1|Sequence|1|10|MGNCLKSPTS
>sp|TOP2_IIV3|DNA topoisomerase 2|Invertebrate iridescent virus 3 (IIV-3)
Query: 3 NCLKSP 8
NCLKSP
Sbjct: 374 NCLKSP 379
>sp|R1AB_IBVM|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 GNCLKSP 8
GNC++ P
Sbjct: 4887 GNCIRKP 4893
>sp|R1AB_IBVBC|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 GNCLKSP 8
GNC++ P
Sbjct: 4885 GNCIRKP 4891
>sp|R1AB_IBVB|REPLICASE polyprotein 1ab|Avian infectious bronchitis virus (strain
Query: 2 GNCLKSP 8
GNC++ P
Sbjct: 4885 GNCIRKP 4891
>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)
Query: 1 MGNCLKSP 8
MGNC K P
Sbjct: 1 MGNCNKPP 8
>sp|CAPSD_LVX|COAT protein|Lily virus X
Query: 2 GNCLKSPT 9
GNC +PT
Sbjct: 70 GNCTVAPT 77
2|Sequence|6|15|KSPTSDDISL
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 SPTSDDI 8
SPTSDD+
Sbjct: 259 SPTSDDM 265
>sp|POL2_RCMV|RNA2 polyprotein|Red clover mottle virus (RCMV)
Query: 3 PTSDDIS 9
PTSD+IS
Sbjct: 327 PTSDEIS 333
3|Sequence|11|20|DDISLLHESQ
>sp|POLG_MCFA|GENOME polyprotein|Mosquito cell fusing agent (CFA
Query: 1 DDISLLHESQ 10
DDI LH+ Q
Sbjct: 3274 DDIPYLHKKQ 3283
>sp|Y082_OSHVF|UNCHARACTERIZED protein ORF82|Ostreid herpesvirus 1 (isolate France)
Query: 1 DDISLLHE 8
DD+ LLHE
Sbjct: 118 DDMILLHE 125
>sp|VG30_BPMD2|GENE 30 protein|Mycobacterium phage D29 (Mycobacteriophage D29)
Query: 1 DDISLLHES 9
+DI LLHE+
Sbjct: 63 EDIRLLHEA 71
>sp|P14_ASFK5|PROTEIN p14.5|African swine fever virus (isolate
Query: 1 DDISLLHESQ 10
DDI+ LH+++
Sbjct: 71 DDINFLHDTR 80
4|Sequence|16|25|LHESQSDRAS
>sp|LTP_ALHV1|LARGE tegument protein deneddylase|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 LHESQSDRAS 10
+HE +DRAS
Sbjct: 2530 IHEILADRAS 2539
5|Sequence|21|30|SDRASFGEGT
>sp|GE_CHV9D|ENVELOPE glycoprotein E|Cercopithecine herpesvirus 9 (strain DHV)
Query: 1 SDRASFGEGT 10
SD+A++G+ T
Sbjct: 557 SDKAAYGQST 566
>sp|SHUT_SUHVK|VIRION host shutoff protein|Suid herpesvirus 1 (strain Kaplan)
Query: 1 SDRASFGEG 9
SDR FG G
Sbjct: 80 SDRGIFGNG 88
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 2 DRASFGE 8
DR SFGE
Sbjct: 230 DRISFGE 236
>sp|MVP_BYDVN|MOVEMENT protein|Cereal yellow dwarf virus (isolate
Query: 1 SDRASFGEG 9
+DR S GEG
Sbjct: 8 ADRESLGEG 16
6|Sequence|26|35|FGEGTEPDQE
>sp|UL32_GAHVM|PACKAGING protein UL32 homolog|Gallid herpesvirus 2 (strain Chicken/Md5/ATCC
Query: 1 FGEGTEPDQE 10
+GE +EPD E
Sbjct: 436 YGEDSEPDLE 445
>sp|P7_RGDV|PROTEIN P7|Rice gall dwarf virus (RGDV)
Query: 2 GEGTEPD 8
GEGT+PD
Sbjct: 271 GEGTKPD 277
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 FGEGTEPD 8
GE TEPD
Sbjct: 336 LGESTEPD 343
>sp|DIT_BPSPP|DISTAL tail protein|Bacillus phage SPP1 (Bacteriophage SPP1)
Query: 1 FGEGTEPD 8
FG+GTE D
Sbjct: 69 FGDGTETD 76
7|Sequence|31|40|EPDQEPPPPY
>sp|PG042_VACCW|VIRION nicking-joining enzyme|Vaccinia virus (strain Western Reserve)
Query: 2 PDQEPPPPY 10
PD +PP PY
Sbjct: 312 PDADPPIPY 320
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 2 PDQEPPPPY 10
PD +PP PY
Sbjct: 312 PDADPPIPY 320
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PDQEPPPPY 10
PD +PP PY
Sbjct: 312 PDADPPIPY 320
>sp|AC124_NPVAC|PROTEIN AC124|Autographa californica nuclear polyhedrosis virus
Query: 5 EPPPPY 10
+PPPP+
Sbjct: 230 DPPPPF 235
>sp|RIR2_EHV2|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Equine herpesvirus 2 (strain 86/87)
Query: 2 PDQEPPPP 9
PD+E P P
Sbjct: 207 PDEEKPSP 214
>sp|CAP6_ADEM1|PRE-PROTEIN VI|Murine adenovirus A serotype 1
Query: 4 QEPPPPY 10
+EPPPPY
Sbjct: 149 REPPPPY 155
>sp|FIBER_BPSPP|TAIL spike protein|Bacillus phage SPP1 (Bacteriophage SPP1)
Query: 2 PDQEPPPP 9
PD++PP P
Sbjct: 422 PDKKPPKP 429
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 DQEPPPPY 10
D PPPPY
Sbjct: 94 DGLPPPPY 101
Query: 1 EPDQEPPPPY 10
E ++ PP PY
Sbjct: 483 ESEERPPTPY 492
>sp|CAPSD_BNYVS|CAPSID readthrough protein|Beet necrotic yellow vein virus
Query: 6 PPPPY 10
PPPPY
Sbjct: 224 PPPPY 228
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 EPDQEPPP 8
+P +EPPP
Sbjct: 496 QPSEEPPP 503
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 DQEPPPPY 10
D PPPPY
Sbjct: 94 DGLPPPPY 101
Query: 1 EPDQEPPPPY 10
E ++ PP PY
Sbjct: 484 ESEERPPTPY 493
>sp|UL32_EHV1B|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 1 EPDQEPPPP 9
+PD +PP P
Sbjct: 73 DPDNDPPEP 81
>sp|UL32_EHV1A|PACKAGING protein UL32 homolog|Equine herpesvirus 1 (strain AB1)
Query: 1 EPDQEPPPP 9
+PD +PP P
Sbjct: 73 DPDNDPPEP 81
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DQEPPPPY 10
D PPPPY
Sbjct: 94 DGLPPPPY 101
Query: 1 EPDQEPPPPY 10
E ++ PP PY
Sbjct: 484 ESEERPPTPY 493
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 PDQEPPPP 9
PD+ P PP
Sbjct: 275 PDRHPLPP 282
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 PDQEPPPP 9
PD+ P PP
Sbjct: 275 PDRRPLPP 282
>sp|UL32_ALHV1|PACKAGING protein UL32 homolog|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 PDQEPPPP 9
PD PPP
Sbjct: 115 PDAPSPPP 122
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 EPDQEPPPPY 10
+PD++P P Y
Sbjct: 1151 DPDEKPLPNY 1160
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 QEPPPP 9
Q PPPP
Sbjct: 1429 QSPPPP 1434
>sp|Y066_SIFVH|UNCHARACTERIZED protein 66|Sulfolobus islandicus filamentous virus (isolate
Query: 4 QEPPPPY 10
Q PP PY
Sbjct: 180 QSPPDPY 186
>sp|Y107_AFV2P|UNCHARACTERIZED protein ORF107|Acidianus filamentous virus 2 (isolate
Query: 3 DQEPPPP 9
D+ PPPP
Sbjct: 96 DELPPPP 102
>sp|CAPSD_MASV1|CAPSID polyprotein VP86|Mink astrovirus 1 (MAstV-1)
Query: 2 PDQEPPPP 9
P +PPPP
Sbjct: 427 PATQPPPP 434
>sp|REP_CLVK|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate
Query: 4 QEPPPPY 10
QEPP PY
Sbjct: 173 QEPPAPY 179
>sp|REP_CLVN|REPLICATION-ASSOCIATED protein|African cassava mosaic virus (isolate
Query: 4 QEPPPPY 10
QEPP PY
Sbjct: 173 QEPPAPY 179
8|Sequence|36|45|PPPPYQEQVP
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PPPYQEQVP 10
PP Y +Q+P
Sbjct: 717 PPSYTQQIP 725
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PPPYQEQVP 10
PP Y +Q+P
Sbjct: 712 PPSYTQQIP 720
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PPPYQEQVP 10
PP Y +Q+P
Sbjct: 716 PPSYTQQIP 724
>sp|VNS3_AHSV8|NON-STRUCTURAL protein NS3|African horse sickness virus 8
Query: 2 PPPYQEQVP 10
PPPY P
Sbjct: 25 PPPYHPTAP 33
>sp|VNS3_AHSV1|NON-STRUCTURAL protein NS3|African horse sickness virus 1
Query: 2 PPPYQEQVP 10
PPPY P
Sbjct: 25 PPPYHPTAP 33
>sp|GB_GPCMV|ENVELOPE glycoprotein B|Guinea pig cytomegalovirus (strain 22122)
Query: 2 PPPYQEQVP 10
PPPY + P
Sbjct: 803 PPPYPGEAP 811
>sp|VNS3_AHSV2|NON-STRUCTURAL protein NS3|African horse sickness virus 2
Query: 2 PPPYQEQVP 10
PPPY P
Sbjct: 25 PPPYHPTAP 33
>sp|ENV_SIVSP|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 2 PPPYQEQVP 10
PP Y +Q+P
Sbjct: 738 PPAYVQQIP 746
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 2 PPPYQEQVP 10
PPP ++ VP
Sbjct: 21 PPPSEDSVP 29
>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 2 PPPYQEQVP 10
PP Y +Q+P
Sbjct: 734 PPAYVQQIP 742
>sp|CAPSD_BNYVS|CAPSID readthrough protein|Beet necrotic yellow vein virus
Query: 1 PPPPY 5
PPPPY
Sbjct: 224 PPPPY 228
