S20A2_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|VMWLYEDMAM

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 VMWLYEDMA 9
V W+YE MA
Sbjct: 260 VRWIYERMA 268


>sp|NDK_HALSA|NUCLEOSIDE diphosphate kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WLYEDMA 9
W+YED+A
Sbjct: 152 WVYEDLA 158


>sp|NDK_HALS3|NUCLEOSIDE diphosphate kinase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WLYEDMA 9
W+YED+A
Sbjct: 152 WVYEDLA 158


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 WLYEDM 8
W+YE+M
Sbjct: 145 WIYENM 150


>sp|NDK_HALLT|NUCLEOSIDE diphosphate kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 WLYED 7
W+YED
Sbjct: 152 WVYED 156




2|SequenceR|15|6|IFGLIVMWLY

>sp|YPZ2_METTF|UNCHARACTERIZED protein ORF2'|Methanothermobacter thermautotrophicus

Query: 2 FGLIVMWLY 10
FGL V W Y
Sbjct: 201 FGLYVDWNY 209


>sp|Y545_METJA|UNCHARACTERIZED protein MJ0545|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFGLIVMWL 9
+FG +VM++
Sbjct: 240 VFGFVVMYI 248


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 IFGLIVMWL 9
IFG + +W+
Sbjct: 233 IFGAVAVWV 241


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GLIVMWL 9
GL+V WL
Sbjct: 261 GLVVPWL 267


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IFGLIVMWL 9
+FG I +W+
Sbjct: 221 VFGAIAVWV 229


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IFGLIVMWLY 10
+FG +MW++
Sbjct: 416 VFGYFIMWIF 425


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 IFGLIVMWLY 10
+FG+I +W +
Sbjct: 377 VFGIIAVWPF 386




3|SequenceR|20|11|LIFAIIFGLI

>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LIFAIIFGLI 10
L+ AII GLI
Sbjct: 14 LMLAIIMGLI 23


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 3 FAIIFGLI 10
FA++FG I
Sbjct: 182 FAVVFGAI 189


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 LIFAIIFGL 9
LI+A IFGL
Sbjct: 163 LIYAAIFGL 171


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 LIFAIIFGL 9
LI+A IFGL
Sbjct: 163 LIYAAIFGL 171


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 1 LIFAIIFGL 9
LI+A IFGL
Sbjct: 163 LIYAAIFGL 171




4|SequenceR|25|16|GVSFALIFAI

>sp|ENGB_METBF|PROBABLE GTP-binding protein EngB|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVSFALIF 8
GVSF +IF
Sbjct: 11 GVSFEIIF 18


>sp|DGGGP_KORCO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GVSFALIF 8
GV+F LIF
Sbjct: 137 GVAFTLIF 144




5|SequenceR|30|21|AVDNAGVSFA

>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VDNAGVSFA 10
VDN GV+F
Sbjct: 133 VDNVGVTFG 141


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VDNAGVSFA 10
+DN GV+F
Sbjct: 132 IDNVGVTFG 140


>sp|KAE1B_METS3|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 AVDNAGVSF 9
A+D AG+S+
Sbjct: 62 AIDEAGISY 70


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VDNAGVSF 9
+DN+ VSF
Sbjct: 273 IDNSNVSF 280


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 AVDNAGV 7
VDNAGV
Sbjct: 76 GVDNAGV 82




6|SequenceR|35|26|TGFSNAVDNA

>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FSNAVDN 9
F NAVDN
Sbjct: 555 FKNAVDN 561


>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 1 TGFSNAVDN 9
TGF+N DN
Sbjct: 135 TGFANIADN 143


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GFSNAV 7
GFSNAV
Sbjct: 473 GFSNAV 478


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GFSNAV 7
GFSNAV
Sbjct: 473 GFSNAV 478


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GFSNAV 7
GFSNAV
Sbjct: 473 GFSNAV 478


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GFSNAV 7
GFSNAV
Sbjct: 473 GFSNAV 478


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFSNAVD 8
G+SNA+D
Sbjct: 572 GYSNALD 578


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GFSNAVDNA 10
GF +A+DN
Sbjct: 564 GFESAMDNG 572


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 2 GFSNAVDNA 10
GFS +DNA
Sbjct: 264 GFSETLDNA 272


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 1 TGFSNAVDN 9
TG+ NA+ N
Sbjct: 82 TGYRNAISN 90




7|SequenceR|40|31|GSGVATGFSN

>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SGVATGFSN 10
S VATGFS+
Sbjct: 454 SRVATGFSD 462


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 SGVATGFSN 10
S VATGFS+
Sbjct: 454 SRVATGFSD 462


>sp|DNLI_METBU|DNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 VATGFSN 10
VATGFS+
Sbjct: 480 VATGFSD 486


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVATGFSN 10
G+ATGF++
Sbjct: 179 GIATGFAS 186




8|SequenceR|45|36|RLTVVGSGVA

>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LTVVGSGVA 10
+ VVGSG+A
Sbjct: 7 VVVVGSGIA 15


>sp|Y1037_META3|UPF0179 protein Maeo_1037|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RLTVVGSGVA 10
R+T++GS +A
Sbjct: 4 RITLIGSKIA 13


>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LTVVGSGVA 10
++GSGVA
Sbjct: 4 FAIIGSGVA 12


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLTVVGSGVA 10
++ VVGSG+A
Sbjct: 2 KVAVVGSGLA 11


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RLTVVGSGVA 10
+L VVG+G+A
Sbjct: 190 KLLVVGAGMA 199


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 LTVVGSGV 9
+TV+GSGV
Sbjct: 34 VTVLGSGV 41




9|SequenceR|50|41|LICAQRLTVV

>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 2 ICAQRLTVV 10
+CA LT+V
Sbjct: 65 LCAHTLTIV 73




10|SequenceR|55|46|EFISALICAQ

>sp|AROK_ARCFU|SHIKIMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FISALICA 9
F++ALICA
Sbjct: 85 FVNALICA 92


>sp|END3_SULAC|ENDONUCLEASE III|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EFISALICAQ 10
EFIS+ IC +
Sbjct: 21 EFISSYICGK 30


>sp|Y198_METJA|UNCHARACTERIZED protein MJ0198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFISALIC 8
+FI +LIC
Sbjct: 66 DFIDSLIC 73




11|SequenceR|60|51|VSGTTEFISA

>sp|MFNA_METAR|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocella arvoryzae (strain

Query: 1 VSGTTEF 7
V+GTTEF
Sbjct: 164 VAGTTEF 170


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VSGTTEFI 8
V G+TEFI
Sbjct: 9 VCGSTEFI 16


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 1 VSGTTEFI 8
V G+TEFI
Sbjct: 9 VCGSTEFI 16


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 1 VSGTTEFI 8
V G+TEFI
Sbjct: 9 VCGSTEFI 16


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 1 VSGTTEF 7
++GTTEF
Sbjct: 165 IAGTTEF 171


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 VSGTTEFIS 9
V G TEFI+
Sbjct: 70 VDGNTEFIA 78


>sp|MFNA_METBU|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcoides burtonii

Query: 1 VSGTTEF 7
++GTTEF
Sbjct: 166 IAGTTEF 172




12|SequenceR|65|56|KAGLLVSGTT

>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KAGLLVSGTT 10
KAG+ +SGT+
Sbjct: 81 KAGIEISGTS 90


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GLLVSGTT 10
GLLV+GTT
Sbjct: 39 GLLVAGTT 46


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KAGLLVSGTT 10
KAGL V GT+
Sbjct: 27 KAGLKVCGTS 36


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GLLVSGTT 10
GL++SGT+
Sbjct: 477 GLIISGTS 484


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GLLVSGTT 10
GL++SGT+
Sbjct: 482 GLIISGTS 489


>sp|Y531_METJA|UNIVERSAL stress protein MJ0531|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KAGLLVSGTT 10
KA L+V GTT
Sbjct: 127 KADLIVMGTT 136


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KAGLLVSGT 9
KAG + SGT
Sbjct: 468 KAGFVFSGT 476


>sp|RL35A_AERPE|LARGE ribosomal subunit protein eL33|Aeropyrum pernix (strain ATCC

Query: 1 KAGLLVSG 8
KAGL VSG
Sbjct: 34 KAGLYVSG 41


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KAGLLVSG 8
+AGL+VSG
Sbjct: 472 EAGLVVSG 479


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KAGLLVSG 8
+AGL+VSG
Sbjct: 472 EAGLVVSG 479


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 1 KAGLLVSGT 9
KAG+ V+GT
Sbjct: 63 KAGIEVAGT 71


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 1 KAGLLVSGT 9
KAGL V+G+
Sbjct: 63 KAGLTVAGS 71


>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KAGLLVSGT 9
KAG+ V+GT
Sbjct: 62 KAGIEVAGT 70


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 3 GLLVSGT 9
GLLV+GT
Sbjct: 137 GLLVAGT 143


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KAGLLVSGTT 10
K GL++SG +
Sbjct: 476 KGGLVISGVS 485


>sp|Y790_METJA|UNCHARACTERIZED protein MJ0790|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAGLLVSG 8
K GLL+SG
Sbjct: 46 KRGLLISG 53




13|SequenceR|70|61|ITEGVKAGLL

>sp|MOBA_METMA|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina mazei

Query: 3 EGVKAGLL 10
EG++AGLL
Sbjct: 97 EGIRAGLL 104


>sp|UPPS_METTH|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanothermobacter

Query: 1 ITEGVKAGLL 10
I E VKAGL+
Sbjct: 168 IAEDVKAGLI 177


>sp|MOBA_METAC|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina acetivorans

Query: 3 EGVKAGLL 10
EG++AGLL
Sbjct: 97 EGIRAGLL 104


>sp|RACD_THEK8|ASPARTATE racemase|Thermococcus sp. (strain KS-8)

Query: 1 ITEGVKAGLL 10
I EGVKAG L
Sbjct: 161 IYEGVKAGNL 170


>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 2 TEGVKAG 8
TEG KAG
Sbjct: 73 TEGAKAG 79


>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITEGVKAGLL 10
I EGVKAG L
Sbjct: 159 IYEGVKAGNL 168


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 TEGVKAGL 9
T G+KAGL
Sbjct: 588 TSGMKAGL 595


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 ITEGVKAGL 9
+TE VKAG+
Sbjct: 53 VTEAVKAGI 61


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 ITEGVKA 7
ITEGVK+
Sbjct: 396 ITEGVKS 402




14|SequenceR|75|66|IIGKRITEGV

>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain

Query: 2 IGKRITEGV 10
IGK++ EGV
Sbjct: 83 IGKQVAEGV 91


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 IGKRITEGV 10
IGK++ EGV
Sbjct: 83 IGKQVAEGV 91


>sp|CBID_METBF|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IIGKRITEGV 10
+IG RI+EG+
Sbjct: 251 MIGSRISEGL 260


>sp|TRPD_METS5|ANTHRANILATE phosphoribosyltransferase|Metallosphaera sedula (strain ATCC

Query: 4 KRITEGV 10
KR+TEGV
Sbjct: 8 KRLTEGV 14


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 IGKRITEG 9
IGK +TEG
Sbjct: 314 IGKALTEG 321


>sp|CBID_METMA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IIGKRITEGV 10
++G RI+EG+
Sbjct: 251 MVGSRISEGL 260


>sp|CBID_METAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 IIGKRITEGV 10
++G RI+EG+
Sbjct: 251 MVGSRISEGL 260


>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IGKRITEGV 10
GK+ITE V
Sbjct: 179 FGKKITEAV 187


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19 /

Query: 2 IGKRITEGV 10
+GKRI +GV
Sbjct: 92 LGKRIRQGV 100


>sp|RS15_METKA|SMALL ribosomal subunit protein uS15|Methanopyrus kandleri (strain AV19

Query: 1 IIGKRITE 8
I GK+ITE
Sbjct: 66 ITGKKITE 73


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 1 IIGKRITEG 9
++GK+ EG
Sbjct: 136 VVGKKFAEG 144


>sp|Y748_ARCFU|UNCHARACTERIZED protein AF_0748|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IGKRITEGV 10
+G+R+ EGV
Sbjct: 183 VGERVVEGV 191


>sp|ILVD_METHJ|DIHYDROXY-ACID dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IIGKRITEGV 10
++G+R+ EG+
Sbjct: 52 VLGERVREGI 61


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain

Query: 1 IIGKRITEGV 10
+IGK++T G+
Sbjct: 86 LIGKKLTRGL 95


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IGKRITEG 9
+ KR+TEG
Sbjct: 283 LAKRLTEG 290


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IIGKRITEG 9
++GK IT+G
Sbjct: 82 LLGKHITQG 90


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGKRITEGV 10
+ KR+ EG+
Sbjct: 243 VAKRVVEGI 251


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 4 KRITEG 9
KRITEG
Sbjct: 314 KRITEG 319


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 3 GKRITEG 9
GKRITE
Sbjct: 366 GKRITEA 372


>sp|FTSZ1_PYRHO|CELL division protein FtsZ 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IIGKRITEGV 10
+IGK IT G+
Sbjct: 90 LIGKEITRGL 99




15|SequenceR|80|71|YLNVDIIGKR

>sp|TRUA_METJA|TRNA pseudouridine synthase A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YLNVDIIGK 9
YL VDIIG+
Sbjct: 157 YLTVDIIGE 165


>sp|IDI2_METMA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LNVDIIGKR 10
L+VD +GKR
Sbjct: 50 LSVDFLGKR 58


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YLNVDIIGK 9
YLNV+ +GK
Sbjct: 198 YLNVNSVGK 206


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YLNVDIIGK 9
+++VDI+GK
Sbjct: 140 WIHVDIVGK 148


>sp|Y1572_ARCFU|UNCHARACTERIZED protein AF_1572|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VDIIGKR 10
VDI+GKR
Sbjct: 93 VDILGKR 99


>sp|Y2171_ARCFU|UNCHARACTERIZED protein AF_2171|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VDIIGKR 10
VDI GKR
Sbjct: 166 VDIFGKR 172


>sp|HIS4_METLZ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocorpusculum labreanum

Query: 1 YLNVDIIGKR 10
Y NVD+ G++
Sbjct: 164 YTNVDVEGQQ 173


>sp|MCH_METS3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YLNVDIIGK 9
Y+NVD++ K
Sbjct: 309 YVNVDLLKK 317


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YLNVDIIGK 9
Y+N+D GK
Sbjct: 111 YVNIDYFGK 119


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YLNVDI 6
YLN+DI
Sbjct: 300 YLNIDI 305


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YLNVDIIG 8
YL+ DIIG
Sbjct: 360 YLDKDIIG 367




16|SequenceR|85|76|EVTENYLNVD

>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 EVTENYLNVD 10
E+ ENY+N D
Sbjct: 407 ELMENYINAD 416


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EVTENYLNV 9
+V ENYLN+
Sbjct: 156 QVQENYLNL 164


>sp|HIS6_HALWD|IMIDAZOLE glycerol phosphate synthase subunit|Haloquadratum walsbyi (strain

Query: 1 EVTENYLNVD 10
E ENYL+VD
Sbjct: 142 EQGENYLSVD 151


>sp|MCRD_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 1 EVTENYLN 8
E TEN+LN
Sbjct: 15 ETTENFLN 22


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 EVTENYLN 8
++TE+YLN
Sbjct: 438 QLTEDYLN 445


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 1 EVTENYL 7
E+TENY+
Sbjct: 242 ELTENYI 248


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VTENYLNVD 10
VT+N+++VD
Sbjct: 9 VTDNHIHVD 17


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EVTENYLNVD 10
++ E Y+NVD
Sbjct: 851 KLAEGYVNVD 860


>sp|GFCR_METAR|TRANSCRIPTIONAL regulator GfcR|Methanocella arvoryzae (strain DSM 22066

Query: 2 VTENYLNV 9
V+ENY NV
Sbjct: 138 VSENYANV 145




17|SequenceR|90|81|GAMLTEVTEN

>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 AMLTEVTE 9
AMLTEVTE
Sbjct: 228 AMLTEVTE 235


>sp|KAE1_METAR|TRNA N6-adenosine threonylcarbamoyltransferase|Methanocella arvoryzae

Query: 2 AMLTEVTE 9
AML EVTE
Sbjct: 228 AMLVEVTE 235


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
+MLTE+TE
Sbjct: 229 SMLTEITE 236


>sp|KAE1B_HALMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
AMLTEV+E
Sbjct: 244 AMLTEVSE 251


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
+MLTE+TE
Sbjct: 236 SMLTEITE 243


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
+MLTE+TE
Sbjct: 235 SMLTEITE 242


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 2 AMLTEVTEN 10
AML EVTE
Sbjct: 229 AMLVEVTER 237


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
+MLTE+TE
Sbjct: 235 SMLTEITE 242


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
AMLTEV E
Sbjct: 229 AMLTEVAE 236


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
+MLTE+TE
Sbjct: 235 SMLTEITE 242


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTEN 10
AMLTEV E
Sbjct: 234 AMLTEVAER 242


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
+MLTE+TE
Sbjct: 235 SMLTEITE 242


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides burtonii

Query: 2 AMLTEVTEN 10
AML EVTE
Sbjct: 233 AMLVEVTER 241


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AMLTEVTE 9
AML EVTE
Sbjct: 231 AMLCEVTE 238


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AMLTEVTEN 10
AM++ VTEN
Sbjct: 509 AMISVVTEN 517


>sp|HEM3_SULTO|PROBABLE porphobilinogen deaminase|Sulfurisphaera tokodaii (strain DSM

Query: 3 MLTEVTEN 10
+LTE++EN
Sbjct: 79 ILTEISEN 86


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 2 AMLTEVTEN 10
AML E+TE
Sbjct: 236 AMLVEITER 244


>sp|APGM2_ARCFU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAMLTEV 7
GAM+TEV
Sbjct: 224 GAMITEV 230


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAMLTEVTEN 10
GA++T +T+N
Sbjct: 35 GAIITTLTDN 44


>sp|DPCKG_METBU|GTP-DEPENDENT dephospho-CoA kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GAMLTEVTEN 10
G ML VTE+
Sbjct: 146 GVMLVRVTES 155


>sp|FKBPS_METTL|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermococcus

Query: 2 AMLTEVTEN 10
A +TEVT+N
Sbjct: 117 ATITEVTDN 125


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 4 LTEVTEN 10
LTEVT+N
Sbjct: 682 LTEVTDN 688




18|SequenceR|95|86|MASVEGAMLT

>sp|CPGS_METST|CYCLIC 2,3-diphosphoglycerate synthetase|Methanosphaera stadtmanae (strain

Query: 4 VEGAMLT 10
VEGAM+T
Sbjct: 242 VEGAMMT 248


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 MASVEGAML 9
MA ++GAM+
Sbjct: 25 MAPIDGAMI 33




19|SequenceR|100|91|VASGVMASVE

>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 1 VASGVMASV 9
+ASGVMA +
Sbjct: 13 IASGVMAEL 21


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 1 VASGVMASV 9
+ASGVMA +
Sbjct: 13 IASGVMAEL 21




20|SequenceR|105|96|AILQWVASGV

>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AILQWVASGV 10
A+ QW ASGV
Sbjct: 539 ALRQWAASGV 548


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LQWVASG 9
LQW+A+G
Sbjct: 1807 LQWIANG 1813


Query: 4 QWVASG 9
QW+A+G
Sbjct: 1478 QWIANG 1483


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QWVASGV 10
+WVA+GV
Sbjct: 78 KWVAAGV 84


>sp|RADB_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 2 ILQWVA 7
+LQW+A
Sbjct: 140 VLQWIA 145


>sp|RNH2_ARCFU|RIBONUCLEASE HII|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 QWVASG 9
+W+ASG
Sbjct: 176 EWIASG 181




21|SequenceR|110|101|LRLFSAILQW

>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 1 LRLFSAILQW 10
LRLF ++++W
Sbjct: 214 LRLFESLVEW 223


>sp|PURQ_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LRLFSAILQW 10
L++F +I++W
Sbjct: 211 LKVFKSIVEW 220


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 LRLFSAILQW 10
L+LF ++++W
Sbjct: 211 LKLFRSMVEW 220




22|SequenceR|115|106|TGSIPLRLFS

>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 TGSIPLRLF 9
TGS+ LRL+
Sbjct: 329 TGSVNLRLY 337


