWF 8
K+V++WF
Sbjct: 2735 KVVSTWF 2741


>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like

Query: 2 KIVASWF 8
K+V++WF
Sbjct: 2735 KVVSTWF 2741




30|Sequence|146|155|SWFISPLLSG

>sp|VS48_TBRVE|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 2 WFISPLLSG 10
W I+PLLSG
Sbjct: 386 WMIAPLLSG 394


>sp|VS48_TBRVS|SATELLITE RNA 48 kDa protein|Tomato black ring virus satellite

Query: 2 WFISPLLSG 10
W I+PLLSG
Sbjct: 386 WMIAPLLSG 394


>sp|VS48_TBRVL|SATELLITE RNA 48 kDa protein|Tomato black ring virus (strain

Query: 2 WFISPLLSG 10
W I+PLLSG
Sbjct: 391 WMITPLLSG 399


>sp|VS48_BRSV|SATELLITE RNA 48 kDa protein|Beet ringspot virus (BRSV) (Tomato

Query: 2 WFISPLLSG 10
W I+PLLSG
Sbjct: 391 WMITPLLSG 399


>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 1 SWFISPLLS 9
+WFI P++S
Sbjct: 215 TWFIVPIIS 223


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 SWFISPLLS 9
+WFI P++S
Sbjct: 215 TWFIVPIIS 223


>sp|UL15B_PSHV1|LARGE terminase protein homolog UL15b|Psittacid herpesvirus 1 (isolate

Query: 1 SWFISPLLS 9
+WF+ PL+S
Sbjct: 325 TWFLVPLIS 333


>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 SWFISPLLS 9
+WFI P++S
Sbjct: 219 TWFIIPIIS 227


>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 SWFISPLLS 9
+WFI P++S
Sbjct: 219 TWFIIPIIS 227


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 1 SWFISPLLS 9
+WF+ PL++
Sbjct: 265 TWFLVPLIA 273


>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)

Query: 1 SWFISPLLS 9
+WF+ PL++
Sbjct: 265 TWFLVPLIA 273


>sp|TRM3_GAHVM|TRIPARTITE terminase subunit 3|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 SWFISPLLS 9
+WF+ PL++
Sbjct: 270 TWFLVPLIA 278


>sp|TRM3_EHV1V|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain V592)

Query: 1 SWFISPLLS 9
+WF+ PL++
Sbjct: 266 TWFLVPLIA 274


>sp|TRM3_EHV1B|TRIPARTITE terminase subunit 3|Equine herpesvirus 1 (strain Ab4p)

Query: 1 SWFISPLLS 9
+WF+ PL++
Sbjct: 266 TWFLVPLIA 274


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 SWFISPLLS 9
+WF+ PL++
Sbjct: 274 TWFLVPLIA 282


>sp|NSP_MDV1|PUTATIVE nuclear shuttle protein|Milk vetch dwarf virus (isolate

Query: 2 WFISPL 7
WF SPL
Sbjct: 4 WFASPL 9


>sp|L_RSVT|RNA-DIRECTED RNA polymerase L|Rice stripe virus (isolate T)

Query: 3 FISPLLSG 10
F++P++SG
Sbjct: 709 FVNPMISG 716


>sp|VG27_EHV2|UNCHARACTERIZED gene 27 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 SWFISPLLS 9
+W+++PL S
Sbjct: 120 AWYLNPLFS 128


>sp|DUT_ALHV1|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Alcelaphine herpesvirus 1

Query: 3 FISPLLSG 10
F+SP+L+G
Sbjct: 120 FLSPILTG 127




31|Sequence|151|160|PLLSGFMSGL

>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)

Query: 1 PLLSGFMSGL 10
PL+ GF+ GL
Sbjct: 230 PLIGGFIDGL 239


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 1 PLLSGFM 7
P+LSGFM
Sbjct: 350 PVLSGFM 356


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 PLLSGFMS 8
PLL GFM+
Sbjct: 3651 PLLFGFMA 3658


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 PLLSGFMS 8
PLL GFM+
Sbjct: 3651 PLLFGFMA 3658


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 PLLSGFMS 8
PLL GFM+
Sbjct: 3644 PLLLGFMA 3651


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 PLLSGFMS 8
PLL GFM+
Sbjct: 3644 PLLLGFMA 3651


>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)

Query: 3 LSGFMSGL 10
+SGF++GL
Sbjct: 546 ISGFLTGL 553




32|Sequence|156|165|FMSGLLFVLI

***** No hits found ******


33|Sequence|161|170|LFVLIRIFIL

***** No hits found ******


34|Sequence|166|175|RIFILKKEDP

>sp|YL294_MIMIV|UNCHARACTERIZED protein L294|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FILKKEDP 10
F+L+KEDP
Sbjct: 1415 FLLEKEDP 1422


>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain

Query: 1 RIFILKKEDP 10
R+F++ DP
Sbjct: 36 RVFVINNNDP 45


>sp|NCAP_SV41|NUCLEOPROTEIN virus 41 (SV41)

Query: 1 RIFILKKEDP 10
R+F++ DP
Sbjct: 36 RVFVVNSNDP 45


>sp|VP4_AHSV|CORE protein VP4|African horse sickness virus (AHSV)

Query: 2 IFILKKE 8
IFILKKE
Sbjct: 86 IFILKKE 92


>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain

Query: 3 FILKKED 9
FILKK+D
Sbjct: 723 FILKKKD 729


>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)

Query: 3 FILKKED 9
FILKK+D
Sbjct: 723 FILKKKD 729




35|Sequence|171|180|KKEDPVPNGL

>sp|RDRP_GLVWB|PROBABLE RNA-directed RNA polymerase|Giardia lamblia virus (isolate Wang)

Query: 1 KKEDPVPNGL 10
+KEDPVP +
Sbjct: 1012 RKEDPVPGSI 1021


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 4 DPVPNG 9
DP+PNG
Sbjct: 626 DPIPNG 631


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 KKEDPVPN 8
KKE+P+P+
Sbjct: 1488 KKEEPIPS 1495


>sp|RDRP_MCMVK|RNA-DIRECTED RNA polymerase|Maize chlorotic mottle virus (isolate

Query: 1 KKEDPVP 7
KK DPVP
Sbjct: 595 KKADPVP 601


>sp|SEGB_BPT4|PUTATIVE endonuclease segB|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 KKEDPVPNG 9
KK DP+P G
Sbjct: 204 KKTDPIPEG 212


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 KKEDPVPNGL 10
K+ P+PNG+
Sbjct: 6848 KQSIPMPNGV 6857


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 KKEDPVPNGL 10
K+ P+PNG+
Sbjct: 6855 KQSIPMPNGV 6864


>sp|RDRP_PEMVW|PROTEIN P1-P2|Pea enation mosaic virus-1 (strain

Query: 3 EDPVPNG 9
EDP+P G
Sbjct: 604 EDPLPKG 610


>sp|P5_PBCV1|MINOR capsid protein P5|Paramecium bursaria Chlorella virus 1

Query: 1 KKEDPVPNGL 10
KK+ P+PN L
Sbjct: 44 KKQKPLPNNL 53


>sp|POLG_CILVC|RNA replication protein|Citrus leprosis virus C (isolate

Query: 1 KKEDPVPNG 9
+K+D +P+G
Sbjct: 186 RKDDDIPDG 194


>sp|PHOSP_HRSV|PHOSPHOPROTEIN respiratory syncytial virus

Query: 2 KEDPVP 7
KEDP+P
Sbjct: 88 KEDPIP 93




36|Sequence|176|185|VPNGLRALPV

>sp|POLG_PVMA|GENOME polyprotein|Potato virus A (PVA)

Query: 1 VPNGLRALPV 10
VPNG+R L +
Sbjct: 538 VPNGIRKLAI 547


>sp|MVP_PVMA|P3N-PIPO polyprotein|Potato virus A (PVA)

Query: 1 VPNGLRALPV 10
VPNG+R L +
Sbjct: 538 VPNGIRKLAI 547


>sp|POLG_LMVE|GENOME polyprotein|Lettuce mosaic virus (strain E)

Query: 1 VPNGLRAL 8
+PNGLR++
Sbjct: 357 IPNGLRSI 364


>sp|MVP_LMVE|P3N-PIPO polyprotein|Lettuce mosaic virus (strain E)

Query: 1 VPNGLRAL 8
+PNGLR++
Sbjct: 357 IPNGLRSI 364


>sp|Y010_OSHVF|UNCHARACTERIZED protein ORF10|Ostreid herpesvirus 1 (isolate France)

Query: 1 VPNGLRALPV 10
+P LRA+P+
Sbjct: 319 IPKELRAIPI 328


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 1 VPNGLRALP 9
+P G++ALP
Sbjct: 368 LPKGVKALP 376


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1 VPNGLRALP 9
+P GL ALP
Sbjct: 376 IPKGLIALP 384


>sp|POLG_LMV0|GENOME polyprotein|Lettuce mosaic virus (strain 0

Query: 1 VPNGLRAL 8
+PNGLR +
Sbjct: 357 IPNGLRPI 364


>sp|MVP_LMV0|P3N-PIPO polyprotein|Lettuce mosaic virus (strain 0

Query: 1 VPNGLRAL 8
+PNGLR +
Sbjct: 357 IPNGLRPI 364


>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57

Query: 1 VPNGLRALP 9
+P G++ALP
Sbjct: 177 LPKGVKALP 185


>sp|PORTL_BPHC1|PROBABLE portal protein|Haemophilus phage HP1 (strain HP1c1)

Query: 2 PNGLRALPV 10
P+GL+ +P+
Sbjct: 249 PDGLKVIPI 257




37|Sequence|181|190|RALPVFYAAT

>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 3 LPVFYAAT 10
+PV+Y AT
Sbjct: 1612 IPVYYTAT 1619


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 3 LPVFYAA 9
LP+FY A
Sbjct: 1552 LPIFYTA 1558




38|Sequence|186|195|FYAATIAINV

***** No hits found ******


39|Sequence|191|200|IAINVFSIMY

>sp|SHUT_SUHVK|VIRION host shutoff protein|Suid herpesvirus 1 (strain Kaplan)

Query: 1 IAINVFSIMY 10
IAI+++++MY
Sbjct: 31 IAIDLWNVMY 40


>sp|SHUT_EHV1V|VIRION host shutoff protein|Equine herpesvirus 1 (strain V592)

Query: 1 IAINVFSIMY 10
IAI+++++MY
Sbjct: 31 IAIDLWNVMY 40


>sp|SHUT_EHV1B|VIRION host shutoff protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 IAINVFSIMY 10
IAI+++++MY
Sbjct: 31 IAIDLWNVMY 40




40|Sequence|196|205|FSIMYTGAPV

>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 SIMYTGA 8
SIMYTGA
Sbjct: 34 SIMYTGA 40


>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 SIMYTGA 8
SIMYTGA
Sbjct: 34 SIMYTGA 40


>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 SIMYTGA 8
SIMYTGA
Sbjct: 34 SIMYTGA 40


>sp|MCAPS_BWYVG|READTHROUGH protein P3-RTD|Beet western yellows virus (isolate

Query: 3 IMYTGAPV 10
I+YTG PV
Sbjct: 228 IVYTGVPV 235


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 FSIMYTG 7
FS+MYTG
Sbjct: 444 FSLMYTG 450


>sp|MCAPS_TYYVF|READTHROUGH protein P3-RTD|Turnip yellows virus (isolate FL-1)

Query: 3 IMYTGAPV 10
I+YTG PV
Sbjct: 229 IVYTGVPV 236


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 1 FSIMYTGAPV 10
FS+ Y+G P+
Sbjct: 1118 FSLAYSGQPI 1127


>sp|VF509_ASFM2|PUTATIVE ATP-dependent RNA helicase QP509L|African swine fever virus

Query: 1 FSIMYTGAPV 10
F+I+YT PV
Sbjct: 74 FNIVYTAHPV 83


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 3 IMYTGAPV 10
+ YTG PV
Sbjct: 883 VTYTGGPV 890




41|Sequence|201|210|TGAPVLGLVL

>sp|ITP_EHV2|INNER tegument protein|Equine herpesvirus 2 (strain 86/87)

Query: 2 GAPVLGL 8
GAPVLG
Sbjct: 269 GAPVLGF 275


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 TGAPVLGLV 9
TG P +GL+
Sbjct: 1645 TGNPAIGLI 1653


>sp|P49_ASFP4|MINOR capsid protein p49|African swine fever virus (isolate

Query: 1 TGAPVLG 7
TG P+LG
Sbjct: 260 TGVPILG 266


>sp|P49_ASFK5|MINOR capsid protein p49|African swine fever virus (isolate

Query: 1 TGAPVLG 7
TG P+LG
Sbjct: 260 TGVPILG 266


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 1 TGAPVLGLV 9
T APV+G++
Sbjct: 1736 TSAPVIGIM 1744


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1 TGAPVLGLV 9
T APV+G++
Sbjct: 1736 TSAPVIGIM 1744




42|Sequence|206|215|LGLVLPMWAI

>sp|UL87_ALHV1|UNCHARACTERIZED gene 24 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 LGLVLPMWA 9
+GL+ P WA
Sbjct: 284 IGLLFPQWA 292


>sp|NS1A_ANV1|NON-STRUCTURAL polyprotein 1A|Avian nephritis virus 1 (ANV-1)

Query: 3 LVLPMWAI 10
++LPMW I
Sbjct: 404 IMLPMWII 411


>sp|NS1AB_ANV1|NON-STRUCTURAL polyprotein 1AB|Avian nephritis virus 1 (ANV-1)

Query: 3 LVLPMWAI 10
++LPMW I
Sbjct: 404 IMLPMWII 411


>sp|VP75_ALHV1|PROBABLE membrane antigen 75|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 GLVLPMW 8
G+VLP W
Sbjct: 1202 GMVLPCW 1208


>sp|OE66_NPVLS|OCCLUSION-DERIVED virus envelope protein E66|Leucania separata nucleopolyhedrovirus

Query: 1 LGLVLPMW 8
LGL++P W
Sbjct: 110 LGLIVPDW 117


>sp|GB_GPCMV|ENVELOPE glycoprotein B|Guinea pig cytomegalovirus (strain 22122)

Query: 3 LVLPMWAI 10
+ LPMW I
Sbjct: 158 VALPMWEI 165


>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LGLVLPMW 8
GL++P W
Sbjct: 2649 FGLIVPTW 2656


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LGLVLPMW 8
GL++P W
Sbjct: 2647 FGLIVPTW 2654


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 1 LGLVLPMW 8
GL++P W
Sbjct: 2647 FGLIVPTW 2654


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LGLVLPMW 8
GL++P W
Sbjct: 2649 FGLIVPTW 2656


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LGLVLPMW 8
GL++P W
Sbjct: 2647 FGLIVPTW 2654


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 1 LGLVLPMW 8
GL++P W
Sbjct: 2647 FGLIVPTW 2654


>sp|Y068_OSHVF|PUTATIVE transmembrane protein ORF68|Ostreid herpesvirus 1 (isolate France)

Query: 1 LGLVLPMWAI 10
+GL+LP+ AI
Sbjct: 672 IGLLLPILAI 681


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LGLVLPMWAI 10
G V+P+W +
Sbjct: 3207 FGTVVPIWMV 3216


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 1 LGLVLPMWAI 10
G V+P+W +
Sbjct: 3207 FGTVVPIWMV 3216


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 2 GLVLPMWA 9
G VLP WA
Sbjct: 1177 GTVLPSWA 1184


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 LGLVLPMWA 9
G +LP+WA
Sbjct: 270 FGNILPLWA 278


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 LGLVLPMWA 9
G +LP+WA
Sbjct: 270 FGNILPLWA 278


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 GLVLPMWAI 10
G ++P+W +
Sbjct: 1570 GTIVPLWIV 1578


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 GLVLPMWAI 10
G ++P+W +
Sbjct: 1570 GTIVPLWIV 1578


>sp|VG75_EHV2|PROBABLE membrane antigen 75|Equine herpesvirus 2 (strain 86/87)

Query: 2 GLVLPMWA 9
G +LP WA
Sbjct: 1229 GNILPCWA 1236




43|Sequence|211|220|PMWAIALISF

>sp|POL_SMRVH|GAG-PRO-POL polyprotein|Squirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Query: 3 WAIALISF 10
WAIAL SF
Sbjct: 1415 WAIALSSF 1422




44|Sequence|216|225|ALISFGVALL

***** No hits found ******


45|Sequence|221|230|GVALLFAFFV

>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GVALLFAFF 9
GV +LF FF
Sbjct: 827 GVLVLFGFF 835


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1 GVALLFAFF 9
G+ +LF FF
Sbjct: 827 GILVLFGFF 835


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 1 GVALLFAFFV 10
+A+LFAF++
Sbjct: 3219 AIAILFAFWL 3228




46|Sequence|226|235|FAFFVWLFVC

>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 1 FAFFVWLFV 9
F+FF WLF+
Sbjct: 196 FSFFDWLFM 204


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 1 FAFFVWLFV 9
F+FF WLF+
Sbjct: 196 FSFFDWLFM 204


>sp|VP7_RRSVT|MICROTUBULE-ASSOCIATED protein VP7|Rice ragged stunt virus (isolate

Query: 2 AFFVWLF 8
AFF WLF
Sbjct: 512 AFFSWLF 518


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1 FAFFVWLFVC 10
+ ++VWL +C
Sbjct: 1296 WPWYVWLLIC 1305


>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain

Query: 1 FAFFVWLFVC 10
+ ++VWL +C
Sbjct: 1292 WPWYVWLLIC 1301


>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 5 VWLFVC 10
+WLF+C
Sbjct: 517 LWLFMC 522


>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin

Query: 5 VWLFVC 10
VW+F C
Sbjct: 304 VWVFAC 309


>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)

Query: 5 VWLFVC 10
VW+F C
Sbjct: 304 VWVFAC 309


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 5 VWLFVC 10
VWL VC
Sbjct: 234 VWLHVC 239


>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25


>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 2 AFFVWLFV 9
+FFVW+ +
Sbjct: 18 SFFVWVII 25




47|Sequence|231|240|WLFVCPWMRR

>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 1 WLFVCPWMRR 10
WL +C W+ R
Sbjct: 394 WLLICKWLAR 403


>sp|DNBI_TUHV2|MAJOR DNA-binding protein|Tupaiid herpesvirus (strain 2) (TuHV-2)

