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1|SequenceR|10|1|SIFGIEQEQM

>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)

Query: 2   IFGIEQEQM 10
           IFG++ EQ+
Sbjct: 230 IFGVDDEQI 238


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    SIFGIEQEQM 10
            S FG +Q+Q+
Sbjct: 1668 SSFGFDQQQL 1677


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    SIFGIEQEQM 10
            S FG +Q+Q+
Sbjct: 1688 SSFGFDQQQL 1697


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1    SIFGIEQEQM 10
            S FG +Q+Q+
Sbjct: 1718 SSFGFDQQQL 1727


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    SIFGIEQEQM 10
            S FG +Q+Q+
Sbjct: 1668 SSFGFDQQQL 1677


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    SIFGIEQEQM 10
            S FG +Q+Q+
Sbjct: 1688 SSFGFDQQQL 1697


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    SIFGIEQEQM 10
            S FG +Q+Q+
Sbjct: 1718 SSFGFDQQQL 1727


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1  SIFGIEQEQM 10
          S+  IE+EQM
Sbjct: 21 SLADIEEEQM 30


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1    SIFGIE 6
            S+FGIE
Sbjct: 1804 SVFGIE 1809


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    SIFGIE 6
            S+FGIE
Sbjct: 1797 SVFGIE 1802


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1    SIFGIE 6
            S+FGIE
Sbjct: 1797 SVFGIE 1802


>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2   IFGIEQEQM 10
           I G+E EQ+
Sbjct: 428 IIGVEPEQL 436




2|SequenceR|15|6|GENYKSIFGI

>sp|VC21_VACCC|PROTEIN C21/B27|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  ENYKSIF 8
          E+YKS+F
Sbjct: 92 EDYKSVF 98


>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)

Query: 2   ENYKSIF 8
           ENY SIF
Sbjct: 271 ENYYSIF 277


>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)

Query: 2   ENYKSIF 8
           E+YKS+F
Sbjct: 451 EDYKSVF 457


>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIFGI 10
          EN KS+F I
Sbjct: 73 ENLKSLFNI 81


>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIFGI 10
          EN KS+F I
Sbjct: 73 ENLKSLFNI 81


>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)

Query: 1   GENYKSIFG 9
           G  +KS+FG
Sbjct: 734 GSAFKSLFG 742


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   ENYKSIF 8
           E+YKS+F
Sbjct: 448 EDYKSVF 454


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1   GENYKSIFG 9
           G  +KS+FG
Sbjct: 740 GAAFKSLFG 748


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1   GENYKSIFG 9
           G  +KS+FG
Sbjct: 740 GAAFKSLFG 748


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1   GENYKSIFG 9
           G  +KS+FG
Sbjct: 736 GAAFKSLFG 744


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 2   ENYKSIFGI 10
           +N+KSI G+
Sbjct: 544 DNFKSITGL 552


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 2   ENYKSIF 8
           EN+KS F
Sbjct: 606 ENWKSFF 612


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 2   ENYKSIF 8
           EN+KS F
Sbjct: 606 ENWKSFF 612


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 2   ENYKSIF 8
           EN+KS F
Sbjct: 603 ENWKSFF 609


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2  ENYKSIF 8
          EN KS+F
Sbjct: 73 ENLKSLF 79




3|SequenceR|20|11|TNVCLGENYK

>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TTVCLGQN 215


>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 219 TTVCLGQN 226


>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 219 TPVCLGQN 226


>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 219 TPVCLGQN 226


>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 219 TPVCLGQN 226


>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TPVCLGQN 215


>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 219 TPVCLGQN 226


>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TPVCLGQN 215


>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1

Query: 1   TNVCLGEN 8
           T VCLG+N
Sbjct: 208 TPVCLGQN 215


>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)

Query: 1   TNVCLGENYK 10
           T  CL E+YK
Sbjct: 445 TKFCLNEDYK 454


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3   VCLGENYK 10
           VCLG+N +
Sbjct: 221 VCLGQNSR 228


>sp|VC21_VACCC|PROTEIN C21/B27|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  TNVCLGENYK 10
          +  CL E+YK
Sbjct: 86 SKFCLNEDYK 95


>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 220 VCLGQN 225


>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 220 VCLGQN 225


>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 220 VCLGQN 225


>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 221 VCLGQN 226


>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 221 VCLGQN 226


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 221 VCLGQN 226


>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 210 VCLGQN 215


>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 221 VCLGQN 226


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 221 VCLGQN 226


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 210 VCLGQN 215


>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1

Query: 3   VCLGEN 8
           VCLG+N
Sbjct: 221 VCLGQN 226


>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)

Query: 2   NVCLGE 7
           N+CLG+
Sbjct: 318 NICLGD 323


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 3   VCLGENY 9
           +CL E+Y
Sbjct: 233 ICLAESY 239


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   VCLGENY 9
           +CL  NY
Sbjct: 177 ICLANNY 183


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   VCLGENY 9
           +CL  NY
Sbjct: 177 ICLANNY 183


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   VCLGENY 9
           +CL  NY
Sbjct: 177 ICLANNY 183


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   TNVCLGENYK 10
           +  CL E+YK
Sbjct: 442 SKFCLNEDYK 451


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 3    VCLGENYK 10
            +C G N+K
Sbjct: 1569 ICYGGNWK 1576


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 4   CLGEN 8
           CLG+N
Sbjct: 285 CLGQN 289


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 4   CLGENY 9
           CLGE++
Sbjct: 164 CLGEHW 169


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 4   CLGEN 8
           CLG+N
Sbjct: 285 CLGQN 289


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 2   NVCLGENYK 10
           NVC+   YK
Sbjct: 106 NVCVSWKYK 114


>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21

Query: 4   CLGENY 9
           CLGE++
Sbjct: 166 CLGEHW 171




4|SequenceR|25|16|ISVPDTNVCL

>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 2   SVPDTNVC 9
           S PDT+VC
Sbjct: 123 SKPDTSVC 130


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   PDTNVC 9
           PD NVC
Sbjct: 490 PDKNVC 495


>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30

Query: 3  VPDTNV 8
          +PDTNV
Sbjct: 92 LPDTNV 97


>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain

Query: 4   PDTNVCL 10
           PD ++CL
Sbjct: 172 PDISICL 178


>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka

Query: 4   PDTNVCL 10
           PD ++CL
Sbjct: 172 PDISICL 178


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1    ISVPDTNV 8
            +S+PDT++
Sbjct: 2157 VSLPDTDL 2164


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 1  ISVPDTN 7
          IS+PD N
Sbjct: 76 ISLPDPN 82


>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)

Query: 1   ISVPDTNVCL 10
           +S+P TN+  
Sbjct: 177 VSIPRTNIVF 186


>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   SVPDTNV 8
           +VPDT V
Sbjct: 150 AVPDTKV 156


>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56

Query: 3   VPDTNV 8
           +PDTN+
Sbjct: 119 LPDTNI 124


>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   ISVPDTNVCL 10
           +S+P TN+  
Sbjct: 183 VSIPRTNIVF 192


>sp|PG097_VARV|PROTEIN OPG097|Variola virus

Query: 1   ISVPDTNVCL 10
           +S+P TN+  
Sbjct: 182 VSIPRTNIVF 191


>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   ISVPDTNVCL 10
           +S+P TN+  
Sbjct: 182 VSIPRTNIVF 191


>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53

Query: 3  VPDTNV 8
          +PDTN+
Sbjct: 83 LPDTNI 88


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 3  VPDTNVC 9
          VP T VC
Sbjct: 59 VPSTTVC 65


>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   SVPDTNV 8
           +VPDT V
Sbjct: 150 AVPDTKV 156


>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   SVPDTNV 8
           +VPDT V
Sbjct: 150 AVPDTKV 156




5|SequenceR|30|21|LISTLISVPD

>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 2   ISTLISVPD 10
           +STL+ VPD
Sbjct: 288 LSTLLHVPD 296


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 2   ISTLISVPD 10
           ++TL+++PD
Sbjct: 295 LATLLNIPD 303


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 2   ISTLISVPD 10
           +STL++VP+
Sbjct: 305 LSTLLNVPE 313


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 2   ISTLISVPD 10
           +STL++VP+
Sbjct: 307 LSTLLNVPE 315


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2   ISTLISVPD 10
           +STL++VP+
Sbjct: 326 LSTLLNVPE 334


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 2   ISTLISVPD 10
           + TL++VPD
Sbjct: 280 LCTLLNVPD 288


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 2   ISTLISVPD 10
           +STL+ VP+
Sbjct: 287 LSTLLHVPE 295


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 2   ISTLISVPD 10
           +STL+ VP+
Sbjct: 291 LSTLLHVPE 299


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 2   ISTLISVPD 10
           +STL+ VP+
Sbjct: 301 LSTLLHVPE 309


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 3   STLISVPD 10
           STL++VP+
Sbjct: 305 STLLNVPE 312


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 2   ISTLISVPD 10
           +STL+++P+
Sbjct: 293 MSTLLNIPE 301


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 2   ISTLISVP 9
           +STL+++P
Sbjct: 280 LSTLVNIP 287


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 4    TLISVPD 10
            +LISVPD
Sbjct: 1778 SLISVPD 1784


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2    ISTLISVPD 10
            +ST  SVPD
Sbjct: 1296 LSTTPSVPD 1304


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2    ISTLISVPD 10
            +ST  SVPD
Sbjct: 1275 LSTTPSVPD 1283


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2    ISTLISVPD 10
            +ST  SVPD
Sbjct: 1277 LSTTPSVPD 1285




6|SequenceR|35|26|HLSMDLISTL

>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1  HLSMDLIS 8
          HL  DLIS
Sbjct: 83 HLHQDLIS 90


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1  HLSMDLIS 8
          HL  DLIS
Sbjct: 83 HLHQDLIS 90


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1    HLSMDLIS 8
            H S+DLI+
Sbjct: 1793 HTSVDLIT 1800


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   HLSMDLIS 8
           HL +DL++
Sbjct: 728 HLGLDLVA 735


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1  HLSMDLIS 8
          HL  D+IS
Sbjct: 83 HLHQDMIS 90




7|SequenceR|40|31|SGMQRHLSMD

>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMMRHTSQE 1384


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMMRHTSQE 1384


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMMRHTSQE 1384


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMMRHTSQE 1384


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMMRHTSQE 1384


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMMRHTSQE 1384


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1377 SGMVRHTSQE 1386


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1377 SGMVRHTSQE 1386


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1    SGMQRHLSMD 10
            SGM RH S +
Sbjct: 1375 SGMIRHTSQE 1384


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 3  MQRHLS 8
          M+RHLS
Sbjct: 30 MRRHLS 35


>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)

Query: 4  QRHLSMD 10
          QR+LS+D
Sbjct: 62 QRNLSLD 68


>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)

Query: 1  SGMQRHLSM 9
          +GMQ H+ +
Sbjct: 82 AGMQNHIRL 90


>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)

Query: 1  SGMQRHLSM 9
          +GMQ H+ +
Sbjct: 82 AGMQNHIRL 90


>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain

Query: 1  SGMQRHLSM 9
          +GMQ H+ +
Sbjct: 82 AGMQNHIRL 90


>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain

Query: 1  SGMQRHLSM 9
          +GMQ H+ +
Sbjct: 82 AGMQNHIRL 90


>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain

Query: 1  SGMQRHLSM 9
          +GMQ H+ +
Sbjct: 82 AGMQNHIRL 90




8|SequenceR|45|36|QLDRDSGMQR

>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    QLDRDSGMQR 10
            + DRD+ MQR
Sbjct: 3990 EFDRDAAMQR 3999


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    QLDRDSGMQR 10
            + DRD+ MQR
Sbjct: 3967 EFDRDAAMQR 3976


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    QLDRDSGMQR 10
            + DRD+ MQR
Sbjct: 3990 EFDRDAAMQR 3999


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    QLDRDSGMQR 10
            + DRD+ MQR
Sbjct: 3967 EFDRDAAMQR 3976


>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)

Query: 2  LDRDSGMQR 10
          L RD+G+Q+
Sbjct: 74 LSRDTGIQQ 82


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 3   DRDSGMQ 9
           DRD G Q
Sbjct: 660 DRDRGQQ 666


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 3   DRDSGMQ 9
           DRD G Q
Sbjct: 660 DRDRGQQ 666


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1    QLDRDS 6
            QLDRD+
Sbjct: 1452 QLDRDN 1457


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LDRDSGM 8
           LDRD G+
Sbjct: 150 LDRDCGV 156


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 2   LDRDSGMQ 9
            +RDSG++
Sbjct: 113 FERDSGLE 120




9|SequenceR|50|41|SSASSQLDRD

>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 5    SQLDRD 10
            SQLDRD
Sbjct: 1451 SQLDRD 1456




10|SequenceR|55|46|SPLSVSSASS

 ***** No hits found ******


11|SequenceR|60|51|PAKKVSPLSV

>sp|U13_HHV6U|UNCHARACTERIZED protein U13|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  AKKVSPLSV 10
          +KK+SPLSV
Sbjct: 54 SKKISPLSV 62


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 3  KKVSPLSV 10
          KKV P+SV
Sbjct: 74 KKVGPMSV 81


>sp|PG082_MONPV|TELOMERE-BINDING protein OPG082|Monkeypox virus (MPXV)

Query: 1  PAKKVSPL 8
          P KK+SPL
Sbjct: 15 PTKKLSPL 22


>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)

Query: 1   PAKKVSPLSV 10
           PA   SP+SV
Sbjct: 207 PASFSSPISV 216




12|SequenceR|65|56|IRRKKPAKKV

>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4

Query: 2   RRKKPAK 8
           RR+KP K
Sbjct: 233 RRRKPRK 239


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 5   KPAKKV 10
           KPAKKV
Sbjct: 366 KPAKKV 371


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 5   KPAKKV 10
           KPAKKV
Sbjct: 366 KPAKKV 371


>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)

Query: 3   RKKPAKKV 10
           +KKP+KK+
Sbjct: 150 KKKPSKKM 157


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2    RRKKP 6
            RRKKP
Sbjct: 2909 RRKKP 2913


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 2  RRKKPA 7
          +RKKPA
Sbjct: 66 KRKKPA 71


>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   RKKPAKKV 10
           +KKP+KK+
Sbjct: 155 KKKPSKKM 162


>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18

Query: 5   KPAKKV 10
           KPAK+V
Sbjct: 557 KPAKRV 562


>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4

Query: 2  RRKKPAK 8
          RR+KP K
Sbjct: 41 RRRKPRK 47


>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus

Query: 3   RKKPAKKV 10
           +KKP+KK+
Sbjct: 152 KKKPSKKM 159


>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate

Query: 3   RKKPAKKV 10
           +KKP+KK+
Sbjct: 152 KKKPSKKM 159




13|SequenceR|70|61|LSGISIRRKK

>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1   LSGISIRRKK 10
           L  ISI RKK
Sbjct: 220 LGKISIMRKK 229


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1   LSGISIRR 8
           L+G+ +RR
Sbjct: 688 LTGVDVRR 695


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 1   LSGISIRR 8
           L+G+ +RR
Sbjct: 688 LTGVDVRR 695


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 1   LSGISIRR 8
           L+G+ +RR
Sbjct: 688 LTGVDVRR 695


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 1   LSGISIRR 8
           L+G+ +RR
Sbjct: 688 LTGVDVRR 695


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   GISIRRKK 10
           G+SI RKK
Sbjct: 224 GMSILRKK 231


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   GISIRRKK 10
           G+SI RKK
Sbjct: 224 GMSILRKK 231


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   GISIRRKK 10
           G+SI RKK
Sbjct: 224 GMSILRKK 231


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   GISIRRKK 10
           G+SI RKK
Sbjct: 224 GMSILRKK 231


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1  LSGISIRRKK 10
          L G+S R+K+
Sbjct: 80 LMGVSRRKKR 89


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1   LSGISIRRKK 10
           LSG ++RR K
Sbjct: 111 LSGHALRRLK 120


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1   LSGISIRRKK 10
           LSG ++RR K
Sbjct: 111 LSGHALRRLK 120


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1   LSGISIRRKK 10
           LSG ++RR K
Sbjct: 111 LSGHALRRLK 120


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   LSGISIRRKK 10
           LSG ++RR K
Sbjct: 111 LSGHALRRLK 120




14|SequenceR|75|66|KKRRFLSGIS

>sp|U22_HHV6U|GLYCOPROTEIN U22|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   KKRRFLS 7
           ++RRFLS
Sbjct: 161 ERRRFLS 167


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1   KKRRFLSGIS 10
           + +RFL G+S
Sbjct: 790 ETQRFLDGLS 799


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1   KKRRFLSGIS 10
           + +RFL G+S
Sbjct: 789 ETQRFLDGLS 798


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1   KKRRFLSGIS 10
           + +RFL G+S
Sbjct: 789 ETQRFLDGLS 798


>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 1   KKRRFL 6
           +KRRFL
Sbjct: 133 RKRRFL 138


>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 1   KKRRFL 6
           +KRRFL
Sbjct: 133 RKRRFL 138


>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus

Query: 1   KKRRFL 6
           +KRRFL
Sbjct: 133 RKRRFL 138


>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 1   KKRRFL 6
           +KRRFL
Sbjct: 133 RKRRFL 138


>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 1   KKRRFL 6
           +KRRFL
Sbjct: 133 RKRRFL 138




15|SequenceR|80|71|KRKNDKKRRF

>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3   KNDKKRRF 10
           + DKKRR+
Sbjct: 174 EQDKKRRY 181


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3   KNDKKRRF 10
           + DKKR++
Sbjct: 162 EQDKKRKY 169


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 1    KRKND 5
            KRKND
Sbjct: 1405 KRKND 1409




16|SequenceR|85|76|NLERSKRKND

>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)

Query: 1   NLERSKRKND 10
           NLE+ K  ND
Sbjct: 661 NLEKCKTSND 670


>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   NLERSKRKND 10
           NLE+ K  ND
Sbjct: 945 NLEKCKTSND 954


>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)

Query: 1   NLERSKRKND 10
           NLE+ K  ND
Sbjct: 945 NLEKCKISND 954


>sp|PG052_VACCC|PROTEIN OPG052|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  LERSKRKND 10
          +E SKRK+D
Sbjct: 1  MEGSKRKHD 9


>sp|PG052_MONPV|PROTEIN OPG053|Monkeypox virus (MPXV)

Query: 2  LERSKRKND 10
          +E SKRK+D
Sbjct: 1  MEGSKRKHD 9


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 2   LERSKRK 8
           LER KRK
Sbjct: 161 LERDKRK 167


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   LERSKRKND 10
           LER+K K D
Sbjct: 719 LERAKMKRD 727


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 2   LERSKRKND 10
           LER+K K D
Sbjct: 719 LERAKMKRD 727


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 1   NLERSKRK 8
           +L+R KRK
Sbjct: 522 SLQRKKRK 529


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 2   LERSKRKND 10
           LER+K K D
Sbjct: 719 LERAKMKRD 727




17|SequenceR|90|81|GDVGGNLERS

>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D

Query: 3  VGGNLE 8
          VGGNLE
Sbjct: 72 VGGNLE 77


>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2

Query: 3  VGGNLE 8
          VGGNLE
Sbjct: 72 VGGNLE 77


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2    DVGGNLER 9
            +VGGN+ R
Sbjct: 2238 EVGGNITR 2245


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2    DVGGNLER 9
            +VGGN+ R
Sbjct: 2234 EVGGNITR 2241


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    GDVGGN 6
            G+VGGN
Sbjct: 6630 GNVGGN 6635


>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b

Query: 1   GDVGGNL 7
           G+VGG+L
Sbjct: 404 GEVGGSL 410


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2   DVGGNLER 9
           D+G  LER
Sbjct: 402 DIGRKLER 409


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2   DVGGNLER 9
           D+G  LER
Sbjct: 402 DIGRKLER 409


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2   DVGGNLER 9
           D+G  LER
Sbjct: 402 DIGRKLER 409


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1   GDVGGNL 7
           GD GG L
Sbjct: 970 GDCGGKL 976


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1   GDVGGNL 7
           GD GG L
Sbjct: 954 GDCGGKL 960


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1   GDVGGNL 7
           GD GG L
Sbjct: 961 GDCGGKL 967


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 1   GDVGGNL 7
           GD GG L
Sbjct: 961 GDCGGKL 967


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 1   GDVGGNL 7
           GD GG L
Sbjct: 957 GDCGGKL 963


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1   GDVGGNL 7
           GD GG L
Sbjct: 949 GDCGGKL 955


>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2   DVGGNLER 9
           D+G  LER
Sbjct: 402 DIGRKLER 409


>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5

Query: 1   GDVGGNL 7
           G+VGG+L
Sbjct: 404 GEVGGSL 410


>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2   DVGGNLER 9
           D+G  LER
Sbjct: 402 DIGRKLER 409


>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2   DVGGNLER 9
           D+G  LER
Sbjct: 402 DIGRKLER 409


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 2   DVGGNL 7
           D+GGN+
Sbjct: 326 DLGGNI 331


>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7

Query: 2   DVGGNL 7
           D+GGN+
Sbjct: 327 DLGGNI 332




18|SequenceR|95|86|EISAIGDVGG

>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   EISAIGDVGG 10
           E+SA+G+V G
Sbjct: 552 ELSALGNVLG 561


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   EISAIGDVGG 10
           E+SA+G+V G
Sbjct: 552 ELSALGNVLG 561


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   EISAIGDVGG 10
           E+SA+G+V G
Sbjct: 552 ELSALGNVLG 561


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4   AIGDVGG 10
           AIG VGG
Sbjct: 729 AIGAVGG 735


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   AIGDVGG 10
           AIG VGG
Sbjct: 729 AIGAVGG 735


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   AIGDVGG 10
           AIG VGG
Sbjct: 728 AIGAVGG 734


>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1

Query: 1  EISAIGDVG 9
          E++A+G+VG
Sbjct: 63 ELAALGEVG 71


>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   IGDVGG 10
           IGD GG
Sbjct: 520 IGDTGG 525


>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   IGDVGG 10
           IGD GG
Sbjct: 520 IGDTGG 525


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 4    AIGDVG 9
            A+GDVG
Sbjct: 1100 AMGDVG 1105


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4    AIGDVG 9
            A+GDVG
Sbjct: 1100 AMGDVG 1105


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   SAIGDV 8
           SA+GDV
Sbjct: 321 SAVGDV 326


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 3   SAIGDV 8
           SA+GDV
Sbjct: 321 SAVGDV 326


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 3   SAIGDV 8
           SA+GDV
Sbjct: 321 SAVGDV 326


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 3   SAIGDV 8
           SA+GDV
Sbjct: 321 SAVGDV 326




19|SequenceR|100|91|ESHISEISAI

>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   SHISEISA 9
           SHIS ISA
Sbjct: 159 SHISSISA 166


>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   SHISEISA 9
           SHIS ISA
Sbjct: 159 SHISSISA 166


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   SHISEISA 9
           SHIS ISA
Sbjct: 159 SHISSISA 166


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 2   SHISEISA 9
           SHIS ISA
Sbjct: 148 SHISSISA 155




20|SequenceR|105|96|KDTCMESHIS

>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 2   DTCMES 7
           DTCMES
Sbjct: 490 DTCMES 495


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 2   DTCMES 7
           DTCMES
Sbjct: 490 DTCMES 495


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 2   DTCMES 7
           DTCMES
Sbjct: 490 DTCMES 495


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2   DTCMES 7
           DTCMES
Sbjct: 490 DTCMES 495


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 1  KDTCMESHI 9
          +DTCM+++I
Sbjct: 62 QDTCMKTNI 70


>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   KDTCMES 7
           +D+C+ES
Sbjct: 517 RDSCLES 523


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    KDTCMESHIS 10
            K TC   H+S
Sbjct: 2212 KATCTTHHVS 2221


>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   KDTCMES 7
           +D+C+ES
Sbjct: 517 RDSCLES 523


>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980

Query: 2   DTCMES 7
           D CMES
Sbjct: 485 DQCMES 490


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 2   DTCMES 7
           D CMES
Sbjct: 490 DACMES 495


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 2   DTCMES 7
           D CMES
Sbjct: 490 DACMES 495


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 3  TCMES 7
          TCMES
Sbjct: 61 TCMES 65


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3  TCMES 7
          TCMES
Sbjct: 61 TCMES 65


>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2   DTCMES 7
           D CMES
Sbjct: 489 DECMES 494


>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2   DTCMES 7
           D CMES
Sbjct: 489 DECMES 494


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 2   DTCMES 7
           D CMES
Sbjct: 492 DECMES 497


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 1   KDTCMESHIS 10
           +DTC E +++
Sbjct: 95  RDTCYELYVT 104


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 2   DTCMES 7
           D CMES
Sbjct: 490 DECMES 495


>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980

Query: 2   DTCMES 7
           D CMES
Sbjct: 490 DECMES 495


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976

Query: 2   DTCMES 7
           D CMES
Sbjct: 490 DECMES 495


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981

Query: 2   DTCMES 7
           D CMES
Sbjct: 490 DECMES 495


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 3    TCMESHI 9
            +CM+ H+
Sbjct: 2111 SCMQEHV 2117


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 1   KDTCME 6
           +DTC+E
Sbjct: 95  RDTCLE 100


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 1   KDTCME 6
           +DTC+E
Sbjct: 95  RDTCLE 100


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2   DTCMESH 8
           D C+E H
Sbjct: 607 DCCIEPH 613


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 1   KDTCME 6
           +DTC+E
Sbjct: 95  RDTCLE 100


>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54

Query: 1   KDTCME 6
           +DTC+E
Sbjct: 95  QDTCLE 100




21|SequenceR|110|101|SFISNKDTCM

>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18

Query: 2   FISNKDTCM 10
           F  NKD CM
Sbjct: 125 FDGNKDNCM 133


>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45

Query: 2   FISNKDTCM 10
           F  NKD CM
Sbjct: 127 FDGNKDNCM 135


>sp|PG039_VARV|TRUNCATED interferon antagonist OPG039|Variola virus

Query: 1  SFISNKDT 8
          SF+S+KDT
Sbjct: 16 SFLSSKDT 23


>sp|PG039_VAR67|TRUNCATED interferon antagonist OPG039|Variola virus (isolate

Query: 1  SFISNKDT 8
          SF+S+KDT
Sbjct: 16 SFLSSKDT 23


>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)

Query: 3   ISNKDTCM 10
           +SN+D C+
Sbjct: 135 LSNRDLCL 142


>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   ISNKDTCM 10
           +SN+D C+
Sbjct: 135 LSNRDLCL 142


>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  SFISNKDT 8
          SF+S+KDT
Sbjct: 16 SFLSSKDT 23


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 2   FISNKDTC 9
           F SNK TC
Sbjct: 226 FKSNKSTC 233


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 2   FISNKDTC 9
           F SNK TC
Sbjct: 206 FQSNKSTC 213


>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)

Query: 3   ISNKDTC 9
           +SN++TC
Sbjct: 238 VSNQETC 244


>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   ISNKDTCM 10
           +SN++TC 
Sbjct: 238 VSNQETCF 245


>sp|SH_HMPVC|SMALL hydrophobic protein|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 5   NKDTC 9
           NKDTC
Sbjct: 107 NKDTC 111


>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66

Query: 2   FISNKDTCM 10
           F  NK+ CM
Sbjct: 121 FDGNKNNCM 129


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 5   NKDTCM 10
           +KDTC+
Sbjct: 699 SKDTCV 704




22|SequenceR|115|106|SSTNTSFISN

>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 1   SSTNTSFISN 10
           S+ NTSF+S+
Sbjct: 149 SNYNTSFVSD 158


>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SSTNTSFISN 10
              NT FI+N
Sbjct: 94  EKVNTEFIAN 103


>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)

Query: 1   SSTNTSFISN 10
              NT FI+N
Sbjct: 94  EKVNTEFIAN 103




23|SequenceR|120|111|TLGNDSSTNT

>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3

Query: 1   TLGNDSSTNT 10
           TLG+D  T+T
Sbjct: 155 TLGSDPKTST 164


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   LGNDSSTNT 10
           + NDSSTN+
Sbjct: 181 IDNDSSTNS 189


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1   TLGNDSSTNT 10
           ++GNDSS  T
Sbjct: 96  SVGNDSSEIT 105


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 3   GNDSSTN 9
           GND+ TN
Sbjct: 463 GNDTKTN 469


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 2   LGNDSSTNT 10
           LG D +TN+
Sbjct: 126 LGEDEATNS 134




24|SequenceR|125|116|QKSISTLGND

>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1   QKSISTLGN 9
           Q+S ST+GN
Sbjct: 667 QRSGSTIGN 675


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 5   STLGND 10
           STLGND
Sbjct: 562 STLGND 567


>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2   KSISTLGN 9
           +++STLGN
Sbjct: 146 EAVSTLGN 153




25|SequenceR|130|121|IFDGIQKSIS

>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 3   DGIQKSI 9
           DGI KSI
Sbjct: 276 DGILKSI 282




26|SequenceR|135|126|CLPCEIFDGI

>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3   PCEIFDG 9
           PC I DG
Sbjct: 422 PCHIIDG 428


Query: 4   CEIFDGI 10
           C++F G+
Sbjct: 890 CKVFSGV 896


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1   CLPCEIFDG 9
           C+PCE  +G
Sbjct: 226 CVPCENDNG 234


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1   CLPCEIFDG 9
           C+PCE  +G
Sbjct: 226 CVPCENDNG 234


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 4    CEIFDG 9
            CE FDG
Sbjct: 1484 CEYFDG 1489


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1   CLPCE 5
           C+PCE
Sbjct: 226 CVPCE 230


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1   CLPCE 5
           C+PCE
Sbjct: 226 CVPCE 230


>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3   PCEIFDG 9
           PC I DG
Sbjct: 422 PCHIVDG 428


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1   CLPCE 5
           C+PCE
Sbjct: 226 CVPCE 230


>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3   PCEIFDG 9
           PC I DG
Sbjct: 423 PCHIVDG 429


>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3   PCEIFDG 9
           PC I DG
Sbjct: 423 PCHIVDG 429


>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3   PCEIFDG 9
           PC I DG
Sbjct: 423 PCHIVDG 429


>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain

Query: 3   PCEIFDG 9
           PC I DG
Sbjct: 423 PCHIVDG 429


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1   CLPCE 5
           C+PCE
Sbjct: 226 CVPCE 230


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 1   CLPCEIFDG 9
           C+PCE  +G
Sbjct: 226 CVPCENDNG 234


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1   CLPCE 5
           C+PCE
Sbjct: 226 CVPCE 230


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 1   CLPCEIFDGI 10
           C P E+F+ I
Sbjct: 211 CPPLELFNSI 220


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 3   PCEIFD 8
           PC +FD
Sbjct: 563 PCNLFD 568


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 3   PCEIFD 8
           PC +FD
Sbjct: 563 PCNLFD 568


>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 4   CEIFDG 9
           CE FDG
Sbjct: 392 CEAFDG 397


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 2   LPCEIFD 8
           +PC ++D
Sbjct: 478 IPCTVYD 484


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 2   LPCEIFD 8
           +PC ++D
Sbjct: 478 IPCTVYD 484


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 2   LPCEIFD 8
           +PC ++D
Sbjct: 478 IPCTVYD 484


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 1   CLPCE 5
           C PCE
Sbjct: 433 CRPCE 437


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 3   PCEIF 7
           PC+IF
Sbjct: 207 PCDIF 211


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 3   PCEIF 7
           PC+IF
Sbjct: 207 PCDIF 211


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3   PCEIF 7
           PC+IF
Sbjct: 207 PCDIF 211


>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus

Query: 2   LPCEIFDG 9
           +P E+F G
Sbjct: 180 IPAEVFTG 187


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1   CLPCE 5
           C PCE
Sbjct: 429 CRPCE 433