>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)
Query: 1 PPPPYQEQVP 10
PP Y+ Q P
Sbjct: 112 PPSKYEPQTP 121
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 PPPYQEQVP 10
PPP +E VP
Sbjct: 122 PPPSREHVP 130
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPPYQEQV 9
PP Y+E V
Sbjct: 811 PPSYEESV 818
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 PPPYQEQV 9
PP Y+E V
Sbjct: 811 PPSYEESV 818
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPYQEQV 9
PP Y+E V
Sbjct: 810 PPSYEESV 817
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPPPY 5
PPPPY
Sbjct: 97 PPPPY 101
>sp|OE66_NPVOP|OCCLUSION-DERIVED virus envelope protein E66|Orgyia pseudotsugata multicapsid
Query: 1 PPPPYQEQVP 10
P PP +Q P
Sbjct: 143 PDPPPHQQAP 152
>sp|OE66_NPVAC|NON-SULFATED chondroitin lyase E66|Autographa californica nuclear polyhedrosis
Query: 1 PPPPYQEQVP 10
P PP +Q P
Sbjct: 166 PDPPPHQQAP 175
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPPPY 5
PPPPY
Sbjct: 97 PPPPY 101
>sp|POL_MLVRD|GAG-POL polyprotein|Radiation murine leukemia virus
Query: 2 PPPYQEQVP 10
PPPY EQ P
Sbjct: 161 PPPYGEQGP 169
>sp|GAG_MLVBM|GAG polyprotein|Murine leukemia virus (strain BM5
Query: 2 PPPYQEQVP 10
PPPY EQ P
Sbjct: 161 PPPYGEQGP 169
>sp|POL_MLVBM|GAG-POL polyprotein|Murine leukemia virus (strain BM5
Query: 2 PPPYQEQVP 10
PPPY EQ P
Sbjct: 161 PPPYGEQGP 169
>sp|GAG_MLVRD|GAG polyprotein|Radiation murine leukemia virus
Query: 2 PPPYQEQVP 10
PPPY EQ P
Sbjct: 161 PPPYGEQGP 169
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPPYQEQV 9
PPP Y+E +
Sbjct: 586 PPPDYEETL 594
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPPYQEQV 9
PPP Y+E +
Sbjct: 586 PPPDYEETL 594
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPPPY 5
PPPPY
Sbjct: 97 PPPPY 101
>sp|GAG_MSVFR|GAG polyprotein|FBR murine osteosarcoma virus (FBR-MSV)
Query: 2 PPPYQEQVP 10
PPPY EQ P
Sbjct: 161 PPPYGEQGP 169
>sp|GAG_AVIER|GAG polyprotein|Avian erythroblastosis virus (strain ES4)
Query: 1 PPPPY 5
PPPPY
Sbjct: 87 PPPPY 91
>sp|CAP6_ADEM1|PRE-PROTEIN VI|Murine adenovirus A serotype 1
Query: 1 PPPPY 5
PPPPY
Sbjct: 151 PPPPY 155
>sp|TOP1P_MIMIV|DNA topoisomerase 1 type prokaryotic|Acanthamoeba polyphaga mimivirus
Query: 1 PPPPYQE 7
PPP Y E
Sbjct: 471 PPPRYSE 477
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPPYQ 6
PPPPYQ
Sbjct: 357 PPPPYQ 362
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPPYQ 6
PPPPYQ
Sbjct: 357 PPPPYQ 362
>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine
Query: 1 PPPPYQEQVP 10
PPP +++ VP
Sbjct: 2344 PPPKHEDDVP 2353
>sp|GAGC_AVISC|P47(GAG-CRK) protein|Avian sarcoma virus CT10 (Avian
Query: 1 PPPPY 5
PPPPY
Sbjct: 173 PPPPY 177
9|Sequence|41|50|QEQVPVPVYH
>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus
Query: 3 QVPVPVYH 10
Q+P+P +H
Sbjct: 1064 QIPLPTFH 1071
>sp|YL490_MIMIV|UNCHARACTERIZED protein L490|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 EQVPVPVY 9
E +PVP+Y
Sbjct: 423 EIIPVPLY 430
>sp|RPB1_ASFM2|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate
Query: 3 QVPVPVY 9
Q P+PVY
Sbjct: 984 QTPIPVY 990
>sp|RPB1_ASFWA|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate
Query: 3 QVPVPVY 9
Q P+PVY
Sbjct: 984 QTPIPVY 990
>sp|RPB1_ASFP4|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate
Query: 3 QVPVPVY 9
Q P+PVY
Sbjct: 984 QTPIPVY 990
>sp|RPB1_ASFK5|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (isolate
Query: 3 QVPVPVY 9
Q P+PVY
Sbjct: 984 QTPIPVY 990
>sp|RPB1_ASFB7|DNA-DIRECTED RNA polymerase RPB1 homolog|African swine fever virus (strain
Query: 3 QVPVPVY 9
Q P+PVY
Sbjct: 984 QTPIPVY 990
>sp|ENV_SFVCP|ENVELOPE glycoprotein gp130|Simian foamy virus (isolate chimpanzee)
Query: 2 EQVPVPVYH 10
+Q P+P YH
Sbjct: 254 DQCPLPGYH 262
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 EQVPVPVYH 10
+Q P+P YH
Sbjct: 254 DQCPLPGYH 262
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 QVPVPVY 9
Q P+PVY
Sbjct: 530 QTPLPVY 536
10|Sequence|46|55|VPVYHPTPSQ
>sp|36010_ASFK5|PROTEIN MGF 360-10L|African swine fever virus (isolate
Query: 3 VYHPTPS 9
+YHP PS
Sbjct: 313 IYHPDPS 319
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 VYHPTP 8
+YHPTP
Sbjct: 1705 LYHPTP 1710
>sp|POL1_CNSV|RNA1 polyprotein|Cycas necrotic stunt virus (CNSV)
Query: 2 PVYHPTPSQ 10
P Y PTP Q
Sbjct: 2087 PFYKPTPDQ 2095
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 VYHPTP 8
+YHPTP
Sbjct: 1705 LYHPTP 1710
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 VYHPTP 8
+YHPTP
Sbjct: 1705 LYHPTP 1710
>sp|RDRP_RGDV|RNA-DIRECTED RNA polymerase P1|Rice gall dwarf virus (RGDV)
Query: 3 VYHPTPS 9
VYHP P+
Sbjct: 221 VYHPVPA 227
>sp|GLNA_MIMIV|PUTATIVE glutamine synthetase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 3 VYHPTPSQ 10
VYHP P Q
Sbjct: 231 VYHPKPLQ 238
>sp|HELI1_TNAVC|PUTATIVE ATP-dependent RNA helicase|Trichoplusia ni ascovirus 2c (TnAV-2c)
Query: 1 VPVYHPT 7
VP++HPT
Sbjct: 624 VPLHHPT 630
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 YHPTPSQ 10
+HP+PSQ
Sbjct: 1793 HHPSPSQ 1799
>sp|VNS3_AHSV8|NON-STRUCTURAL protein NS3|African horse sickness virus 8
Query: 2 PVYHPT 7
P YHPT
Sbjct: 26 PPYHPT 31
>sp|INTG_SPV1R|PUTATIVE integrase ORF3|Spiroplasma virus SpV1-R8A2 B (SpV1)
Query: 3 VYHPTPSQ 10
VYH +PS+
Sbjct: 94 VYHDSPSE 101
>sp|VNS3_AHSV1|NON-STRUCTURAL protein NS3|African horse sickness virus 1
Query: 2 PVYHPT 7
P YHPT
Sbjct: 26 PPYHPT 31
>sp|VNS3_AHSV2|NON-STRUCTURAL protein NS3|African horse sickness virus 2
Query: 2 PVYHPT 7
P YHPT
Sbjct: 26 PPYHPT 31
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPVYHPTPS 9
+PV HPT S
Sbjct: 206 LPVLHPTSS 214
>sp|POL_CAMVC|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain CM-1841)
Query: 2 PVYHPTPSQ 10
P++HP P +
Sbjct: 536 PLHHPLPEE 544
>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain
Query: 3 VYHPTP 8
+YHP+P
Sbjct: 1702 LYHPSP 1707
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VPVYHPTPS 9
+PV HPT S
Sbjct: 206 LPVLHPTSS 214
>sp|POL_CAMVS|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain Strasbourg)
Query: 2 PVYHPTPSQ 10
P++HP P +
Sbjct: 536 PLHHPLPEE 544
>sp|POL_CAMVE|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain BBC)
Query: 2 PVYHPTPSQ 10
P++HP P +
Sbjct: 536 PLHHPLPEE 544
>sp|POL_CAMVN|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain NY8153)
Query: 2 PVYHPTPSQ 10
P++HP P +
Sbjct: 537 PLHHPLPEE 545
>sp|POL_CAMVD|ENZYMATIC polyprotein|Cauliflower mosaic virus (strain D/H)
Query: 2 PVYHPTPSQ 10
P++HP P +
Sbjct: 531 PLHHPLPEE 539
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 VPVYHPTPS 9
+P +HPTP+
Sbjct: 348 LPGFHPTPA 356
>sp|VF022_IIV3|PUTATIVE helicase 087L|Invertebrate iridescent virus 3 (IIV-3)
Query: 1 VPVYHP--TPS 9
+P+YHP TP+
Sbjct: 9 LPLYHPVQTPA 19
>sp|KIPN_BPT4|POLYNUCLEOTIDE kinase|Enterobacteria phage T4 (Bacteriophage T4)
Query: 1 VPVYHPTPSQ 10
+PVY+ TP +
Sbjct: 149 LPVYNGTPGK 158
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 VPVYHPTP 8
+P +HPTP
Sbjct: 348 LPNFHPTP 355
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 VPVYHPTP 8
+P +HPTP
Sbjct: 348 LPNFHPTP 355