Query: 1 WLFVCP 6
WLFVCP
Sbjct: 16 WLFVCP 21


>sp|GLYC_GOGV|GLYCOPROTEIN 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009)

Query: 3 FVCPWMRR 10
FVC W+R+
Sbjct: 420 FVCSWVRK 427


>sp|VE7_HPV45|PROTEIN E7|Human papillomavirus 45

Query: 3 FVCPW 7
FVCPW
Sbjct: 97 FVCPW 101


>sp|VE7_HPVME|PROTEIN E7|Human papillomavirus type ME180

Query: 3 FVCPW 7
FVCPW
Sbjct: 100 FVCPW 104


>sp|VE7_HPV18|PROTEIN E7|Human papillomavirus type 18

Query: 3 FVCPW 7
FVCPW
Sbjct: 96 FVCPW 100


>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68

Query: 3 FVCPW 7
FVCPW
Sbjct: 100 FVCPW 104


>sp|VE7_HPV70|PROTEIN E7|Human papillomavirus type 70

Query: 3 FVCPW 7
FVCPW
Sbjct: 99 FVCPW 103


>sp|MU2_REOVL|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 1 (strain Lang)

Query: 2 LFVCPWM 8
L +CPW+
Sbjct: 594 LLICPWL 600


>sp|MU2_REOVD|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 3 (strain Dearing)

Query: 2 LFVCPWM 8
L +CPW+
Sbjct: 594 LLICPWL 600


>sp|VE7_HPV39|PROTEIN E7|Human papillomavirus 39

Query: 3 FVCPW 7
FVCPW
Sbjct: 99 FVCPW 103


>sp|MU2_REOVJ|MICROTUBULE-ASSOCIATED protein mu-2|Reovirus type 2 (strain D5/Jones)

Query: 2 LFVCPWM 8
L +CPW+
Sbjct: 594 LMICPWL 600


>sp|VP4_ROTRA|OUTER capsid protein VP4|Rotavirus A (strain RVA/Rabbit/United

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 164 LCAWMKR 170


>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 164 LCAWMKR 170


>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 164 LCAWMKR 170


>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 163 LCAWMKR 169


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 164 LCAWMKR 170


>sp|VP4_ROTF1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 164 LCSWMKR 170


>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4 VCPWMRR 10
+C WM+R
Sbjct: 164 LCAWMKR 170


>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain

Query: 2 LFVCPWM 8
VCPW+
Sbjct: 1617 FIVCPWV 1623


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 4 VCPWM 8
VCPW+
Sbjct: 1622 VCPWV 1626


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 4 VCPWM 8
VCPW+
Sbjct: 1622 VCPWV 1626


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 4 VCPWM 8
VCPW+
Sbjct: 1622 VCPWV 1626


>sp|PK1_ASFWA|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 1 WLFVCP 6
W +VCP
Sbjct: 191 WEYVCP 196


>sp|PK1_ASFP4|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 1 WLFVCP 6
W +VCP
Sbjct: 191 WEYVCP 196


>sp|PK1_ASFM2|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 1 WLFVCP 6
W +VCP
Sbjct: 192 WEYVCP 197


>sp|PK1_ASFK5|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (isolate

Query: 1 WLFVCP 6
W +VCP
Sbjct: 192 WEYVCP 197


>sp|PK1_ASFB7|SERINE/THREONINE-PROTEIN kinase 1|African swine fever virus (strain

Query: 1 WLFVCP 6
W +VCP
Sbjct: 191 WEYVCP 196


>sp|VG11_SHV21|UNCHARACTERIZED gene 11 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 3 FVCPW 7
F CPW
Sbjct: 264 FSCPW 268


>sp|TEG5_PSHV1|TEGUMENT protein UL47 homolog|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 LFVCPWMR 9
LF+ PW R
Sbjct: 288 LFIWPWAR 295


>sp|NS1AB_MASV1|NON-STRUCTURAL polyprotein 1AB|Mink astrovirus 1 (MAstV-1)

Query: 1 WLFVCPWMRR 10
W F C +RR
Sbjct: 972 WKFACQVLRR 981


>sp|POLN_GFKVM|NON-STRUCTURAL replication polyprotein|Grapevine fleck virus (isolate Italy/MT48)

Query: 3 FVCPWMRR 10
F C W RR
Sbjct: 1173 FYCLWTRR 1180


>sp|NS1_FPV|INITIATOR protein NS1|Feline panleukopenia virus (FPV)

Query: 1 WLFVCPWM 8
W +C W+
Sbjct: 256 WPLICAWL 263


>sp|NS1_PAVPN|INITIATOR protein NS1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 1 WLFVCPWM 8
W +C W+
Sbjct: 530 WPLICAWL 537


>sp|NS1_PAVPK|INITIATOR protein NS1|Porcine parvovirus (strain Kresse) (PPV)

Query: 1 WLFVCPWM 8
W +C W+
Sbjct: 530 WPLICAWL 537


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 WLFVCPWMRR 10
WL V WM R
Sbjct: 254 WLMVDSWMAR 263


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 WLFVCPWM 8
W+ PWM
Sbjct: 3308 WILENPWM 3315


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1 WLFVCPWM 8
W+ PWM
Sbjct: 3305 WILENPWM 3312




48|Sequence|236|245|PWMRRKITGK

>sp|LMBD2_REOVJ|OUTER capsid protein lambda-2|Reovirus type 2 (strain D5/Jones)

Query: 1 PWMRRKITG 9
PW++ KI+G
Sbjct: 531 PWLQGKISG 539


>sp|CAPSD_MYRV9|INNER capsid protein VP2|Cryphonectria parasitica mycoreovirus 1 (strain

Query: 1 PWMRRKI 7
PW RR+I
Sbjct: 293 PWFRREI 299


>sp|LMBD2_REOVD|OUTER capsid protein lambda-2|Reovirus type 3 (strain Dearing)

Query: 1 PWMRRKITG 9
PW++ KI+G
Sbjct: 532 PWIQGKISG 540


>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P

Query: 1 PWMRRKITG 9
PW+R+K G
Sbjct: 160 PWLRKKWHG 168


>sp|LMBD2_REOVL|OUTER capsid protein lambda-2|Reovirus type 1 (strain Lang)

Query: 1 PWMRRKITG 9
PW + KI+G
Sbjct: 532 PWTQGKISG 540


>sp|HOL24_BPSPP|HOLIN-LIKE protein 24.1|Bacillus phage SPP1 (Bacteriophage SPP1)

Query: 2 WMRRKITG 9
W++R ITG
Sbjct: 52 WIKRTITG 59


>sp|VF350_IIV6|UNCHARACTERIZED protein 350L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 WMRRKITG 9
W R KITG
Sbjct: 52 WDRHKITG 59


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain

Query: 1 PWMRRK 6
PW+R+K
Sbjct: 36 PWLRKK 41


>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1 PWMRRK 6
PW+R+K
Sbjct: 36 PWLRKK 41




49|Sequence|241|250|KITGKLQKEG

>sp|L_CPSVP|RNA-DIRECTED RNA polymerase L|Citrus psorosis virus (isolate Spain/P-121)

Query: 1 KITGKLQK 8
KITGK+QK
Sbjct: 226 KITGKMQK 233


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 KITGKLQKEG 10
K+T L KEG
Sbjct: 752 KVTNALTKEG 761


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 KITGKLQKEG 10
K+T L KEG
Sbjct: 752 KVTNALTKEG 761


>sp|REP_PCV2|REPLICATION-ASSOCIATED protein|Porcine circovirus 2 (PCV2)

Query: 1 KITGKLQK 8
K++GK+QK
Sbjct: 155 KVSGKMQK 162




50|Sequence|246|255|LQKEGALSRV

>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQKEGALSRV 10
++KEG +SRV
Sbjct: 629 MEKEGKISRV 638


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LQKEGALSRV 10
L++EG LSRV
Sbjct: 655 LEEEGKLSRV 664


>sp|POL_SIVMB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate MB66)

Query: 1 LQKEGALSRV 10
++KEG +SRV
Sbjct: 627 MEKEGKISRV 636


>sp|Y05B_BPT4|UNCHARACTERIZED 31.7 kDa protein in|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 LQKEGALSRV 10
L K GALSR+
Sbjct: 90 LNKIGALSRI 99


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQKEGALSRV 10
++KEG +SR+
Sbjct: 638 MEKEGKISRI 647


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQKEGALSRV 10
++KEG +SR+
Sbjct: 638 MEKEGKISRI 647


>sp|POL_SIVEK|GAG-POL polyprotein|Simian immunodeficiency virus (isolate EK505)

Query: 1 LQKEGALSRV 10
++KEG +SR+
Sbjct: 637 MEKEGKISRI 646


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQKEGALSRV 10
++KEG +SR+
Sbjct: 625 MEKEGKISRI 634


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQKEGALSRV 10
++KEG +SR+
Sbjct: 628 MEKEGKISRI 637


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 LQKEGALSRV 10
++KEG +SR+
Sbjct: 628 MEKEGKISRI 637


>sp|POL_SIVVT|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 LQKEGALSRV 10
L++EG +SRV
Sbjct: 659 LEQEGKISRV 668


>sp|POL_SIVGB|GAG-POL polyprotein|Simian immunodeficiency virus (isolate GB1)

Query: 1 LQKEGALSRV 10
L++EG +SRV
Sbjct: 637 LEEEGKISRV 646


>sp|POL_SIVG1|GAG-POL polyprotein|Simian immunodeficiency virus agm.grivet (isolate

Query: 1 LQKEGALSRV 10
+++EG LSR+
Sbjct: 650 MEEEGKLSRI 659




51|Sequence|251|260|ALSRVSDESL

>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P

Query: 1 ALSRVSDESL 10
ALSRVS ESL
Sbjct: 243 ALSRVSLESL 252




52|Sequence|256|265|SDESLSKVQE

***** No hits found ******


53|Sequence|261|270|SKVQEAESPV

>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 SKVQEAESPV 10
SK+ E E PV
Sbjct: 254 SKIAEIEDPV 263


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 SKVQEAESPV 10
SK+ E E PV
Sbjct: 254 SKIAEIEDPV 263




54|Sequence|266|275|AESPVFKELP

>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 ESPVFKEL 9
ESP+FK L
Sbjct: 383 ESPIFKRL 390


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 2 ESPVFKEL 9
ESP+FK L
Sbjct: 383 ESPIFKRL 390


>sp|FIBL1_BPT5|SIDE tail fiber protein pb1|Escherichia phage T5 (Enterobacteria phage

Query: 2 ESPVFKELP 10
E+P++K +P
Sbjct: 1355 ENPIYKTIP 1363




55|Sequence|271|280|FKELPGAKAN

>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1 FKELPGAKAN 10
FK PG+KAN
Sbjct: 1119 FKSHPGSKAN 1128


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 2 KELPGAKAN 10
+ELPG+ AN
Sbjct: 211 RELPGSTAN 219


>sp|MB43_EHV1V|MEMBRANE protein UL43 homolog|Equine herpesvirus 1 (strain V592)

Query: 1 FKELPG 6
FKE+PG
Sbjct: 255 FKEMPG 260


>sp|MB43_EHV1B|MEMBRANE protein UL43 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 FKELPG 6
FKE+PG
Sbjct: 255 FKEMPG 260


>sp|POLG_TMEVG|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 FKELPGAK 8
F E+PG+K
Sbjct: 1452 FDEIPGSK 1459


>sp|POLG_TMEVD|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 FKELPGAK 8
F E+PG+K
Sbjct: 1450 FDEIPGSK 1457


>sp|POLG_TMEVB|GENOME polyprotein|Theiler's murine encephalomyelitis virus (strain

Query: 1 FKELPGAK 8
F E+PG+K
Sbjct: 1452 FDEIPGSK 1459


>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)

Query: 2 KELPGAKAN 10
+ELPG +A+
Sbjct: 224 RELPGGRAS 232


>sp|VG59_EHV2|DNA polymerase processivity factor|Equine herpesvirus 2 (strain 86/87)

Query: 1 FKELPG 6
FKE+PG
Sbjct: 347 FKEIPG 352


>sp|IORF_CVMS|PROTEIN I|Murine coronavirus (strain S) (MHV-S)

Query: 2 KELPGAKAN 10
KEL G++AN
Sbjct: 125 KELSGSQAN 133


>sp|IORF_CVMJH|PROTEIN I|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 KELPGAKAN 10
KEL G++AN
Sbjct: 125 KELSGSQAN 133




56|Sequence|276|285|GAKANDDSTI

>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 1 GAKANDDS 8
G+KAN DS
Sbjct: 417 GSKANPDS 424




57|Sequence|281|290|DDSTIPLTGA

>sp|RDRP_NMV|RNA replication protein|Narcissus mosaic virus (NMV)

Query: 1 DDSTIPL 7
DDST+PL
Sbjct: 625 DDSTLPL 631


>sp|BPJ_BPP2|BASEPLATE protein J|Escherichia phage P2 (Bacteriophage P2)

Query: 1 DDSTIPLTGA 10
DDSTIP T A
Sbjct: 107 DDSTIPPTPA 116


>sp|HELI1_SFAVA|PUTATIVE ATP-dependent RNA helicase|Spodoptera frugiperda ascovirus 1a

Query: 1 DDSTIPL 7
DD+TIPL
Sbjct: 640 DDNTIPL 646


>sp|L_LBVAV|RNA-DIRECTED RNA polymerase L|Lettuce big-vein associated virus (isolate

Query: 4 TIPLTG 9
TIPLTG
Sbjct: 887 TIPLTG 892


>sp|VIEG_SHV21|IMMEDIATE-EARLY protein IE-G|Saimiriine herpesvirus 2 (strain 11)

Query: 1 DDSTIPLTGA 10
DD +P TGA
Sbjct: 160 DDPPLPYTGA 169




58|Sequence|286|295|PLTGAAGETL

>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 PLTGAAGE 8
PL+G++GE
Sbjct: 247 PLSGSSGE 254


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 PLTGAAGE 8
PL+G++GE
Sbjct: 247 PLSGSSGE 254


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 PLTGAAGE 8
PL+G++GE
Sbjct: 247 PLSGSSGE 254


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 TGAAGETL 10
TGA GETL
Sbjct: 2495 TGAQGETL 2502


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3 TGAAGETL 10
TGA GETL
Sbjct: 2495 TGAQGETL 2502


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 1 PLTGAAGETL 10
PLT AG TL
Sbjct: 2 PLTARAGHTL 11




59|Sequence|291|300|AGETLGTSEG

>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)

Query: 1 AGETLGTSE 9
A +T+GTSE
Sbjct: 344 ASKTIGTSE 352


>sp|YR831_MIMIV|PUTATIVE serine/threonine-protein kinase/receptor R831|Acanthamoeba

Query: 2 GETLGT 7
GETLGT
Sbjct: 789 GETLGT 794




60|Sequence|296|305|GTSEGTSAGS

>sp|C_SENDZ|C' protein|Sendai virus (strain Z) (SeV)

Query: 2 TSEGTSAGS 10
TSEGT AGS
Sbjct: 50 TSEGTEAGS 58


>sp|C_SENDN|PROTEIN C'|Sendai virus (strain Nagoya) (SeV)

Query: 2 TSEGTSAGS 10
TSEGT AGS
Sbjct: 50 TSEGTEAGS 58


>sp|C_SENDH|PROTEIN C'|Sendai virus (strain Harris) (SeV)

Query: 2 TSEGTSAGS 10
TSEGT AGS
Sbjct: 50 TSEGTEAGS 58


>sp|C_SENDF|PROTEIN C'|Sendai virus (strain Fushimi) (SeV)

Query: 2 TSEGTSAGS 10
TSEGT AGS
Sbjct: 50 TSEGTEAGS 58


>sp|C_SEND6|PROTEIN C'|Sendai virus (strain 6/94) (SeV)

Query: 2 TSEGTSAGS 10
TSEGT AGS
Sbjct: 50 TSEGTEAGS 58


>sp|C_SENDO|PROTEIN C'|Sendai virus (strain Ohita) (SeV)

Query: 2 TSEGTSAGS 10
TSEGT AGS
Sbjct: 50 TSEGTEAGS 58


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 1 GTSEGTS 7
GTSEGTS
Sbjct: 2852 GTSEGTS 2858


>sp|C_SENDA|PROTEIN C'|Sendai virus (strain Hamamatsu) (SeV)

Query: 2 TSEGTSAGS 10
TSE T AGS
Sbjct: 50 TSEETEAGS 58




61|Sequence|301|310|TSAGSHPRAA

>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 TSAGSHPRA 9
T+AG HP A
Sbjct: 2214 TTAGKHPDA 2222




62|Sequence|306|315|HPRAAYGRAL

>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 2 PRAAYGRAL 10
PR AYGRAL
Sbjct: 1176 PRCAYGRAL 1184


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 2 PRAAYGRAL 10
P+ AYGRAL
Sbjct: 1176 PKCAYGRAL 1184


>sp|053R_FRG3G|PUTATIVE myristoylated protein 053R|Frog virus 3 (isolate Goorha)

Query: 2 PRAAYGRA 9
PRAAYG A
Sbjct: 341 PRAAYGYA 348


>sp|1A_OLV2I|REPLICATION protein 1a|Olive latent virus 2 (isolate

Query: 1 HPRAAYGR 8
HP AAY R
Sbjct: 75 HPFAAYSR 82


>sp|RPOA_PRRSL|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 2 PRAAYGRA 9
P A YGRA
Sbjct: 3820 PHAIYGRA 3827




63|Sequence|311|320|YGRALSMTHG

>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)

Query: 3 RALSMTH 9
RALSMTH
Sbjct: 258 RALSMTH 264


>sp|ACB1_BPT4|ANTI-CBASS protein Acb1|Enterobacteria phage T4 (Bacteriophage T4)

Query: 1 YGRALSMTH 9
Y RAL TH
Sbjct: 97 YARALGATH 105


>sp|ACB1_BPSP8|ANTI-CBASS protein Acb1|Shigella phage SP18

Query: 1 YGRALSMTH 9
Y RAL TH
Sbjct: 96 YARALGATH 104


>sp|ACB1_BPS16|ANTI-CBASS protein Acb1|Salmonella phage S16 (Salmonella phage

Query: 1 YGRALSMTH 9
Y RAL TH
Sbjct: 97 YARALGATH 105




64|Sequence|316|325|SMTHGSVKSP

>sp|PHOSP_NDVU2|PHOSPHOPROTEIN disease virus (strain Ulster/2C)

