RNF11_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|STPSKLCNGM

>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 1 STPSKLCNGM 10
S P KLC M
Sbjct: 126 SGPGKLCGAM 135


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 1 STPSKLCNGM 10
S P +LC G+
Sbjct: 319 SAPDELCKGV 328




2|SequenceR|15|6|LSIDDSTPSK

>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 LSIDDSTPSK 10
+ IDD TP K
Sbjct: 556 VRIDDVTPEK 565


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 LSIDDSTPSK 10
L ID++ P+K
Sbjct: 224 LEIDENAPAK 233




3|SequenceR|20|11|QSEHLLSIDD

>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 SEHLLSIDD 10
SEHL +DD
Sbjct: 112 SEHLFPVDD 120


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 SEHLLSID 9
SE+LL+ID
Sbjct: 306 SEYLLAID 313


>sp|MVK_AERPE|MEVALONATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 EHLLSIDD 10
EH+LSI D
Sbjct: 200 EHVLSIAD 207


>sp|P845_THEAC|PHOSPHATASE Ta0845|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QSEHLLSIDD 10
Q +H+++IDD
Sbjct: 117 QVDHVVTIDD 126


>sp|AATC_THEVO|A-TYPE ATP synthase subunit C|Thermoplasma volcanium (strain ATCC 51530

Query: 3 EHLLSID 9
EHL+S+D
Sbjct: 26 EHLISLD 32




4|SequenceR|25|16|SARDSQSEHL

>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 RDSQSEHL 10
RD +SEHL
Sbjct: 113 RDKKSEHL 120




5|SequenceR|30|21|TGEGFSARDS

>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 1 TGEGFSARDS 10
TGE F+ RD+
Sbjct: 281 TGEAFAVRDT 290


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GEGFSARDS 10
GEGFS +D+
Sbjct: 200 GEGFSKKDA 208


>sp|IDI2_METJA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GEGFSARDS 10
GEGFS D+
Sbjct: 202 GEGFSKEDA 210


>sp|IDI2_META3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GEGFSARDS 10
GEGFS D+
Sbjct: 204 GEGFSKEDA 212


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 1 TGEGFSARDS 10
TG GFS D+
Sbjct: 191 TGSGFSKEDA 200


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain

Query: 2 GEGFSARDS 10
+GF+ RDS
Sbjct: 87 AQGFTGRDS 95


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 3 EGFSARDS 10
+GF+ RDS
Sbjct: 88 QGFTGRDS 95


>sp|PYRF_METBF|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina barkeri (strain Fusaro

Query: 3 EGFSARDS 10
+GF+ RDS
Sbjct: 88 QGFTGRDS 95




6|SequenceR|35|26|EQDPETGEGF

>sp|CREN7_STAMF|CHROMATIN protein Cren7|Staphylothermus marinus (strain ATCC 43588

Query: 2 QDPETGEGF 10
QDPETG+ F
Sbjct: 42 QDPETGKYF 50


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM

Query: 1 EQDPETGEGF 10
+ DPETG+
Sbjct: 84 QHDPETGQSL 93


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QDPETGE 8
+DPETGE
Sbjct: 156 KDPETGE 162


>sp|RS13_PYRIL|SMALL ribosomal subunit protein uS13|Pyrobaculum islandicum (strain DSM

Query: 2 QDPETGE 8
+DPETG+
Sbjct: 83 KDPETGK 89


>sp|RL31_HYPBU|LARGE ribosomal subunit protein eL31|Hyperthermus butylicus (strain DSM

Query: 2 QDPETGE 8
+DPETG+
Sbjct: 76 KDPETGK 82


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 2 QDPETGEGF 10
+DP+TG+G
Sbjct: 32 RDPDTGQGI 40


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DPETGEG 9
DPE G+G
Sbjct: 316 DPEKGDG 322


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 DPETGE 8
DPETGE
Sbjct: 316 DPETGE 321


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 DPETGE 8
DPETGE
Sbjct: 323 DPETGE 328


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 3 DPETGEGF 10
DPETG+ +
Sbjct: 110 DPETGKPY 117


>sp|RS13_PYRCJ|SMALL ribosomal subunit protein uS13|Pyrobaculum calidifontis (strain

Query: 2 QDPETG 7
+DPETG
Sbjct: 83 KDPETG 88


>sp|RS13_PYRAR|SMALL ribosomal subunit protein uS13|Pyrobaculum arsenaticum (strain

Query: 2 QDPETG 7
+DPETG
Sbjct: 83 KDPETG 88


>sp|RS13_PYRAE|SMALL ribosomal subunit protein uS13|Pyrobaculum aerophilum (strain

Query: 2 QDPETG 7
+DPETG
Sbjct: 83 KDPETG 88


>sp|PSB1_THEPD|PROTEASOME subunit beta 1|Thermofilum pendens (strain DSM 2475

Query: 2 QDPETGEG 9
+DP +GEG
Sbjct: 177 RDPGSGEG 184


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EQDPETGEG 9
EQ+P TG+G
Sbjct: 266 EQNPVTGKG 274


>sp|RS13_NANEQ|SMALL ribosomal subunit protein uS13|Nanoarchaeum equitans (strain

Query: 2 QDPETGE 8
+DPETG+
Sbjct: 89 RDPETGK 95


>sp|SYW_THEON|TRYPTOPHAN--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 QDPETGEGF 10
QD E+G+GF
Sbjct: 65 QDYESGKGF 73


>sp|CFBA_METBU|SIROHYDROCHLORIN cobaltochelatase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DPETGEG 9
DPET EG
Sbjct: 90 DPETNEG 96


>sp|DNLI_PYRAY|DNA ligase|Pyrococcus abyssi

Query: 3 DPETGE 8
DPETGE
Sbjct: 455 DPETGE 460


>sp|DNLI_PYRFU|DNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DPETGE 8
DPETGE
Sbjct: 455 DPETGE 460


>sp|DNLI_PYRAB|DNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 DPETGE 8
DPETGE
Sbjct: 455 DPETGE 460


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 DPETGE 8
DPETG+
Sbjct: 656 DPETGD 661


>sp|NNR_PYRAE|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Pyrobaculum aerophilum (strain

Query: 3 DPETGE 8
DP+TGE
Sbjct: 166 DPDTGE 171


>sp|Y417_ARCFU|UNCHARACTERIZED protein AF_0417|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EQDPETGE 8
E DPETG+
Sbjct: 63 ELDPETGD 70


>sp|DNLI_PYRHO|DNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DPETGE 8
DPETGE
Sbjct: 455 DPETGE 460


>sp|Y1251_PYRAB|RUTC family protein PYRAB12510|Pyrococcus abyssi (strain GE5 /

Query: 3 DPETGE 8
DPETGE
Sbjct: 37 DPETGE 42


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 3 DPETGEGF 10
DPE GEG
Sbjct: 135 DPERGEGL 142


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EQDPETGEG 9
EQ+P TG+G
Sbjct: 384 EQNPITGKG 392


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 DPETGE 8
DP+TGE
Sbjct: 319 DPDTGE 324