>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain

Query: 4   CEIFDG 9
           CE+F G
Sbjct: 656 CELFGG 661


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 1   CLPCE 5
           C PCE
Sbjct: 450 CRPCE 454




27|SequenceR|140|131|SHRLLCLPCE

>sp|GL_HHV8P|ENVELOPE glycoprotein L|Human herpesvirus 8 type P

Query: 1  SHRLLCLPC 9
          SH  + LPC
Sbjct: 18 SHAYVALPC 26


>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain

Query: 5   LCLPC 9
           +C+PC
Sbjct: 440 MCIPC 444


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 5   LCLPC 9
           +C+PC
Sbjct: 435 MCIPC 439


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 1   SHRLLCLPCE 10
           SHR   +P E
Sbjct: 680 SHRATAIPAE 689


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2    HRLLCLPCE 10
            HRL  L CE
Sbjct: 2640 HRLEPLKCE 2648


>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong

Query: 4   LLCLPCE 10
           LLC  CE
Sbjct: 146 LLCATCE 152


>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /

Query: 3   RLLCLPC 9
           R LCL C
Sbjct: 256 RQLCLAC 262


>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C

Query: 2   HRLLCLP 8
           H+L+C+P
Sbjct: 139 HKLVCVP 145


>sp|GG_HHV11|ENVELOPE glycoprotein G|Human herpesvirus 1 (strain 17)

Query: 1   SHRLLCLPCE 10
           S R +CLP E
Sbjct: 227 SVRYVCLPSE 236


>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E

Query: 2   HRLLCLP 8
           H+L+C+P
Sbjct: 139 HKLVCVP 145


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1   SHRLLCL 7
           +H+++CL
Sbjct: 176 NHKMICL 182


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   SHRLLCL 7
           +H+++CL
Sbjct: 176 NHKMICL 182


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   SHRLLCL 7
           +H+++CL
Sbjct: 176 NHKMICL 182


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1   SHRLLCL 7
           +H+++CL
Sbjct: 176 NHKMICL 182


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1   SHRLLCL 7
           +H+++CL
Sbjct: 176 NHKMICL 182


>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)

Query: 2   HRLLCLP 8
           HR  C P
Sbjct: 103 HRFKCFP 109


>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)

Query: 3   RLLCLPC 9
           R LCL C
Sbjct: 256 RQLCLVC 262


>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)

Query: 2   HRLLCLPC 9
           HR  C+PC
Sbjct: 136 HRF-CIPC 142


>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152


>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152


>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152


>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152


>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152


>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152


>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 143 LICATCE 149


>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New

Query: 4   LLCLPCE 10
           L+C  CE
Sbjct: 146 LICATCE 152




28|SequenceR|145|136|PFRDKSHRLL

>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2    FRDKSHRLL 10
             RD SH +L
Sbjct: 1520 LRDTSHSIL 1528


>sp|A47_VARV|PROTEIN A47|Variola virus

Query: 2  FRDKSH 7
          FR+KSH
Sbjct: 35 FREKSH 40


>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  FRDKSH 7
          FR+KSH
Sbjct: 35 FREKSH 40


>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)

Query: 2   FRDKSH 7
            RDKSH
Sbjct: 399 LRDKSH 404


>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant

Query: 2   FRDKSH 7
            RDKSH
Sbjct: 399 LRDKSH 404


>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   FRDKSH 7
            RDKSH
Sbjct: 411 LRDKSH 416


>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)

Query: 2   FRDKSHRL 9
            RD +HRL
Sbjct: 191 LRDAAHRL 198


>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1   PFRDKSHRL 9
           P R  +HRL
Sbjct: 107 PLRPMTHRL 115


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1    PFRDKSHRL 9
            P+RD  H L
Sbjct: 1645 PYRDWFHAL 1653




29|SequenceR|150|141|CTMIDPFRDK

>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1  CTMIDP 6
          CTM+DP
Sbjct: 63 CTMVDP 68


>sp|PRO_ADE09|PROTEASE adenovirus D serotype 9

Query: 1  CTMIDPF 7
          C M DPF
Sbjct: 68 CYMFDPF 74


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 3    MIDPFR 8
            MIDPF+
Sbjct: 1148 MIDPFQ 1153


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 3    MIDPFR 8
            MIDPF+
Sbjct: 1144 MIDPFQ 1149


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 3    MIDPFR 8
            MIDPF+
Sbjct: 1150 MIDPFQ 1155


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 3    MIDPFR 8
            MIDPF+
Sbjct: 1150 MIDPFQ 1155


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 3    MIDPFR 8
            MIDPF+
Sbjct: 1148 MIDPFQ 1153


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 3    MIDPFR 8
            MIDPF+
Sbjct: 1151 MIDPFQ 1156


>sp|PRO_ADE17|PROTEASE adenovirus D serotype 17

Query: 1  CTMIDPF 7
          C M DPF
Sbjct: 68 CYMFDPF 74


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3   MIDPFRDK 10
           +++PFR+K
Sbjct: 764 ILEPFREK 771


>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)

Query: 3    MIDPF 7
            MIDPF
Sbjct: 1151 MIDPF 1155


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    CTMIDPFRD 9
            CT IDP  D
Sbjct: 1889 CTEIDPKLD 1897


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 2   TMIDPF 7
           T+IDPF
Sbjct: 555 TIIDPF 560


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 3    MIDPFR 8
            M+DPF+
Sbjct: 1079 MVDPFQ 1084


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3    MIDPFR 8
            M+DPF+
Sbjct: 1151 MVDPFQ 1156


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3    MIDPFR 8
            M+DPF+
Sbjct: 1151 MVDPFQ 1156


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3    MIDPFR 8
            M+DPF+
Sbjct: 1151 MVDPFQ 1156


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CTMIDPFRD 9
            CT IDP  D
Sbjct: 1889 CTEIDPKLD 1897


>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)

Query: 4  IDPFRD 9
          I+PFRD
Sbjct: 78 INPFRD 83


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3    MIDPF 7
            M+DPF
Sbjct: 1151 MVDPF 1155


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3    MIDPF 7
            M+DPF
Sbjct: 1151 MVDPF 1155


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3    MIDPF 7
            M+DPF
Sbjct: 1151 MVDPF 1155


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1  CTMIDP 6
          C M+DP
Sbjct: 63 CAMVDP 68


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1  CTMIDP 6
          C M+DP
Sbjct: 63 CAMVDP 68


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 85 TVLEPIRD 92


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 2  TMIDPFRD 9
          T+++P RD
Sbjct: 82 TVLEPIRD 89


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1  CTMIDP 6
          C M+DP
Sbjct: 63 CVMVDP 68


>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1

Query: 5   DPFRDK 10
           +PF+DK
Sbjct: 381 NPFKDK 386


>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  CTMIDP 6
          CT +DP
Sbjct: 22 CTRLDP 27


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 1  CTMIDPFRDK 10
          CT+ +  RD+
Sbjct: 50 CTLFESLRDE 59


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 1  CTMIDPFRDK 10
          CT+ +  RD+
Sbjct: 50 CTLFESLRDE 59


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967)

Query: 1  CTMIDPFRDK 10
          CT+ +  RD+
Sbjct: 50 CTLFESLRDE 59


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  CTMIDPFRDK 10
          CT+ +  RD+
Sbjct: 50 CTLFESLRDE 59


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 1  CTMIDPF 7
          CT + PF
Sbjct: 54 CTTLTPF 60


>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P

Query: 1  CTMIDPFRD 9
          CT I P  D
Sbjct: 34 CTSISPVYD 42




30|SequenceR|155|146|CSRHHCTMID

>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)

Query: 3   RHHCTMID 10
           R HCT +D
Sbjct: 449 RQHCTAVD 456


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2    SRHHCTMID 10
            + HH TM+D
Sbjct: 2265 NHHHATMLD 2273


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 2    SRHHCTMID 10
            S+H C +ID
Sbjct: 1666 SKHLCVIID 1674


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2    SRHHCTMID 10
            S+H C +ID
Sbjct: 1666 SKHLCMIID 1674


>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1  CSRHH 5
          C+RHH
Sbjct: 64 CTRHH 68


>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)

Query: 3  RHHCTMI 9
          RHHC  +
Sbjct: 25 RHHCNYL 31


>sp|PG061_VARV|PROTEIN OPG061|Variola virus

Query: 3  RHHCTMI 9
          RHHC  +
Sbjct: 25 RHHCNYL 31


>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3  RHHCTMI 9
          RHHC  +
Sbjct: 25 RHHCNYL 31


>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)

Query: 3  RHHCTMI 9
          RHHC  +
Sbjct: 25 RHHCNYL 31


>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  RHHCTMI 9
          RHHC  +
Sbjct: 25 RHHCNYL 31


>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSHHHTAL 55


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   CSRHH 5
           C RHH
Sbjct: 114 CDRHH 118


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 6  CTMID 10
          CTM+D
Sbjct: 63 CTMVD 67


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   CSRHH 5
           C RHH
Sbjct: 114 CDRHH 118


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 3   RHHCTMID 10
           RH C + D
Sbjct: 580 RHFCVLAD 587


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 3   RHHCTMID 10
           RH C + D
Sbjct: 580 RHFCVLAD 587


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 3   RHHCTMID 10
           RH C + D
Sbjct: 580 RHFCVLAD 587


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 3   RHHCTMID 10
           RH C + D
Sbjct: 580 RHFCVLAD 587


>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)

Query: 2   SRHHCTM 8
           ++H+CT+
Sbjct: 470 TQHYCTL 476


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 3   RHHCTMID 10
           RH C + D
Sbjct: 580 RHFCVLAD 587


>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 60 CSPHHTAL 67


>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 60 CSPHHTAL 67


>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 60 CSPHHTAL 67


>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)

Query: 6  CTMID 10
          CTM+D
Sbjct: 76 CTMLD 80


>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)

Query: 6  CTMID 10
          CTM+D
Sbjct: 76 CTMLD 80


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 6  CTMID 10
          CTM+D
Sbjct: 78 CTMLD 82


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 6  CTMID 10
          CTM+D
Sbjct: 78 CTMLD 82


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1   CSRHH 5
           C++HH
Sbjct: 120 CNKHH 124


>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3

Query: 1  CSRHHCTMID 10
          C+R + T+I+
Sbjct: 66 CNRQNLTLIN 75


>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAI 55


>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 48 CSPHHTAL 55


>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 77 CSPHHTAL 84


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 63 NCTLID 68


>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 63 NCTLID 68


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 80 NCTLID 85


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 63 NCTLID 68


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 5  HCTMID 10
          +CT+ID
Sbjct: 79 NCTLID 84


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 4   HHCTMID 10
           H C +ID
Sbjct: 426 HRCDLID 432


>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C

Query: 1  CSRHHCTM 8
          CS HH  +
Sbjct: 77 CSPHHTAL 84




31|SequenceR|160|151|RLCDVCSRHH

>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 2  LCDVCSRHH 10
          L D CSR H
Sbjct: 66 LTDNCSRSH 74


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1   RLCDVCSRH 9
           RLC+   RH
Sbjct: 114 RLCERARRH 122


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1   RLCDVCSRH 9
           RLC+   RH
Sbjct: 114 RLCERARRH 122


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1   RLCDVCSRH 9
           RLC+   RH
Sbjct: 114 RLCERARRH 122


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1   RLCDVCSRH 9
           RLC+   RH
Sbjct: 114 RLCERARRH 122


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 2   LCDVCSRH 9
           L D CSRH
Sbjct: 478 LHDSCSRH 485


>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G

Query: 4  DVCSRHH 10
          D CS HH
Sbjct: 58 DHCSPHH 64


>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G

Query: 4  DVCSRHH 10
          D CS HH
Sbjct: 58 DHCSPHH 64


>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G

Query: 4  DVCSRHH 10
          D CS HH
Sbjct: 58 DHCSPHH 64


>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 2   LCDVCS 7
           LC VCS
Sbjct: 169 LCTVCS 174


>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)

Query: 1   RLCDVCSR 8
           R CD CS+
Sbjct: 808 RTCDHCSK 815


>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   CDVCSRHH 10
           CD+  +HH
Sbjct: 206 CDMFEKHH 213


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 2  LCDVCSR 8
          LC +CSR
Sbjct: 7  LCVLCSR 13


>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)

Query: 1  RLCDVCS 7
          R C++CS
Sbjct: 72 RRCNICS 78


>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10

Query: 1   RLCDVCSRH 9
           RLCD  S H
Sbjct: 277 RLCDTRSAH 285


>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)

Query: 1  RLCDVCS 7
          R C++CS
Sbjct: 72 RRCNICS 78


>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P

Query: 1   RLCDVC 6
           ++CD+C
Sbjct: 454 QMCDLC 459


>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain

Query: 3   CDVCSRHH 10
           CD C R +
Sbjct: 214 CDQCERDY 221


>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain

Query: 3   CDVCSRHH 10
           CD C R +
Sbjct: 214 CDQCERDY 221


>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   DVCSRH 9
           D C RH
Sbjct: 291 DTCCRH 296


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 2    LCDVCSR 8
            LC++C +
Sbjct: 1650 LCEICEK 1656


>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)

Query: 3   CDVCSRHH 10
           CD C R +
Sbjct: 214 CDQCERDY 221


>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)

Query: 2   LCDVCSRHH 10
           +CDVC  HH
Sbjct: 548 VCDVC--HH 554


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   RLCDVCSRH 9
           ++CDV  RH
Sbjct: 447 KVCDVGRRH 455


>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 1   RLCDVCSRH 9
           ++CDV  RH
Sbjct: 447 KVCDVGRRH 455


>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain

Query: 3   CDVCSRHH 10
           CD C R +
Sbjct: 214 CDQCERDY 221


>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)

Query: 3   CDVCSRHH 10
           CD C R +
Sbjct: 214 CDQCERDY 221


>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)

Query: 4   DVCSRH 9
           D+CS+H
Sbjct: 202 DICSKH 207


>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate

Query: 4   DVCSRH 9
           D+CS+H
Sbjct: 202 DICSKH 207


>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)

Query: 4   DVCSRH 9
           D+CS+H
Sbjct: 202 DICSKH 207


>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)

Query: 3   CDVCSRHH 10
           CD C R +
Sbjct: 214 CDQCERDY 221


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 3    CDVC 6
            CDVC
Sbjct: 6164 CDVC 6167


Query: 5    VCSRH 9
            VCS+H
Sbjct: 6435 VCSKH 6439


>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4   DVCSRH 9
           D+CS+H
Sbjct: 202 DICSKH 207


>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)

Query: 4   DVCSRH 9
           D+CS+H
Sbjct: 202 DICSKH 207


>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)

Query: 4   DVCSRH 9
           D C RH
Sbjct: 291 DTCCRH 296


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 5    VCSRHH 10
            +C+ HH
Sbjct: 1985 ICNTHH 1990


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 5    VCSRHH 10
            +C+ HH
Sbjct: 1986 ICNTHH 1991


>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2   LCDVCSRHH 10
           +CDVC  HH
Sbjct: 547 VCDVC--HH 553


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 5    VCSRH 9
            VCS+H
Sbjct: 6064 VCSKH 6068


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 3    CDVC 6
            CD+C
Sbjct: 1757 CDIC 1760


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  RLCDVCSR 8
          +LC VCS+
Sbjct: 8  KLCVVCSK 15


Query: 4   DVCSRHH 10
           D C RHH
Sbjct: 112 DRCDRHH 118


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  RLCDVCSR 8
          +LC VCS+
Sbjct: 8  KLCVVCSK 15


Query: 4   DVCSRHH 10
           D C RHH
Sbjct: 112 DRCDRHH 118


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 5    VCSRH 9
            VCS+H
Sbjct: 6039 VCSKH 6043


Query: 3    CDVC 6
            CD+C
Sbjct: 1757 CDIC 1760


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 3    CDVCS 7
            C+VCS
Sbjct: 6144 CNVCS 6148


Query: 5    VCSRH 9
            VCS+H
Sbjct: 6415 VCSKH 6419


>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2   LCDVCSRHH 10
           +CD+C  HH
Sbjct: 548 VCDIC--HH 554


>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   LCDVCSRH 9
            CD C R+
Sbjct: 281 FCDTCPRY 288


>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   LCDVCSRH 9
            CD C R+
Sbjct: 281 FCDTCPRY 288


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 3    CDVCS 7
            C+VCS
Sbjct: 6194 CNVCS 6198


Query: 5    VCSRH 9
            VCS+H
Sbjct: 6465 VCSKH 6469


>sp|Z_CHAVB|RING finger protein Z|Chapare mammarenavirus (isolate

Query: 2  LCDVCSRH 9
          LCD+C   
Sbjct: 73 LCDICGEE 80


>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)

Query: 2   LCDVCSRHH 10
           +CD+C  HH
Sbjct: 550 VCDIC--HH 556




32|SequenceR|165|156|IRLYQRLCDV

>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)

Query: 2   RLYQRLC 8
           RL+QR+C
Sbjct: 153 RLFQRVC 159


>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   RLYQRLC 8
           RL+QR+C
Sbjct: 152 RLFQRVC 158


>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4

Query: 1   IRLYQRLCD 9
           I+ YQ LCD
Sbjct: 249 IQEYQMLCD 257


>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   RLYQRLC 8
           RLY +LC
Sbjct: 193 RLYHKLC 199


>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31

Query: 2   RLYQRLCDV 10
           ++YQR C++
Sbjct: 687 QMYQRCCNL 695


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   RLYQRLCDV 10
           R YQ LC++
Sbjct: 444 RAYQELCEL 452


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   RLYQRLCDV 10
           R YQ LC++
Sbjct: 444 RAYQELCEL 452


>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7

Query: 3   LYQRLCD 9
           L+QRLC+
Sbjct: 462 LFQRLCN 468


>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin)

Query: 1  IRLYQRLCDV 10
          ++L QRLC++
Sbjct: 1  MQLAQRLCEL 10


>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  IRLYQRLCDV 10
          ++L QRLC++
Sbjct: 1  MQLAQRLCEL 10


>sp|CEP2_VZVD|CYTOPLASMIC envelopment protein 2|Varicella-zoster virus (strain Dumas)

Query: 5  QRLCD 9
          QRLCD
Sbjct: 25 QRLCD 29


>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3

Query: 1   IRLYQRL 7
           IRLYQ L
Sbjct: 119 IRLYQNL 125


>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2  RLYQRLCDV 10
          ++YQR C++
Sbjct: 91 QMYQRCCNL 99


>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 4   YQRLCDV 10
           YQ +CD+
Sbjct: 685 YQMVCDI 691


>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005

Query: 4   YQRLCDV 10
           Y+R+C++
Sbjct: 219 YERMCNI 225


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2    RLYQRLC 8
            R Y RLC
Sbjct: 1539 RCYPRLC 1545


>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)

Query: 1   IRLYQRLC 8
           +R+Y+ +C
Sbjct: 626 VRVYENIC 633


>sp|SH_MUMPS|SMALL hydrophobic protein|Mumps virus (strain SBL) (MuV)

Query: 3  LYQRLC 8
          LYQR C
Sbjct: 43 LYQRSC 48


>sp|SH_MUMP1|SMALL hydrophobic protein|Mumps virus (strain SBL-1) (MuV)

Query: 3  LYQRLC 8
          LYQR C
Sbjct: 43 LYQRSC 48


>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2

Query: 2   RLYQRLC 8
           R Y+RLC
Sbjct: 168 RDYERLC 174


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2  RLYQRLCDV 10
          +LY  LCD+
Sbjct: 72 KLYFDLCDL 80


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2  RLYQRLCDV 10
          +LY  LCD+
Sbjct: 72 KLYFDLCDL 80


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2  RLYQRLCDV 10
          +LY  LCD+
Sbjct: 72 KLYFDLCDL 80


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 1   IRLYQRLC 8
           I LY+R+C
Sbjct: 204 ILLYKRVC 211


>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1

Query: 2   RLYQRLC 8
           R Y+RLC
Sbjct: 168 RDYERLC 174


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 4   YQRLCDV 10
           YQ +CD+
Sbjct: 685 YQMVCDM 691


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 4   YQRLCDV 10
           YQ +CD+
Sbjct: 685 YQMVCDM 691


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   RLYQRLCDV 10
           ++YQ+ C++
Sbjct: 687 QMYQKCCNL 695


>sp|SH_MUMPE|SMALL hydrophobic protein|Mumps virus (strain Enders) (MuV)

Query: 3  LYQRLC 8
          LYQR C
Sbjct: 43 LYQRSC 48


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 3   LYQRLC 8
           LY R+C
Sbjct: 241 LYSRMC 246


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 3   LYQRLC 8
           LY R+C
Sbjct: 241 LYSRMC 246


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 3   LYQRLC 8
           LY R+C
Sbjct: 241 LYSRMC 246


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   YQRLCD 9
           Y R+CD
Sbjct: 352 YARVCD 357


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   YQRLCD 9
           Y R+CD
Sbjct: 352 YARVCD 357


>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3  LYQRLCD 9
          LY+R+C+
Sbjct: 14 LYERVCE 20


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 4   YQRLCD 9
           Y RLC+
Sbjct: 183 YSRLCE 188


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4   YQRLCD 9
           Y RLC+
Sbjct: 183 YSRLCE 188




33|SequenceR|170|161|SESIEIRLYQ

>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 2   ESIEIRLYQ 10
           + +EI LYQ
Sbjct: 397 DPVEIALYQ 405


>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 2   ESIEIRLYQ 10
           + +EI LYQ
Sbjct: 396 DPVEIALYQ 404




34|SequenceR|175|166|SINVRSESIE

>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   SINVRSESI 9
           SIN  SESI
Sbjct: 435 SINYNSESI 443




35|SequenceR|180|171|TCEPCSINVR

>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)

Query: 2   CEPCSINV 9
           C  CS+N+
Sbjct: 170 CTVCSVNI 177


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1   TCEPCSI 7
           TC PC +
Sbjct: 662 TCGPCPL 668


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 1   TCEPCSI 7
           TC PC +
Sbjct: 662 TCGPCPL 668


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4    PCSINVR 10
            PC +N++
Sbjct: 1364 PCDVNIK 1370


>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 2   CEPCSIN 8
           CE CS+N
Sbjct: 321 CEWCSVN 327


>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 616 EPCTVGHR 623


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 631 EPCTVGHR 638


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 631 EPCTVGHR 638


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 630 EPCTVGHR 637


>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 631 EPCTVGHR 638


>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 628 EPCTVGHR 635


>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2  CEPCSIN 8
          C PC I+
Sbjct: 47 CSPCLIS 53


>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)

Query: 3   EPCSINVR 10
           EPC++  R
Sbjct: 628 EPCTVGHR 635


>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)

Query: 2   CEPCSIN 8
           CE CS N
Sbjct: 314 CEKCSKN 320


>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)

Query: 2   CEPCSIN 8
           CE CS N
Sbjct: 314 CEKCSKN 320


>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)

Query: 2   CEPCSIN 8
           CE CS N
Sbjct: 314 CEKCSKN 320


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4   PCSIN 8
           PC+IN
Sbjct: 623 PCTIN 627


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 4   PCSINV 9
           PC++N+
Sbjct: 226 PCTLNI 231


>sp|VE7_HPV65|PROTEIN E7|Human papillomavirus 65

Query: 2  CEPCSINVR 10
          C  C +NVR
Sbjct: 53 CYRCEVNVR 61




36|SequenceR|185|176|PNFRETCEPC

>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1  PNFRETCEPC 10
          PN  ET E C
Sbjct: 48 PNLLETVEGC 57


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 2  NFRETCE 8
          N+R TCE
Sbjct: 40 NYRATCE 46


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  NFRETCE 8
          N+R TCE
Sbjct: 40 NYRATCE 46


>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1

Query: 1  PNFRETCEPC 10
          PN  ET E C
Sbjct: 48 PNLLETVEGC 57


>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PNFRETC 7
           P+F +TC
Sbjct: 190 PHFNQTC 196


>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   PNFRETC 7
           P+F +TC
Sbjct: 189 PHFNQTC 195


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   PNFRETC 7
           P+F +TC
Sbjct: 189 PHFNQTC 195


>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)

Query: 2   NFRETCE 8
           NFR  C+
Sbjct: 193 NFRRACQ 199


>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   NFRETCE 8
           NFR  C+
Sbjct: 193 NFRRACQ 199


>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)

Query: 2   NFRETCE 8
           NFR  C+
Sbjct: 193 NFRRACQ 199


>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9

Query: 4   RETCEP 9
           RETC+P
Sbjct: 245 RETCDP 250


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3   FRETC 7
           +RETC
Sbjct: 242 YRETC 246


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   FRETC 7
           +RETC
Sbjct: 242 YRETC 246


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   FRETC 7
           +RETC
Sbjct: 242 YRETC 246


>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)

Query: 2   NFRETC 7
           +FRETC
Sbjct: 443 SFRETC 448


>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   NFRETC 7
           +FRETC
Sbjct: 443 SFRETC 448


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 6   TCEPC 10
           TC PC
Sbjct: 662 TCGPC 666


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 6   TCEPC 10
           TC PC
Sbjct: 662 TCGPC 666


>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)

Query: 2   NFRETCE 8
           NFR  C+
Sbjct: 193 NFRRACQ 199


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3   FRETCEPC 10
            + TCE C
Sbjct: 337 LKATCEHC 344


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1    PNFRETCEP 9
            PN +ET  P
Sbjct: 1364 PNIQETALP 1372


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3   FRETCEPC 10
            + TCE C
Sbjct: 337 LKATCEHC 344




37|SequenceR|190|181|LRIDHPNFRE

>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   IDHPNFR 9
           +DHP FR
Sbjct: 607 VDHPTFR 613


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 3   IDHPNFR 9
           +DHP FR
Sbjct: 607 VDHPTFR 613


>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 5  HPNFRE 10
          HPN+RE
Sbjct: 56 HPNYRE 61


>sp|PG070_VARV|PROTEIN OPG070|Variola virus

Query: 3   IDHPNF 8
           IDHPN 
Sbjct: 203 IDHPNL 208


>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   IDHPNF 8
           IDHPN 
Sbjct: 203 IDHPNL 208


>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   IDHPNF 8
           IDHPN 
Sbjct: 203 IDHPNL 208


>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)

Query: 3   IDHPNF 8
           IDHPN 
Sbjct: 203 IDHPNL 208


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 5   HPNFRE 10
           HPN+R+
Sbjct: 679 HPNWRD 684


>sp|PB1F2_I02A7|PROTEIN PB1-F2|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 3   IDHPN 7
           +DHPN
Sbjct: 334 VDHPN 338


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3    IDHPNFRE 10
            + HPN  E
Sbjct: 1357 VSHPNIEE 1364


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 5   HPNFRE 10
           HPNF++
Sbjct: 497 HPNFKQ 502


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 1    LRIDHPN 7
            LR+DH N
Sbjct: 1040 LRVDHHN 1046


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1    LRIDHPN 7
            LR+DH N
Sbjct: 1040 LRVDHHN 1046


>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human

Query: 5   HPNFRE 10
           HPNF++
Sbjct: 487 HPNFKQ 492


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1   LRIDHPNFR 9
           L+IDH N +
Sbjct: 783 LKIDHKNIQ 791


>sp|PB1F2_I02A6|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|PB1F2_I02A5|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|PB1F2_I01A1|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 4   DHPNFR 9
           D+PNF+
Sbjct: 266 DYPNFK 271


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 4   DHPNFR 9
           D+PNF+
Sbjct: 266 DYPNFK 271


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 5   HPNFRE 10
           HP FR+
Sbjct: 684 HPEFRD 689


>sp|SODL_VARV|CU-ZN superoxide dismutase-like protein OPG175|Variola virus

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_VAR67|CU-ZN superoxide dismutase-like protein OPG175|Variola virus (isolate

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_VACCU|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_VACCT|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Tian

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_VACCD|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_VACCC|CU-ZN superoxide dismutase-like protein OPG175|Vaccinia virus (strain

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_VACCA|CU-ZN superoxide dismutase-like protein|Vaccinia virus (strain Ankara)

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_MONPZ|CU-ZN superoxide dismutase-like protein|Monkeypox virus (strain

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_MONPV|CU-ZN superoxide dismutase-like protein OPG175|Monkeypox virus (MPXV)

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|SODL_CWPXG|CU-ZN superoxide dismutase-like protein|Cowpox virus (strain GRI-90 /

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHDNIR 12


>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   LRIDHPNFR 9
           LR+D P F+
Sbjct: 226 LRLDMPVFK 234


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 5   HPNFRE 10
           HP FR+
Sbjct: 683 HPEFRD 688


>sp|PB1F2_I05A1|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|PB1F2_I03A1|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Shantou/4231/2003

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)

Query: 1   LRIDHPNFR 9
           LR+D P F+
Sbjct: 281 LRLDMPVFK 289


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 1   LRIDHPNF 8
           LRI+ P F
Sbjct: 352 LRIESPEF 359


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   LRIDHPNFR 9
           LR+D P F+
Sbjct: 226 LRLDMPVFK 234


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 1   LRIDHPNF 8
           LRI+ P F
Sbjct: 352 LRIESPEF 359


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1    LRIDHPNFR 9
            LRI  P FR
Sbjct: 1506 LRIFKPTFR 1514


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1    LRIDHPNFR 9
            LRI  P FR
Sbjct: 1506 LRIFKPTFR 1514


>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62

Query: 5   HPNF 8
           HPNF
Sbjct: 119 HPNF 122


>sp|PB1F2_I96A0|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangdong/1/1996

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|PB1F2_I68A4|PROTEIN PB1-F2|Influenza A virus (strain A/Hong

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|SODL_CWPXB|CU-ZN superoxide dismutase-like protein OPG175|Cowpox virus (strain

Query: 3  IDHPNFR 9
          IDH N R
Sbjct: 6  IDHGNIR 12


>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)

Query: 1  LRIDHPN 7
          +++DHP+
Sbjct: 49 IKVDHPD 55


>sp|PB1F2_I01A2|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  LRIDHPN 7
          +++DHP+
Sbjct: 54 IKVDHPD 60


>sp|PB1F2_I01A0|PROTEIN PB1-F2|Influenza A virus (strain A/Silky

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|PB1F2_I00A0|PROTEIN PB1-F2|Influenza A virus (strain A/Duck/Hong

Query: 2  RIDHPN 7
          R++HPN
Sbjct: 29 RLEHPN 34


>sp|PB1F2_I80A2|PROTEIN PB1-F2|Influenza A virus (strain A/Seal/Massachusetts/1/1980

Query: 2  RIDHPNFRE 10
          +++HPN  +
Sbjct: 29 KLEHPNLTQ 37


>sp|A47_VARV|PROTEIN A47|Variola virus

Query: 1  LRIDHPN 7
          +++DHP+
Sbjct: 54 VKVDHPD 60


>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1  LRIDHPN 7
          +++DHP+
Sbjct: 54 VKVDHPD 60


>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27

Query: 5   HPNFRE 10
           HP+F E
Sbjct: 266 HPDFHE 271


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 2   RIDHP 6
           R+DHP
Sbjct: 236 RLDHP 240


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 4    DHPNFRE 10
            D+P+F E
Sbjct: 2083 DYPSFNE 2089


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   LRIDHPNFRE 10
           LR+ HP   E
Sbjct: 295 LRLTHPELCE 304


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LRIDHPNFRE 10
           LR+ HP   E
Sbjct: 295 LRLTHPELCE 304


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LRIDHPNFRE 10
           LR+ HP   E
Sbjct: 295 LRLTHPELCE 304




38|SequenceR|195|186|DDSLILRIDH

>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1   DDSLILR 7
           DDS+ILR
Sbjct: 345 DDSIILR 351


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1   DDSLILR 7
           DDS+ILR
Sbjct: 345 DDSIILR 351