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 SIPLRLF 9
S+PLR+F
Sbjct: 309 SLPLRMF 315


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 IPLRLFS 10
+P+RLFS
Sbjct: 207 LPIRLFS 213


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSIPLRLFS 10
G+IP+ +FS
Sbjct: 213 GAIPIAVFS 221


>sp|PAN_METAR|PROTEASOME-ACTIVATING nucleotidase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TGSIPLRLFS 10
TG +PL FS
Sbjct: 15 TGEVPLSDFS 24




23|SequenceR|120|111|GVICHTGSIP

>sp|HIS3_SACS2|PHOSPHORIBOSYL-AMP cyclohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVICHTGS 8
G ICHTG+
Sbjct: 62 GPICHTGN 69


>sp|ENO_METAR|ENOLASE arvoryzae (strain DSM 22066

Query: 1 GVICHTG 7
G+ICH G
Sbjct: 184 GIICHKG 190


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 4 CHTGSIP 10
CHT S+P
Sbjct: 256 CHTASLP 262


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVICHTGSIP 10
GVI HT IP
Sbjct: 574 GVIVHTVDIP 583


>sp|HIS3_SULTO|PHOSPHORIBOSYL-AMP cyclohydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVICHTGS 8
G +CHTG+
Sbjct: 99 GPVCHTGN 106


>sp|HIS3_PYRAE|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVICHTGS 8
G CHTGS
Sbjct: 103 GAACHTGS 110


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 3 ICHTGSIP 10
+CHT SIP
Sbjct: 515 MCHTLSIP 522


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GVICHT 6
G++CHT
Sbjct: 580 GIVCHT 585


>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 GVICHTGSIP 10
+IC+T +IP
Sbjct: 110 AIICNTCTIP 119


>sp|ACYP_NATPD|ACYLPHOSPHATASE pharaonis (strain ATCC 35678

Query: 4 CHTGS 8
CHTGS
Sbjct: 63 CHTGS 67


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GVICHTGSIP 10
GVIC++ ++P
Sbjct: 179 GVICNSRNLP 188


>sp|ACYP_HALWD|ACYLPHOSPHATASE walsbyi (strain DSM 16790

Query: 4 CHTGS 8
CHTGS
Sbjct: 64 CHTGS 68


>sp|HIS3_PYRCJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVICHTGS 8
G CHTG+
Sbjct: 103 GAACHTGA 110


>sp|HIS3_METJA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVICHTG 7
GV CH G
Sbjct: 97 GVACHEG 103


>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus (strain

Query: 1 GVICHTGS 8
G CHTG+
Sbjct: 93 GPACHTGN 100


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 ICHTGSIP 10
I HTGS P
Sbjct: 211 IVHTGSAP 218


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GVICHTGSIP 10
G++C TG P
Sbjct: 266 GIVCLTGLSP 275


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 GVICHTGS 8
GVIC+T S
Sbjct: 141 GVICYTIS 148


>sp|TBP_PYRWO|TATA-BOX-BINDING protein|Pyrococcus woesei

Query: 1 GVICH 5
G+ICH
Sbjct: 45 GIICH 49


>sp|TBP_PYRFU|TATA-BOX-BINDING protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVICH 5
G+ICH
Sbjct: 45 GIICH 49


>sp|HIS3_ARCFU|PHOSPHORIBOSYL-AMP cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVICHTGS 8
G CHTG+
Sbjct: 86 GNACHTGN 93


>sp|HIS3_NITMS|PHOSPHORIBOSYL-AMP cyclohydrolase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GVICHTG 7
G CHTG
Sbjct: 92 GPACHTG 98


>sp|HIS3_CENSY|PHOSPHORIBOSYL-AMP cyclohydrolase|Cenarchaeum symbiosum (strain A)

Query: 1 GVICHTG 7
G CHTG
Sbjct: 92 GPACHTG 98


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 GVICHTGS 8
G CH+GS
Sbjct: 1065 GSACHSGS 1072




24|SequenceR|125|116|FGITSGVICH

>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGITSGVI 8
FGI SGVI
Sbjct: 338 FGIKSGVI 345


>sp|FTR_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 FGITSGV 7
FGIT+GV
Sbjct: 158 FGITTGV 164


>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FGITSGVIC 9
FGI SG+ C
Sbjct: 56 FGIRSGMPC 64


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FGITSGVIC 9
FGI SG+ C
Sbjct: 56 FGIRSGMPC 64


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FGITSGVICH 10
FGI V CH
Sbjct: 181 FGIPVNVHCH 190


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FGITSGVICH 10
FGI V CH
Sbjct: 181 FGIPVNVHCH 190


>sp|IF6_HALS3|TRANSLATION initiation factor 6|Halobacterium salinarum (strain ATCC 29341

Query: 4 TSGVICH 10
T GV+CH
Sbjct: 150 TDGVLCH 156


>sp|SRP54_METTH|SIGNAL recognition particle 54 kDa|Methanothermobacter thermautotrophicus

Query: 2 GITSGVIC 9
G T GV+C
Sbjct: 127 GFTVGVVC 134


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 SGVICH 10
+GV+CH
Sbjct: 152 TGVLCH 157


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 FGITSGVICH 10
FG+T CH
Sbjct: 93 FGMTDDPACH 102


>sp|CDPAS_METM6|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C6 /

Query: 1 FGITSGVICH 10
FGI +G++ H
Sbjct: 61 FGIITGILQH 70


>sp|CDPAS_METM5|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C5 /

Query: 1 FGITSGVICH 10
FGI +G++ H
Sbjct: 61 FGIITGILQH 70


>sp|CDPAS_METM7|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C7 /

Query: 1 FGITSGVICH 10
FGI +G++ H
Sbjct: 61 FGIITGILQH 70


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GITSGVICH 10
G+T V CH
Sbjct: 196 GVTISVHCH 204




25|SequenceR|130|121|IAVLSFGITS

>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IAVLSFGIT 9
IA++ FGIT
Sbjct: 175 IAIIVFGIT 183


>sp|TRUB_HALSA|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain

Query: 2 AVLSFGITS 10
AVLSFG+ +
Sbjct: 14 AVLSFGVVN 22


>sp|TRUB_HALS3|PROBABLE tRNA pseudouridine synthase B|Halobacterium salinarum (strain

Query: 2 AVLSFGITS 10
AVLSFG+ +
Sbjct: 14 AVLSFGVVN 22


>sp|BACH_NATPH|HALORHODOPSIN pharaonis (Natronobacterium pharaonis)

Query: 1 IAVLSFGITS 10
IAVL G+TS
Sbjct: 236 IAVLPVGVTS 245


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 IAVLSFGI 8
I VLSFG+
Sbjct: 333 IGVLSFGV 340




26|SequenceR|135|126|VGKTGIAVLS

>sp|SPEH_METM6|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C6 /

Query: 2 GKTGIAVLS 10
G TG+AVLS
Sbjct: 53 GVTGVAVLS 61


>sp|SPEH_METM5|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C5 /

Query: 2 GKTGIAVLS 10
G TG+AVLS
Sbjct: 53 GVTGVAVLS 61


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 VGKTGIAVLS 10
VGKT I +LS
Sbjct: 24 VGKTNICILS 33


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GKTGIAV 8
GKTG+AV
Sbjct: 293 GKTGVAV 299


>sp|SPEH_METM7|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain C7 /

Query: 2 GKTGIAVLS 10
G TG+AVLS
Sbjct: 53 GVTGVAVLS 61


>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GKTGIAV 8
GKTG+AV
Sbjct: 293 GKTGVAV 299


>sp|RADB_METM7|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 VGKTGIAVLS 10
VGKT I +LS
Sbjct: 24 VGKTNICILS 33


>sp|SPEH_METMP|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus maripaludis (strain DSM

Query: 2 GKTGIAVLS 10
G TG+AVLS
Sbjct: 53 GVTGVAVLS 61


>sp|Y675_METJA|UNCHARACTERIZED protein MJ0675|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VGKTGIAVLS 10
+GK GIA LS
Sbjct: 266 LGKEGIAYLS 275


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 2 GKTGIAV 8
GKTG+AV
Sbjct: 291 GKTGLAV 297


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 2 GKTGIAVL 9
GKTG+A L
Sbjct: 234 GKTGLAAL 241


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 1 VGKTGIAVL 9
+GKT IA+L
Sbjct: 39 LGKTAIAIL 47


>sp|SPEH_METJA|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanocaldococcus jannaschii (strain

Query: 2 GKTGIAVLS 10
G TG+AVL+
Sbjct: 54 GATGVAVLA 62


>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 2 GKTGIAVLS 10
G TG+AVL+
Sbjct: 53 GVTGVAVLA 61


>sp|HACA_METMA|PROBABLE methanogen homoaconitase large subunit|Methanosarcina mazei (strain

Query: 1 VGKTGIA 7
+GKTGIA
Sbjct: 158 IGKTGIA 164


>sp|HCGF_METTH|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanothermobacter

Query: 1 VGKTGIAVLS 10
+G+ GIAV+S
Sbjct: 105 IGRGGIAVVS 114


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 1 VGKTGIA 7
+GKTGIA
Sbjct: 191 IGKTGIA 197


>sp|GUAAB_THEVO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma volcanium

Query: 1 VGKTGIAVLS 10
+GKT I VLS
Sbjct: 102 IGKTFIDVLS 111


>sp|SPEH_METVS|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus vannielii (strain ATCC

Query: 2 GKTGIAVLS 10
G TG+AVL+
Sbjct: 53 GVTGVAVLA 61




27|SequenceR|140|131|LEMWQVGKTG

>sp|THIE_PYRFU|THIAMINE-PHOSPHATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EMWQVGKT 9
EM+++GKT
Sbjct: 46 EMYEIGKT 53


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LEMWQVGK 8
LE WQ+G+
Sbjct: 332 LEWWQIGE 339


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LEMWQVGKTG 10
L+ W+ G+TG
Sbjct: 321 LQAWKDGETG 330


>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WQVGKTG 10
W+V KTG
Sbjct: 317 WRVSKTG 323


>sp|KCY_METPE|CYTIDYLATE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 EMWQVGKTG 10
E W VG+ G
Sbjct: 156 ERWSVGQLG 164


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 LEMWQVGK 8
L++W +GK
Sbjct: 58 LDLWMMGK 65


>sp|DHYS1_ARCFU|PROBABLE deoxyhypusine synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MWQVGK 8
+W+VGK
Sbjct: 150 LWEVGK 155


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 1 LEMWQVGKTG 10
L +W+VG G
Sbjct: 219 LVLWEVGYEG 228


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 4 WQVGKTG 10
W+VGK G
Sbjct: 13 WKVGKKG 19




28|SequenceR|145|136|AVIKVLEMWQ

>sp|HPRT_METAR|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 AVIKVLEM 8
AVIK LEM
Sbjct: 132 AVIKALEM 139


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 AVIKVLEM 8
A +KVLEM
Sbjct: 150 AAVKVLEM 157


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VIKVLEMWQ 10
VIKV E W
Sbjct: 360 VIKVYEAWH 368


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 VIKVLEMWQ 10
+IK+++ WQ
Sbjct: 17 LIKIMDKWQ 25




29|SequenceR|150|141|SIFWSAVIKV

>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 4 WSAVIKV 10
WSAV+KV
Sbjct: 180 WSAVVKV 186


>sp|Y1575_ARCFU|UNCHARACTERIZED protein AF_1575|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SIFWSAVIK 9
S FWSAV+K
Sbjct: 45 SDFWSAVVK 53


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FWSAVIKV 10
+WS V+KV
Sbjct: 123 YWSLVVKV 130


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SIFWSAVI 8
+IFW A+I
Sbjct: 332 TIFWPALI 339


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SIFWSAVI 8
S+FW+ V+
Sbjct: 290 SVFWNMVV 297


>sp|SYY_SACS2|TYROSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 128 YWALVIKV 135


>sp|SYY_SACI7|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 123 YWALVIKV 130


>sp|SYY_SACI6|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 123 YWALVIKV 130


>sp|SYY_SACI4|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 123 YWALVIKV 130


>sp|SYY_SACI3|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 123 YWALVIKV 130


>sp|SYY_SACI2|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 123 YWALVIKV 130


>sp|SYY_SACI1|TYROSINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 FWSAVIKV 10
+W+ VIKV
Sbjct: 123 YWALVIKV 130


>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 2 IFWSAVIK 9
IFW +IK
Sbjct: 65 IFWEDIIK 72


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SIFWSAVIKV 10
S +WS ++KV
Sbjct: 116 SDYWSLLLKV 125




30|SequenceR|155|146|GSLLPSIFWS

>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GSLLPSIFW 9
G LLP I+W
Sbjct: 264 GRLLPCIYW 272


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SLLPSIFWS 10
+L+P++FW+
Sbjct: 349 NLIPNVFWA 357


>sp|APGM_PYRIL|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 LPSIFW 9
+PS+FW
Sbjct: 1 MPSVFW 6


>sp|ASRAC_PYRHO|ALANINE/SERINE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LLPSIFW 9
L+P++FW
Sbjct: 190 LMPNVFW 196


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSLLPSIFWS 10
G +LP+IF++
Sbjct: 149 GQVLPTIFFA 158


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSLLPSIFW 9
G LLP I W
Sbjct: 288 GGLLPLIAW 296


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 GSLLPSIFW 9
GS+ P +W
Sbjct: 252 GSVTPDTYW 260


>sp|MCAL_HALMA|L-MALYL-COA/BETA-METHYLMALYL-COA lyase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GSLLPSIFWS 10
G +LP + W+
Sbjct: 72 GDILPRVEWA 81


>sp|TRUA_METTP|TRNA pseudouridine synthase A|Methanothrix thermoacetophila (strain

Query: 2 SLLPSIFWS 10
SLLPS W+
Sbjct: 80 SLLPSDVWA 88




31|SequenceR|160|151|LGSMFGSLLP

>sp|PANE_THEKO|2-DEHYDROPANTOATE 2-reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGSMFGSLL 9
+GS+FG+LL
Sbjct: 11 IGSLFGALL 19


>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGSMFGSLL 9
+GS+FG LL
Sbjct: 11 IGSLFGGLL 19


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LGSMFGSLL 9
LG+M GS+L
Sbjct: 19 LGNMIGSVL 27


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LGSMFGSLL 9
LG+M GS+L
Sbjct: 19 LGNMIGSVL 27


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LGSMFGSLL 9
LG+M GS+L
Sbjct: 19 LGNMIGSVL 27


>sp|CAS1A_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LGSMFGSLLP 10
LG+ FG LP
Sbjct: 74 LGNPFGHFLP 83


>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGSMFGSLL 9
LGS+FG+++
Sbjct: 9 LGSVFGAVI 17


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LGSMFGSLL 9
LG++ GSLL
Sbjct: 32 LGNLIGSLL 40


>sp|FLAB3_METJA|FLAGELLIN B3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGSMFGSLLP 10
+G +FG ++P
Sbjct: 173 VGDVFGGIMP 182


>sp|CDPAS_METVS|CDP-ARCHAEOL synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LGSMFGSLLP 10
G MFGS L
Sbjct: 103 FGDMFGSFLK 112




32|SequenceR|165|156|ILVFLLGSMF

>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 ILVFLLGSMF 10
+LVFL+G F
Sbjct: 12 LLVFLMGGSF 21


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILVFLLGSMF 10
I+VFLLG +F
Sbjct: 200 IMVFLLGVLF 209


>sp|HMEE_ARCFU|HDR-LIKE menaquinol oxidoreductase cytochrome c|Archaeoglobus fulgidus

Query: 1 ILVFLLG 7
ILVFL+G
Sbjct: 11 ILVFLIG 17


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ILVFLLGSM 9
++ FLLGS+
Sbjct: 45 VIYFLLGSL 53




33|SequenceR|170|161|LIFIRILVFL

>sp|NAH2_METJA|PROBABLE Na(+)/H(+) antiporter 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IFIRILVFL 10
IFIRIL+F+
Sbjct: 283 IFIRILIFV 291


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 3 FIRILVF 9
FIR+LVF
Sbjct: 609 FIRVLVF 615




34|SequenceR|175|166|PDEKKLIFIR

>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 PDEKKLIFIR 10
PDEK L ++R
Sbjct: 229 PDEKTLNYVR 238


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PDEKKLIF 8
PDE+KLI
Sbjct: 485 PDEEKLIL 492


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 1 PDEKKLIFI 9
PDEK+L ++
Sbjct: 21 PDEKRLYWV 29


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 PDEKKLIF 8
PDE+KLI
Sbjct: 485 PDEEKLIL 492


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PDEKKLI 7
PDE+KL+
Sbjct: 188 PDEEKLV 194


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PDEKKLI 7
PDE+K+I
Sbjct: 425 PDEEKII 431


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PDEKKLI 7
PDEKKL+
Sbjct: 312 PDEKKLL 318


>sp|FEN_PYRIL|FLAP endonuclease 1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PDEKKLI 7
PDE+KLI
Sbjct: 303 PDEQKLI 309


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 PDEKKLIF 8
PD KK++F
Sbjct: 371 PDRKKVLF 378


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PDEKKLIFI 9
PD+KK+I +
Sbjct: 372 PDDKKIIVM 380




35|SequenceR|180|171|LGNPVPDEKK

>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GNPVPDEK 9
G+P+PDEK
Sbjct: 97 GHPIPDEK 104


>sp|GCH31_HALSA|GTP cyclohydrolase III 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 LGNPVPDEKK 10
LG P+PD ++
Sbjct: 123 LGQPIPDAER 132


>sp|DAPF_METAR|DIAMINOPIMELATE epimerase|Methanocella arvoryzae (strain DSM 22066

Query: 3 NPVPDEKK 10
NPVP+EKK
Sbjct: 24 NPVPEEKK 31


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GNPVPD 7
GNPVPD
Sbjct: 218 GNPVPD 223


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 2 GNPVPDEKK 10
G PVP EK+
Sbjct: 19 GTPVPGEKE 27


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 4 PVPDEKK 10
P PDEKK
Sbjct: 367 PCPDEKK 373


>sp|CSG_HALMA|CELL surface glycoprotein|Haloarcula marismortui (strain ATCC 43049

Query: 1 LGNPVPDEK 9
LGNP+P ++
Sbjct: 102 LGNPIPQDQ 110


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GNPVPDEK 9
G P+P+EK
Sbjct: 87 GEPIPEEK 94


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 3 NPVPD 7
NPVPD
Sbjct: 127 NPVPD 131


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 1 LGNPVPDEK 9
+G PVP EK
Sbjct: 205 VGEPVPQEK 213


>sp|RS13_CENSY|SMALL ribosomal subunit protein uS13|Cenarchaeum symbiosum (strain A)

Query: 1 LGNPVPDEKK 10
LGN +P EKK
Sbjct: 58 LGNDLPGEKK 67


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LGNPVPD 7
+GN VPD
Sbjct: 277 MGNEVPD 283


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GNPVPDEKK 10
G P P+E K
Sbjct: 442 GGPAPEEMK 450


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LGNPVPDEK 9
LG P PDEK
Sbjct: 271 LGLPKPDEK 279


>sp|RS4E_PYRIL|SMALL ribosomal subunit protein eS4|Pyrobaculum islandicum (strain DSM

Query: 5 VPDEKK 10
VPDEKK
Sbjct: 98 VPDEKK 103


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGNPVPDEKK 10
LGN + DEK+
Sbjct: 47 LGNTIYDEKR 56


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 4 PVPDEK 9
PVPDEK
Sbjct: 619 PVPDEK 624


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LGNPVPDEKK 10
LG+ VP EKK
Sbjct: 532 LGDKVPAEKK 541


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 LGNPVPDEKK 10
LG P+P +KK
Sbjct: 502 LGTPLPWDKK 511


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGNPVPDEKK 10
LG P+P +KK
Sbjct: 494 LGTPLPWDKK 503


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LGNPVPDEKK 10
LG P+P +KK
Sbjct: 492 LGTPLPWDKK 501


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LGNPVPDEKK 10
LG P+P +KK
Sbjct: 490 LGTPLPWDKK 499


>sp|ACDB2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 2 GNPVPDEK 9
G PVP+EK
Sbjct: 33 GLPVPEEK 40


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LGNPVPD 7
LGNP P+
Sbjct: 257 LGNPSPE 263