>sp|RS6E_HALLT|SMALL ribosomal subunit protein eS6|Halorubrum lacusprofundi (strain

Query: 3 DPETGEGF 10
DP TGE F
Sbjct: 10 DPNTGETF 17


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DPETGEGF 10
DPETG+ +
Sbjct: 129 DPETGKHY 136


>sp|RS6E_METMJ|SMALL ribosomal subunit protein eS6|Methanoculleus marisnigri (strain

Query: 2 QDPETGEGF 10
DPETG +
Sbjct: 9 SDPETGRSY 17


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DPETGE 8
DPETGE
Sbjct: 69 DPETGE 74


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 3 DPETGE 8
DPETGE
Sbjct: 294 DPETGE 299


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 QDPETGEGF 10
QDP+TG
Sbjct: 277 QDPKTGNSL 285


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 QDPETGEG 9
++PETG+G
Sbjct: 288 RNPETGKG 295


>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 DPETGE 8
DP+TGE
Sbjct: 306 DPDTGE 311


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 2 QDPETGEG 9
++PETG+G
Sbjct: 291 RNPETGKG 298


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EQDPETGE 8
E++PE GE
Sbjct: 194 EKNPEVGE 201


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 DPETGE 8
DP+TGE
Sbjct: 306 DPDTGE 311


>sp|CREN7_SACSH|CHROMATIN protein Cren7|Saccharolobus shibatae (strain ATCC 51178

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|CREN7_SACI7|CHROMATIN protein Cren7|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|CREN7_SACI6|CHROMATIN protein Cren7|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|CREN7_SACI4|CHROMATIN protein Cren7|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|CREN7_SACI3|CHROMATIN protein Cren7|Saccharolobus islandicus (strain M.16.27)

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|CREN7_SACI2|CHROMATIN protein Cren7|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|CREN7_SACI1|CHROMATIN protein Cren7|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 42 KDPETGKYF 50


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 2 QDPETG 7
+DPETG
Sbjct: 122 RDPETG 127


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DPETGE 8
DPE+GE
Sbjct: 315 DPESGE 320


>sp|RS8E_METTH|SMALL ribosomal subunit protein eS8|Methanothermobacter

Query: 3 DPETGE 8
DPETG+
Sbjct: 66 DPETGK 71


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 DPETGE 8
DP+TGE
Sbjct: 320 DPDTGE 325


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 QDPETGE 8
+DPE+GE
Sbjct: 437 RDPESGE 443


>sp|CREN7_SULTO|CHROMATIN protein Cren7|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 QDPETGEGF 10
+DPETG+ F
Sbjct: 43 KDPETGKYF 51


>sp|GLYA_HALWD|SERINE hydroxymethyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EQDPETG 7
E DPETG
Sbjct: 144 EVDPETG 150


>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EQDPETG 7
+ DPETG
Sbjct: 406 DADPETG 412




7|SequenceR|40|31|YPPPPEQDPE

>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PPPPEQD 8
PPPPE D
Sbjct: 156 PPPPELD 162


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 YPPPPEQD 8
YP PPE D
Sbjct: 370 YPVPPEID 377


>sp|PGK_HALMA|PHOSPHOGLYCERATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 5 PEQDPE 10
PE+DPE
Sbjct: 122 PEEDPE 127


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPPEQDP 9
P PE+DP
Sbjct: 172 PNPERDP 178


>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PPPPEQDPE 10
PP E DP+
Sbjct: 175 PPASEYDPD 183


>sp|RL1_THEAC|LARGE ribosomal subunit protein uL1|Thermoplasma acidophilum (strain ATCC

Query: 2 PPPPEQDP 9
P PP QDP
Sbjct: 132 PIPPGQDP 139


>sp|PGK_HALVA|PHOSPHOGLYCERATE kinase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 5 PEQDPE 10
PE+DPE
Sbjct: 123 PEEDPE 128


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPPPEQ 7
PP PEQ
Sbjct: 225 PPAPEQ 230


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 2 PPPPEQ 7
PP PEQ
Sbjct: 225 PPAPEQ 230


>sp|SYS2_META3|TYPE-2 serine--tRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YPPPPEQDPE 10
Y PP++DPE
Sbjct: 276 YVSPPKRDPE 285


>sp|RL1_PICTO|LARGE ribosomal subunit protein uL1|Picrophilus torridus (strain ATCC

Query: 2 PPPPEQDP 9
P PP QDP
Sbjct: 127 PVPPGQDP 134


>sp|Y1542_METKA|UPF0173 metal-dependent hydrolase MK1542|Methanopyrus kandleri (strain AV19

Query: 3 PPPEQDPE 10
PP EQDPE
Sbjct: 197 PPIEQDPE 204


>sp|RL1_THEVO|LARGE ribosomal subunit protein uL1|Thermoplasma volcanium (strain ATCC

Query: 2 PPPPEQDP 9
P PP QDP
Sbjct: 132 PIPPGQDP 139


>sp|RTCA_IGNH4|RNA 3'-terminal phosphate cyclase|Ignicoccus hospitalis (strain KIN4/I

Query: 4 PPEQDP 9
PPE+DP
Sbjct: 229 PPERDP 234


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YPPPPEQDPE 10
YP PE+D E
Sbjct: 342 YPENPEKDSE 351


>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YPPPP 5
YPPPP
Sbjct: 225 YPPPP 229


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPPEQDP 9
P PE+DP
Sbjct: 178 PEPEKDP 184


>sp|NTPPA_METAC|DTTP/UTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PPPPEQDPE 10
PP P DPE
Sbjct: 35 PPQPGLDPE 43


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YPPPPEQDPE 10
YP PE+D E
Sbjct: 344 YPDNPEKDSE 353


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YPPPPEQDPE 10
YP P E+D E
Sbjct: 296 YPDPRERDVE 305


>sp|RL4_METMA|LARGE ribosomal subunit protein uL4|Methanosarcina mazei (strain ATCC

Query: 1 YPPPPEQD 8
+PP PE D
Sbjct: 93 HPPKPEAD 100


>sp|PYRH_METTP|URIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YPPPPEQDP 9
Y PE+DP
Sbjct: 144 YTSDPEKDP 152


>sp|RL4_METAC|LARGE ribosomal subunit protein uL4|Methanosarcina acetivorans (strain

Query: 1 YPPPPEQD 8
+PP PE D
Sbjct: 93 HPPKPEAD 100


>sp|TRPB1_AERPE|TRYPTOPHAN synthase beta chain 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPPPEQDPE 10
P PP +DPE
Sbjct: 18 PLPPLRDPE 26


>sp|RL4_METBF|LARGE ribosomal subunit protein uL4|Methanosarcina barkeri (strain Fusaro

Query: 1 YPPPPEQD 8
+PP PE D
Sbjct: 93 HPPKPEAD 100


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 5 PEQDP 9
PEQDP
Sbjct: 43 PEQDP 47


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YPPPPEQD 8
YPP PE D
Sbjct: 110 YPPTPELD 117


>sp|CAS1_METKA|CRISPR-ASSOCIATED endonuclease Cas1|Methanopyrus kandleri (strain AV19 /