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 1   DDSLILR 7
           DD LILR
Sbjct: 294 DDDLILR 300


>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41

Query: 1   DDSLILRIDH 10
           DD+ I  IDH
Sbjct: 157 DDTGIYYIDH 166


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 5   ILRIDH 10
           ILR+DH
Sbjct: 120 ILRLDH 125


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 5   ILRIDH 10
           ILR+DH
Sbjct: 120 ILRLDH 125


>sp|PG069_MONPV|PROTEIN OPG069|Monkeypox virus (MPXV)

Query: 3  SLILRIDH 10
          SLI++ DH
Sbjct: 59 SLIIKSDH 66




39|SequenceR|200|191|KEMLVDDSLI

>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    KEMLVDDSLI 10
            KE+ V DSL+
Sbjct: 7120 KEIFVGDSLV 7129


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    KEMLVDDSLI 10
            KE+ V DSL+
Sbjct: 7083 KEVFVGDSLV 7092


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    KEMLVDDSLI 10
            KE+ V DSL+
Sbjct: 7140 KEIFVGDSLV 7149


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    KEMLVDDSLI 10
            KE+ V DSL+
Sbjct: 7170 KEIFVGDSLV 7179


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1    KEMLVDDSLI 10
            K +++D SLI
Sbjct: 1033 KRIMIDQSLI 1042


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1    KEMLVDD 7
            K+M VDD
Sbjct: 1415 KQMAVDD 1421


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 2   EMLVDDSLI 10
           EM+ DDS++
Sbjct: 363 EMIQDDSVV 371


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3    MLVDDSLI 10
            +LVD SL+
Sbjct: 2543 LLVDSSLV 2550


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    MLVDDSLI 10
            +LVD SL+
Sbjct: 2543 LLVDSSLV 2550


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    EMLVDDSL 9
            E +VDDS+
Sbjct: 1011 ECIVDDSV 1018


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    EMLVDDSL 9
            E +VDDS+
Sbjct: 1011 ECIVDDSV 1018




40|SequenceR|205|196|MFEEYKEMLV

>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   FEEYKEML 9
           FE YKE++
Sbjct: 277 FERYKELI 284


>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   FEEYKEML 9
           FE YKE++
Sbjct: 277 FERYKELI 284


>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1  MFEEYKEML 9
          +FEEYK+++
Sbjct: 58 LFEEYKDVI 66


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1  MFEEYKEML 9
          +FEEYK+++
Sbjct: 58 LFEEYKDVI 66


>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United

Query: 1  MFEEYKEML 9
          +FEEYK+++
Sbjct: 58 LFEEYKDVI 66


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1  MFEEYKEML 9
          +FEEYK+++
Sbjct: 58 LFEEYKDVI 66


>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1  MFEEYKEML 9
          +FEEYK+++
Sbjct: 58 LFEEYKDVI 66


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 691 EEYRELL 697


>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1  MFEEYKEML 9
          +FEEYK+++
Sbjct: 58 LFEEYKDVI 66


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 692 EEYRELL 698


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 691 EEYRELL 697


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 692 EEYRELL 698


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 691 EEYRELL 697


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 691 EEYRELL 697


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 691 EEYRELL 697


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 3   EEYKEML 9
           EEY+E+L
Sbjct: 691 EEYRELL 697


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    FEEYK 6
            FEEYK
Sbjct: 2512 FEEYK 2516


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    FEEYK 6
            FEEYK
Sbjct: 2512 FEEYK 2516


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    FEEYK 6
            FEEYK
Sbjct: 2512 FEEYK 2516


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    FEEYK 6
            FEEYK
Sbjct: 2512 FEEYK 2516


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    FEEYK 6
            FEEYK
Sbjct: 2512 FEEYK 2516


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 2   FEEYK 6
           FEEYK
Sbjct: 389 FEEYK 393


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1  MFEEYKEM 8
          +FEEYK++
Sbjct: 58 LFEEYKDV 65


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 1   MFEEYKEML 9
           M  +YK+ML
Sbjct: 848 MIRKYKDML 856


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 2   FEEYKEM 8
           +EEYK++
Sbjct: 991 YEEYKKI 997


>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United

Query: 2   FEEYKEM 8
           +EEYK++
Sbjct: 992 YEEYKKI 998




41|SequenceR|210|201|LWRRLMFEEY

>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2   WRRLMFEEY 10
           W+R ++E+Y
Sbjct: 879 WQRCVWEDY 887


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2   WRRLMFEEY 10
           W+R ++E+Y
Sbjct: 876 WQRCVWEDY 884


>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P

Query: 1   LWRRLMFEEY 10
           LW   MF+ Y
Sbjct: 468 LWESEMFQTY 477


>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 5   LMFEEY 10
           L+FEEY
Sbjct: 307 LLFEEY 312


>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3

Query: 5   LMFEEY 10
           L+FEEY
Sbjct: 307 LLFEEY 312


>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 5   LMFEEY 10
           L+FEEY
Sbjct: 307 LLFEEY 312


>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 5   LMFEEY 10
           L+FEEY
Sbjct: 307 LLFEEY 312


>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1

Query: 5   LMFEEY 10
           L+FEEY
Sbjct: 307 LLFEEY 312


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1  LWRRLMFEEY 10
          +W R++ E+Y
Sbjct: 8  IWERVVDEQY 17


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   LWRRLMFE 8
           + +RLMFE
Sbjct: 423 MMKRLMFE 430


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   LWRRLMFE 8
           + +RLMFE
Sbjct: 423 MMKRLMFE 430


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 1   LWRRLMFE 8
           + +RLMFE
Sbjct: 423 MMKRLMFE 430


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1   LWRRLMFEE 9
           LW  L F+E
Sbjct: 610 LWSSLEFQE 618


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2   WRRLMFEEY 10
           W++ ++E+Y
Sbjct: 887 WQKCVWEDY 895


>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)

Query: 5   LMFEEY 10
           +MFE+Y
Sbjct: 259 IMFEQY 264


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 1   LWRRLMFEEY 10
           +W  L  EE+
Sbjct: 927 VWNSLQIEEF 936


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2   WRRLMFEEY 10
           W+  ++E+Y
Sbjct: 877 WQNYIWEDY 885


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2   WRRLMFEEY 10
           W+  ++E+Y
Sbjct: 897 WQNCIWEDY 905




42|SequenceR|215|206|DPDAVLWRRL

>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 3   DAVLWRR 9
           DA+LW+R
Sbjct: 136 DAILWQR 142


>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1   DPDAVLWR 8
           DP+ +LWR
Sbjct: 290 DPNRLLWR 297


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   PDAVLW 7
           PDA LW
Sbjct: 415 PDACLW 420


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1    DPDAVLWRRL 10
            +PD  +W R+
Sbjct: 1850 NPDFEIWERV 1859


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    DPDAVLW 7
            DP+  LW
Sbjct: 3386 DPEGALW 3392


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    DPDAVLW 7
            DP+  LW
Sbjct: 3386 DPEGALW 3392


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    DPDAVLW 7
            DP+  LW
Sbjct: 3385 DPEGALW 3391


>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  PDAVLWRRL 10
          PD + W+++
Sbjct: 5  PDDLFWQQI 13


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 3    DAVLW 7
            DA+LW
Sbjct: 1571 DAILW 1575


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 3    DAVLW 7
            DA+LW
Sbjct: 1571 DAILW 1575


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  DAVLWRR 9
          DAV W R
Sbjct: 54 DAVCWLR 60


>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)

Query: 1  DPDAVLW 7
           PDA LW
Sbjct: 7  QPDAGLW 13


>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)

Query: 3   DAVLWRRL 10
           D V W+RL
Sbjct: 350 DHVEWKRL 357


>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)

Query: 3  DAVLWRRL 10
          D+VLW  L
Sbjct: 71 DSVLWAAL 78


>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  DAVLWRR 9
          DAV W R
Sbjct: 54 DAVCWLR 60


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 3    DAVLW 7
            DAV+W
Sbjct: 1577 DAVMW 1581


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 3    DAVLW 7
            DAV+W
Sbjct: 1577 DAVMW 1581


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 3    DAVLW 7
            DAV+W
Sbjct: 1577 DAVMW 1581


>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   DAVLWRRL 10
           D V W+RL
Sbjct: 350 DHVEWKRL 357




43|SequenceR|220|211|PCWRCDPDAV

>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   PCWRC 5
           PCWRC
Sbjct: 172 PCWRC 176


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 1  PCWRCDPD 8
          PCW+C  D
Sbjct: 77 PCWKCSQD 84


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 2  CWRC 5
          CWRC
Sbjct: 12 CWRC 15


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CWRC 5
           CWRC
Sbjct: 415 CWRC 418


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CWRC 5
           CWRC
Sbjct: 414 CWRC 417


>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CWRC 5
           CWRC
Sbjct: 414 CWRC 417


>sp|VU84_HHV6Z|PROTEIN U84|Human herpesvirus 6B (strain Z29)

Query: 2   CWRCDPDAV 10
           C R DP+AV
Sbjct: 145 CQRQDPNAV 153


>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CWRC 5
           CWRC
Sbjct: 415 CWRC 418


>sp|NSP4_ROTJ1|NON-STRUCTURAL glycoprotein 4|Rotavirus X (strain

Query: 3   WRCD 6
           WRCD
Sbjct: 172 WRCD 175


>sp|NSP4_ROTB2|NON-STRUCTURAL glycoprotein 4|Rotavirus X (isolate

Query: 3   WRCD 6
           WRCD
Sbjct: 172 WRCD 175


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3    WRCDP 7
            WRC+P
Sbjct: 1191 WRCNP 1195


>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate

Query: 3   WRCD 6
           WRCD
Sbjct: 168 WRCD 171


>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United

Query: 3   WRCD 6
           WRCD
Sbjct: 168 WRCD 171


>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)

Query: 5  CDPD 8
          CDPD
Sbjct: 22 CDPD 25


>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)

Query: 5  CDPD 8
          CDPD
Sbjct: 22 CDPD 25


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 2   CWRCDP 7
           CW  DP
Sbjct: 818 CWLVDP 823


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 3   WRCD 6
           WRCD
Sbjct: 422 WRCD 425


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   PCWRC 5
           PC+RC
Sbjct: 350 PCFRC 354


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 5    CDPD 8
            CDPD
Sbjct: 1945 CDPD 1948


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 5    CDPD 8
            CDPD
Sbjct: 1965 CDPD 1968


>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)

Query: 1   PCWRCDP 7
           PC  C P
Sbjct: 134 PCGLCSP 140


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 5    CDPD 8
            CDPD
Sbjct: 1960 CDPD 1963


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 5    CDPD 8
            CDPD
Sbjct: 1957 CDPD 1960


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 5    CDPD 8
            CDPD
Sbjct: 1957 CDPD 1960


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 5    CDPD 8
            CDPD
Sbjct: 1958 CDPD 1961


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 5    CDPD 8
            CDPD
Sbjct: 1958 CDPD 1961


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 5    CDPD 8
            CDPD
Sbjct: 1960 CDPD 1963


>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4  RCDP 7
          RCDP
Sbjct: 28 RCDP 31


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 5    CDPD 8
            CDPD
Sbjct: 1931 CDPD 1934


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 5    CDPD 8
            CDPD
Sbjct: 1876 CDPD 1879


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 5    CDPD 8
            CDPD
Sbjct: 1941 CDPD 1944


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1   PCWRC 5
           PC+RC
Sbjct: 350 PCFRC 354


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 5    CDPD 8
            CDPD
Sbjct: 1944 CDPD 1947


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 5    CDPD 8
            CDPD
Sbjct: 1933 CDPD 1936


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 5    CDPD 8
            CDPD
Sbjct: 1957 CDPD 1960


>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3   WRCDP 7
           WR DP
Sbjct: 213 WRFDP 217


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 5    CDPD 8
            CDPD
Sbjct: 1930 CDPD 1933


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 5    CDPD 8
            CDPD
Sbjct: 2044 CDPD 2047


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 5    CDPD 8
            CDPD
Sbjct: 1945 CDPD 1948


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 5    CDPD 8
            CDPD
Sbjct: 1934 CDPD 1937


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 5    CDPD 8
            CDPD
Sbjct: 1933 CDPD 1936


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 5    CDPD 8
            CDPD
Sbjct: 2045 CDPD 2048


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 5    CDPD 8
            CDPD
Sbjct: 2042 CDPD 2045


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 5    CDPD 8
            CDPD
Sbjct: 1934 CDPD 1937


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 5    CDPD 8
            CDPD
Sbjct: 2044 CDPD 2047


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 5    CDPD 8
            CDPD
Sbjct: 1935 CDPD 1938


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 5    CDPD 8
            CDPD
Sbjct: 2044 CDPD 2047


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 5    CDPD 8
            CDPD
Sbjct: 1943 CDPD 1946


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 5    CDPD 8
            CDPD
Sbjct: 1937 CDPD 1940


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 5    CDPD 8
            CDPD
Sbjct: 1951 CDPD 1954


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 5    CDPD 8
            CDPD
Sbjct: 1935 CDPD 1938


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 5    CDPD 8
            CDPD
Sbjct: 1953 CDPD 1956


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 5    CDPD 8
            CDPD
Sbjct: 1935 CDPD 1938


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 5    CDPD 8
            CDPD
Sbjct: 1932 CDPD 1935


>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV

Query: 2   CWRCDP 7
           C+R DP
Sbjct: 125 CYRVDP 130


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 5    CDPD 8
            CDPD
Sbjct: 1943 CDPD 1946


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 5    CDPD 8
            CDPD
Sbjct: 1946 CDPD 1949


>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3    WRCDPDAV 10
            W C  DA+
Sbjct: 2013 WDCKGDAI 2020


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 3    WRCDPDAV 10
            W C  DA+
Sbjct: 2013 WDCKGDAI 2020


>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)

Query: 2   CWRCDP 7
           CW  DP
Sbjct: 200 CWVPDP 205


>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain

Query: 2   CWRCDPDA 9
           C++C P A
Sbjct: 230 CYKCTPVA 237


>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34

Query: 4   RCDPD 8
           +CDPD
Sbjct: 236 QCDPD 240


>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate

Query: 2   CWRCDPDA 9
           C++C P A
Sbjct: 230 CYKCTPVA 237


>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human

Query: 4  RCDP 7
          RCDP
Sbjct: 38 RCDP 41


>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32

Query: 5   CDPDA 9
           CDPD 
Sbjct: 239 CDPDG 243


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 4  RCDP 7
          RCDP
Sbjct: 38 RCDP 41


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 1   PCWRC 5
           PC+RC
Sbjct: 350 PCFRC 354


>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3   WRCDP 7
           WR DP
Sbjct: 212 WRFDP 216


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 1   PCWRC 5
           PC+RC
Sbjct: 350 PCFRC 354


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 589 CFRKHPDAT 597


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 589 CFRKHPDAT 597


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 586 CFRKHPDAT 594


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 590 CFRKHPDAT 598


>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 2   CWRCDP 7
           CW  DP
Sbjct: 208 CWVPDP 213


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 589 CFRKHPDAT 597


>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3   WRCDP 7
           WR DP
Sbjct: 195 WRFDP 199


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2   CWRCDPDA 9
           C+R  PDA
Sbjct: 586 CFRKHPDA 593


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 585 CFRKHPDAT 593


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 586 CFRKHPDAT 594


>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996

Query: 1   PCWRCDPD 8
           P   CDPD
Sbjct: 120 PYVSCDPD 127


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 1   PCWRC 5
           PC+RC
Sbjct: 350 PCFRC 354


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 585 CFRKHPDAT 593


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 1   PCWRC 5
           PC+RC
Sbjct: 350 PCFRC 354


>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)

Query: 2   CWRCDP 7
           CW  DP
Sbjct: 208 CWIPDP 213


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2   CWRCDPDAV 10
           C+R  PDA 
Sbjct: 585 CFRRHPDAT 593




44|SequenceR|225|216|GCDPAPCWRC

>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 6   PCWRC 10
           PCWRC
Sbjct: 172 PCWRC 176


>sp|VB20_VACCC|PROTEIN B20|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  DPAPCWRC 10
          DP  C+RC
Sbjct: 32 DPNACYRC 39


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 6  PCWRC 10
          PCW+C
Sbjct: 77 PCWKC 81


>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60

Query: 2   CDPAP 6
           CDPAP
Sbjct: 178 CDPAP 182


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 3   DPAPCWRC 10
           DP   WRC
Sbjct: 154 DPHDFWRC 161


>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   DPAPC 7
           +PAPC
Sbjct: 456 EPAPC 460


>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   DPAPC 7
           +PAPC
Sbjct: 456 EPAPC 460


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 1   GCDPAPC 7
           GC+PA C
Sbjct: 764 GCNPADC 770


>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 1   GCDPAPCWR 9
           G    PCW+
Sbjct: 307 GVIDTPCWK 315


>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 1   GCDPAPCWR 9
           G    PCW+
Sbjct: 307 GVIDTPCWK 315


>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 1   GCDPAPCWR 9
           G    PCW+
Sbjct: 307 GVIDTPCWK 315


>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 1   GCDPAPCWR 9
           G    PCW+
Sbjct: 307 GVIDTPCWK 315


>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus

Query: 1   GCDPAPCWR 9
           G    PCW+
Sbjct: 307 GVIDTPCWK 315


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    CDPAPCW 8
            C+P  CW
Sbjct: 1193 CNPTWCW 1199


>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55

Query: 3   DPAPCWR 9
           DP PC R
Sbjct: 240 DPPPCKR 246


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2429 GCNKAGCLFC 2438


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2449 GCNKAGCLFC 2458


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2479 GCNKAGCLFC 2488


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 4   PAPCWR 9
           P P WR
Sbjct: 662 PVPAWR 667


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2130 GCNNADCVAC 2139


>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 2  CDPAPC 7
          C P PC
Sbjct: 12 CLPVPC 17


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2479 GCNKAGCLFC 2488


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2429 GCNKAGCLFC 2438


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2449 GCNKAGCLFC 2458


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    GCDPAPCWRC 10
            GC+ A C  C
Sbjct: 2130 GCNNADCVAC 2139


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 6   PCWRC 10
           PC+RC
Sbjct: 350 PCFRC 354


>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1

Query: 2  CDPAPC 7
          C P PC
Sbjct: 12 CLPVPC 17


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 2   CDPAPCWRC 10
           CD  PC  C
Sbjct: 273 CDAPPCAPC 281


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 1   GCDPAPCWR 9
           GC    CW+
Sbjct: 267 GCTFVACWK 275


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 6   PCWRC 10
           PC+RC
Sbjct: 350 PCFRC 354


>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 101 CDPGKCYQ 108


>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPVKCYQ 131


>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain

Query: 1  GCDPAPCWR 9
          G  P PC R
Sbjct: 33 GRGPPPCLR 41


>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGKCYQ 131


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1  GCDPAPCWR 9
          G  P PC R
Sbjct: 33 GRGPPPCLR 41


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1  GCDPAPCWR 9
          G  P PC R
Sbjct: 33 GRGPPPCLR 41


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 3   DPAPCWRC 10
           DP P ++C
Sbjct: 618 DPMPPFKC 625


>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPGRCYQ 131


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1    GCDPAPCWRC 10
            G +P+  W C
Sbjct: 1895 GREPSTSWIC 1904


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2   CDPAP 6
           CDP P
Sbjct: 341 CDPLP 345


>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33

Query: 2   CDPAPCWR 9
           C+P  C++
Sbjct: 104 CEPPKCFK 111


>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPRKCYQ 131


>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   GCDPAPCWR 9
           G  P PC++
Sbjct: 351 GTIPTPCFK 359


>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   GCDPAPCWR 9
           G  P PC++
Sbjct: 351 GTIPTPCFK 359


>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996

Query: 2   CDPAPCWR 9
           CDP  C++
Sbjct: 124 CDPDKCYQ 131


>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 6   PCWRC 10
           PC+RC
Sbjct: 350 PCFRC 354


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 2   CDPAPCW 8
            DP P W
Sbjct: 867 TDPGPSW 873


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 2   CDPAPCW 8
            DP P W
Sbjct: 867 TDPGPSW 873


>sp|X_HBVF6|PROTEIN X|Hepatitis B virus genotype F2

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVB6|PROTEIN X|Hepatitis B virus genotype B2

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|X_HBVH2|PROTEIN X|Hepatitis B virus genotype H

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 6   PCWRC 10
           PC+RC
Sbjct: 350 PCFRC 354


>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CSPAPC 148


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 6   PCWRC 10
           PC+RC
Sbjct: 350 PCFRC 354


>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)

Query: 3  DPAPCW 8
          DP P W
Sbjct: 32 DPLPPW 37


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 1   GCDPAPCWR 9
           GC    CW+
Sbjct: 263 GCTFVGCWK 271


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    GCDPAPCWR 9
            GC P   WR
Sbjct: 2923 GCPPLRAWR 2931


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    GCDPAPCWR 9
            GC P   WR
Sbjct: 2923 GCPPLRAWR 2931


>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain

Query: 3  DPAPCW 8
          DP P W
Sbjct: 32 DPLPPW 37


>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CAPAPC 148


>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CAPAPC 148


>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CAPAPC 148


>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CAPAPC 148


>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CAPAPC 148


>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D

Query: 2   CDPAPC 7
           C PAPC
Sbjct: 143 CAPAPC 148




45|SequenceR|230|221|AIVAYGCDPA

>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 3   VAYGCDPA 10
           +AYGCD A
Sbjct: 558 MAYGCDHA 565


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   VAYGCDPA 10
           +AYGCD A
Sbjct: 558 MAYGCDHA 565


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1927 AVGCDP 1932


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1906 AVGCDP 1911


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1928 AVGCDP 1933


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1906 AVGCDP 1911


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1902 AVGCDP 1907


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 2042 AIGCDP 2047


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 2041 AIGCDP 2046


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 2039 AIGCDP 2044


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 1   AIVAYGCDP 9
           AIVAYG  P
Sbjct: 100 AIVAYGVWP 108


Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1899 AVGCDP 1904


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1938 AVGCDP 1943


Query: 4   AYGCD 8
           A+GCD
Sbjct: 904 AHGCD 908


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1942 AVGCDP 1947


Query: 4   AYGCD 8
           A+GCD
Sbjct: 908 AHGCD 912


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 2041 AIGCDP 2046


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 2041 AIGCDP 2046


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1962 AVGCDP 1967


Query: 1   AIVAYGCDPA 10
           A+VAYG  P+
Sbjct: 100 AVVAYGEWPS 109


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1957 AVGCDP 1962


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1873 AIGCDP 1878


Query: 5   YGCDPA 10
           YGC P+
Sbjct: 803 YGCSPS 808


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1957 AVGCDP 1962


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1950 AVGCDP 1955


Query: 4   AYGCD 8
           A+GCD
Sbjct: 916 AHGCD 920


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1931 AVGCDP 1936


Query: 4   AYGCD 8
           A+GCD
Sbjct: 897 AHGCD 901


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1929 AVGCDP 1934


Query: 4   AYGCD 8
           A+GCD
Sbjct: 895 AHGCD 899


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1948 AVGCDP 1953


Query: 4   AYGCD 8
           A+GCD
Sbjct: 914 AHGCD 918


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1942 AVGCDP 1947


Query: 1   AIVAYGCDPA 10
           A V YG +PA
Sbjct: 773 ATVLYGINPA 782


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1930 AVGCDP 1935


Query: 4   AYGCD 8
           A+GCD
Sbjct: 896 AHGCD 900


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   VAYGCDPA 10
           V YG DPA
Sbjct: 262 VVYGYDPA 269


Query: 2  IVAYGC 7
          ++AYGC
Sbjct: 8  LMAYGC 13


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1913 AVGCDP 1918


Query: 1   AIVAYGCDPA 10
           A+VAYG  P+
Sbjct: 100 AVVAYGVWPS 109


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1934 AVGCDP 1939


Query: 4   AYGCD 8
           A+GCD
Sbjct: 900 AHGCD 904


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1954 AVGCDP 1959


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1954 AVGCDP 1959


Query: 1   AIVAYG 6
           AIVAYG
Sbjct: 100 AIVAYG 105


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1954 AVGCDP 1959


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1941 AVGCDP 1946


Query: 4   AYGCD 8
           A+GCD
Sbjct: 907 AHGCD 911


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1943 AVGCDP 1948


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1930 AVGCDP 1935


Query: 4   AYGCD 8
           A+GCD
Sbjct: 896 AHGCD 900


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1955 AVGCDP 1960


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1940 AVGCDP 1945


Query: 4   AYGCD 8
           A+GCD
Sbjct: 906 AHGCD 910


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1955 AVGCDP 1960


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1931 AVGCDP 1936


Query: 4   AYGCD 8
           A+GCD
Sbjct: 897 AHGCD 901


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1932 AVGCDP 1937


Query: 4   AYGCD 8
           A+GCD
Sbjct: 898 AHGCD 902


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1932 AVGCDP 1937


Query: 4   AYGCD 8
           A+GCD
Sbjct: 898 AHGCD 902


>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 3   VAYGCDPA 10
           V YG DPA
Sbjct: 262 VVYGYDPA 269


Query: 2  IVAYGC 7
          ++AYGC
Sbjct: 8  LMAYGC 13


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1932 AVGCDP 1937


Query: 4   AYGCD 8
           A+GCD
Sbjct: 898 AHGCD 902


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 4    AYGCDP 9
            A GCDP
Sbjct: 1940 ASGCDP 1945


Query: 4   AYGCD 8
           A+GCD
Sbjct: 906 AHGCD 910


>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)

Query: 4   AYGCDP 9
            YGC P
Sbjct: 218 GYGCSP 223


>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   AYGCDP 9
            YGC P
Sbjct: 218 GYGCSP 223


>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   VAYGCDPA 10
           +AY CD A
Sbjct: 641 MAYACDNA 648


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   VAYGCDPA 10
           +AY CD A
Sbjct: 641 MAYACDNA 648


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 3   VAYGCDPA 10
           +AY CD A
Sbjct: 557 MAYACDVA 564


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3    VAYGC 7
            VAYGC
Sbjct: 2388 VAYGC 2392


Query: 5   YGCD 8
           YGCD
Sbjct: 256 YGCD 259


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 3   VAYGCDPA 10
           +A+GCD A
Sbjct: 254 LAFGCDAA 261


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3    VAYGC 7
            VAYGC
Sbjct: 2388 VAYGC 2392


Query: 5   YGCD 8
           YGCD
Sbjct: 256 YGCD 259


>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Query: 5   YGCDPA 10
           +GC+PA
Sbjct: 763 WGCNPA 768


>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)

Query: 5  YGCDPA 10
          YGC P+
Sbjct: 36 YGCYPS 41


>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   AYGCDPA 10
            YGC P 
Sbjct: 378 GYGCPPG 384


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 3   VAYGCD 8
           VAY CD
Sbjct: 210 VAYFCD 215


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 5   YGCD 8
           YGCD
Sbjct: 232 YGCD 235


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 5   YGCD 8
           YGCD
Sbjct: 232 YGCD 235


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1272 AYGVDP 1277


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1271 AYGIDP 1276


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 5   YGCD 8
           YGCD
Sbjct: 232 YGCD 235


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1272 AYGVDP 1277


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 5   YGCD 8
           YGCD
Sbjct: 232 YGCD 235


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 5   YGCD 8
           YGCD
Sbjct: 232 YGCD 235


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 5   YGCD 8
           YGCD
Sbjct: 232 YGCD 235


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1279 AYGIDP 1284


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1277 AYGIDP 1282


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1277 AYGIDP 1282


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 4    AYGCDP 9
            AYG DP
Sbjct: 1276 AYGIDP 1281


>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6   GCDPA 10
           GCDP 
Sbjct: 144 GCDPG 148


>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 6   GCDPA 10
           GCDP 
Sbjct: 144 GCDPG 148


>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 6   GCDPA 10
           GCDP 
Sbjct: 144 GCDPG 148




46|SequenceR|235|226|SACGFAIVAY

>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   CGFAIVAY 10
           CGFA+++Y
Sbjct: 615 CGFALLSY 622


>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   CGFAIVAY 10
           CGFA+++Y
Sbjct: 615 CGFALLSY 622


>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   CGFAIVAY 10
           CGFA+++Y
Sbjct: 615 CGFALLSY 622


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 1    SACGFAIVAY 10
            +ACG  I AY
Sbjct: 1406 AACGLLIAAY 1415


>sp|YVCD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  SACGFAIVAY 10
          S  GF +VAY
Sbjct: 17 STLGFDVVAY 26


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 1   SACGFAIVA 9
           S CGF + A
Sbjct: 500 SRCGFIVYA 508


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1    SACGFAIVA 9
            S CGF + A
Sbjct: 1317 SFCGFTVNA 1325




47|SequenceR|240|231|TLKPCSACGF

>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   TLKPCSAC 8
           T+ PCSAC
Sbjct: 150 TVYPCSAC 157


>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   TLKPCSAC 8
           T+ PCSAC
Sbjct: 150 TVYPCSAC 157


>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)

Query: 1  TLKPCSACG 9
          +L+P S CG
Sbjct: 31 SLRPVSLCG 39


>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   TLKPCSACGF 10
           T K C  CGF
Sbjct: 608 TQKSCIFCGF 617


>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   TLKPCSACGF 10
           T K C  CGF
Sbjct: 608 TQKSCIFCGF 617


>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1   TLKPCSACGF 10
           T K C  CGF
Sbjct: 608 TQKSCIFCGF 617


>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)

Query: 1   TLKPCSAC 8
           T KP SAC
Sbjct: 253 TSKPASAC 260


>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B

Query: 4   PCSACG 9
           PCS CG
Sbjct: 172 PCSICG 177


>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B

Query: 4   PCSACG 9
           PCS CG
Sbjct: 172 PCSICG 177


>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B

Query: 4   PCSACG 9
           PCS CG
Sbjct: 172 PCSICG 177


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    PCSACGF 10
            PC+  GF
Sbjct: 1122 PCNTSGF 1128


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    PCSACGF 10
            PC+  GF
Sbjct: 1122 PCNTSGF 1128


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    PCSACGF 10
            PC+  GF
Sbjct: 1122 PCNTSGF 1128


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    PCSACGF 10
            PC+  GF
Sbjct: 1122 PCNTSGF 1128


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    PCSACGF 10
            PC+  GF
Sbjct: 1122 PCNTSGF 1128


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 4   PCSACGF 10
           PC+ C F
Sbjct: 498 PCNLCTF 504


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 5    CSACGF 10
            C ACG 
Sbjct: 2478 CQACGL 2483


>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain

Query: 4  PCSAC 8
          PC AC
Sbjct: 42 PCPAC 46


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 4   PCSACGF 10
           PC+ C F
Sbjct: 498 PCNLCTF 504


>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)

Query: 4  PCSAC 8
          PC AC
Sbjct: 42 PCPAC 46


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 4   PCSACGF 10
           PC+ C F
Sbjct: 498 PCNLCTF 504


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 4   PCSACGF 10
           PC+ C F
Sbjct: 498 PCNLCTF 504


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 4   PCSACGF 10
           PC+ C F
Sbjct: 498 PCNLCTF 504


>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)

Query: 1   TLKPCSAC 8
           T +P SAC
Sbjct: 253 TSQPASAC 260


>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)

Query: 1   TLKPCSAC 8
           T +P SAC
Sbjct: 253 TSQPASAC 260


>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)

Query: 1   TLKPCSAC 8
           T +P SAC
Sbjct: 253 TSQPASAC 260


>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann

Query: 1   TLKPCSAC 8
           T +P SAC
Sbjct: 253 TSQPASAC 260


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4    PCSAC 8
            PCS C
Sbjct: 2287 PCSVC 2291