Query: 4 HGSVKSP 10
HGSV+SP
Sbjct: 54 HGSVQSP 60


>sp|V_NDVU2|NON-STRUCTURAL protein V|Newcastle disease virus (strain Ulster/2C)

Query: 4 HGSVKSP 10
HGSV+SP
Sbjct: 54 HGSVQSP 60




65|Sequence|321|330|SVKSPISNGT

>sp|TEV3_BPR03|INTRON-ASSOCIATED endonuclease 3|Enterobacteria phage RB3 (Bacteriophage RB3)

Query: 1 SVKSPISNGT 10
S+KS I NGT
Sbjct: 103 SIKSKIENGT 112


>sp|VEAA_BPP22|EAA protein|Salmonella phage P22 (Bacteriophage P22)

Query: 2 VKSPISNG 9
VKSP+ NG
Sbjct: 13 VKSPLENG 20


>sp|VG12_BPP22|REPLICATIVE DNA helicase|Salmonella phage P22 (Bacteriophage P22)

Query: 2 VKSPISNGT 10
++ PISNGT
Sbjct: 109 MREPISNGT 117


>sp|POLS_ABPVR|STRUCTURAL polyprotein|Acute bee paralysis virus (strain

Query: 2 VKSPISNG 9
V++PISNG
Sbjct: 473 VQAPISNG 480




66|Sequence|326|335|ISNGTFGFDG

>sp|POLG_BTMV|GENOME polyprotein|Beet mosaic virus (BtMV)

Query: 1 ISNGTFGFDG 10
+SN FG DG
Sbjct: 3046 VSNKLFGLDG 3055


>sp|POLG_PSBMV|GENOME polyprotein|Pea seed-borne mosaic virus (strain

Query: 2 SNGTFGFDG 10
SN FG DG
Sbjct: 3168 SNSLFGLDG 3176


>sp|LEF8_NPVAC|PROBABLE DNA-directed RNA polymerase catalytic|Autographa californica

Query: 3 NGTFGFDG 10
NGTF DG
Sbjct: 88 NGTFMLDG 95


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1 ISNGTFGFDG 10
+SN TF DG
Sbjct: 891 VSNNTFHVDG 900


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 4 GTFGFDG 10
G+F FDG
Sbjct: 79 GSFAFDG 85


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 4 GTFGFDG 10
G+F FDG
Sbjct: 79 GSFAFDG 85


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 4 GTFGFDG 10
G+F FDG
Sbjct: 79 GSFAFDG 85


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 4 GTFGFDG 10
G+F FDG
Sbjct: 79 GSFAFDG 85


>sp|POLG_PWVTB|GENOME polyprotein|Passionfruit woodiness virus (strain Tip

Query: 1 ISNGTFGFDG 10
++N FG DG
Sbjct: 229 VTNKLFGLDG 238


>sp|POLG_PWVSE|GENOME polyprotein|Passionfruit woodiness virus (strain Severe)

Query: 1 ISNGTFGFDG 10
++N FG DG
Sbjct: 229 VTNKLFGLDG 238


>sp|POLG_CYVV|GENOME polyprotein|Clover yellow vein virus

Query: 2 SNGTFGFDG 10
SN FG DG
Sbjct: 354 SNHMFGLDG 362


>sp|POLN_TYMVC|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus (isolate

Query: 1 ISNGTFGFDG 10
ISN GFDG
Sbjct: 924 ISNMKNGFDG 933


>sp|POLN_TYMV|NON-STRUCTURAL replication polyprotein|Turnip yellow mosaic virus

Query: 1 ISNGTFGFDG 10
ISN GFDG
Sbjct: 924 ISNMKNGFDG 933


>sp|POLN_OYMV|NON-STRUCTURAL replication polyprotein|Ononis yellow mosaic virus

Query: 1 ISNGTFGFDG 10
ISN GFDG
Sbjct: 851 ISNMKNGFDG 860


>sp|POLN_KYMVJ|NON-STRUCTURAL replication polyprotein|Kennedya yellow mosaic virus (strain

Query: 1 ISNGTFGFDG 10
ISN GFDG
Sbjct: 950 ISNMKNGFDG 959


>sp|POLN_EPMV|NON-STRUCTURAL replication polyprotein|Eggplant mosaic virus

Query: 1 ISNGTFGFDG 10
ISN GFDG
Sbjct: 916 ISNMKNGFDG 925


>sp|POLG_MRFVC|GENOME polyprotein|Maize rayado fino virus (isolate

Query: 1 ISNGTFGFDG 10
ISN GFDG
Sbjct: 864 ISNMKNGFDG 873


>sp|VF022_IIV3|PUTATIVE helicase 087L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 ISNGTFGFDG 10
+SN ++GF G
Sbjct: 842 VSNNSYGFIG 851


>sp|POLG_PWVMI|GENOME polyprotein|Passionfruit woodiness virus (strain Mild)

Query: 1 ISNGTFGFDG 10
++N FG DG
Sbjct: 229 VTNKLFGLDG 238


>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)

Query: 1 ISNGTFGFD 9
ISNG F F+
Sbjct: 667 ISNGLFDFN 675


>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 ISNGTFGFD 9
ISNG F F+
Sbjct: 667 ISNGLFDFN 675


>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)

Query: 1 ISNGTFGF-DG 10
+S+GTFG DG
Sbjct: 145 VSDGTFGMVDG 155


>sp|POLG_SBMVN|GENOME polyprotein|Soybean mosaic virus (strain N)

Query: 1 ISNGTFGFDG 10
++N FG DG
Sbjct: 3026 VNNKLFGLDG 3035


>sp|POLG_SBMVG|GENOME polyprotein|Soybean mosaic virus (strain G2)

Query: 1 ISNGTFGFDG 10
++N FG DG
Sbjct: 3026 VNNKLFGLDG 3035


>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 SNGTFG 7
SNGTFG
Sbjct: 121 SNGTFG 126


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 3 NGTFGFDG 10
NGTF DG
Sbjct: 900 NGTFIIDG 907


>sp|RDRP_CMVIX|RNA-DIRECTED RNA polymerase 2a|Cucumber mosaic virus (strain Ixora)

Query: 3 NGTFGFD 9
NGT+G D
Sbjct: 15 NGTYGVD 21


>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 SNGTFG 7
SNGTFG
Sbjct: 122 SNGTFG 127


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1 ISNGTFGFDG 10
+SN TF DG
Sbjct: 916 MSNNTFVIDG 925


>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956

Query: 1 ISNGTFG 7
+ NGTFG
Sbjct: 125 LKNGTFG 131


>sp|GLYCO_VHSV0|SPIKE glycoprotein|Viral hemorrhagic septicemia virus (strain

Query: 1 ISNGTFGFDG 10
+ N T G+DG
Sbjct: 387 VDNNTDGYDG 396




67|Sequence|331|340|FGFDGHTRSD

>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 2 GFDGHTR 8
G DGHTR
Sbjct: 912 GVDGHTR 918


>sp|YL357_MIMIV|UNCHARACTERIZED protein L357|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 FGFDGHT 7
FGF GHT
Sbjct: 145 FGFMGHT 151


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 FGFDGH 6
F FDGH
Sbjct: 420 FSFDGH 425


>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_VACCW|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Western Reserve)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_RABPU|TELOMERE-BINDING protein OPG077|Rabbitpox virus (strain Utrecht) (RPV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)

Query: 1 FGFDGHT 7
F F+GHT
Sbjct: 142 FNFNGHT 148


>sp|SHUT_GAHVM|VIRION host shutoff protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 2 GFDGHTRSD 10
GFD H R D
Sbjct: 303 GFDLHIRKD 311


>sp|VT2_MYXVL|TUMOR necrosis factor soluble receptor|Myxoma virus (strain Lausanne)

Query: 1 FGFDGHTRS 9
+G GHTR+
Sbjct: 133 YGVSGHTRT 141


>sp|VT2_RFVKA|TUMOR necrosis factor soluble receptor|Rabbit fibroma virus (strain

Query: 1 FGFDGHTRS 9
+G GHTR+
Sbjct: 133 YGVSGHTRA 141


>sp|YL666_MIMIV|UNCHARACTERIZED protein L666|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FDGHT 7
FDGHT
Sbjct: 200 FDGHT 204


>sp|POL_SINV3|POLYPROTEIN invicta virus 3 (SINV-3)

Query: 1 FGFDGHT 7
GFDG+T
Sbjct: 723 LGFDGYT 729


>sp|POLFS_SINV3|POLYPROTEIN-FSD invicta virus 3 (SINV-3)

Query: 1 FGFDGHT 7
GFDG+T
Sbjct: 723 LGFDGYT 729




68|Sequence|336|345|HTRSDGHVYH

>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 5 DGHVYH 10
DGHVYH
Sbjct: 709 DGHVYH 714


>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 TRSDGHVYH 10
T SDG +YH
Sbjct: 122 TGSDGKLYH 130


>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain

Query: 2 TRSDGHVYH 10
T SDG +YH
Sbjct: 122 TGSDGKLYH 130


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 2 TRSDGHVYH 10
T SDG +YH
Sbjct: 122 TGSDGKLYH 130


>sp|POLG_BVDVN|GENOME polyprotein|Bovine viral diarrhea virus (isolate

Query: 2 TRSDGHVYH 10
T SDG +YH
Sbjct: 122 TGSDGKLYH 130


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 3 RSDGHVYH 10
R GH+YH
Sbjct: 839 RFGGHIYH 846


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 5 DGHVYH 10
+GH+YH
Sbjct: 202 EGHIYH 207


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 5 DGHVYH 10
+GH+YH
Sbjct: 201 EGHIYH 206


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 HTRSDGHVY 9
HTR DG Y
Sbjct: 1299 HTRRDGDRY 1307


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 HTRSDGHVY 9
HTR DG Y
Sbjct: 1299 HTRRDGDRY 1307


>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 HTRSDGHVY 9
HT D H+Y
Sbjct: 238 HTMGDAHIY 246


>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 HTRSDGHVY 9
HT D H+Y
Sbjct: 238 HTMGDAHIY 246


>sp|V143_NPVOP|ATP-DEPENDENT DNA helicase P143|Orgyia pseudotsugata multicapsid polyhedrosis virus

Query: 1 HTRSDGHVYH 10
H R G VYH
Sbjct: 1040 HVRFSGSVYH 1049


>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P

Query: 1 HTRSDGHVY 9
HT D H+Y
Sbjct: 274 HTLGDAHIY 282


>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)

Query: 1 HTRSDGHVYH 10
H RSDG +++
Sbjct: 821 HIRSDGCIWN 830


>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 6 GHVYH 10
GH+YH
Sbjct: 426 GHIYH 430


>sp|BPD_BPP2|PROBABLE baseplate hub protein|Escherichia phage P2 (Bacteriophage P2)

Query: 2 TRSDGHVYH 10
TRSDG +H
Sbjct: 207 TRSDGDRHH 215


>sp|V42_BPT3|GENE 4.2 protein|Enterobacteria phage T3 (Bacteriophage T3)

Query: 1 HTRSDGHVYH 10
H+ DG +YH
Sbjct: 100 HSDCDGIMYH 109


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3 RSDGHVYH 10
R DG YH
Sbjct: 872 RGDGKTYH 879


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1 HTRSDGHVY 9
HTR H+Y
Sbjct: 79 HTRMKFHIY 87


>sp|P4H_MIMIV|PUTATIVE prolyl 4-hydroxylase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 4 SDGHVY 9
SDGH Y
Sbjct: 180 SDGHTY 185


>sp|TYSY_HSVAT|THYMIDYLATE synthase|Herpesvirus ateles

Query: 1 HTRSDGHVY 9
HT D HVY
Sbjct: 227 HTLGDAHVY 235


>sp|HEMA_I80A8|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/833/1980

Query: 2 TRSDGHVY 9
T+SDG+ Y
Sbjct: 167 TKSDGNAY 174


>sp|HEMA_I85A7|HEMAGGLUTININ A virus (strain A/Ruddy

Query: 2 TRSDGHVY 9
T+SDG+ Y
Sbjct: 167 TKSDGNAY 174


>sp|HEMA_I75A4|HEMAGGLUTININ A virus (strain A/Chicken/Alabama/1/1975

Query: 2 TRSDGHVY 9
T+SDG+ Y
Sbjct: 167 TKSDGNAY 174


>sp|TYSY_IIV6|PROBABLE thymidylate synthase 225R|Invertebrate iridescent virus 6 (IIV-6)

Query: 1 HTRSDGHVY 9
HT S+ H+Y
Sbjct: 232 HTLSNVHIY 240




69|Sequence|341|350|GHVYHTVHKD

>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 HVYHTVHKD 10
HV HT HK+
Sbjct: 4903 HVMHTDHKN 4911


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 HVYHTVHKD 10
HV HT HK+
Sbjct: 4901 HVMHTDHKN 4909


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 HVYHTVHKD 10
HV HT HK+
Sbjct: 4901 HVMHTDHKN 4909


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 GHVYHTVHKD 10
GH+Y T H +
Sbjct: 1923 GHLYETFHAN 1932


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 GHVYHTVHKD 10
GH+Y T H +
Sbjct: 1923 GHLYETFHAN 1932


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 GHVYHTVHKD 10
GH+Y T H +
Sbjct: 1923 GHLYETFHAN 1932


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 GHVYHTVHKD 10
GH+YH +D
Sbjct: 842 GHIYHLNSQD 851


>sp|LEF5_NPVAC|LATE expression factor 5|Autographa californica nuclear polyhedrosis

Query: 1 GHVYHTVH 8
GH++H++H
Sbjct: 71 GHLFHSLH 78


>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 GHVYHTVHKD 10
GH+YH + D
Sbjct: 426 GHIYHLKYVD 435


>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)

Query: 3 VYHTVHK 9
+YH+VHK
Sbjct: 943 LYHSVHK 949


>sp|CAPSD_APRVF|INNER capsid protein VP3|Aedes pseudoscutellaris reovirus (isolate

Query: 1 GHVYH 5
GHVYH
Sbjct: 710 GHVYH 714


>sp|L_TAVCV|RNA-DIRECTED RNA polymerase L|Taro vein chlorosis virus (TAVCV)

Query: 4 YHTVHK 9
YH+VHK
Sbjct: 399 YHSVHK 404


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 1 GHVYHTVHK 9
G +YH +H+
Sbjct: 313 GFIYHILHR 321


>sp|SPIKE_BCHK4|SPIKE glycoprotein|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 3 VYHTVHKD 10
+Y TVH D
Sbjct: 212 IYETVHND 219


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 2 HVYHTVHK 9
V+H VHK
Sbjct: 90 QVFHNVHK 97


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 GHVYHTVHKD 10
G++YH+ + D
Sbjct: 329 GYIYHSAYVD 338


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 GHVYHTVHKD 10
G++YH+ + D
Sbjct: 329 GYIYHSAYVD 338


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 GHVYHTVHKD 10
G++YH+ + D
Sbjct: 329 GYIYHSAYVD 338


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32

Query: 1 GHVYHTVHK 9
GH Y+T+ K
Sbjct: 46 GHPYYTIKK 54


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 GHVYHTVHKD 10
G++YH+ + D
Sbjct: 329 GYIYHSAYVD 338


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 1 GHVYH 5
GH+YH
Sbjct: 203 GHIYH 207


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1 GHVYH 5
GH+YH
Sbjct: 202 GHIYH 206


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2 HVYHTVHKD 10
HV HT H D
Sbjct: 380 HVCHTKHMD 388


>sp|SPIKE_BC133|SPIKE glycoprotein|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 3 VYHTVHKD 10
+Y T+H D
Sbjct: 212 IYETIHSD 219


>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 VYHTVH 8
V+HT+H
Sbjct: 24 VFHTIH 29


>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 VYHTVH 8
V+HT+H
Sbjct: 24 VFHTIH 29


>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 VYHTVH 8
V+HT+H
Sbjct: 24 VFHTIH 29


>sp|A11_FOWPN|PROTEIN A11 homolog|Fowlpox virus (strain NVSL) (FPV)

Query: 4 YHTVHK 9
YH VHK
Sbjct: 189 YHEVHK 194


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2 HVYHTVHKD 10
H+ HT H D
Sbjct: 380 HICHTKHMD 388




70|Sequence|346|355|TVHKDSGLYK

>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 1 TVHKDSG 7
TVH+D+G
Sbjct: 25 TVHRDAG 31


>sp|NSP3_ROTJ1|NON-STRUCTURAL protein 3|Rotavirus X (strain

Query: 1 TVHKDSGLY 9
T+ +DSGLY
Sbjct: 32 TMIRDSGLY 40


>sp|TEG7_HHV7J|TEGUMENT protein UL51 homolog|Human herpesvirus 7 (strain JI)

Query: 2 VHKDSGLYK 10
+H+++GLY+
Sbjct: 169 LHQETGLYQ 177


>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 VHKDSGLYK 10
+H+++GLY+
Sbjct: 171 LHEETGLYQ 179


>sp|MTC1_PBCVI|TYPE II methyltransferase M.CviJI|Paramecium bursaria Chlorella virus

Query: 3 HKDSGLY 9
HK+SGL+
Sbjct: 87 HKESGLF 93


>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)

Query: 2 VHKDSGLYK 10
+H+++GLY+
Sbjct: 179 LHEETGLYQ 187




71|Sequence|351|360|SGLYKDLLHK

>sp|MCP_GAHVM|MAJOR capsid protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 SGLYKDLLH 9
+ +YKDL+H
Sbjct: 704 TNVYKDLMH 712


>sp|5052R_ASFK5|PROTEIN MGF 505-2R|African swine fever virus (isolate

Query: 2 GLYKDLLH 9
G+YK+LLH
Sbjct: 418 GIYKNLLH 425


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 2 GLYKDLLH 9
GLY+ LLH
Sbjct: 796 GLYRPLLH 803


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 2 GLYKDLLH 9
GLY+ LLH
Sbjct: 796 GLYRPLLH 803


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 2 GLYKDLLH 9
GLY+ LLH
Sbjct: 796 GLYRPLLH 803


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 2 GLYKDLLH 9
GLY+ LLH
Sbjct: 791 GLYRPLLH 798


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 2 GLYKDLLH 9
GLY+ LLH
Sbjct: 796 GLYRPLLH 803