Query: 2 PPPPEQDPE 10
P P E DPE
Sbjct: 312 PEPLEFDPE 320


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 3 PPPEQDPE 10
PP QDPE
Sbjct: 194 PPIAQDPE 201


>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 YPPPPEQDPE 10
Y PP++DPE
Sbjct: 271 YVCPPKRDPE 280


>sp|Y779_METS3|UPF0173 metal-dependent hydrolase Msm_0779|Methanobrevibacter smithii

Query: 3 PPPEQDP 9
PP EQDP
Sbjct: 199 PPIEQDP 205


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 YPPPPEQDP 9
+ P PE DP
Sbjct: 197 FIPTPEHDP 205


>sp|HEM3_PYRIL|PROBABLE porphobilinogen deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PPPPEQ 7
PPPP Q
Sbjct: 192 PPPPGQ 197


>sp|HEM3_PYRAR|PROBABLE porphobilinogen deaminase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPPPEQ 7
PPPP Q
Sbjct: 192 PPPPGQ 197


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PPEQDPE 10
PPEQ P+
Sbjct: 324 PPEQPPK 330


>sp|Y1320_NATPD|PUTATIVE HTH-type transcriptional regulatory protein|Natronomonas pharaonis

Query: 2 PPPPEQDPE 10
P PE DP+
Sbjct: 202 PEAPEADPD 210




8|SequenceR|45|36|PVQEQYPPPP

>sp|DPHB_STAMF|DIPHTHINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 6 YPPPP 10
YPPPP
Sbjct: 225 YPPPP 229


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 2 VQEQYPP 8
V+E YPP
Sbjct: 22 VEELYPP 28


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 2 VQEQYPP 8
V+E YPP
Sbjct: 22 VEELYPP 28


>sp|Y2613_METAC|UNCHARACTERIZED serpin-like protein MA_2613/MA_2612|Methanosarcina acetivorans

Query: 2 VQEQYP 7
VQE+YP
Sbjct: 131 VQEEYP 136


>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 1 PVQEQYPPPP 10
PV +P PP
Sbjct: 10 PVDAAFPAPP 19


>sp|PRIL_METTH|DNA primase large subunit PriL|Methanothermobacter thermautotrophicus

Query: 2 VQEQYPP 8
VQE +PP
Sbjct: 274 VQEAFPP 280


>sp|KAE1_METKA|TRNA N6-adenosine threonylcarbamoyltransferase|Methanopyrus kandleri

Query: 2 VQEQYPPPP 10
V+ QY PPP
Sbjct: 28 VKAQYIPPP 36




9|SequenceR|50|41|HYVPVPVQEQ

>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HYVPVPVQEQ 10
H++P P++ Q
Sbjct: 254 HFLPNPIEAQ 263


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 4 PVPVQEQ 10
P+P++EQ
Sbjct: 92 PIPLEEQ 98


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 4 PVPVQEQ 10
P+P++EQ
Sbjct: 92 PIPLEEQ 98


>sp|RFHPS_METJA|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YVPVPVQE 9
Y PVP+ E
Sbjct: 212 YCPVPLNE 219


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HYVPVPVQEQ 10
H +PVPV ++
Sbjct: 160 HGIPVPVDKE 169


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 HYVPVPVQEQ 10
H++P P++ Q
Sbjct: 254 HFLPDPIEAQ 263


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 HYVPVP 6
HY+P P
Sbjct: 165 HYIPYP 170


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 2 YVPVPVQEQ 10
YVP PV+ +
Sbjct: 38 YVPFPVKPE 46


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYVPVPVQE 9
+Y P+P+ E
Sbjct: 159 YYNPIPIHE 167


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HYVPVPV 7
+Y PVPV
Sbjct: 348 NYAPVPV 354


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 1 HYVPVPVQEQ 10
H+VP P+ +
Sbjct: 374 HHVPSPIHRR 383


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HYVPVPVQ 8
+++P+P+Q
Sbjct: 504 NFIPLPIQ 511


>sp|Y858_METMJ|UPF0212 protein Memar_0858|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HYVPVPVQE 9
H VP+ VQE
Sbjct: 100 HDVPLKVQE 108


>sp|CYDK_THEKO|CYTIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HYVPVPVQEQ 10
H P+P +EQ
Sbjct: 119 HISPIPPEEQ 128


>sp|HISX_METMA|HISTIDINOL dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HYVPVPV 7
+Y PVPV
Sbjct: 352 NYAPVPV 358


>sp|HISX_METAC|HISTIDINOL dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HYVPVPV 7
+Y PVPV
Sbjct: 352 NYAPVPV 358


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 2 YVPVPV 7
Y+PVPV
Sbjct: 282 YLPVPV 287


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 3 VPVPVQEQ 10
V VPVQE+
Sbjct: 16 VKVPVQEE 23




10|SequenceR|55|46|QSPTPHYVPV

>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 2 SPTPHYVPV 10
SPTP VP+
Sbjct: 562 SPTPAIVPI 570


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TPHYVPV 10
TPHYV V
Sbjct: 355 TPHYVSV 361


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 5 PHYVP 9
PHYVP
Sbjct: 81 PHYVP 85


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 5 PHYVP 9
PHYVP
Sbjct: 87 PHYVP 91


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 1 QSPTPHYVP 9
Q PTP +VP
Sbjct: 96 QDPTPDHVP 104


>sp|Y148_PYRAR|UPF0215 protein Pars_0148|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 SPTPHY 7
SPTP+Y
Sbjct: 122 SPTPYY 127


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SPTPH 6
SPTPH
Sbjct: 52 SPTPH 56


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 SPTPH 6
SPTPH
Sbjct: 52 SPTPH 56


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 5 PHYVPV 10
P+YVPV
Sbjct: 710 PYYVPV 715


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SPTPHYVPV 10
S TPH VPV
Sbjct: 225 SFTPHLVPV 233


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SPTPHYVPV 10
S TPH +PV
Sbjct: 227 SFTPHLLPV 235


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 2 SPTPHYVPV 10
S TPH +PV
Sbjct: 228 SFTPHLLPV 236


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 2 SPTPHYVPV 10
S TPH +PV
Sbjct: 228 SFTPHLLPV 236


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 2 SPTPHYV 8
SPTPH V
Sbjct: 42 SPTPHDV 48


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 2 SPTPHYVPV 10
S TPH +PV
Sbjct: 228 SFTPHLLPV 236


>sp|Y456_ARCFU|UNCHARACTERIZED protein AF_0456|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QSPTPHYVPV 10
Q+P Y+PV
Sbjct: 84 QNPLERYMPV 93


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SPTPHYVPV 10
S TPH +PV
Sbjct: 228 SFTPHLLPV 236


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SPTPHYVPV 10
S TPH VPV
Sbjct: 220 SFTPHLVPV 228


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 SPTPHYVPV 10
S TPH VPV
Sbjct: 220 SFTPHLVPV 228


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 5 PHYVP 9
PHY+P
Sbjct: 81 PHYIP 85


>sp|MOBA_PYRFU|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus furiosus (strain