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 VPVYHPTP 8
+P +HPTP
Sbjct: 348 LPNFHPTP 355
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 VPVYHPTP 8
+P +HPTP
Sbjct: 348 LPGFHPTP 355
>sp|PRIM_ASFB7|PUTATIVE helicase/primase complex protein|African swine fever virus (strain
Query: 2 PVYHPTP 8
PVY+ TP
Sbjct: 736 PVYYKTP 742
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 3 VYHPTPS 9
+Y+PTPS
Sbjct: 290 IYYPTPS 296
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 VYHPTPS 9
+Y+PTPS
Sbjct: 290 IYYPTPS 296
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 PVYHPTP 8
P+YHP P
Sbjct: 20 PLYHPRP 26
>sp|YL806_MIMIV|UNCHARACTERIZED protein L806|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 YHPTPS 9
YHP PS
Sbjct: 85 YHPNPS 90
>sp|TGB1_SHVX|MOVEMENT and silencing protein TGBp1|Shallot virus X (ShVX)
Query: 1 VPVYHPTPS 9
+P+Y P PS
Sbjct: 150 LPIYGPNPS 158
11|Sequence|51|60|PTPSQTRLAT
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 PTPSQTRLAT 10
PTP+QT L T
Sbjct: 179 PTPTQTNLLT 188
>sp|VF268_IIV6|UNCHARACTERIZED protein 268L|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 TPSQTR 7
TPSQTR
Sbjct: 11 TPSQTR 16
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 PTPSQTRLAT 10
P PS+T AT
Sbjct: 31 PIPSETTTAT 40
>sp|TSP_BPMBZ|TAIL sheath protein|Mycobacterium phage Bxz1 (Mycobacteriophage Bxz1)
Query: 1 PTPSQTRLAT 10
P PS TR+A
Sbjct: 355 PVPSATRIAN 364
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTPSQTRLAT 10
P PS+T AT
Sbjct: 31 PIPSETTTAT 40
12|Sequence|56|65|TRLATQLTEE
***** No hits found ******
13|Sequence|61|70|QLTEEEQIRI
>sp|Y098_GVCL|UNCHARACTERIZED 41.0 kDa protein in|Cryptophlebia leucotreta granulosis virus
Query: 2 LTEEEQIRI 10
+T+E+Q+RI
Sbjct: 178 ITDEDQVRI 186
>sp|38K_NPVAC|UNCHARACTERIZED 38.0 kDa protein in|Autographa californica nuclear polyhedrosis
Query: 2 LTEEEQIRI 10
+TEEEQ+ I
Sbjct: 146 ITEEEQVEI 154
>sp|L_BRSVA|RNA-DIRECTED RNA polymerase L|Bovine respiratory syncytial virus (strain
Query: 2 LTEEEQIR 9
LTEE+Q R
Sbjct: 343 LTEEDQFR 350
>sp|VP5_FDVS|UNCHARACTERIZED protein VP5|Fiji disease virus (isolate Sugarcane)
Query: 2 LTEEEQIRI 10
++EEE+IRI
Sbjct: 1 MSEEEKIRI 9
14|Sequence|66|75|EQIRIAQRIG
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 IRIAQRIG 10
I +AQRIG
Sbjct: 821 IEVAQRIG 828
15|Sequence|71|80|AQRIGLIQHL
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 QRIGLIQHL 10
+RIG+I H+
Sbjct: 623 ERIGMILHM 631
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 QRIGLIQHL 10
+RIG+I H+
Sbjct: 623 ERIGMILHM 631
>sp|VG41_ICHVA|UNCHARACTERIZED protein ORF41|Ictalurid herpesvirus 1 (strain Auburn)
Query: 2 QRIGLIQHL 10
QR+ L+ HL
Sbjct: 133 QRLSLVDHL 141
>sp|UL79_ALHV1|GENE 18 protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 QRIGLIQHL 10
+R+GL QH+
Sbjct: 140 RRLGLCQHV 148
16|Sequence|76|85|LIQHLPKGVY
>sp|POLG_FMDVT|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 LIQHLPKGVY 10
++ H PKGVY
Sbjct: 368 VLPHEPKGVY 377
>sp|POLG_FMDVS|GENOME polyprotein|Foot-and-mouth disease virus (isolate
Query: 1 LIQHLPKGVY 10
++ H PKGVY
Sbjct: 368 VLPHEPKGVY 377
>sp|POLG_RTSVA|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 1 LIQHLPKG 8
L++H+PKG
Sbjct: 2862 LLKHIPKG 2869
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 4 HLPKGV 9
HLPKGV
Sbjct: 176 HLPKGV 181
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 4 HLPKGV 9
HLPKGV
Sbjct: 367 HLPKGV 372
>sp|L_TUPVT|RNA-DIRECTED RNA polymerase L|Tupaia virus (isolate Tupaia/Thailand/-/1986)
Query: 1 LIQHLPKGVY 10
LIQH+ G Y
Sbjct: 473 LIQHVSSGAY 482
>sp|GAG_SRV1|GAG polyprotein|Simian retrovirus SRV-1
Query: 3 QHLPKG 8
QH+PKG
Sbjct: 278 QHIPKG 283
>sp|GAG_MPMV|GAG polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QHLPKG 8
QH+PKG
Sbjct: 277 QHIPKG 282
>sp|PRO_SRV1|GAG-PRO polyprotein|Simian retrovirus SRV-1
Query: 3 QHLPKG 8
QH+PKG
Sbjct: 278 QHIPKG 283
>sp|PRO_MPMV|GAG-PRO polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QHLPKG 8
QH+PKG
Sbjct: 277 QHIPKG 282
>sp|ENV_OMVVS|ENVELOPE glycoprotein gp160|Ovine maedi visna related virus
Query: 1 LIQHLPKGV 9
++QH+ KGV
Sbjct: 718 MVQHVAKGV 726
>sp|ENV_CAEVG|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain
Query: 1 LIQHLPKGV 9
++QH+ KGV
Sbjct: 686 MVQHVAKGV 694
>sp|ENV_CAEVC|ENVELOPE glycoprotein|Caprine arthritis encephalitis virus (strain
Query: 1 LIQHLPKGV 9
++QH+ KGV
Sbjct: 688 MVQHVAKGV 696
>sp|GLYCO_RYSV|GLYCOPROTEIN yellow stunt virus (RYSV)
Query: 1 LIQHLPKGV 9
LI+HL KG+
Sbjct: 591 LIKHLVKGI 599
>sp|POLG_RTSVT|GENOME polyprotein|Rice tungro spherical virus (strain
Query: 1 LIQHLPKG 8
L++H+P+G
Sbjct: 2859 LLKHIPRG 2866
>sp|ENV_VILVK|ENVELOPE glycoprotein gp160|Maedi visna virus (strain KV1772)
Query: 1 LIQHLPKGV 9
++QH+ KG+
Sbjct: 712 MVQHIAKGI 720
>sp|ENV_VILV2|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514
Query: 1 LIQHLPKGV 9
++QH+ KG+
Sbjct: 720 MVQHIAKGI 728
>sp|ENV_VILV1|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514
Query: 1 LIQHLPKGV 9
++QH+ KG+
Sbjct: 718 MVQHIAKGI 726
>sp|ENV_VILV|ENVELOPE glycoprotein gp160|Maedi visna virus (strain 1514)
Query: 1 LIQHLPKGV 9
++QH+ KG+
Sbjct: 712 MVQHIAKGI 720
>sp|NCAP_TAMVU|NUCLEOPROTEIN mammarenavirus (isolate Rat/United States/W
Query: 1 LIQHLPKGV 9
+I+HLPK +
Sbjct: 441 IIKHLPKSM 449
>sp|TEG3_PSHV1|TEGUMENT protein UL14|Psittacid herpesvirus 1 (isolate Amazon
Query: 1 LIQHLPKG 8
L QHLP G
Sbjct: 135 LSQHLPAG 142
>sp|POL_MPMV|GAG-PRO-POL polyprotein|Mason-Pfizer monkey virus (MPMV) (Simian
Query: 3 QHLPKG 8
QH+PKG
Sbjct: 277 QHIPKG 282
>sp|POL_SRV1|GAG-PRO-POL polyprotein|Simian retrovirus SRV-1
Query: 3 QHLPKG 8
QH+PKG
Sbjct: 278 QHIPKG 283
>sp|VP5_LBVAV|PROTEIN 5|Lettuce big-vein associated virus (isolate
Query: 1 LIQHLPKGVY 10
L+Q +P GV+
Sbjct: 268 LLQRIPTGVH 277
>sp|SPIKE_CVRSD|SPIKE glycoprotein|Rat coronavirus (strain 681) (RCV-SDAV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1138 LVQNAPYGLY 1147
>sp|SPIKE_CVPIA|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1132 LVQNAPYGLY 1141
>sp|SPIKE_CVP67|SPIKE glycoprotein|Porcine hemagglutinating encephalomyelitis virus (strain
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1132 LVQNAPYGLY 1141
>sp|SPIKE_CVMA5|SPIKE glycoprotein|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1102 LVQNAPYGLY 1111
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1136 LVQNAPYGLY 1145
>sp|SPIKE_CVBV|SPIKE glycoprotein|Bovine coronavirus (strain vaccine) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBQ|SPIKE glycoprotein|Bovine coronavirus (strain Quebec) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBOK|SPIKE glycoprotein|Bovine coronavirus (strain OK-0514) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBM|SPIKE glycoprotein|Bovine coronavirus (strain Mebus) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBLY|SPIKE glycoprotein|Bovine coronavirus (strain LY-138) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBLU|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBLS|SPIKE glycoprotein|Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBL9|SPIKE glycoprotein|Bovine coronavirus (strain L9) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBF|SPIKE glycoprotein|Bovine coronavirus (strain F15) (BCoV)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|SPIKE_CVBEN|SPIKE glycoprotein|Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT)