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 SGLYKDLLHK 10
+GL+ D++H+
Sbjct: 2016 AGLFHDVMHQ 2025


>sp|PRO_ADEG1|PROTEASE adenovirus A serotype 1

Query: 4 YKDLLHK 10
Y+D+LH+
Sbjct: 163 YRDILHR 169


>sp|POLN_GFKVM|NON-STRUCTURAL replication polyprotein|Grapevine fleck virus (isolate Italy/MT48)

Query: 4 YKDLLHK 10
Y DLLH+
Sbjct: 645 YSDLLHR 651


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 3 LYKDLLHK 10
L++DL+HK
Sbjct: 84 LHQDLIHK 91


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 3 LYKDLLHK 10
L++DL+HK
Sbjct: 84 LHQDLIHK 91


>sp|SCAF_SHV21|CAPSID scaffolding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 SGLYKDLLH 9
S LYKD+L+
Sbjct: 345 SSLYKDVLN 353


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 3 LYKDLLHK 10
LYKDL+ K
Sbjct: 487 LYKDLMEK 494




72|Sequence|356|365|DLLHKIHIDR

>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 1 DLLHKIHID 9
+LLH +H+D
Sbjct: 539 ELLHALHLD 547


>sp|E1B55_ADET1|E1B 55 kDa protein|Tree shrew adenovirus serotype 1

Query: 2 LLHKIHI 8
LLH IHI
Sbjct: 265 LLHTIHI 271


>sp|Y049_OSHVF|UNCHARACTERIZED protein ORF49|Ostreid herpesvirus 1 (isolate France)

Query: 1 DLLHKIHIDR 10
D LH++H+ R
Sbjct: 951 DHLHRVHMSR 960


>sp|MP1_MCMVK|PROTEIN p31|Maize chlorotic mottle virus (isolate

Query: 1 DLLHKIHID 9
DLL +H+D
Sbjct: 92 DLLDSVHLD 100


>sp|YL171_MIMIV|UNCHARACTERIZED protein L171|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DLLHKIHI 8
D LHKIHI
Sbjct: 71 DSLHKIHI 78


>sp|D63_SSV1|PROTEIN D-63|Sulfolobus spindle-shape virus 1 (SSV1)

Query: 2 LLHKIHIDR 10
L+H+I IDR
Sbjct: 24 LIHEIKIDR 32




73|Sequence|361|370|IHIDRGPEEK

>sp|ENV_BIV29|ENVELOPE glycoprotein|Bovine immunodeficiency virus (strain R29)

Query: 2 HIDRGPEE 9
H D GPEE
Sbjct: 652 HFDFGPEE 659


>sp|VP75_SHV21|PROBABLE membrane antigen 75|Saimiriine herpesvirus 2 (strain 11)

Query: 1 IHIDRGPEE 9
+HI R PEE
Sbjct: 461 VHISRLPEE 469


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 DRGPEEK 10
D GPEEK
Sbjct: 2375 DSGPEEK 2381


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 DRGPEEK 10
D GPEEK
Sbjct: 2375 DSGPEEK 2381


>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)

Query: 2 HIDRGP 7
H+DRGP
Sbjct: 274 HLDRGP 279


>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)

Query: 2 HIDRGP 7
H+DRGP
Sbjct: 274 HLDRGP 279


>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)

Query: 2 HIDRGP 7
H+DRGP
Sbjct: 274 HLDRGP 279


>sp|POLG_PRSVH|GENOME polyprotein|Papaya ringspot virus (strain P

Query: 2 HIDRGP 7
HID+GP
Sbjct: 816 HIDQGP 821


>sp|POL1_BBWV2|RNA1 polyprotein|Broad bean wilt virus 2

Query: 3 IDRGPEEK 10
+DRGP +K
Sbjct: 1321 LDRGPGDK 1328


>sp|MVP_PRSVH|P3N-PIPO polyprotein|Papaya ringspot virus (strain P

Query: 2 HIDRGP 7
HID+GP
Sbjct: 816 HIDQGP 821


>sp|MMP_HVAVE|PUTATIVE matrix metalloproteinase|Heliothis virescens ascovirus 3e

Query: 1 IHIDRGPEE 9
IH +GPE+
Sbjct: 51 IHASQGPEK 59




74|Sequence|366|375|GPEEKPAQES

>sp|POL1_CRLVP|RNA1 polyprotein|Cherry rasp leaf virus (isolate

Query: 1 GPEEKPAQ 8
GPEE+P+Q
Sbjct: 1319 GPEEEPSQ 1326


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1 GPEEKPAQE 9
GP E PA E
Sbjct: 19 GPVENPAAE 27


>sp|YL116_MIMIV|UNCHARACTERIZED protein L116|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 PEEKPAQE 9
PEEKP++E
Sbjct: 36 PEEKPSEE 43


>sp|POLG_FMDS2|GENOME polyprotein|Foot-and-mouth disease virus serotype SAT-2

Query: 2 PEEKPAQE 9
PEEKP E
Sbjct: 1574 PEEKPQAE 1581


>sp|GB_EHV4|ENVELOPE glycoprotein B|Equine herpesvirus 4 (strain 1942)

Query: 2 PEEKPAQES 10
PE P QES
Sbjct: 466 PEPTPTQES 474




75|Sequence|371|380|PAQESNYRLL

***** No hits found ******


76|Sequence|376|385|NYRLLRRNNS

>sp|MVP_SOCMV|MOVEMENT protein|Soybean chlorotic mottle virus

Query: 1 NYRLLRRN 8
NY+ LRRN
Sbjct: 176 NYKFLRRN 183


>sp|PORTL_BPHA1|PROBABLE portal protein|Halomonas phage phiHAP-1 (isolate -/Gulf

Query: 2 YRLLRRN 8
YRLLR+N
Sbjct: 85 YRLLRQN 91


>sp|CAPSD_BPCHP|CAPSID protein VP1|Chlamydia phage 1 (Bacteriophage Chp1)

Query: 2 YRLLRRN 8
Y+L+RRN
Sbjct: 204 YKLMRRN 210


>sp|TEG5_GAHVM|TEGUMENT protein UL47 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 NYRLLRRN 8
NYRL+ RN
Sbjct: 268 NYRLVSRN 275




77|Sequence|381|390|RRNNSYTCYT

>sp|VINT_LAMBD|INTEGRASE phage lambda (Bacteriophage lambda)

Query: 2 RNNSYTCY 9
RNN Y CY
Sbjct: 19 RNNGYYCY 26


>sp|VINT_BP434|INTEGRASE phage 434 (Bacteriophage 434)

Query: 2 RNNSYTCY 9
RNN Y CY
Sbjct: 19 RNNGYYCY 26


>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)

Query: 1 RRNNSYTCYT 10
R NN YTC T
Sbjct: 479 RSNNGYTCIT 488


>sp|VINT_BPHK0|INTEGRASE phage HK022 (Bacteriophage HK022)

Query: 2 RNNSYTCY 9
RNN Y CY
Sbjct: 19 RNNGYYCY 26


>sp|COLL3_MIMIV|COLLAGEN-LIKE protein 3|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 RRNNSYTCYT 10
+RNN+ CY+
Sbjct: 13 QRNNTGICYS 22


>sp|L_PIRVV|RNA-DIRECTED RNA polymerase L|Pirital mammarenavirus (isolate

Query: 1 RRNNSYTCYT 10
+R NS CY+
Sbjct: 1431 KRTNSLVCYS 1440


>sp|L_AMPV1|RNA-DIRECTED RNA polymerase L|Avian metapneumovirus (isolate Canada

Query: 1 RRNNSYTCY 9
RRN+SY Y
Sbjct: 618 RRNDSYNNY 626


Query: 4 NSYTC 8
NSYTC
Sbjct: 88 NSYTC 92


>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain

Query: 1 RRNNSYTC 8
R NN YTC
Sbjct: 488 RSNNGYTC 495


>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)

Query: 1 RRNNSYTC 8
R NN YTC
Sbjct: 488 RSNNGYTC 495


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 RRNNSYTCY 9
RRN+SY Y
Sbjct: 618 RRNDSYNNY 626


>sp|V14_VACCW|ANKYRIN repeat protein 14|Vaccinia virus (strain Western Reserve)

Query: 1 RRNNSYTC 8
R NN YTC
Sbjct: 57 RSNNGYTC 64


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 2 RNNSYTCY 9
RN+ +TCY
Sbjct: 5205 RNSVFTCY 5212


>sp|RDRP_RRSVT|RNA-DIRECTED RNA polymerase|Rice ragged stunt virus (isolate

Query: 1 RRNNSYTCY 9
RR+ ++TC+
Sbjct: 879 RRDGTWTCF 887


>sp|R1AB_BC512|REPLICASE polyprotein 1ab|Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)

Query: 2 RNNSYTCY 9
RN+ +TCY
Sbjct: 5216 RNSVFTCY 5223


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 2 RNNSYT 7
RNNSYT
Sbjct: 308 RNNSYT 313


>sp|RDRP_TMVRA|REPLICASE large subunit|Tobacco mosaic virus (strain Rakkyo)

Query: 2 RNNSYTCY 9
R N +TCY
Sbjct: 219 RKNVHTCY 226


>sp|RDRP_TMVOM|REPLICASE large subunit|Tobacco mosaic virus (strain OM)

Query: 2 RNNSYTCY 9
R N +TCY
Sbjct: 219 RKNVHTCY 226


>sp|RDRP_TMVB|REPLICASE large subunit|Tobacco mosaic virus (strain B935A)

Query: 2 RNNSYTCY 9
R N +TCY
Sbjct: 219 RKNVHTCY 226


>sp|RDRP_TMV|REPLICASE large subunit|Tobacco mosaic virus (strain vulgare)

Query: 2 RNNSYTCY 9
R N +TCY
Sbjct: 219 RKNVHTCY 226


>sp|R1A_BCHK9|REPLICASE polyprotein 1a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 RRNNSYTCY 9
+R N+Y C+
Sbjct: 1381 KRGNTYLCF 1389


>sp|RDRP_TMVKR|REPLICASE large subunit|Tobacco mosaic virus (strain Korean

Query: 2 RNNSYTCY 9
R N +TCY
Sbjct: 219 RKNVHTCY 226


>sp|PCNA1_PBCV1|PROBABLE DNA polymerase sliding clamp|Paramecium bursaria Chlorella virus 1

Query: 3 NNSYTCYT 10
N+ YTC T
Sbjct: 177 NSDYTCVT 184


>sp|R1AB_BCHK9|REPLICASE polyprotein 1ab|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 RRNNSYTCY 9
+R N+Y C+
Sbjct: 1381 KRGNTYLCF 1389


>sp|VP6_AQRVC|CLAMP protein VP6|Aquareovirus C (isolate Golden shiner/USA/GSRV/1977)

Query: 3 NNSYTCY 9
NN YT Y
Sbjct: 356 NNDYTAY 362


>sp|CAPSD_PASV1|CAPSID polyprotein VP90|Porcine astrovirus 1 (PAstV-1)

Query: 1 RRNNSYTCY 9
++ +SY CY
Sbjct: 367 KQTSSYVCY 375




78|Sequence|386|395|YTCYTAAICG

>sp|RPO2_MIMIV|DNA-DIRECTED RNA polymerase subunit 2|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 YTCYTAAICG 10
YTC+ CG
Sbjct: 1128 YTCHVCDSCG 1137


>sp|RDRP_CGMVS|REPLICASE large subunit|Cucumber green mottle mosaic virus

Query: 3 CYTAAICG 10
C+ A+ CG
Sbjct: 1504 CFKASFCG 1511


>sp|POLG_DWV|GENOME polyprotein|Deformed wing virus (DWV)

Query: 3 CYTAAICG 10
C+T +CG
Sbjct: 1465 CFTICMCG 1472


>sp|A625_PBCV1|PUTATIVE transposase A625R|Paramecium bursaria Chlorella virus 1

Query: 1 YTCYTAAICG 10
YT T +CG
Sbjct: 370 YTSKTCGVCG 379


>sp|MOTB_BPT4|TRANSCRIPTION regulatory protein motB|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 YTAAICG 10
YT A+CG
Sbjct: 117 YTRAMCG 123


>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)

Query: 2 TCYTAAICG 10
TC+ AA CG
Sbjct: 523 TCHNAAQCG 531


>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)

Query: 2 TCYTAAICG 10
TC+ AA CG
Sbjct: 523 TCHNAAQCG 531


>sp|GH_ALHV1|ENVELOPE glycoprotein H|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 CYTAAIC 9
CYT ++C
Sbjct: 469 CYTTSMC 475




79|Sequence|391|400|AAICGLPVHA

>sp|Y425_AFV2P|UNCHARACTERIZED protein ORF425|Acidianus filamentous virus 2 (isolate

Query: 1 AAICGLPVHA 10
A + G+PVHA
Sbjct: 192 AKVGGMPVHA 201


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 3 ICGLPVHA 10
IC LP HA
Sbjct: 1570 ICVLPTHA 1577


>sp|HN_NDVJ|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Iba/85)

Query: 4 CGLPVH 9
CG PVH
Sbjct: 123 CGAPVH 128


>sp|HN_NDVM|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Miyadera/51)

Query: 4 CGLPVH 9
CG PVH
Sbjct: 123 CGAPVH 128


>sp|HN_NDVH3|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Her/33)

Query: 4 CGLPVH 9
CG PVH
Sbjct: 123 CGAPVH 128


>sp|HN_NDVI|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Italien/45)

Query: 4 CGLPVH 9
CG PVH
Sbjct: 123 CGAPVH 128


>sp|HN_NDVA|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Australia-Victoria/32)

Query: 4 CGLPVH 9
CG PVH
Sbjct: 123 CGAPVH 128


>sp|YO24_BPHC1|PUTATIVE tail tube protein|Haemophilus phage HP1 (strain HP1c1)

Query: 5 GLPVHA 10
GLP+HA
Sbjct: 15 GLPIHA 20


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 ICGLPVHA 10
+CGLPV A
Sbjct: 1005 LCGLPVSA 1012


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3 ICGLPVHA 10
+CGLPV A
Sbjct: 1002 LCGLPVSA 1009


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 3 ICGLPVH 9
IC LP+H
Sbjct: 568 ICPLPIH 574


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 ICGLPVHA 10
+CGLPV A
Sbjct: 1003 LCGLPVSA 1010


>sp|HN_NDVD|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain D26/76)

Query: 4 CGLPVH 9
CG P+H
Sbjct: 123 CGAPIH 128


>sp|HN_NDVQ|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Queensland/66)

Query: 4 CGLPVH 9
CG P+H
Sbjct: 123 CGAPIH 128


>sp|HN_NDVC|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chi/85)

Query: 4 CGLPVH 9
CG PVH
Sbjct: 123 CGEPVH 128


>sp|VG57_BPML5|GENE 57 protein|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 AAICGLP 7
A +CGLP
Sbjct: 71 AELCGLP 77


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3 ICGLPVHA 10
+CGLPV A
Sbjct: 1003 LCGLPVSA 1010


>sp|HN_NDVU|HEMAGGLUTININ-NEURAMINIDASE disease virus (strain Chicken/Northern

Query: 4 CGLPVH 9
CG P+H
Sbjct: 123 CGAPIH 128


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 1 AAICGLPVHA 10
A++CG P+ +
Sbjct: 662 ASVCGQPISS 671


>sp|V206_FOWPN|G-PROTEIN coupled receptor homolog FPV206|Fowlpox virus (strain NVSL) (FPV)

Query: 3 ICGLPVHA 10
IC LP HA
Sbjct: 236 ICFLPYHA 243


>sp|A565_VACCW|UNCHARACTERIZED protein A56.5|Vaccinia virus (strain Western Reserve)

Query: 3 ICGLPVH 9
ICG+P H
Sbjct: 31 ICGVPYH 37


>sp|CAP6_ADES1|PRE-PROTEIN VI|Snake adenovirus serotype 1 (SnAdV-1)

Query: 4 CGLPVHA 10
CGLPV+
Sbjct: 10 CGLPVYG 16




80|Sequence|396|405|LPVHATFRAA

>sp|NCAP_LDVC|NUCLEOPROTEIN dehydrogenase elevating virus (strain

Query: 1 LPVHATFR 8
LP HAT R
Sbjct: 98 LPTHATVR 105


>sp|NCAP_LDV|NUCLEOPROTEIN dehydrogenase-elevating virus (LDV)

Query: 1 LPVHATFR 8
LP HAT R
Sbjct: 98 LPTHATVR 105


>sp|TATR_NPVBM|TRANS-ACTIVATING transcriptional regulatory protein|Bombyx mori nuclear polyhedrosis

Query: 3 VHATFRAA 10
VH TF+AA
Sbjct: 312 VHHTFKAA 319


>sp|IE1_NPVAC|TRANS-ACTIVATING transcriptional regulatory protein|Autographa californica nuclear

Query: 3 VHATFRAA 10
VH TF+AA
Sbjct: 310 VHHTFKAA 317


>sp|TERL_BPP22|TERMINASE, large subunit|Salmonella phage P22 (Bacteriophage P22)

Query: 1 LPVHATF 7
LP HATF
Sbjct: 400 LPDHATF 406


>sp|TERL_BPLP7|TERMINASE, large subunit|Enterobacteria phage LP7 (Bacteriophage LP7)

Query: 1 LPVHATF 7
LP HATF
Sbjct: 396 LPDHATF 402


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 LPVHATFRAA 10
LPVHA F A
Sbjct: 958 LPVHALFAGA 967


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 1 LPVHATFRAA 10
LPVHA F A
Sbjct: 958 LPVHALFAGA 967


>sp|GH_GPCMV|ENVELOPE glycoprotein H|Guinea pig cytomegalovirus (strain 22122)

Query: 1 LPVHATFR 8
+PVHA+F+
Sbjct: 110 VPVHASFQ 117


>sp|POL2_SQMVM|RNA2 polyprotein|Squash mosaic virus (strain melon)

Query: 2 PVHATF 7
P+HATF
Sbjct: 376 PLHATF 381




81|Sequence|401|410|TFRAADSSAP

***** No hits found ******


82|Sequence|406|415|DSSAPEDSEK

>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 1 DSSAPEDS 8
DSS PED+
Sbjct: 119 DSSTPEDT 126