Query: 1 QSPTPHYVPV 10
+S P Y+PV
Sbjct: 157 ESSNPCYIPV 166


>sp|ARGC_METB6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoregula boonei (strain DSM 21154

Query: 4 TPHYVPV 10
TPH VPV
Sbjct: 220 TPHLVPV 226


>sp|RRP42_AERPE|EXOSOME complex component Rrp42|Aeropyrum pernix (strain ATCC 700893

Query: 2 SPTPHYVPV 10
S TPH +PV
Sbjct: 2 SITPHRLPV 10


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 2 SPTPHYVP 9
S PHY P
Sbjct: 363 STRPHYYP 370


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC

Query: 2 SPTPHYVPV 10
S TPH++ V
Sbjct: 54 SKTPHFINV 62


>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 4 TPHYVP 9
+PHY+P
Sbjct: 270 SPHYLP 275


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 2 SPTPHYVP 9
S PHY P
Sbjct: 364 STRPHYYP 371


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 QSPTPHYVP 9
Q P P +VP
Sbjct: 96 QMPVPDHVP 104


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 HYVPV 10
HYVPV
Sbjct: 110 HYVPV 114


>sp|ARGC_METPE|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 TPHYVPV 10
TPH +PV
Sbjct: 220 TPHLLPV 226


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 TPHYVPV 10
TPH +PV
Sbjct: 220 TPHLLPV 226




11|SequenceR|60|51|TALRTQSPTP

>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 TALRTQSPTP 10
TAL+T +P P
Sbjct: 353 TALKTDAPLP 362


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 2 ALRTQSPTP 10
AL TQ PTP
Sbjct: 214 ALETQIPTP 222


>sp|TRPD_METB6|ANTHRANILATE phosphoribosyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 TALRTQSPTP 10
TALR + TP
Sbjct: 43 TALRAKGETP 52


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 ALRTQSPTP 10
ALRT +P P
Sbjct: 254 ALRTVNPAP 262




12|SequenceR|65|56|EETLQTALRT

>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 EETLQTALR 9
EE+LQ A+R
Sbjct: 388 EESLQKAIR 396


>sp|LEU3_METJA|3-ISOPROPYLMALATE/3-METHYLMALATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EETLQTAL 8
EET++TAL
Sbjct: 52 EETIETAL 59




13|SequenceR|70|61|IRIQEEETLQ

>sp|ARGB_METLZ|ACETYLGLUTAMATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IRIQEEETLQ 10
+R+ +EETL+
Sbjct: 82 LRVTDEETLE 91


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IRIQEEETLQ 10
IR+ ++ETL+
Sbjct: 89 IRVTDDETLE 98




14|SequenceR|75|66|GIRQAIRIQE

>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 GIRQAIRIQE 10
GIR+++R+Q+
Sbjct: 160 GIRESLRVQQ 169


>sp|RS12_PYRHO|SMALL ribosomal subunit protein uS12|Pyrococcus horikoshii (strain ATCC

Query: 1 GIRQAIRIQ 9
G+R+A+R+Q
Sbjct: 68 GMRKAVRVQ 76


>sp|RS12_PYRFU|SMALL ribosomal subunit protein uS12|Pyrococcus furiosus (strain ATCC

Query: 1 GIRQAIRIQ 9
G+R+A+R+Q
Sbjct: 68 GMRKAVRVQ 76


>sp|RS12_PYRAB|SMALL ribosomal subunit protein uS12|Pyrococcus abyssi (strain GE5 /

Query: 1 GIRQAIRIQ 9
G+R+A+R+Q
Sbjct: 68 GMRKAVRVQ 76


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 2 IRQAIRIQE 10
+RQ++RI+E
Sbjct: 144 VRQSVRIEE 152


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 2 IRQAIRIQE 10
+RQ++R+ E
Sbjct: 144 VRQSVRVDE 152


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IRQAIRIQE 10
+RQ++R+ E
Sbjct: 144 VRQSVRVDE 152


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IRQAIRIQE 10
I+Q++R++E
Sbjct: 144 IKQSVRVEE 152


>sp|DNAG_ARCFU|DNA primase DnaG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IRQAIRIQE 10
+RQAIR E
Sbjct: 155 VRQAIRADE 163




15|SequenceR|80|71|LHQILGIRQA

>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 LHQILGIR 8
LH++ GIR
Sbjct: 441 LHKLFGIR 448


>sp|Y2000_PYRAB|UNCHARACTERIZED protein Orf2|Pyrococcus abyssi (strain GE5 /

Query: 2 HQILGIRQ 9
H +LG+RQ
Sbjct: 219 HTLLGVRQ 226


>sp|RPO5_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo5|Staphylothermus marinus (strain ATCC

Query: 2 HQILGIRQA 10
H++L +R+A
Sbjct: 17 HEVLSVREA 25


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 LHQILGIR 8
+H+ILG+R
Sbjct: 119 IHKILGLR 126




16|SequenceR|85|76|YVGKPLHQIL

>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YVGKPLH 7
Y GKPLH
Sbjct: 477 YSGKPLH 483


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 2 VGKPLHQIL 10
VGKPL+ +L
Sbjct: 170 VGKPLYHLL 178


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YVGKPLHQI 9
Y G P+H+I
Sbjct: 402 YAGTPVHRI 410


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YVGKPLHQI 9
YVG+PL I
Sbjct: 81 YVGQPLKNI 89


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 YVGKPLH 7
Y GKP+H
Sbjct: 40 YAGKPVH 46


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 PLHQIL 10
PLHQ+L
Sbjct: 243 PLHQVL 248


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 3 GKPLHQI 9
GKPLH +
Sbjct: 211 GKPLHYV 217


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 GKPLHQ 8
GKPLH+
Sbjct: 3 GKPLHE 8


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YVGKPLHQIL 10
Y+G PLH ++
Sbjct: 230 YLGGPLHIVV 239


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 YVGKPLHQI 9
Y GKP+ ++
Sbjct: 415 YAGKPVQEV 423


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YVGKPLHQI 9
Y GKP+ ++
Sbjct: 415 YAGKPVQEV 423


>sp|TRKA1_METMZ|TRK system potassium uptake protein|Methanosarcina mazei

Query: 2 VGKPLHQI 9
VGKPL+++
Sbjct: 392 VGKPLNKV 399


>sp|TRKA1_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 2 VGKPLHQI 9
VGKPL+++
Sbjct: 392 VGKPLNKV 399


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 YVGKPLHQI 9
+VGKP+ +I
Sbjct: 85 HVGKPISEI 93


>sp|MFNB_METTH|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 KPLHQI 9
KPLH+I
Sbjct: 194 KPLHEI 199


>sp|Y1659_METB6|UPF0212 protein Mboo_1659|Methanoregula boonei (strain DSM 21154

Query: 2 VGKPLHQI 9
+GK LH+I
Sbjct: 95 IGKALHEI 102


>sp|GVPN_HALMT|GAS vesicle ATPase GvpN|Haloferax mediterranei (strain ATCC 33500

Query: 2 VGKPLHQI 9
VG+P+H I
Sbjct: 83 VGRPVHLI 90


>sp|GVPN1_HALSA|GAS vesicle ATPase GvpN1|Halobacterium salinarum (strain ATCC 700922