Query: 1 LIQHLPKGVY 10
L+Q+ P G+Y
Sbjct: 1146 LVQNAPYGLY 1155
>sp|VME1_FIPV|MEMBRANE protein|Feline coronavirus (strain FIPV WSU-79/1146)
Query: 2 IQHLPKGV 9
I+HLPK V
Sbjct: 199 IEHLPKYV 206
>sp|CAPSD_PSVJ|CAPSID protein|Peanut stunt virus (strain J)
Query: 1 LIQHLPKGV 9
+ QH+P G+
Sbjct: 151 MYQHVPNGI 159
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 HLPKGVY 10
HLP+G Y
Sbjct: 28 HLPEGQY 34
17|Sequence|81|90|PKGVYDPGRD
>sp|UL95_ALHV1|GENE 34 protein|Alcelaphine herpesvirus 1 (strain C500)
Query: 1 PKGVYDPGRD 10
P YDPGRD
Sbjct: 197 PPFFYDPGRD 206
>sp|DNLI_FOWPN|DNA ligase|Fowlpox virus (strain NVSL) (FPV)
Query: 2 KGVYDPG 8
KGVY+PG
Sbjct: 391 KGVYEPG 397
>sp|VP4_FDVS|UNCHARACTERIZED protein VP4|Fiji disease virus (isolate Sugarcane)
Query: 1 PKGVYDP 7
P+G++DP
Sbjct: 898 PEGIFDP 904
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 3 GVYDPGR 9
GVY+PG+
Sbjct: 388 GVYEPGK 394
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 3 GVYDPGR 9
GVY+PG+
Sbjct: 386 GVYEPGK 392
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GVYDPGR 9
GVY+PG+
Sbjct: 386 GVYEPGK 392
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 GVYDPGR 9
GVY+PG+
Sbjct: 386 GVYEPGK 392
>sp|YL079_MIMIV|TNPB-LIKE protein L79|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 PKGVYDPGRD 10
PK +Y P +D
Sbjct: 53 PKSIYVPNKD 62
>sp|DNLI_VACCW|DNA ligase|Vaccinia virus (strain Western Reserve)
Query: 3 GVYDPGR 9
GVY+PG+
Sbjct: 386 GVYEPGK 392
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GVYDPGR 9
GVY+PG+
Sbjct: 386 GVYEPGK 392
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 PKGVYDPG 8
PK +YD G
Sbjct: 5949 PKAIYDIG 5956
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 KGVYDP 7
KG YDP
Sbjct: 5 KGTYDP 10
>sp|PORTL_BPSP1|PROBABLE portal protein|Bacillus phage SP01 (Bacteriophage SP01)
Query: 5 YDPGRD 10
Y+PGRD
Sbjct: 138 YNPGRD 143
>sp|023R_FRG3G|UNCHARACTERIZED protein 023R|Frog virus 3 (isolate Goorha)
Query: 1 PKGVYDP 7
PKG Y P
Sbjct: 133 PKGTYTP 139
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 PKGVYDP----GRD 10
P GVY+P GRD
Sbjct: 1316 PPGVYEPAYLGGRD 1329
>sp|YL629_MIMIV|UNCHARACTERIZED protein L629|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 VYDPGRD 10
VY+PG D
Sbjct: 56 VYNPGND 62
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 PKGVYDPG 8
P GVY+P
Sbjct: 1317 PPGVYEPA 1324
>sp|Y146_HVAVE|PUTATIVE structural protein ORF146|Heliothis virescens ascovirus 3e
Query: 2 KGVYDPG 8
+G+Y PG
Sbjct: 279 RGIYSPG 285
18|Sequence|86|95|DPGRDGSEKK
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 DPGRDG 6
DPGRDG
Sbjct: 412 DPGRDG 417
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 DPGRDG 6
DPGRDG
Sbjct: 412 DPGRDG 417
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 DPGRDG 6
DPGRDG
Sbjct: 412 DPGRDG 417
>sp|CEP1_PSHV1|CYTOPLASMIC envelopment protein 1|Psittacid herpesvirus 1 (isolate Amazon
Query: 3 GRDGSE 8
GRDGSE
Sbjct: 156 GRDGSE 161
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 DPGRDG 6
DPGR+G
Sbjct: 412 DPGRNG 417
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 DPGRDG 6
DPGR+G
Sbjct: 412 DPGRNG 417
19|Sequence|91|100|GSEKKIRECV
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SEKKIRECV 10
SE+K+ EC+
Sbjct: 204 SERKVYECI 212
>sp|TOP1_VACCW|DNA topoisomerase 1B|Vaccinia virus (strain Western Reserve)
Query: 2 SEKKIRECV 10
SE+K+ EC+
Sbjct: 204 SERKVYECI 212
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SEKKIRECV 10
SE+K+ EC+
Sbjct: 204 SERKVYECI 212
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SEKKIRECV 10
SE+K+ EC+
Sbjct: 204 SERKVYECI 212
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 2 SEKKIRECV 10
SE+K+ EC+
Sbjct: 204 SERKVYECI 212
>sp|POL2_CRLVP|RNA2 polyprotein|Cherry rasp leaf virus (isolate
Query: 2 SEKKIREC 9
SE+K+R+C
Sbjct: 683 SEEKLRQC 690
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 GSEKKIRECV 10
GS+KKIR+ +
Sbjct: 297 GSDKKIRQSI 306
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 SEKKIRECV 10
+EKK+ +CV
Sbjct: 2434 TEKKLGQCV 2442
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 SEKKIRECV 10
+E+K+R CV
Sbjct: 99 AERKMRRCV 107
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 SEKKIRECV 10
+E+K+R CV
Sbjct: 99 AERKMRRCV 107
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 2 SEKKIRECV 10
+E+K+R CV
Sbjct: 99 AERKMRRCV 107
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 2 SEKKIRECV 10
+E+K+R CV
Sbjct: 99 AERKMRRCV 107
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 2 SEKKIRECV 10
+E+K+R CV
Sbjct: 99 AERKMRRCV 107
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 2 SEKKIRECV 10
+E+K+R CV
Sbjct: 99 AERKMRRCV 107
20|Sequence|96|105|IRECVICMMD
>sp|BXCN_CBCP|NON-TOXIC nonhemagglutinin type C|Clostridium botulinum C phage (Clostridium
Query: 3 ECVICMMD 10
EC+IC++D
Sbjct: 1110 ECIICVLD 1117
>sp|BXDN_CBDP|NON-TOXIC nonhemagglutinin type D|Clostridium botulinum D phage (Clostridium
Query: 3 ECVICMMD 10
EC+IC+ D
Sbjct: 1110 ECIICVSD 1117
>sp|1A_CMVY|REPLICATION protein 1a|Cucumber mosaic virus (strain Y)
Query: 3 ECVIC 7
ECVIC
Sbjct: 686 ECVIC 690
>sp|1A_CMVO|REPLICATION protein 1a|Cucumber mosaic virus (strain O)
Query: 3 ECVIC 7
ECVIC
Sbjct: 686 ECVIC 690
>sp|1A_CMVNT|REPLICATION protein 1a|Cucumber mosaic virus (strain NT9)
Query: 3 ECVIC 7
ECVIC
Sbjct: 686 ECVIC 690
>sp|1A_CMVFN|REPLICATION protein 1a|Cucumber mosaic virus (strain FNY)
Query: 3 ECVIC 7
ECVIC
Sbjct: 686 ECVIC 690
>sp|1A_CMVII|REPLICATION protein 1a|Cucumber mosaic virus (strain Iizuka)
Query: 3 ECVIC 7
ECVIC
Sbjct: 686 ECVIC 690
>sp|1A_PSVJ|REPLICATION protein 1a|Peanut stunt virus (strain J)
Query: 3 ECVICMMD 10
+CVIC D
Sbjct: 694 DCVICNSD 701
>sp|PTPJ4_MDBVW|PROBABLE tyrosine phosphatase protein J4|Microplitis demolitor bracovirus
Query: 4 CVICMMD 10
CV C++D
Sbjct: 238 CVYCLLD 244
21|Sequence|101|110|ICMMDFVYGD
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ICMMDFVYG 9
+C M++VYG
Sbjct: 144 LCKMNYVYG 152
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ICMMDFVYG 9
+C M++VYG
Sbjct: 144 LCKMNYVYG 152
>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus
Query: 1 ICMMDFVYGD 10
+CM+ V+GD
Sbjct: 2913 VCMLRSVFGD 2922
>sp|ICP27_GAHVM|MRNA export factor ICP27 homolog|Gallid herpesvirus 2 (strain
Query: 2 CMMDFVYGD 10
CM+D+V G+
Sbjct: 418 CMIDYVPGE 426
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 CMMDFVYGD 10
C+M +V+G+
Sbjct: 639 CLMHYVFGN 647
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 CMMDFVYGD 10
C+M +V+G+
Sbjct: 640 CLMHYVFGN 648
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 CMMDFVYGD 10
C+M +V+G+
Sbjct: 640 CLMHYVFGN 648
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 CMMDFVYGD 10
C+M +V+G+
Sbjct: 640 CLMHYVFGN 648
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 CMMDFVYGD 10
C+M +V+G+