>sp|DPOL_DHBV1|PROTEIN P|Duck hepatitis B virus (strain

Query: 1 DSSAPEDS 8
DSSAP DS
Sbjct: 343 DSSAPVDS 350




83|Sequence|411|420|EDSEKLVGDT

>sp|YR665_MIMIV|UNCHARACTERIZED protein R665|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 EDSEKLVG 8
ED+EKL+G
Sbjct: 20 EDTEKLIG 27


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 EDSEKLVGDT 10
EDS LV DT
Sbjct: 966 EDSAVLVADT 975


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 1 EDSEKLVGDT 10
EDS LV DT
Sbjct: 966 EDSAVLVADT 975


>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate

Query: 3 SEKLVGDT 10
S+K VGDT
Sbjct: 876 SDKAVGDT 883




84|Sequence|416|425|LVGDTVSYSK

>sp|RBP_BPM1|RECEPTOR-RECOGNIZING protein gp38|Enterobacteria phage M1 (Bacteriophage M1)

Query: 1 LVGDTVSYSK 10
+ GD VSYSK
Sbjct: 79 ITGDLVSYSK 88


>sp|RBP_BPOX2|RECEPTOR-RECOGNIZING protein gp38|Enterobacteria phage Ox2 (Bacteriophage Ox2)

Query: 1 LVGDTVSYSK 10
+ GD VSYSK
Sbjct: 79 ITGDLVSYSK 88


>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 3 GDTVSYSK 10
GD+VSY K
Sbjct: 1095 GDSVSYQK 1102


>sp|RBP_BPAR1|RECEPTOR-RECOGNIZING protein gp38|Escherichia phage AR1 (Bacteriophage AR1)

Query: 1 LVGDTVSYSK 10
+ GD VSYS+
Sbjct: 77 ITGDLVSYSR 86


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 2 VGDTVSYSK 10
V DT+SY K
Sbjct: 1635 VADTISYPK 1643


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 3 GDTVSYSK 10
GD VSY K
Sbjct: 1095 GDAVSYQK 1102


>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)

Query: 1 LVGDTVSY 8
L GDT++Y
Sbjct: 3 LFGDTIAY 10


>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)

Query: 1 LVGDTVSY 8
L GDT++Y
Sbjct: 3 LFGDTIAY 10


>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)

Query: 1 LVGDTVSY 8
L GDT++Y
Sbjct: 3 LFGDTIAY 10


>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 LVGDTVSY 8
L GDT++Y
Sbjct: 3 LFGDTIAY 10


>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)

Query: 1 LVGDTVSY 8
L GDT++Y
Sbjct: 3 LFGDTIAY 10


>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 LVGDTVSY 8
L GDT++Y
Sbjct: 3 LFGDTIAY 10


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2 VGDTVSY 8
VGD VSY
Sbjct: 1623 VGDVVSY 1629


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2 VGDTVSY 8
VGD VSY
Sbjct: 1630 VGDVVSY 1636


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2 VGDTVSY 8
VGD VSY
Sbjct: 1630 VGDVVSY 1636


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 VGDTVSY 8
VGD VSY
Sbjct: 1626 VGDVVSY 1632




85|Sequence|421|430|VSYSKKRLRY

***** No hits found ******


86|Sequence|426|435|KRLRYDSYSS

>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 1 KRLRYDSY 8
KR+ YDSY
Sbjct: 1091 KRMGYDSY 1098


>sp|YR266_MIMIV|PUTATIVE J domain-containing protein R266|Acanthamoeba polyphaga mimivirus

Query: 1 KRLRYDSY 8
KRL YDSY
Sbjct: 62 KRLNYDSY 69




87|Sequence|431|440|DSYSSYCNAV

>sp|Y093_OSHVF|UNCHARACTERIZED protein ORF93|Ostreid herpesvirus 1 (isolate France)

Query: 3 YSSYCNAV 10
Y+SYCN V
Sbjct: 26 YNSYCNYV 33


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 3 YSSYCNA 9
YSS+CN
Sbjct: 551 YSSWCNG 557


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 3 YSSYCNA 9
YSS+CN
Sbjct: 551 YSSWCNG 557


>sp|VINT_BPHC1|INTEGRASE phage HP1 (strain HP1c1)

Query: 1 DSYSSYCNAV 10
D+Y S+ NAV
Sbjct: 257 DAYESFENAV 266


>sp|RDRP_OCSVU|RNA-DIRECTED RNA polymerase|Oat chlorotic stunt virus (isolate

Query: 2 SYSSYCNAV 10
+YSS+ NAV
Sbjct: 627 TYSSWLNAV 635


>sp|5054R_ASFWA|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 1 DSYSSYC 7
D Y SYC
Sbjct: 352 DQYYSYC 358


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 3 YSSYCNAV 10
Y +CNAV
Sbjct: 981 YEEFCNAV 988


>sp|5054R_ASFM2|PROTEIN MGF 505-4R|African swine fever virus (isolate

Query: 1 DSYSSYC 7
D Y SYC
Sbjct: 357 DDYYSYC 363


>sp|SHUT_ADES1|SHUTOFF protein|Snake adenovirus serotype 1 (SnAdV-1)

Query: 1 DSYSSYCN 8
D+YS +C+
Sbjct: 99 DTYSQFCS 106


>sp|PORTL_BPTWO|PROBABLE portal protein|Staphylococcus phage Twort (strain DSM

Query: 1 DSYSSYCNAV 10
DS+ S+C +
Sbjct: 161 DSFQSFCRKI 170


>sp|CVC2_ILTVT|CAPSID vertex component 2|Infectious laryngotracheitis virus (strain

Query: 3 YSSYCNAV 10
YSS CN +
Sbjct: 509 YSSLCNLI 516


>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)

Query: 1 DSYSSYC 7
D+Y++YC
Sbjct: 436 DNYTAYC 442


>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 DSYSSYC 7
D+Y++YC
Sbjct: 436 DNYTAYC 442




88|Sequence|436|445|YCNAVAEAEI

***** No hits found ******


89|Sequence|441|450|AEAEIEAEEG

***** No hits found ******


90|Sequence|446|455|EAEEGGVEMK

>sp|POL1_CPSMV|RNA1 polyprotein|Cowpea severe mosaic virus (strain

Query: 1 EAEEGGVEM 9
E++ GGVEM
Sbjct: 311 ESQSGGVEM 319


>sp|VLF1_NPVAC|VERY late expression factor 1|Autographa californica nuclear

Query: 3 EEGGVEMK 10
EE GVEM+
Sbjct: 288 EESGVEME 295




91|Sequence|451|460|GVEMKLASEL

>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 GVEMKLASE 9
G E+KLA+E
Sbjct: 707 GTELKLATE 715




92|Sequence|456|465|LASELADPDQ

>sp|VEF_GVTN|VIRAL-ENHANCING factor|Trichoplusia ni granulosis virus (TnGV)

Query: 1 LASELADP 8
LAS+L DP
Sbjct: 715 LASQLVDP 722


>sp|VP7_ROT18|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 2 ASELADPD 9
+++LADPD
Sbjct: 90 SNDLADPD 97


>sp|VEF_GVPU|VIRAL-ENHANCING factor|Pseudalatia unipuncta granulosis virus (PuGV)

Query: 1 LASELADP 8
LAS+L DP
Sbjct: 715 LASQLVDP 722




93|Sequence|461|470|ADPDQPREDP

>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 ADPDQPRED 9
A PDQP +D
Sbjct: 2367 ASPDQPSDD 2375


>sp|L_MMVR|RNA-DIRECTED RNA polymerase L|Maize mosaic virus (isolate Maize/United

Query: 2 DPDQPREDP 10
DPD P DP
Sbjct: 2 DPDYPDLDP 10


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 PDQPRE 8
PD+PRE
Sbjct: 730 PDRPRE 735


>sp|PG047_VACCW|IMMUNE evasion protein OPG047|Vaccinia virus (strain Western Reserve)

Query: 2 DPDQPREDP 10
DP PR++P
Sbjct: 432 DPIYPRDNP 440


>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 DPDQPREDP 10
DP PR++P
Sbjct: 432 DPIYPRDNP 440


>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)

Query: 2 DPDQPREDP 10
DP PR++P
Sbjct: 428 DPIYPRDNP 436


>sp|PG047_MONPV|IMMUNE evasion protein OPG047|Monkeypox virus (MPXV)

Query: 2 DPDQPREDP 10
DP PR++P
Sbjct: 432 DPIYPRDNP 440


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1 ADPDQPRED 9
A PDQP +D
Sbjct: 2367 APPDQPSDD 2375


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 3 PDQPREDP 10
P QP+EDP
Sbjct: 435 PAQPKEDP 442


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 4 DQPREDP 10
DQP EDP
Sbjct: 518 DQPVEDP 524


>sp|CAPS1_MIMIV|CAPSID protein 1|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 DPDQPREDP 10
DP P E+P
Sbjct: 359 DPSNPSEEP 367


>sp|POL1_SDVS5|RNA1 polyprotein|Satsuma dwarf virus (isolate Satsuma

Query: 3 PDQPRED 9
PD PRE+
Sbjct: 1141 PDDPREE 1147


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 DPDQPREDP 10
DPD P E P
Sbjct: 10 DPDNPDEGP 18


>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2 DPDQPREDP 10
DPD P E P
Sbjct: 10 DPDNPDEGP 18


>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)

Query: 1 ADPDQPRED 9
ADP+ PR+D
Sbjct: 30 ADPESPRDD 38


>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 DPDQPREDP 10
DPD P E P
Sbjct: 10 DPDNPDEGP 18


>sp|POLN_GFKVM|NON-STRUCTURAL replication polyprotein|Grapevine fleck virus (isolate Italy/MT48)

Query: 1 ADPDQPREDP 10
ADP +PR P
Sbjct: 1305 ADPSKPRPTP 1314


>sp|OE56_NPVOP|OCCLUSION-DERIVED virus envelope protein E56|Orgyia pseudotsugata multicapsid

Query: 1 ADPDQPR 7
ADPD P+
Sbjct: 259 ADPDSPQ 265




94|Sequence|466|475|PREDPAEEEK

>sp|1106L_ASFWA|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 1 PREDPAEEE 9
P EDP EEE
Sbjct: 26 PTEDPPEEE 34


>sp|1106L_ASFP4|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 1 PREDPAEEE 9
P EDP EEE
Sbjct: 26 PTEDPPEEE 34


>sp|1106L_ASFL5|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 1 PREDPAEEE 9
P EDP EEE
Sbjct: 26 PTEDPPEEE 34


>sp|1106L_ASFB7|PROTEIN MGF 110-6L|African swine fever virus (strain

Query: 1 PREDPAEEE 9
P EDP EEE
Sbjct: 26 PTEDPPEEE 34


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 1 PREDPAEEEK 10
P+E P +EEK
Sbjct: 738 PKETPTDEEK 747


>sp|1106L_ASFM2|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 1 PREDPAEEE 9
P EDP EEE
Sbjct: 26 PTEDPPEEE 34


>sp|1106L_ASFK5|PROTEIN MGF 110-6L|African swine fever virus (isolate

Query: 1 PREDPAEEE 9
P EDP EEE
Sbjct: 30 PTEDPPEEE 38


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1 PREDPAEEEK 10
P E+PA EE+
Sbjct: 20 PVENPAAEEE 29


>sp|GAG_FSVST|GAG polyprotein|Feline sarcoma virus (strain Snyder-Theilen)

Query: 2 REDPAEEEK 10
RE+PAEE +
Sbjct: 187 RENPAEESQ 195


>sp|POL_FLV|GAG-POL polyprotein|Feline leukemia virus

Query: 2 REDPAEEEK 10
RE+PAEE +
Sbjct: 187 RENPAEESQ 195


>sp|GGAG_FSVMD|GLYCO-GAG protein|Feline sarcoma virus (strain McDonough)

Query: 2 REDPAEEEK 10
RE+PAEE +
Sbjct: 264 RENPAEESQ 272


>sp|GAG_FSVHZ|GAG polyprotein|Feline sarcoma virus (strain Hardy-Zuckerman

Query: 2 REDPAEEEK 10
RE+PAEE +
Sbjct: 187 RENPAEESQ 195


>sp|GAG_FSVGA|GAG polyprotein|Feline sarcoma virus (strain Gardner-Arnstein)

Query: 2 REDPAEEEK 10
RE+PAEE +
Sbjct: 187 RENPAEESQ 195




95|Sequence|471|480|AEEEKEEKDA

***** No hits found ******


96|Sequence|476|485|EEKDAPEVHL

>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2156 ERDAPEAFL 2164


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2156 ERDAPEAFL 2164


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2154 ERDAPEAFL 2162


>sp|EA59_LAMBD|PROTEIN ea59|Escherichia phage lambda (Bacteriophage lambda)

Query: 4 DAPEVHL 10
D PEVHL
Sbjct: 391 DEPEVHL 397


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 2 EKDAPEVHL 10
E+DAPE L
Sbjct: 2155 ERDAPEAML 2163


>sp|L_CPXVB|RNA-DIRECTED RNA polymerase L|Cupixi mammarenavirus (isolate Rat/Brasil/BeAn

Query: 4 DAPEVHL 10
D PE+HL
Sbjct: 1909 DEPEIHL 1915




97|Sequence|481|490|PEVHLLFHFL

>sp|NS7A_BCHK9|NON-STRUCTURAL protein 7a|Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9)

Query: 1 PEVHLLFHF 9
PE H +FH
Sbjct: 125 PEPHTVFHL 133


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4 HLLFHFL 10
H+LF+FL
Sbjct: 2728 HMLFNFL 2734


>sp|VC06_SWPVK|UNCHARACTERIZED protein C6|Swinepox virus (strain Kasza) (SWPV)

Query: 2 EVHLLFHFL 10
+VH LF+F+
Sbjct: 169 DVHCLFYFI 177


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 4 HLLFHFL 10
H+LF+FL
Sbjct: 2728 HMLFNFL 2734


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1 PEVHLLFH 8
P HL+FH
Sbjct: 92 PMSHLIFH 99


>sp|YR217_MIMIV|UNCHARACTERIZED protein R217|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 PEVHLLFHF 9
PE+H+ ++F
Sbjct: 509 PEIHVNYYF 517


>sp|VG11_ALHV1|UNCHARACTERIZED gene 11 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 2 EVHLLFHF 9
++HL FHF
Sbjct: 226 KIHLDFHF 233




98|Sequence|486|495|LFHFLQVLTA

>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 2 FHFLQVL 8
FHFL+V+
Sbjct: 78 FHFLKVI 84


>sp|RDRP_MPRVN|RNA-DIRECTED RNA polymerase VP2|Micromonas pusilla reovirus (isolate

Query: 3 HFLQVLT 9
HFLQV T
Sbjct: 881 HFLQVYT 887




99|Sequence|491|500|QVLTACFGSF

>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)

Query: 4 TACFGSF 10
T CFGSF
Sbjct: 7 TICFGSF 13


>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)

Query: 4 TACFGSF 10
T CFGSF
Sbjct: 7 TICFGSF 13


>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)

Query: 4 TACFGSF 10
T CFGSF
Sbjct: 7 TICFGSF 13


>sp|DPOL_BPML5|DNA polymerase|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 1 QVLTACFG 8
QVL CFG
Sbjct: 102 QVLDQCFG 109


>sp|YL531_MIMIV|UNCHARACTERIZED protein L531|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 ACFGSF 10
AC+GSF
Sbjct: 204 ACYGSF 209


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 2 VLTACFGSF 10
V + CFG F
Sbjct: 13 VFSMCFGKF 21


>sp|DPOL_BPMD2|DNA polymerase|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 QVLTACFG 8
QVL CFG
Sbjct: 103 QVLDRCFG 110


>sp|ENLYS_BPPS3|SAR-ENDOLYSIN PS34

Query: 2 VLTACFG 8
VLT C+G
Sbjct: 50 VLTVCYG 56


>sp|ENLYS_BPPS1|SAR-ENDOLYSIN PS119

Query: 2 VLTACFG 8
VLT C+G
Sbjct: 50 VLTVCYG 56




100|Sequence|496|505|CFGSFAHGGN

>sp|CAPSD_HASV|CAPSID protein|Helicoverpa armigera stunt virus (HaSV)

Query: 2 FGSFAHGG 9
FG FAH G
Sbjct: 541 FGQFAHAG 548


>sp|ORF4B_BCHK4|NON-STRUCTURAL protein ORF4b|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 CFGSFAH 7
CFG+F H
Sbjct: 142 CFGNFLH 148


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1 CFGSFAHGGN 10
C+GSFA N
Sbjct: 219 CYGSFARPTN 228


>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8

Query: 1 CFGSFAHGGN 10
C+GSFA N
Sbjct: 150 CYGSFARPTN 159


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1 CFGSFAHGGN 10
C+GSFA N
Sbjct: 221 CYGSFARPTN 230


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1 CFGSFAHGGN 10
C+GSFA N
Sbjct: 224 CYGSFARPTN 233


>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 CFGSFAHGGN 10
CF ++ GGN
Sbjct: 1128 CFRAYGDGGN 1137


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 1 CFGSFAHGGN 10
C+GSFA N
Sbjct: 218 CYGSFAKPTN 227


>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4

Query: 1 CFGSFAHGGN 10
C+GSFA N
Sbjct: 117 CYGSFAKPTN 126


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1 CFGSFA-----HGG 9
C+GS+A HGG
Sbjct: 213 CYGSYARPTNEHGG 226


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 1 CFGSFAHGGN 10
C+GS+A N
Sbjct: 115 CYGSYARATN 124


>sp|US08_HCMVM|MEMBRANE glycoprotein US8|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 CFGSFAHGGN 10
C+ + AH GN
Sbjct: 14 CWVTLAHAGN 23


>sp|US08_HCMVA|UNIQUE short US8 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 1 CFGSFAHGGN 10
C+ + AH GN
Sbjct: 14 CWVTLAHAGN 23


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 2 FGSFAHGG 9
FG+ HGG
Sbjct: 227 FGTVTHGG 234


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 3 GSFAHGGN 10
GSF GGN
Sbjct: 712 GSFRRGGN 719


>sp|YR500_MIMIV|UNCHARACTERIZED protein R500|Acanthamoeba polyphaga mimivirus (APMV)

Query: 5 FAHGGN 10
F+HGGN
Sbjct: 114 FSHGGN 119


>sp|GH_PSHV1|ENVELOPE glycoprotein H|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 FGSFAHGGN 10
+GSF +GG+
Sbjct: 562 YGSFLYGGS 570