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LGNPVPDEK 9
LG P P+EK
Sbjct: 447 LGIPYPEEK 455


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LGNPVPDEK 9
LG P P+EK
Sbjct: 446 LGIPYPEEK 454


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 LGNPVPDEK 9
LG P P+EK
Sbjct: 446 LGIPYPEEK 454


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 3 NPVPD 7
NPVPD
Sbjct: 314 NPVPD 318


>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 GNPVPDEKK 10
G P+PD K
Sbjct: 78 GEPIPDTAK 86


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 PVPDEKK 10
P+P++KK
Sbjct: 824 PIPEDKK 830


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 PVPDEKK 10
P+PD KK
Sbjct: 369 PLPDRKK 375


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 LGNPVPDEK 9
G PVP++K
Sbjct: 328 FGKPVPEDK 336


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LGNPVPDEK 9
+G P+P+EK
Sbjct: 205 VGEPLPEEK 213


>sp|RISC_METTM|RIBOFLAVIN synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 LGNPVPDEK 9
LG P P+EK
Sbjct: 63 LGMPGPEEK 71


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LGNPVPDE 8
LG P P+E
Sbjct: 454 LGTPYPEE 461


>sp|RISC_METTH|RIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LGNPVPDEK 9
LG P P+EK
Sbjct: 63 LGMPGPEEK 71




36|SequenceR|185|176|VPLARLGNPV

>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 VPLARLGNPV 10
+PL R+G PV
Sbjct: 408 IPLVRMGFPV 417


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 VPLARLGNPV 10
+PL R+G PV
Sbjct: 408 IPLVRVGYPV 417


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 VPLARLGNPV 10
+PL R+G PV
Sbjct: 411 IPLYRVGYPV 420


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 VPLARLGNPV 10
+PL R+G PV
Sbjct: 411 IPLYRVGYPV 420


>sp|RS4_METTP|SMALL ribosomal subunit protein uS4|Methanothrix thermoacetophila (strain

Query: 2 PLARLGNP 9
PLAR G+P
Sbjct: 162 PLAREGHP 169


>sp|DEOC_PYRAR|DEOXYRIBOSE-PHOSPHATE aldolase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 ARLGNPV 10
+RLGNPV
Sbjct: 158 SRLGNPV 164


>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 VPLARLGNPV 10
VPL R+G P+
Sbjct: 402 VPLVRVGFPI 411


>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VPLARLG 7
VPLAR+G
Sbjct: 67 VPLARVG 73


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPLARLGNP 9
+PL LG P
Sbjct: 917 IPLEELGRP 925


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPLARLGNP 9
+PL LG P
Sbjct: 890 IPLEELGRP 898


>sp|THRC_METJA|THREONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RLGNPV 10
R+GNPV
Sbjct: 296 RIGNPV 301


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 2 PLARLGNP 9
PLA +G P
Sbjct: 56 PLAEMGEP 63


>sp|Y484_METBF|UPF0292 protein Mbar_A0484|Methanosarcina barkeri (strain Fusaro /

Query: 3 LARLGNPV 10
+ARLGN V
Sbjct: 66 IARLGNEV 73


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PLARLGNPV 10
PLA + NP+
Sbjct: 575 PLASMKNPI 583


>sp|NTPTH_PYRNV|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VPLARLG 7
VPLAR+G
Sbjct: 66 VPLARVG 72


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 RLGNPV 10
R+GNPV
Sbjct: 294 RIGNPV 299




37|SequenceR|190|181|TAAYFVPLAR

***** No hits found ******


38|SequenceR|195|186|VNIAITAAYF

>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei

Query: 1 VNIAITAAY 9
+N+A TAA+
Sbjct: 43 INVAATAAF 51


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 VNIAITAAY 9
+N+A TAA+
Sbjct: 43 INVAATAAF 51


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 1 VNIAITAAY 9
+N+A TAA+
Sbjct: 43 INVAATAAF 51


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain

Query: 2 NIAITAAY 9
NIA+ AAY
Sbjct: 33 NIAVFAAY 40




39|SequenceR|200|191|YMISFVNIAI

>sp|RS2_METS3|SMALL ribosomal subunit protein uS2|Methanobrevibacter smithii (strain

Query: 2 MISFVNIAI 10
++SFV+IAI
Sbjct: 145 LLSFVDIAI 153




40|SequenceR|205|196|VPAGTYMISF

>sp|SERA_ARCFU|D-3-PHOSPHOGLYCERATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPAGTYMISF 10
VP G Y+IS
Sbjct: 448 VPKGHYIISL 457


>sp|PURQ_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VPAGTYMISF 10
VPAG Y +F
Sbjct: 147 VPAGEYKAAF 156


>sp|BIOY_PYRHO|PROBABLE biotin transporter BioY|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PAGTYMISF 10
P G Y+I+F
Sbjct: 81 PTGGYIIAF 89




41|SequenceR|210|201|LVLGLVPAGT

>sp|DAPA_METKA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 VLGLVPAGT 10
V G+VPAGT
Sbjct: 40 VHGVVPAGT 48


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VLGLVPAGT 10
V GLVP GT
Sbjct: 40 VDGLVPVGT 48


>sp|TDXH_PYRFU|PEROXIREDOXIN furiosus (strain ATCC 43587

Query: 3 LGLVPAGT 10
LG++P+G+
Sbjct: 109 LGMIPSGS 116


>sp|ILVC_PYRAB|KETOL-ACID reductoisomerase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 LVLGLVPAGT 10
++LGL P+G+
Sbjct: 46 VILGLRPSGS 55


>sp|COBY_METJA|ADENOSYLCOBINAMIDE-PHOSPHATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GLVPAG 9
GLVPAG
Sbjct: 148 GLVPAG 153


>sp|RL2_PYRIL|LARGE ribosomal subunit protein uL2|Pyrobaculum islandicum (strain DSM

Query: 1 LVLGLVPAGT 10
++LG VP GT
Sbjct: 94 VILGRVPEGT 103


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 LVLGLVPAGT 10
LV+G PAG+
Sbjct: 8 LVIGAGPAGS 17


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LVLGLVPAGT 10
LV+G PAG+
Sbjct: 8 LVIGAGPAGS 17


>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VLGLVPAGT 10
V LVPAGT
Sbjct: 35 VNALVPAGT 43


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LVLGLVPAGT 10
LV+G PAG+
Sbjct: 8 LVIGAGPAGS 17


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVLGLVPAGT 10
LV+G PAG+
Sbjct: 8 LVIGAGPAGS 17


>sp|DAPA_METBF|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VLGLVPAGT 10
V G+VP GT
Sbjct: 36 VAGIVPCGT 44




42|SequenceR|215|206|IAWMPLVLGL

>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 3 WMPLVLGL 10
W+P LGL
Sbjct: 149 WLPFALGL 156


>sp|RNP4_SULAC|RIBONUCLEASE P protein component 4|Sulfolobus acidocaldarius (strain ATCC

Query: 3 WMPLVLGL 10
++PLV+GL
Sbjct: 63 YVPLVIGL 70


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 IAWMPLV 7
+AW+PL+
Sbjct: 137 LAWVPLL 143


>sp|SYP_NANEQ|PROLINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 AWMPLVL 8
AW P+V+
Sbjct: 61 AWFPIVI 67


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 2 AWMPLVLGL 10
AW P +GL
Sbjct: 173 AWFPNAVGL 181


>sp|TYSY_METTH|PUTATIVE thymidylate synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 AWMPLVLGL 10
AW P +GL
Sbjct: 173 AWFPNAVGL 181


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 3 WMPLVLGL 10
W P +LG+
Sbjct: 643 WSPAILGI 650


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 WMPLVLGL 10
W P +LG+
Sbjct: 643 WSPAILGI 650


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IAWMPLV 7
+AW+PL+
Sbjct: 172 VAWVPLL 178


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WMPLVLGL 10
W+P VLG+
Sbjct: 150 WVPAVLGM 157


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AWMPLVLG 9
AWM +LG
Sbjct: 104 AWMHAILG 111


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 IAWMPLVLGL 10
I + PL+LG+
Sbjct: 340 IVYAPLILGM 349




43|SequenceR|220|211|FSILAIAWMP

>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 SILAIAWM 9
S+L +AWM
Sbjct: 543 SVLGLAWM 550




44|SequenceR|225|216|LLAVGFSILA

>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 LLAVGFSIL 9
LLAVG+++L
Sbjct: 191 LLAVGYALL 199


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLAVGFSIL 9
L A+GFS+L
Sbjct: 184 LYAIGFSML 192


>sp|Y097_ARCFU|UNCHARACTERIZED protein AF_0097|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLAVGFSI 8
LLA+GF+I
Sbjct: 20 LLAIGFAI 27




45|SequenceR|230|221|VFFAFLLAVG

***** No hits found ******


46|SequenceR|235|226|CVFLWVFFAF

>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 1 CVFLWVFFA 9
CVF +++FA
Sbjct: 239 CVFEYIYFA 247


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 1 CVFLWVFFA 9
CVF +++FA
Sbjct: 239 CVFEYIYFA 247


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 1 CVFLWVFFA 9
C+F +++FA
Sbjct: 239 CIFEYIYFA 247


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 1 CVFLWVFFA 9
C+F +V+FA
Sbjct: 250 CMFEYVYFA 258


>sp|PUR1_METJA|AMIDOPHOSPHORIBOSYLTRANSFERASE jannaschii (strain ATCC 43067

Query: 1 CVFLWVFFA 9
C+F +V+FA
Sbjct: 255 CMFEYVYFA 263


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CVFLWVFFA 9
C+ L+VF A
Sbjct: 16 CILLFVFMA 24


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FLWVFFAF 10
FLW+ F F
Sbjct: 293 FLWMLFKF 300


>sp|AMT1_ARCFU|AMMONIUM transporter Amt1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CVFLWVFFAF 10
V LW+F+ +
Sbjct: 50 TVLLWIFYGY 59


>sp|CDPAS_METPE|CDP-ARCHAEOL synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 CVFLWV 6
CVF+W+
Sbjct: 63 CVFVWL 68




47|SequenceR|240|231|RRMWPCVFLW

>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 RRMWPCV 7
RRM+PCV
Sbjct: 106 RRMFPCV 112


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 RRMWPCV 7
RRM+PC+
Sbjct: 107 RRMFPCI 113


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 3 MWPCVFL 9
++PC+FL
Sbjct: 9 LFPCIFL 15


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 5 PCVFLW 10
PC LW
Sbjct: 549 PCAILW 554


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MWPCVF 8
MW CV+
Sbjct: 270 MWGCVY 275




48|SequenceR|245|236|KGTIKRRMWP

>sp|RL6_METAC|LARGE ribosomal subunit protein uL6|Methanosarcina acetivorans (strain

Query: 1 KGTIKRRMW 9
KGT++R++W
Sbjct: 30 KGTVERKLW 38


>sp|DAPF_METMP|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KGTIKRRMW 9
K T+K R+W
Sbjct: 202 KNTVKMRVW 210


>sp|IF1A_THEKO|TRANSLATION initiation factor 1A|Thermococcus kodakarensis (strain ATCC

Query: 2 GTIKRRMW 9
G +KRRMW
Sbjct: 58 GKLKRRMW 65


>sp|RL6_METHJ|LARGE ribosomal subunit protein uL6|Methanospirillum hungatei JF-1

Query: 1 KGTIKRRMW 9
KG ++R MW
Sbjct: 28 KGNLQRDMW 36


>sp|RL6_METBF|LARGE ribosomal subunit protein uL6|Methanosarcina barkeri (strain

Query: 2 GTIKRRMW 9
GT++R++W
Sbjct: 32 GTVERKLW 39


>sp|IF1A_METLZ|TRANSLATION initiation factor 1A|Methanocorpusculum labreanum (strain ATCC

Query: 1 KGTIKRRMW 9
KG IK+R+W
Sbjct: 58 KGKIKKRVW 66


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 IKRRMWP 10
+KRR WP
Sbjct: 106 LKRRGWP 112


>sp|HMVA_METVO|DNA-BINDING protein HmvA|Methanococcus voltae

Query: 1 KGTIKRRM 8
KGT+KR M
Sbjct: 4 KGTVKRIM 11


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 1 KGTIKRRMW 9
KGT+ R+W
Sbjct: 220 KGTLYERLW 228


>sp|DAPF_METM7|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C7 /

Query: 3 TIKRRMW 9
TIK R+W
Sbjct: 204 TIKMRVW 210


>sp|IF1A_PICTO|TRANSLATION initiation factor 1A|Picrophilus torridus (strain ATCC 700027

Query: 2 GTIKRRMW 9
G +K+RMW
Sbjct: 51 GKMKKRMW 58


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TIKRRMW 9
T+KRR W
Sbjct: 482 TVKRRPW 488


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GTIKRRMW 9
G+ KR++W
Sbjct: 62 GSYKRKIW 69




49|SequenceR|250|241|GEKQLKGTIK

>sp|MFNA_METMA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina mazei (strain

Query: 1 GEKQLKGT 8
G+K+ KGT
Sbjct: 119 GKKEFKGT 126




50|SequenceR|255|246|VRSLAGEKQL

>sp|CARB_THEVO|CARBAMOYL phosphate synthase large chain|Thermoplasma volcanium (strain ATCC

Query: 2 RSLAGEKQL 10
RSLAG K+L
Sbjct: 208 RSLAGLKEL 216


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VRSLAGEKQL 10
++ LAGEK+L
Sbjct: 140 MKKLAGEKEL 149


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 VRSLAGEKQ 9
++S+AGEK+
Sbjct: 29 IKSIAGEKE 37


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 VRSLAGEKQ 9
++S+AGEK+
Sbjct: 29 IKSIAGEKE 37


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 VRSLAGEKQ 9
++S+AGEK+
Sbjct: 29 IKSIAGEKE 37


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 VRSLAGEKQ 9
++S+AGEK+
Sbjct: 29 IKSIAGEKE 37


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 1 VRSLAGEKQ 9
++S+AGEK+
Sbjct: 29 IKSIAGEKE 37


>sp|F16PA_METLZ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VRSLAGEKQ 9
VRS+A E+Q
Sbjct: 99 VRSIASEEQ 107




51|SequenceR|260|251|LSEDSVRSLA

>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LSEDSVRSL 9
LSED +RS+
Sbjct: 98 LSEDQIRSI 106


>sp|TRPD_SULTO|ANTHRANILATE phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 1 LSEDSVRSLA 10
L+ED RS+A
Sbjct: 16 LTEDEARSIA 25


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SEDSVRSL 9
SED +RSL
Sbjct: 178 SEDRIRSL 185


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LSEDSVRSLA 10
+S+DSVR++
Sbjct: 129 MSDDSVRTIV 138




52|SequenceR|265|256|EQVKSLSEDS

>sp|HTR9_HALSA|HALOBACTERIAL transducer protein 9|Halobacterium salinarum (strain ATCC 700922

Query: 1 EQVKSLSEDS 10
E+VK+L+ED+
Sbjct: 350 EEVKALAEDA 359


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 3 VKSLSEDS 10
VKSL EDS
Sbjct: 740 VKSLVEDS 747




53|SequenceR|270|261|VPSEAEQVKS

>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSEAEQVKS 10
PS AE++K+
Sbjct: 183 PSHAEEIKN 191


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain

Query: 1 VPSEAEQV 8
+PSEAE++
Sbjct: 7 LPSEAERI 14


>sp|Y1282_METJA|UPF0252 protein MJ1282|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSEAEQVKS 10
P E E+VKS
Sbjct: 169 PKEIEKVKS 177




54|SequenceR|275|266|PLEKFVPSEA

>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PLEKFVPS 8
P+E FVPS
Sbjct: 356 PVESFVPS 363


>sp|SUCC_METTH|SUCCINATE--COA ligase [ADP-forming] subunit beta|Methanothermobacter

Query: 1 PLEKFVPSEA 10
PL++F+P EA
Sbjct: 142 PLDEFLPYEA 151


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EKFVPSE 9
EK+VPSE
Sbjct: 102 EKYVPSE 108


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 LEKFVPSEA 10
LEKF P EA
Sbjct: 73 LEKFSPREA 81


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLEKFVPSE 9
P+EK +P E
Sbjct: 198 PIEKLLPKE 206


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 PLEKFVPSEA 10
PL+K+V EA
Sbjct: 408 PLQKYVGKEA 417


>sp|Y1542_METJA|UNCHARACTERIZED protein MJ1542|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLEKFVPS 8
P EK++PS
Sbjct: 408 PSEKWIPS 415


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LEKFVPSEA 10
LE+FV SEA
Sbjct: 251 LEQFVLSEA 259


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 2 LEKFVPSEA 10
LE+F P+EA
Sbjct: 174 LERFDPAEA 182


>sp|PIMT_PYRAR|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LEKFVPSEA 10
LEKF P +A
Sbjct: 137 LEKFAPYDA 145


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LEKFVPSE 9
LEKF+P E
Sbjct: 27 LEKFMPKE 34


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PLEKFVPSEA 10
P F+PSEA
Sbjct: 83 PYVNFLPSEA 92




55|SequenceR|280|271|NAKAGPLEKF

>sp|MCT_HALHT|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula hispanica (strain ATCC 33960

Query: 1 NAKAGPLEKF 10
N KAG +EKF
Sbjct: 98 NFKAGTMEKF 107


>sp|MCT_HALMA|SUCCINYL-COA:MESACONATE CoA-transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NAKAGPLEKF 10
N KAG +EKF
Sbjct: 98 NFKAGTMEKF 107


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 4 AGPLEKF 10
AGPLE F
Sbjct: 202 AGPLESF 208


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 3 KAGPLEK 9
KAGPL K
Sbjct: 569 KAGPLSK 575


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 KAGPLEK 9
KAGPL K
Sbjct: 569 KAGPLSK 575




56|SequenceR|285|276|ITSDDNAKAG

>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 1 ITSDDNAKA 9
+TS+D AKA
Sbjct: 171 LTSEDAAKA 179


>sp|DN7A_ACIHW|DNA-BINDING protein 7a|Acidianus hospitalis (strain W1)

Query: 1 ITSDDNAKAG 10
T DDN K G
Sbjct: 32 FTYDDNGKTG 41


>sp|DN7B_ACIHW|DNA-BINDING protein 7b|Acidianus hospitalis (strain W1)

Query: 1 ITSDDNAKAG 10
T DDN K G
Sbjct: 33 FTYDDNGKTG 42


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 ITSDDNAKAG 10
IT D N K G
Sbjct: 305 ITKDTNGKMG 314


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 ITSDDNAKAG 10
IT D N K G
Sbjct: 305 ITKDTNGKMG 314


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 ITSDDNAKAG 10
IT D N K G
Sbjct: 305 ITKDTNGKMG 314


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 ITSDDNAKAG 10
IT D N K G
Sbjct: 305 ITKDTNGKMG 314


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 ITSDDNAKAG 10
IT D N K G
Sbjct: 305 ITKDTNGKMG 314


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 ITSDDNAKAG 10
IT D N K G
Sbjct: 305 ITKDTNGKMG 314


>sp|DN7_METCR|DNA-BINDING protein 7|Metallosphaera cuprina (strain Ar-4)

Query: 1 ITSDDNAKAG 10
T DDN K G
Sbjct: 33 FTYDDNGKTG 42


>sp|DN7_METS5|DNA-BINDING protein 7|Metallosphaera sedula (strain ATCC 51363

Query: 1 ITSDDNAKAG 10
T DDN K G
Sbjct: 33 FTYDDNGKTG 42


>sp|PYRH_METST|URIDYLATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ITSDDNAKAG 10
I SD++ KAG
Sbjct: 169 IVSDNDTKAG 178




57|SequenceR|290|281|AGTLPITSDD

>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 2 GTLPITSDD 10
G LP+TSDD
Sbjct: 353 GLLPLTSDD 361


>sp|THIM_HALWD|HYDROXYETHYLTHIAZOLE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GTLPITSDD 10
G LP+ SDD
Sbjct: 50 GGLPVMSDD 58


>sp|THIM_NATPD|HYDROXYETHYLTHIAZOLE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GTLPITSDD 10
G LP+ SDD
Sbjct: 44 GGLPVMSDD 52


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LPITSDD 10
LP+TS+D
Sbjct: 402 LPLTSED 408