>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus

Query: 4  PCSAC 8
          PC AC
Sbjct: 42 PCPAC 46


>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate

Query: 4  PCSAC 8
          PC AC
Sbjct: 42 PCPAC 46


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 2   LKPCSAC 8
           L  CSAC
Sbjct: 540 LATCSAC 546


>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United

Query: 4  PCSACG 9
          PC  CG
Sbjct: 51 PCDYCG 56


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4    PCSAC 8
            PCS C
Sbjct: 2287 PCSVC 2291


>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)

Query: 1   TLKPCSACG 9
           TLK   ACG
Sbjct: 513 TLKYARACG 521


>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)

Query: 1   TLKPCSACG 9
           TLK   ACG
Sbjct: 513 TLKYARACG 521


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4   PCSAC 8
           PC AC
Sbjct: 369 PCPAC 373


Query: 4    PCSAC 8
            PCS C
Sbjct: 2264 PCSIC 2268


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   PCSAC 8
           PCS C
Sbjct: 496 PCSLC 500


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 3   KPCSACG 9
           +PC  CG
Sbjct: 349 QPCFRCG 355


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 4   PCSAC 8
           PCS C
Sbjct: 496 PCSLC 500


>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25

Query: 2  LKPCSACG 9
          L PC+ CG
Sbjct: 42 LVPCNFCG 49


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 3   KPCSACG 9
           +PC  CG
Sbjct: 349 QPCFRCG 355


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 5    CSACG 9
            C ACG
Sbjct: 1082 CPACG 1086


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 5    CSACG 9
            C ACG
Sbjct: 1060 CGACG 1064


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 5    CSACG 9
            C ACG
Sbjct: 1060 CGACG 1064


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 2   LKPCSACG 9
           LK C  CG
Sbjct: 721 LKECLYCG 728


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   LKPCSACG 9
           LK C  CG
Sbjct: 721 LKECLYCG 728


>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2

Query: 2  LKPCS 6
          LKPCS
Sbjct: 91 LKPCS 95


>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6

Query: 2  LKPCS 6
          LKPCS
Sbjct: 91 LKPCS 95


>sp|PG146_MONPV|PROTEIN OPG146|Monkeypox virus (MPXV)

Query: 5  CSACG 9
          CSACG
Sbjct: 62 CSACG 66


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 3   KPCSACG 9
           +PC  CG
Sbjct: 349 QPCFRCG 355


>sp|US02_HHV11|PROTEIN US2|Human herpesvirus 1 (strain 17)

Query: 3   KPCSAC 8
           +PC AC
Sbjct: 242 RPCCAC 247


>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus

Query: 5   CSACGF 10
           CS CGF
Sbjct: 150 CSPCGF 155


>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate

Query: 5   CSACGF 10
           CS CGF
Sbjct: 150 CSPCGF 155


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 3   KPCSACG 9
           +PC  CG
Sbjct: 349 QPCFRCG 355


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   CSACG 9
           C ACG
Sbjct: 472 CEACG 476


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   CSACG 9
           C ACG
Sbjct: 472 CEACG 476


>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12

Query: 2  LKPCSACG 9
          L PC+ CG
Sbjct: 36 LVPCNFCG 43


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 3   KPCSACG 9
           +PC  CG
Sbjct: 349 QPCFRCG 355


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 2  LKPCSACG 9
          L PC+ CG
Sbjct: 47 LVPCNFCG 54


>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21

Query: 2  LKPCSACG 9
          L PC+ CG
Sbjct: 52 LVPCNFCG 59


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 3   KPCSACG 9
           +PC  CG
Sbjct: 349 QPCFRCG 355




48|SequenceR|245|236|GERGCTLKPC

>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 2   ERGCTLKPC 10
           +R C  +PC
Sbjct: 414 QRSCLRRPC 422


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 2   ERGCTLKPC 10
           +R C  +PC
Sbjct: 413 QRSCLRRPC 421


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 2   ERGCTLKPC 10
           +R C  +PC
Sbjct: 413 QRSCLRRPC 421


>sp|U13_HHV6U|UNCHARACTERIZED protein U13|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   ERGCTLKP 9
           E  CTL P
Sbjct: 97  EHNCTLSP 104


>sp|U13_HHV6Z|UNCHARACTERIZED protein U13|Human herpesvirus 6B (strain Z29)

Query: 2   ERGCTLKP 9
           E  CTL P
Sbjct: 98  ENNCTLSP 105


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 2  ERGCTLKP 9
          +RG +LKP
Sbjct: 50 KRGLSLKP 57


>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 154 GENNCLLHP 162


>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 154 GENNCLLHP 162


>sp|US20_HCMVT|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3  RGCTLKPC 10
          RG T  PC
Sbjct: 57 RGVTTSPC 64


>sp|US20_HCMVA|TRANSMEMBRANE protein HWLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  RGCTLKPC 10
          RG T  PC
Sbjct: 57 RGVTTSPC 64


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   GERGC 5
           GE+GC
Sbjct: 171 GEKGC 175


>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 169 GENNCLLHP 177


>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 159 GENNCLLHP 167


>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   GCTLKP 9
           GC+L P
Sbjct: 352 GCSLNP 357


>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)

Query: 4  GCTLKP 9
          GC+L P
Sbjct: 91 GCSLNP 96


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 2   ERGCTLKP 9
           +RG T KP
Sbjct: 108 DRGPTFKP 115


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 2   ERGCTLKP 9
           +RG T KP
Sbjct: 108 DRGPTFKP 115


>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 162 GENNCLLHP 170


>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 168 GENNCLLHP 176


>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 161 GENNCLLHP 169


>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 159 GENNCLLHP 167


>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 3   RGCTLKPC 10
           + CT+K C
Sbjct: 189 QSCTIKVC 196


>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 3   RGCTLKPC 10
           + CT+K C
Sbjct: 189 QSCTIKVC 196


>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 3   RGCTLKPC 10
           + CT+K C
Sbjct: 189 QSCTIKVC 196


>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 3   RGCTLKPC 10
           + CT+K C
Sbjct: 189 QSCTIKVC 196


>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 159 GENNCLLHP 167


>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 157 GENNCLLHP 165


>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKP 9
           GE  C L P
Sbjct: 156 GENNCLLHP 164


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   GERGCTLKPC 10
           GE G    PC
Sbjct: 396 GENGTITLPC 405


>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   GERGC 5
           GE+GC
Sbjct: 165 GEQGC 169


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 2   ERGCTLKP 9
           ER C L+P
Sbjct: 110 ERVCLLRP 117


>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTIKVC 196


>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1   GERGCTLKPC 10
           GE  C L P 
Sbjct: 160 GENNCLLHPA 169


>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTH4|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196


>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTLKPC 10
           CT+K C
Sbjct: 191 CTVKVC 196




49|SequenceR|250|241|FETGCGERGC

>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 2   ETGCGERGC 10
           +T CG R C
Sbjct: 178 DTACGIRSC 186


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 1   FETGCGER 8
           FE+G GE+
Sbjct: 609 FESGLGEK 616


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2391 GCSKSGC 2397


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2391 GCSKSGC 2397


>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)

Query: 2   ETGCGERG 9
           ETG  ERG
Sbjct: 110 ETGGNERG 117


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1   FETGCGER 8
           +ET C ER
Sbjct: 360 YETLCAER 367


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3   TGCGER 8
           TGC ER
Sbjct: 449 TGCSER 454


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2429 GCNKAGC 2435


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2449 GCNKAGC 2455


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2479 GCNKAGC 2485


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2429 GCNKAGC 2435


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2449 GCNKAGC 2455


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4    GCGERGC 10
            GC + GC
Sbjct: 2479 GCNKAGC 2485


>sp|CEP2_HCMVA|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   TGCGERGC 10
           T CG+ GC
Sbjct: 217 TACGQAGC 224


>sp|CEP2_HCMVM|CYTOPLASMIC envelopment protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   TGCGERGC 10
           T CG+ GC
Sbjct: 217 TACGQAGC 224


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 5    CGERGC 10
            CG+R C
Sbjct: 2698 CGQRRC 2703


Query: 3   TGCGER 8
           TGC ER
Sbjct: 449 TGCPER 454


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 4    GCGERGC 10
            GC E GC
Sbjct: 1067 GCEEFGC 1073


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4    GCGERG 9
             CG+RG
Sbjct: 1083 ACGKRG 1088


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 4    GCGERGC 10
            GC E GC
Sbjct: 1067 GCEEFGC 1073


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 4    GCGERGC 10
            GC E GC
Sbjct: 1059 GCEEFGC 1065


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 4    GCGERGC 10
            GC E GC
Sbjct: 1067 GCEEFGC 1073


>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)

Query: 1  FETGC 5
          FETGC
Sbjct: 33 FETGC 37


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 5    CGERG 9
            CG+RG
Sbjct: 1084 CGKRG 1088


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 5    CGERG 9
            CG+RG
Sbjct: 1085 CGKRG 1089


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 5    CGERG 9
            CG+RG
Sbjct: 1085 CGKRG 1089


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 5    CGERG 9
            CG+RG
Sbjct: 1085 CGKRG 1089


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 3   TGCGER 8
           TGC ER
Sbjct: 450 TGCPER 455


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 5    CGERG 9
            CG+RG
Sbjct: 1013 CGKRG 1017




50|SequenceR|255|246|KCHYCFETGC

>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1677 YCLATGC 1683


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1677 YCLATGC 1683


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1677 YCLATGC 1683


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1677 YCLATGC 1683


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1677 YCLATGC 1683


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1677 YCLATGC 1683


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1673 YCLSTGC 1679


Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1673 YCLSTGC 1679


Query: 5    CFETGC 10
            C++TGC
Sbjct: 1520 CYDTGC 1525


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4    YCFETGC 10
            YC  TGC
Sbjct: 1673 YCLSTGC 1679


Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 2    CHYCFETGC 10
            C  CF T C
Sbjct: 1027 CQQCFATKC 1035


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   CHYCFETG 9
           CH C++T 
Sbjct: 480 CHTCYQTA 487


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   CHYCFETG 9
           CH C++T 
Sbjct: 480 CHTCYQTA 487


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1   KCHYCFETG 9
           +C YC E G
Sbjct: 501 QCAYCKEKG 509


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1   KCHYCFETG 9
           +C YC E G
Sbjct: 501 QCAYCKEKG 509


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1   KCHYCFETG 9
           +C YC E G
Sbjct: 501 QCAYCKEKG 509


>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1   KCHYCFETG 9
           +C YC E G
Sbjct: 501 QCAYCKEKG 509


>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1   KCHYCFETG 9
           +C YC E G
Sbjct: 501 QCAYCKEKG 509


>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1   KCHYCFETG 9
           +C YC E G
Sbjct: 501 QCAYCKEKG 509


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 3   HYCFETGC 10
           HYC   GC
Sbjct: 887 HYCLSPGC 894


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 3   HYCFETGC 10
           HYC   GC
Sbjct: 887 HYCLSPGC 894


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1675 YCLSVGC 1681


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1681 YCLSVGC 1687


Query: 5    CFETGC 10
            C++ GC
Sbjct: 1528 CYDAGC 1533


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 3   HYCFETGC 10
           HYC   GC
Sbjct: 879 HYCVSAGC 886


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1674 YCLSVGC 1680


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1679 YCLSVGC 1685


Query: 5    CFETGC 10
            C++ GC
Sbjct: 1526 CYDAGC 1531


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1679 YCLSVGC 1685


Query: 5    CFETGC 10
            C++ GC
Sbjct: 1526 CYDAGC 1531


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1677 YCLSVGC 1683


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1678 YCLSVGC 1684


>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P

Query: 2   CHYCFET 8
           C++CF+T
Sbjct: 169 CNFCFKT 175


>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1   KCHYCFETG 9
           K  YC ETG
Sbjct: 479 KKSYCNETG 487


>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain

Query: 1   KCHYCFETG 9
           K  YC ETG
Sbjct: 479 KKSYCNETG 487


>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1   KCHYCFETG 9
           K  YC ETG
Sbjct: 479 KKSYCNETG 487


>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann

Query: 1   KCHYCFETG 9
           K  YC ETG
Sbjct: 479 KKSYCNETG 487


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 5   CFETGC 10
           CF +GC
Sbjct: 540 CFVSGC 545


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 5   CFETGC 10
           CF +GC
Sbjct: 541 CFVSGC 546


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 4    YCFETGC 10
            YC   GC
Sbjct: 1678 YCLTVGC 1684


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1    KCHYC 5
            KC YC
Sbjct: 1958 KCKYC 1962


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1    KCHYC 5
            KC YC
Sbjct: 1958 KCKYC 1962


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1    KCHYC 5
            KC YC
Sbjct: 1958 KCKYC 1962


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1   KCHYCFET 8
           KC +C ET
Sbjct: 322 KCDHCGET 329


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1   KCHYCFET 8
           KC +C ET
Sbjct: 322 KCDHCGET 329


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1525 CYDAGC 1530


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 1   KCHYC 5
           +C YC
Sbjct: 227 RCQYC 231


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 1   KCHYC 5
           +C YC
Sbjct: 227 RCQYC 231


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 5    CFETGC 10
            C+E GC
Sbjct: 4545 CYEGGC 4550


>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 3   HYCFETG 9
           H+ +ETG
Sbjct: 225 HFAYETG 231


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 3   HYCFETGC 10
           H+C   GC
Sbjct: 887 HFCLSPGC 894


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 5    CFETGC 10
            CF T C
Sbjct: 1458 CFNTDC 1463


>sp|VEMP_CVHNL|ENVELOPE small membrane protein|Human coronavirus NL63 (HCoV-NL63)

Query: 2  CHYCF 6
          CHY F
Sbjct: 42 CHYFF 46


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1521 CYDAGC 1526


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1521 CYDAGC 1526


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)

Query: 5   CFETG 9
           C+ETG
Sbjct: 328 CYETG 332


>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)

Query: 5   CFETG 9
           C+ETG
Sbjct: 328 CYETG 332


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    CFETGC 10
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 1   KCHYC 5
           +C YC
Sbjct: 218 RCEYC 222


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 1   KCHYC 5
           +C YC
Sbjct: 152 RCEYC 156


Query: 1    KCHYC 5
            KC YC
Sbjct: 1007 KCIYC 1011


>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)

Query: 3   HYCFETGC 10
           H C + GC
Sbjct: 344 HQCDDIGC 351


>sp|VE6_HPV09|PROTEIN E6|Human papillomavirus 9

Query: 1   KCHYCFE 7
           +C YCF+
Sbjct: 107 RCRYCFK 113




51|SequenceR|260|251|PHWIQKCHYC

>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 1   PHWIQKC 7
           P W+Q C
Sbjct: 410 PKWVQMC 416


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 4   IQKCHYC 10
           +Q+C YC
Sbjct: 216 VQRCEYC 222


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 4    IQKCHYC 10
            ++KC YC
Sbjct: 1956 VRKCKYC 1962


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLRCNRC 1320


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1313 HWHLRCNKC 1321


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 4    IQKCHYC 10
            ++KC YC
Sbjct: 1956 VRKCKYC 1962


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 4    IQKCHYC 10
            ++KC YC
Sbjct: 1956 VRKCKYC 1962


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 2    HWIQKCHYC 10
            HW  +C  C
Sbjct: 1312 HWHLRCQKC 1320


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 3   WIQKC 7
           W+QKC
Sbjct: 539 WLQKC 543


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   WIQKC 7
           W+QKC
Sbjct: 539 WLQKC 543


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 2   HWIQKCHYC 10
           H +Q+C +C
Sbjct: 218 HPVQRCEHC 226


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 2   HWIQKCH 8
           +W+Q+C 
Sbjct: 318 YWLQRCQ 324


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 1   PHWIQKCH 8
           P+W+QK  
Sbjct: 306 PYWLQKAQ 313


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 1   PHWIQKCH 8
           P+W+QK  
Sbjct: 306 PYWLQKAQ 313


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 2    HWIQKCHY 9
            +WI +C Y
Sbjct: 1478 NWISECSY 1485


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2    HWIQKCHYC 10
            HW  +C+ C
Sbjct: 1312 HWHLQCNRC 1320


>sp|UL140_HCMVM|PROTEIN UL140|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  WIQKC 7
          WIQ+C
Sbjct: 61 WIQRC 65


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 1   PHWIQKCH 8
           P+W+QK  
Sbjct: 307 PYWLQKAQ 314


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 1   PHWIQKCH 8
           P+W+QK  
Sbjct: 304 PYWLQKAQ 311


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 2   HWIQKCHYC 10
           H + +C YC
Sbjct: 148 HPVNRCEYC 156


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2    HWIQKCHY 9
            +WI +C Y
Sbjct: 1474 NWISECMY 1481


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2    HWIQKCHY 9
            +WI +C Y
Sbjct: 1474 NWISECMY 1481


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 1   PHWIQKCH 8
           P+W+QK  
Sbjct: 333 PYWLQKAQ 340


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 1   PHWIQKCH 8
           P WIQK  
Sbjct: 308 PLWIQKAQ 315


>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40

Query: 1   PHWIQKCH 8
           P WIQK  
Sbjct: 308 PLWIQKAQ 315


>sp|VE6_HPV03|PROTEIN E6|Human papillomavirus 3

Query: 2   HWIQKCHYC 10
           HW   C YC
Sbjct: 134 HWRGSCQYC 142


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 1   PHWIQKCH 8
           P WIQK  
Sbjct: 336 PLWIQKAQ 343


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 344 PEWIQR 349


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 334 PEWIQR 339


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 501 WISQTHY 507


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 503 WISQTHY 509


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 331 PEWIQR 336


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 330 PEWIQR 335


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 501 WISQTHY 507


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 502 WISQTHY 508


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 502 WISQTHY 508


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 502 WISQTHY 508


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 330 PEWIQR 335


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2    HWIQKCHY 9
            +WI +C Y
Sbjct: 1480 NWISECCY 1487


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2    HWIQKCHY 9
            +WI +C Y
Sbjct: 1480 NWISECCY 1487


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2    HWIQKCHY 9
            +WI +C Y
Sbjct: 1480 NWISECCY 1487


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 501 WISQTHY 507


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 502 WISQTHY 508


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 500 WISQTHY 506


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 501 WISQTHY 507


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 4   IQKCHYC 10
           + +C YC
Sbjct: 225 VHRCQYC 231


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 4   IQKCHYC 10
           + +C YC
Sbjct: 225 VHRCQYC 231


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 3  WIQKCH 8
          W+ +CH
Sbjct: 73 WLHRCH 78


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 337 PEWIQR 342


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 494 WISNTHY 500


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 494 WISNTHY 500


>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 331 PEWIQR 336


>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 494 WISNTHY 500


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 323 PEWIQR 328


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 494 WISNTHY 500


>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 339 PEWIQR 344


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 494 WISNTHY 500


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 1   PHWIQKCHYC 10
           P  +++C YC
Sbjct: 718 PDNLKECLYC 727


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   PHWIQKCHYC 10
           P  +++C YC
Sbjct: 718 PDNLKECLYC 727


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 3   WIQKCHY 9
           WI + HY
Sbjct: 502 WISQTHY 508


>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44

Query: 1   PHWIQKCH 8
           P W+QK  
Sbjct: 306 PFWLQKAQ 313


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 318 PEWIQR 323


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3    WIQKC 7
            WI++C
Sbjct: 1419 WIERC 1423


>sp|BNL2B_EBVA8|UNCHARACTERIZED protein BNLF2b|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 4  IQKCH 8
          IQ+CH
Sbjct: 68 IQRCH 72


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 1   PHWIQK 6
           P WIQ+
Sbjct: 319 PEWIQR 324


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 4  IQKCHYC 10
          +Q+C +C
Sbjct: 89 VQRCEHC 95


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 3   WIQKC 7
           WI KC
Sbjct: 370 WISKC 374


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 2   HWIQKC 7
           +W++KC
Sbjct: 255 YWMRKC 260


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 488 WISGSHY 494


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 3   WIQKCHYC 10
           W+Q  H C
Sbjct: 219 WLQDKHGC 226


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 3   WIQKCHYC 10
           W+Q  H C
Sbjct: 219 WLQDKHGC 226


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 3   WIQKCHYC 10
           W+Q  H C
Sbjct: 219 WLQDKHGC 226


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 499 WISASHY 505


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1   PHWIQKCH 8
           PH   +CH
Sbjct: 161 PHSSAECH 168


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1   PHWIQKCH 8
           PH   +CH
Sbjct: 161 PHSSAECH 168


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1   PHWIQKCH 8
           PH   +CH
Sbjct: 161 PHSSAECH 168


>sp|K7_HHV8P|PROTEIN K7|Human herpesvirus 8 type P

Query: 1  PHWIQKC 7
          PHW + C
Sbjct: 73 PHWPESC 79


>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B

Query: 5  QKCHY 9
          ++CHY
Sbjct: 19 RRCHY 23


>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 330 WIPASHY 336


>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)

Query: 3   WIQKCHY 9
           WI   HY
Sbjct: 328 WIPASHY 334


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 6    KCHYC 10
            KCH C
Sbjct: 1329 KCHNC 1333


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 6    KCHYC 10
            KCH C
Sbjct: 1329 KCHNC 1333


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 3   WIQKC 7
           WI KC
Sbjct: 385 WIWKC 389


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 4    IQKCHYC 10
            +Q CH C
Sbjct: 1196 VQTCHTC 1202


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 6    KCHYC 10
            KCH C
Sbjct: 1334 KCHNC 1338


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 4    IQKCHYC 10
            +Q CH C
Sbjct: 1175 VQACHTC 1181


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 4    IQKCHYC 10
            +Q CH C
Sbjct: 1175 VQACHTC 1181


>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65

Query: 3   WIQKC 7
           WI KC
Sbjct: 375 WIYKC 379


>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate

Query: 3   WIQKC 7
           W+ KC
Sbjct: 410 WLDKC 414


>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)

Query: 3   WIQKC 7
           W+ KC
Sbjct: 411 WLDKC 415




52|SequenceR|265|256|DCTQNPHWIQ

>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1   DCTQNP 6
           DC+QNP
Sbjct: 277 DCSQNP 282


>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12

Query: 5   NPHWI 9
           NPHW+
Sbjct: 395 NPHWL 399


>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5

Query: 5   NPHWI 9
           NPHW+
Sbjct: 387 NPHWL 391


>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2

Query: 5   NPHWI 9
           NPHW+
Sbjct: 387 NPHWL 391


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1    DCTQNPHW 8
            D TQ  HW
Sbjct: 1755 DATQKTHW 1762


>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   DCTQNPHWIQ 10
           +C  N HW++
Sbjct: 366 ECKPNIHWLK 375


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 4   QNPHWIQ 10
           +NP+W+Q
Sbjct: 922 RNPNWMQ 928


>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant

Query: 1   DCTQNPHWIQ 10
           +C  N HW++
Sbjct: 366 ECKPNIHWLK 375


>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB

Query: 5   NPHW 8
           NPHW
Sbjct: 232 NPHW 235


>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep

Query: 5   NPHW 8
           NPHW
Sbjct: 232 NPHW 235


>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)

Query: 5   NPHW 8
           NPHW
Sbjct: 232 NPHW 235


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1    DCTQNPHW 8
            D T N HW
Sbjct: 1912 DATNNIHW 1919


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1    DCTQNPHW 8
            D T N HW
Sbjct: 1912 DATNNIHW 1919


>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi

Query: 5   NPHW 8
           NPHW
Sbjct: 232 NPHW 235


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 5   NPHW 8
           NPHW
Sbjct: 512 NPHW 515


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1    DCTQNPHW 8
            D T N HW
Sbjct: 1912 DATNNIHW 1919


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 5   NPHW 8
           NPHW
Sbjct: 512 NPHW 515


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 5  NPHWI 9
          NPHW+
Sbjct: 71 NPHWL 75


>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1  DCTQNP 6
          DC +NP
Sbjct: 72 DCNENP 77


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  DCTQNP 6
          DC +NP
Sbjct: 72 DCNENP 77


>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  DCTQNP 6
          DC +NP
Sbjct: 72 DCNENP 77


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4   QNPHWI 9
            +PHW+
Sbjct: 533 HHPHWV 538


>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain

Query: 1   DCTQNPHWIQ 10
           DC  NP   Q
Sbjct: 355 DCVANPQMKQ 364


>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)

Query: 1   DCTQNPHWIQ 10
           DC  NP   Q
Sbjct: 355 DCVANPQMKQ 364


>sp|PHOSP_MUMPM|PHOSPHOPROTEIN virus genotype B (strain

Query: 1   DCTQNPHWIQ 10
           DC  NP   Q
Sbjct: 355 DCVANPQMKQ 364


>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain

Query: 1   DCTQNPHWIQ 10
           DC  NP   Q
Sbjct: 355 DCVANPQMKQ 364


>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)

Query: 1   DCTQNPHWIQ 10
           DC  NP   Q
Sbjct: 355 DCVANPQMKQ 364


>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)

Query: 1   DCTQNPHWIQ 10
           DC  NP   Q
Sbjct: 354 DCVANPQMKQ 363


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2192 PHWI 2195


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2196 PHWI 2199


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2196 PHWI 2199


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    DCTQNP 6
            DC +NP
Sbjct: 5602 DCARNP 5607


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 6    PHWI 9
            PHWI
Sbjct: 2195 PHWI 2198


>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 5   NPHWIQ 10
           NP+W++
Sbjct: 410 NPNWVK 415


>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)

Query: 1  DCTQNP 6
          DC +NP
Sbjct: 72 DCNENP 77


>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)

Query: 1  DCTQNP 6
          DC +NP
Sbjct: 72 DCNENP 77


>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)

Query: 1   DCTQNP 6
           DC +NP
Sbjct: 103 DCMKNP 108


>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)

Query: 1   DCTQNP 6
           DC +NP
Sbjct: 103 DCMKNP 108


>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)

Query: 1  DCTQNP 6
          DC +NP
Sbjct: 72 DCNENP 77


>sp|ORF2P_POL1M|ORF2P protein|Poliovirus type 1 (strain Mahoney)

Query: 1  DCTQNPHWI 9
          DC    +WI
Sbjct: 6  DCYHKANWI 14


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 2    CTQNP 6
            C QNP
Sbjct: 1645 CAQNP 1649


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    TQNPHW 8
            T+NP W
Sbjct: 5802 TRNPAW 5807


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    TQNPHW 8
            T+NP W
Sbjct: 5825 TRNPAW 5830


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   TQNPHW 8
           T N HW
Sbjct: 915 TSNKHW 920


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   TQNPHW 8
           T N HW
Sbjct: 915 TSNKHW 920


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 1   DCTQNPHWI 9
           DC  +PH +
Sbjct: 516 DCPPHPHLV 524


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   TQNPHW 8
           T N HW
Sbjct: 915 TSNKHW 920


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 3   TQNPHW 8
           T N HW
Sbjct: 915 TSNKHW 920


>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 6  PHWIQ 10
          PHWI+
Sbjct: 86 PHWIK 90


>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 6  PHWIQ 10
          PHWI+
Sbjct: 86 PHWIK 90


>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 6  PHWIQ 10
          PHWI+
Sbjct: 86 PHWIK 90


>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 6  PHWIQ 10
          PHWI+
Sbjct: 86 PHWIK 90


>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 6  PHWIQ 10
          PHWI+
Sbjct: 86 PHWIK 90


>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40

Query: 1   DCTQNP 6
           DC +NP
Sbjct: 136 DCPENP 141


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 3   TQNPHW 8
             NPHW
Sbjct: 128 VSNPHW 133


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 6  PHWIQ 10
          PHWI+
Sbjct: 82 PHWIK 86


>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41

Query: 1   DCTQNP 6
           DC +NP
Sbjct: 141 DCPENP 146


>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain

Query: 3   TQNPHW 8
           TQ+P W
Sbjct: 298 TQSPSW 303


>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   CTQNPHW 8
           CT+  +W
Sbjct: 431 CTKTTYW 437


>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human

Query: 1   DCTQNPHWI 9
           DC   PH +
Sbjct: 506 DCPLQPHLV 514


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 1  DCTQNP 6
          +CTQ P
Sbjct: 86 ECTQTP 91


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   CTQNPHW 8
           C Q P W
Sbjct: 867 CPQAPEW 873


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 5  NPHWI 9
          +PHW+
Sbjct: 21 DPHWV 25


>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   CTQNPHW 8
           C Q P W
Sbjct: 858 CPQAPEW 864




53|SequenceR|270|261|EQRAADCTQN

>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 4   AADCTQN 10
           A DC+QN
Sbjct: 275 AVDCSQN 281


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1   EQRAADCT 8
           +Q +ADCT
Sbjct: 347 QQPSADCT 354


>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6   DCTQN 10
           DCT+N
Sbjct: 104 DCTKN 108


>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)

Query: 1   EQRAADCT 8
           EQR   CT
Sbjct: 343 EQRIGQCT 350




54|SequenceR|275|266|LSQAREQRAA

 ***** No hits found ******


55|SequenceR|280|271|ITRLRLSQAR

>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 116 RLRLSQ 121


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 115 RLRLSQ 120


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 115 RLRLSQ 120


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 115 RLRLSQ 120


>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 116 RLRLSQ 121


>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 115 RLRLSQ 120


>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 115 RLRLSQ 120


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 3   RLRLSQ 8
           RLRLSQ
Sbjct: 115 RLRLSQ 120




56|SequenceR|285|276|ISSSRITRLR

>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1    ISSSRITRLR 10
            ++  R+TRLR
Sbjct: 1601 MTPERVTRLR 1610


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1    ISSSRITRLR 10
            ++  R+TRLR
Sbjct: 1602 MTPERVTRLR 1611


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1    ISSSRITRLR 10
            ++  R+TRLR
Sbjct: 1601 MTPERVTRLR 1610




57|SequenceR|290|281|EQSYSISSSR

>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1    EQSYSISSSR 10
            E+SY I +SR
Sbjct: 1467 EESYKIRTSR 1476




58|SequenceR|295|286|AAAGSEQSYS

>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41

Query: 2  AAGSEQSYS 10
          AAG+ Q YS
Sbjct: 20 AAGASQDYS 28


>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40

Query: 2  AAGSEQSYS 10
          AAG+ Q YS
Sbjct: 20 AAGASQDYS 28




59|SequenceR|300|291|PKIDDAAAGS

>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   PKIDDAAAGS 10
           PKI   AAGS
Sbjct: 264 PKIGLLAAGS 273


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   PKIDDAAAGS 10
           PKI   AAGS
Sbjct: 264 PKIGLLAAGS 273


>sp|C_PI1HE|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1  PKIDDAAAGS 10
          PK++   AGS
Sbjct: 38 PKLEKTEAGS 47


>sp|C_PI1HD|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1  PKIDDAAAGS 10
          PK++   AGS
Sbjct: 38 PKLEKTEAGS 47


>sp|C_PI1HC|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1  PKIDDAAAGS 10
          PK++   AGS
Sbjct: 38 PKLEKTEAGS 47


>sp|C_PI1HB|PROTEIN C|Human parainfluenza 1 virus (strain

Query: 1  PKIDDAAAGS 10
          PK++   AGS
Sbjct: 38 PKLEKTEAGS 47


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)

Query: 1  PKIDDA 6
          PK DDA
Sbjct: 14 PKYDDA 19


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  PKIDDA 6
          PK DDA
Sbjct: 14 PKYDDA 19


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 5   DAAAGS 10
           DAAAGS
Sbjct: 644 DAAAGS 649


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 5   DAAAGS 10
           DAAAGS
Sbjct: 644 DAAAGS 649




60|SequenceR|305|296|ACRPCPKIDD

>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 2    CRPCPKID 9
            C+ CPKI+
Sbjct: 1079 CKRCPKIE 1086


>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  RPCPKIDD 10
          RP PK DD
Sbjct: 11 RPTPKYDD 18


>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)