>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1

Query: 1 CFGSFAH 7
CF FAH
Sbjct: 228 CFQEFAH 234


>sp|ORF10_BPKPP|STRUCTURAL protein ORF10|Pseudomonas phage KPP10 (Bacteriophage KPP10)

Query: 4 SFAHGGN 10
+F HGGN
Sbjct: 144 TFQHGGN 150


>sp|POL1_BRAV|RNA1 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 4 SFAHGGN 10
+FA+GGN
Sbjct: 1297 TFAYGGN 1303


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1 CFGSFAHGGN 10
C+GS+A N
Sbjct: 209 CYGSYARPTN 218


>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6

Query: 1 CFGSFAHGGN 10
C+GS+A N
Sbjct: 123 CYGSYARPTN 132


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 CFGSFAHGGN 10
C+GS+A N
Sbjct: 244 CYGSYARPTN 253


>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1

Query: 1 CFGSFAHGGN 10
C+GS+A N
Sbjct: 126 CYGSYARPTN 135


>sp|YR804_MIMIV|UNCHARACTERIZED protein R804|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 GSFAHGG 9
G F HGG
Sbjct: 91 GKFIHGG 97


>sp|VMT9_MYXVL|KELCH repeat protein M-T9|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 CFGSFAHGG 9
C G HGG
Sbjct: 419 CIGGRIHGG 427


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_TIBVC|RNA-DIRECTED RNA polymerase L|Tibrogargan virus (strain CS132) (TIBV)

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 366 YGSFRHWGH 374


>sp|L_SVCV|RNA-DIRECTED RNA polymerase L|Spring viremia of carp virus

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 341 YGSFRHWGH 349


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 341 YGSFRHWGH 349


>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 352 YGSFRHWGH 360


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 2 FGSFAHGGN 10
+GSF H G+
Sbjct: 342 YGSFRHWGH 350


>sp|VE7_HPV25|PROTEIN E7|Human papillomavirus 25

Query: 1 CFGSFAHGGN 10
C G+ HGG+
Sbjct: 93 CRGNCKHGGS 102


>sp|VE7_HPV21|PROTEIN E7|Human papillomavirus 21

Query: 1 CFGSFAHGGN 10
C G+ HGG+
Sbjct: 92 CRGNCKHGGS 101


>sp|VE7_HPV20|PROTEIN E7|Human papillomavirus 20

Query: 1 CFGSFAHGGN 10
C G+ HGG+
Sbjct: 93 CRGNCKHGGS 102


>sp|VE7_HPV08|PROTEIN E7|Human papillomavirus type 8

Query: 1 CFGSFAHGGN 10
C G+ HGG+
Sbjct: 94 CRGNCKHGGS 103




101|Sequence|501|510|AHGGNDVSNA

>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)

Query: 1 AHGGNDVSN 9
AHGG D N
Sbjct: 198 AHGGEDARN 206


>sp|YR500_MIMIV|UNCHARACTERIZED protein R500|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 AHGGNDVS 8
+HGGN V+
Sbjct: 115 SHGGNSVN 122


>sp|RFCL_MIMIV|PUTATIVE replication factor C large|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 HGGNDVS 8
HG NDV+
Sbjct: 296 HGNNDVT 302




102|Sequence|506|515|DVSNAIGPLV

>sp|VF151_ASFB7|PROTEIN A151R|African swine fever virus (strain

Query: 1 DVSNAIGPLV 10
DVS ++GP +
Sbjct: 115 DVSTSVGPCI 124


>sp|TEG6_EHV1K|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Kentucky

Query: 1 DVSNAIGPL 9
D+SN + PL
Sbjct: 40 DISNVVSPL 48


>sp|TEG6_EHV1B|TEGUMENT protein UL55 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 1 DVSNAIGPL 9
D+SN + PL
Sbjct: 40 DISNVVSPL 48


>sp|036L_FRG3G|UNCHARACTERIZED protein 036L|Frog virus 3 (isolate Goorha)

Query: 1 DVSNAIGPL 9
DVS ++GPL
Sbjct: 5 DVSGSLGPL 13


>sp|POLG_BECN1|GENOME polyprotein|Bovine enteric calicivirus Newbury agent-1

Query: 2 VSNAIGPLV 10
VS A+GP+V
Sbjct: 273 VSTALGPMV 281


>sp|POLG_BECNB|GENOME polyprotein|Bovine enteric calicivirus NB (isolate

Query: 2 VSNAIGPLV 10
VS A+GP+V
Sbjct: 273 VSTALGPMV 281


>sp|CHLE_MIMIV|PROBABLE cholinesterase|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 DVSNAIGP 8
+++NA+GP
Sbjct: 283 NITNAVGP 290


>sp|DPOL_GPCMV|DNA polymerase|Guinea pig cytomegalovirus (strain 22122)

Query: 2 VSNAIGPLV 10
V+N +GP++
Sbjct: 1047 VTNVLGPII 1055




103|Sequence|511|520|IGPLVALWLI

>sp|L_SV41|RNA-DIRECTED RNA polymerase L|Simian virus 41 (SV41)

Query: 3 PLVALWL 9
PLV+LWL
Sbjct: 177 PLVSLWL 183


>sp|P40_TRVPP|40 kDa protein|Tobacco rattle virus (isolate PpK20)

Query: 1 IGPLVALWLI 10
IGP+V WL+
Sbjct: 345 IGPIVYGWLL 354


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2 GPLVALWL 9
GP ALWL
Sbjct: 3495 GPFDALWL 3502


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2 GPLVALWL 9
GP ALWL
Sbjct: 3495 GPFDALWL 3502


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2 GPLVALWL 9
GP+V +W+
Sbjct: 3117 GPIVPIWM 3124


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2 GPLVALWL 9
GP+V +W+
Sbjct: 3117 GPIVPIWM 3124


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 3 PLVALWL 9
PLV LWL
Sbjct: 398 PLVKLWL 404


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 2 GPLVALWL 9
GPL LWL
Sbjct: 667 GPLQNLWL 674


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 2 GPLVALWL 9
GPL LWL
Sbjct: 667 GPLQNLWL 674


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 3 PLVALW 8
PLV+LW
Sbjct: 449 PLVSLW 454


>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GPLVALW 8
GPL+A W
Sbjct: 288 GPLLAFW 294


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 3 PLVALWLI 10
PL A WLI
Sbjct: 19 PLAAPWLI 26


>sp|TRM1_PSHV1|TRIPARTITE terminase subunit 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 PLVALW 8
PL+A+W
Sbjct: 821 PLIAIW 826


>sp|RPOA_PRRSB|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 PLVALWLI 10
PL LWL+
Sbjct: 1716 PLTILWLV 1723


>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 GPLVALW 8
GPL+A W
Sbjct: 320 GPLLAFW 326


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GPLVALW 8
GPL LW
Sbjct: 2443 GPLTTLW 2449


>sp|RPOA_PRRSV|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 PLVALWLI 10
PL LWL+
Sbjct: 1686 PLTILWLV 1693


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GPLVALW 8
GPL LW
Sbjct: 2444 GPLTTLW 2450


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 GPLVALW 8
GPL LW
Sbjct: 2444 GPLTTLW 2450


>sp|GC_BHV1C|ENVELOPE glycoprotein C homolog|Bovine herpesvirus 1.1 (strain Cooper)

Query: 1 IGPLVALWLI 10
+GPL WLI
Sbjct: 1 MGPLGRAWLI 10


>sp|RPOA_PRRSR|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 PLVALWLI 10
PL LWL+
Sbjct: 1716 PLTILWLV 1723


>sp|RPOA_PRRS1|REPLICASE polyprotein 1ab|Porcine reproductive and respiratory syndrome

Query: 3 PLVALWLI 10
PL LWL+
Sbjct: 1716 PLTILWLV 1723


>sp|NS1_PAVPN|INITIATOR protein NS1|Porcine parvovirus (strain NADL-2) (PPV)

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 531 PLICAWLV 538


>sp|NS1_PAVPK|INITIATOR protein NS1|Porcine parvovirus (strain Kresse) (PPV)

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 531 PLICAWLV 538


>sp|NS1_PAVCN|INITIATOR protein NS1|Canine parvovirus type 2 (isolate

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 533 PLICAWLV 540


>sp|NS1_MEVA|INITIATOR protein NS1|Mink enteritis virus (strain Abashiri)

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 533 PLICAWLV 540


>sp|NS1_FPV19|INITIATOR protein NS1|Feline panleukopenia virus (strain 193)

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 533 PLICAWLV 540


>sp|VP1_AQRVA|OUTER capsid protein VP1|Aquareovirus A (isolate Chum

Query: 1 IGPLVALW 8
IGPL +W
Sbjct: 1081 IGPLAVVW 1088


>sp|POL_SIVV1|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 IGPLVALW 8
+ PLV LW
Sbjct: 1032 VPPLVTLW 1039


>sp|NS1_FPV|INITIATOR protein NS1|Feline panleukopenia virus (FPV)

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 257 PLICAWLV 264


>sp|NS1_PAVHH|INITIATOR protein NS1|Hamster parvovirus H1

Query: 3 PLVALWLI 10
PL+ WL+
Sbjct: 532 PLICAWLV 539


>sp|POL_SIVV2|POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 IGPLVALW 8
+ PLV LW
Sbjct: 17 VPPLVTLW 24




104|Sequence|516|525|ALWLIYKQGG

>sp|138R_IIV6|UNCHARACTERIZED protein 138R|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 LWLIYKQG 9
LWLI+K G
Sbjct: 22 LWLIFKNG 29


>sp|ORF29_BPKHP|COILED-COIL domain-containing protein ORF29|Helicobacter pylori bacteriophage

Query: 2 LWLIYKQGG 10
LWL YK GG
Sbjct: 143 LWLNYKTGG 151


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1A_CVBQ|REPLICASE polyprotein 1a|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1A_CVBM|REPLICASE polyprotein 1a|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1A_CVBLU|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1A_CVBEN|REPLICASE polyprotein 1a|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1AB_CVBQ|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Quebec) (BCoV)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1AB_CVBM|REPLICASE polyprotein 1ab|Bovine coronavirus (strain Mebus) (BCoV)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1AB_CVBLU|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1AB_CVBEN|REPLICASE polyprotein 1ab|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)

Query: 2 LWLIYKQ 8
LW++YKQ
Sbjct: 1098 LWVLYKQ 1104


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 LWLIYKQG 9
LWL YK G
Sbjct: 1144 LWLSYKAG 1151


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 LWLIYKQG 9
LWL YK G
Sbjct: 1145 LWLSYKAG 1152


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 2 LWLIYKQG 9
LWL YK G
Sbjct: 1144 LWLSYKAG 1151


>sp|R1AB_CVMJD|REPLICASE polyprotein 1ab|Murine coronavirus (strain defective JHM)

Query: 2 LWLIYKQG 9
LWL YK G
Sbjct: 413 LWLSYKAG 420


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 2 LWLIYKQG 9
LWL YK G
Sbjct: 1145 LWLSYKAG 1152


>sp|NCAP_MILVL|NUCLEOPROTEIN lettuce virus (isolate Lettuce/Netherlands/LS301-O)

Query: 1 ALWLIYKQGG 10
A L+Y QGG
Sbjct: 209 AFCLVYNQGG 218


>sp|MVP2_BYVU|MOVEMENT protein p6|Beet yellows virus (isolate Ukraine)

Query: 2 LWLIYKQ 8
+W +YKQ
Sbjct: 28 IWFVYKQ 34


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LWLIYKQGG 10
+WLI +GG
Sbjct: 231 VWLILTEGG 239


>sp|CAPSD_TTVZ1|CAPSID protein|Torque teno douroucouli virus (isolate

Query: 2 LWLIYKQ 8
LWLIY Q
Sbjct: 353 LWLIYSQ 359


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 LWLIYKQGG 10
+WLI +GG
Sbjct: 300 VWLILTEGG 308


>sp|ORF4A_MERS1|NON-STRUCTURAL protein ORF4a|Middle East respiratory syndrome-related

Query: 3 WLIYKQGG 10
WL++K GG
Sbjct: 76 WLLHKDGG 83


>sp|MCAPS_BYDVP|READTHROUGH protein P3-RTD|Barley yellow dwarf virus (isolate

Query: 2 LWLIYKQGG 10
W++YK G
Sbjct: 171 FWMLYKANG 179


>sp|CAPSD_BYDVR|MAJOR capsid protein|Barley yellow dwarf virus (isolate

Query: 2 LWLIYKQGG 10
W++YK G
Sbjct: 171 FWMLYKANG 179


>sp|CAPSD_BYDVP|MAJOR capsid protein|Barley yellow dwarf virus (isolate

Query: 2 LWLIYKQGG 10
W++YK G
Sbjct: 171 FWMLYKANG 179


>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7

Query: 3 WLIYKQGG 10
W IY GG
Sbjct: 43 WRIYDNGG 50


>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3

Query: 3 WLIYKQGG 10
W IY GG
Sbjct: 43 WRIYDNGG 50


>sp|TGB3_BSMV|MOVEMENT protein TGB3|Barley stripe mosaic virus (BSMV)

Query: 1 ALWLIY 6
ALWL+Y
Sbjct: 69 ALWLLY 74


>sp|RDRP_FXMV|RNA replication protein|Foxtail mosaic virus

Query: 2 LWLIYKQG 9
LWL YK+
Sbjct: 966 LWLAYKRA 973




105|Sequence|521|530|YKQGGVTQEA

>sp|R1A_IBVM|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 KQGGVTQE 9
K GGVTQ+
Sbjct: 3494 KNGGVTQQ 3501


>sp|R1A_IBVBC|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 KQGGVTQE 9
K GGVTQ+
Sbjct: 3492 KNGGVTQQ 3499


>sp|R1A_IBVB|REPLICASE polyprotein 1a|Avian infectious bronchitis virus (strain

Query: 2 KQGGVTQE 9
K GGVTQ+
Sbjct: 3492 KNGGVTQQ 3499


>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 KQGGVTQE 9
K GGVTQ+
Sbjct: 3494 KNGGVTQQ 3501


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 KQGGVTQE 9
K GGVTQ+
Sbjct: 3492 KNGGVTQQ 3499


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 2 KQGGVTQE 9
K GGVTQ+
Sbjct: 3492 KNGGVTQQ 3499


>sp|DEPOL_BPK51|DEPOLYMERASE, capsule KL64-specific|Klebsiella phage P510 (Bacteriophage P510)

Query: 2 KQGGVTQEA 10
KQGG Q+A
Sbjct: 262 KQGGTVQDA 270


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 1 YKQGGVTQE 9
Y+QG +TQ+
Sbjct: 856 YRQGCITQK 864




106|Sequence|526|535|VTQEAATPVW

>sp|POL_MMTVB|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 3 QEAATPVW 10
Q+A TP+W
Sbjct: 1684 QDAETPIW 1691


>sp|POL_MMTVC|GAG-PRO-POL polyprotein|Mouse mammary tumor virus (strain

Query: 3 QEAATPVW 10
Q+A TP+W
Sbjct: 1684 QDAETPIW 1691




107|Sequence|531|540|ATPVWLLFYG

>sp|UL95_SHV21|GENE 34 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 4 VWLLFYG 10
+WLLFYG
Sbjct: 150 IWLLFYG 156


>sp|UL95_EHV2|GENE 34 protein|Equine herpesvirus 2 (strain 86/87)

Query: 4 VWLLFYG 10
+WLLFYG
Sbjct: 177 MWLLFYG 183


>sp|UL95_ALHV1|GENE 34 protein|Alcelaphine herpesvirus 1 (strain C500)

Query: 4 VWLLFYG 10
+WLLFYG
Sbjct: 166 MWLLFYG 172


>sp|SUNS_BPSPB|GLYCOSYLTRANSFERASE SunS|Bacillus phage SPbeta (Bacillus phage

Query: 3 PVWLLFYG 10
P WL F+G
Sbjct: 251 PKWLFFFG 258


>sp|VG01_ICHVA|UNCHARACTERIZED protein ORF1|Ictalurid herpesvirus 1 (strain Auburn)

Query: 3 PVWLLF 8
P+WLLF
Sbjct: 480 PIWLLF 485


>sp|POL1_RRVC|RNA1 polyprotein|Raspberry ringspot virus (strain cherry)

Query: 3 PVWLLFYG 10
P WL YG
Sbjct: 797 PFWLYIYG 804


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 3 PVWLLFYG 10
P+W FYG
Sbjct: 468 PLWAAFYG 475


>sp|BHLA_BPSPB|PROTEIN bhlA|Bacillus phage SPbeta (Bacillus phage

Query: 5 WLLFY 9
WLLFY
Sbjct: 21 WLLFY 25


>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P

Query: 4 VWLLFYG 10
VWLLF G
Sbjct: 172 VWLLFLG 178


>sp|END5_BPT4|ENDONUCLEASE V|Enterobacteria phage T4 (Bacteriophage T4)

Query: 3 PVWLLFYG 10
P W +YG
Sbjct: 126 PTWYKYYG 133


>sp|1A_TOBSV|REPLICATION protein 1a|Tobacco streak virus (strain WC)

Query: 1 ATPVWLLFYG 10
AT VW +F G
Sbjct: 552 ATHVWSVFVG 561


>sp|YL829_MIMIV|UNCHARACTERIZED protein L829|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 PVWLLFY 9
P WL FY
Sbjct: 95 PKWLKFY 101


>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)

Query: 4 VWLLFYG 10
+W LFYG
Sbjct: 164 MWALFYG 170


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2 TPVWL 6
TPVWL
Sbjct: 56 TPVWL 60


>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1

Query: 3 PVWLLFYG 10
P+WL F+G
Sbjct: 396 PLWLGFWG 403


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2 TPVWL 6
TPVWL
Sbjct: 56 TPVWL 60


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5 WLLFY 9
WLLFY
Sbjct: 7 WLLFY 11


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2 TPVWL 6
TPVWL
Sbjct: 56 TPVWL 60


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2 TPVWL 6
TPVWL
Sbjct: 56 TPVWL 60


>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)

Query: 1 ATPVWLLF 8
ATP W+L+
Sbjct: 324 ATPDWILY 331


>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)

Query: 1 ATPVWLLF 8
ATP W+L+
Sbjct: 324 ATPDWILY 331


>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)

Query: 1 ATPVWLLF 8
ATP W+L+
Sbjct: 324 ATPDWILY 331


>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)