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GTLPITSD 9
GT P+T D
Sbjct: 25 GTTPLTDD 32


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AGTLPIT 7
+GTLP+T
Sbjct: 279 SGTLPVT 285


>sp|GFCR_HALMA|TRANSCRIPTIONAL regulator GfcR|Haloarcula marismortui (strain ATCC 43049

Query: 2 GTLPITSDD 10
GT P TSDD
Sbjct: 45 GTEPDTSDD 53


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 4 LPITSDD 10
LP+ SDD
Sbjct: 403 LPVVSDD 409




58|SequenceR|295|286|LTEGAAGTLP

>sp|DNAG_METS5|DNA primase DnaG|Metallosphaera sedula (strain ATCC 51363

Query: 3 EGAAGTLP 10
EGA+G +P
Sbjct: 194 EGASGKIP 201


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTEGAAGTL 9
L++GAAGT+
Sbjct: 229 LSDGAAGTV 237


>sp|PAN_PYRFU|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LTEGAAG 7
LTEGA+G
Sbjct: 337 LTEGASG 343


>sp|DNLI_METAR|DNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 TEGAAG 7
TEGAAG
Sbjct: 207 TEGAAG 212




59|SequenceR|300|291|GESTGLTEGA

***** No hits found ******


60|SequenceR|305|296|SGASTGESTG

>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 1 SGASTGE 7
SGASTGE
Sbjct: 39 SGASTGE 45


>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 1 SGASTGE 7
SGASTGE
Sbjct: 39 SGASTGE 45


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 1 SGASTGE 7
SGASTGE
Sbjct: 39 SGASTGE 45


>sp|GCH3_PYRAE|GTP cyclohydrolase III|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GASTGESTG 10
GA+ GES G
Sbjct: 102 GATPGESAG 110


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 1 SGASTGE 7
SGASTGE
Sbjct: 39 SGASTGE 45


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 1 SGASTGE 7
SGASTGE
Sbjct: 39 SGASTGE 45


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 SGASTGE 7
SGASTGE
Sbjct: 39 SGASTGE 45




61|SequenceR|310|301|AARPHSGAST

>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PHSGAST 10
PH GAST
Sbjct: 277 PHQGAST 283


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain

Query: 1 AARPHSGAS 9
A RP +GAS
Sbjct: 46 APRPEAGAS 54


>sp|SERA_METTH|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PHSGAST 10
PH GAST
Sbjct: 278 PHIGAST 284


>sp|GCS2_HALMA|GLUTAMATE--CYSTEINE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ARPHSGAST 10
RPHSG T
Sbjct: 229 VRPHSGHGT 237


>sp|GCS2_HALSA|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ARPHSGAST 10
RPHSG T
Sbjct: 228 VRPHSGHGT 236


>sp|GCS2_HALS3|GLUTAMATE--CYSTEINE ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ARPHSGAST 10
RPHSG T
Sbjct: 228 VRPHSGHGT 236


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 RPHSGAS 9
+PHSG+S
Sbjct: 92 QPHSGSS 98


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 3 RPHSGAS 9
+PHSG+S
Sbjct: 92 QPHSGSS 98




62|SequenceR|315|306|LARGYAARPH

>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 3 RGYAARPH 10
+GY A PH
Sbjct: 107 KGYIAEPH 114


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 2 ARGYAARPH 10
+RG+ +PH
Sbjct: 329 SRGFGKKPH 337


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ARGYAARPH 10
ARGY+ PH
Sbjct: 86 ARGYSVVPH 94


>sp|GSA_SACI4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LARGYAAR 8
LARGY+ R
Sbjct: 130 LARGYSKR 137


>sp|GSA_SACI3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 LARGYAAR 8
LARGY+ R
Sbjct: 130 LARGYSKR 137


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 LARGYAARPH 10
LARGY R +
Sbjct: 121 LARGYTKRKY 130


>sp|GSA_SACI7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LARGYAAR 8
LARGY+ R
Sbjct: 130 LARGYSKR 137


>sp|GSA_SACI6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LARGYAAR 8
LARGY+ R
Sbjct: 130 LARGYSKR 137


>sp|GSA_SACI2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LARGYAAR 8
LARGY+ R
Sbjct: 130 LARGYSKR 137


>sp|GSA_SACI1|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LARGYAAR 8
LARGY+ R
Sbjct: 130 LARGYSKR 137


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 3 RGYAARP 9
RGYA RP
Sbjct: 115 RGYAVRP 121


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 3 RGYAARP 9
RGYA RP
Sbjct: 115 RGYAVRP 121


>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 121 LARGYTKR 128


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 122 LARGYTKR 129


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 125 LARGYTGR 132


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 125 LARGYTGR 132


>sp|PSB_PICTO|PROTEASOME subunit beta|Picrophilus torridus (strain ATCC 700027

Query: 1 LARGYAARPH 10
L GY +PH
Sbjct: 107 LVGGYDTKPH 116


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 126 LARGYTGR 133


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 126 LARGYTGR 133


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LARGYAAR 8
LAR YAAR
Sbjct: 83 LARPYAAR 90


>sp|GSA_AERPE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 126 LARGYTGR 133


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 1 LARGYAAR 8
+ARGYA++
Sbjct: 383 MARGYASK 390


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LARGYA 6
LARGYA
Sbjct: 127 LARGYA 132


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 3 RGYAARP 9
RGY +RP
Sbjct: 238 RGYISRP 244


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LARGYAAR 8
LARGY R
Sbjct: 118 LARGYTKR 125




63|SequenceR|320|311|GHTMSLARGY

>sp|PGK_THESM|PHOSPHOGLYCERATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GHTMSLARGY 10
GH +LA+G+
Sbjct: 227 GHVFTLAKGF 236


>sp|PGK_THEON|PHOSPHOGLYCERATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 GHTMSLARGY 10
GH +LA+G+
Sbjct: 227 GHVFTLAKGF 236


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GHTMSLARG 9
GH MS +RG
Sbjct: 527 GHKMSKSRG 535


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GHTMSLARG 9
GH MS +RG
Sbjct: 525 GHKMSKSRG 533


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GHTMSLARGY 10
G+ MS+A GY
Sbjct: 296 GNPMSMAAGY 305


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 HTMSLARGY 10
H M + RGY
Sbjct: 270 HCMPIQRGY 278


>sp|FAU1_NATPD|PROBABLE ribonuclease FAU-1|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GHTMSLARG 9
G T+SL RG
Sbjct: 323 GRTISLGRG 331


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 1 GHTMSLARGY 10
G+T+S + GY
Sbjct: 100 GNTISFSHGY 109


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GHTMSLARGY 10
GH +++A GY
Sbjct: 298 GHPVTMAAGY 307


>sp|ILVC_METS3|KETOL-ACID reductoisomerase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 GHTMSLARGY 10
G+T+S + GY
Sbjct: 100 GNTISFSHGY 109


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HTMSLARG 9
H MS ARG
Sbjct: 209 HVMSAARG 216


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 4 MSLARGY 10
MSL RGY
Sbjct: 77 MSLLRGY 83


>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 GHTMSLARGY 10
G+T+S + GY
Sbjct: 100 GNTISFSHGY 109


>sp|PELO_METHJ|PROTEIN pelota homolog|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HTMSLARGY 10
HT++L GY
Sbjct: 97 HTLNLEPGY 105




64|SequenceR|325|316|PSKVSGHTMS

>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SKVSGHT 8
SK++GHT
Sbjct: 82 SKITGHT 88


>sp|COBD_METM7|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 PSKVSGHTMS 10
PS SG+TM+
Sbjct: 246 PSPNSGYTMA 255


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 PSKVSGHTMS 10
PS SG+TM+
Sbjct: 246 PSPNSGYTMA 255


>sp|COBD_METJA|PROBABLE cobalamin biosynthesis protein CobD|Methanocaldococcus jannaschii

Query: 1 PSKVSGHTMS 10
PS SG+TM+
Sbjct: 245 PSPNSGYTMA 254


>sp|COBD_META3|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus aeolicus (strain

Query: 1 PSKVSGHTMS 10
PS SG+TM+
Sbjct: 246 PSPNSGYTMA 255


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 1 PSKVSGHTMS 10
PS SG+TM+
Sbjct: 246 PSPNSGYTMA 255


>sp|COBD_METMP|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 PSKVSGHTMS 10
PS SG+TM+
Sbjct: 246 PSPNSGYTMA 255


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 1 PSKVSGHTMS 10
P+K+ GH S
Sbjct: 100 PTKIGGHPRS 109


>sp|RS3A_THEON|SMALL ribosomal subunit protein eS1|Thermococcus onnurineus (strain

Query: 2 SKVSGHTMS 10
+K GHT+S
Sbjct: 84 TKFKGHTLS 92




65|SequenceR|330|321|TGNSIPSKVS

>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NSIPSKVS 10
N+IP+KVS
Sbjct: 263 NTIPTKVS 270


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TGNSIPSKV 9
TGN +PS+V
Sbjct: 354 TGNILPSRV 362


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 TGNSIP 6
TGNS+P
Sbjct: 164 TGNSVP 169


>sp|RNZ_METKA|RIBONUCLEASE Z|Methanopyrus kandleri (strain AV19 /

Query: 1 TGNSIPSK 8
TG ++PSK
Sbjct: 12 TGGAVPSK 19


>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TGNSIPSKVS 10
TGN++P K S
Sbjct: 277 TGNTLPRKPS 286


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GNSIPSKVS 10
G S+P K+S
Sbjct: 50 GKSVPFKIS 58


>sp|PCNA2_SULTO|DNA polymerase sliding clamp 2|Sulfurisphaera tokodaii (strain DSM

Query: 2 GNSIPSKVS 10
GN+IP K+
Sbjct: 223 GNNIPMKIE 231




66|SequenceR|335|326|GDFGFTGNSI

>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 1 GDFGFTGNSI 10
G+FG+ GN I
Sbjct: 141 GEFGYRGNKI 150


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FGFTGNSI 10
+GFTGN I
Sbjct: 316 YGFTGNWI 323


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 3 FGFTGNSI 10
+GFTGN I
Sbjct: 316 YGFTGNWI 323


>sp|NADM_THESM|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DFGFTGNSI 10
D FTGNS+
Sbjct: 96 DIVFTGNSL 104


>sp|PRIS_PICTO|DNA primase small subunit PriS|Picrophilus torridus (strain ATCC 700027

Query: 2 DFGFTGNSI 10
DFGF +SI
Sbjct: 127 DFGFDDDSI 135


>sp|MTAD_THEKO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DFGFTGNSI 10
D GF GN +
Sbjct: 233 DIGFLGNDV 241


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain DSM

Query: 2 DFGFTGNS 9
DF FTG+S
Sbjct: 159 DFLFTGDS 166


>sp|T1R1_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 FGFTGNSI 10
FGFTG +
Sbjct: 438 FGFTGTPV 445


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 GDFGFTGNSI 10
G FGF G +
Sbjct: 302 GKFGFKGEDV 311


>sp|TRUA_PYRIL|TRNA pseudouridine synthase A|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FGFTGNS 9
+GFTG+S
Sbjct: 15 YGFTGHS 21


>sp|NADM_THEON|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 DFGFTGNSI 10
D FTGNS+
Sbjct: 97 DVVFTGNSL 105


>sp|NADM_THEKO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DFGFTGNSI 10
D FTGNS+
Sbjct: 98 DVVFTGNSL 106


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GDFGFTGNS 9
G FG TG S
Sbjct: 274 GGFGLTGQS 282


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 3 FGFTGN 8
FGF GN
Sbjct: 558 FGFVGN 563


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GFTGNSI 10
GF GNSI
Sbjct: 143 GFYGNSI 149


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FGFTGNSI 10
FGF GN +
Sbjct: 225 FGFPGNGM 232


>sp|HEMH_THEAC|FERROCHELATASE acidophilum (strain ATCC 25905

Query: 2 DFGFTGNSI 10
DFGF G +
Sbjct: 199 DFGFQGGHL 207


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 3 FGFTGNSI 10
FGF GN +
Sbjct: 225 FGFPGNGM 232


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GFTGNSI 10
GF GNSI
Sbjct: 143 GFYGNSI 149


>sp|AATI_PYRHO|A-TYPE ATP synthase subunit I|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FGFTGN 8
FGF GN
Sbjct: 552 FGFVGN 557


>sp|DHYS_PYRCJ|PROBABLE deoxyhypusine synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FGFTGNSI 10
F FTGN +
Sbjct: 38 FSFTGNLV 45


>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 GDFGFTGN 8
G+FG TG+
Sbjct: 104 GNFGITGS 111


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 3 FGFTGN 8
FGF GN
Sbjct: 85 FGFAGN 90




67|SequenceR|340|331|DSRTHGDFGF

>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DSRTHGDFG 9
D +THGDFG
Sbjct: 81 DLKTHGDFG 89


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RTHGDFGF 10
+ +GDFGF
Sbjct: 559 KIYGDFGF 566


>sp|RNH2_THEPD|RIBONUCLEASE HII|Thermofilum pendens (strain DSM 2475

Query: 3 RTHGDFG 9
+T+GDFG
Sbjct: 169 KTYGDFG 175


>sp|RNH2_SULAC|RIBONUCLEASE HII|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RTHGDFG 9
+T+GDFG
Sbjct: 156 KTYGDFG 162


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HGDFGF 10
H DFGF
Sbjct: 225 HNDFGF 230


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 1 DSRTHGDFG 9
DSR HG F
Sbjct: 75 DSREHGVFA 83


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DSRTHGDFGF 10
D+R++GD F
Sbjct: 117 DARSYGDHTF 126


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 2 SRTHGDF 8
SR+HGD
Sbjct: 341 SRSHGDL 347


>sp|RNH2_CALMQ|RIBONUCLEASE HII|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 THGDFG 9
T+GDFG
Sbjct: 162 TYGDFG 167


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 THGDFGF 10
+HGD+G+
Sbjct: 104 SHGDYGW 110


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 RTHGDFGF 10
R HGD+ F
Sbjct: 77 RYHGDYRF 84




68|SequenceR|345|336|HYVHGDSRTH

>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 3 VHGDSRTH 10
+HGD RT+
Sbjct: 239 IHGDQRTY 246


>sp|RIO1_METJA|RIO-TYPE serine/threonine-protein kinase Rio1|Methanocaldococcus jannaschii

Query: 2 YVHGDSRTH 10
Y+ GD R H
Sbjct: 118 YIQGDPRFH 126


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 HYVHGD 6
HY+HG+
Sbjct: 716 HYIHGN 721


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 HYVHGD 6
HY+HG+
Sbjct: 716 HYIHGN 721


>sp|CBID_SACS2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 HYVHGDSR 8
HY GD+R
Sbjct: 262 HYSQGDAR 269


>sp|CBID_SACI7|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 HYVHGDSR 8
HY GD+R
Sbjct: 262 HYSQGDAR 269


>sp|CBID_SACI2|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HYVHGDSR 8
HY GD+R
Sbjct: 262 HYSQGDAR 269


>sp|CBID_SACI1|COBALT-PRECORRIN-5B C(1)-methyltransferase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 HYVHGDSR 8
HY GD+R
Sbjct: 262 HYSQGDAR 269


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 3 VHGDSRTH 10
+HGD+RT
Sbjct: 294 LHGDNRTQ 301


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 VHGDSRTH 10
+HGD+RT
Sbjct: 294 MHGDNRTQ 301


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 VHGDSRTH 10
+HGD+RT
Sbjct: 294 MHGDNRTQ 301


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VHGDSRTH 10
+HGD+RT
Sbjct: 294 MHGDNRTQ 301


>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YVHGD 6
YVHGD
Sbjct: 210 YVHGD 214


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 VHGDSRTH 10
+HGD TH
Sbjct: 865 IHGDPLTH 872


>sp|COFC_METSF|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus sp. (strain FS406-22)

Query: 2 YVHGDS 7
++HGDS
Sbjct: 184 FIHGDS 189


>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 3 VHGDSRT 9
++GDSRT
Sbjct: 378 INGDSRT 384


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VHGDSRTH 10
VHG TH
Sbjct: 439 VHGKQETH 446


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HYVHGDSRTH 10
++HG TH
Sbjct: 204 QWIHGPQSTH 213




69|SequenceR|350|341|DKHVTHYVHG

>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KHVTHYVHG 10
+HV YVHG
Sbjct: 205 EHVARYVHG 213


>sp|KAD6_METM7|PUTATIVE adenylate kinase|Methanococcus maripaludis (strain C7 /

Query: 1 DKHVTHYVH 9
D HV+HY++
Sbjct: 78 DGHVSHYLN 86


>sp|Y988_METJA|UNCHARACTERIZED protein MJ0988|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KHVTHYVH 9
KHV+ YVH
Sbjct: 262 KHVSKYVH 269


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKHVTHYVH 9
D HV H VH
Sbjct: 152 DVHVKHAVH 160


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKHVTHYVH 9
D HV H VH
Sbjct: 149 DVHVKHAVH 157


>sp|OGG1_SULTO|8-OXOGUANINE DNA glycosylase/AP lyase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DKHVTHYVH 9
D+HV H+++
Sbjct: 146 DRHVLHFLN 154


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 6 HYVHG 10
HY+HG
Sbjct: 716 HYIHG 720


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 6 HYVHG 10
HY+HG
Sbjct: 716 HYIHG 720


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DKHVTHYV 8
DK++ HYV
Sbjct: 146 DKNLAHYV 153


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DKHVTHYV 8
DK++ HYV
Sbjct: 149 DKNLAHYV 156


>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 2 KHVTHYVH 9
KH+ ++VH
Sbjct: 320 KHIVNFVH 327


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 THYVH 9
THY+H
Sbjct: 710 THYIH 714


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKHVTHYV 8
DK++ HYV
Sbjct: 146 DKNLAHYV 153


>sp|RL6_HALWD|LARGE ribosomal subunit protein uL6|Haloquadratum walsbyi (strain DSM

Query: 1 DKHVTHYVHG 10
+ HV++ +HG
Sbjct: 71 ESHVSNMIHG 80


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKHVTHYV 8
DK++ HYV
Sbjct: 150 DKNLAHYV 157


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VTHYVHG 10
V H++HG
Sbjct: 255 VRHWIHG 261


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KHVTHYV 8
KH+TH +
Sbjct: 337 KHITHTI 343




70|SequenceR|355|346|KYLGSDKHVT

>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LGSDKHVT 10
+GSDKH T
Sbjct: 53 IGSDKHYT 60


>sp|TRPD_SACS2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|COBQ_METKA|PROBABLE cobyric acid synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 KYLGSDKHV 9
+YLG+ +HV
Sbjct: 219 RYLGTVRHV 227


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 YLGSDKHV 9
+LG D+HV
Sbjct: 277 FLGKDEHV 284


>sp|CYNS_SULTO|CYANATE hydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KYLGSDK 7
KYLG DK
Sbjct: 27 KYLGRDK 33


>sp|GUAAA_SACS2|GMP synthase [glutamine-hydrolyzing] subunit A|Saccharolobus

Query: 1 KYLGSDKHV 9
KYLG+D V
Sbjct: 21 KYLGADIEV 29


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 KYLGSDKHV 9
K+LG KHV
Sbjct: 83 KFLGKFKHV 91


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 GSDKHVT 10
G+D+H+T
Sbjct: 206 GADEHIT 212


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 KYLGSDKHV 9
KYLG+D+ +
Sbjct: 229 KYLGNDERI 237


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 KYLGSDKH 8
+Y+G D+H
Sbjct: 521 EYVGGDEH 528


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 KYLGSDKHV 9
KY+G DK V
Sbjct: 109 KYVGEDKIV 117


>sp|RL13_METHJ|LARGE ribosomal subunit protein uL13|Methanospirillum hungatei JF-1

Query: 1 KYLGSDKHVT 10
K LG+ HVT
Sbjct: 119 KRLGNPSHVT 128


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 KYLGSDKH 8
+YLG D H
Sbjct: 1177 RYLGLDNH 1184




71|SequenceR|360|351|KHLLDKYLGS

>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 HLLDKYLGS 10
HLLDKYL S
Sbjct: 416 HLLDKYLAS 424