Sbjct: 640 CLMHYVFGN 648
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 ICMMDFVYG 9
+C+ FVYG
Sbjct: 331 LCLNGFVYG 339
>sp|RDRP_PMTVS|REPLICASE large subunit|Potato mop-top virus (isolate Potato/Sweden/Sw)
Query: 3 MMDFVYG 9
M DF+YG
Sbjct: 880 MRDFIYG 886
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ICMMDFVYG 9
+C+ FVYG
Sbjct: 331 MCLNGFVYG 339
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 1 ICMMDFVYGD 10
IC++ F Y +
Sbjct: 32 ICLLQFAYAN 41
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 2 CMMDFVYGD 10
C++ + YGD
Sbjct: 194 CVLKYTYGD 202
>sp|POL1_GFLV|RNA1 polyprotein|Grapevine fanleaf virus (GFLV)
Query: 1 ICMMDFVYGD 10
+C++ VY D
Sbjct: 369 LCLLSLVYND 378
>sp|U24_HHV6Z|U24 protein|Human herpesvirus 6B (strain Z29)
Query: 1 ICMMDFVYG 9
+ MMD +YG
Sbjct: 14 VLMMDVMYG 22
>sp|V244_FOWPN|PUTATIVE ankyrin repeat protein FPV244|Fowlpox virus (strain NVSL) (FPV)
Query: 1 ICMMDFVYGD 10
IC+ DF+ D
Sbjct: 524 ICIQDFIRHD 533
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CMMDFVYG 9
C+++++YG
Sbjct: 194 CVLEYIYG 201
>sp|IL1BP_VACCW|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Western Reserve)
Query: 2 CMMDFVYG 9
C+++++YG
Sbjct: 194 CVLEYIYG 201
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 CMMDFVYGD 10
C++ +YGD
Sbjct: 104 CVLSRIYGD 112
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 CMMDFVYGD 10
C++ +YGD
Sbjct: 104 CVLSRIYGD 112
>sp|YL185_MIMIV|UNCHARACTERIZED protein L185|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 ICMMDFVYG 9
IC M+F+ G
Sbjct: 58 ICFMNFIVG 66
>sp|P26_LIYV9|PROTEIN p26|Lettuce infectious yellows virus (isolate
Query: 2 CMMDFV 7
C+MDF+
Sbjct: 31 CLMDFI 36
>sp|130R_IIV6|UNCHARACTERIZED protein 130R|Invertebrate iridescent virus 6 (IIV-6)
Query: 3 MMDFVYGD 10
+M F YGD
Sbjct: 48 VMQFTYGD 55
22|Sequence|106|115|FVYGDPIRFL
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 YGDPIRFL 10
YG PIRFL
Sbjct: 45 YGRPIRFL 52
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YGDPIRFL 10
YG PIRFL
Sbjct: 45 YGRPIRFL 52
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YGDPIRFL 10
YG PIRFL
Sbjct: 46 YGRPIRFL 53
>sp|POL_FIVT2|POL polyprotein|Feline immunodeficiency virus (isolate TM2)
Query: 1 FVYGDPIRFL 10
FV G PI+FL
Sbjct: 56 FVNGHPIKFL 65
>sp|R1AB_BYVU|REPLICASE polyprotein 1ab|Beet yellows virus (isolate Ukraine)
Query: 1 FVYGDPIRFL 10
F GD +RFL
Sbjct: 1155 FSVGDAVRFL 1164
>sp|Y090_AFV2P|UNCHARACTERIZED protein ORF90|Acidianus filamentous virus 2 (isolate
Query: 5 DPIRFL 10
DPIRFL
Sbjct: 60 DPIRFL 65
>sp|RDRP_ROTTU|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTRF|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1])
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTBN|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTW3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTBU|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Cow/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTSP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A)
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTSH|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Monkey/South
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTS1|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A)
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTPY|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7])
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|RDRP_ROTPG|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Pig/United
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|PRIM_ALHV1|DNA primase|Alcelaphine herpesvirus 1 (strain C500)
Query: 2 VYGDPIRFL 10
++G+PI +L
Sbjct: 396 IFGNPIHYL 404
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YGDPIRFL 10
YGD RFL
Sbjct: 503 YGDVTRFL 510
>sp|MATRX_BDV1|MATRIX protein|Borna disease virus 1 (BoDV-1)
Query: 2 VYGDPIR 8
VY DPIR
Sbjct: 92 VYKDPIR 98
>sp|MATRX_BDVV|MATRIX protein|Borna disease virus (strain V)
Query: 2 VYGDPIR 8
VY DPIR
Sbjct: 92 VYKDPIR 98
23|Sequence|111|120|PIRFLPCMHI
>sp|IAP4_OSHVF|PUTATIVE apoptosis inhibitor ORF106|Ostreid herpesvirus 1 (isolate France)
Query: 2 IRFLPCMHI 10
I F+PC H+
Sbjct: 415 IAFIPCGHV 423
>sp|REP_BPI22|REPLICATION-ASSOCIATED protein G2P|Enterobacteria phage I2-2 (Bacteriophage I2-2)
Query: 5 LPCMHI 10
LPC+H+
Sbjct: 9 LPCLHV 14
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 FLPCMHI 10
FLPC+++
Sbjct: 791 FLPCLYV 797
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 FLPCMHI 10
FLPC+++
Sbjct: 791 FLPCLYV 797
>sp|IL10H_EHV2T|VIRAL interleukin-10 homolog|Equine herpesvirus 2 (strain T400/3)
Query: 3 RFLPC 7
RFLPC
Sbjct: 129 RFLPC 133
>sp|IL10H_EHV2|VIRAL interleukin-10 homolog|Equine herpesvirus 2 (strain 86/87)
Query: 3 RFLPC 7
RFLPC
Sbjct: 129 RFLPC 133
>sp|YG78_BPP21|UNCHARACTERIZED 13.5 kDa protein in|Enterobacteria phage P21 (Bacteriophage 21)
Query: 2 IRFLPCMHI 10
IR L C+H+
Sbjct: 77 IRVLTCLHL 85
>sp|IAP2_NPVOP|PROBABLE apoptosis inhibitor 2|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 4 FLPCMHI 10
FLPC H+
Sbjct: 201 FLPCRHL 207
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 4 FLPCMHI 10
LPC+H+
Sbjct: 827 LLPCLHV 833
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 4 FLPCMHI 10
LPC+H+
Sbjct: 827 LLPCLHV 833
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 4 FLPCMHI 10
LPC+H+
Sbjct: 827 LLPCLHV 833
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 4 FLPCMHI 10
LPC+H+
Sbjct: 827 LLPCLHV 833
>sp|Y060_OSHVF|UNCHARACTERIZED protein ORF60|Ostreid herpesvirus 1 (isolate France)
Query: 4 FLPCM 8
FLPCM
Sbjct: 343 FLPCM 347
>sp|POL2_GCMV|RNA2 polyprotein|Grapevine chrome mosaic virus (GCMV)
Query: 3 RFLPCMHI 10
R PC+HI
Sbjct: 304 RMGPCLHI 311
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 4 FLPCMHI 10
LPC+H+
Sbjct: 832 LLPCLHV 838
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 4 FLPCMHI 10
LPC+H+
Sbjct: 832 LLPCLHV 838
>sp|C8_VACCW|PROTEIN C8|Vaccinia virus (strain Western Reserve)
Query: 2 IRFLPCMHI 10
IRF+ C+++
Sbjct: 4 IRFIACLYL 12
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IRFLPCMHI 10
IRF+ C+++
Sbjct: 4 IRFIACLYL 12
>sp|YR106_MIMIV|UNCHARACTERIZED protein R106|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 IRFLPCMH 9
I ++PC H
Sbjct: 59 IMYIPCYH 66
>sp|IAP2_NPVAC|PROBABLE apoptosis inhibitor 2|Autographa californica nuclear polyhedrosis
Query: 4 FLPCMHI 10
F+PC H+
Sbjct: 214 FMPCRHL 220
>sp|095L_IIV6|PUTATIVE RING finger protein 095L|Invertebrate iridescent virus 6 (IIV-6)
Query: 4 FLPCMHI 10
FLPC H+
Sbjct: 51 FLPCAHV 57
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 2 IRFLPC 7
IRF+PC
Sbjct: 444 IRFIPC 449
>sp|IAP3_NPVOP|E3 ubiquitin-protein ligase IAP-3|Orgyia pseudotsugata multicapsid
Query: 4 FLPCMHI 10
F+PC H+
Sbjct: 233 FVPCGHV 239
24|Sequence|116|125|PCMHIYHLDC
>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain
Query: 1 PCMHIYHLDC 10
PCMH + LDC
Sbjct: 61 PCMHKFCLDC 70
>sp|ICP0_BHV1K|E3 ubiquitin-protein ligase ICP0|Bovine herpesvirus 1.2 (strain K22)
Query: 1 PCMHIYHLDC 10
PC+H + L C
Sbjct: 28 PCLHAFCLAC 37