Query: 3  RPCPKIDD 10
          RP PK DD
Sbjct: 11 RPTPKYDD 18


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 1   ACRPCP 6
           AC PCP
Sbjct: 662 ACGPCP 667


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 1   ACRPCP 6
           AC PCP
Sbjct: 662 ACGPCP 667


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 3    RPCPKIDD 10
            +PCP+I +
Sbjct: 1615 KPCPRIQN 1622


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 1   ACRPCP 6
           AC PCP
Sbjct: 662 ACGPCP 667


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 1   ACRPCPKI 8
           AC  CP+I
Sbjct: 422 ACATCPQI 429


>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40

Query: 2   CRPC 5
           CRPC
Sbjct: 433 CRPC 436


>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  CRPCP 6
          CRPCP
Sbjct: 82 CRPCP 86


>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  CRPCP 6
          CRPCP
Sbjct: 82 CRPCP 86


>sp|PG087_VARV|LATE transcription elongation factor OPG087|Variola virus

Query: 3  RPCPKIDD 10
          RPC K+ D
Sbjct: 91 RPCYKLGD 98


>sp|PG087_VAR67|LATE transcription elongation factor OPG087|Variola virus (isolate

Query: 3  RPCPKIDD 10
          RPC K+ D
Sbjct: 91 RPCYKLGD 98


>sp|PG087_VACCC|LATE transcription elongation factor OPG087|Vaccinia virus (strain

Query: 3  RPCPKIDD 10
          RPC K+ D
Sbjct: 91 RPCYKLGD 98


>sp|PG087_MONPV|LATE transcription elongation factor OPG087|Monkeypox virus (MPXV)

Query: 3  RPCPKIDD 10
          RPC K+ D
Sbjct: 91 RPCYKLGD 98


>sp|IL1BP_MONPV|INTERLEUKIN-1-BINDING protein|Monkeypox virus (MPXV)

Query: 4  PCPKID 9
          PCP+I+
Sbjct: 47 PCPQIN 52


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 2   CRPC 5
           CRPC
Sbjct: 429 CRPC 432


>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  CRPCPKIDD 10
          CR  P++D+
Sbjct: 70 CRYTPRLDE 78


>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)

Query: 2   CRPCP 6
           C PCP
Sbjct: 663 CGPCP 667


>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human

Query: 2   CRPCP 6
           C PCP
Sbjct: 663 CGPCP 667


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 4  PCPKID 9
          PCP+I+
Sbjct: 47 PCPQIN 52


>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1   ACRPCPKI 8
           AC  CP++
Sbjct: 422 ACATCPQL 429


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 5   CPKID 9
           CPK+D
Sbjct: 179 CPKLD 183


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    CRPCP 6
            CR CP
Sbjct: 5765 CRRCP 5769


>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)

Query: 4  PCPKID 9
          PCP+I+
Sbjct: 47 PCPQIN 52


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   ACRPCPKID 9
           +CRP  K D
Sbjct: 458 SCRPIDKFD 466


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    CRPCP 6
            CR CP
Sbjct: 5742 CRRCP 5746


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 6   PKIDD 10
           PKIDD
Sbjct: 139 PKIDD 143


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 4   PCPKI 8
           PCP I
Sbjct: 710 PCPSI 714


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 1   ACRPCPKID 9
           +CRP  K D
Sbjct: 459 SCRPIDKFD 467


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 6   PKIDD 10
           PKIDD
Sbjct: 139 PKIDD 143


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 6   PKIDD 10
           PKIDD
Sbjct: 139 PKIDD 143


>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35

Query: 3   RPCPKIDD 10
           R C K+DD
Sbjct: 414 RRCEKVDD 421


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 3   RPCP 6
           RPCP
Sbjct: 123 RPCP 126


>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human

Query: 3   RPCP 6
           RPCP
Sbjct: 123 RPCP 126


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4   PCPKI 8
           PCP I
Sbjct: 710 PCPSI 714


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 3   RPCP 6
           RPCP
Sbjct: 119 RPCP 122


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 3   RPCP 6
           RPCP
Sbjct: 119 RPCP 122


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 1   ACRPCPKID 9
           +CRP  K D
Sbjct: 459 SCRPIDKFD 467


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 4   PCPKID 9
           P PK+D
Sbjct: 269 PLPKVD 274


>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)

Query: 1   ACRPCPKIDD 10
           A  PC  ID+
Sbjct: 252 ALSPCVSIDN 261


>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)

Query: 1   ACRPCP 6
           ACRP P
Sbjct: 679 ACRPGP 684


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 3   RPCPKIDD 10
           +P P +DD
Sbjct: 241 KPLPTMDD 248


>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant

Query: 1   ACRPCPKIDD 10
           A  PC  ID+
Sbjct: 252 ALSPCVSIDN 261


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 2   CRPC 5
           CRPC
Sbjct: 450 CRPC 453


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 3   RPCP 6
           RPCP
Sbjct: 119 RPCP 122


>sp|UL81_HCMVA|UNCHARACTERIZED protein UL81|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  CRPCPKID 9
          C PCP+ D
Sbjct: 31 CGPCPRHD 38


>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62

Query: 1   ACRPCPKID 9
           A  P PK+D
Sbjct: 432 AASPSPKVD 440


>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)

Query: 5  CPKIDD 10
          CP I+D
Sbjct: 73 CPPIED 78


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1   ACRPCPKI 8
            C PC K+
Sbjct: 225 GCVPCEKV 232


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 5   CPKIDD 10
           C KIDD
Sbjct: 579 CGKIDD 584


>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain

Query: 5   CPKID 9
           CPK+D
Sbjct: 387 CPKVD 391


>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 5  CPKIDD 10
          CP I+D
Sbjct: 73 CPPIED 78


>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus

Query: 5  CPKIDD 10
          CP I+D
Sbjct: 76 CPPIED 81


>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate

Query: 5  CPKIDD 10
          CP I+D
Sbjct: 76 CPPIED 81


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 2   CRPC 5
           CRPC
Sbjct: 451 CRPC 454


>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)

Query: 5   CPKID 9
           CPK+D
Sbjct: 388 CPKVD 392


>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain

Query: 5  CPKIDD 10
          CP I+D
Sbjct: 75 CPPIED 80


>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 4   PCPKID 9
           P PKID
Sbjct: 305 PSPKID 310


>sp|VP35_EBORR|POLYMERASE cofactor VP35|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 4   PCPKID 9
           P PKID
Sbjct: 305 PSPKID 310


>sp|VP35_EBORE|POLYMERASE cofactor VP35|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 4   PCPKID 9
           P PKID
Sbjct: 305 PSPKID 310


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 1   ACRPCPKI 8
            C PC K+
Sbjct: 225 GCVPCEKV 232




61|SequenceR|310|301|KIIYAACRPC

>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1

Query: 3   IYAACRPC 10
           +YA+ RPC
Sbjct: 451 VYASARPC 458


>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41

Query: 5   AACRPC 10
           A CRPC
Sbjct: 427 ARCRPC 432


>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 1   KIIYAAC 7
           K+I+AAC
Sbjct: 247 KVIHAAC 253


>sp|PG067_MONPV|PROTEIN OPG067|Monkeypox virus (MPXV)

Query: 1   KIIYAACRPC 10
           K+IYA C  C
Sbjct: 103 KMIYARCFTC 112


>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)

Query: 3  IYAACRPC 10
          +Y+  RPC
Sbjct: 33 VYSVGRPC 40


>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)

Query: 2   IIYAACR 8
           I+YA CR
Sbjct: 375 IVYANCR 381


>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4   YAACRP 9
           YAAC P
Sbjct: 126 YAACVP 131


>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4   YAACRP 9
           YAAC P
Sbjct: 126 YAACVP 131


>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4   YAACRP 9
           YAAC P
Sbjct: 126 YAACVP 131


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 1   KIIYAAC 7
           KII+A+C
Sbjct: 253 KIIHASC 259


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 1   KIIYAAC 7
           KII+A+C
Sbjct: 253 KIIHASC 259


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    KIIYAAC 7
            +I+Y AC
Sbjct: 5627 RIVYTAC 5633


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    KIIYAAC 7
            +I+Y AC
Sbjct: 5604 RIVYTAC 5610


>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United

Query: 1   KIIYAACRP 9
           K+I+AA  P
Sbjct: 118 KVIFAAVPP 126


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   KIIYAACR 8
           KI+  ACR
Sbjct: 828 KIVQRACR 835


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 6   ACRPC 10
           AC PC
Sbjct: 662 ACGPC 666


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 6   ACRPC 10
           AC PC
Sbjct: 662 ACGPC 666


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 6   ACRPC 10
           AC PC
Sbjct: 662 ACGPC 666


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   YAACRP 9
           +A CRP
Sbjct: 203 FARCRP 208


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 1   KIIYAACRP 9
           KI+ + C+P
Sbjct: 789 KILGSVCKP 797


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 1   KIIYAACRP 9
           KI+ + C+P
Sbjct: 789 KILGSVCKP 797


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KIIYAACRP 9
           KI+ + C+P
Sbjct: 789 KILGSVCKP 797


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1   KIIYAACRP 9
           KI+ + C+P
Sbjct: 789 KILGSVCKP 797


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 1   KIIYAACRP 9
           KI+ + C+P
Sbjct: 789 KILGSVCKP 797


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 4   YAACRP 9
           +A CRP
Sbjct: 334 FARCRP 339


>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   IIYAACRPC 10
           ++  ACR C
Sbjct: 182 LVRHACRDC 190


>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   IIYAACRPC 10
           ++  ACR C
Sbjct: 182 LVRHACRDC 190


>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)

Query: 2   IIYAACRPC 10
           ++  ACR C
Sbjct: 182 LVRHACRDC 190


>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  KIIYAACR 8
          KI+Y +C+
Sbjct: 5  KILYDSCK 12


>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   IIYAACRPC 10
           ++  ACR C
Sbjct: 182 LVRHACRDC 190


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 4   YAACRP 9
           +A CRP
Sbjct: 272 FARCRP 277


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 2  IIYAACRPC 10
          ++YA CR C
Sbjct: 78 LVYACCRWC 86


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3    IYAACRPC 10
            I  ACR C
Sbjct: 2703 IRIACRKC 2710


>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47

Query: 3  IYAACRPC 10
          +YA CR C
Sbjct: 69 VYACCRLC 76


>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)

Query: 1  KIIYAACR 8
          KI+Y +C+
Sbjct: 5  KILYDSCK 12


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    IYAACRPC 10
            I  ACR C
Sbjct: 2703 IRIACRKC 2710


Query: 1    KIIYAAC 7
            +++Y AC
Sbjct: 5613 RVVYTAC 5619




62|SequenceR|315|306|SGDNMKIIYA

>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1   SGDNMKI 7
           SGD+MKI
Sbjct: 227 SGDSMKI 233


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 1   SGDNMKI 7
           SGD+MKI
Sbjct: 227 SGDSMKI 233


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 1   SGDNMKI 7
           SGD+MKI
Sbjct: 227 SGDSMKI 233


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1   SGDNMKI 7
           SGD+MKI
Sbjct: 227 SGDSMKI 233


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 3   DNMKIIYA 10
           DN KI+++
Sbjct: 843 DNKKIVFS 850


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 3   DNMKIIYA 10
           DN KI+++
Sbjct: 716 DNKKIVFS 723


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 3   DNMKIIYA 10
           DN KI+++
Sbjct: 776 DNKKIVFS 783


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 3   DNMKIIYA 10
           DN KI+++
Sbjct: 852 DNKKIVFS 859


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 3   DNMKIIYA 10
           DN KI+++
Sbjct: 847 DNKKIVFS 854


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 3   DNMKIIYA 10
           DN KI+++
Sbjct: 852 DNKKIVFS 859


>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)

Query: 1   SGDNMKII 8
           +GD +K+I
Sbjct: 427 AGDRLKVI 434




63|SequenceR|320|311|TMHNCSGDNM

>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 5   CSGDNM 10
           C GDNM
Sbjct: 537 CQGDNM 542


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 4   NCSGDNM 10
           NC+ DN+
Sbjct: 345 NCTADNL 351


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 4   NCSGDNM 10
           NC+ DN+
Sbjct: 345 NCTADNL 351


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 4   NCSGDNM 10
           NC+ DN+
Sbjct: 344 NCTADNL 350


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 4   NCSGDNM 10
           NC+ DN+
Sbjct: 344 NCTADNL 350


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 4   NCSGDNM 10
           NC+ DN+
Sbjct: 344 NCTADNL 350


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 4   NCSGDNM 10
           NC+ DN+
Sbjct: 344 NCTADNL 350


>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain

Query: 4   NCSGDNM 10
           NCSG+N+
Sbjct: 464 NCSGENV 470


>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain

Query: 4   NCSGDNM 10
           NCSG+N+
Sbjct: 464 NCSGENV 470


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2    MHNCSGD 8
            MHN  GD
Sbjct: 2683 MHNSKGD 2689


>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  TMHNC 5
          T+HNC
Sbjct: 73 TLHNC 77


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   MHNCSGD 8
           M NC GD
Sbjct: 371 MLNCGGD 377


>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)

Query: 4   NCSGDNM 10
           NCSG N+
Sbjct: 464 NCSGKNV 470


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 184 MLNCVGDH 191


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 187 MLNCVGDH 194


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 190 MLNCVGDH 197


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 184 MLNCVGDH 191


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 187 MLNCVGDH 194


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 190 MLNCVGDH 197


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2   MHNCSGDN 9
           M NC GD+
Sbjct: 189 MLNCVGDH 196


>sp|VME1_CVH22|MEMBRANE protein|Human coronavirus 229E (HCoV-229E)

Query: 4 NCSGD 8
         NC+GD
Sbjct: 5 NCTGD 9


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2    MHNCSGDNM 10
            M N +GD+M
Sbjct: 1259 MQNPAGDDM 1267


>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)

Query: 5   CSGDNM 10
           C GDN+
Sbjct: 247 CKGDNL 252


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 3   HNCSG 7
           HNC G
Sbjct: 883 HNCRG 887


>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind

Query: 2   MHNCSGD 8
            +NCSGD
Sbjct: 215 FNNCSGD 221


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 3   HNCSGDN 9
            +CSGD+
Sbjct: 138 QSCSGDD 144


>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1   TMHNCSGDNM 10
           + H C+G N+
Sbjct: 187 SRHMCAGHNI 196


>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)

Query: 3   HNCSGDNM 10
           H C+G N+
Sbjct: 189 HMCAGHNI 196


>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P

Query: 4  NCSGDNM 10
          NCS +NM
Sbjct: 55 NCSYENM 61


>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain

Query: 2    MHNCSGD 8
            M++C GD
Sbjct: 1098 MYSCDGD 1104


>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)

Query: 2    MHNCSGD 8
            M++C GD
Sbjct: 1098 MYSCDGD 1104


>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)

Query: 1  TMHNCSGDNM 10
          ++HN  G N+
Sbjct: 17 SLHNVFGGNL 26


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 4   NCSGDNM 10
           NC GD +
Sbjct: 288 NCQGDEL 294


>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 1   TMHNCS 6
           T+H+CS
Sbjct: 278 TIHHCS 283




64|SequenceR|325|316|GCVACTMHNC

>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1    GCVACTMHNC 10
            GC+ C   NC
Sbjct: 2484 GCLFCYKRNC 2493


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    GCVACTMHNC 10
            GC+ C   NC
Sbjct: 2454 GCLFCYKRNC 2463


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    GCVACTMHNC 10
            GC+ C   NC
Sbjct: 2434 GCLFCYKRNC 2443


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    GCVACTMHNC 10
            GC+ C   NC
Sbjct: 2454 GCLFCYKRNC 2463


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    GCVACTMHNC 10
            GC+ C   NC
Sbjct: 2484 GCLFCYKRNC 2493


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    GCVACTMHNC 10
            GC+ C   NC
Sbjct: 2434 GCLFCYKRNC 2443


>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIQNC 249


>sp|VP7_ROTYO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHU|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHP|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHM|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTAM|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHK|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHJ|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTAD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHX|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHW|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40

Query: 1   GCVACTMH 8
           GC AC  H
Sbjct: 144 GCRACDFH 151


>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTH3|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 5   CTMHNC 10
           CT+ NC
Sbjct: 244 CTIRNC 249


>sp|V_PIV5|NON-STRUCTURAL protein V|Parainfluenza virus 5 (strain W3)

Query: 5   CTMHNC 10
           CT H C
Sbjct: 206 CTCHQC 211


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 3   VACTMHNC 10
           V CTM+ C
Sbjct: 736 VDCTMYIC 743


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1   GCVACTMHN 9
           GCV C + +
Sbjct: 225 GCVPCVLED 233


>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41

Query: 1   GCVACTMH 8
           GC AC  H
Sbjct: 149 GCRACDFH 156


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 5   CTMHN 9
           C MHN
Sbjct: 424 CKMHN 428


>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)

Query: 5   CTMHN 9
           C MHN
Sbjct: 152 CMMHN 156


>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)

Query: 5   CTMHNC 10
           CT H C
Sbjct: 668 CTFHIC 673


>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34

Query: 5   CTMHN 9
           CT+HN
Sbjct: 260 CTLHN 264


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    CVACTMHNC 10
            CV CT   C
Sbjct: 4676 CVNCTDDRC 4684


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 1   GCVACT 6
           GCV CT
Sbjct: 905 GCVGCT 910


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3   VACTMH 8
           + CT+H
Sbjct: 576 IGCTLH 581


>sp|VE5B_HPV6B|PROBABLE protein E5B|Human papillomavirus type 6b

Query: 2  CVACTMHNC 10
          C  C  HNC
Sbjct: 45 CKKCNKHNC 53


>sp|VE4_HPV33|PROTEIN E4|Human papillomavirus 33

Query: 2  CVACTMH 8
          CV  T+H
Sbjct: 73 CVVLTLH 79




65|SequenceR|330|321|WCFECGCVAC

>sp|VB20_VACCC|PROTEIN B20|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  CFECGCVA 9
          C+ CGC A
Sbjct: 36 CYRCGCTA 43


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1    WCFECGCVAC 10
            +C   GCV C
Sbjct: 1677 YCLATGCVVC 1686


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 5   CGCVAC 10
           CGCV C
Sbjct: 901 CGCVEC 906


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1   WCFECGCVA 9
           W F C C+ 
Sbjct: 518 WLFMCTCIG 526


>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)

Query: 5   CGCVAC 10
           CGCV C
Sbjct: 578 CGCVEC 583


>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)

Query: 4  ECGCV 8
          ECGC+
Sbjct: 17 ECGCI 21


>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 351 CFRCGQVG 358


>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 351 CFRCGQVG 358


>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 351 CFRCGQVG 358


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 363 CFRCGKVG 370


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 363 CFRCGKVG 370


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 363 CFRCGKVG 370


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 392 CFNCGKVG 399


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECGCVA 9
           CF CG V 
Sbjct: 392 CFNCGKVG 399


>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3

Query: 2   CFECG 6
           CF CG
Sbjct: 351 CFRCG 355


>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 2   CFECG 6
           CF CG
Sbjct: 351 CFRCG 355


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3

Query: 2   CFECG 6
           CF CG
Sbjct: 351 CFRCG 355


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   CFECG 6
           CF CG
Sbjct: 357 CFRCG 361


>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus

Query: 2   CFECG 6
           CF CG
Sbjct: 452 CFHCG 456


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 3   FECGCVAC 10
           F  GCV C
Sbjct: 157 FVVGCVPC 164


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 3   FECGCVAC 10
           F  GCV C
Sbjct: 157 FVVGCVPC 164


>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15

Query: 3   FECGCVAC 10
           F  GCV C
Sbjct: 157 FVVGCVPC 164


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 394 CFNCG 398


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 395 CFNCG 399


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 394 CFNCG 398


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 386 CFNCG 390


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 386 CFNCG 390


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 390 CFNCG 394


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 396 CFNCG 400


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 395 CFNCG 399


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 398 CFNCG 402


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 389 CFNCG 393


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 396 CFNCG 400


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 394 CFNCG 398


>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 389 CFNCG 393


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 394 CFNCG 398


>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 395 CFNCG 399


>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 394 CFNCG 398


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 386 CFNCG 390


>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 386 CFNCG 390


>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 390 CFNCG 394


>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 396 CFNCG 400


>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 395 CFNCG 399


>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 398 CFNCG 402


>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 391 CFNCG 395


>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 389 CFNCG 393


>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 392 CFNCG 396


>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 396 CFNCG 400


>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 394 CFNCG 398


>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 387 CFNCG 391


>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 389 CFNCG 393


>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   CFECG 6
           CF CG
Sbjct: 393 CFNCG 397


>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1  WCFEC 5
          WC EC
Sbjct: 41 WCVEC 45


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 2   CFECGCVAC 10
           CF+  CV C
Sbjct: 285 CFQPPCVPC 293


>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   WCFECGCVAC 10
           W     C+AC
Sbjct: 369 WALTLICIAC 378


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 2   CFE-CGCVAC 10
           CFE CG + C
Sbjct: 933 CFEQCGAIGC 942


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 2   CFECGCVAC 10
           CF+  CV C
Sbjct: 285 CFQPPCVPC 293


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 1   WCFECG 6
           WC +CG
Sbjct: 338 WCADCG 343


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    CFECGCV 8
            C+E GC+
Sbjct: 4545 CYEGGCI 4551


>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 4   ECGCVAC 10
           ECG V C
Sbjct: 420 ECGRVEC 426


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 4   ECGCVAC 10
           ECG V C
Sbjct: 420 ECGRVEC 426


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3   FECGCVA 9
           F CGC A
Sbjct: 355 FACGCGA 361


Query: 1    WCFECG 6
            WC  CG
Sbjct: 1671 WCNVCG 1676


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 2   CFECGCVA 9
           C ECG VA
Sbjct: 201 CVECGVVA 208


>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39

Query: 1   WCFECGCV 8
           WC   GCV
Sbjct: 151 WCKTEGCV 158


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related

Query: 3   FECGCVA 9
           F CGC A
Sbjct: 355 FACGCGA 361


Query: 1    WCFECG 6
            WC  CG
Sbjct: 1671 WCNVCG 1676


>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  FECGCV 8
          F CGCV
Sbjct: 35 FTCGCV 40


>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 3  FECGCV 8
          F CGCV
Sbjct: 35 FTCGCV 40


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 3   FECGCVAC 10
           F  GC+ C
Sbjct: 157 FIIGCIPC 164


>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9

Query: 3   FECGCVAC 10
           F  GC+ C
Sbjct: 157 FIIGCIPC 164


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    WCFECGCVA 9
            +C   GCV+
Sbjct: 1677 YCLATGCVS 1685


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 2   CFECGCVA 9
           C+E  CVA
Sbjct: 98  CYELWCVA 105


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    CFECGCV 8
            C++ GC+
Sbjct: 4874 CYDGGCI 4880


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1681 YCLSVGCV 1688


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1675 YCLSVGCV 1682


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    CFECGCV 8
            C++ GC+
Sbjct: 4851 CYDGGCI 4857


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 1    WCFECGCVA 9
            +C   GCV+
Sbjct: 1677 YCLATGCVS 1685


>sp|DPOL_VARV|DNA polymerase|Variola virus

Query: 2   CFECG 6
           C+ CG
Sbjct: 139 CYHCG 143


>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   CFECG 6
           C+ CG
Sbjct: 139 CYHCG 143


>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 5  CGCV 8
          CGCV
Sbjct: 18 CGCV 21


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1674 YCLSVGCV 1681


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2   CFECGC 7
           CF  GC
Sbjct: 540 CFVSGC 545


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2   CFECGC 7
           CF  GC
Sbjct: 541 CFVSGC 546


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 5    CGCVAC 10
            CG V C
Sbjct: 1612 CGSVVC 1617


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1679 YCLSVGCV 1686


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1679 YCLSVGCV 1686


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    WCFECGCVA 9
            +C   GC++
Sbjct: 1677 YCLATGCIS 1685


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 1    WCFECGCVA 9
            +C   GC++
Sbjct: 1677 YCLATGCIS 1685


>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)

Query: 5  CGCV 8
          CGC+
Sbjct: 18 CGCI 21


>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)

Query: 5  CGCV 8
          CGC+
Sbjct: 18 CGCI 21


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1677 YCLSVGCV 1684


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1678 YCLSVGCV 1685


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1677 YCLATGCV 1684


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2    CFECGC 7
            C++ GC
Sbjct: 1520 CYDAGC 1525


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1673 YCLSTGCV 1680


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1678 YCLTVGCV 1685


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1673 YCLSTGCV 1680


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    WCFECGCV 8
            +C   GCV
Sbjct: 1673 YCLSTGCV 1680




66|SequenceR|335|326|EKMCLWCFEC

>sp|DNLI_VARV|DNA ligase|Variola virus

Query: 3   MCLWCFEC 10
           MCL+ F+C
Sbjct: 312 MCLFVFDC 319


>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3   MCLWCFEC 10
           MCL+ F+C
Sbjct: 312 MCLFVFDC 319


>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   MCLWCFEC 10
           MCL+ F+C
Sbjct: 312 MCLFVFDC 319


>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)

Query: 3   MCLWCFEC 10
           MCL+ F+C
Sbjct: 312 MCLFVFDC 319


>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)

Query: 3   MCLWCFEC 10
           MCL+ F+C
Sbjct: 314 MCLFVFDC 321


>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)

Query: 2  KMCLWCFEC 10
          K+C  CF C
Sbjct: 67 KLCPNCFNC 75


>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)

Query: 2  KMCLWCFEC 10
          K+C  CF C
Sbjct: 60 KLCPNCFNC 68


>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)

Query: 4  CLWC 7
          CLWC
Sbjct: 41 CLWC 44


>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967)

Query: 4  CLWC 7
          CLWC
Sbjct: 41 CLWC 44


>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4  CLWC 7
          CLWC
Sbjct: 41 CLWC 44


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 420 CLWAFK 425


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 418 CLWAFK 423


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 417 CLWAFK 422


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 419 CLWAFK 424


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 418 CLWAFK 423


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 419 CLWAFK 424


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 4   CLWCFE 9
           CLW F+
Sbjct: 419 CLWAFK 424


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 3    MCLWCF 8
            MC WC 
Sbjct: 2254 MCNWCL 2259


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1    EKMCLW 6
            EK+C W
Sbjct: 1089 EKLCAW 1094


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 5    LWCF 8
            LWCF
Sbjct: 1968 LWCF 1971


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 3    MCLWCF 8
            MC WC 
Sbjct: 2254 MCNWCL 2259


Query: 5    LWCFE 9
            LWC++
Sbjct: 6413 LWCYK 6417


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 4   CLWCF 8
           CLW F
Sbjct: 419 CLWAF 423


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 4   CLWCF 8
           CLW F
Sbjct: 419 CLWAF 423


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 4   CLWCF 8
           CLW F
Sbjct: 419 CLWAF 423


>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P

Query: 2   KMCLWC 7
           K C WC
Sbjct: 115 KECWWC 120


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 1   EKMCLWCFE 9
           E   LWCF+
Sbjct: 222 ESTFLWCFK 230


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 5    LWCF 8
            LWCF
Sbjct: 2180 LWCF 2183


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 5    LWCF 8
            LWCF
Sbjct: 2180 LWCF 2183


>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4

Query: 1   EKMCLWCFE 9
           EKM L C+E
Sbjct: 109 EKMDLRCYE 117


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1   EKMCLWC 7
           +K+CL+C
Sbjct: 236 KKLCLFC 242


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   EKMCLWC 7
           +K+CL+C
Sbjct: 236 KKLCLFC 242


>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   MCLWC 7
           +C+WC
Sbjct: 152 LCVWC 156


>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   MCLWC 7
           +C+WC
Sbjct: 152 LCVWC 156


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   KMCLW 6
           K CLW
Sbjct: 995 KTCLW 999


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   MCLWCFE 9
           +C WC E
Sbjct: 283 LCYWCSE 289


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   MCLWCFE 9
           +C WC E
Sbjct: 283 LCYWCSE 289


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   KMCLW 6
           K CLW
Sbjct: 995 KTCLW 999


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   KMCLW 6
           K CLW
Sbjct: 995 KTCLW 999


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   KMCLW 6
           K CLW
Sbjct: 995 KTCLW 999


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2   KMCLW 6
           K CLW
Sbjct: 995 KTCLW 999


>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 5    LWCF 8
            +WCF
Sbjct: 2178 IWCF 2181


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 5    LWCF 8
            +WCF
Sbjct: 2178 IWCF 2181


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   KMCLWCFE 9
           K C+ C+E
Sbjct: 187 KTCMKCYE 194


>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57

Query: 1   EKMCLWCF 8
           E  CL CF
Sbjct: 119 EANCLKCF 126


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 2   KMCLWCFE 9
           K C+ C+E
Sbjct: 187 KTCMKCYE 194


>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 5   LWCFEC 10
           LW F C
Sbjct: 517 LWLFMC 522


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 2   KMCLWC 7
           K CL+C
Sbjct: 722 KECLYC 727


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   KMCLWC 7
           K CL+C
Sbjct: 722 KECLYC 727


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 5    LWCF 8
            +WCF
Sbjct: 2179 VWCF 2182


>sp|TAT_HV193|PROTEIN Tat|Human immunodeficiency virus type 1

Query: 4  CLWCF 8
          C WCF
Sbjct: 34 CYWCF 38


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 5    LWCF 8
            +WCF
Sbjct: 2178 VWCF 2181


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 5    LWCFEC 10
            L+CF+C
Sbjct: 1620 LFCFKC 1625


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 5    LWCF 8
            +WCF
Sbjct: 2178 VWCF 2181


>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40

Query: 1   EKMCLWCF 8
           E  CL CF
Sbjct: 298 EANCLKCF 305


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 5    LWCF 8
            +WCF
Sbjct: 2178 VWCF 2181


>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)

Query: 2   KMCLWC 7
           +MC++C
Sbjct: 273 QMCIFC 278


>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant

Query: 2   KMCLWC 7
           +MC++C
Sbjct: 273 QMCIFC 278


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 5    LWCF 8
            +WCF
Sbjct: 2178 VWCF 2181


>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   KMCLWC 7
           +MC++C
Sbjct: 273 QMCIFC 278


>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a

Query: 1   EKMCLWCF 8
           E  CL CF
Sbjct: 293 ESNCLKCF 300


>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b

Query: 1   EKMCLWCF 8
           E  CL CF
Sbjct: 293 ESNCLKCF 300


>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   MCLWCF 8
           +CL+C+
Sbjct: 763 LCLFCY 768


>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45


>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])

Query: 6  WCFEC 10
          WC +C
Sbjct: 41 WCLDC 45




67|SequenceR|340|331|HLDSIEKMCL

>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 1   HLDSIEKMCL 10
           H+DS E +CL
Sbjct: 175 HIDSSEPLCL 184


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 1   HLDSIEKMCL 10
           H+DS E +CL
Sbjct: 175 HIDSSEPLCL 184


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 1    HLDSIEKMCL 10
            HL S+  MCL
Sbjct: 994  HLGSLRAMCL 1003


>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)

Query: 2   LDSIEKMCL 10
           LD+I K+CL
Sbjct: 441 LDTIAKICL 449


>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)

Query: 2   LDSIEKMCL 10
           LD+I K+CL
Sbjct: 438 LDTIAKLCL 446


>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain

Query: 2   LDSIEKMCL 10
           LD+I K+CL
Sbjct: 441 LDTIAKICL 449


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 1   HLDSIEKMCL 10
           H D  E +CL
Sbjct: 175 HFDKSEPLCL 184


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 2   LDSIEKMCL 10
           LD++ K CL
Sbjct: 457 LDTVAKQCL 465


>sp|VCP_VACCC|COMPLEMENT control protein C3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  DSIEKMCL 10
          D+IE +CL
Sbjct: 48 DTIEYLCL 55