>sp|CARA_HALSA|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain ATCC

Query: 1 KHLLDKYLGS 10
+HL+D+Y+G+
Sbjct: 225 EHLVDEYIGT 234


>sp|CARA_HALS3|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain ATCC

Query: 1 KHLLDKYLGS 10
+HL+D+Y+G+
Sbjct: 225 EHLVDEYIGT 234


>sp|DNAG_CALMQ|DNA primase DnaG|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KHLLDKYLG 9
K L+DK+LG
Sbjct: 139 KELMDKFLG 147


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 HLLDKYLGS 10
HLLDK+L +
Sbjct: 412 HLLDKFLAN 420


>sp|AATE_METAC|A-TYPE ATP synthase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 KHLLDKYLGS 10
KH++DKY S
Sbjct: 106 KHIIDKYEAS 115


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LLDKYLG 9
LLDKYLG
Sbjct: 425 LLDKYLG 431


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KHLLDKYLGS 10
K+ L KYLGS
Sbjct: 68 KYYLKKYLGS 77


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HLLDKYLG 9
HLL +YLG
Sbjct: 82 HLLSRYLG 89


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 1 KHLLDKYLG 9
+H +DK+LG
Sbjct: 284 RHAVDKFLG 292


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HLLDKYLG 9
HLL +YLG
Sbjct: 82 HLLSRYLG 89


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 2 HLLDKYLG 9
HL+++YLG
Sbjct: 134 HLIEEYLG 141


>sp|RTCA_PYRHO|RNA 3'-terminal phosphate cyclase|Pyrococcus horikoshii (strain ATCC

Query: 2 HLLDKYLG 9
H +DK+LG
Sbjct: 278 HCVDKFLG 285


>sp|FAU1_THEPD|PROBABLE ribonuclease FAU-1|Thermofilum pendens (strain DSM 2475

Query: 1 KHLLDKYLG 9
KHLL+K +G
Sbjct: 458 KHLLEKDIG 466


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 KHLLDKYLG 9
K L+D+Y+G
Sbjct: 412 KKLVDRYIG 420


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHLLDKYLG 9
+H+LD Y G
Sbjct: 167 RHILDWYFG 175


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 HLLDKYLG 9
H+LD YL
Sbjct: 343 HILDDYLA 350


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KHLLDKYLG 9
+H+LD Y G
Sbjct: 166 RHILDWYWG 174


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 4 LDKYLGS 10
+D+YLGS
Sbjct: 80 IDRYLGS 86


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii

Query: 3 LLDKYLG 9
LLD+Y+G
Sbjct: 12 LLDRYIG 18


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 4 LDKYLG 9
LDKY+G
Sbjct: 277 LDKYMG 282


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 2 HLLDKYL 8
HL++KY+
Sbjct: 131 HLIEKYM 137


>sp|Y541_ARCFU|UNCHARACTERIZED protein AF_0541|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HLLDKYLGS 10
HL+ KYL S
Sbjct: 48 HLMTKYLVS 56


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KHLLDKYLG 9
+H+LD Y G
Sbjct: 166 RHILDWYWG 174


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HLLDKYLG 9
HL++++LG
Sbjct: 102 HLIEEFLG 109


>sp|LYSY_THEKO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 LLDKYLGS 10
++D YLGS
Sbjct: 79 IIDDYLGS 86




72|SequenceR|365|356|RDIHIKHLLD

>sp|RRP41_NITMS|EXOSOME complex component Rrp41|Nitrosopumilus maritimus (strain SCM1)

Query: 1 RDIHIKHLLD 10
RD+H KH+ D
Sbjct: 60 RDVHPKHMSD 69


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 1 RDIHIKHLL 9
RD+H KH++
Sbjct: 60 RDVHPKHMV 68


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 1 RDIHIKHLLD 10
+DI I H LD
Sbjct: 28 KDIDISHFLD 37


>sp|RRP41_PYRFU|EXOSOME complex component Rrp41|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RDIHIKHL 8
R+IH KHL
Sbjct: 60 REIHPKHL 67


>sp|RRP41_ARCFU|EXOSOME complex component Rrp41|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RDIHIKHLLD 10
R++H +HL D
Sbjct: 60 REVHPRHLQD 69


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RDIHIKHLL 9
RD+ KHLL
Sbjct: 364 RDVGFKHLL 372


>sp|RRP41_THEON|EXOSOME complex component Rrp41|Thermococcus onnurineus (strain NA1)

Query: 1 RDIHIKHL 8
R+IH KHL
Sbjct: 60 REIHPKHL 67


>sp|RRP41_THEKO|EXOSOME complex component Rrp41|Thermococcus kodakarensis (strain ATCC

Query: 1 RDIHIKHL 8
R+IH KHL
Sbjct: 60 REIHPKHL 67


>sp|RRP41_THEGJ|EXOSOME complex component Rrp41|Thermococcus gammatolerans (strain DSM

Query: 1 RDIHIKHL 8
R+IH KHL
Sbjct: 60 REIHPKHL 67


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 RDIHIKHLL 9
+D+H HLL
Sbjct: 364 KDLHFGHLL 372


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DIHIKH 7
D+H+KH
Sbjct: 152 DVHVKH 157


>sp|Y1209_PYRHO|UNCHARACTERIZED protein PH1209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DIHIKH 7
D+H+KH
Sbjct: 149 DVHVKH 154


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 2 DIHIKH 7
D+H+KH
Sbjct: 149 DVHVKH 154


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DIHIKH 7
D+H+KH
Sbjct: 149 DVHVKH 154


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 RDIHIKHLLD 10
+DI+++H +D
Sbjct: 263 QDIYVEHTID 272


>sp|RRP41_PYRHO|EXOSOME complex component Rrp41|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RDIHIKHL 8
R++H KHL
Sbjct: 60 RELHSKHL 67


>sp|RRP41_PYRAB|EXOSOME complex component Rrp41|Pyrococcus abyssi (strain GE5 /

Query: 1 RDIHIKHL 8
R++H KHL
Sbjct: 60 RELHPKHL 67


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 4 HIKHLLD 10
H+KHL++
Sbjct: 84 HVKHLIE 90


>sp|ARGC_METLZ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 IHIKHLLD 10
IH+K+L+D
Sbjct: 46 IHLKNLID 53


>sp|RPO1C_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfurisphaera tokodaii (strain DSM

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus solfataricus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 346 EVTVKHLLD 354


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IHIKHLL 9
IH+K+LL
Sbjct: 275 IHVKYLL 281


>sp|RPO1C_METS5|DNA-DIRECTED RNA polymerase subunit Rpo1C|Metallosphaera sedula (strain ATCC

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIHIKH 7
D+H+KH
Sbjct: 151 DVHVKH 156


>sp|RPO1C_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus shibatae (strain ATCC

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RPO1C_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo1C|Saccharolobus islandicus (strain

Query: 2 DIHIKHLLD 10
++ +KHLLD
Sbjct: 345 EVTVKHLLD 353


>sp|RIBL_METTP|FAD synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RDIHIKH 7
RDI++KH
Sbjct: 41 RDINVKH 47


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 DIHIKHLL 9
D+H+KH L
Sbjct: 115 DLHLKHKL 122




73|SequenceR|370|361|KEEPGRDIHI

>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 KEEPGRDIHI 10
+E+PGR +H+
Sbjct: 126 EEDPGRSVHM 135


>sp|Y735_METS5|UPF0284 protein Msed_0735|Metallosphaera sedula (strain ATCC 51363

Query: 3 EPGRDI 8
EPGRDI
Sbjct: 113 EPGRDI 118


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EEPGRDI 8
E PGRDI
Sbjct: 199 ENPGRDI 205


>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEPGRDIH 9
E PGRDI
Sbjct: 199 ENPGRDIR 206


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 1 KEEPGRDIHI 10
+E+PGR +H+
Sbjct: 127 EEDPGRLVHM 136


>sp|Y030_SACI1|UPF0284 protein YN1551_0030|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|Y030_SACI7|UPF0284 protein YG5714_0030|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|Y030_SACI2|UPF0284 protein LS215_0030|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|RS13_PYRAE|SMALL ribosomal subunit protein uS13|Pyrobaculum aerophilum (strain

Query: 3 EPGRDIHI 10
E GRD+H+
Sbjct: 86 ETGRDLHL 93


>sp|Y2213_SACS2|UPF0284 protein SSO2213|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|Y030_SACI4|UPF0284 protein M1425_0030|Saccharolobus islandicus (strain M.14.25 /

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|NK_METTH|NUCLEOSIDE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 EPGRDIHI 10
+PG+D+H+
Sbjct: 163 DPGQDLHM 170


>sp|Y030_SACI6|UPF0284 protein M164_0030|Saccharolobus islandicus (strain M.16.4 /

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|Y030_SACI3|UPF0284 protein M1627_0030|Saccharolobus islandicus (strain M.16.27)

Query: 3 EPGRDI 8
EPG+DI
Sbjct: 112 EPGKDI 117


>sp|RRP4_KORCO|EXOSOME complex component Rrp4|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KEEPGRDIHI 10
K +PG+D+++
Sbjct: 24 KVKPGKDVYV 33


>sp|RS13_PYRFU|SMALL ribosomal subunit protein uS13|Pyrococcus furiosus (strain ATCC

Query: 3 EPGRDIHI 10
E GRD+H+
Sbjct: 86 ETGRDLHL 93


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KEEPGRDIH 9
K++PG D H
Sbjct: 78 KDQPGYDTH 86


>sp|RS13_PYRAB|SMALL ribosomal subunit protein uS13|Pyrococcus abyssi (strain GE5 /

Query: 3 EPGRDIHI 10
E GRD+H+
Sbjct: 86 ETGRDLHL 93


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 KEEPGRDIHI 10
+E+PG+ +HI
Sbjct: 130 EEDPGKLVHI 139


>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 4 PGRDIHI 10
PG+D++I
Sbjct: 197 PGKDVYI 203


>sp|RS13_PYRCJ|SMALL ribosomal subunit protein uS13|Pyrobaculum calidifontis (strain

Query: 3 EPGRDIHI 10
E GRD+H+
Sbjct: 86 ETGRDLHL 93


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 1 KEEPGRDIHI 10
+E+PG+ +HI
Sbjct: 130 EEDPGKLVHI 139


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 KEEPGRDIHI 10
+E+PG+ +HI
Sbjct: 130 EEDPGKLVHI 139


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PGRDIH 9
PG+DIH
Sbjct: 52 PGQDIH 57


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 EEPGRDIHI 10
E+PG+ +HI
Sbjct: 131 EDPGKLVHI 139


>sp|RS13_PYRAR|SMALL ribosomal subunit protein uS13|Pyrobaculum arsenaticum (strain

Query: 3 EPGRDIHI 10
E GRD+H+
Sbjct: 86 ETGRDMHL 93


>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 4 PGRDIHI 10
PG+DI++
Sbjct: 197 PGKDIYV 203


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEPGRDIHI 10
EEP IH+
Sbjct: 162 EEPANSIHL 170


>sp|ARLY_HALSA|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PGRDIH 9
PG D+H
Sbjct: 78 PGEDVH 83


>sp|ARLY_HALS3|ARGININOSUCCINATE lyase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PGRDIH 9
PG D+H
Sbjct: 78 PGEDVH 83


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KEEPGRDIHI 10
KE+PG+ ++I
Sbjct: 134 KEKPGKTMNI 143


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 4 PGRDIHI 10
PG DIH+
Sbjct: 109 PGFDIHV 115


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 3 EPGRDIHI 10
EPG D+++
Sbjct: 223 EPGSDVYV 230


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PGRDIHI 10
PG DIH+
Sbjct: 109 PGFDIHV 115


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 3 EPGRDIHI 10
+PG+D H+
Sbjct: 281 KPGKDTHL 288


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EEPGRDIH 9
E PG D+H
Sbjct: 280 EVPGSDLH 287


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 KEEPGRDIHI 10
KEE G DI +
Sbjct: 440 KEETGADIRV 449


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EEPGRDIH 9
E PG D+H
Sbjct: 81 ERPGWDMH 88


>sp|FEN_PYRHO|FLAP endonuclease 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PGRDIHI 10
PG+D+++
Sbjct: 197 PGKDVYV 203


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EEPGRDIH 9
E PG D+H
Sbjct: 81 ERPGWDMH 88


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EEPGRDIH 9
E PG D+H
Sbjct: 81 ERPGWDMH 88


>sp|RTCA_HYPBU|RNA 3'-terminal phosphate cyclase|Hyperthermus butylicus (strain DSM

Query: 3 EPGRDIHI 10
EP RD H+
Sbjct: 231 EPSRDPHL 238


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PGRDIHI 10
PG+ IHI
Sbjct: 75 PGKTIHI 81


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 4 PGRDIHI 10
PGRD H+
Sbjct: 233 PGRDPHL 239




74|SequenceR|375|366|SEQAPKEEPG

>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EQAPKEEPG 10
EQ PK EPG
Sbjct: 280 EQLPKAEPG 288


>sp|SYS_KORCO|SERINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 EQAPKEE 8
EQAPKEE
Sbjct: 440 EQAPKEE 446


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EQAPKEEPG 10
E+ PK EPG
Sbjct: 276 EEVPKAEPG 284


>sp|EF1A_HALMA|ELONGATION factor 1-alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 EQAPKEEPG 10
E+ PK EPG
Sbjct: 275 EEVPKAEPG 283


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQAPKEEPG 10
EQ P+ EPG
Sbjct: 280 EQIPQAEPG 288


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 3 QAPKEEPG 10
QAP EPG
Sbjct: 43 QAPIHEPG 50


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 SEQAPKEEP 9
+EQAP +EP
Sbjct: 288 AEQAPIDEP 296


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 1 SEQAPKEEP 9
+EQAP +EP
Sbjct: 288 AEQAPIDEP 296


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 EQAPKEEPG 10
EQA +E PG
Sbjct: 400 EQAIRENPG 408


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 2 EQAPKEEPG 10
EQ P EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 2 EQAPKEEPG 10
EQ P EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 2 EQAPKEEPG 10
EQ P EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 2 EQAPKEEPG 10
EQ P EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 2 EQAPKEEPG 10
EQ P EPG
Sbjct: 280 EQLPSAEPG 288


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 2 EQAPKEEPG 10
EQ P EPG
Sbjct: 280 EQLPSAEPG 288




75|SequenceR|380|371|LLRYNSEQAP

>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 RYNSEQAP 10
+Y SE+AP
Sbjct: 442 KYESEEAP 449




76|SequenceR|385|376|SNNRRLLRYN

>sp|GLK_AERPE|GLUCOKINASE pernix (strain ATCC 700893

Query: 2 NNRRLLR 8
NNRR+LR
Sbjct: 267 NNRRMLR 273


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 3 NRRLLRY 9
NRRLLR+
Sbjct: 115 NRRLLRW 121


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SNNRRLLRY 9
++N R+LRY
Sbjct: 390 NDNERVLRY 398


>sp|TRUA_METMA|TRNA pseudouridine synthase A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NNRRLLRY 9
N++R+LRY
Sbjct: 248 NSKRILRY 255


>sp|RL18E_THEON|LARGE ribosomal subunit protein eL18|Thermococcus onnurineus (strain

Query: 2 NNRRLLRY 9
N RRL+RY
Sbjct: 10 NLRRLIRY 17




77|SequenceR|390|381|TYCTYSNNRR

>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 1 TYCTYSNN 8
++C YSNN
Sbjct: 12 SFCNYSNN 19


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YCTYSNNRR 10
YCTY +R
Sbjct: 5 YCTYMTGKR 13


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YCTYSNNRR 10
Y +Y NNRR
Sbjct: 626 YRSYKNNRR 634


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YCTYSN 7
YC Y+N
Sbjct: 23 YCNYTN 28


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 2 YCTYSNNR 9
+C++ NN+
Sbjct: 66 FCSFKNNK 73


>sp|SECD_HALWD|PROTEIN-EXPORT membrane protein SecD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TYCTYSNNR 9
T CTYS ++
Sbjct: 266 TRCTYSRDQ 274


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 2 YCTYSNNR 9
YCT N+R
Sbjct: 252 YCTGENSR 259


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 2 YCTYSNNR 9
YCT N+R
Sbjct: 252 YCTGENSR 259




78|SequenceR|395|386|GCIAATYCTY

>sp|VHCD_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Archaeoglobus profundus (strain

Query: 2 CIAATYCTY 10
CIA +CTY
Sbjct: 11 CIACNWCTY 19


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 GCIAATYCT 9
GCI A CT
Sbjct: 180 GCIVANTCT 188


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 6 TYCTY 10
TYCTY
Sbjct: 58 TYCTY 62


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 6 TYCTY 10
TYCTY
Sbjct: 58 TYCTY 62


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 6 TYCTY 10
TYCTY
Sbjct: 55 TYCTY 59


>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GCIAATYCTY 10
GC A CT+
Sbjct: 46 GCSATLLCTH 55


>sp|END3_SULAC|ENDONUCLEASE III|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CIAATYCTY 10
C+ YC Y
Sbjct: 208 CVIRDYCKY 216




79|SequenceR|400|391|AHVPLGCIAA

>sp|KPTA_PYRHO|PROBABLE RNA 2'-phosphotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HVPLGCIAA 10
HVP+ CI+
Sbjct: 167 HVPVDCISG 175


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 69 HSPVGCTA 76


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 69 HSPVGCTA 76


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 70 HSPVGCTA 77


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 70 HSPVGCTA 77


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HVPLGCIA 9
HVP+ CI+
Sbjct: 172 HVPVECIS 179


>sp|HEM3_CALMQ|PROBABLE porphobilinogen deaminase|Caldivirga maquilingensis (strain ATCC

Query: 2 HVPLGCIA 9
HVPLG +A
Sbjct: 239 HVPLGGLA 246


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 94 HGPIGCAA 101


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 94 HGPIGCAA 101


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 2 HVPLGCIAA 10
H+P C+ A
Sbjct: 198 HIPANCVEA 206


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VPLGCIA 9
VP+GC A
Sbjct: 249 VPIGCCA 255


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 87 HGPVGCAA 94


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 HVPLGCIA 9
H P+GC A
Sbjct: 84 HGPVGCAA 91


>sp|RADB_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 HVPLGCIA 9
H+P GC A
Sbjct: 7 HLPTGCGA 14


>sp|RADB_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 HVPLGCIA 9
H+P GC A
Sbjct: 7 HLPTGCGA 14




80|SequenceR|405|396|AARFTAHVPL

>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 RFTAHVPL 10
RF HVPL
Sbjct: 526 RFANHVPL 533


>sp|SYE_THEKO|GLUTAMATE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AARFTAHVPL 10
A FTA +PL
Sbjct: 427 AQEFTAEIPL 436


>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ARFTAHVP 9
+RF +H+P
Sbjct: 38 SRFESHIP 45


>sp|RTCA_METBF|RNA 3'-terminal phosphate cyclase|Methanosarcina barkeri (strain Fusaro

Query: 1 AARFTAHVPL 10
A+ AHVPL
Sbjct: 191 ASNLPAHVPL 200


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FTAHVPL 10
FT H PL
Sbjct: 191 FTTHTPL 197


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ARFTAHVP 9
ARFTA+ P
Sbjct: 169 ARFTAYQP 176




81|SequenceR|410|401|PASSDAARFT

>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 PASSDAARF 9
PA S AARF
Sbjct: 14 PAGSSAARF 22


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PASSDAARFT 10
PAS ARFT
Sbjct: 362 PASHPNARFT 371


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PASSDAARFT 10
PAS ARFT
Sbjct: 360 PASHPNARFT 369


>sp|PCKG_SULAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PASSDAARFT 10
PAS ARFT
Sbjct: 360 PASHPNARFT 369


>sp|MAP2_ARCFU|METHIONINE aminopeptidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SSDAARFT 10
+SDAA FT
Sbjct: 60 NSDAAHFT 67


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PASSDAARF 9
P S +AARF
Sbjct: 421 PVSPEAARF 429




82|SequenceR|415|406|KESDEPASSD

>sp|PDAD_PYRHO|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ESDEPASS 9
ESDEP S+
Sbjct: 74 ESDEPGST 81


>sp|PDAD_THESM|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 ESDEPASS 9
ESDEP S+
Sbjct: 74 ESDEPGST 81


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 1 KESDEPASSD 10
+E+D PAS D
Sbjct: 82 READRPASLD 91