Query: 3 PVWLLFYG 10
P+W F+G
Sbjct: 454 PLWAAFFG 461


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2 TPVWL 6
TPVWL
Sbjct: 56 TPVWL 60




108|Sequence|536|545|LLFYGGVGIC

>sp|REP_BPHC1|REPLICATION protein|Haemophilus phage HP1 (strain HP1c1)

Query: 3 FYGGVGIC 10
FYGG IC
Sbjct: 560 FYGGASIC 567


>sp|L_IPPYV|RNA-DIRECTED RNA polymerase L|Ippy mammarenavirus (isolate Rat/Central African

Query: 4 YGGVGIC 10
Y G+GIC
Sbjct: 274 YKGIGIC 280


>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 51 VFFGGLGI 58


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 2 LFYGGVGI 9
+F+GG+GI
Sbjct: 50 VFFGGLGI 57


>sp|UL95_SHV21|GENE 34 protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 LLFYGGVGIC 10
LLFYG C
Sbjct: 152 LLFYGKKSFC 161


>sp|RDRP_BBSCV|RNA replication polyprotein|Blueberry scorch virus (BBScV)

Query: 2 LFYGGVGIC 10
LF+G +G C
Sbjct: 385 LFFGNLGRC 393


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 1 LLFYGGVGIC 10
L+F G V +C
Sbjct: 370 LMFMGAVAVC 379


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 5 GGVGIC 10
GG+G+C
Sbjct: 616 GGIGLC 621


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 5 GGVGIC 10
GG+G+C
Sbjct: 618 GGIGLC 623


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 5 GGVGIC 10
GG+G+C
Sbjct: 611 GGIGLC 616


>sp|UL95_EHV2|GENE 34 protein|Equine herpesvirus 2 (strain 86/87)

Query: 1 LLFYGGVGIC 10
LLFYG C
Sbjct: 179 LLFYGRRSFC 188


>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|PG145_VACCW|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Western Reserve)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_RABPU|TRANSCRIPT termination protein A18|Rabbitpox virus (strain Utrecht) (RPV)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_ECTVM|TRANSCRIPT termination protein A18|Ectromelia virus (strain Moscow) (ECTV)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_CAMPS|TRANSCRIPT termination protein A18|Camelpox virus (strain CMS)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|A18_CAMPM|TRANSCRIPT termination protein A18|Camelpox virus (strain M-96)

Query: 2 LFYGGVGI 9
LFY G G+
Sbjct: 380 LFYSGTGL 387


>sp|R1AB_BCHK5|REPLICASE polyprotein 1ab|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4396 YGGASVC 4402


>sp|R1A_BCHK5|REPLICASE polyprotein 1a|Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004)

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4396 YGGASVC 4402


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4305 YGGASVC 4311


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4305 YGGASVC 4311


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4356 YGGASVC 4362


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4349 YGGASVC 4355


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4356 YGGASVC 4362


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 4349 YGGASVC 4355


>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 3852 YGGASVC 3858


>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain

Query: 4 YGGVGIC 10
YGG +C
Sbjct: 3852 YGGASVC 3858


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 4 YGGVGIC 10
YGG IC
Sbjct: 3976 YGGASIC 3982




109|Sequence|541|550|GVGICTGLWV

>sp|BRLF1_SHV21|PUTATIVE transcription activator BRLF1 homolog|Saimiriine herpesvirus 2

Query: 5 CTGLW 9
CTGLW
Sbjct: 171 CTGLW 175


>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 ICTGLWV 10
+C GLWV
Sbjct: 456 LCLGLWV 462


>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 ICTGLWV 10
+C GLWV
Sbjct: 456 LCLGLWV 462


>sp|POLN_CRPVC|REPLICASE polyprotein|Cricket paralysis virus (isolate

Query: 4 ICTGLW 9
IC GLW
Sbjct: 1543 ICIGLW 1548


>sp|RPB2_FRG3G|PUTATIVE DNA-directed RNA polymerase II|Frog virus 3 (isolate Goorha)

Query: 3 GICTGLWV 10
G+C LW+
Sbjct: 916 GLCDALWI 923


>sp|POLN_DCVEB|REPLICASE polyprotein|Drosophila C virus (strain EB)

Query: 4 ICTGLW 9
IC GLW
Sbjct: 1531 ICLGLW 1536


>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 ICTGLW 9
+C GLW
Sbjct: 532 VCAGLW 537


>sp|UL32_GAHVM|PACKAGING protein UL32 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 4 ICTGLW 9
+C GLW
Sbjct: 588 VCAGLW 593


>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 4 ICTGLW 9
+C GLW
Sbjct: 567 VCAGLW 572


>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)

Query: 4 ICTGLW 9
+C GLW
Sbjct: 567 VCAGLW 572


>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3 GICTGLW 9
G C GLW
Sbjct: 26 GACGGLW 32


>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3 GICTGLW 9
G C GLW
Sbjct: 826 GACRGLW 832


>sp|RPOA_SHFV|REPLICASE polyprotein 1ab|Simian hemorrhagic fever virus (SHFV)

Query: 4 ICTGLWV 10
+C G WV
Sbjct: 1253 VCAGYWV 1259


>sp|UL32_PSHV1|PACKAGING protein UL32|Psittacid herpesvirus 1 (isolate Amazon

Query: 4 ICTGLWV 10
+C G+W+
Sbjct: 565 VCRGVWI 571


>sp|POLB_CHPVU|ORFB polyprotein|Cryphonectria hypovirus 1 (strain Euro7)

Query: 5 CTGLWV 10
C G+WV
Sbjct: 3089 CDGMWV 3094


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 5 CTGLWV 10
C G+WV
Sbjct: 3090 CDGMWV 3095


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1 GVGICTGLW 9
G G+C +W
Sbjct: 2056 GSGLCANMW 2064


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4 ICTGLWV 10
ICT LW+
Sbjct: 732 ICTCLWI 738


>sp|ENV_AVIRE|ENVELOPE glycoprotein|Avian reticuloendotheliosis virus

Query: 5 CTGLW 9
CTG+W
Sbjct: 164 CTGIW 168




110|Sequence|546|555|TGLWVWGRRV

>sp|TEG7_PSHV1|TEGUMENT protein UL51|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 TGLWVWGRRV 10
TG W+W +R+
Sbjct: 13 TGSWIWRQRM 22


>sp|GH_FHV1|ENVELOPE glycoprotein H|Feline herpesvirus 1 (FeHV-1) (Feline

Query: 2 GLWVWGRR 9
G+W+W R
Sbjct: 230 GMWIWSNR 237


>sp|TRM1_PSHV1|TRIPARTITE terminase subunit 1|Psittacid herpesvirus 1 (isolate Amazon

Query: 3 LWVWGRR 9
LW+W RR
Sbjct: 110 LWMWLRR 116


>sp|Y554_AFV2P|UNCHARACTERIZED protein ORF554|Acidianus filamentous virus 2 (isolate

Query: 2 GLWVWG 7
G W+WG
Sbjct: 148 GKWIWG 153


>sp|DPOL_ADEG1|DNA polymerase|Fowl adenovirus A serotype 1

Query: 1 TGLWVW 6
TG WVW
Sbjct: 8 TGEWVW 13


>sp|VG46_ICHVA|PROBABLE major glycoprotein|Ictalurid herpesvirus 1 (strain Auburn)

Query: 5 VWGRRV 10
+WGRRV
Sbjct: 503 LWGRRV 508


>sp|VF396_IIV3|UNCHARACTERIZED protein 091L|Invertebrate iridescent virus 3 (IIV-3)

Query: 2 GLWVW 6
G+WVW
Sbjct: 915 GVWVW 919


>sp|GAGC_AVISC|P47(GAG-CRK) protein|Avian sarcoma virus CT10 (Avian

Query: 2 GLWVWGR 8
G W WGR
Sbjct: 246 GSWYWGR 252


>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 GLWVWGR 8
GLW++GR
Sbjct: 12 GLWLFGR 18


>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 GLWVWGR 8
GLW++GR
Sbjct: 12 GLWLFGR 18


>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 GLWVWGR 8
GLW++GR
Sbjct: 12 GLWLFGR 18


>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate

Query: 2 GLWVW 6
G+WVW
Sbjct: 2114 GIWVW 2118


>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)

Query: 3 LWVWG 7
LW WG
Sbjct: 276 LWAWG 280


>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 LWVWG 7
LW WG
Sbjct: 276 LWAWG 280


>sp|TSP_BPBMU|TAIL sheath protein|Burkholderia phage BcepMu (isolate -/United

Query: 1 TGLWVWGRR 9
+GL +WG R
Sbjct: 350 SGLRLWGNR 358


>sp|MVP_MSTV|MOVEMENT protein|Maize stripe virus (MStV)

Query: 2 GLWVWG 7
LW WG
Sbjct: 194 ALWFWG 199


>sp|MVP_RSVT|MOVEMENT protein|Rice stripe virus (isolate T)

Query: 3 LWVWG 7
LW WG
Sbjct: 195 LWFWG 199


>sp|MVP_RSVM|MOVEMENT protein|Rice stripe virus (isolate M)

Query: 3 LWVWG 7
LW WG
Sbjct: 195 LWFWG 199


>sp|GT378_AFV2P|PUTATIVE glycosyltransferase ORF378|Acidianus filamentous virus 2 (isolate

Query: 4 WVWGRR 9
WVW R
Sbjct: 89 WVWSNR 94


>sp|POLG_PPVSK|GENOME polyprotein|Plum pox potyvirus (strain SK

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 513 GNFVWGQR 520


>sp|POLG_PPVRA|GENOME polyprotein|Plum pox potyvirus (strain Rankovic)

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 513 GNFVWGQR 520


>sp|POLG_PPVNA|GENOME polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 513 GNFVWGQR 520


>sp|POLG_PPVD|GENOME polyprotein|Plum pox potyvirus (strain D)

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 514 GNFVWGQR 521


>sp|MVP_PPVSK|P3N-PIPO polyprotein|Plum pox potyvirus (strain SK

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 513 GNFVWGQR 520


>sp|MVP_PPVNA|P3N-PIPO polyprotein|Plum pox potyvirus (isolate NAT)

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 513 GNFVWGQR 520


>sp|MVP_PPVD|P3N-PIPO polyprotein|Plum pox potyvirus (strain D)

Query: 2 GLWVWGRR 9
G +VWG+R
Sbjct: 514 GNFVWGQR 521


>sp|FUS_NPVCF|MAJOR envelope glycoprotein|Choristoneura fumiferana nuclear polyhedrosis

Query: 2 GLWVWGRRV 10
G+WV+G+ +
Sbjct: 133 GVWVFGKEL 141


>sp|VF019_IIV3|PUTATIVE MSV199 domain-containing protein 093L|Invertebrate iridescent virus

Query: 4 WVWGRR 9
W+WG +
Sbjct: 175 WIWGHQ 180




111|Sequence|551|560|WGRRVIQTMG

>sp|GAG_IPHA|INTRACISTERNAL A-particle Gag-related polyprotein|Hamster intracisternal

Query: 1 WGRRVIQTMG 10
WGR V+Q MG
Sbjct: 557 WGRDVLQAMG 566


>sp|RDRP_PAV|RNA-DIRECTED RNA polymerase|Pariacoto virus (PaV)

Query: 1 WGRRVIQTMG 10
W RRVI+ G
Sbjct: 766 WARRVIELTG 775


>sp|RDRP_BPSP|RNA-DIRECTED RNA polymerase subunit beta|Enterobacteria phage SP (Bacteriophage

Query: 1 WGRRVIQT 8
WG RVI T
Sbjct: 121 WGERVIHT 128


>sp|DNB2_ADECR|DNA-BINDING protein|Canine adenovirus serotype 1 (strain

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 253 WGRNVVQ 259


>sp|DNB2_ADECC|DNA-BINDING protein|Canine adenovirus serotype 1 (strain

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 253 WGRNVVQ 259


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 324 WGRNVVQ 330


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 324 WGRNVVQ 330


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 309 WGRNVVQ 315


>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate

Query: 2 GRRVIQTMG 10
G R++Q MG
Sbjct: 2127 GERIVQAMG 2135


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 271 WGRSVVQ 277


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 303 WGRSVVQ 309


>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 270 WGRSVVQ 276


>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12

Query: 1 WGRRVIQ 7
WGR V+Q
Sbjct: 279 WGRNVVQ 285


>sp|HMUDK_BPS10|5-HMDU DNA kinase|Bacillus phage SP10 (Bacillus phage

Query: 1 WGRRVIQ 7
W RRVIQ
Sbjct: 328 WYRRVIQ 334




112|Sequence|556|565|IQTMGKDLTP

>sp|YR073_MIMIV|UNCHARACTERIZED protein R73|Acanthamoeba polyphaga mimivirus (APMV)

Query: 1 IQTMGKDLT 9
I+ MGK+LT
Sbjct: 183 IEKMGKELT 191




113|Sequence|561|570|KDLTPITPSS

>sp|E1BS_ADEM1|E1B protein, small T-antigen|Murine adenovirus A serotype 1

Query: 2 DLTPITPSS 10
D T ITPSS
Sbjct: 63 DFTAITPSS 71


>sp|BP06_BPT4|BASEPLATE wedge protein gp6|Enterobacteria phage T4 (Bacteriophage T4)

Query: 2 DLTPITPS 9
+L PITPS
Sbjct: 400 NLAPITPS 407


>sp|VF229_IIV3|UNCHARACTERIZED protein 229L|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 KDLTPITPSS 10
D TP+TP S
Sbjct: 203 NDTTPVTPDS 212


>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 3 LTPITPSS 10
LTP+TP S
Sbjct: 1686 LTPLTPQS 1693


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 2 DLTPITPSS 10
DLTP TP++
Sbjct: 569 DLTPTTPAT 577




114|Sequence|566|575|ITPSSGFTIE

***** No hits found ******


115|Sequence|571|580|GFTIELASAF

>sp|Y1940_ATV|PROTEIN ORF1940|Acidianus two-tailed virus (ATV)

Query: 3 TIELASAF 10
TI+LASAF
Sbjct: 1032 TIDLASAF 1039




116|Sequence|576|585|LASAFTVVIA

***** No hits found ******


117|Sequence|581|590|TVVIASNIGL

>sp|YO19_ADEG1|UNCHARACTERIZED protein ORF19|Fowl adenovirus A serotype 1

Query: 2 VVIASNIG 9
VVIAS+IG
Sbjct: 72 VVIASSIG 79




118|Sequence|586|595|SNIGLPVSTT

>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV)

Query: 1 SNIGLPVST 9
SN+ LPVS+
Sbjct: 2084 SNLDLPVSS 2092


>sp|CAPSD_BBV|CAPSID protein alpha|Black beetle virus (BBV)

Query: 1 SNIGLPVSTT 10
SN+ PV+TT
Sbjct: 198 SNVQFPVATT 207


>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 SNIGLPVST 9
N+ LPVST
Sbjct: 1087 QNLSLPVST 1095




119|Sequence|591|600|PVSTTHCKVG

>sp|Y113_OSHVF|UNCHARACTERIZED protein ORF113|Ostreid herpesvirus 1 (isolate France)

Query: 4 TTHCKVG 10
TT+CK+G
Sbjct: 58 TTYCKIG 64


>sp|YL281_MIMIV|PUTATIVE FNIP repeat-containing protein L281|Acanthamoeba polyphaga

Query: 1 PVSTTHCKVG 10
P S TH K+G
Sbjct: 123 PTSVTHLKLG 132


>sp|R1A_CVPPU|REPLICASE polyprotein 1a|Porcine transmissible gastroenteritis coronavirus

Query: 3 STTHCKVG 10
+TT+C+VG
Sbjct: 2604 ATTYCRVG 2611


>sp|R1AB_CVPPU|REPLICASE polyprotein 1ab|Porcine transmissible gastroenteritis coronavirus

Query: 3 STTHCKVG 10
+TT+C+VG
Sbjct: 2604 ATTYCRVG 2611


>sp|R1AB_FIPV|REPLICASE polyprotein 1ab|Feline coronavirus (strain FIPV WSU-79/1146)

Query: 3 STTHCKVG 10
+TT+C+VG
Sbjct: 2629 ATTYCRVG 2636


>sp|VF113_ASFP4|EARLY transcription factor large subunit|African swine fever virus

Query: 1 PVSTTHCKV 9
PV TT C +
Sbjct: 570 PVGTTRCSI 578


>sp|ETFS_ASFWA|EARLY transcription factor large subunit|African swine fever virus

Query: 1 PVSTTHCKV 9
PV TT C +
Sbjct: 570 PVGTTRCSI 578


>sp|ETFS_ASFM2|EARLY transcription factor large subunit|African swine fever virus

Query: 1 PVSTTHCKV 9
PV TT C +
Sbjct: 535 PVGTTRCSI 543


>sp|ETFS_ASFK5|EARLY transcription factor large subunit|African swine fever virus

Query: 1 PVSTTHCKV 9
PV TT C +
Sbjct: 570 PVGTTRCSI 578


>sp|ETFS_ASFB7|EARLY transcription factor large subunit|African swine fever virus

Query: 1 PVSTTHCKV 9
PV TT C +
Sbjct: 570 PVGTTRCSI 578


>sp|ENV_SIVMB|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate MB66)

Query: 2 VSTTHCKVG 10
VST HC G
Sbjct: 266 VSTVHCTHG 274


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 1 PVSTTHC 7
P++ THC
Sbjct: 330 PINDTHC 336


>sp|VIE2_NPVR1|E3 ubiquitin-protein ligase IE2|Rachiplusia ou multiple

Query: 2 VSTTHC 7
V+TTHC
Sbjct: 224 VTTTHC 229


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 PVSTTHC 7
P++ THC
Sbjct: 330 PINDTHC 336


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3024 SMTYCRVG 3031


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3054 SMTYCRVG 3061


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3004 SMTYCRVG 3011


>sp|ENV_SIVCZ|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate CPZ

Query: 2 VSTTHCKVG 10
VST HC G
Sbjct: 240 VSTVHCTHG 248


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3024 SMTYCRVG 3031


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3054 SMTYCRVG 3061


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3004 SMTYCRVG 3011


>sp|ICP27_SUHVK|MRNA export factor ICP27 homolog|Suid herpesvirus 1 (strain Kaplan)