>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14

Query: 2   LDSIEKM 8
           LDSIEK+
Sbjct: 138 LDSIEKL 144


>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19

Query: 1   HLDSIEKM 8
           +LDSIEK+
Sbjct: 129 YLDSIEKL 136


>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20

Query: 2   LDSIEKM 8
           LDSIEK+
Sbjct: 132 LDSIEKL 138


>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21

Query: 2   LDSIEKM 8
           LDSIEK+
Sbjct: 135 LDSIEKL 141


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4   SIEKMCL 10
           S+EK+C+
Sbjct: 768 SVEKICI 774


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4   SIEKMCL 10
           S+EK+C+
Sbjct: 768 SVEKICI 774


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4   SIEKMCL 10
           S+EK+C+
Sbjct: 768 SVEKICI 774


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4   SIEKMCL 10
           S+EK+C+
Sbjct: 768 SVEKICI 774


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4   SIEKMCL 10
           S+EK+C+
Sbjct: 768 SVEKICI 774


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4   SIEKMCL 10
           S+EK+C+
Sbjct: 768 SVEKICI 774


>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)

Query: 1   HLDSIEKMC 9
           H D I KMC
Sbjct: 213 HNDEIMKMC 221


>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)

Query: 1   HLDSIEKMCL 10
           +LD +EK+ L
Sbjct: 210 NLDDLEKLTL 219


>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25

Query: 1   HLDSIEKM 8
           +LD+IEK+
Sbjct: 124 YLDAIEKL 131


>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)

Query: 5  IEKMCL 10
          +EK+CL
Sbjct: 82 VEKLCL 87


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    LDSIEKMC 9
            L SIE++C
Sbjct: 3907 LTSIEEVC 3914


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    LDSIEKMC 9
            L SIE++C
Sbjct: 3907 LTSIEEVC 3914


>sp|VB20_VACCC|PROTEIN B20|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  HLDSIEKMC 9
          ++DSI+++C
Sbjct: 20 NVDSIKQLC 28


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 5   IEKMCL 10
           IEK+CL
Sbjct: 388 IEKICL 393


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 1   HLDSIEKM 8
           HL+ +EK+
Sbjct: 326 HLEQLEKI 333




68|SequenceR|345|336|SPSLYHLDSI

>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2   PSLYHLDSI 10
           PSLY  D+I
Sbjct: 162 PSLYEDDAI 170


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2   PSLYHLD 8
           PS++HL+
Sbjct: 262 PSVFHLN 268


>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43

Query: 2   PSLYHL 7
           PSL+HL
Sbjct: 440 PSLWHL 445


>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese

Query: 2   PSLYHLDSI 10
           PS+YH + +
Sbjct: 512 PSIYHQEEV 520


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1    SPSLYHL 7
            +P LYH+
Sbjct: 1429 TPQLYHI 1435


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1    SPSLYHL 7
            +P LYH+
Sbjct: 1429 TPQLYHI 1435


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1    SPSLYHL 7
            +P LYH+
Sbjct: 1429 TPQLYHI 1435


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 259 PSVFHL 264


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 260 PSVFHL 265


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 260 PSVFHL 265


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 262 PSVFHL 267


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate

Query: 1    SPSLYH 6
            SP+L+H
Sbjct: 1186 SPALFH 1191


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2   PSLYHLD 8
           P+L H+D
Sbjct: 490 PTLIHMD 496


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 262 PSVFHL 267


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 2   PSLYHL 7
           PS++HL
Sbjct: 261 PSVFHL 266




69|SequenceR|350|341|WFTCGSPSLY

>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   WFTCGSPSLY 10
           WFT  SP+L+
Sbjct: 197 WFTHASPTLF 206


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1   WFTCGSPSLY 10
           WFT  SP+L+
Sbjct: 197 WFTHASPTLF 206


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1   WFTCGSPSLY 10
           WFT  SP+L+
Sbjct: 197 WFTHASPTLF 206


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1   WFTCGSPSLY 10
           WFT  SP+L+
Sbjct: 197 WFTHASPTLF 206


>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 1   WFTCGSPSLY 10
           WFT  SP+L+
Sbjct: 197 WFTHASPTLF 206


>sp|VP30_MABVR|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ravn-87)

Query: 4   CGSPSL 9
           CGSPSL
Sbjct: 128 CGSPSL 133


>sp|VP30_MABVP|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Popp-67)

Query: 4   CGSPSL 9
           CGSPSL
Sbjct: 128 CGSPSL 133


>sp|VP30_MABVO|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 4   CGSPSL 9
           CGSPSL
Sbjct: 128 CGSPSL 133


>sp|VP30_MABVM|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Musoke-80)

Query: 4   CGSPSL 9
           CGSPSL
Sbjct: 128 CGSPSL 133


>sp|VP30_MABVA|TRANSCRIPTIONAL activator VP30|Lake Victoria marburgvirus (strain Angola/2005)

Query: 4   CGSPSL 9
           CGSPSL
Sbjct: 128 CGSPSL 133


>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New

Query: 1   WFTCGSPSL 9
           W  C SP+ 
Sbjct: 330 WMACHSPAF 338


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSADLY 1131


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1130 TCGSADLY 1137


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1129 TCGSADLY 1136


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1125 TCGSADLY 1132


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1125 TCGSADLY 1132


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1132 TCGSSDLY 1139


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1129 TCGSSDLY 1136


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1129 TCGSSDLY 1136


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1126 TCGSSDLY 1133


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 3    TCGSPSLY 10
            TCGS  LY
Sbjct: 1124 TCGSSDLY 1131


>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)

Query: 2   FTCGSPSL 9
           F CG P+L
Sbjct: 291 FGCGDPAL 298


>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)

Query: 2   FTCGSPSL 9
           F CG P+L
Sbjct: 300 FGCGDPAL 307


>sp|PHOSP_CHAV|PHOSPHOPROTEIN virus (strain I653514) (CHPV)

Query: 4  CGSPS 8
          CGSP+
Sbjct: 37 CGSPT 41


>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)

Query: 2  FTCGSPS 8
          F C SPS
Sbjct: 58 FLCPSPS 64


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1   WFTCGSPSL 9
           WF   SP+L
Sbjct: 639 WFLTASPAL 647


>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 751 WQTSSNPSIF 760


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 751 WQTSSNPSIF 760


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 754 WQTSSNPSIF 763


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 754 WQTSSNPSIF 763


>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)

Query: 2   FTCGSPSL 9
           + CG+P+L
Sbjct: 932 YQCGTPAL 939


>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)

Query: 3  TCGSP 7
          TCG P
Sbjct: 18 TCGQP 22


>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)

Query: 3  TCGSP 7
          TCG P
Sbjct: 18 TCGQP 22


>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)

Query: 3  TCGSP 7
          TCG P
Sbjct: 18 TCGQP 22


>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)

Query: 3  TCGSP 7
          TCG P
Sbjct: 18 TCGQP 22


>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   WFTCGSPSL 9
           WF  G+P +
Sbjct: 203 WFLLGAPMI 211


>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   WFTCGSPSL 9
           WF  G+P +
Sbjct: 203 WFLLGAPMI 211


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1   WFTCGSPSL 9
           WF   SP+L
Sbjct: 641 WFLTASPAL 649


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3    TCGSPSLY 10
            TCG+  LY
Sbjct: 1124 TCGASDLY 1131


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 3    TCGSPSLY 10
            TCG+  LY
Sbjct: 1122 TCGASDLY 1129


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 3    TCGSPSLY 10
            TCG+  LY
Sbjct: 1124 TCGASDLY 1131


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3    TCGSPSLY 10
            TCG+  LY
Sbjct: 1128 TCGASDLY 1135


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 753 WQTSSNPSVF 762


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 5   GSPSLY 10
           GSPSL+
Sbjct: 297 GSPSLF 302


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 753 WQTSSNPSVF 762


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 1   WFTCGSPSLY 10
           W T  +PSL+
Sbjct: 734 WQTSTNPSLF 743


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   WFTCGSPSL 9
           W + G+P+L
Sbjct: 837 WVSKGTPTL 845


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1   WFTCGSPS 8
           +  CG+PS
Sbjct: 787 YVPCGAPS 794


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   WFTCGSPSL 9
           W + G+P+L
Sbjct: 837 WVSKGTPTL 845


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    WFTCGS 6
            W +CG+
Sbjct: 2711 WVSCGT 2716


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 1   WFTCGSPSL 9
           W + G+P+L
Sbjct: 837 WVSKGTPTL 845


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    WFTCGS 6
            W +CG+
Sbjct: 2712 WVSCGT 2717


>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 5   GSPSLY 10
           GSPSL+
Sbjct: 297 GSPSLF 302


>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3

Query: 5   GSPSLY 10
           GSPSL+
Sbjct: 297 GSPSLF 302


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1    WFTCGS 6
            W +CG+
Sbjct: 2712 WVSCGT 2717


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1   WFTCGSPSLY 10
           W T  +PS++
Sbjct: 736 WQTATNPSIF 745


>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   WFTCGSP 7
           WF  GSP
Sbjct: 130 WFRYGSP 136


>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 3    TCGSPSLY 10
            TCG+  LY
Sbjct: 1128 TCGAVDLY 1135




70|SequenceR|355|346|WPKKGWFTCG

>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2   PKKGWFTC 9
           P+ GWF C
Sbjct: 546 PQGGWFGC 553


>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain

Query: 1   WPKKGWFTC 9
           W K+G F+C
Sbjct: 590 WRKRGTFSC 598


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 4    KGWFT 8
            KGWFT
Sbjct: 1522 KGWFT 1526


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2   PKKGWFTC 9
           P  GWF C
Sbjct: 546 PTGGWFGC 553


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2   PKKGWFTC 9
           P  GWF C
Sbjct: 545 PTGGWFGC 552


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 5   GWFTCG 10
           GW  CG
Sbjct: 823 GWMLCG 828


Query: 1   WPKKGWFT 8
           WP + W T
Sbjct: 231 WPIRYWAT 238


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 5   GWFTCG 10
           GW  CG
Sbjct: 823 GWMLCG 828


Query: 1   WPKKGWFT 8
           WP + W T
Sbjct: 231 WPIRYWAT 238


>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)

Query: 5   GWFTC 9
           GW++C
Sbjct: 249 GWYSC 253


>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)

Query: 5   GWFTC 9
           GW++C
Sbjct: 249 GWYSC 253


>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)

Query: 5   GWFTC 9
           GW++C
Sbjct: 249 GWYSC 253


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 5   GWFTCG 10
           GW  CG
Sbjct: 682 GWVLCG 687


>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)

Query: 1   WPKKGWF 7
           W K GW 
Sbjct: 492 WDKYGWL 498


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 1   WPKKGWF 7
           W K GW 
Sbjct: 492 WDKYGWL 498


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 5    GWFTCG 10
            GWFT G
Sbjct: 2969 GWFTAG 2974


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5    GWFTCG 10
            GWFT G
Sbjct: 2969 GWFTAG 2974


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 5    GWFTCG 10
            GWFT G
Sbjct: 2969 GWFTAG 2974


>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)

Query: 2   PKKGWFTCG 10
           PKK  +TC 
Sbjct: 210 PKKNVYTCA 218


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 2   PKKGWF 7
           P+K WF
Sbjct: 317 PRKYWF 322


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 2   PKKGWF 7
           P+K WF
Sbjct: 317 PRKYWF 322


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 2   PKKGWF 7
           P+K WF
Sbjct: 317 PRKYWF 322


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)

Query: 2   PKKGWF 7
           P+K WF
Sbjct: 317 PRKYWF 322


>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)

Query: 2   PKKGWFTCG 10
           PKK  +TC 
Sbjct: 210 PKKNVYTCA 218


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   WPKKGWFTCG 10
           W ++  FTC 
Sbjct: 264 WTERRQFTCA 273


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   WPKKGWFTCG 10
           W ++  FTC 
Sbjct: 264 WTERRQFTCA 273


>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1  WPKKGWF 7
          WP +G+F
Sbjct: 72 WPFRGFF 78


>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  WPKKGWF 7
          WP +G+F
Sbjct: 72 WPFRGFF 78


>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1  WPKKGWF 7
          WP +G+F
Sbjct: 72 WPFRGFF 78


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 5   GWFTC 9
           GW+ C
Sbjct: 249 GWYEC 253


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 2    PKKGWF 7
            PK+G+F
Sbjct: 1172 PKQGYF 1177


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 2    PKKGWF 7
            PK+G+F
Sbjct: 1172 PKQGYF 1177


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   PKKGW 6
           PKK W
Sbjct: 729 PKKNW 733


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  PKKGW 6
          P KGW
Sbjct: 69 PPKGW 73


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  PKKGW 6
          P KGW
Sbjct: 69 PPKGW 73


>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)

Query: 2    PKKGWF 7
            PK+G+F
Sbjct: 1176 PKQGYF 1181


>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United

Query: 5   GWFTC 9
           GW TC
Sbjct: 265 GWKTC 269


>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   PKKGWF 7
           P K WF
Sbjct: 206 PNKPWF 211


>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)

Query: 2   PKKGWF 7
           P K WF
Sbjct: 206 PNKPWF 211


>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)

Query: 2   PKKGWF 7
           P K WF
Sbjct: 206 PNKPWF 211


>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 5   GWFTC 9
           GWF C
Sbjct: 349 GWFHC 353


>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 5   GWFTC 9
           GWF C
Sbjct: 349 GWFHC 353


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 1   WPKKGWFTCG 10
           WP   W T G
Sbjct: 244 WPVGVWTTGG 253


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 3   KKGWF 7
           K GWF
Sbjct: 140 KSGWF 144


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 3   KKGWF 7
           K GWF
Sbjct: 140 KSGWF 144


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 3   KKGWF 7
           K GWF
Sbjct: 140 KSGWF 144


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2806 PYRTWHYCG 2814


Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2806 PYRTWHYCG 2814


Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2806 PYRTWHYCG 2814


Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2806 PYRTWHYCG 2814


Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2806 PYRTWHYCG 2814


Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2807 PYRTWHYCG 2815


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2807 PYRTWHYCG 2815


Query: 2    PKKGW 6
            P KGW
Sbjct: 3207 PSKGW 3211


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2806 PYRTWHYCG 2814


Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 2    PKKGWFTCG 10
            P + W  CG
Sbjct: 2807 PYRTWHYCG 2815


Query: 2    PKKGW 6
            P KGW
Sbjct: 3207 PSKGW 3211


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 3    KKGW 6
            KKGW
Sbjct: 1492 KKGW 1495


>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 2  PKKGWFT 8
          P+KGW +
Sbjct: 77 PEKGWLS 83


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 3    KKGW 6
            KKGW
Sbjct: 1493 KKGW 1496


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 3    KKGW 6
            KKGW
Sbjct: 1492 KKGW 1495


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3   KKGWFTCG 10
           K+G  TCG
Sbjct: 351 KEGATTCG 358


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3   KKGWFTCG 10
           K+G  TCG
Sbjct: 351 KEGATTCG 358


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 3    KKGW 6
            KKGW
Sbjct: 1495 KKGW 1498


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 3    KKGW 6
            KKGW
Sbjct: 1495 KKGW 1498


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 3    KKGW 6
            KKGW
Sbjct: 1493 KKGW 1496


>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3   KKGWFTCG 10
           KKG + CG
Sbjct: 410 KKGCWKCG 417


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 3    KKGW 6
            KKGW
Sbjct: 1483 KKGW 1486


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 3    KKGW 6
            KKGW
Sbjct: 1492 KKGW 1495


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 2    PKKGW 6
            P KGW
Sbjct: 3206 PSKGW 3210


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    PKKGW 6
            P KGW
Sbjct: 3184 PSKGW 3188


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    PKKGW 6
            P KGW
Sbjct: 3184 PSKGW 3188


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 3    KKGW 6
            KKGW
Sbjct: 1500 KKGW 1503


>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3   KKGWFTCG 10
           KKG + CG
Sbjct: 410 KKGCWKCG 417


>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3   KKGWFTCG 10
           KKG + CG
Sbjct: 410 KKGCWKCG 417


>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3   KKGWFTCG 10
           KKG + CG
Sbjct: 410 KKGCWKCG 417


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    PKKGW 6
            P KGW
Sbjct: 3184 PSKGW 3188


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    PKKGW 6
            P KGW
Sbjct: 3184 PSKGW 3188


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    PKKGW 6
            P KGW
Sbjct: 3184 PSKGW 3188




71|SequenceR|360|351|KKKRSWPKKG

>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P

Query: 4   RSWPKK 9
           RSWPKK
Sbjct: 152 RSWPKK 157


>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951

Query: 2   KKRSWPK 8
           K+RSWPK
Sbjct: 136 KERSWPK 142


>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954

Query: 2   KKRSWPK 8
           K+RSWPK
Sbjct: 136 KERSWPK 142


>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977

Query: 2   KKRSWPK 8
           K+RSWPK
Sbjct: 136 KERSWPK 142


>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979

Query: 2   KKRSWPK 8
           K+RSWPK
Sbjct: 136 KERSWPK 142


>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978

Query: 2   KKRSWPK 8
           K+RSWPK
Sbjct: 136 KERSWPK 142


>sp|HEMA_I82A2|HEMAGGLUTININ A virus (strain A/Camel/Mongolia/1982

Query: 2   KKRSWPK 8
           K+RSWPK
Sbjct: 116 KERSWPK 122


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   KKKRSWPKKG 10
           K+ + WPK+G
Sbjct: 241 KEPKPWPKEG 250


>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    KKRSWP 7
            KKRSWP
Sbjct: 1343 KKRSWP 1348


>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    KKRSWP 7
            KKRSWP
Sbjct: 1343 KKRSWP 1348


>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    KKRSWP 7
            KKRSWP
Sbjct: 1343 KKRSWP 1348


>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    KKRSWP 7
            KKRSWP
Sbjct: 1343 KKRSWP 1348


>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate

Query: 2    KKRSWP 7
            KKRSWP
Sbjct: 1343 KKRSWP 1348


>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain

Query: 2    KKRSWP 7
            KKRSWP
Sbjct: 1343 KKRSWP 1348


>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain

Query: 1    KKKRSWP 7
             KKRSWP
Sbjct: 1342 NKKRSWP 1348


>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940

Query: 2   KKRSWP 7
           K+RSWP
Sbjct: 136 KERSWP 141


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1299 KKRGWP 1304


>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P

Query: 3   KRSWP 7
           +RSWP
Sbjct: 248 RRSWP 252


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    KKRSWP 7
            K+RSWP
Sbjct: 1341 KRRSWP 1346


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    KKRSWP 7
            K+RSWP
Sbjct: 1341 KRRSWP 1346


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    KKRSWP 7
            K+RSWP
Sbjct: 1341 KRRSWP 1346


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    KKRSWP 7
            K+RSWP
Sbjct: 1341 KRRSWP 1346


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 2    KKRSWP 7
            K+RSWP
Sbjct: 1341 KRRSWP 1346


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2    KKRSWPKK 9
            K RS+PKK
Sbjct: 2027 KLRSYPKK 2034


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1370 KKRGWP 1375


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1371 KKRGWP 1376


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1371 KKRGWP 1376


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1371 KKRGWP 1376


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1371 KKRGWP 1376


>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954

Query: 2   KKRSWPK 8
           K+ SWPK
Sbjct: 136 KESSWPK 142


>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943

Query: 2   KKRSWPK 8
           K+ SWPK
Sbjct: 136 KESSWPK 142


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1367 KRSWP 1371


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2    KKRSWP 7
            KKR WP
Sbjct: 1370 KKRGWP 1375


>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945

Query: 2   KKRSWPK 8
           K+ SWPK
Sbjct: 136 KESSWPK 142


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1367 KRSWP 1371


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1371 KRSWP 1375


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1371 KRSWP 1375


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1343 KRSWP 1347


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1343 KRSWP 1347


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1343 KRSWP 1347


>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57

Query: 3   KRSWPKKG 10
           KR W KKG
Sbjct: 107 KRCWKKKG 114


>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980

Query: 2   KKRSWPK 8
           K+ SWPK
Sbjct: 136 KESSWPK 142


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 2   KKRSWPK 8
           K+ SWPK
Sbjct: 136 KESSWPK 142


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2    KKRSWPKK 9
            K RS+PKK
Sbjct: 2070 KLRSYPKK 2077


>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983

Query: 2   KKRSWPK 8
           K+ SWPK
Sbjct: 136 KESSWPK 142


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1   KKKRSWPKK 9
           KKK  W +K
Sbjct: 136 KKKADWAQK 144


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   KKKRSWPKK 9
           KKK  W +K
Sbjct: 136 KKKADWAQK 144


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1   KKKRSWPKK 9
           KKK  W +K
Sbjct: 136 KKKADWAQK 144


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1   KKKRSWPKK 9
           KKK  W +K
Sbjct: 136 KKKADWAQK 144


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1   KKKRSWPKK 9
           K+K +W KK
Sbjct: 140 KQKANWAKK 148


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1   KKKRSWPKK 9
           KKK  W +K
Sbjct: 136 KKKADWAQK 144


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1   KKKRSWPKK 9
           KKK  W +K
Sbjct: 136 KKKADWAQK 144


>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)

Query: 3    KRSWP 7
            KRSWP
Sbjct: 1371 KRSWP 1375


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 1   KKKRSWPK 8
           KK+ S+PK
Sbjct: 170 KKENSYPK 177


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2    KKRSWP 7
            +KR WP
Sbjct: 1368 RKRGWP 1373


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    KKRSWP 7
            +KR WP
Sbjct: 1372 RKRGWP 1377


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    KKRSWP 7
            +KR WP
Sbjct: 1372 RKRGWP 1377


>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 441 KTQTWPPK 448


>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)

Query: 1    KKKRSWP 7
            + +RSWP
Sbjct: 1359 RARRSWP 1365


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 2   KKRSWPKK 9
           K ++WP K
Sbjct: 440 KTQTWPPK 447


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 3    KRSWP 7
            KR+WP
Sbjct: 1339 KRTWP 1343


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1   KKKRSWPK 8
           KK+ S+PK
Sbjct: 170 KKENSYPK 177


>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a

Query: 3   KRSWPKKG 10
           K+ W KKG
Sbjct: 107 KKCWKKKG 114


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    KRSWP 7
            +RSWP
Sbjct: 1343 RRSWP 1347


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 2    KKRSWPKK 9
            K RS+PK+
Sbjct: 2070 KLRSYPKQ 2077


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 2    KKRSWPKK 9
            K RS+PK+
Sbjct: 2071 KLRSYPKQ 2078


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   KKKRSWPK 8
           KK+ S+PK
Sbjct: 170 KKESSYPK 177


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 2    KKRSWPKK 9
            K RS+PK+
Sbjct: 2070 KLRSYPKQ 2077


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 2    KKRSWPKK 9
            K RS+PK+
Sbjct: 2031 KLRSYPKQ 2038


>sp|GO_HCMVM|ENVELOPE glycoprotein O|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  KRSWP 7
          +RSWP
Sbjct: 41 RRSWP 45


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2    KKRSWPKK 9
            K RS+PK+
Sbjct: 2072 KLRSYPKR 2079


>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27

Query: 3   KRSWPKKG 10
           K+ W KKG
Sbjct: 107 KKCWKKKG 114


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 2    KKRSWPKK 9
            K RS+PK+
Sbjct: 2031 KLRSYPKQ 2038


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2   KKRSWPK 8
           KK++W K
Sbjct: 294 KKKNWKK 300


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 3    KRSWP 7
            +RSWP
Sbjct: 1343 RRSWP 1347


>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain

Query: 3   KRSWPKKG 10
           K SW KKG
Sbjct: 668 KLSWFKKG 675




72|SequenceR|365|356|LQWLIKKKRS

>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 1   LQWLIKKKRS 10
           L WL+KK+ S
Sbjct: 165 LLWLVKKENS 174


>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New

Query: 1   LQWLIKKKRS 10
           L WL+KK+ S
Sbjct: 165 LIWLVKKENS 174


>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961

Query: 1   LQWLIKKKRS 10
           L WL+KK+ S
Sbjct: 165 LIWLVKKESS 174


>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate

Query: 2   QWLIKKKRS 10
           +WLI+ K+S
Sbjct: 665 RWLIRAKKS 673


>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)

Query: 1   LQWLIKKKR 9
           +++L+KKKR
Sbjct: 318 VRYLVKKKR 326


>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   LQWLIKKKR 9
           +++L+KKKR
Sbjct: 318 VRYLVKKKR 326


>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKKKRS 10
           WLIKK  S
Sbjct: 157 WLIKKNSS 164


>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 1   LQWLIKKKRS 10
           L WL+KK  S
Sbjct: 165 LIWLVKKGNS 174


>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   QWLIKKKR 9
           +WLI+K R
Sbjct: 380 KWLIRKDR 387


>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967

Query: 1   LQWLIKKKRS 10
           L WL+KK  S
Sbjct: 165 LIWLVKKGSS 174


>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   QWLIKKKR 9
           +WLI+K R
Sbjct: 380 KWLIRKDR 387


>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)

Query: 1    LQWLIKK 7
            ++WL+KK
Sbjct: 1157 VEWLLKK 1163


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1    LQWLIKK 7
            ++WL+KK
Sbjct: 1156 VEWLLKK 1162


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 1    LQWLIKK 7
            ++WL+KK
Sbjct: 1157 VEWLLKK 1163


>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNNA 172


>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNST 172


>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 161 WLIKKNSA 168


>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNNA 172


>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 154 WLIKKNNA 161


>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 154 WLIKKNST 161


>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNSA 172


>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNSA 172


>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959

Query: 3   WLIKK 7
           WLIKK
Sbjct: 165 WLIKK 169


>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 154 WLIKKNSA 161


>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 154 WLIKKNSA 161


>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky

Query: 3   WLIKK 7
           WLIKK
Sbjct: 165 WLIKK 169


>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNSA 172


>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935

Query: 1   LQWLIKKKRS 10
           L WL KK+ S
Sbjct: 165 LLWLTKKEDS 174


>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKKKRS 10
           WLIKK  +
Sbjct: 165 WLIKKNSA 172


>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKK 7
           WLIKK
Sbjct: 165 WLIKK 169


>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea

Query: 3   WLIKK 7
           WLIKK
Sbjct: 163 WLIKK 167


>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003

Query: 3   WLIKK 7
           WLIKK
Sbjct: 165 WLIKK 169


>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong

Query: 3   WLIKK 7
           WLIKK
Sbjct: 165 WLIKK 169


>sp|PG097_VARV|PROTEIN OPG097|Variola virus

Query: 1   LQWLIKKKRS 10
            +WLIK   S
Sbjct: 247 FEWLIKNHLS 256


>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1   LQWLIKKKRS 10
            +WLIK   S
Sbjct: 247 FEWLIKNHLS 256


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 4    LIKKKRS 10
            LIK+KRS
Sbjct: 1325 LIKEKRS 1331




73|SequenceR|370|361|GVLTGLQWLI

>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 2    VLTGLQW 8
            VLTG QW
Sbjct: 1036 VLTGCQW 1042


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2    VLTGLQW 8
            VLTG QW
Sbjct: 1036 VLTGCQW 1042


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 1  GVLTGLQWL 9
          G+L  +QWL
Sbjct: 34 GMLNDMQWL 42


>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69

Query: 4   TGLQW 8
           TGLQW
Sbjct: 180 TGLQW 184


>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26

Query: 4   TGLQWLI 10
           TG+QW +
Sbjct: 180 TGVQWAV 186


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 1   GVLTGLQWL 9
           GV+  L+W+
Sbjct: 465 GVINTLEWI 473


>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)

Query: 1   GVLTGLQWL 9
           GV+  L+W+
Sbjct: 465 GVINTLEWI 473


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1   GVLTGLQWL 9
           GV+  L+W+
Sbjct: 465 GVINTLEWI 473


>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)

Query: 1   GVLTGLQWL 9
           GV+  L+W+
Sbjct: 465 GVINTLEWI 473


>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1   GVLTGLQWL 9
           GV+  L+W+
Sbjct: 465 GVINTLEWI 473


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1   GVLTGLQWL 9
           GV+  L+W+
Sbjct: 465 GVVNTLEWM 473


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   LTGLQWL 9
           +TG  WL
Sbjct: 900 MTGFTWL 906


>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   LTGLQW 8
           +TG QW
Sbjct: 103 VTGTQW 108


>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   LTGLQW 8
           +TG QW
Sbjct: 103 VTGTQW 108


>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   GVLTGLQW 8
           G +TG+ W
Sbjct: 402 GEITGVNW 409




74|SequenceR|375|366|IGVPAGVLTG

>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    IGVPAGVLTG 10
            +GV  G+LTG
Sbjct: 2100 LGVTKGILTG 2109


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    IGVPAGVLTG 10
            +GV  G+LTG
Sbjct: 2100 LGVTKGILTG 2109


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 4   PAGVLT 9
           PAGVLT
Sbjct: 468 PAGVLT 473


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 3  VPAGVLTG 10
          +PAG +TG
Sbjct: 53 IPAGSVTG 60


>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas)

Query: 1  IGVPAGVLT 9
          I  P GVLT
Sbjct: 21 ISTPPGVLT 29


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 878 AGVLTG 883


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 5   AGVLTG 10
           AGVLTG
Sbjct: 884 AGVLTG 889


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2    GVPAGV 7
            GVP+GV
Sbjct: 1896 GVPSGV 1901


>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus

Query: 3   VPAGVLTG 10
           +PA V TG
Sbjct: 180 IPAEVFTG 187


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    IGVPAGVLT 9
            +GVP G+++
Sbjct: 1023 LGVPDGLIS 1031


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate

Query: 3  VPAGVLTG 10
          +PAG+L G
Sbjct: 33 LPAGLLLG 40


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 3  VPAGVLTG 10
          +PAG+L G
Sbjct: 33 LPAGLLLG 40


>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38

Query: 3   VPAGVLT 9
           VP GVLT
Sbjct: 410 VPEGVLT 416


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 3  VPAGVLTG 10
          +PAG+L G
Sbjct: 33 LPAGLLLG 40




75|SequenceR|380|371|GAILAIGVPA

>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    GAILAIGV 8
            GAILAI V
Sbjct: 3074 GAILAIVV 3081


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    GAILAIGV 8
            GAILAI V
Sbjct: 3094 GAILAIVV 3101


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1    GAILAIGV 8
            GAILAI V
Sbjct: 3124 GAILAIVV 3131


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    GAILAIGV 8
            GAILAI V
Sbjct: 3074 GAILAIVV 3081


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    GAILAIGV 8
            GAILAI V
Sbjct: 3094 GAILAIVV 3101


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1    GAILAIGV 8
            GAILAI V
Sbjct: 3124 GAILAIVV 3131


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1    GAILAIGV 8
            GAI+ IG+
Sbjct: 1835 GAIVEIGI 1842




76|SequenceR|385|376|APIAIGAILA

>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 1    APIAIGAIL 9
             PIA+G IL
Sbjct: 1384 GPIAVGGIL 1392


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1    APIAIGAIL 9
             PIA+G +L
Sbjct: 1384 GPIAVGGLL 1392


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 1   APIAIGAILA 10
           AP+AIG + A
Sbjct: 159 APLAIGPLWA 168




77|SequenceR|390|381|IGIIMAPIAI

>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1   IGIIMAPI 8
           +GI M P+
Sbjct: 133 VGITMVPV 140


>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus

Query: 2   GIIMAPIAI 10
           G+IMA +AI
Sbjct: 112 GVIMAGVAI 120


>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 2   GIIMAPIAI 10
           G++MA IAI
Sbjct: 112 GVVMAGIAI 120


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   IGIIMAPIAI 10
           IGI++  IAI
Sbjct: 683 IGIVVLRIAI 692