>sp|ICP0_BHV1C|E3 ubiquitin-protein ligase ICP0|Bovine herpesvirus 1.1 (strain
Query: 1 PCMHIYHLDC 10
PC+H + L C
Sbjct: 28 PCLHAFCLAC 37
>sp|POLG_ZYMVS|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 3 MHIYHLDC 10
MH+YH+ C
Sbjct: 1069 MHMYHIFC 1076
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+HIY+ DC
Sbjct: 107 IHIYYFDC 114
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+HIY+ DC
Sbjct: 107 IHIYYFDC 114
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+HIY+ DC
Sbjct: 107 IHIYYFDC 114
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+HIY+ DC
Sbjct: 107 IHIYYFDC 114
>sp|ENV_JSRV|ENVELOPE glycoprotein|Sheep pulmonary adenomatosis virus (Jaagsiekte
Query: 3 MHIYHLDC 10
++IYHL+C
Sbjct: 313 LNIYHLNC 320
>sp|TGB1_SMYEA|MOVEMENT and silencing protein TGBp1|Strawberry mild yellow
Query: 2 CMHIYHLD 9
C+H+ HLD
Sbjct: 63 CLHLRHLD 70
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 24 IHLYYFDC 31
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_SIVMB|VIRION infectivity factor|Simian immunodeficiency virus (isolate MB66)
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_SIVEK|VIRION infectivity factor|Simian immunodeficiency virus (isolate EK505)
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PCMHIYHLD 9
P H YH+D
Sbjct: 317 PASHPYHMD 325
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PCMHIYHLD 9
P H YH+D
Sbjct: 317 PASHPYHMD 325
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHMYYFDC 114
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 4 HIYHLD 9
HIYHL+
Sbjct: 843 HIYHLN 848
>sp|VIF_HV1EL|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHMYYFDC 114
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHMYYFDC 114
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|CAPSD_REOVL|INNER capsid protein lambda-1|Reovirus type 1 (strain Lang)
Query: 1 PCMHIYHLDC 10
P +HI+ DC
Sbjct: 1072 PGVHIFGRDC 1081
>sp|CAPSD_REOVD|INNER capsid protein lambda-1|Reovirus type 3 (strain Dearing)
Query: 1 PCMHIYHLDC 10
P +HI+ DC
Sbjct: 1072 PGVHIFGRDC 1081
>sp|VIF_HV1MA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHLYYFDC 114
>sp|VPK2_FOWPN|SERINE/THREONINE-PROTEIN kinase 2|Fowlpox virus (strain NVSL) (FPV)
Query: 1 PCMHIYHLD 9
PC + HLD
Sbjct: 299 PCSNFVHLD 307
>sp|ACPY1_BP010|ANTI-PYCSAR protein Apyc1|Bacillus phage 010DV004
Query: 1 PCMHIYHLD 9
P +H+ H+D
Sbjct: 153 PTVHVSHMD 161
>sp|50510_ASFB7|PROTEIN MGF 505-10R|African swine fever virus (strain
Query: 3 MHIYHLD 9
+HIYHL+
Sbjct: 185 LHIYHLE 191
>sp|VIE2_MUHVS|IMMEDIATE-EARLY protein 2|Murid herpesvirus 1 (strain Smith)
Query: 2 CMHIYHLDC 10
CM + LDC
Sbjct: 24 CMATFKLDC 32
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H+Y+ DC
Sbjct: 107 IHMYYFDC 114
>sp|POLG_ZYMVR|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 3 MHIYHL 8
MH+YH+
Sbjct: 1069 MHMYHI 1074
>sp|POLG_ZYMVC|GENOME polyprotein|Zucchini yellow mosaic virus (strain
Query: 3 MHIYHL 8
MH+YH+
Sbjct: 1066 MHMYHI 1071
>sp|APYC1_BPSBS|ANTI-PYCSAR protein Apyc1|Bacillus phage SBSphiJ
Query: 1 PCMHIYHLD 9
P +H+ H+D
Sbjct: 153 PTVHVSHMD 161
>sp|RPO1_MIMIV|DNA-DIRECTED RNA polymerase subunit 1|Acanthamoeba polyphaga mimivirus (APMV)
Query: 4 HIYHL 8
HIYHL
Sbjct: 427 HIYHL 431
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 MHIYHLDC 10
+H Y+ DC
Sbjct: 107 IHTYYFDC 114
>sp|YL084_MIMIV|UNCHARACTERIZED WD repeat-containing protein L84|Acanthamoeba polyphaga mimivirus
Query: 2 CMHIYHL 8
C HIY+L
Sbjct: 39 CQHIYYL 45
>sp|V204_FOWPN|UNCHARACTERIZED serpin-like protein FPV204|Fowlpox virus (strain NVSL) (FPV)
Query: 2 CMHIYHLDC 10
CM I++L C
Sbjct: 254 CMPIFNLGC 262
25|Sequence|121|130|YHLDCIDDWL
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 YHLDCIDDWL 10
Y LDCI D+L
Sbjct: 196 YPLDCIKDFL 205
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 YHLDCIDDWL 10
Y LDCI D+L
Sbjct: 196 YPLDCIKDFL 205
>sp|POLG_EHV|GENOME polyprotein|Edge Hill virus (EHV)
Query: 5 CIDDW 9
CIDDW
Sbjct: 3330 CIDDW 3334
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 YHLDCID 7
YH DC+D
Sbjct: 4357 YHPDCVD 4363
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 HLDCIDDW 9
H C+D+W
Sbjct: 433 HEQCVDNW 440
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 HLDCIDDW 9
H C+D+W
Sbjct: 433 HEQCVDNW 440
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 HLDCIDDW 9
H C+D+W
Sbjct: 433 HEQCVDNW 440
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 YHLDCIDDWL 10
Y C DDWL
Sbjct: 1974 YPSPCSDDWL 1983
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 YHLDCIDDWL 10
Y L+CI D+L
Sbjct: 196 YPLECIKDFL 205
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 YHLDCIDDWL 10
Y L+CI D+L
Sbjct: 196 YPLECIKDFL 205
>sp|MVP_CLVN|MOVEMENT protein BC1|African cassava mosaic virus (isolate
Query: 1 YHLDCIDDW 9
Y DC+D W
Sbjct: 164 YGPDCVDFW 172
>sp|MVP_CLVK|MOVEMENT protein BC1|African cassava mosaic virus (isolate
Query: 1 YHLDCIDDW 9
Y DC+D W
Sbjct: 164 YGPDCVDFW 172
>sp|Y053_NPVOP|UNCHARACTERIZED 17.0 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis
Query: 1 YHLDCIDDW 9
+H +CI+ W
Sbjct: 57 FHAECIERW 65
>sp|REV_HV1SE|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 HLDCIDD 8
HLDC +D
Sbjct: 82 HLDCSED 88
>sp|RBP_BPS16|RECEPTOR-RECOGNIZING protein gp38|Salmonella phage S16 (Salmonella phage
Query: 4 DCIDDWL 10
DCI +W+
Sbjct: 131 DCIHNWI 137
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 LDCIDDW 9
+DC+++W
Sbjct: 1349 VDCLEEW 1355
>sp|MIR1_MHV68|E3 ubiquitin-protein ligase MIR1|Murid herpesvirus 4 (MuHV-4)
Query: 2 HLDCIDDWL 10
H DC+ WL
Sbjct: 32 HQDCLRGWL 40
>sp|DPOL_MIMIV|DNA polymerase|Acanthamoeba polyphaga mimivirus (APMV)
Query: 5 CIDDW 9
C DDW
Sbjct: 1731 CTDDW 1735
>sp|1A_BBMV|REPLICATION protein 1a|Broad bean mottle virus
Query: 2 HLDCIDDW 9
H DCID +
Sbjct: 91 HYDCIDSF 98
>sp|Y111_ATV|UNCHARACTERIZED protein ORF111|Acidianus two-tailed virus (ATV)
Query: 1 YHLDCID 7
Y LDC D
Sbjct: 81 YQLDCFD 87
>sp|POL_WDSV|GAG-POL polyprotein|Walleye dermal sarcoma virus (WDSV)
Query: 1 YHLDCIDDW 9
YH +D W
Sbjct: 1670 YHQQVVDQW 1678
>sp|CAPSD_CYLCV|CAPSID protein|Cestrum yellow leaf curling virus
Query: 2 HLDCIDD 8
+LDCID+
Sbjct: 153 NLDCIDN 159
>sp|165R_IIV6|PUTATIVE metalloproteinase 165R|Invertebrate iridescent virus 6 (IIV-6)
Query: 2 HLDCIDDW 9
HLD +DW
Sbjct: 75 HLDYDEDW 82
>sp|DNRE_BPT4|DNA replication protein|Enterobacteria phage T4 (Bacteriophage T4)
Query: 4 DCIDD 8
DCIDD
Sbjct: 74 DCIDD 78
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 4 DCIDD 8
DCIDD
Sbjct: 49 DCIDD 53
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 HLDCIDDWL 10
+LDC+ D+L
Sbjct: 494 NLDCLRDYL 502
>sp|UBC4_MIMIV|PROBABLE bifunctional E2/E3 enzyme R795|Acanthamoeba polyphaga mimivirus
Query: 1 YHLDCIDDWL 10
+H CI WL
Sbjct: 109 FHACCISRWL 118
>sp|R1AB_PEDV7|REPLICASE polyprotein 1ab|Porcine epidemic diarrhea virus (strain
Query: 1 YHLDCID 7
YH +C+D
Sbjct: 4389 YHPNCVD 4395
>sp|POL1_RCMV|RNA1 polyprotein|Red clover mottle virus (RCMV)
Query: 1 YHLDCIDD 8
YH C++D
Sbjct: 1023 YHSSCLED 1030
>sp|ENV_FIVPE|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Petaluma)
Query: 2 HLDCIDDWL 10
+LD +D WL