Query: 2 VSTTHCKVG 10
VS TH +VG
Sbjct: 105 VSATHARVG 113


>sp|NSS_PUUMS|NON-STRUCTURAL protein NS-S|Puumala virus (strain Sotkamo/V-2969/81)

Query: 5 THCKVG 10
THCK G
Sbjct: 29 THCKPG 34


>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 2999 SMTYCRVG 3006


>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3053 SMTYCRVG 3060


>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3056 SMTYCRVG 3063


>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3056 SMTYCRVG 3063


>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 2999 SMTYCRVG 3006


>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)

Query: 3 STTHCKVG 10
S T+C+VG
Sbjct: 3053 SMTYCRVG 3060




120|Sequence|596|605|HCKVGSVVAV

>sp|SCAF_PSHV1|CAPSID scaffolding protein|Psittacid herpesvirus 1 (isolate Amazon

Query: 2 CKVGSVVAV 10
C+VGSV+++
Sbjct: 57 CRVGSVISI 65


>sp|LEF4_NPVOP|MRNA capping enzyme LEF-4|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 HCKVGSV 7
HC VGSV
Sbjct: 342 HCAVGSV 348


>sp|DPOL_RCMVM|DNA polymerase catalytic subunit|Rat cytomegalovirus (strain

Query: 2 CKVGSVVA 9
C+VG VVA
Sbjct: 268 CQVGDVVA 275


>sp|SCAF_SUHVK|CAPSID scaffolding protein|Suid herpesvirus 1 (strain Kaplan)

Query: 2 CKVGSVVAV 10
C +G+V+AV
Sbjct: 47 CDIGAVLAV 55


>sp|TOP2_ASFWA|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 CKVGSVVAV 10
C+ GSV+A+
Sbjct: 246 CRTGSVMAL 254


>sp|TOP2_ASFP4|DNA topoisomerase 2|African swine fever virus (isolate

Query: 2 CKVGSVVAV 10
C+ GSV+A+
Sbjct: 246 CRTGSVMAL 254


>sp|TOP2_ASFB7|DNA topoisomerase 2|African swine fever virus (strain

Query: 2 CKVGSVVAV 10
C+ GSV+A+
Sbjct: 246 CRTGSVMAL 254


>sp|SCAF_BHV1C|CAPSID scaffolding protein|Bovine herpesvirus 1.1 (strain Cooper)

Query: 2 CKVGSVVAV 10
C+VG+V+A+
Sbjct: 72 CEVGAVLAL 80


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 CKVGSVVAV 10
C VG V+A+
Sbjct: 56 CVVGEVIAI 64




121|Sequence|601|610|SVVAVGWIRS

>sp|CAPSD_BPP2|CAPSID proteins|Escherichia phage P2 (Bacteriophage P2)

Query: 3 VAVGWIR 9
VAVGW++
Sbjct: 167 VAVGWLQ 173




122|Sequence|606|615|GWIRSRKAVD

>sp|POLG_EOPV|GENOME polyprotein|Ectropis obliqua picorna-like virus (EoPV)

Query: 1 GWIRSR 6
GW+RS+
Sbjct: 1446 GWVRSK 1451


>sp|YL532_MIMIV|CYTOCHROME P450-like protein L532|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 WIRSRKAV 9
W++ RKA+
Sbjct: 128 WMKQRKAI 135


>sp|POL1_BAMMN|GENOME polyprotein 1|Barley mild mosaic virus (strain

Query: 1 GWIRSRKAVD 10
GW+ KA+D
Sbjct: 100 GWLHMMKALD 109




123|Sequence|611|620|RKAVDWRLFR

>sp|RDRP_PVXHB|RNA replication protein|Potato virus X (strain HB)

Query: 2 KAVDWR 7
KAVDWR
Sbjct: 408 KAVDWR 413


>sp|RDRP_PVXCP|RNA replication protein|Potato virus X (strain CP)

Query: 2 KAVDWR 7
KAVDWR
Sbjct: 408 KAVDWR 413


>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 RKAVDWRLF 9
+KA WRLF
Sbjct: 35 KKAFYWRLF 43


>sp|P2_RGDV|MINOR outer capsid protein P2|Rice gall dwarf virus (RGDV)

Query: 2 KAVDWRL 8
KAVDW L
Sbjct: 1024 KAVDWTL 1030


>sp|GC_EHV1D|ENVELOPE glycoprotein C|Equine herpesvirus 1 (strain Kentucky

Query: 2 KAVDWR 7
K+VDWR
Sbjct: 185 KSVDWR 190


>sp|GC_EHV1B|ENVELOPE glycoprotein C|Equine herpesvirus 1 (strain Ab4p)

Query: 2 KAVDWR 7
K+VDWR
Sbjct: 185 KSVDWR 190


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 RKAVDW 6
+KAVDW
Sbjct: 1132 QKAVDW 1137


>sp|LT_POVM3|LARGE T antigen|Murine polyomavirus (strain A3) (MPyV)

Query: 1 RKAVDW 6
+KAVDW
Sbjct: 416 QKAVDW 421


>sp|LT_POVM1|LARGE T antigen|Mus musculus polyomavirus 1 (MPyV)

Query: 1 RKAVDW 6
+KAVDW
Sbjct: 416 QKAVDW 421


>sp|LT_POVBG|LARGE T antigen|Murine polyomavirus (strain BG) (MPyV)

Query: 1 RKAVDW 6
+KAVDW
Sbjct: 416 QKAVDW 421


>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)

Query: 1 RKAVDWRL 8
R AVDW +
Sbjct: 357 RPAVDWNI 364


>sp|LT_POVMC|LARGE T antigen|Murine polyomavirus (strain Crawford small-plaque)

Query: 1 RKAVDW 6
+KAVDW
Sbjct: 411 QKAVDW 416


>sp|LT_POVMA|LARGE T antigen|Murine polyomavirus (strain A2) (MPyV)

Query: 1 RKAVDW 6
+KAVDW
Sbjct: 415 QKAVDW 420




124|Sequence|616|625|WRLFRNIFVA

>sp|BRLF1_EHV2|PUTATIVE transcription activator BRLF1 homolog|Equine herpesvirus 2

Query: 1 WRLFRN 6
W LFRN
Sbjct: 86 WNLFRN 91


>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 1 WRLFRNIFVA 10
WR +IF A
Sbjct: 539 WRFMNSIFTA 548


>sp|BRLF1_BHV4D|PUTATIVE transcription activator BRLF1 homolog|Bovine herpesvirus 4

Query: 1 WRLFRN 6
W LFRN
Sbjct: 92 WTLFRN 97


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 1 WRLFRNIFVA 10
WR +IF A
Sbjct: 539 WRFMNSIFTA 548


>sp|POLB_CHPVE|ORFB polyprotein|Cryphonectria hypovirus 1 (strain EP713)

Query: 1 WRLFRNI 7
WRLF N+
Sbjct: 2614 WRLFANL 2620


>sp|VP5_APRVF|OUTER capsid protein VP5|Aedes pseudoscutellaris reovirus (isolate

Query: 1 WRLFRNIFV 9
W L ++IFV
Sbjct: 188 WHLHKHIFV 196


>sp|BP140_BPT5|BASEPLATE tube protein p140|Escherichia phage T5 (Enterobacteria phage

Query: 1 WRLFRNIF 8
WR RNIF
Sbjct: 195 WREDRNIF 202


>sp|ENV_CAEVG|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain

Query: 1 WRLFRN 6
WR++RN
Sbjct: 498 WRIYRN 503




125|Sequence|621|630|NIFVAWFVTV

>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)

Query: 2 IFVAWFVTV 10
IFVAWF+ +
Sbjct: 410 IFVAWFLNI 418


>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)

Query: 2 IFVAWFVTV 10
IFVAWF+ +
Sbjct: 410 IFVAWFLNI 418


>sp|TNPA_BPMU|DDE-RECOMBINASE A|Escherichia phage Mu (Bacteriophage Mu)

Query: 1 NIFVAWF 7
N+FV WF
Sbjct: 274 NVFVRWF 280


>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)

Query: 1 NIFVAWFVTV 10
NIF +WF V
Sbjct: 172 NIFSSWFSVV 181


>sp|NS1A_TASV1|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 1 (TAstV-1)

Query: 1 NIFVAW 6
N+FVAW
Sbjct: 401 NLFVAW 406


>sp|NS1AB_TASV1|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 1 (TAstV-1)

Query: 1 NIFVAW 6
N+FVAW
Sbjct: 401 NLFVAW 406


>sp|YR549_MIMIV|UNCHARACTERIZED protein R549|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 FVAWFVTV 10
FV+W++TV
Sbjct: 117 FVSWYLTV 124


>sp|TEG7_PSHV1|TEGUMENT protein UL51|Psittacid herpesvirus 1 (isolate Amazon

Query: 1 NIFVAWFVT 9
NIF+A +VT
Sbjct: 5 NIFLALYVT 13


>sp|VGA_BPPHK|A protein|Enterobacteria phage phiK (Bacteriophage phi-K)

Query: 4 VAWFVT 9
VAW+VT
Sbjct: 324 VAWYVT 329


>sp|VGA_BPAL3|A protein|Escherichia phage alpha3 (Bacteriophage alpha-3)

Query: 4 VAWFVT 9
VAW+VT
Sbjct: 324 VAWYVT 329


>sp|50511_ASFM2|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 FVAWFVT 9
+AWFVT
Sbjct: 183 LIAWFVT 189


>sp|50511_ASFB7|PROTEIN MGF 505-11L|African swine fever virus (strain

Query: 3 FVAWFVT 9
+AWFVT
Sbjct: 183 LIAWFVT 189


>sp|PORTL_GAHVM|PORTAL protein|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC

Query: 1 NIFVAWFVTV 10
N+FV W T+
Sbjct: 140 NVFVTWRKTL 149


>sp|50511_ASFWA|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 FVAWFVT 9
+AWFVT
Sbjct: 183 LIAWFVT 189


>sp|50511_ASFP4|PROTEIN MGF 505-11L|African swine fever virus (isolate

Query: 3 FVAWFVT 9
+AWFVT
Sbjct: 183 LIAWFVT 189


>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3

Query: 2 IFVAWFVTV 10
+FV+ FVTV
Sbjct: 82 VFVSCFVTV 90


>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain

Query: 1 NIFVAWFVTV 10
NIFV + VT+
Sbjct: 3409 NIFVCFVVTI 3418




126|Sequence|626|635|WFVTVPVAGL

>sp|ETF1_MSEPV|EARLY transcription factor 70 kDa|Melanoplus sanguinipes entomopoxvirus

Query: 1 WFVTVP 6
WF+TVP
Sbjct: 463 WFLTVP 468


>sp|FUS_SENDZ|FUSION glycoprotein F0|Sendai virus (strain Z) (SeV)

Query: 1 WFVTVP 6
W+VTVP
Sbjct: 315 WYVTVP 320


>sp|FUS_SENDO|FUSION glycoprotein F0|Sendai virus (strain Ohita) (SeV)

Query: 1 WFVTVP 6
W+VTVP
Sbjct: 315 WYVTVP 320


>sp|FUS_SENDH|FUSION glycoprotein F0|Sendai virus (strain Harris) (SeV)

Query: 1 WFVTVP 6
W+VTVP
Sbjct: 315 WYVTVP 320


>sp|FUS_SENDF|FUSION glycoprotein F0|Sendai virus (strain Fushimi) (SeV)

Query: 1 WFVTVP 6
W+VTVP
Sbjct: 315 WYVTVP 320


>sp|FUS_SENDA|FUSION glycoprotein F0|Sendai virus (strain Hamamatsu) (SeV)

Query: 1 WFVTVP 6
W+VTVP
Sbjct: 315 WYVTVP 320


>sp|R1AB_BEV|REPLICASE polyprotein 1ab|Berne virus (BEV)

Query: 1 WFVTVPV 7
WFV +PV
Sbjct: 4289 WFVQIPV 4295


>sp|R1A_BEV|REPLICASE polyprotein 1a|Berne virus (BEV)

Query: 1 WFVTVPV 7
WFV +PV
Sbjct: 4289 WFVQIPV 4295


>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 436 WFMTIP 441


>sp|ETF1_VARV|EARLY transcription factor 70 kDa|Variola virus

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_VAR67|EARLY transcription factor 70 kDa|Variola virus (isolate

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_VACCW|EARLY transcription factor 70 kDa|Vaccinia virus (strain Western Reserve)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_VACCT|EARLY transcription factor 70 kDa|Vaccinia virus (strain Tian Tan)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_VACCC|EARLY transcription factor 70 kDa|Vaccinia virus (strain Copenhagen)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_VACCA|EARLY transcription factor 70 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_RFVKA|EARLY transcription factor 70 kDa|Rabbit fibroma virus (strain Kasza)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 436 WFMTIP 441


>sp|ETF1_MYXVL|EARLY transcription factor 70 kDa|Myxoma virus (strain Lausanne) (MYXV)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 436 WFMTIP 441


>sp|ETF1_MONPV|EARLY transcription factor 70 kDa|Monkeypox virus (MPXV)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 437 WFMTIP 442


>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 436 WFMTIP 441


>sp|ETF1_FOWPN|EARLY transcription factor 70 kDa|Fowlpox virus (strain NVSL) (FPV)

Query: 1 WFVTVP 6
WF+T+P
Sbjct: 436 WFMTIP 441


>sp|NS1A_TASV2|NON-STRUCTURAL polyprotein 1A|Turkey astrovirus 2 (TAstV-2)

Query: 1 WFVTVPV 7
WF+ +PV
Sbjct: 414 WFLNIPV 420


>sp|G4P_BPIKE|VIRION export protein|Salmonella phage IKe (Bacteriophage IKe)

Query: 1 WFVTVPVAG 9
WF +VPV G
Sbjct: 402 WFESVPVIG 410


>sp|NS1AB_TASV2|NON-STRUCTURAL polyprotein 1AB|Turkey astrovirus 2 (TAstV-2)

Query: 1 WFVTVPV 7
WF+ +PV
Sbjct: 414 WFLNIPV 420




127|Sequence|631|640|PVAGLFSAAV

>sp|YL037_MIMIV|PUTATIVE KilA-N domain-containing protein L37|Acanthamoeba polyphaga

Query: 1 PVAGLFSA 8
PVAGLF A
Sbjct: 234 PVAGLFIA 241


>sp|BRLF1_EHV2|PUTATIVE transcription activator BRLF1 homolog|Equine herpesvirus 2 (strain

Query: 1 PVAGLFSAA 9
P AG+FSA+
Sbjct: 240 PHAGIFSAS 248


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 VAGLFSAAV 10
VAG+F AAV
Sbjct: 1176 VAGIFRAAV 1184


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 VAGLFSAAV 10
VAG+F AAV
Sbjct: 1182 VAGIFRAAV 1190


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 VAGLFSAAV 10
VAG+F AAV
Sbjct: 1182 VAGIFRAAV 1190


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 VAGLFSAAV 10
VAG+F AAV
Sbjct: 1178 VAGIFRAAV 1186


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 VAGLFSAAV 10
VAG+F AAV
Sbjct: 1177 VAGIFRAAV 1185


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 VAGLFSAAV 10
VAG+F AAV
Sbjct: 1181 VAGIFRAAV 1189


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 AGLFSAA 9
AGLFSAA
Sbjct: 65 AGLFSAA 71


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 AGLFSAA 9
AGLFSAA
Sbjct: 65 AGLFSAA 71


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 AGLFSAA 9
AGLFSAA
Sbjct: 65 AGLFSAA 71




128|Sequence|636|645|FSAAVMALLM

***** No hits found ******


129|Sequence|641|652|MALLMYGILPYV

>sp|POLG_MNV1|GENOME polyprotein|Norovirus (isolate Mouse/NoV/United States/MNV1/2002/GV)

Query: 1 MALLMYGILP 10
MAL YG+LP
Sbjct: 1540 MALRRYGLLP 1549


>sp|YD3_MDBVW|UNCHARACTERIZED protein D3|Microplitis demolitor bracovirus (isolate Webb)

Query: 1 MALLMYGILPYV 12
+ + +YG LPYV
Sbjct: 30 LGIHLYGFLPYV 41


>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote

Query: 1 MALLMYGILPY 11
M L +Y ILPY
Sbjct: 1185 MFLSIYNILPY 1195


>sp|FADL_BPPAM|FLAVIN-DEPENDENT lyase|Pseudomonas phage PaMx11

Query: 5 MYGILPYV 12
+YGI PY+
Sbjct: 238 LYGIRPYI 245


>sp|DPO23_BPK64|PROBABLE tail spike protein|Klebsiella phage K64-1 (Bacteriophage K64-1)

Query: 5 MYGILPYV 12
MYG++P V
Sbjct: 174 MYGVMPIV 181


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1 MALLMYGILPY 11
MALL+Y +L +
Sbjct: 1683 MALLLYDVLGF 1693


>sp|POLG_PESV|GENOME polyprotein|Porcine enteric sapovirus (isolate Swine/United

Query: 1 MALLMYGILP 10
+A L YGI+P
Sbjct: 263 LAELYYGIMP 272


>sp|DPOL_GAHVM|DNA polymerase catalytic subunit|Gallid herpesvirus 2 (strain

Query: 1 MALLMYGILPY 11
+A+ +YGI PY
Sbjct: 174 VAVHVYGIKPY 184


>sp|ENV_SRV1|ENVELOPE glycoprotein|Simian retrovirus SRV-1

Query: 6 YGILPYV 12
+G+LPYV
Sbjct: 521 HGLLPYV 527


>sp|DPOL_BPSP2|DNA polymerase|Bacillus phage SP02 (Bacteriophage SP02)

Query: 4 LMYGILPYV 12
L+YG +P+V
Sbjct: 357 LLYGQVPFV 365


>sp|PB2_QRFVE|POLYMERASE basic protein 2|Quaranfil virus (isolate

Query: 2 ALLMYGILP 10
A++ YGI+P
Sbjct: 153 AIIRYGIVP 161


>sp|AC18_NPVAC|PROTEIN AC18|Autographa californica nuclear polyhedrosis virus

Query: 4 LMYGILPYV 12
L G+LPY+
Sbjct: 8 LNLGVLPYI 16


>sp|NS5_LDCPR|NON-STRUCTURAL protein 5|Lymantria dispar cypovirus 1 (isolate

Query: 1 MALLMYGILPYV 12
+ L YG+ P++
Sbjct: 200 IQLYQYGVTPFI 211






THE END