Query: 2 VGKPLHQI 9
VG+P+H I
Sbjct: 83 VGRPVHLI 90


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YVGKPLHQI 9
+VGKP+ +I
Sbjct: 85 HVGKPISEI 93


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 3 GKPLHQIL 10
GKPLH +
Sbjct: 92 GKPLHNAI 99


>sp|Y739_METJA|UNCHARACTERIZED protein MJ0739|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVGKPLH 7
++ KPLH
Sbjct: 144 FIAKPLH 150


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 YVGKPLH 7
Y G PLH
Sbjct: 164 YAGYPLH 170


>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 1 YVGKPLH 7
Y G PLH
Sbjct: 164 YAGYPLH 170


>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC

Query: 4 KPLHQI 9
KPLH+I
Sbjct: 46 KPLHEI 51


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 GKPLHQIL 10
GKP+H L
Sbjct: 94 GKPVHNAL 101


>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VGKPLHQIL 10
+G P+H++L
Sbjct: 109 LGAPIHKLL 117


>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix (strain

Query: 3 GKPLHQI 9
GKP+H I
Sbjct: 218 GKPIHPI 224


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YVGKPLHQI 9
+VGKP+ ++
Sbjct: 85 HVGKPISEV 93


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YVGKPLHQIL 10
Y GKP+ + L
Sbjct: 179 YYGKPIFETL 188


>sp|COBS_METBU|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GKPLHQIL 10
GKP+H+ L
Sbjct: 168 GKPIHEGL 175


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 3 GKPLHQ 8
GKP HQ
Sbjct: 319 GKPAHQ 324


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YVGKPLHQI 9
+VGKP+ ++
Sbjct: 81 HVGKPISEV 89


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 YVGKPLHQIL 10
Y GKP+ + L
Sbjct: 175 YYGKPIFETL 184




17|SequenceR|90|81|DRGPDYVGKP

>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DRGPDYVGKP 10
DR P YVG P
Sbjct: 287 DRTPVYVGTP 296


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 1 DRGPDYVGKP 10
D G D VG+P
Sbjct: 246 DAGTDAVGQP 255


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 1 DRGPDYVGKP 10
D G D VG+P
Sbjct: 246 DAGTDAVGQP 255


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 GPDYVG 8
GPDY+G
Sbjct: 49 GPDYLG 54


>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 5 DYVGKP 10
DYVG+P
Sbjct: 62 DYVGRP 67


>sp|RL15_METMP|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 4 PDYVGK 9
PDY GK
Sbjct: 52 PDYFGK 57


>sp|RL15_METM5|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 4 PDYVGK 9
PDY GK
Sbjct: 52 PDYFGK 57


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 PDYVGKP 10
P Y GKP
Sbjct: 21 PQYKGKP 27


>sp|RL15_METM6|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 4 PDYVGK 9
PDY GK
Sbjct: 52 PDYFGK 57


>sp|RL13_HALWD|LARGE ribosomal subunit protein uL13|Haloquadratum walsbyi (strain DSM

Query: 1 DRGPDYVGKP 10
D+GP Y +P
Sbjct: 66 DQGPAYPSRP 75


>sp|TPIS_THEKO|TRIOSEPHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GPDYVG 8
GPDYV
Sbjct: 137 GPDYVA 142


>sp|RL15_METM7|LARGE ribosomal subunit protein uL15|Methanococcus maripaludis (strain

Query: 4 PDYVGK 9
PDY GK
Sbjct: 52 PDYFGK 57


>sp|TPIS_METBF|TRIOSEPHOSPHATE isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 3 GPDYVG 8
GPDYV
Sbjct: 134 GPDYVA 139


>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PDYVGKP 10
P Y GKP
Sbjct: 21 PQYKGKP 27


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus

Query: 4 PDYVGKP 10
P Y GKP
Sbjct: 21 PQYKGKP 27


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 3 GPDYVGK 9
GP Y+GK
Sbjct: 261 GPVYIGK 267


>sp|TPIS_METBU|TRIOSEPHOSPHATE isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GPDYVG 8
GPDYV
Sbjct: 133 GPDYVA 138


>sp|RL13_NATPD|LARGE ribosomal subunit protein uL13|Natronomonas pharaonis (strain

Query: 1 DRGPDYVGKP 10
DRGP Y +P
Sbjct: 66 DRGPRYPKRP 75


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 DRGPDYVG 8
D+G D+VG
Sbjct: 558 DKGVDWVG 565


>sp|RS19_THEAC|SMALL ribosomal subunit protein uS19|Thermoplasma acidophilum (strain

Query: 4 PDYVGK 9
P+YVGK
Sbjct: 93 PNYVGK 98


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DRGPDYVGK 9
D G D++GK
Sbjct: 44 DTGVDFLGK 52


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GPDYV 7
GPDYV
Sbjct: 70 GPDYV 74


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DRGPDYVG 8
D PDY+G
Sbjct: 650 DVPPDYIG 657




18|SequenceR|95|86|KKESGDRGPD

>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 ESGDRGPD 10
ESG RGP+
Sbjct: 209 ESGVRGPE 216


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ESGDRGP 9
+S DRGP
Sbjct: 150 DSADRGP 156


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GDRGP 9
GDRGP
Sbjct: 156 GDRGP 160




19|SequenceR|100|91|VCERIKKESG

>sp|RS10_METKA|SMALL ribosomal subunit protein uS10|Methanopyrus kandleri (strain AV19

Query: 1 VCERIKK 7
VCERIKK
Sbjct: 20 VCERIKK 26


>sp|HIS2_METKA|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 VCERIKKESG 10
+CE+I +ESG
Sbjct: 43 ICEKIIEESG 52


>sp|RNH2_NATPD|RIBONUCLEASE HII|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CERIKKES 9
CERI+ E+
Sbjct: 197 CERIRAEA 204


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 1 VCERIKKE 8
V ERIKKE
Sbjct: 282 VLERIKKE 289


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VCERIKKESG 10
VCE + ESG
Sbjct: 201 VCEMLDDESG 210


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 4 RIKKESG 10
RIKK+SG
Sbjct: 43 RIKKDSG 49


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VCERIKKESG 10
+ ERIKKE+
Sbjct: 591 LIERIKKETA 600


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 VCERIKKESG 10
VC RI +E G
Sbjct: 260 VCRRILEEKG 269


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VCERIKK 7
+CE++KK
Sbjct: 137 ICEKLKK 143


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 2 CERIKKESG 10
C++I K+SG
Sbjct: 369 CKKIAKQSG 377


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ERIKKESG 10
ER+KKE G
Sbjct: 14 ERLKKEFG 21


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 VCERIK 6
+CERIK
Sbjct: 443 ICERIK 448


>sp|SUI1_HALLT|PROTEIN translation factor SUI1 homolog|Halorubrum lacusprofundi (strain

Query: 1 VCERIKKES 9
VCE + KES
Sbjct: 16 VCEDVAKES 24


>sp|SUI1_NATPD|PROTEIN translation factor SUI1 homolog|Natronomonas pharaonis (strain