>sp|PDAD_PYRFU|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ESDEPASS 9
ESDEP S+
Sbjct: 74 ESDEPGST 81


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 2 ESDEPASSD 10
E+DEP ++D
Sbjct: 300 ETDEPVTAD 308


>sp|PDAD_PYRAB|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 ESDEPASS 9
ESDEP S+
Sbjct: 74 ESDEPGST 81




83|SequenceR|420|411|TDGVLKESDE

>sp|CSG_METVO|S-LAYER protein|Methanococcus voltae

Query: 2 DGVLKESD 9
DGVLKE D
Sbjct: 274 DGVLKEGD 281


>sp|IF2P_METS5|PROBABLE translation initiation factor IF-2|Metallosphaera sedula (strain

Query: 2 DGVLKESD 9
DG+L++SD
Sbjct: 259 DGILRKSD 266


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 2 DGVLKESDE 10
DGVL+ +DE
Sbjct: 255 DGVLRTNDE 263


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 TDGVLKESDE 10
TDG LKE +E
Sbjct: 223 TDGSLKELNE 232


>sp|RL18_THEPD|LARGE ribosomal subunit protein uL18|Thermofilum pendens (strain DSM 2475

Query: 2 DGVLKESD 9
DGVL E D
Sbjct: 134 DGVLPEDD 141


>sp|GGGPS_METM7|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 TDGVLKESD 9
DGV KE+D
Sbjct: 81 VDGVTKEAD 89


>sp|GGGPS_METMP|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 TDGVLKESD 9
DGV KE+D
Sbjct: 81 VDGVTKEAD 89


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 TDGVLKESD 9
DGV KE+D
Sbjct: 81 VDGVTKEAD 89


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 TDGVLKESD 9
DGV KE+D
Sbjct: 81 VDGVTKEAD 89


>sp|GGGPS_METVS|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TDGVLKESD 9
DGV KE+D
Sbjct: 81 VDGVTKEAD 89


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DGVLKESDE 10
+G+LK +DE
Sbjct: 360 EGILKAADE 368


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DGVLKESDE 10
+G+LK +DE
Sbjct: 360 EGILKAADE 368


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DGVLKE 7
DGVLKE
Sbjct: 302 DGVLKE 307




84|SequenceR|425|416|KSYSVTDGVL

>sp|TRM56_METTP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothrix

Query: 2 SYSVTDGV 9
S+SVTDG+
Sbjct: 57 SFSVTDGI 64


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 2 SYSVTDGV 9
SYS DGV
Sbjct: 44 SYSAKDGV 51


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 SYSVTDGVL 10
SYS DG+L
Sbjct: 238 SYSCPDGLL 246


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 2 SYSVTDGVL 10
SYSV DG +
Sbjct: 376 SYSVRDGTV 384


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SYSVTDGVL 10
SYS +DG+L
Sbjct: 232 SYSDSDGLL 240


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 SYSVTDGVL 10
SYS +DG+L
Sbjct: 230 SYSDSDGLL 238




85|SequenceR|430|421|YRLRKKSYSV

>sp|FTSY_METJA|SIGNAL recognition particle receptor FtsY|Methanocaldococcus jannaschii

Query: 1 YRLRKKSYSV 10
Y+L++K YSV
Sbjct: 224 YKLKQKGYSV 233


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YRLRKKSYSV 10
YR+R+K++ V
Sbjct: 75 YRVRRKAFEV 84


>sp|ARCH_PYRHO|PROTEIN archease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YRLRKKSY 8
YRLR K+Y
Sbjct: 94 YRLRAKAY 101


>sp|RFCL_THEVO|REPLICATION factor C large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YRLRKKSYS 9
Y RKK+YS
Sbjct: 151 YEFRKKNYS 159


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YRLRKKSYSV 10
Y ++KK YSV
Sbjct: 424 YIVQKKKYSV 433


>sp|PSB_ACIB4|PROTEASOME subunit beta|Aciduliprofundum boonei (strain DSM 19572

Query: 1 YRLRKKSY 8
YR+R+K Y
Sbjct: 73 YRIRRKMY 80




86|SequenceR|435|426|SSYSDYRLRK

>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 SYSDYRLRK 10
+Y DYRL+K
Sbjct: 238 NYLDYRLKK 246


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 SSYSDYRLR 9
SS +DYRLR
Sbjct: 213 SSATDYRLR 221


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SYSDYRLRK 10
SY++++LRK
Sbjct: 750 SYNEFQLRK 758


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 2 SYSDYRL 8
SYSDY L
Sbjct: 116 SYSDYAL 122


>sp|MFNB_METMA|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSYSDYR 7
S YSDY+
Sbjct: 120 SGYSDYK 126


>sp|MFNB_METBF|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSYSDYR 7
S YSDY+
Sbjct: 120 SGYSDYK 126


>sp|MFNB_METAC|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSYSDYR 7
S YSDY+
Sbjct: 120 SGYSDYK 126


>sp|FERCR_ARCFU|FERRIC-CHELATE reductase (NAD(P)H)|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SYSDYRLRK 10
+Y+DY L K
Sbjct: 146 TYADYHLMK 154


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 SSYSDYRLR 9
S+ +DYRLR
Sbjct: 211 SNATDYRLR 219




87|SequenceR|440|431|VANCYSSYSD

>sp|RS11_METS3|SMALL ribosomal subunit protein uS11|Methanobrevibacter smithii (strain

Query: 1 VANCYSSYSD 10
+AN YSSY++
Sbjct: 9 IANIYSSYNN 18


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 3 NCYSSY 8
NCYS+Y
Sbjct: 474 NCYSNY 479


>sp|RS11_METTH|SMALL ribosomal subunit protein uS11|Methanothermobacter

Query: 1 VANCYSSYSD 10
+AN YSS+++
Sbjct: 9 IANIYSSFNN 18


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CYSSYSD 10
C+S YSD
Sbjct: 113 CFSEYSD 119


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 4 CYSSYSD 10
CYS+Y++
Sbjct: 370 CYSAYAE 376


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NCYSSYS 9
N YSSYS
Sbjct: 502 NIYSSYS 508


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 1 VANCYSSY 8
V N YSSY
Sbjct: 8 VENLYSSY 15


>sp|G3P_THEVO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NCYSSYSD 10
N YS+Y+D
Sbjct: 120 NAYSNYND 127


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 CYSSYSD 10
CY+SY +
Sbjct: 408 CYASYGE 414


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 CYSSYSD 10
CY+SY +
Sbjct: 408 CYASYGE 414




88|SequenceR|445|436|IEAEAVANCY

>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EAEAVANC 9
EAE + NC
Sbjct: 442 EAEMIVNC 449


>sp|PANB_NATPD|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 2 EAEAVANC 9
EA+AV NC
Sbjct: 90 EADAVDNC 97


>sp|Y2383_SULTO|UNCHARACTERIZED protein STK_23830|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IEAEAVANC 9
IEAEA+ N
Sbjct: 13 IEAEAIVNA 21




89|SequenceR|450|441|GEEAEIEAEA

>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 GEEAEIEAEA 10
G+EA+ EA+A
Sbjct: 569 GDEAQSEADA 578


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GEEAEIEAE 9
G+EA++EAE
Sbjct: 166 GDEAKMEAE 174




90|SequenceR|455|446|KMEVGGEEAE

>sp|Y1211_METTH|PUTATIVE transport protein MTH_1211|Methanothermobacter thermautotrophicus

Query: 1 KMEVGGEEAE 10
+ME GGEE +
Sbjct: 325 RMESGGEEVQ 334


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MEVGGEEAE 10
+++GGEEA+
Sbjct: 200 LDIGGEEAK 208


>sp|AROC_KORCO|CHORISMATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 MEVGGEEAE 10
+E+GGE AE
Sbjct: 158 LEIGGERAE 166


>sp|RS6E_THEON|SMALL ribosomal subunit protein eS6|Thermococcus onnurineus (strain

Query: 1 KMEVGGEEAE 10
++E+ GEEAE
Sbjct: 18 QVEISGEEAE 27


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EVGGEEA 9
E+GGEEA
Sbjct: 15 EIGGEEA 21


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 EVGGEEAE 10
E+G EEAE
Sbjct: 131 EIGREEAE 138




91|SequenceR|460|451|LESALKMEVG

>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 2 ESALKMEVG 10
E ALK EVG
Sbjct: 146 EKALKEEVG 154


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 ALKMEVG 10
ALK+EVG
Sbjct: 1028 ALKLEVG 1034




92|SequenceR|465|456|QDPDALESAL

>sp|LYSZ_METS5|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 PDALESAL 10
PDA+ SAL
Sbjct: 247 PDAINSAL 254


>sp|Y1633_METJA|UNCHARACTERIZED protein MJ1633|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPDALESAL 10
DPDA+ SA+
Sbjct: 176 DPDAIASAM 184


>sp|AATC_HALVD|A-TYPE ATP synthase subunit C|Haloferax volcanii (strain ATCC 29605

Query: 2 DPDALESAL 10
DPDA+E+ L
Sbjct: 337 DPDAIEAEL 345


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DPDALESA 9
DPDA+E+A
Sbjct: 209 DPDAVEAA 216


>sp|PYRE_THEGJ|OROTATE phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 DPDALE 7
DPDALE
Sbjct: 43 DPDALE 48


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPDALESAL 10
+PDALE+ L
Sbjct: 140 NPDALEAGL 148


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DPDALES 8
DP+ALES
Sbjct: 781 DPNALES 787


>sp|RPIA_HALLT|RIBOSE-5-PHOSPHATE isomerase A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DPDALESAL 10
DPDAL + L
Sbjct: 200 DPDALSTTL 208


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 DPDALESA 9
DPD LES
Sbjct: 205 DPDTLESV 212


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QDPDALESAL 10
+DPDAL S +
Sbjct: 481 KDPDALVSTV 490


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QDPDALESA 9
Q+PD ESA
Sbjct: 739 QEPDGAESA 747


>sp|MTRA_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain C7

Query: 1 QDPDALE 7
QDPDA++
Sbjct: 155 QDPDAID 161


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DPDALESAL 10
DP+ALE L
Sbjct: 179 DPEALEELL 187


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QDPDALE 7
Q PDALE
Sbjct: 152 QGPDALE 158




93|SequenceR|470|461|PDERPQDPDA

>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 PDERPQDPDA 10
P+ RP+DP A
Sbjct: 508 PEGRPKDPKA 517


>sp|HIS5_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 5 PQDPD 9
PQDPD
Sbjct: 144 PQDPD 148


>sp|MTSB_METMA|METHYLATED-THIOL--CORRINOID protein MtsB|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RPQDPD 9
RP+DPD
Sbjct: 57 RPKDPD 62


>sp|Y1407_ARCFU|UNCHARACTERIZED protein AF_1407|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDERPQDPDA 10
P ERP++P +
Sbjct: 92 PKERPKNPKS 101


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PDERPQDP 8
PDE PQ P
Sbjct: 6 PDEVPQKP 13


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PDERPQDPDA 10
P+ RP+DP A
Sbjct: 508 PEGRPKDPKA 517


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 1 PDERPQDP 8
PDER +DP
Sbjct: 206 PDERFRDP 213


>sp|RL30_THEPD|LARGE ribosomal subunit protein uL30|Thermofilum pendens (strain DSM

Query: 1 PDERPQDPDA 10
PD RP++ A
Sbjct: 13 PDRRPEEEKA 22


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PDERPQDP 8
PD+ P DP
Sbjct: 207 PDKAPHDP 214


>sp|HISX_SACS2|HISTIDINOL dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PDERPQD 7
P+ERP D
Sbjct: 7 PNERPND 13


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 PDERPQD 7
PD+RP+D
Sbjct: 572 PDKRPED 578


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 1 PDERPQDPD 9
PD P DPD
Sbjct: 126 PDLVPVDPD 134


>sp|RPO3_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus abyssi (strain GE5 /

Query: 1 PDERPQDPD 9
PD +P +PD
Sbjct: 109 PDVKPANPD 117


>sp|UVRC_HALLT|UVRABC system protein C|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 ERPQDPD 9
ERP DPD
Sbjct: 331 ERPSDPD 337


>sp|SYN_THEVO|ASPARAGINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PDERPQDPD 9
P PQDPD
Sbjct: 326 PFYMPQDPD 334


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 PDERPQDPDA 10
PD RP P+A
Sbjct: 304 PDFRPPSPEA 313


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PDERPQDP 8
PDER +DP
Sbjct: 799 PDERFRDP 806


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 PDERPQDPDA 10
P+E +DPD+
Sbjct: 587 PEEIMEDPDS 596




94|SequenceR|475|466|KEEEAPDERP

>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 KEEEAPDERP 10
KEEE PD+ P
Sbjct: 458 KEEEIPDKDP 467


>sp|MNTP_METHJ|MANGANESE exporter MntP|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EEEAPD 7
EEEAPD
Sbjct: 95 EEEAPD 100


>sp|RL18A_SACS2|LARGE ribosomal subunit protein eL20|Saccharolobus solfataricus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|RL18A_SACI7|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|RL18A_SACI6|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|RL18A_SACI4|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|RL18A_SACI3|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|RL18A_SACI2|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|RL18A_SACI1|LARGE ribosomal subunit protein eL20|Saccharolobus islandicus (strain

Query: 1 KEEEAPDER 9
KEEE PD R
Sbjct: 66 KEEEIPDRR 74


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 EEEAPDERP 10
+E PDERP
Sbjct: 91 DESVPDERP 99


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 3 EEAPDERP 10
E+ PDERP
Sbjct: 91 EDQPDERP 98




95|SequenceR|480|471|ADKEEKEEEA

>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 3 KEEKEEEA 10
KE+K EEA
Sbjct: 295 KEDKAEEA 302


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 3 KEEKEEEA 10
KE+K EEA
Sbjct: 293 KEDKTEEA 300


>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 3 KEEKEEEA 10
KE+K EEA
Sbjct: 295 KEDKTEEA 302




96|SequenceR|485|476|LHVEPADKEE

>sp|RL14E_SACS2|LARGE ribosomal subunit protein eL14|Saccharolobus solfataricus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SACI7|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SACI6|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SACI4|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SACI3|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SACI2|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SACI1|LARGE ribosomal subunit protein eL14|Saccharolobus islandicus (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_SULTO|LARGE ribosomal subunit protein eL14|Sulfurisphaera tokodaii (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHLEPTDKK 60


>sp|RL14E_METVS|LARGE ribosomal subunit protein eL14|Methanococcus vannielii (strain

Query: 2 HVEPADKE 9
HVEP DK+
Sbjct: 48 HVEPTDKK 55


>sp|RL14E_METMP|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 2 HVEPADKE 9
HVEP DK+
Sbjct: 48 HVEPTDKK 55


>sp|RL14E_METM7|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 2 HVEPADKE 9
HVEP DK+
Sbjct: 48 HVEPTDKK 55


>sp|RL14E_METM6|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 2 HVEPADKE 9
HVEP DK+
Sbjct: 48 HVEPTDKK 55


>sp|RL14E_SULAC|LARGE ribosomal subunit protein eL14|Sulfolobus acidocaldarius (strain

Query: 1 LHVEPADKE 9
LH+EP DK+
Sbjct: 52 LHIEPTDKK 60


>sp|RL14E_PYRAR|LARGE ribosomal subunit protein eL14|Pyrobaculum arsenaticum (strain

Query: 2 HVEPADKE 9
H+EP DK+
Sbjct: 54 HIEPTDKK 61


>sp|RL14E_PYRNV|LARGE ribosomal subunit protein eL14|Pyrobaculum neutrophilum (strain

Query: 2 HVEPADKE 9
H+EP DK+
Sbjct: 54 HIEPTDKK 61


>sp|RL14E_PYRIL|LARGE ribosomal subunit protein eL14|Pyrobaculum islandicum (strain DSM

Query: 2 HVEPADKE 9
H+EP DK+
Sbjct: 54 HIEPTDKK 61


>sp|RL14E_PYRAE|LARGE ribosomal subunit protein eL14|Pyrobaculum aerophilum (strain

Query: 2 HVEPADKE 9
H+EP DK+
Sbjct: 54 HIEPTDKK 61


>sp|RL14E_PYRCJ|LARGE ribosomal subunit protein eL14|Pyrobaculum calidifontis (strain

Query: 2 HVEPADKE 9
H+EP DK+
Sbjct: 54 HIEPTDKK 61


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LHVEPADK 8
+HV+P D+
Sbjct: 349 MHVKPGDR 356


>sp|RL14E_STAMF|LARGE ribosomal subunit protein eL14|Staphylothermus marinus (strain

Query: 2 HVEPADK 8
H+EP DK
Sbjct: 53 HIEPLDK 59


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 1 LHVEPADKE 9
+H+EP DK+
Sbjct: 215 VHLEPYDKD 223


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LHVEPADKEE 10
+HVE KEE
Sbjct: 392 IHVEKVKKEE 401


>sp|RL14E_DESA1|LARGE ribosomal subunit protein eL14|Desulfurococcus amylolyticus

Query: 2 HVEPADKE 9
H+EP DK
Sbjct: 53 HLEPTDKS 60


>sp|RL14E_METS5|LARGE ribosomal subunit protein eL14|Metallosphaera sedula (strain ATCC

Query: 2 HVEPADK 8
H+EP DK
Sbjct: 53 HLEPTDK 59


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 HVEPADK 8
VEPADK
Sbjct: 318 RVEPADK 324


>sp|RL14E_METM5|LARGE ribosomal subunit protein eL14|Methanococcus maripaludis (strain

Query: 2 HVEPADKE 9
H EP DK+
Sbjct: 48 HFEPTDKK 55


>sp|AROC_AERPE|CHORISMATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VEPADKEE 10
VEP D EE
Sbjct: 167 VEPRDSEE 174




97|SequenceR|490|481|LFHFLLHVEP

>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 FHFLLHVEP 10
FH H+EP
Sbjct: 52 FHLKQHIEP 60


>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 3 HFLLHVEP 10
HFL +EP
Sbjct: 456 HFLAELEP 463




98|SequenceR|495|486|ATLVQLFHFL

>sp|RL10E_NANEQ|LARGE ribosomal subunit protein uL16|Nanoarchaeum equitans (strain

Query: 2 TLVQLFH 8
T+V+LFH
Sbjct: 35 TMVRLFH 41




99|SequenceR|500|491|FSGFCATLVQ

>sp|PELO_PICTO|PROTEIN pelota homolog|Picrophilus torridus (strain ATCC 700027

Query: 1 FSGFCATL 8
F G+CA L
Sbjct: 327 FGGYCAIL 334




100|SequenceR|505|496|NGGHAFSGFC

>sp|TRUA_METLZ|TRNA pseudouridine synthase A|Methanocorpusculum labreanum (strain ATCC

Query: 2 GGHAFSGF 9
G H FSGF
Sbjct: 132 GTHNFSGF 139


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GHAFSGFC 10
GHA+ FC
Sbjct: 195 GHAYVCFC 202


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGGHAFSGFC 10
N GH + G C
Sbjct: 86 NNGHDYHGSC 95


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 HAFSGFC 10
HA GFC
Sbjct: 289 HAHGGFC 295


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 GGHAFSG 8
GG+AF+G
Sbjct: 960 GGYAFTG 966


>sp|SUA5_SULTO|THREONYLCARBAMOYL-AMP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NGGHAFSG 8
+GGH F G
Sbjct: 172 DGGHTFFG 179


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 3 GHAFSG 8
GH FSG
Sbjct: 82 GHGFSG 87


>sp|PSB_HALSA|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 700922

Query: 1 NGGHAFS 7
+GGH FS
Sbjct: 154 DGGHVFS 160


>sp|PSB_HALS3|PROTEASOME subunit beta|Halobacterium salinarum (strain ATCC 29341

Query: 1 NGGHAFS 7
+GGH FS
Sbjct: 154 DGGHVFS 160




101|SequenceR|510|501|ANSVDNGGHA

>sp|Y1471_METMP|UNCHARACTERIZED protein MMP1471|Methanococcus maripaludis (strain DSM 14266

Query: 2 NSVDNGGH 9
NS++NG H
Sbjct: 153 NSINNGNH 160


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVDNGGH 9
S+D GGH
Sbjct: 723 SLDGGGH 729