Sbjct: 285 YLDRVDTWL 293
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 2 HLDCIDDWL 10
H C+ WL
Sbjct: 34 HRSCLSTWL 42
>sp|ENV_FIVU8|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain UK8)
Query: 2 HLDCIDDWL 10
+LD +D WL
Sbjct: 285 YLDRVDTWL 293
>sp|ENV_FIVWO|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate Wo)
Query: 2 HLDCIDDWL 10
+LD +D WL
Sbjct: 283 YLDRVDTWL 291
26|Sequence|126|135|IDDWLMRSFT
>sp|SIGM1_REOVJ|OUTER capsid protein sigma-1|Reovirus type 2 (strain D5/Jones)
Query: 1 IDDWLMRSFT 10
+DDWL+ SFT
Sbjct: 354 VDDWLILSFT 363
>sp|SIGM1_REOVL|OUTER capsid protein sigma-1|Reovirus type 1 (strain Lang)
Query: 1 IDDWLMRSFT 10
+DDWL+ SF+
Sbjct: 361 VDDWLVLSFS 370
>sp|ENV_SIVS4|ENVELOPE glycoprotein gp160|Simian immunodeficiency virus (isolate
Query: 3 DWLMRSF 9
DWL+RS+
Sbjct: 795 DWLLRSY 801
>sp|L_LATVB|RNA-DIRECTED RNA polymerase L|Latino mammarenavirus (isolate Rat/Bolivia/MARU
Query: 1 IDDWLMRSF 9
+DDW++ F
Sbjct: 152 VDDWVIERF 160
>sp|L_OLVVA|RNA-DIRECTED RNA polymerase L|Oliveros mammarenavirus (isolate
Query: 1 IDDWLMRSF 9
+DDW++ F
Sbjct: 152 VDDWVIERF 160
>sp|RDRP_GRVMC|RNA-DIRECTED RNA polymerase|Groundnut rosette virus (strain MC1)
Query: 1 IDDWLMRSFT 10
I DWL +FT
Sbjct: 7 IMDWLRPTFT 16
>sp|SCAF_EHV2|CAPSID scaffolding protein|Equine herpesvirus 2 (strain 86/87)
Query: 3 DWLMRSFT 10
DW++ FT
Sbjct: 194 DWILSKFT 201
>sp|RDRP_YOMV|REPLICASE large subunit|Youcai mosaic virus (YoMV)
Query: 1 IDDWL 5
IDDWL
Sbjct: 1396 IDDWL 1400
>sp|VP2_AHSV|OUTER capsid protein VP2|African horse sickness virus (AHSV)
Query: 1 IDDWLMRSFT 10
I+DWL++ T
Sbjct: 237 INDWLLKEKT 246
27|Sequence|131|140|MRSFTCPSCM
>sp|Y383B_ATV|TNPB-LIKE protein ORF383B|Acidianus two-tailed virus (ATV)
Query: 2 RSFTCPSC 9
R F CPSC
Sbjct: 341 RYFHCPSC 348
>sp|Y383A_ATV|TNPB-LIKE protein ORF383a|Acidianus two-tailed virus (ATV)
Query: 2 RSFTCPSC 9
R F CPSC
Sbjct: 341 RYFHCPSC 348
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 2 RSFTCPSCM 10
R +CPSCM
Sbjct: 2250 RYRSCPSCM 2258
>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry
Query: 1 MRSFTCPSCM 10
MRS T P C+
Sbjct: 126 MRSMTAPQCI 135
Query: 4 FTCPSC 9
F CPSC
Sbjct: 450 FICPSC 455
>sp|Y409_ATV|TNPB-LIKE protein ORF409|Acidianus two-tailed virus (ATV)
Query: 2 RSFTCPSC 9
R F CP C
Sbjct: 348 RIFVCPKC 355
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|POLG_FCV|GENOME polyprotein|Feline calicivirus (FCV)
Query: 1 MRSFTCPSC 9
MR+ CPSC
Sbjct: 43 MRAEACPSC 51
>sp|VE1_BPV1|REPLICATION protein E1|Bovine papillomavirus type 1
Query: 1 MRSFTCPS 8
MR+FTC +
Sbjct: 591 MRTFTCSA 598
>sp|POLG_FCVF4|GENOME polyprotein|Feline calicivirus (strain Japanese F4)
Query: 1 MRSFTCPSC 9
MR+ CPSC
Sbjct: 43 MRAEACPSC 51
>sp|POLG_FCVC6|GENOME polyprotein|Feline calicivirus (strain CFI/68 FIV)
Query: 1 MRSFTCPSC 9
MR+ CPSC
Sbjct: 43 MRAEACPSC 51
>sp|GLRX1_CAMPS|GLUTAREDOXIN-1 virus (strain CMS)
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|GLRX1_CAMPM|GLUTAREDOXIN-1 virus (strain M-96)
Query: 4 FTCPSC 9
FTCP C
Sbjct: 21 FTCPFC 26
>sp|VE1_BPV2|REPLICATION protein E1|Bos taurus papillomavirus 2 (Bovine
Query: 1 MRSFTCPS 8
MR+FTC +
Sbjct: 590 MRTFTCSA 597
>sp|TAP51_BPT4|BASEPLATE hub assembly protein gp51|Enterobacteria phage T4 (Bacteriophage
Query: 3 SFTCPSC 9
+F CP C
Sbjct: 82 TFICPKC 88
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 MRSFTCPSC 9
M F+CP C
Sbjct: 381 MDGFSCPLC 389
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 MRSFTCPSC 9
M F+CP C
Sbjct: 381 MDGFSCPLC 389
>sp|POLG_CSFVB|GENOME polyprotein|Classical swine fever virus (strain
Query: 2 RSFTCPSC 9
R TCP C
Sbjct: 1496 RGETCPKC 1503
>sp|POLG_CSFAT|GENOME polyprotein|Classical swine fever virus (strain
Query: 2 RSFTCPSC 9
R TCP C
Sbjct: 1496 RGETCPKC 1503
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 MRSFTCPSC 9
M F+CP C
Sbjct: 381 MDGFSCPLC 389
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 MRSFTCPSC 9
M F+CP C
Sbjct: 381 MDGFSCPLC 389
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 MRSFTCPSC 9
M F+CP C
Sbjct: 381 MDGFSCPLC 389
>sp|L_ALLVP|RNA-DIRECTED RNA polymerase L|Allpahuayo mammarenavirus (isolate
Query: 3 SFTCPSC 9
+F CP+C
Sbjct: 284 TFDCPNC 290
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 MRSFTCPSC 9
M F+CP C
Sbjct: 381 MDGFSCPLC 389
>sp|POLG_PVYN|GENOME polyprotein|Potato virus Y (strain N)
Query: 5 TCPSC 9
TCP+C
Sbjct: 336 TCPTC 340
>sp|POLG_PVYHU|GENOME polyprotein|Potato virus Y (strain Hungarian)
Query: 5 TCPSC 9
TCP+C
Sbjct: 336 TCPTC 340
>sp|EXO2_BPR69|EXONUCLEASE subunit 2|Escherichia phage RB69 (Bacteriophage RB69)
Query: 5 TCPSC 9
TCP+C
Sbjct: 287 TCPTC 291
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 SFTCPSC 9
SF CP C
Sbjct: 50 SFPCPFC 56
>sp|POLG_PVYO|GENOME polyprotein|Potato virus Y (strain O)
Query: 5 TCPSC 9
TCP+C
Sbjct: 336 TCPTC 340
>sp|POLG_PVYC|GENOME polyprotein|Potato virus Y (strain C)
Query: 5 TCPSC 9
TCP+C
Sbjct: 336 TCPTC 340
>sp|MVP_PVYN|P3N-PIPO polyprotein|Potato virus Y (strain N)
Query: 5 TCPSC 9
TCP+C
Sbjct: 336 TCPTC 340
>sp|POLG_VESVA|GENOME polyprotein|Vesicular exanthema of swine virus
Query: 5 TCPSC 9
TCP+C
Sbjct: 158 TCPNC 162
>sp|POLG_TUMVQ|GENOME polyprotein|Turnip mosaic virus (strain Quebec)
Query: 5 TCPSCM 10
TCP C+
Sbjct: 416 TCPDCV 421
>sp|POLG_TUMVJ|GENOME polyprotein|Turnip mosaic virus (strain Japanese)
Query: 5 TCPSCM 10
TCP C+
Sbjct: 416 TCPDCV 421
>sp|MVP_TUMVJ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Japanese)
Query: 5 TCPSCM 10
TCP C+
Sbjct: 416 TCPDCV 421
>sp|R1AB_CVM2|REPLICASE polyprotein 1ab|Murine coronavirus (strain 2) (MHV-2)
Query: 1 MRSFTCPSC 9
M F CP C
Sbjct: 406 MDGFLCPGC 414
>sp|R1AB_CVMA5|REPLICASE polyprotein 1ab|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 MRSFTCPSC 9
M F CP C
Sbjct: 406 MDGFPCPGC 414
>sp|MVP_TUMVQ|P3N-PIPO polyprotein|Turnip mosaic virus (strain Quebec)
Query: 5 TCPSCM 10
TCP C+
Sbjct: 416 TCPDCV 421
>sp|DPOL_ADES1|DNA polymerase|Snake adenovirus serotype 1 (SnAdV-1)
Query: 1 MRSFTCPSC 9
++ TCPSC
Sbjct: 956 LKDTTCPSC 964
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 MRSFTCPSC 9
++ CPSC
Sbjct: 1073 LKCLRCPSC 1081
>sp|POLG_SMSV1|GENOME polyprotein|San Miguel sea lion virus
Query: 5 TCPSC 9
TCP+C
Sbjct: 158 TCPNC 162
>sp|R1AB_CVMJH|REPLICASE polyprotein 1ab|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 MRSFTCPSC 9
M F CP C
Sbjct: 406 MDGFPCPGC 414
>sp|GLRX1_ECTVM|GLUTAREDOXIN-1 virus (strain Moscow) (ECTV)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|DPOL_ADECC|DNA polymerase|Canine adenovirus serotype 1 (strain
Query: 1 MRSFTCPSC 9
++ TCP C
Sbjct: 1031 LKDTTCPEC 1039
>sp|R1A_CVM2|REPLICASE polyprotein 1a|Murine coronavirus (strain 2) (MHV-2)
Query: 1 MRSFTCPSC 9
M F CP C
Sbjct: 406 MDGFLCPGC 414
>sp|MVP_PVYHU|P3N-PIPO polyprotein|Potato virus Y (strain Hungarian)
Query: 5 TCPSC 9
TCP+C
Sbjct: 336 TCPTC 340
>sp|GLRX1_VACCW|GLUTAREDOXIN-1 virus (strain Western Reserve)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|GLRX1_RABPU|GLUTAREDOXIN-1 virus (strain Utrecht) (RPV)
Query: 4 FTCPSC 9