78|SequenceR|395|386|GVYVPIGIIM

>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGII 9
           GVYV IGII
Sbjct: 672 GVYVIIGII 680


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 2    VYVPIGIIM 10
            VY PIGII+
Sbjct: 2054 VYNPIGIIL 2062


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2    VYVPIGIIM 10
            VY P+GII+
Sbjct: 2054 VYSPVGIIL 2062


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 2    VYVPIGIIM 10
            VY PIGI++
Sbjct: 2054 VYNPIGIVL 2062


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGIIM 10
           GVY+ +GII+
Sbjct: 674 GVYIVVGIIV 683


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGIIM 10
           GVY+ +GII+
Sbjct: 674 GVYIVVGIIV 683


>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGIIM 10
           GVY+ +GII+
Sbjct: 681 GVYIVVGIIV 690


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGII 9
           GVY+ +GII
Sbjct: 670 GVYIVVGII 678


>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  VYVPIGI 8
          VY+P+G+
Sbjct: 55 VYIPVGV 61


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 2    VYVPIGIIM 10
            VY P+GI++
Sbjct: 2054 VYNPVGILL 2062


>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGIIM 10
           G+Y+ IGI++
Sbjct: 678 GLYIVIGIVV 687


>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   YVPIGIIM 10
           Y P+G+ M
Sbjct: 406 YFPVGLFM 413


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   YVPIGIIM 10
           Y P+G+ M
Sbjct: 406 YFPVGLFM 413


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3   YVPIGIIM 10
           Y P+G+ M
Sbjct: 406 YFPVGLFM 413


>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain

Query: 2   VYVPIGI 8
           +Y+P GI
Sbjct: 326 IYIPTGI 332


>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain

Query: 2   VYVPIGI 8
           +Y+P GI
Sbjct: 326 IYIPTGI 332


>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain

Query: 2   VYVPIGI 8
           +Y+P GI
Sbjct: 326 IYIPTGI 332


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1674 MYVPVGAV 1681


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1674 MYVPVGAV 1681


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1675 MYVPVGAV 1682


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1675 MYVPVGAV 1682


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1677 MYVPVGAV 1684


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1677 MYVPVGAV 1684


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1682 MYVPVGAV 1689


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2    VYVPIGII 9
            +YVP+G +
Sbjct: 1674 MYVPVGAV 1681


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGII 9
           GV++ +GII
Sbjct: 679 GVHIVVGII 687


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2   VYVPIGII 9
           +Y+P GI+
Sbjct: 691 IYIPRGIL 698


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   VYVPIGII 9
           +Y+P GI+
Sbjct: 706 IYIPRGIL 713


>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain

Query: 3    YVPIGIIM 10
            ++P+GII+
Sbjct: 1199 FLPMGIII 1206


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    VYVPIGII 9
            +Y P GII
Sbjct: 1972 IYTPEGII 1979


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    VYVPIGII 9
            +Y P GII
Sbjct: 1972 IYTPEGII 1979


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    VYVPIGII 9
            +Y P GII
Sbjct: 1972 IYTPEGII 1979


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    VYVPIGII 9
            +Y P GII
Sbjct: 1972 IYTPEGII 1979


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 2    VYVPIGII 9
            +Y P GII
Sbjct: 1972 IYTPEGII 1979


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   VYVPIGII 9
           +Y P+GI+
Sbjct: 272 MYSPVGIL 279


>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   VYVPIGII 9
           +Y P+GI+
Sbjct: 272 MYSPVGIL 279


>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   GVYVPIGIIM 10
           G +VP G+++
Sbjct: 285 GPFVPSGLVL 294


>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26

Query: 3   YVPIG 7
           YVP+G
Sbjct: 228 YVPVG 232


>sp|REX_HTLV2|PROTEIN Rex|Human T-cell leukemia virus 2

Query: 2  VYVPIGI 8
          VY PIG+
Sbjct: 43 VYRPIGV 49


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1661 MYIPVG 1666


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1660 MYIPVG 1665


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1662 MYIPVG 1667


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1660 MYIPVG 1665


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1670 MYIPVG 1675


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1658 MYIPVG 1663


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1663 MYIPVG 1668


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1651 MYIPVG 1656


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1651 MYIPVG 1656


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1650 MYIPVG 1655


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1650 MYIPVG 1655


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1654 MYIPVG 1659


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1649 MYIPVG 1654


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1668 MYIPVG 1673


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1652 MYIPVG 1657


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1666 MYIPVG 1671


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1652 MYIPVG 1657


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2    VYVPIG 7
            +Y+P+G
Sbjct: 1652 MYIPVG 1657


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   GVYVPIGIIM 10
           G+YV  G+I+
Sbjct: 683 GLYVVAGLIV 692




79|SequenceR|400|391|NHIKRGVYVP

>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)

Query: 1   NHIKRGVYV 9
           + IKRGVY+
Sbjct: 739 DRIKRGVYM 747


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1  NHIKRGVYVP 10
          N   RGVY P
Sbjct: 30 NSFTRGVYYP 39


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 3   IKRGVYVP 10
           I RGVY P
Sbjct: 545 INRGVYKP 552


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3   IKRGVYVP 10
           I RGVY P
Sbjct: 545 INRGVYKP 552


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   RGVYVP 10
           RG+YVP
Sbjct: 215 RGLYVP 220


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   RGVYVP 10
           RG+YVP
Sbjct: 215 RGLYVP 220


>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40

Query: 2   HIKRGVYVP 10
           H+K G ++P
Sbjct: 166 HLKAGAHIP 174


>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41

Query: 2   HIKRGVYVP 10
           H+K G ++P
Sbjct: 168 HLKAGAHIP 176


>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)

Query: 1   NHIKRGVYVP 10
           +HI R +++P
Sbjct: 911 SHISRALFLP 920


>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)

Query: 1   NHIKRGVYVP 10
           +HI R +++P
Sbjct: 911 SHISRALFLP 920


>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)

Query: 1   NHIKRGVYVP 10
           +HI R +++P
Sbjct: 911 SHISRALFLP 920


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 1   NHIKRGVYVP 10
           +HI R +++P
Sbjct: 916 SHISRALFLP 925


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 1   NHIKRGVYVP 10
           +HI R +++P
Sbjct: 916 SHISRALFLP 925


>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)

Query: 1   NHIKRGVYVP 10
           +HI R +++P
Sbjct: 911 SHISRALFLP 920


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPAHYVP 1936


>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5

Query: 4   KRGVYVP 10
           +RGV++P
Sbjct: 400 RRGVFLP 406


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1933 NHVSPAHYVP 1942


>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2

Query: 4   KRGVYVP 10
           +RGV++P
Sbjct: 399 RRGVFLP 405


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 5  RGVYVP 10
          RGVY P
Sbjct: 38 RGVYYP 43


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    HIKRGVY 8
            H++RG Y
Sbjct: 1070 HLRRGSY 1076


>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H

Query: 5   RGVYVP 10
           RG+Y+P
Sbjct: 137 RGLYLP 142


>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   RGVYVP 10
           RG+Y+P
Sbjct: 126 RGLYLP 131


>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D

Query: 5   RGVYVP 10
           RG+Y+P
Sbjct: 126 RGLYLP 131


>sp|SCP_HHV6Z|SMALL capsomere-interacting protein|Human herpesvirus 6B (strain Z29)

Query: 1  NHIKRGVYVP 10
          NH   GV++P
Sbjct: 45 NHPVLGVFLP 54


>sp|SCP_HHV6H|SMALL capsomere-interacting protein|Human herpesvirus 6B (HHV-6 variant

Query: 1  NHIKRGVYVP 10
          NH   GV++P
Sbjct: 45 NHPVLGVFLP 54


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1933 NHVSPTHYVP 1942


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1932 NHVSPTHYVP 1941


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 388 NHKNRGTY 395


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1   NHIKRGVY 8
           NH  RG Y
Sbjct: 380 NHKNRGTY 387


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1932 NHVSPTHYVP 1941


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1928 NHVSPTHYVP 1937


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1931 NHVSPTHYVP 1940


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1928 NHVSPTHYVP 1937


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1935 NHVSPTHYVP 1944


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3  IKRGVY 8
          +KRG+Y
Sbjct: 65 LKRGIY 70


>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)

Query: 3  IKRGVY 8
          +KRG+Y
Sbjct: 60 LKRGIY 65


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1925 NHVSPTHYVP 1934


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1929 NHVSPTHYVP 1938


>sp|HBSAG_HBVA3|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 5   RGVYVP 10
           RG+Y+P
Sbjct: 137 RGLYLP 142


>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 5   RGVYVP 10
           RG+Y+P
Sbjct: 126 RGLYLP 131


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   KRGVYV 9
           KRGV+V
Sbjct: 504 KRGVFV 509


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   KRGVYV 9
           KRGV+V
Sbjct: 504 KRGVFV 509


>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   KRGVYV 9
           KRGV+V
Sbjct: 502 KRGVFV 507


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   KRGVYV 9
           KRGV+V
Sbjct: 501 KRGVFV 506


>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   KRGVYV 9
           KRGV+V
Sbjct: 500 KRGVFV 505


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   KRGVYV 9
           KRGV+V
Sbjct: 509 KRGVFV 514


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1927 NHVSPTHYVP 1936


>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2

Query: 5   RGVYVP 10
           RG+Y+P
Sbjct: 137 RGLYLP 142


>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)

Query: 2   HIKRGVYVP 10
           H K G ++P
Sbjct: 259 HTKHGSFMP 267


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1931 NHVSPTHYVP 1940


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   IKRGVYVP 10
           + +G+Y P
Sbjct: 403 VXKGIYAP 410


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1   NHIKRGVYVP 10
           NH K   +VP
Sbjct: 434 NHTKLVTFVP 443


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 1    NHIKRGVYVP 10
            NH+    YVP
Sbjct: 1932 NHVAPTHYVP 1941


>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)

Query: 1   NHIKRGVYVP 10
           NH +  VY P
Sbjct: 327 NHYELTVYAP 336


>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14

Query: 1   NHIKRG 6
           NH K+G
Sbjct: 108 NHFKKG 113


>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24

Query: 1   NHIKRG 6
           NH K+G
Sbjct: 108 NHFKKG 113


>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47

Query: 1   NHIKRG 6
           NH K+G
Sbjct: 108 NHFKKG 113


>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8

Query: 1   NHIKRG 6
           NH K+G
Sbjct: 108 NHFKKG 113


>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20

Query: 1   NHIKRG 6
           NH K+G
Sbjct: 108 NHFKKG 113




80|SequenceR|405|396|KGEYRNHIKR

>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 2   GEYRNHIK 9
           GE+R+H++
Sbjct: 314 GEFRDHVQ 321


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    KGEYRNH 7
            KG+YR+H
Sbjct: 1497 KGKYRSH 1503


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    KGEYRNH 7
            KG+YR+H
Sbjct: 1497 KGKYRSH 1503


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    KGEYRNH 7
            KG+YR+H
Sbjct: 1497 KGKYRSH 1503


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    KGEYRNH 7
            KG+YR+H
Sbjct: 1497 KGKYRSH 1503


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    KGEYRNH 7
            KG+YR+H
Sbjct: 1497 KGKYRSH 1503


>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)

Query: 3   EYRNHIKR 10
           +YRN+IK+
Sbjct: 179 KYRNYIKK 186


>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)

Query: 6   NHIKR 10
           NHIKR
Sbjct: 157 NHIKR 161


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1   KGEYRNHI 8
           KGE  NH+
Sbjct: 963 KGELSNHM 970


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 4   YRNHI 8
           YRNHI
Sbjct: 782 YRNHI 786


>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 4   YRNHIK 9
           +RNH+K
Sbjct: 135 FRNHVK 140


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 3   EYRNH 7
           EY+NH
Sbjct: 641 EYKNH 645


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra

Query: 1   KGEYRNHI 8
           KGE  NH+
Sbjct: 960 KGELSNHM 967


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 4   YRNHI 8
           YRNHI
Sbjct: 782 YRNHI 786


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 4   YRNHI 8
           YRNHI
Sbjct: 782 YRNHI 786


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 4   YRNHI 8
           YRNHI
Sbjct: 782 YRNHI 786


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 4   YRNHI 8
           YRNHI
Sbjct: 782 YRNHI 786


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 4   YRNHI 8
           YRNHI
Sbjct: 782 YRNHI 786


>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3    EYRNH 7
            +YRNH
Sbjct: 1237 KYRNH 1241


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3    EYRNH 7
            +YRNH
Sbjct: 1237 KYRNH 1241


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 4  YRNHIK 9
          Y NH+K
Sbjct: 54 YDNHVK 59


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 4  YRNHIK 9
          Y NH+K
Sbjct: 54 YDNHVK 59


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 4  YRNHIK 9
          Y NH+K
Sbjct: 54 YDNHVK 59


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4  YRNHIK 9
          Y NH+K
Sbjct: 54 YDNHVK 59


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4  YRNHIK 9
          Y NH+K
Sbjct: 54 YDNHVK 59


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4  YRNHIK 9
          Y NH+K
Sbjct: 54 YDNHVK 59


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 3   EYRNHIK 9
           EY  H+K
Sbjct: 803 EYEEHVK 809


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 6   NHIKR 10
           NH+KR
Sbjct: 468 NHVKR 472




81|SequenceR|410|401|HKSVDKGEYR

>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   HKSVDKGEY 9
           HK  D+G Y
Sbjct: 479 HKRADQGHY 487


>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   HKSVDKGEY 9
           HK  D+G Y
Sbjct: 479 HKRADQGHY 487


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   HKSVDKGEY 9
           HK  D+G Y
Sbjct: 478 HKRADQGHY 486


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   HKSVDKGEY 9
           HK  D+G Y
Sbjct: 479 HKRADQGHY 487


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1   HKSVDKGEY 9
           HK  D+G Y
Sbjct: 477 HKRADQGHY 485


>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)

Query: 4  VDKGEY 9
          +DKG+Y
Sbjct: 27 IDKGQY 32


>sp|IL1BP_MONPV|INTERLEUKIN-1-BINDING protein|Monkeypox virus (MPXV)

Query: 4  VDKGEY 9
          +DKG+Y
Sbjct: 27 IDKGQY 32


>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)

Query: 4  VDKGEY 9
          +DKG+Y
Sbjct: 27 IDKGQY 32


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 4    VDKGEY 9
            VDKG Y
Sbjct: 1859 VDKGHY 1864


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4    VDKGEY 9
            VDKG Y
Sbjct: 1859 VDKGHY 1864


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    VDKGEYR 10
            ++KG+YR
Sbjct: 1495 IEKGKYR 1501


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    VDKGEYR 10
            ++KG+YR
Sbjct: 1495 IEKGKYR 1501


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    VDKGEYR 10
            ++KG+YR
Sbjct: 1495 IEKGKYR 1501


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    VDKGEYR 10
            ++KG+YR
Sbjct: 1495 IEKGKYR 1501


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 4    VDKGEYR 10
            ++KG+YR
Sbjct: 1495 IEKGKYR 1501


>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   KSVDKGE 8
           +S+DKGE
Sbjct: 172 ESMDKGE 178


>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   KSVDKGE 8
           +S+DKGE
Sbjct: 172 ESMDKGE 178


>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain

Query: 2   KSVDKGE 8
           +S+DKGE
Sbjct: 172 ESMDKGE 178




82|SequenceR|415|406|ALNRKHKSVD

>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   NRKHKSVD 10
           NRK +SVD
Sbjct: 568 NRKRRSVD 575


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1   ALNRKHKSV 9
           +++RKHKS+
Sbjct: 545 SIDRKHKSL 553


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 1   ALNRKHKSV 9
           +++RKHKS+
Sbjct: 544 SIDRKHKSL 552


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 2   LNRKHKSV 9
           ++RKHKS+
Sbjct: 542 IDRKHKSL 549


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 1   ALNRKHKSV 9
           +L+RKHK +
Sbjct: 527 SLDRKHKQL 535


>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])

Query: 1   ALNRKHKSVD 10
           ALNRK++ +D
Sbjct: 472 ALNRKNELID 481


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 1   ALNRKHKSV 9
           +L+RKHK +
Sbjct: 528 SLDRKHKQL 536


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 540 SIDRKHKTL 548


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 540 SIDRKHKTL 548


>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 540 SIDRKHKTL 548


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 2   LNRKHKSV 9
           L+RKHK++
Sbjct: 548 LDRKHKNL 555


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 1   ALNRKHKSV 9
           +++RKH+S+
Sbjct: 532 SIDRKHRSL 540


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 539 SIDRKHKAL 547


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 547 SIDRKHKAL 555


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 2   LNRKHKSV 9
           ++RKH+S+
Sbjct: 558 IDRKHRSL 565


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 547 SIDRKHKAL 555


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 1   ALNRKHKSV 9
           +++RKHK++
Sbjct: 540 SIDRKHKAL 548


>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69

Query: 2   LNRKHKSV 9
           ++RKH+S+
Sbjct: 533 IDRKHRSL 540


>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39

Query: 1   ALNRKHKSV 9
           +L+RK+KS+
Sbjct: 543 SLDRKYKSL 551


>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26

Query: 2   LNRKHKSV 9
           ++RKH+S+
Sbjct: 537 IDRKHRSL 544


>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18

Query: 1   ALNRKHK 7
           +++RKHK
Sbjct: 553 SIDRKHK 559


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 2   LNRKHK 7
           L+RKHK
Sbjct: 545 LDRKHK 550


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1   ALNRKHK 7
           +++RKHK
Sbjct: 546 SIDRKHK 552


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1    ALNRKHKSVD 10
            A+NR+H   +
Sbjct: 1750 AVNREHSGTE 1759


>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45

Query: 1   ALNRKHK 7
           +++RKHK
Sbjct: 539 SIDRKHK 545




83|SequenceR|420|411|VGGAIALNRK

>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 1   VGGAIA 6
           VGGA+A
Sbjct: 388 VGGAVA 393


>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1   VGGAIA 6
           VGGA+A
Sbjct: 733 VGGAVA 738


>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   VGGAIA 6
           VGGA+A
Sbjct: 733 VGGAVA 738


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   VGGAIA 6
           VGGA+A
Sbjct: 732 VGGAVA 737




84|SequenceR|425|416|IVSLTVGGAI

>sp|B4_HHV6Z|PROTEIN B4|Human herpesvirus 6B (strain Z29)

Query: 3   SLTVGGA 9
           SLT+GGA
Sbjct: 138 SLTLGGA 144


>sp|SPIKE_ADE08|FIBER protein|Human adenovirus D serotype 8

Query: 2  VSLTVGGAI 10
          VSL VGG +
Sbjct: 61 VSLKVGGGL 69


>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9

Query: 2  VSLTVGGAI 10
          VSL VGG +
Sbjct: 61 VSLKVGGGL 69


>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9

Query: 2  VSLTVGGAI 10
          VSL VGG +
Sbjct: 61 VSLKVGGGL 69


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 1    IVSLTVGGAI 10
            + ++T GGAI
Sbjct: 1283 VRTITTGGAI 1292


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    IVSLTVGGAI 10
            + ++T GGAI
Sbjct: 1284 VRTITTGGAI 1293


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 1    IVSLTVGGAI 10
            + ++T GGAI
Sbjct: 1286 VRTVTTGGAI 1295


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 3   SLTVGGAI 10
           + TVGGA+
Sbjct: 385 TTTVGGAV 392




85|SequenceR|430|421|VVPSVIVSLT

 ***** No hits found ******


86|SequenceR|435|426|VTVAAVVPSV

 ***** No hits found ******


87|SequenceR|440|431|PVGIGVTVAA

>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41

Query: 1   PVGIGVT 7
           P+GIGVT
Sbjct: 132 PLGIGVT 138


>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human

Query: 1   PVGIGVT 7
           P+GIG+T
Sbjct: 116 PLGIGIT 122


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 1   PVGIGVT 7
           P GIGVT
Sbjct: 653 PAGIGVT 659


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1   PVGIGVT 7
           P GIGVT
Sbjct: 653 PAGIGVT 659


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 1   PVGIGVT 7
           P GIGVT
Sbjct: 653 PAGIGVT 659


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1   PVGIGVT 7
           P GIGVT
Sbjct: 653 PAGIGVT 659


>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus

Query: 1   PVGIGV 6
           P+GIGV
Sbjct: 499 PIGIGV 504


>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate

Query: 1   PVGIGV 6
           P+GIGV
Sbjct: 499 PIGIGV 504


>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   PVGIGV 6
           P+GIGV
Sbjct: 499 PIGIGV 504


>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 1   PVGIGV 6
           P+GIGV
Sbjct: 499 PIGIGV 504


>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)

Query: 1   PVGIGV 6
           P+GIGV
Sbjct: 499 PIGIGV 504


>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 1   PVGIGVT 7
           P GIG+T
Sbjct: 653 PAGIGIT 659


>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65

Query: 1   PVGIGVT 7
           P+GIG T
Sbjct: 114 PLGIGTT 120


>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4

Query: 1   PVGIGVT 7
           P+GIG T
Sbjct: 114 PLGIGTT 120


>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 112 PLGVGVS 118


>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 139 PLGVGVS 145


>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 110 PLGVGVS 116


>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 119 PLGVGVS 125


>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 127 PLGVGVS 133


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 221 PLGVGVS 227


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 4   IGVTVAA 10
           IGVTVAA
Sbjct: 708 IGVTVAA 714


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1   PVGIGVTV 8
           PV +G TV
Sbjct: 402 PVSVGTTV 409


>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 110 PLGVGVS 116


>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49

Query: 1   PVGIGVT 7
           P+G+G T
Sbjct: 115 PLGVGTT 121


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 1   PVGIGVT 7
           P+G+G T
Sbjct: 113 PLGVGTT 119


>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37

Query: 1   PVGIGVT 7
           P+G+G T
Sbjct: 113 PLGVGTT 119


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 1   PVGIGVT 7
           P+G+G T
Sbjct: 113 PLGVGTT 119


>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17

Query: 1   PVGIGVT 7
           P+G+G T
Sbjct: 113 PLGVGTT 119


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 109 PLGVGVS 115


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 109 PLGVGVS 115


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 1   PVGIGVT 7
           P+G+GV+
Sbjct: 109 PLGVGVS 115


>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 142 PLGVGIS 148


>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 112 PLGVGIS 118


>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 128 PLGVGIS 134


>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 141 PLGVGIS 147


>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 111 PLGVGIS 117


>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 112 PLGVGIS 118


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 112 PLGVGIS 118


>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 113 PLGVGIS 119


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 109 PLGVGIS 115


>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 110 PLGVGIS 116


>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3   GIGVTV 8
           GIGVT+
Sbjct: 874 GIGVTI 879


>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3   GIGVTV 8
           GIGVT+
Sbjct: 874 GIGVTI 879


>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 113 PLGVGIS 119


>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 138 PLGVGIS 144


>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 109 PLGVGIS 115


>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 112 PLGVGIS 118


>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)

Query: 1  PVGIGVTVAA 10
          P G   TVAA
Sbjct: 83 PAGDNATVAA 92


>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)

Query: 1  PVGIGVTVAA 10
          P G   TVAA
Sbjct: 83 PAGDNATVAA 92


>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)

Query: 1  PVGIGVTVAA 10
          P G   TVAA
Sbjct: 82 PAGDNATVAA 91


>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55

Query: 1   PVGIGVT 7
           P+G+G++
Sbjct: 109 PLGVGIS 115




88|SequenceR|445|436|YALMIPVGIG

>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 1   YALMIPVG 8
           YA  IPVG
Sbjct: 384 YAFSIPVG 391


>sp|VE7_HPV63|PROTEIN E7|Human papillomavirus type 63

Query: 1  YALMIPVGI 9
          YA+++P G+
Sbjct: 39 YAIVLPCGL 47


>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   YALMIP 6
           +ALMIP
Sbjct: 163 FALMIP 168


>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   YALMIP 6
           +ALMIP
Sbjct: 163 FALMIP 168


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    YALMIP 6
            YA MIP
Sbjct: 2391 YAFMIP 2396


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    YALMIP 6
            YA MIP
Sbjct: 2388 YAFMIP 2393


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 4    MIPVGIG 10
            +IP GIG
Sbjct: 1487 IIPAGIG 1493


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3   LMIPVGIG 10
           +MIP G G
Sbjct: 637 IMIPKGTG 644


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 5   IPVGIG 10
           IP GIG
Sbjct: 652 IPAGIG 657


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 5   IPVGIG 10
           IP GIG
Sbjct: 652 IPAGIG 657


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 5   IPVGIG 10
           IP GIG
Sbjct: 652 IPAGIG 657


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 5   IPVGIG 10
           IP GIG
Sbjct: 652 IPAGIG 657


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 1   YALMIPVGIG 10
           ++ ++PVG+ 
Sbjct: 833 FSFVVPVGLA 842


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 514 IPMGVG 519


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 517 IPMGVG 522


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 517 IPMGVG 522


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 514 IPMGVG 519


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 510 IPMGVG 515


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 514 IPMGVG 519


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 510 IPMGVG 515


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 510 IPMGVG 515


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 514 IPMGVG 519


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 517 IPMGVG 522


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 517 IPMGVG 522


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 514 IPMGVG 519


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 514 IPMGVG 519


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 517 IPMGVG 522


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 504 IPMGVG 509


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 517 IPMGVG 522


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1   YALMIPVGIG 10
           Y   IP+G G
Sbjct: 660 YECDIPIGAG 669


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1   YALMIPVGIG 10
           Y   IP+G G
Sbjct: 646 YECDIPIGAG 655


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 5   IPVGIG 10
           IP+G+G
Sbjct: 515 IPMGVG 520




89|SequenceR|450|441|VVGYVYALMI

>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    VVGYVYALMI 10
            V+GY YAL +
Sbjct: 1507 VIGYKYALTV 1516


>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 2  VGYVYA 7
          +GYVYA
Sbjct: 15 LGYVYA 20


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2  VGYVYA 7
          +GYVYA
Sbjct: 15 LGYVYA 20


>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)

Query: 2  VGYVYA 7
          +GYVYA
Sbjct: 18 LGYVYA 23


>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)

Query: 2  VGYVYA 7
          +GYVYA
Sbjct: 18 LGYVYA 23


>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)

Query: 2  VGYVYA 7
          +GYVYA
Sbjct: 18 LGYVYA 23


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 1    VVGYVYA 7
            V+GY YA
Sbjct: 1506 VIGYKYA 1512


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1    VVGYVYA 7
            V+GY YA
Sbjct: 1507 VIGYKYA 1513


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1    VVGYVYA 7
            V+GY YA
Sbjct: 1506 VIGYKYA 1512


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1    VVGYVYA 7
            V+GY YA
Sbjct: 1506 VIGYKYA 1512


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 1    VVGYVYA 7
            V+GY YA
Sbjct: 1507 VIGYKYA 1513


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 3   GYVYALMI 10
           GY+Y L++
Sbjct: 889 GYLYVLVV 896


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 2   VGYVYALM 9
           +G+VYA++
Sbjct: 509 LGHVYAML 516


>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12

Query: 2  VGYVYALM 9
          +G+VY +M
Sbjct: 38 IGWVYGIM 45




90|SequenceR|455|446|CLSIPVVGYV

>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1   CLSIPVVGY 9
           CL+ PV+ Y
Sbjct: 313 CLASPVLNY 321


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1   CLSIPVVGY 9
           C   PVVGY
Sbjct: 877 CKDHPVVGY 885


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1   CLSIPVVGY 9
           C   PVVGY
Sbjct: 877 CKEHPVVGY 885


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1   CLSIPVVGY 9
           C   PVVGY
Sbjct: 877 CKEHPVVGY 885


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1   CLSIPVVGY 9
           C   PVVGY
Sbjct: 877 CKDHPVVGY 885


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1   CLSIPVVGY 9
           C   PVVGY
Sbjct: 877 CKEHPVVGY 885


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1   CLSIPVVGY 9
           C   PVVGY
Sbjct: 877 CKEHPVVGY 885


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P

Query: 1   CLSIPVV 7
           C+SIPV+
Sbjct: 268 CVSIPVI 274


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 1   CLSIPVVGY 9
           CL+IP   Y
Sbjct: 184 CLTIPASAY 192


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 4   IPVVGY 9
           IP+VGY
Sbjct: 504 IPLVGY 509


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 4   IPVVGY 9
           IP+VGY
Sbjct: 501 IPLVGY 506


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 1    CLSIPVVGYV 10
            CLS P++  +
Sbjct: 1922 CLSKPIINAI 1931


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 1    CLSIPVVGYV 10
            CLS P++  +
Sbjct: 1922 CLSKPIINAI 1931


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 1   CLSIPV 6
           C+S+PV
Sbjct: 184 CMSVPV 189


>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2   LSIPVVGY 9
           L +PVV Y
Sbjct: 820 LRVPVVNY 827


>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain

Query: 2   LSIPVVGY 9
           L +PVV Y
Sbjct: 820 LRVPVVNY 827


>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)

Query: 1   CLSIPVVGY 9
           C   P++GY
Sbjct: 302 CTISPIMGY 310


>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)

Query: 1   CLSIPVVGY 9
           C   P++GY
Sbjct: 302 CTISPIMGY 310


>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   CLSIPVVGY 9
           CLS+  +GY
Sbjct: 128 CLSLSGMGY 136


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 1   CLSIPV 6
           C+S+PV
Sbjct: 654 CVSVPV 659




91|SequenceR|460|451|CGGSRCLSIP

>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2  GGSRCLSIP 10
           G RCL++P
Sbjct: 44 AGHRCLTVP 52


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2  GGSRCLSIP 10
           G RCL++P
Sbjct: 44 AGHRCLTVP 52


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2  GGSRCLSIP 10
           G RCL++P
Sbjct: 44 AGHRCLTVP 52


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 5    RCLSIP 10
            RCLS+P
Sbjct: 2169 RCLSLP 2174


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 2    GGSRCLSI 9
            GG RC+ I
Sbjct: 3510 GGDRCIKI 3517


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    GGSRCLSI 9
            GG RC+ I
Sbjct: 3510 GGDRCIKI 3517


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1   CGGSRCLSIP 10
           CG ++C S P
Sbjct: 861 CGATQCTSKP 870


Query: 1   CGGSRCLS 8
           CG SRC S
Sbjct: 344 CGHSRCDS 351


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   CGGSRCLSIP 10
           CG ++C S P
Sbjct: 864 CGATQCTSKP 873


Query: 1   CGGSRCLS 8
           CG SRC S
Sbjct: 346 CGHSRCDS 353


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   CGGSRCLSIP 10
           CG ++C S P
Sbjct: 862 CGATQCTSKP 871


Query: 1   CGGSRCLS 8
           CG SRC S
Sbjct: 345 CGHSRCDS 352


>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 2   GGSRCLSIP 10
           GGS   SIP
Sbjct: 381 GGSYAFSIP 389


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 2    GGSRCLSIP 10
            GG++ L IP
Sbjct: 2202 GGAKLLGIP 2210


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2  GGSRCLS 8
           GS+CLS
Sbjct: 25 AGSQCLS 31


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1   CGGSRCLSI 9
           CG S C S+
Sbjct: 878 CGASECRSM 886


>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)

Query: 1   CGGSRCLSI 9
           CG S+C  I
Sbjct: 220 CGLSKCTYI 228


>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn

Query: 2   GGSRCLSIP 10
           GG RC   P
Sbjct: 465 GGCRCGKYP 473


>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   CGGSRCLSI 9
           CG S+C  I
Sbjct: 220 CGLSKCTYI 228


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1   CGGSRCLSI 9
           CG S C S+
Sbjct: 878 CGTSECRSM 886


>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P

Query: 1  CGGSRCLSI 9
          C  S CLSI
Sbjct: 90 CLNSLCLSI 98


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   CGGSRCLS 8
           CG ++C S
Sbjct: 864 CGATQCTS 871