>sp|TPIS_METTH|TRIOSEPHOSPHATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 NSVDNGGH 9
++VD GGH
Sbjct: 72 DAVDAGGH 79




102|SequenceR|515|506|VLPGIANSVD

>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VLPGIANSVD 10
VLP +AN +D
Sbjct: 87 VLPAVANDLD 96


>sp|YFUS_PYRWO|UNCHARACTERIZED 12.3 kDa protein in|Pyrococcus woesei

Query: 1 VLPGIANSV 9
+LPG+ NS+
Sbjct: 91 ILPGLCNSI 99


>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VLPGIANS 8
V+PG+AN+
Sbjct: 55 VMPGLANT 62


>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPGIANSVD 10
LPG N+VD
Sbjct: 320 LPGTKNTVD 328


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPGIANSVD 10
LPG N+VD
Sbjct: 320 LPGTKNTVD 328


>sp|UPPP_METVS|UNDECAPRENYL-DIPHOSPHATASE vannielii (strain ATCC 35089

Query: 1 VLPGIANS 8
VLPGI+ S
Sbjct: 151 VLPGISRS 158


>sp|COBQ_METMJ|PROBABLE cobyric acid synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VLPGIANSVD 10
+LPG N+V+
Sbjct: 290 ILPGTKNTVE 299


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 1 VLPGIANSV 9
+ P IANS+
Sbjct: 19 ITPAIANSI 27


>sp|OMP1_IGNH4|MAJOR outer membrane protein 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LPGIANSVD 10
LPG+ SVD
Sbjct: 62 LPGLKASVD 70


>sp|UPPP_METM7|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C7 /

Query: 1 VLPGIANS 8
VLPGI+ S
Sbjct: 151 VLPGISRS 158


>sp|UPPP_METMP|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain DSM 14266

Query: 1 VLPGIANS 8
VLPGI+ S
Sbjct: 151 VLPGISRS 158


>sp|UPPP_METM6|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C6 /

Query: 1 VLPGIANS 8
VLPGI+ S
Sbjct: 151 VLPGISRS 158


>sp|UPPP_METM5|UNDECAPRENYL-DIPHOSPHATASE maripaludis (strain C5 /

Query: 1 VLPGIANS 8
VLPGI+ S
Sbjct: 151 VLPGISRS 158


>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PGIANSVD 10
P IANS+D
Sbjct: 36 PVIANSID 43




103|SequenceR|520|511|ILWLAVLPGI

>sp|DNLI_METMJ|DNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LWLAVLPGI 10
LW+ V PG+
Sbjct: 408 LWVKVKPGV 416


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 ILWLAVLPGI 10
++W+ V PG+
Sbjct: 277 LMWVDVAPGV 286


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 WLAVLPG 9
WL V+PG
Sbjct: 421 WLGVVPG 427


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 LWLAVLPG 9
LWL + PG
Sbjct: 276 LWLPIKPG 283


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 ILWLAVLPGI 10
++W+ V PG+
Sbjct: 277 LMWVEVPPGV 286


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILWLAVLPG 9
I WL V PG
Sbjct: 256 IHWLKVYPG 264


>sp|CYSC_AERPE|PROBABLE adenylyl-sulfate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ILWLAVLPG 9
++WL LPG
Sbjct: 12 VVWLTGLPG 20


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LWLAVLPG 9
+WLA PG
Sbjct: 222 IWLASTPG 229


>sp|RL3_METMP|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain DSM

Query: 1 ILWLAVLPG 9
++W LPG
Sbjct: 242 VMWTVPLPG 250


>sp|RL3_METM5|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C5

Query: 1 ILWLAVLPG 9
++W LPG
Sbjct: 242 VMWTVPLPG 250


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 1 ILWLAVLPG 9
++W LPG
Sbjct: 242 VMWTVPLPG 250


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 1 ILWLAVLPG 9
++W LPG
Sbjct: 242 VMWTVPLPG 250


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILWLAVLPG 9
I+W+ + PG
Sbjct: 371 IVWVPIRPG 379


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILWLAVL 7
+LW+A+L
Sbjct: 417 LLWMAIL 423


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILWLAVLPGI 10
I WL +LP I
Sbjct: 241 IPWLRILPYI 250




104|SequenceR|525|516|GGQKYILWLA

>sp|RRP42_PYRAE|EXOSOME complex component Rrp42|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GGQKYILWL 9
GG+ Y+LW+
Sbjct: 134 GGKAYVLWI 142


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GQKYILW 8
G KYILW
Sbjct: 262 GDKYILW 268


>sp|PGK2_METM7|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C7 /

Query: 2 GQKYILW 8
G+KY+LW
Sbjct: 81 GEKYLLW 87


>sp|PGK2_METM6|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C6 /

Query: 2 GQKYILW 8
G+KY+LW
Sbjct: 81 GEKYLLW 87


>sp|PGK2_METM5|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain C5 /

Query: 2 GQKYILW 8
G+KY+LW
Sbjct: 81 GEKYLLW 87


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GQKYILW 8
G KY+LW
Sbjct: 273 GDKYVLW 279


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GQKYILW 8
G KYI+W
Sbjct: 278 GNKYIVW 284


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGQKYI 6
GGQKYI
Sbjct: 187 GGQKYI 192


>sp|SYE_CALMQ|GLUTAMATE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 GQKYILW 8
G KYI+W
Sbjct: 290 GDKYIVW 296


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GQKYILW 8
G KYI+W
Sbjct: 280 GDKYIVW 286


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GQKYILWLA 10
G+K ILW+A
Sbjct: 250 GKKEILWIA 258


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GQKYILW 8
G KYI+W
Sbjct: 280 GDKYIVW 286


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GQKYILW 8
G KYI+W
Sbjct: 280 GDKYIVW 286


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GQKYILW 8
G KYI+W
Sbjct: 280 GDKYIVW 286


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GQKYILW 8
G KY++W
Sbjct: 278 GNKYVVW 284


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GQKYILW 8
G KY++W
Sbjct: 278 GNKYVVW 284


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KYILWLA 10
KY +WLA
Sbjct: 219 KYAIWLA 225


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GQKYILWL 9
G K+ LWL
Sbjct: 159 GMKFALWL 166


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 2 GQKYILWL 9
G K+ LWL
Sbjct: 159 GMKFALWL 166


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GQKYILW 8
+KY+LW
Sbjct: 81 AEKYLLW 87


>sp|PGK2_METMP|2-PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GQKYILW 8
+KY+LW
Sbjct: 80 AEKYLLW 86


>sp|Y457_METJA|UNCHARACTERIZED metallohydrolase MJ0457|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GQKYILWL 9
G+K ILW+
Sbjct: 196 GEKGILWI 203


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GQKYILW 8
G+KY +W
Sbjct: 336 GEKYYIW 342


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GQKYILW 8
G+KY +W
Sbjct: 336 GEKYYIW 342


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GQKYILW 8
+KY+LW
Sbjct: 76 AEKYMLW 82


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain

Query: 1 GGQKYILW 8
GG+ Y+ W
Sbjct: 47 GGRDYMYW 54


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GQKYILW 8
G KY++W
Sbjct: 278 GTKYMVW 284


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GQKYILW 8
+KY+LW
Sbjct: 78 AKKYLLW 84


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 QKYILWL 9
++Y++WL
Sbjct: 679 EQYVMWL 685


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GGQKYIL 7
GG+KYI+
Sbjct: 265 GGRKYIV 271


>sp|CREN7_PYRAR|CHROMATIN protein Cren7|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GGQKYIL 7
GG++YIL
Sbjct: 15 GGKRYIL 21




105|SequenceR|530|521|AEQTVGGQKY

>sp|RL4_HALSA|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 3 QTVGGQK 9
QTVGG+K
Sbjct: 82 QTVGGRK 88


>sp|RL4_HALS3|LARGE ribosomal subunit protein uL4|Halobacterium salinarum (strain

Query: 3 QTVGGQK 9
QTVGG+K
Sbjct: 82 QTVGGRK 88


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AEQTVGGQ 8
AE+T+GG+
Sbjct: 407 AEKTLGGE 414




106|SequenceR|535|526|WVPTAAEQTV

>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 3 PTAAEQTV 10
PT EQTV
Sbjct: 215 PTEVEQTV 222


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PTAAEQTV 10
PT EQTV
Sbjct: 215 PTEVEQTV 222




107|SequenceR|540|531|GYFLLWVPTA

>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 3 FLLWVPTA 10
F++W PTA
Sbjct: 332 FIIWHPTA 339


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YFLLWVP 8
YF +W P
Sbjct: 418 YFFVWAP 424


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 2 YFLLWVPT 9
+FL W PT
Sbjct: 756 WFLKWSPT 763


>sp|Y1068_METJA|UNCHARACTERIZED membrane protein MJ1068|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GYFLLWV 7
GYF++W+
Sbjct: 418 GYFIMWI 424


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YFLLWVP 8
YF +W P
Sbjct: 406 YFFIWGP 412


>sp|TTRB_ARCFU|TETRATHIONATE reductase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYFLLWV 7
GYF WV
Sbjct: 62 GYFRTWV 68


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 FLLWVPTA 10
F++W P+A
Sbjct: 134 FVVWAPSA 141


>sp|TOP6B_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 2 YFLLWVP 8
YF+ W P
Sbjct: 759 YFVKWTP 765


>sp|TOP6B_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 2 YFLLWVP 8
YF+ W P
Sbjct: 759 YFVKWTP 765


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GYFLLWVPT 9
G+++L +PT
Sbjct: 620 GFYILGIPT 628


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GYFLLWVPT 9
G+++L +PT
Sbjct: 618 GFYILGIPT 626


>sp|SYR_PYRAE|ARGININE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GYFLLWVPT 9
G+++L +PT
Sbjct: 618 GFYILGIPT 626


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YFLLWVPT 9
YF++W T
Sbjct: 222 YFVIWTTT 229


>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 4 LLWVPTA 10
+LW PTA
Sbjct: 341 ILWHPTA 347


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 1 GYFLLWVPTA 10
YFLL PTA
Sbjct: 106 AYFLLNAPTA 115


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GYFLLWV 7
GYF+ W+
Sbjct: 181 GYFIKWL 187




108|SequenceR|545|536|CIGVGGYFLL

>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGVGGY 7
IGVGGY
Sbjct: 512 IGVGGY 517


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 GVGGYFLL 10
G+GG+F++
Sbjct: 274 GIGGFFII 281


>sp|FLAB1_METJA|FLAGELLIN B1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CIGVGGYF 8
CIGV G++
Sbjct: 64 CIGVTGHY 71


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GGYFLL 10
GGYFL+
Sbjct: 43 GGYFLI 48


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 3 GVGGYF 8
G GGYF
Sbjct: 63 GAGGYF 68


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 1 CIGVGG 6
C+G+GG
Sbjct: 180 CVGIGG 185


>sp|SUCD_METTH|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanothermobacter

Query: 1 CIGVGG 6
C+G+GG
Sbjct: 178 CVGIGG 183


>sp|PANB_SULTO|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SULAC|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 203 CIGAGPY 209


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 202 CIGAGPY 208


>sp|PANB_CALMQ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 CIGVGGY 7
CIG G Y
Sbjct: 203 CIGAGPY 209


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGVGGYFL 9
IGVGG+ L
Sbjct: 252 IGVGGHCL 259


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 2 IGVGGYF 8
IGVGG F
Sbjct: 227 IGVGGVF 233


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGVGGY 7
+G+GGY
Sbjct: 145 LGIGGY 150


>sp|FLUC_METJA|FLUORIDE-SPECIFIC ion channel FluC|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGVGGYF 8
IGVGG+F
Sbjct: 8 IGVGGFF 14


>sp|Y2120_ARCFU|UNCHARACTERIZED protein AF_2120|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CIGVGGY 7
CI GGY
Sbjct: 109 CIQTGGY 115




109|SequenceR|550|541|VWLGTCIGVG

>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WLGTCIGVG 10
W G CI VG
Sbjct: 380 WDGACIAVG 388


>sp|RL11_METVS|LARGE ribosomal subunit protein uL11|Methanococcus vannielii (strain ATCC

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 127 IGTCVSVG 134


>sp|RL11_METM7|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain C7

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 127 IGTCVSVG 134


>sp|RL11_METM6|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain C6

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 127 IGTCVSVG 134


>sp|RL11_METM5|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain C5

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 127 IGTCVSVG 134


>sp|RL11_METMJ|LARGE ribosomal subunit protein uL11|Methanoculleus marisnigri (strain

Query: 3 LGTCIGVG 10
LGTC+ VG
Sbjct: 125 LGTCVSVG 132


>sp|CHED_HALMA|PROBABLE chemoreceptor glutamine deamidase CheD|Haloarcula marismortui

Query: 3 LGTCIGVG 10
LG+CIG+
Sbjct: 41 LGSCIGIA 48


>sp|RL11_THEVO|LARGE ribosomal subunit protein uL11|Thermoplasma volcanium (strain ATCC

Query: 3 LGTCIGVG 10
LGTC+ +G
Sbjct: 127 LGTCVAMG 134


>sp|RL11_METMP|LARGE ribosomal subunit protein uL11|Methanococcus maripaludis (strain

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 127 VGTCVSVG 134


>sp|RL11_METPE|LARGE ribosomal subunit protein uL11|Methanosphaerula palustris (strain

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 125 IGTCVSVG 132


>sp|RL11_THEAC|LARGE ribosomal subunit protein uL11|Thermoplasma acidophilum (strain

Query: 3 LGTCIGVG 10
LGTC+ +G
Sbjct: 127 LGTCVSMG 134


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain

Query: 1 VWLGTCIG 8
+WLG C G
Sbjct: 10 MWLGGCSG 17


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 VWLGTCIG 8
+WLG C G
Sbjct: 10 MWLGGCSG 17


>sp|CHED2_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 3 LGTCIGV 9
LG+CIGV
Sbjct: 90 LGSCIGV 96


>sp|CHED1_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei

Query: 3 LGTCIGV 9
LG+CIGV
Sbjct: 90 LGSCIGV 96


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VWLGTCIGVG 10
+W T +GVG
Sbjct: 333 IWHPTAVGVG 342


>sp|RL11_METLZ|LARGE ribosomal subunit protein uL11|Methanocorpusculum labreanum (strain

Query: 3 LGTCIGVG 10
+GTC+ VG
Sbjct: 125 MGTCVSVG 132


>sp|PRNK_PYRFU|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PF0112|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GTCIGVG 10
G C+GVG
Sbjct: 299 GLCLGVG 305


>sp|RL11_METTH|LARGE ribosomal subunit protein uL11|Methanothermobacter

Query: 3 LGTCIGVG 10
+GTC+ +G
Sbjct: 127 MGTCVSMG 134


>sp|RL11_METS3|LARGE ribosomal subunit protein uL11|Methanobrevibacter smithii (strain

Query: 3 LGTCIGVG 10
+GTC+ +G
Sbjct: 127 MGTCVSMG 134


>sp|PTH_THEAC|PEPTIDYL-TRNA hydrolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 TCIGVG 10
TCIG+G
Sbjct: 95 TCIGLG 100


>sp|RL11_METST|LARGE ribosomal subunit protein uL11|Methanosphaera stadtmanae (strain

Query: 3 LGTCIGVG 10
+GTC+ +G
Sbjct: 127 IGTCVSMG 134


>sp|Y1233_METJA|UNCHARACTERIZED protein MJ1233|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LGTCIGVG 10
L TC+G+G
Sbjct: 139 LDTCMGLG 146


>sp|PTH_SULTO|PEPTIDYL-TRNA hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 TCIGVG 10
TCIG+G
Sbjct: 99 TCIGIG 104


>sp|CHED1_METAC|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina acetivorans

Query: 3 LGTCIGV 9
LG+C+GV
Sbjct: 28 LGSCVGV 34


>sp|PTH_THEVO|PEPTIDYL-TRNA hydrolase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 TCIGVG 10
TCIG+G
Sbjct: 95 TCIGLG 100


>sp|IF2B_SULAC|TRANSLATION initiation factor 2 subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VWLGTCIGVG 10
VW+ +C+ G
Sbjct: 124 VWIISCLACG 133


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WLGTCIG 8
W+ +C+G
Sbjct: 230 WMRSCVG 236


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LGTCIGVG 10
L C+GVG
Sbjct: 51 LKNCVGVG 58


>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 4 GTCIGVG 10
G C+GVG
Sbjct: 296 GLCMGVG 302


>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WLGTCIGVG 10
W CIG G
Sbjct: 127 WRYVCIGCG 135


>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 2 WLGTCIGVG 10
W CIG G
Sbjct: 125 WQYVCIGCG 133


>sp|PTH_METTH|PEPTIDYL-TRNA hydrolase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 90 TCLGIG 95


>sp|PTH_METKA|PEPTIDYL-TRNA hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 93 TCLGIG 98


>sp|RL11_METB6|LARGE ribosomal subunit protein uL11|Methanoregula boonei (strain DSM

Query: 3 LGTCIGVG 10
+GTC+ +G
Sbjct: 125 VGTCVSMG 132


>sp|RL11_META3|LARGE ribosomal subunit protein uL11|Methanococcus aeolicus (strain ATCC

Query: 3 LGTCIGVG 10
+GTC+ G
Sbjct: 127 IGTCVSTG 134


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 3 LGTCIGVG 10
+ TC+G+G
Sbjct: 177 VSTCVGIG 184


>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 4 GTCIGVG 10
G CIG+G
Sbjct: 299 GFCIGLG 305


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GTCIGV 9
GTC+GV
Sbjct: 153 GTCLGV 158


>sp|PDXT_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosphaera stadtmanae

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 79 LGTCAGL 85


>sp|PDXT_METBF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina barkeri (strain

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 81 LGTCAGL 87


>sp|PDXT_METVS|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus vannielii

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 73 LGTCAGM 79


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 73 LGTCAGM 79


>sp|PDXT_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 73 LGTCAGM 79


>sp|PDXT_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanopyrus kandleri (strain

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 81 LGTCAGM 87


>sp|PDXT_METJA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocaldococcus jannaschii

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 72 LGTCAGM 78


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus (strain

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 72 LGTCAGM 78


>sp|CHED_THEKO|PROBABLE chemoreceptor glutamine deamidase CheD|Thermococcus kodakarensis

Query: 3 LGTCIGV 9
LG+C+G+
Sbjct: 24 LGSCVGI 30


>sp|CHED_ARCFU|PROBABLE chemoreceptor glutamine deamidase CheD|Archaeoglobus fulgidus

Query: 1 VWLGTCIGVG 10
+ LG+C+G+
Sbjct: 23 IGLGSCVGIA 32


>sp|CHED2_METMA|PROBABLE chemoreceptor glutamine deamidase CheD|Methanosarcina mazei

Query: 3 LGTCIGV 9
LG+C+G+
Sbjct: 28 LGSCLGI 34


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 WLGTCIGVG 10
W TC G G
Sbjct: 906 WGSTCHGAG 914


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 73 LGTCAGM 79


>sp|CHED_METHJ|PROBABLE chemoreceptor glutamine deamidase CheD|Methanospirillum hungatei

Query: 1 VWLGTCIGV 9
+ LG+CIG+
Sbjct: 31 IGLGSCIGL 39


>sp|PDXT_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 LGTCIGV 9
LGTC G+
Sbjct: 73 LGTCAGM 79


>sp|CHED_PYRHO|PROBABLE chemoreceptor glutamine deamidase CheD|Pyrococcus horikoshii

Query: 3 LGTCIGV 9
LG+C+G+
Sbjct: 25 LGSCVGI 31


>sp|RL11_METHJ|LARGE ribosomal subunit protein uL11|Methanospirillum hungatei JF-1

Query: 3 LGTCIGVG 10
+GTC+ +G
Sbjct: 125 VGTCVSLG 132


>sp|SUCD_METTH|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanothermobacter

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 177 TCVGIG 182


>sp|CHED_PYRAB|PROBABLE chemoreceptor glutamine deamidase CheD|Pyrococcus abyssi (strain

Query: 3 LGTCIGV 9
LG+C+G+
Sbjct: 26 LGSCVGI 32


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GTCIGV 9
GTC+G+
Sbjct: 153 GTCLGI 158


>sp|PTH_SACI7|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 98 TCLGIG 103


>sp|PTH_SACI6|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 98 TCLGIG 103