+TCP C
Sbjct: 21 YTCPFC 26
>sp|R1A_CVMJH|REPLICASE polyprotein 1a|Murine coronavirus (strain JHM) (MHV-JHM)
Query: 1 MRSFTCPSC 9
M F CP C
Sbjct: 406 MDGFPCPGC 414
>sp|R1A_CVMA5|REPLICASE polyprotein 1a|Murine coronavirus (strain A59) (MHV-A59)
Query: 1 MRSFTCPSC 9
M F CP C
Sbjct: 406 MDGFPCPGC 414
>sp|YR811_MIMIV|PUTATIVE ariadne-like RING finger protein|Acanthamoeba polyphaga mimivirus
Query: 3 SFTCPSCM 10
+F CP C+
Sbjct: 699 TFVCPQCV 706
>sp|DPOL_ADECT|DNA polymerase|Canine adenovirus serotype 2 (strain
Query: 1 MRSFTCPSC 9
++ TCP C
Sbjct: 1032 LKDTTCPKC 1040
>sp|DPOL_ADEB3|DNA polymerase|Bovine adenovirus B serotype 3
Query: 1 MRSFTCPSC 9
+++ CPSC
Sbjct: 1048 LKNIYCPSC 1056
>sp|POLG_FCVF9|GENOME polyprotein|Feline calicivirus (strain F9) (FCV)
Query: 1 MRSFTCPSC 9
+R+ CPSC
Sbjct: 43 IRAEACPSC 51
>sp|POLG_FCVUR|GENOME polyprotein|Feline calicivirus (strain Cat/United
Query: 1 MRSFTCPSC 9
+R+ CPSC
Sbjct: 43 IRAEACPSC 51
28|Sequence|136|145|CPSCMEPVDA
>sp|YR311_MIMIV|PUTATIVE RING finger protein R311|Acanthamoeba polyphaga mimivirus (APMV)
Query: 1 CPSCMEPVD 9
CP CMEP++
Sbjct: 536 CPLCMEPIN 544
>sp|VF050_IIV6|UNCHARACTERIZED protein 050L|Invertebrate iridescent virus 6 (IIV-6)
Query: 1 CPSCMEPV 8
CP C+ P+
Sbjct: 535 CPKCLHPL 542
>sp|R1AB_AMV79|REPLICASE polyprotein 1ab|Alphamesonivirus 1 (isolate Aedes harrisoni/Cote
Query: 1 CPSCM 5
CPSCM
Sbjct: 2254 CPSCM 2258
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CPSCMEPVD 9
C SC+ P++
Sbjct: 1299 CKSCLRPIE 1307
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CPSCMEPVD 9
C SC+ P++
Sbjct: 1299 CKSCLRPIE 1307
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CPSCMEPVD 9
C SC+ P++
Sbjct: 1299 CKSCLRPIE 1307
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CPSCMEPVD 9
C SC+ P++
Sbjct: 1299 CKSCLRPIE 1307
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CPSCMEPVD 9
C SC+ P++
Sbjct: 1299 CKSCLRPIE 1307
>sp|L_LNYV3|RNA-DIRECTED RNA polymerase L|Lettuce necrotic yellows virus (isolate
Query: 1 CPSCMEPVD 9
C SC+ P+D
Sbjct: 1291 CYSCINPLD 1299
>sp|GCVK_SHV21|PROBABLE ganciclovir kinase|Saimiriine herpesvirus 2 (strain 11)
Query: 1 CPSCMEP 7
CP C++P
Sbjct: 29 CPECLQP 35
>sp|R1A_BC279|REPLICASE polyprotein 1a|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1AB_BC279|REPLICASE polyprotein 1ab|Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1A_BCRP3|REPLICASE polyprotein 1a|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1AB_BCRP3|REPLICASE polyprotein 1ab|Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004)
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1AB_BCHK3|REPLICASE polyprotein 1ab|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|R1A_BCHK3|REPLICASE polyprotein 1a|Bat coronavirus HKU3 (BtCoV) (SARS-like
Query: 1 CPSCMEP 7
CP+C +P
Sbjct: 370 CPACQDP 376
>sp|L_DMSVA|RNA-DIRECTED RNA polymerase L|Drosophila melanogaster sigma virus (isolate
Query: 1 CPSCMEPV 8
C SC+ P+
Sbjct: 1304 CTSCLRPI 1311
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 CPSCMEPVDA 10
CP C+ P +A
Sbjct: 575 CPYCLNPTEA 584
>sp|GP_PHV|ENVELOPMENT polyprotein|Prospect Hill virus (PHV)
Query: 1 CPSCMEPVDA 10
CP CM P ++
Sbjct: 576 CPYCMNPTES 585
>sp|CAPSD_TOBSV|CAPSID protein|Tobacco streak virus (strain WC)
Query: 1 CPSCMEPVDA 10
CP+C++ +DA
Sbjct: 28 CPTCIDELDA 37
>sp|YL698_MIMIV|UNCHARACTERIZED protein L698|Acanthamoeba polyphaga mimivirus (APMV)
Query: 2 PSCMEP 7
PSC+EP
Sbjct: 192 PSCVEP 197
>sp|GE_BHV1S|ENVELOPE glycoprotein E|Bovine herpesvirus 1.2 (strain ST)
Query: 1 CPSCMEPVDA 10
P+C+ P DA
Sbjct: 285 APACLHPADA 294
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 CPSCMEPVDA 10
CP C+ P +A
Sbjct: 580 CPYCLNPSEA 589
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 CPSCMEPVDA 10
CP C+ P +A
Sbjct: 580 CPYCLNPSEA 589
>sp|V216_FOWPN|PUTATIVE ankyrin repeat protein FPV216|Fowlpox virus (strain NVSL) (FPV)
Query: 1 CPSCME 6
CP C+E
Sbjct: 120 CPKCVE 125
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 CPSCMEPVDA 10
CP C+ P +A
Sbjct: 580 CPYCLNPSEA 589
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 CPSCMEPVDA 10
CP C+ P +A
Sbjct: 580 CPYCLNPSEA 589
>sp|GE_SUHVR|ENVELOPE glycoprotein E|Suid herpesvirus 1 (strain Rice)
Query: 1 CPSCMEPVD 9
P C+ PVD
Sbjct: 289 APECLRPVD 297
>sp|Y038_OSHVF|PUTATIVE RING finger protein ORF38|Ostreid herpesvirus 1 (isolate France)
Query: 1 CPSCMEPVDA 10
CP C EP +A
Sbjct: 46 CPVCREPWEA 55
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 CPSCMEPVD 9
CP +EP +
Sbjct: 439 CPDAVEPTE 447
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 CPSCMEPVD 9
CP+C+ D
Sbjct: 69 CPNCLNCTD 77
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 CPSCMEPVD 9
CP+C+ D
Sbjct: 69 CPNCLNCTD 77
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 CPSCMEPVD 9
CP+C+ D
Sbjct: 59 CPNCLNCTD 67
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 CPSCMEPVD 9
CP+C+ D
Sbjct: 69 CPNCLNCTD 77
>sp|UB222_WSSVS|RING finger containing E3 ubiquitin-protein|White spot syndrome virus
Query: 1 CPSCMEPV 8
CP C E V
Sbjct: 355 CPMCREDV 362
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 CPSCMEPVD 9
CP+C+ D
Sbjct: 62 CPNCLNCTD 70
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 CPSCMEPVD 9
CP+C+ D
Sbjct: 62 CPNCLNCTD 70
29|Sequence|141|154|EPVDAALLSSYETN
>sp|DPOL1_BPK32|DEPOLYMERASE 1, capsule K3-specific|Klebsiella phage KP32 (Bacteriophage KP32)
Query: 1 EPVDAALLSSYET 13
+P+D ALL ++ET
Sbjct: 779 KPIDEALLDAWET 791
>sp|ALT2B_ENMGO|PROTEIN 2B*|Mengo encephalomyocarditis virus
Query: 2 PVDAALLSSYETN 14
P+DAALL S +++
Sbjct: 103 PLDAALLGSLDSS 115
>sp|US03_EHV1V|SERINE/THREONINE-PROTEIN kinase US3 homolog|Equine herpesvirus 1 (strain V592)
Query: 1 EPVDAALLSSYETN 14
EP D L + ETN
Sbjct: 235 EPADLGLAGTVETN 248
>sp|US03_EHV1B|SERINE/THREONINE-PROTEIN kinase US3 homolog|Equine herpesvirus 1 (strain Ab4p)
Query: 1 EPVDAALLSSYETN 14
EP D L + ETN
Sbjct: 235 EPADLGLAGTVETN 248
>sp|KR1_EHV1K|SERINE/THREONINE-PROTEIN kinase|Equine herpesvirus 1 (strain Kentucky
Query: 1 EPVDAALLSSYETN 14
EP D L + ETN
Sbjct: 235 EPADLGLAGTVETN 248
>sp|TRM1_SUHVF|TRIPARTITE terminase subunit 1|Suid herpesvirus 1 (strain Indiana-Funkhauser
Query: 2 PVDAALLSS 10
PVDAALL +
Sbjct: 552 PVDAALLPA 560
>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)
Query: 1 EPVDAALLSSYETN 14
EPV + S Y TN
Sbjct: 3078 EPVSFHVASGYRTN 3091
>sp|CAPSD_MNSV|CAPSID protein|Melon necrotic spot virus (MNSV)
Query: 2 PVDAALLSSY 11
P+D A +SSY
Sbjct: 182 PIDRAAISSY 191
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 EPVDAALLSSYET 13
EPV +L +Y+T
Sbjct: 186 EPVRKKILRAYDT 198
>sp|PORTL_LAMBD|PORTAL protein B|Escherichia phage lambda (Bacteriophage lambda)
Query: 1 EPVDAALLSSY 11
E VDAALL ++
Sbjct: 43 ESVDAALLPNF 53
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 7 LLSSYETN 14
LS+YETN
Sbjct: 815 FLSAYETN 822
>sp|CAPSD_BPPM2|MAJOR capsid protein P2|Pseudoalteromonas phage PM2 (Bacteriophage PM2)
Query: 3 VDAALLSSYET 13
+D LLS+Y+T
Sbjct: 51 LDGRLLSTYKT 61
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 7 LLSSYETN 14
LS+YETN
Sbjct: 815 FLSAYETN 822