Query: 1 VCERIKKES 9
VCE + KES
Sbjct: 16 VCEDVAKES 24


>sp|SUI1_HALMA|PROTEIN translation factor SUI1 homolog|Haloarcula marismortui (strain

Query: 1 VCERIKKES 9
VCE + KES
Sbjct: 16 VCEDVAKES 24


>sp|SUI1_HALSA|PROTEIN translation factor SUI1 homolog|Halobacterium salinarum (strain

Query: 1 VCERIKKES 9
VCE + KES
Sbjct: 16 VCEDVAKES 24


>sp|SUI1_HALS3|PROTEIN translation factor SUI1 homolog|Halobacterium salinarum (strain

Query: 1 VCERIKKES 9
VCE + KES
Sbjct: 16 VCEDVAKES 24


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VCERIKKE 8
V ER+KKE
Sbjct: 113 VVERLKKE 120


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CERIKKE 8
CE +KKE
Sbjct: 300 CEELKKE 306




20|SequenceR|105|96|DMMCIVCERI

>sp|COFE_METAC|COENZYME F420:L-glutamate ligase|Methanosarcina acetivorans (strain ATCC

Query: 1 DMMCIVCERI 10
D+ I+CERI
Sbjct: 19 DLPYIICERI 28


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 MMCIVCER 9
M C+VC R
Sbjct: 459 MRCLVCGR 466


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DMMCIVCE 8
D C+VC+
Sbjct: 492 DSTCVVCD 499


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 4 CIVCER 9
C++CER
Sbjct: 19 CMLCER 24


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 DMMCIVCER 9
+M C+ C R
Sbjct: 21 NMACVYCHR 29


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DMMCIVC 7
+++CIVC
Sbjct: 53 EVVCIVC 59


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DMMCIVC 7
+++CIVC
Sbjct: 53 EIVCIVC 59




21|SequenceR|110|101|DGYVFDMMCI

>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 3 YVFDMM 8
YVFDMM
Sbjct: 310 YVFDMM 315


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 1337 DGYVYDL 1343


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 392 DGYVYDL 398


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 554 DGYVYDL 560


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 1363 DGYVYDL 1369


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 1004 DGYVYDL 1010


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 1410 DGYVYDI 1416


Query: 1 DGYVFDM 7
+GYV+D+
Sbjct: 970 EGYVYDL 976


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 1266 DGYVYDI 1272


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 362 DGYVYDV 368


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 DGYVFDM 7
DGYV+D+
Sbjct: 444 DGYVYDV 450


>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 1 DGYVFD 6
DGYV+D
Sbjct: 244 DGYVYD 249


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 DGYVFD 6
DGYV+D
Sbjct: 533 DGYVYD 538


>sp|MCRG_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 DGYVFDMM 8
DG +FDM+
Sbjct: 165 DGMMFDML 172


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 1 DGYVFDMM 8
DG +FDM+
Sbjct: 165 DGMMFDML 172


>sp|MCRG_METBF|METHYL-COENZYME M reductase subunit gamma|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGYVFDMM 8
DG +FDM+
Sbjct: 166 DGVMFDML 173


>sp|RFCL_SULAC|REPLICATION factor C large subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YVFDMM 8
YVFD+M
Sbjct: 308 YVFDLM 313


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 YVFDMM 8
YVFD+M
Sbjct: 317 YVFDLM 322


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DGYVFDM 7
DGY++D+
Sbjct: 2045 DGYLYDL 2051


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGYVFDMMC 9
DG FD+ C
Sbjct: 781 DGQKFDLYC 789


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 DGYVFDM 7
+GYV+D+
Sbjct: 1007 EGYVYDL 1013


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 DGYVFDM 7
+GYV+D+
Sbjct: 1001 EGYVYDL 1007


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 DGYVFDM 7
+GYV+D+
Sbjct: 1367 EGYVYDL 1373


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGYVFDM 7
+GYV+D+
Sbjct: 927 EGYVYDL 933


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 2 GYVFDMMCI 10
GY+FD+ I
Sbjct: 181 GYIFDVFDI 189


>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 DGYVFDMMC 9
+GY+ MC
Sbjct: 22 EGYILGSMC 30




22|SequenceR|115|106|LFRIPDGYVF

>sp|CREN7_IGNH4|CHROMATIN protein Cren7|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LFRIPDGYVF 10
LFR P+G+ F
Sbjct: 32 LFRCPNGHYF 41


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LFRIPDG 7
+F+IPDG
Sbjct: 201 IFKIPDG 207


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 2 FRIPDGYVF 10
FRI GYVF
Sbjct: 479 FRILPGYVF 487


>sp|CREN7_PYRAR|CHROMATIN protein Cren7|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LFRIPDG 7
LFR+PDG
Sbjct: 41 LFRLPDG 47


>sp|Y1472_METJA|UNCHARACTERIZED protein MJ1472|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFRIPDGYVF 10
L RIPD YV+
Sbjct: 161 LSRIPDPYVY 170


>sp|XDH2_HALVD|D-XYLOSE 1-dehydrogenase (NADP(+)) 2|Haloferax volcanii (strain ATCC 29605

Query: 2 FRIPDG 7
FR+PDG
Sbjct: 151 FRLPDG 156


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LFRIPDG 7
L+R+PDG
Sbjct: 142 LYRLPDG 148


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FRIPDGYVF 10
+R+P+GY +
Sbjct: 909 YRLPEGYEY 917


>sp|AROA_METVS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 RIPDGY 8
+IPDGY
Sbjct: 101 QIPDGY 106


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 2 FRIPDGYVF 10
FR+ GYVF
Sbjct: 473 FRLIPGYVF 481


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 RIPDGYV 9
RIPD YV
Sbjct: 223 RIPDHYV 229


>sp|PYRD_HALSA|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 700922

Query: 1 LFRIPD 6
LFR+PD
Sbjct: 103 LFRLPD 108


>sp|PYRD_HALS3|DIHYDROOROTATE dehydrogenase (quinone)|Halobacterium salinarum (strain ATCC 29341

Query: 1 LFRIPD 6
LFR+PD
Sbjct: 103 LFRLPD 108


>sp|MPTA_META3|GTP cyclohydrolase MptA|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LFRIPDGY 8
+ +PDGY
Sbjct: 205 MIEVPDGY 212


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 2 FRIPDGY 8
F++P GY
Sbjct: 32 FKVPKGY 38


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 FRIPDGYVF 10
F I DG+VF
Sbjct: 379 FTIDDGHVF 387


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 FRIPDGYVF 10
F I DG+VF
Sbjct: 379 FTIDDGHVF 387


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 3 RIPDGYV 9
RI DGYV
Sbjct: 187 RIDDGYV 193


>sp|TYSY_METTM|PUTATIVE thymidylate synthase|Methanothermobacter marburgensis (strain

Query: 3 RIPDGYVF 10
R+P+GY +
Sbjct: 68 RVPEGYFW 75


>sp|CREN7_PYRIL|CHROMATIN protein Cren7|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LFRIPDG 7
LF++PDG
Sbjct: 40 LFKLPDG 46