>sp|PTH_SACI4|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 98 TCLGIG 103


>sp|PTH_SACI3|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 98 TCLGIG 103


>sp|PTH_SACI2|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 98 TCLGIG 103


>sp|PTH_SACI1|PEPTIDYL-TRNA hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 TCIGVG 10
TC+G+G
Sbjct: 98 TCLGIG 103


>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GTCIGVG 10
G C+GVG
Sbjct: 85 GFCLGVG 91




110|SequenceR|555|546|VRRGWVWLGT

>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 418 RGWLWI 423


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 418 RGWLWI 423


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 432 RGWLWI 437


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 431 RGWLWI 436


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 427 RGWLWI 432


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 418 RGWLWI 423


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 428 RGWLWI 433


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 426 RGWLWI 431


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 432 RGWLWI 437


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 428 RGWLWI 433


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 432 RGWLWI 437


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VRRGWVWLG 9
V+RGW LG
Sbjct: 33 VKRGWTTLG 41


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RGWVWL 8
RGW+W+
Sbjct: 435 RGWLWI 440


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RRGWVWL 8
+R W+WL
Sbjct: 419 KRSWLWL 425


>sp|TRPF_METKA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanopyrus kandleri (strain AV19 /

Query: 2 RRGWVWLG 9
+RG VWLG
Sbjct: 107 QRGSVWLG 114


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 RRGWVW 7
RRG+VW
Sbjct: 17 RRGFVW 22


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 RGWVWL 8
RGW W+
Sbjct: 419 RGWSWI 424


>sp|DNLI1_METBF|DNA ligase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 RRGWVWL 8
+R W WL
Sbjct: 386 KRSWFWL 392


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VRRGWVW 7
+RRG++W
Sbjct: 11 IRRGFLW 17


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RRGWVWLGT 10
+ GW+W+ +
Sbjct: 185 QNGWIWISS 193


>sp|DNLI_PYRIL|DNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 RGWVWL 8
RGW W+
Sbjct: 416 RGWNWI 421


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RGWVWL 8
RGW W+
Sbjct: 416 RGWNWI 421


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 RGWVWL 8
RGW W+
Sbjct: 416 RGWNWI 421


>sp|DNLI_PYRNV|DNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 RGWVWL 8
RGW W+
Sbjct: 416 RGWNWI 421


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GWVW 7
GWVW
Sbjct: 23 GWVW 26


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 RGWVWL 8
RGW W+
Sbjct: 416 RGWNWI 421


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RGWVWLGT 10
RG+ WL T
Sbjct: 873 RGYAWLAT 880


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RRGWVW 7
RRG++W
Sbjct: 15 RRGYLW 20


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 4 GWVWLGT 10
GW WL T
Sbjct: 272 GWDWLET 278


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 GWVWLGT 10
GW WL T
Sbjct: 272 GWDWLET 278


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WVWLGT 10
W W+GT
Sbjct: 2508 WDWIGT 2513


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 4 GWVWLG 9
GWVW+G
Sbjct: 388 GWVWIG 393


>sp|SYS2_METTP|TYPE-2 serine--tRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RRGWVWL 8
+RGW W+
Sbjct: 136 KRGWTWM 142


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GWVW 7
GWVW
Sbjct: 25 GWVW 28


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VRRGWVWLG 9
V+RGW +G
Sbjct: 32 VKRGWPTVG 40


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 VRRGW 5
VRRGW
Sbjct: 310 VRRGW 314


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 VRRGWVW 7
V + W+W
Sbjct: 393 VSKAWIW 399


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 2 RRGWVWL 8
+ GW+W+
Sbjct: 185 QNGWIWV 191


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 1 VRRGWV 6
+RRGW+
Sbjct: 86 LRRGWI 91


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 RGWVWL 8
RG+VW+
Sbjct: 202 RGYVWI 207


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 1 VRRGWVWLGT 10
V+ WV LGT
Sbjct: 278 VQASWVKLGT 287


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 4 GWVWLG 9
GW WL
Sbjct: 283 GWEWLA 288


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 GWVWL 8
GW WL
Sbjct: 271 GWEWL 275


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GWVWL 8
GW WL
Sbjct: 271 GWEWL 275


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 GWVWL 8
GW WL
Sbjct: 271 GWEWL 275


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 4 GWVWL 8
GW WL
Sbjct: 271 GWEWL 275


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 4 GWVWL 8
GW WL
Sbjct: 272 GWEWL 276


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 4 GWVWL 8
GW WL
Sbjct: 271 GWEWL 275


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 GWVWL 8
GW WL
Sbjct: 284 GWEWL 288


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 6 VWLGT 10
VWLGT
Sbjct: 319 VWLGT 323


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7 /

Query: 1 VRRGWVWLGT 10
++ WV LGT
Sbjct: 288 IQTSWVKLGT 297


>sp|COFH_METM6|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C6 /

Query: 1 VRRGWVWLGT 10
++ WV LGT
Sbjct: 288 IQTSWVKLGT 297


>sp|COFH_METM5|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C5 /

Query: 1 VRRGWVWLGT 10
++ WV LGT
Sbjct: 288 IQTSWVKLGT 297


>sp|COFH1_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanococcus maripaludis (strain DSM

Query: 1 VRRGWVWLGT 10
++ WV LGT
Sbjct: 288 IQTSWVKLGT 297


>sp|BIOY_PYRHO|PROBABLE biotin transporter BioY|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GWVWLG 9
GW+WL
Sbjct: 119 GWMWLA 124


>sp|Y1496_PYRFU|UPF0252 protein PF1496|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RRGWVWL 8
RR W+W+
Sbjct: 332 RREWLWI 338


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 2 RRGWV 6
RRGW+
Sbjct: 41 RRGWI 45




111|SequenceR|560|551|GMTQIVRRGW

>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 IVRRGW 10
IVR+GW
Sbjct: 193 IVRKGW 198


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GMTQIVRRGW 10
+TQ + RGW
Sbjct: 67 AVTQQLERGW 76


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 1 GMTQIVRRG 9
GM ++ RRG
Sbjct: 341 GMVELARRG 349


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 609 EIVRRDW 615


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 610 EIVRRDW 616


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 610 EIVRRDW 616


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 610 EIVRRDW 616


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 609 EIVRRDW 615


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 609 EIVRRDW 615


>sp|IDI2_ARCFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GMTQIVRRG 9
GM Q++ RG
Sbjct: 124 GMPQVIERG 132


>sp|QUEC_METBF|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GMTQIVRRG 9
G T+IVRR
Sbjct: 174 GKTEIVRRA 182


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 609 EIVRRDW 615


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 1506 EIVRRDW 1512


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 609 EIVRRDW 615


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 1147 EIVRRDW 1153


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 1070 EIVRRDW 1076


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 1533 EIVRRDW 1539


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 1358 EIVRRDW 1364


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 4 QIVRRGW 10
+IVRR W
Sbjct: 1502 EIVRRDW 1508


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GMTQIVRRGW 10
G+T I GW
Sbjct: 463 GITDIKENGW 472




112|SequenceR|565|556|PTLDKGMTQI

>sp|BIOF_METVS|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus vannielii (strain

Query: 1 PTLDKGMTQI 10
PT+ KGM +I
Sbjct: 336 PTVKKGMERI 345


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PTLDKGMTQI 10
PT+D+G +I
Sbjct: 438 PTIDRGTRRI 447


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 1 PTLDKGMTQI 10
PT+ KGM ++
Sbjct: 341 PTVPKGMERL 350


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 1 PTLDKGMTQI 10
PTL KG+ ++
Sbjct: 303 PTLSKGLEEM 312


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM

Query: 1 PTLDKGMT 8
P LDKG++
Sbjct: 36 PALDKGIS 43




113|SequenceR|570|561|SSPTIPTLDK

>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 3 PTIPTLDK 10
PT+P LD+
Sbjct: 538 PTLPYLDE 545


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 PTIPTL 8
PT+PTL
Sbjct: 360 PTLPTL 365


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 4 TIPTLD 9
T+PTLD
Sbjct: 299 TVPTLD 304




114|SequenceR|575|566|EITFGSSPTI

>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EITFGSSPTI 10
EITF +P+I
Sbjct: 32 EITFDDTPSI 41


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EITFGSSPT 9
EITF + PT
Sbjct: 188 EITFDTDPT 196


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EITFGSSPT 9
EITF + PT
Sbjct: 188 EITFDTDPT 196


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 EITFGSSPT 9
EITF + PT
Sbjct: 188 EITFDTDPT 196


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 EITFGSSPTI 10
E+ FGS P +
Sbjct: 92 ELNFGSKPVL 101


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ITFGSSP 8
IT+GSSP
Sbjct: 316 ITYGSSP 322


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EITFGSSPTI 10
+IT GS+PT+
Sbjct: 441 QITVGSTPTL 450


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ITFGSSP 8
IT+GSSP
Sbjct: 317 ITYGSSP 323


>sp|AMPPA_METBF|AMP phosphorylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ITFGSSP 8
IT+GSSP
Sbjct: 316 ITYGSSP 322


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EITFGSSPT 9
EITF PT
Sbjct: 188 EITFDKDPT 196


>sp|AMPPA_METLZ|AMP phosphorylase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ITFGSSP 8
+TFG SP
Sbjct: 318 VTFGGSP 324


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ITFGSSPT 9
I FG+SPT
Sbjct: 308 IRFGASPT 315


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ITFGSSPT 9
+ FG+SPT
Sbjct: 309 VRFGASPT 316


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 2 ITFGSSPT 9
+ FGS PT
Sbjct: 610 LNFGSEPT 617




115|SequenceR|580|571|FASALEITFG

>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FASALEI 7
FASALE+
Sbjct: 440 FASALEV 446


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 FASALEITF 9
FAS L IT+
Sbjct: 94 FASVLHITY 102




116|SequenceR|585|576|AIVVTFASAL

***** No hits found ******


117|SequenceR|590|581|LGINSAIVVT

>sp|THYX_SULTO|FLAVIN-DEPENDENT thymidylate synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GINSAIVVT 10
G+N+ IVVT
Sbjct: 147 GVNTNIVVT 155


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GINSAIVVT 10
G+N+ IVVT
Sbjct: 147 GVNTNIVVT 155


>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GINSAIVVT 10
G+N+ IVVT
Sbjct: 148 GVNTNIVVT 156


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 LGINSAIV 8
LGI+SA+V
Sbjct: 402 LGISSAVV 409


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGINSAIVVT 10
LGIN + +VT
Sbjct: 352 LGINVSYIVT 361




118|SequenceR|595|586|TTSVPLGINS

>sp|Y1115_METJA|UNCHARACTERIZED protein MJ1115|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVPLGIN 9
S+PLGIN
Sbjct: 85 SLPLGIN 91


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 3 SVPLGIN 9
+VPLGIN
Sbjct: 125 TVPLGIN 131


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SVPLGINS 10
S+PLGIN+
Sbjct: 86 SLPLGINA 93


>sp|Y2179_THEKO|UNCHARACTERIZED protein TK2179|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SVPLGIN 9
S+PLG+N
Sbjct: 83 SLPLGVN 89


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 TSVPLGI 8
TSVP+GI
Sbjct: 92 TSVPVGI 98


>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 3 SVPLGIN 9
S+P+GIN
Sbjct: 83 SIPIGIN 89


>sp|BSUHB_THEKO|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 4 VPLGIN 9
VPLG+N
Sbjct: 58 VPLGVN 63


>sp|RL11_METMA|LARGE ribosomal subunit protein uL11|Methanosarcina mazei (strain ATCC

Query: 2 TSVPLGIN 9
T VP+G+N
Sbjct: 127 TCVPMGVN 134




119|SequenceR|600|591|GVKCHTTSVP

>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 1 GVKCHTTSVP 10
G++C+ TS P
Sbjct: 6 GIECYITSTP 15


>sp|TTDA_METJA|PUTATIVE L(+)-tartrate dehydratase subunit alpha|Methanocaldococcus

Query: 4 CHTTSVP 10
CHT S+P
Sbjct: 256 CHTASLP 262


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KCHTTSV 9
KCHTT +
Sbjct: 711 KCHTTQI 717


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 4 CHTTSVP 10
CHT S+P
Sbjct: 516 CHTLSIP 522


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 4 CHTTSVP 10
C+TT++P
Sbjct: 34 CNTTTIP 40


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 GVKCHTTSVP 10
G+K TS+P
Sbjct: 313 GIKVEDTSIP 322


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVKCHTTSVP 10
GV+ T+S+P
Sbjct: 619 GVEIETSSIP 628


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVKCHTTSVP 10
G+ C+ ++P
Sbjct: 547 GINCYNKNIP 556




120|SequenceR|605|596|VAVVSGVKCH

>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AVVSGVKCH 10
A+VSG+K +
Sbjct: 131 AIVSGIKAY 139




121|SequenceR|610|601|SRIWGVAVVS

>sp|Y3536_METJA|UPF0310 protein MJECL36|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RIWGVA 7
+IWGVA
Sbjct: 20 KIWGVA 25


>sp|Y1382_METJA|UPF0310 protein MJ1382|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RIWGVA 7
+IWGVA
Sbjct: 20 KIWGVA 25


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RIWGVA 7
R+WGV+
Sbjct: 32 RVWGVS 37


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 RIWGVA 7
R+WGV+
Sbjct: 32 RVWGVS 37


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RIWGVA 7
R+WGV+
Sbjct: 32 RVWGVS 37


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 RIWGVA 7
R+WGV+
Sbjct: 32 RVWGVS 37


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 SRIWGVAV 8
SR+WG V
Sbjct: 1362 SRVWGAGV 1369


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 2 RIWGVA 7
R+WGV+
Sbjct: 32 RVWGVS 37


>sp|Y1441_METTH|UPF0285 protein MTH_1441|Methanothermobacter thermautotrophicus (strain

Query: 3 IWGVAVVS 10
IWG+A +S
Sbjct: 258 IWGLAGIS 265


>sp|PANE_ARCFU|2-DEHYDROPANTOATE 2-reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RIWGVAVVS 10
RIW AVV+
Sbjct: 174 RIWAKAVVN 182




122|SequenceR|615|606|DVAKRSRIWG

>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 DVAKRSRIWG 10
+V KR+R WG
Sbjct: 279 EVVKRTRNWG 288


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 AKRSRIWG 10
+++SR+WG
Sbjct: 332 SEKSRVWG 339


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVAKRSRIWG 10
DVAK SRI G
Sbjct: 1717 DVAKFSRITG 1726


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain

Query: 2 VAKRSRIW 9
+AKR R+W
Sbjct: 21 IAKRERVW 28


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVAKRSRIW 9
+V KR+R W
Sbjct: 276 EVVKRTRNW 284


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 RSRIWG 10
RSR+WG
Sbjct: 460 RSRVWG 465


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 DVAKRSRIW 9
D+A SR W
Sbjct: 460 DIASNSRQW 468


>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VAKRSRIWG 10
+A++SRI+G
Sbjct: 21 IAEKSRIFG 29




123|SequenceR|620|611|RFLRWDVAKR

>sp|NADK_METKA|NAD kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 RFLRWD 6
+FLRWD
Sbjct: 271 KFLRWD 276


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 1 RFLRWDVAKR 10
RF+RW KR
Sbjct: 566 RFIRWRPDKR 575


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 RFLRWDVAK 9
RF+ DVAK
Sbjct: 263 RFMSMDVAK 271


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RFLRWDVAKR 10
R+LR VAKR
Sbjct: 311 RYLREQVAKR 320


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RFLRWDVAKR 10
R+LR VAKR
Sbjct: 311 RYLREQVAKR 320


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RFLRWDVAKR 10
R+LR VAKR
Sbjct: 311 RYLREQVAKR 320


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WDVAKR 10
W++AKR
Sbjct: 162 WEIAKR 167


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus

Query: 5 WDVAK 9
WDVAK
Sbjct: 11 WDVAK 15


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LRWDVAKR 10
L+W +A+R
Sbjct: 376 LKWPIARR 383


>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 5 WDVAKR 10
W++AKR
Sbjct: 162 WEIAKR 167




124|SequenceR|625|616|AVFINRFLRW

>sp|SPSS1_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanococcoides burtonii (strain DSM 6242

Query: 3 FINRFLR 9
FIN FLR
Sbjct: 363 FINEFLR 369


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 4 INRFLR 9
INRFLR
Sbjct: 280 INRFLR 285


>sp|XERA_SACS2|TYROSINE recombinase XerA|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VFINRFLRW 10
+ + RFL+W
Sbjct: 92 IAVRRFLKW 100


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 NRFLRW 10
NRF+ W
Sbjct: 157 NRFIEW 162




125|SequenceR|630|621|VTVFWAVFIN

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 FWAVFIN 10
FW FIN
Sbjct: 315 FWGTFIN 321


>sp|FLPA_METKA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanopyrus kandleri (strain

Query: 3 VFWAVF 8
V+WA+F
Sbjct: 15 VYWAIF 20


>sp|SRP19_METST|SIGNAL recognition particle 19 kDa|Methanosphaera stadtmanae (strain

Query: 2 TVFWAVFIN 10
T+ W +IN
Sbjct: 3 TIIWPTYIN 11


>sp|FPOJ_METMA|F(420)H(2) dehydrogenase subunit J|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VTVFWAVFI 9
VTVF+A+F+
Sbjct: 22 VTVFFAIFV 30


>sp|PROF3_LOKSG|LOKI profilin-3|Lokiarchaeum sp. (strain GC14_75)

Query: 5 WAVFIN 10
W++FIN
Sbjct: 113 WSIFIN 118




126|SequenceR|635|626|LGAVPVTVFW

>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 LGAVPVTVFW 10
+G +PV FW
Sbjct: 148 MGRLPVKNFW 157


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 LGAVPVTVFW 10
LGA PV W
Sbjct: 195 LGAEPVATNW 204


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LGAVPVTVFW 10
LGA PV W
Sbjct: 188 LGAEPVATNW 197


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 LGAVPVTVFW 10
LGA PV W
Sbjct: 195 LGAEPVATNW 204


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 LGAVPVTVF 9
L +VP+TVF
Sbjct: 334 LISVPITVF 342


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 GAVPVTVFW 10
G+ PV + W
Sbjct: 22 GSTPVIILW 30


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 2 GAVPVT 7
GAVPVT
Sbjct: 55 GAVPVT 60


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM

Query: 1 LGAVPVTVFW 10
LGAV V W
Sbjct: 52 LGAVDPAVLW 61


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 LGAVPVTVFW 10
LGAV V W
Sbjct: 52 LGAVDPAVMW 61


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LGAVPVTVFW 10
L A+P+ V W
Sbjct: 543 LAALPLLVVW 552




127|SequenceR|640|631|VAASFLGAVP

>sp|Y1485_METJA|UNCHARACTERIZED cation transporter MJ1485|Methanocaldococcus jannaschii (strain

Query: 3 ASFLGAVP 10
ASF+GA+P
Sbjct: 86 ASFIGAIP 93


>sp|UPPP_META3|UNDECAPRENYL-DIPHOSPHATASE aeolicus (strain ATCC BAA-1280

Query: 4 SFLGAVP 10
SFLGA+P
Sbjct: 177 SFLGALP 183


>sp|XACI_HALVD|XYLOSE/ARABINOSE import permease protein XacI|Haloferax volcanii (strain ATCC 29605

Query: 1 VAASFLGAVP 10
++A+FL AVP
Sbjct: 280 MSAAFLAAVP 289




128|SequenceR|645|636|MLLAMVAASF

***** No hits found ******


129|SequenceR|652|641|VYPLIGYMLLAM

>sp|RNH2_PICTO|RIBONUCLEASE HII|Picrophilus torridus (strain ATCC 700027

Query: 3 PLIGYMLLAM 12
P+IG M++AM
Sbjct: 13 PVIGPMVMAM 22


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 3 PLIGYMLLAM 12
PLIGYML M
Sbjct: 180 PLIGYMLYMM 189


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYPLIGYMLLA 11
VYP GY+L A
Sbjct: 261 VYPGSGYVLTA 271


>sp|DGGGP_META3|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YPLIGYMLLA 11
+ LIGY+LLA
Sbjct: 36 FGLIGYILLA 45


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VYPLIG 6
VYP+IG
Sbjct: 248 VYPIIG 253




THE END