>sp|CREN7_PYRNV|CHROMATIN protein Cren7|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LFRIPDG 7
LF++PDG
Sbjct: 41 LFKLPDG 47


>sp|RPO3_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrococcus horikoshii (strain ATCC

Query: 4 IPDGYVF 10
+PD YVF
Sbjct: 216 VPDTYVF 222


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDHYVY 162


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDHYVY 162


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDHYVY 162


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDHYVY 162


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDHYVY 162


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDHYVY 162


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 154 FNYPDRYVY 162


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 148 FNYPDKYVY 156


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 148 FNYPDKYVY 156


>sp|YR18_THEPE|UNCHARACTERIZED 18.7 kDa protein in|Thermofilum pendens

Query: 4 IPDGYV 9
+PDGY+
Sbjct: 124 VPDGYL 129


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 1 LFRIPDG 7
LFR+P G
Sbjct: 553 LFRVPQG 559


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 148 FNYPDKYVY 156


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 FRIPDGYVF 10
F PD YV+
Sbjct: 153 FNYPDKYVY 161


>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain

Query: 4 IPDGYV 9
IPDGY+
Sbjct: 3 IPDGYL 8


>sp|Y1569_METJA|PUTATIVE metal transport protein MJ1569|Methanocaldococcus jannaschii

Query: 3 RIPDGYV 9
IPDGY+
Sbjct: 2 HIPDGYL 8


>sp|NFI_THEAC|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma acidophilum (strain

Query: 3 RIPDGYV 9
+IP+GYV
Sbjct: 26 QIPEGYV 32


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LFRIPDGY 8
+FRI DGY
Sbjct: 138 IFRIFDGY 145




23|SequenceR|120|111|IHMCPLFRIP

>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 1 IHMCP 5
IHMCP
Sbjct: 247 IHMCP 251


>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 IHMCP 5
+HMCP
Sbjct: 328 VHMCP 332


>sp|BIOD_NITMS|ATP-DEPENDENT dethiobiotin synthetase BioD|Nitrosopumilus maritimus (strain SCM1)

Query: 1 IHMCPLFRIP 10
I MC ++IP
Sbjct: 158 IQMCQKYKIP 167


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 IHMCPL 6
IH CPL
Sbjct: 253 IHTCPL 258


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IHMCPLFRIP 10
I+ PLFR P
Sbjct: 20 INEAPLFRTP 29




24|SequenceR|125|116|CDLHYIHMCP

>sp|IDI2_THEON|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus onnurineus (strain NA1)

Query: 2 DLHYIHM 8
D+H++HM
Sbjct: 36 DVHFVHM 42


>sp|IDI2_THEKO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 DLHYIHM 8
D+H++HM
Sbjct: 36 DVHFVHM 42


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLHYIHM 8
D+H++HM
Sbjct: 33 DVHFVHM 39


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HYIHMCP 10
HYIH P
Sbjct: 711 HYIHFIP 717


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 CDLHYIHMC 9
CDL I MC
Sbjct: 294 CDLAIITMC 302


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 3 LHYIHMCP 10
L YIH CP
Sbjct: 231 LGYIHQCP 238


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CDLHYIHM 8
CD+ Y H+
Sbjct: 522 CDIAYFHL 529


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 YIHMCP 10
Y+H CP
Sbjct: 8 YLHSCP 13


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 CDLHYIHM 8
CD+HY +
Sbjct: 335 CDVHYCEL 342


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 CDLHYIHM 8
C+L Y+H+
Sbjct: 526 CELAYLHL 533


>sp|KORB_ARCFU|2-OXOGLUTARATE synthase subunit KorB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HYIHMC 9
H+IH C
Sbjct: 104 HFIHAC 109


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 CDLHYIHMCP 10
C L I CP
Sbjct: 108 CKLRSIRFCP 117


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 CDLHYIH 7
C LH IH
Sbjct: 28 CGLHLIH 34


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 YIHMCP 10
++H+CP
Sbjct: 257 FLHICP 262


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CDLHYIHM 8
C++ Y+H+
Sbjct: 521 CEIAYLHL 528


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CDLHYIHM 8
C++ Y+H+
Sbjct: 519 CEIAYLHL 526


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 CDLHYIHM 8
C++ Y+H+
Sbjct: 526 CEIAYLHL 533


>sp|HDRB1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina acetivorans

Query: 6 IHMCP 10
IHMCP
Sbjct: 247 IHMCP 251


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 CDLHYIHM 8
C+L ++H+
Sbjct: 142 CELEFVHV 149




25|SequenceR|130|121|LWDDICDLHY

>sp|DAPA_METPE|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 WDDICDLHY 10
WDD LHY
Sbjct: 228 WDDAISLHY 236


>sp|TRUA_METLZ|TRNA pseudouridine synthase A|Methanocorpusculum labreanum (strain ATCC

Query: 1 LWDDICDLHY 10
WD +CDL +
Sbjct: 220 FWDVVCDLSF 229


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 2 WDDICDLHY 10
W ++CD+ Y
Sbjct: 131 WKEVCDMTY 139


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWDDICDL 8
LW D+C++
Sbjct: 2 LWRDVCEI 9


>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 2 WDDICDLHY 10
WD+ C L Y
Sbjct: 267 WDEACALVY 275


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 3 DDICDLH 9
DD C++H
Sbjct: 234 DDFCEIH 240


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 3 DDICDLH 9
DD C++H
Sbjct: 234 DDFCEIH 240


>sp|Y1565_METJA|PROBABLE helicase MJ1565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DDICDL 8
DD+CDL
Sbjct: 217 DDLCDL 222


>sp|KAD_METBF|ADENYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DDICDL 8
DD+CD+
Sbjct: 146 DDVCDI 151


>sp|GATD_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus vannielii (strain ATCC

Query: 3 DDICDLH 9
D IC+LH
Sbjct: 232 DTICNLH 238


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 1 LWDDICDLHY 10
LW +CD Y
Sbjct: 353 LWGRVCDRVY 362


>sp|GATD_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina mazei (strain ATCC

Query: 3 DDICDLH 9
DD C++H
Sbjct: 235 DDYCEIH 241


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 6 CDLHY 10
CD+HY
Sbjct: 335 CDVHY 339


>sp|DTDA_SACS2|D-AMINOACYL-TRNA deacylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LWDDICD 7
+W D CD
Sbjct: 639 IWHDFCD 645


>sp|GATD_HALWD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DDICDLH 9
DD C LH
Sbjct: 252 DDTCALH 258


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 DDICDLH 9
DD+ DLH
Sbjct: 382 DDLIDLH 388


>sp|DTDA_SACI7|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|DTDA_SACI6|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|DTDA_SACI4|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|DTDA_SACI3|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|DTDA_SACI2|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|DTDA_SACI1|D-AMINOACYL-TRNA deacylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 DDICDLHY 10
+D+ D HY
Sbjct: 29 EDVTDFHY 36


>sp|RS10_NATPD|SMALL ribosomal subunit protein uS10|Natronomonas pharaonis (strain

Query: 3 DDICD 7
DDICD
Sbjct: 17 DDICD 21


>sp|Y1071_ARCFU|UNCHARACTERIZED protein AF_1071|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WDDICD 7
WD++C+
Sbjct: 78 WDELCN 83


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LWDDICD 7
LW + CD
Sbjct: 646 LWHEFCD 652




26|SequenceR|135|126|TFSRMLWDDI

>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FSRMLWDDI 10
FSR+ WD I
Sbjct: 127 FSRVTWDLI 135


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 4 RMLWDDI 10
+ LWDDI
Sbjct: 99 QQLWDDI 105


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 4 RMLWDDI 10
+ LWDDI
Sbjct: 99 QQLWDDI 105


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 FSRMLWDDI 10
R LWD+I
Sbjct: 169 LERRLWDNI 177


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 FSRMLWDD 9
F R+ WDD
Sbjct: 137 FERIAWDD 144


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain

Query: 2 FSRMLWDD 9
F R+ WD+
Sbjct: 78 FERITWDE 85


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 4 RMLWDDI 10
+ +WDDI
Sbjct: 95 QQMWDDI 101


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 4 RMLWDDI 10
+ +WDDI
Sbjct: 95 QQMWDDI 101


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 RMLWDDI 10
+ +WDDI
Sbjct: 98 QQMWDDI 104


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 4 RMLWDDI 10
+ +WDDI
Sbjct: 109 QQMWDDI 115


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 4 RMLWDDI 10
+ +WDDI
Sbjct: 109 QQMWDDI 115


>sp|RL4_METTP|LARGE ribosomal subunit protein uL4|Methanothrix thermoacetophila (strain

Query: 6 LWDDI 10
LWDD+
Sbjct: 163 LWDDV 167


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 SRMLWDDI 10
+ +LWD+I
Sbjct: 519 NELLWDEI 526


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TFSRMLWDDI 10
T LWDD+
Sbjct: 114 TIRMTLWDDL 123


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 2 FSRMLWDDI 10
F R WD++
Sbjct: 137 FKRKAWDEL 145


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 LWDDI 10
LWDDI
Sbjct: 388 LWDDI 392


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 6 LWDDI 10
LWDD+
Sbjct: 133 LWDDV 137




27|SequenceR|140|131|MCSPCTFSRM

>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 MCSPCTFSR 9
+C CTF R
Sbjct: 22 LCGYCTFRR 30


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MCSPCTFS 8
MC C+FS
Sbjct: 67 MCGICSFS 74


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 CSPCTFSR 9
C+P TF+R
Sbjct: 368 CNPKTFAR 375


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus

Query: 1 MCSPCTFSR 9
MC CT+ R
Sbjct: 58 MCCMCTYGR 66


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 2 CSPCTFSRM 10
C PC F R+
Sbjct: 27 CEPCRFKRI 35


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 CSPCTFSR 9
C+P TF+R
Sbjct: 367 CNPETFAR 374


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 2 CSPCTFSRM 10
C PC F R+
Sbjct: 27 CEPCRFKRI 35


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 2 CSPCTFSRM 10
C PC F R+
Sbjct: 27 CEPCRFKRI 35


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 2 CSPCTFSRM 10
C PC F R+
Sbjct: 27 CEPCRFKRI 35


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MCSPCTFSR 9
+CS C F +
Sbjct: 313 LCSKCNFCK 321


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MCSPCTF 7
+C+ CTF
Sbjct: 44 VCTECTF 50




28|SequenceR|145|136|ADVPEMCSPC

>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 ADVPEMCSP 9
AD PE C+P
Sbjct: 227 ADAPEDCAP 235


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 DVPEMCSPC 10
D+PE C C
Sbjct: 663 DIPEKCPHC 671


>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 2 DVPEMCSPC 10
DVPE C C
Sbjct: 48 DVPESCYLC 56


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 ADVPEMCSP 9
A+ P++C+P
Sbjct: 344 ANAPQLCTP 352


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 ADVPEMCSP 9
A+ P++C+P
Sbjct: 345 ANAPQLCTP 353


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ADVPEMCSP 9
A+ P++C+P
Sbjct: 345 ANAPQLCTP 353


>sp|CMR6_PYRFU|CRISPR system Cmr subunit Cmr6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ADVPEMCS 8
A VPE CS
Sbjct: 194 AKVPERCS 201


>sp|Y738_ARCFU|UPF0058 protein AF_0738|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PEMCSP 9
PE+C P
Sbjct: 88 PELCEP 93


>sp|PRIL_THEKO|DNA primase large subunit PriL|Thermococcus kodakarensis (strain ATCC

Query: 1 ADVPEMCSP 9
A+ P++C P
Sbjct: 361 ANAPQLCKP 369


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 VPEMCS 8
VPE+CS
Sbjct: 299 VPEVCS 304


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 3 VPEMCSPC 10
VPE+ PC
Sbjct: 227 VPELFPPC 234


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 DVPEMCSP 9
++PE C P
Sbjct: 379 EIPEECPP 386


>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 1 ADVPEMCSPC 10
+++PE C+ C
Sbjct: 98 SEIPEGCAIC 107


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 EMCSPC 10
EMCS C
Sbjct: 406 EMCSMC 411


>sp|RPO11_METVS|DNA-DIRECTED RNA polymerase subunit Rpo11|Methanococcus vannielii (strain ATCC

Query: 2 DVPEMCSPC 10
D+ ++CS C
Sbjct: 83 DIIDLCSNC 91




29|SequenceR|154|141|NTEYSSLLAADVPE

>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 NTEYSSLLAADVP 13
N EY+++L D+P
Sbjct: 101 NAEYAAILPCDMP 113


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NTEYSSLLAAD 11
NTEYS++LA +
Sbjct: 282 NTEYSNILAQN 292


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TEYSSLLAADVP 13
TEY S LA VP
Sbjct: 288 TEYESPLAGQVP 299


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 YSSLLAADVPE 14
Y LAADVP
Sbjct: 288 YDGFLAADVPH 298


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 YSSLLAADVPE 14
Y LAADVP
Sbjct: 288 YDGFLAADVPH 298


>sp|MOBA_NATPD|PROBABLE molybdenum cofactor guanylyltransferase|Natronomonas pharaonis

Query: 1 NTEYSSLLAADVP 13
T Y++++AAD+P
Sbjct: 92 ETPYAAVVAADMP 104


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 6 SLLAADVP 13
SLL ADVP
Sbjct: 35 SLLKADVP 42


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 TEYSSLLAADVPE 14
TE++ L D+PE
Sbjct: 66 TEFTQQLHPDLPE 78


>sp|MOBA_METAC|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina acetivorans

Query: 2 TEYSSLLAADVP 13
+EYS + A D+P
Sbjct: 108 SEYSFVCAGDMP 119


>sp|RL11_METMJ|LARGE ribosomal subunit protein uL11|Methanoculleus marisnigri (strain

Query: 1 NTEYSSLLAADVP 13
+TE +L+A D+P
Sbjct: 85 STEPGALVAGDLP 97




THE END