92|SequenceR|465|456|GASVGCGGSR

>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   ASVGCGGSR 10
           A++GC G R
Sbjct: 198 ATLGCTGGR 206


>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   ASVGCGGSR 10
           A++GC G R
Sbjct: 198 ATLGCTGGR 206


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1    GASVGCGGSR 10
             ++V CGG R
Sbjct: 2392 ASTVVCGGKR 2401


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1    GASVGCGGSR 10
             ++V CGG R
Sbjct: 2392 ASTVVCGGKR 2401


>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   GCGGS 9
           GCGG+
Sbjct: 295 GCGGA 299


>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   GCGGS 9
           GCGG+
Sbjct: 295 GCGGA 299


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 5   GCGGSR 10
           GCGG R
Sbjct: 121 GCGGPR 126


>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P

Query: 4   VGCGG 8
           +GCGG
Sbjct: 291 MGCGG 295


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 5   GCGGSR 10
           GCGG R
Sbjct: 121 GCGGPR 126


>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)

Query: 1   GASVGCGGSR 10
           G+S+G  GS+
Sbjct: 478 GSSMGIDGSK 487


>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1   GASVGCGGSR 10
           G+S+G  GS+
Sbjct: 478 GSSMGIDGSK 487


>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)

Query: 1   GASVGCGGSR 10
           G+S+G  GS+
Sbjct: 478 GSSMGIDGSK 487


>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann

Query: 1   GASVGCGGSR 10
           G+S+G  GS+
Sbjct: 478 GSSMGIDGSK 487


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 5   GCGGSR 10
           GCGG R
Sbjct: 121 GCGGPR 126


>sp|IR09_HCMVA|UNCHARACTERIZED protein IRL9|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  SVGCGGSR 10
            GCGG R
Sbjct: 52 PTGCGGER 59


>sp|BEL3_FOAMV|PROTEIN Bel-3|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 5  GCGG 8
          GCGG
Sbjct: 75 GCGG 78




93|SequenceR|470|461|VGKGNGASVG

>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   GKGNGASV 9
           GKGN  SV
Sbjct: 800 GKGNAGSV 807


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   GKGNGASV 9
           GKGN  SV
Sbjct: 800 GKGNAGSV 807


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 4   GNGASVG 10
           GNG +VG
Sbjct: 161 GNGGAVG 167


>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3

Query: 2  GKGNGAS 8
          G GNG+S
Sbjct: 4  GSGNGSS 10


>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1   VGKGNGASV 9
           VGK NG  V
Sbjct: 348 VGKNNGGVV 356


>sp|PHOSP_MUMP1|PHOSPHOPROTEIN virus (strain SBL-1) (MuV)

Query: 4   GNGASVG 10
           GNGAS G
Sbjct: 172 GNGASAG 178


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 2   GKGNGASVG 10
           G GN  SVG
Sbjct: 275 GSGNRTSVG 283


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 2   GKGNGASVG 10
           G GN  SVG
Sbjct: 275 GSGNRTSVG 283


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 1  VGKGNGASV 9
          +G GNG +V
Sbjct: 26 LGAGNGEAV 34


>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)

Query: 4   GNGASVG 10
           GNGAS G
Sbjct: 173 GNGASAG 179


>sp|PG144_VARV|VIRION membrane protein OPG144 precursor|Variola virus

Query: 4   GNGASVG 10
           GNG +VG
Sbjct: 110 GNGNTVG 116


>sp|PG144_VAR67|VIRION membrane protein OPG144 precursor|Variola virus (isolate

Query: 4   GNGASVG 10
           GNG +VG
Sbjct: 110 GNGNTVG 116


>sp|PG144_VACCC|VIRION membrane protein OPG144 precursor|Vaccinia virus (strain

Query: 4   GNGASVG 10
           GNG +VG
Sbjct: 110 GNGNTVG 116


>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)

Query: 4   GNGASVG 10
           GNG +VG
Sbjct: 111 GNGNTVG 117


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 2   GKGNGASV 9
           G GNG+ V
Sbjct: 326 GMGNGSEV 333


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 2   GKGNGASV 9
           G GNG+ V
Sbjct: 325 GMGNGSEV 332


>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28

Query: 2   GKGNGASV 9
           G+GNG  V
Sbjct: 278 GQGNGRDV 285


>sp|PHOSP_MUMPE|PHOSPHOPROTEIN virus (strain Enders) (MuV)

Query: 4   GNGASVG 10
           GNGAS G
Sbjct: 173 GNGASAG 179


>sp|PHOSP_MUMPZ|PHOSPHOPROTEIN virus genotype N (strain

Query: 4   GNGASVG 10
           GNGAS G
Sbjct: 173 GNGASAG 179


>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 1   VGKGNGASV 9
           V KG G+S+
Sbjct: 217 VTKGGGSSI 225


>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)

Query: 1   VGKGNGASV 9
           V KG G+S+
Sbjct: 217 VTKGGGSSI 225


>sp|PHOSP_MUMPJ|PHOSPHOPROTEIN virus genotype A (strain

Query: 4   GNGASVG 10
           GNGAS G
Sbjct: 173 GNGASAG 179




94|SequenceR|475|466|DFEIRVGKGN

>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3   EIRVGKGN 10
           EIR+GK +
Sbjct: 505 EIRIGKAS 512


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2    FEIRVG 7
            FE+RVG
Sbjct: 1213 FELRVG 1218


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2    FEIRVG 7
            FE+RVG
Sbjct: 1213 FELRVG 1218


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2    FEIRVG 7
            FE+RVG
Sbjct: 1213 FELRVG 1218


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2    FEIRVG 7
            FE+RVG
Sbjct: 1213 FELRVG 1218


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2    FEIRVG 7
            FE+RVG
Sbjct: 1213 FELRVG 1218


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2    FEIRVG 7
            FE+RVG
Sbjct: 1213 FELRVG 1218


>sp|GP42_EBVG|GLYCOPROTEIN 42|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5   RVGKGN 10
           RVG+GN
Sbjct: 168 RVGEGN 173


>sp|GP42_EBVB9|GLYCOPROTEIN 42|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5   RVGKGN 10
           RVG+GN
Sbjct: 168 RVGEGN 173


>sp|GP42_EBVA8|GLYCOPROTEIN 42|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   RVGKGN 10
           RVG+GN
Sbjct: 168 RVGEGN 173


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2   FEIRVGKGN 10
           F+I+V  GN
Sbjct: 398 FQIKVTAGN 406


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2   FEIRVGKGN 10
           F+I+V  GN
Sbjct: 398 FQIKVTAGN 406


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 5   RVGKGN 10
           R GKGN
Sbjct: 798 RAGKGN 803


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   RVGKGN 10
           R GKGN
Sbjct: 798 RAGKGN 803


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1    DFEIRVGK 8
            D+E+ +GK
Sbjct: 2165 DYEVVIGK 2172


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 274 FKIRTGKSS 282


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 274 FKIRTGKSS 282


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 274 FKIRTGKSS 282


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 274 FKIRTGKSS 282


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 273 FKIRAGKSS 281


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 274 FKIRTGKSS 282


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 274 FKIRTGKSS 282


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 258 FKIRTGKSS 266


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 2   FEIRVGKGN 10
           F+IR GK +
Sbjct: 258 FKIRTGKSS 266




95|SequenceR|480|471|IDNEDDFEIR

>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   IDNEDDFEI 9
           +DN+DD E+
Sbjct: 423 VDNDDDKEM 431


>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 1  IDNEDDFE 8
          IDNE D+E
Sbjct: 16 IDNELDYE 23


>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain

Query: 1  IDNEDDFE 8
          IDNE D+E
Sbjct: 16 IDNELDYE 23


>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)

Query: 1   IDNEDDFEI 9
           +DN+DD E+
Sbjct: 423 VDNDDDKEM 431


>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate

Query: 1  IDNEDDFE 8
          IDNE D+E
Sbjct: 16 IDNELDYE 23


>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)

Query: 1  IDNEDDFE 8
          IDNE D+E
Sbjct: 16 IDNELDYE 23


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 1    IDNEDDF 7
            IDN+D+F
Sbjct: 1302 IDNKDEF 1308


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 1    IDNEDDF 7
            IDN+D+F
Sbjct: 1302 IDNKDEF 1308


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 1    IDNEDDF 7
            IDN+D+F
Sbjct: 1302 IDNKDEF 1308


>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)

Query: 2   DNEDDFE 8
           D+EDD E
Sbjct: 700 DSEDDIE 706


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 5   DDFEIR 10
           DDF++R
Sbjct: 690 DDFDVR 695


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 5   DDFEIR 10
           DDF++R
Sbjct: 687 DDFDVR 692


>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)

Query: 2   DNEDDFEI 9
           D  DDFE+
Sbjct: 648 DPSDDFEL 655


>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)

Query: 2   DNEDDFEI 9
           D  DDFE+
Sbjct: 648 DPSDDFEL 655


>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)

Query: 3  NEDDFE 8
          +EDDFE
Sbjct: 84 SEDDFE 89


>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3  NEDDFE 8
          +EDDFE
Sbjct: 84 SEDDFE 89


>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)

Query: 1   IDNEDDFEIR 10
           ++  D FE+R
Sbjct: 510 VERSDSFEMR 519


>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus

Query: 2  DNEDDFEIR 10
          D+E DF +R
Sbjct: 14 DDESDFFLR 22


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 1   IDNEDDFE 8
           I  EDD+E
Sbjct: 331 IAGEDDYE 338


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 1   IDNEDDFE 8
           I  EDD+E
Sbjct: 331 IAGEDDYE 338


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 1   IDNEDDFE 8
           I  EDD+E
Sbjct: 331 IAGEDDYE 338


>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)

Query: 2    DNEDDF 7
            +NEDD+
Sbjct: 1599 NNEDDY 1604


>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1   IDNEDDFEIR 10
           I+N+  FE+R
Sbjct: 108 IENDCIFEVR 117




96|SequenceR|485|476|TGGVNIDNED

>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 1    TGGVNIDNE 9
            +G VN+D+E
Sbjct: 1570 SGAVNLDDE 1578


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 1    TGGVNIDNE 9
            +G VN+D+E
Sbjct: 1567 SGAVNLDDE 1575


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1   TGGVNIDNED 10
           T G+NI N D
Sbjct: 195 TIGLNIQNPD 204


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   TGGVNIDNED 10
           T G+NI N D
Sbjct: 195 TIGLNIQNPD 204


>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  GGVNIDN 8
          GG+N+D+
Sbjct: 43 GGLNLDD 49


>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2  GGVNIDN 8
          GG+N+D+
Sbjct: 43 GGLNLDD 49


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 2   GGVNIDNED 10
            G N  NED
Sbjct: 651 AGANASNED 659


>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P

Query: 2   GGVNIDN 8
           GGV ID+
Sbjct: 385 GGVKIDS 391




97|SequenceR|490|481|DVATNTGGVN

>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)

Query: 4   TNTGGV 9
           TNTGGV
Sbjct: 147 TNTGGV 152


>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1  DVATNTGGV 9
          DVA  TG V
Sbjct: 39 DVACGTGAV 47


>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  DVATNTGGV 9
          DVA  TG V
Sbjct: 39 DVACGTGAV 47


>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  DVATNTGGV 9
          DVA  TG V
Sbjct: 39 DVARGTGAV 47


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 1   DVATNTGGVN 10
           D   N GG+N
Sbjct: 965 DFVLNPGGLN 974


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 1   DVATNTGGVN 10
           D   N GG+N
Sbjct: 965 DFVLNPGGLN 974


>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate

Query: 2    VATNTGGV 9
            V+TNTG +
Sbjct: 1111 VSTNTGNL 1118


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 2    VATNTGGV 9
            V+TNTG +
Sbjct: 1107 VSTNTGNL 1114


>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51

Query: 3   ATNTGG 8
           +TNTGG
Sbjct: 269 STNTGG 274


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2    VATNTGGV 9
            VATNT  V
Sbjct: 2043 VATNTSNV 2050




98|SequenceR|495|486|AVSTTDVATN

>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1  AVSTTDVATN 10
          A+S+++ ATN
Sbjct: 41 AISSSNTATN 50




99|SequenceR|500|491|NHRAEAVSTT

>sp|VP7_ROTHV|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   NHRAEAVSTT 10
           NH+ +  STT
Sbjct: 234 NHKLDITSTT 243


>sp|GJ_HHV11|ENVELOPE glycoprotein J|Human herpesvirus 1 (strain 17)

Query: 2  HRAEAVSTT 10
          HR  A +TT
Sbjct: 24 HRGPAANTT 32


>sp|VP7_ROTHQ|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 1   NHRAEAVSTT 10
           NH+ +  +TT
Sbjct: 234 NHKLDVTTTT 243


>sp|VP7_ROTWI|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United

Query: 1   NHRAEAVSTT 10
           NH+ +  +TT
Sbjct: 234 NHKLDVTTTT 243




100|SequenceR|505|496|EGISPNHRAE

>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   ISPNHRAE 10
           + P+HRAE
Sbjct: 183 VHPDHRAE 190


>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   ISPNHRAE 10
           + P+HRAE
Sbjct: 182 VHPDHRAE 189


>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   ISPNHRAE 10
           + P+HRAE
Sbjct: 183 VHPDHRAE 190


>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain

Query: 1   EGISPN 6
           EGI+PN
Sbjct: 223 EGINPN 228


>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain

Query: 1   EGISPNH 7
           +G+SPN+
Sbjct: 174 QGLSPNY 180


>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate

Query: 1   EGISPNH 7
           +G+SPN+
Sbjct: 174 QGLSPNY 180


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 3   ISPNHRAE 10
           ISP H+++
Sbjct: 102 ISPQHKSK 109


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 3   ISPNHRAE 10
           ISP H+++
Sbjct: 102 ISPQHKSK 109


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 3   ISPNHRAE 10
           ISP H+++
Sbjct: 100 ISPQHKSK 107


>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


Query: 3   ISPNH 7
           ISPNH
Sbjct: 804 ISPNH 808


>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


Query: 3   ISPNH 7
           ISPNH
Sbjct: 804 ISPNH 808


>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)

Query: 3   ISPNHR 8
           I PNH+
Sbjct: 445 IKPNHK 450


>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   ISPNHR 8
           I PNH+
Sbjct: 445 IKPNHK 450


>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)

Query: 3   ISPNHRAE 10
           ++P+H AE
Sbjct: 420 VAPDHEAE 427


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 3   ISPNHRAE 10
           ISP H+++
Sbjct: 104 ISPGHKSK 111


>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H

Query: 1  EGISPNHRA 9
          E  +PNH A
Sbjct: 75 EHCTPNHTA 83


>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 1  EGISPNHRA 9
          E  +PNH A
Sbjct: 75 EHCTPNHTA 83


>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2

Query: 1  EGISPNHRA 9
          E  +PNH A
Sbjct: 75 EHCTPNHTA 83


>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H

Query: 1  EGISPNHRA 9
          E  +PNH A
Sbjct: 46 EHCTPNHTA 54


>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2

Query: 1  EGISPNHRA 9
          E  +PNH A
Sbjct: 46 EHCTPNHTA 54


>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2

Query: 1  EGISPNHRA 9
          E  +PNH A
Sbjct: 46 EHCTPNHTA 54


>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 3   ISPNH 7
           ISPNH
Sbjct: 804 ISPNH 808


>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1

Query: 2   GISPNHR 8
           G  PNHR
Sbjct: 137 GAPPNHR 143


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 3   ISPNH 7
           ISPNH
Sbjct: 802 ISPNH 806


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1    EGISPNHR 8
            EG+ PN R
Sbjct: 1500 EGVLPNPR 1507




101|SequenceR|510|501|GGVSGEGISP

>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 1    GGVSGEGI 8
            GGV G+G+
Sbjct: 3025 GGVEGQGL 3032


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 1    GGVSGEGI 8
            GGV G GI
Sbjct: 3036 GGVEGAGI 3043


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1  GGVSGEGISP 10
          G V+G  I P
Sbjct: 56 GSVTGSSIGP 65


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    GGVSGEGI 8
            GGV G+G+
Sbjct: 3031 GGVEGKGL 3038


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    GGVSGEGI 8
            GGV G+G+
Sbjct: 3027 GGVEGKGL 3034


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 2   GVSGEGI 8
           GVSG G+
Sbjct: 610 GVSGRGV 616


>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1

Query: 5   GEGISP 10
           GEGI+P
Sbjct: 461 GEGITP 466


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 2   GVSGEGIS 9
           GVS EGI+
Sbjct: 861 GVSVEGIA 868


>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate

Query: 2    GVSGEGISP 10
            GVS EG+ P
Sbjct: 1952 GVSPEGLLP 1960


>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United

Query: 2    GVSGEGISP 10
            GVS EG+ P
Sbjct: 1952 GVSPEGLLP 1960


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 4    SGEGIS 9
            SGEG+S
Sbjct: 1745 SGEGLS 1750


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 1    GGVSGEG 7
            GG++ EG
Sbjct: 3844 GGITSEG 3850


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 1    GGVSGEG 7
            GG++ EG
Sbjct: 3844 GGITSEG 3850


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1    GGVSGEG 7
            GGV G+G
Sbjct: 3819 GGVLGDG 3825


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1    GGVSGEG 7
            GGV G+G
Sbjct: 3819 GGVLGDG 3825


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 3   VSGEGIS 9
           V GEG+S
Sbjct: 120 VGGEGLS 126


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    GGVSGEGI 8
            GGV G G+
Sbjct: 3005 GGVEGTGL 3012


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 3   VSGEGIS 9
           V GEG+S
Sbjct: 120 VGGEGLS 126




102|SequenceR|515|506|LSGTLGGVSG

>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 895 LDPSLGGVSG 904


>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 894 LDPSLGGVSG 903


>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)

Query: 1   LSGTLGGVSG 10
           L  +LGGVSG
Sbjct: 895 LDPSLGGVSG 904


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1   LSGTLGGVSG 10
           L+GT+ GVSG
Sbjct: 271 LAGTVSGVSG 280


>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)

Query: 1   LSGTLGGVSG 10
           L  +LGG+SG
Sbjct: 894 LDPSLGGISG 903


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 2    SGTLGGVS 9
            SGT+GG S
Sbjct: 1697 SGTVGGFS 1704


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   LSGTLGGVSG 10
           L  ++GGVSG
Sbjct: 880 LDPSIGGVSG 889


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   LSGTLGGVSG 10
           L  ++GGVSG
Sbjct: 880 LDPSIGGVSG 889


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   LSGTLGGVSG 10
           L  ++GGVSG
Sbjct: 880 LDPSIGGVSG 889


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   LSGTLGGVSG 10
           L  ++GGVSG
Sbjct: 880 LDPSIGGVSG 889


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1   LSGTLGGVSG 10
           L  ++GGVSG
Sbjct: 880 LDPSIGGVSG 889


>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1

Query: 1  LSGTLGGVS 9
          LSG+LG VS
Sbjct: 30 LSGSLGAVS 38


>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 1   LSGTLGGVSG 10
           LSG  GGV G
Sbjct: 225 LSGEDGGVFG 234


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 1   LSGTLGGVSG 10
           LSG  GGV G
Sbjct: 225 LSGEDGGVFG 234


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 1   LSGTLGGVSG 10
           LSG  GGV G
Sbjct: 225 LSGEDGGVFG 234


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 1   LSGTLGGVSG 10
           LSG  GGV G
Sbjct: 225 LSGEDGGVFG 234


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 1   LSGTLGGVSG 10
           LSG  GGV G
Sbjct: 225 LSGEDGGVFG 234


>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2

Query: 2   SGTLGGVSG 10
           +G  GGV+G
Sbjct: 324 TGIAGGVTG 332


>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 2   SGTLGGVSG 10
           +G  GGV+G
Sbjct: 331 TGIAGGVTG 339


>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3

Query: 2   SGTLGGVSG 10
           +G  GGV+G
Sbjct: 329 TGIAGGVTG 337


>sp|UL04_HCMVT|EARLY glycoprotein GP48|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 2  SGTLGG 7
          SGT+GG
Sbjct: 51 SGTVGG 56


>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E

Query: 1  LSGTLGGVS 9
          +SG+LGG+S
Sbjct: 30 VSGSLGGLS 38


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 5   LGGVSG 10
           LGG+SG
Sbjct: 98  LGGLSG 103


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 5   LGGVSG 10
           LGG+SG
Sbjct: 98  LGGLSG 103


>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)

Query: 5   LGGVSG 10
           LGG+SG
Sbjct: 101 LGGLSG 106


>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)

Query: 5   LGGVSG 10
           LGG+SG
Sbjct: 101 LGGLSG 106


>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48

Query: 5   LGGVSG 10
           +GGVSG
Sbjct: 148 VGGVSG 153




103|SequenceR|520|511|SGSASLSGTL

 ***** No hits found ******


104|SequenceR|525|516|IRDMHSGSAS

>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)

Query: 1   IRDMHSGSAS 10
           ++DMH+GS S
Sbjct: 103 LKDMHTGSMS 112


>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain

Query: 1   IRDMHSGSAS 10
           ++DMH+GS S
Sbjct: 103 LKDMHTGSMS 112


>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   IRDMHSG 7
           +RDMH G
Sbjct: 185 LRDMHQG 191


>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 2   RDMHSGSA 9
           RDM SGS+
Sbjct: 630 RDMFSGSS 637


>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)

Query: 2  RDMHSGSA 9
          RDMHS  A
Sbjct: 52 RDMHSPGA 59


>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)

Query: 2  RDMHSGSA 9
          RDMHS  A
Sbjct: 52 RDMHSPGA 59


>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant

Query: 2  RDMHSGSA 9
          RDMHS  A
Sbjct: 52 RDMHSPGA 59


>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)

Query: 1   IRDMHS 6
           I+DMHS
Sbjct: 424 IKDMHS 429


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 4    MHSGS 8
            MHSGS
Sbjct: 2977 MHSGS 2981


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 4    MHSGS 8
            MHSGS
Sbjct: 2999 MHSGS 3003


>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)

Query: 4    MHSGS 8
            MHSGS
Sbjct: 2972 MHSGS 2976




105|SequenceR|530|521|DRIAGIRDMH

>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  DRIAGI 6
          DRIAG+
Sbjct: 17 DRIAGL 22




106|SequenceR|535|526|TESLNDRIAG

>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   ESLNDRIAG 10
           ++LN R+AG
Sbjct: 462 DTLNPRVAG 470


>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   ESLNDRIAG 10
           ++LN R+AG
Sbjct: 462 DTLNPRVAG 470


>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   ESLNDRIAG 10
           ++LN R+AG
Sbjct: 462 DTLNPRVAG 470


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 3    SLNDRIAG 10
            S+NDR+ G
Sbjct: 1520 SVNDRVVG 1527


>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1  TESLNDRIAG 10
          T + +DRIAG
Sbjct: 12 TTTESDRIAG 21


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 763 TESMMSRIAA 772


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 763 TESMMSRIAA 772


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 763 TESMMSRIAA 772


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 757 TESMMSRIAA 766


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 763 TESMMSRIAA 772


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 763 TESMMSRIAA 772


>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 763 TESMMSRIAA 772


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 5    NDRIAG 10
            ND++AG
Sbjct: 4431 NDKVAG 4436


>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   TESLNDRIAG 10
           TES+  RIA 
Sbjct: 267 TESMMSRIAA 276




107|SequenceR|540|531|AMTSATESLN

 ***** No hits found ******


108|SequenceR|545|536|SAGALAMTSA

>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1   SAGALAMTSA 10
           S GA+ +TSA
Sbjct: 398 SGGAVTLTSA 407


>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   SAGALAMTS 9
           +AG++A+TS
Sbjct: 270 AAGSVALTS 278


>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   SAGALAMTS 9
           +AG++A+TS
Sbjct: 270 AAGSVALTS 278


>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain

Query: 1   SAGALAMTSA 10
           S GA+ +TSA
Sbjct: 398 SGGAVTLTSA 407


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 4   ALAMTSA 10
           ALA+TSA
Sbjct: 196 ALALTSA 202




109|SequenceR|550|541|LSGTISAGAL

>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)

Query: 1   LSGTISAG 8
           L+G +SAG
Sbjct: 873 LTGLVSAG 880


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LSGTISAGAL 10
           L+GT+S G +
Sbjct: 257 LNGTLSKGKI 266




110|SequenceR|555|546|MASGSLSGTI

>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 3   SGSLSGT 9
           +GS+SGT
Sbjct: 217 TGSMSGT 223


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   SGSLSGT 9
           +GS+SGT
Sbjct: 217 TGSMSGT 223




111|SequenceR|560|551|NFCNVMASGS

>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2  FCNVMAS 8
          FCN M +
Sbjct: 86 FCNTMCT 92


>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2  FCNVMAS 8
          FCN M +
Sbjct: 85 FCNTMCT 91


>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)

Query: 2  FCNVMAS 8
          FCN M +
Sbjct: 85 FCNTMCT 91


>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)

Query: 3   CNVMASGS 10
           CN+  SG+
Sbjct: 239 CNIFKSGN 246


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2  FCNVM 6
          FCN+M
Sbjct: 72 FCNIM 76


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2  FCNVM 6
          FCN+M
Sbjct: 72 FCNIM 76




112|SequenceR|565|556|QVELRNFCNV

>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)

Query: 1   QVELRNFCN 9
           QVE RNF N
Sbjct: 696 QVEGRNFRN 704


>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1   QVELRNFCN 9
           QVE RNF N
Sbjct: 696 QVEGRNFRN 704


>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)

Query: 3  ELRNFCNV 10
          ELRNF ++
Sbjct: 82 ELRNFADL 89


>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)

Query: 3  ELRNFCNV 10
          ELRNF ++
Sbjct: 82 ELRNFADL 89


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 5   RNFCNV 10
           RNFC V
Sbjct: 240 RNFCPV 245


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 5   RNFCNV 10
           RNFC V
Sbjct: 240 RNFCPV 245


>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 3    ELRNFC 8
            ELR++C
Sbjct: 1493 ELRDYC 1498


>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   VELRNFC 8
           V+LRN C
Sbjct: 755 VDLRNLC 761


>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 MRNFC 54


>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain

Query: 6   NFCNV 10
           NFCN+
Sbjct: 121 NFCNL 125


>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain

Query: 6   NFCNV 10
           NFCN+
Sbjct: 121 NFCNL 125


>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P

Query: 3  ELRNFCN 9
          +LRNF N
Sbjct: 7  KLRNFLN 13


>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)

Query: 4  LRNFC 8
          +RNFC
Sbjct: 50 VRNFC 54


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1   QVELRNFCN 9
           QV+ R  CN
Sbjct: 311 QVDSRRACN 319




113|SequenceR|570|561|KQVDAQVELR

>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 1    KQVDAQVEL 9
            ++VD +VEL
Sbjct: 1929 EEVDGKVEL 1937


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1    KQVDAQVEL 9
            ++VD +VEL
Sbjct: 1927 EEVDGKVEL 1935


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1    KQVDAQVEL 9
            ++VD +VEL
Sbjct: 1927 EEVDGKVEL 1935


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1    KQVDAQVEL 9
            ++VD +VEL
Sbjct: 1927 EEVDGKVEL 1935


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1    KQVDAQVEL 9
            ++VD +VEL
Sbjct: 1927 EEVDGKVEL 1935


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1    KQVDAQVEL 9
            ++VD +VEL
Sbjct: 1927 EEVDGRVEL 1935


>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)

Query: 1   KQVDAQVELR 10
           + +DA+VEL+
Sbjct: 206 RAMDAEVELQ 215




114|SequenceR|575|566|LSYREKQVDA

>sp|NS3B_SARS|ORF3B protein|Severe acute respiratory syndrome coronavirus

Query: 2   SYREKQV 8
           S+R+KQV
Sbjct: 147 SFRKKQV 153


>sp|M2_I30A0|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 3  YREKQVDA 10
          YR+KQ +A
Sbjct: 76 YRQKQQNA 83


>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)

Query: 3   YREKQVD 9
           YR KQ D
Sbjct: 170 YRTKQTD 176


>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967

Query: 3  YREKQVDA 10
          YR+KQ +A
Sbjct: 76 YRQKQQNA 83




115|SequenceR|580|571|GSEGSLSYRE

>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  GSEGSLSYR 9
          GSE SLSYR
Sbjct: 18 GSERSLSYR 26


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3    EGSLSYRE 10
            EGS+SY E
Sbjct: 2917 EGSISYSE 2924


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3    EGSLSYRE 10
            EGS+SY E
Sbjct: 2917 EGSISYSE 2924


>sp|UL128_HCMVM|ENVELOPE protein UL128|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   GSEGSLSYR 9
           G+ GS+ YR
Sbjct: 123 GAAGSVPYR 131


>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   GSEGSLSYR 9
           G+ GS+ YR
Sbjct: 123 GAAGSVPYR 131


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 2   SEGSLSY 8
           SEG++SY
Sbjct: 174 SEGAISY 180


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3    EGSLSYR 9
            EGS +YR
Sbjct: 1728 EGSTTYR 1734


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   SEGSLSY 8
           SEG+L Y
Sbjct: 339 SEGTLQY 345


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 2   SEGSLSY 8
           SEG+L Y
Sbjct: 339 SEGTLQY 345


>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 3   EGSLSYRE 10
           EG+L Y+E
Sbjct: 151 EGNLHYKE 158


>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain

Query: 1   GSEGSLSYR 9
           G EG L YR
Sbjct: 942 GEEGRLLYR 950


>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1

Query: 2   SEGSLSY 8
           SEG++SY
Sbjct: 174 SEGAISY 180


>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)

Query: 1   GSEGSLSY 8
           G E S+SY
Sbjct: 516 GQEDSISY 523




116|SequenceR|585|576|GLSVTGSEGS

>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 2   LSVTGSEG 9
           LS+ GSEG
Sbjct: 285 LSILGSEG 292


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 2   LSVTGSEG 9
           LS+ GSEG
Sbjct: 285 LSILGSEG 292


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2   LSVTGSEGS 10
           LS +GS+GS
Sbjct: 620 LSYSGSDGS 628


>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)

Query: 4    VTGSEGS 10
            V+GSEG+
Sbjct: 1999 VSGSEGN 2005


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2   LSVTGSEG 9
           LS+ GS+G
Sbjct: 284 LSILGSDG 291


>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2   LSVTGSEG 9
           LS+ GS+G
Sbjct: 284 LSILGSDG 291


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 3    SVTGSE 8
            S+TGSE
Sbjct: 1766 SITGSE 1771




117|SequenceR|590|581|NDSVTGLSVT

>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   NDSVTGL 7
           NDS TGL
Sbjct: 150 NDSCTGL 156


>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)

Query: 2   DSVTGLSV 9
           D VTGLS+
Sbjct: 371 DLVTGLSI 378


>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   DSVTGLSV 9
           D VTGLS+
Sbjct: 371 DLVTGLSI 378


>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)

Query: 1   NDSVTGLS 8
           +DS TGL+
Sbjct: 576 DDSATGLA 583


>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)

Query: 1   NDSVTGLS 8
           +DS TGL+
Sbjct: 574 DDSATGLA 581


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 2    DSVTGLS 8
            DS+ GLS
Sbjct: 1312 DSIVGLS 1318


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 2    DSVTGLS 8
            DS+ GLS
Sbjct: 1310 DSIVGLS 1316


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 2    DSVTGLS 8
            DS+ GLS
Sbjct: 1331 DSIVGLS 1337


>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5

Query: 2   DSVTGLSV 9
           DSV+GL V
Sbjct: 182 DSVSGLRV 189


>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2

Query: 2   DSVTGLSV 9
           DSV+GL V
Sbjct: 182 DSVSGLRV 189




118|SequenceR|595|586|AKTSANDSVT

 ***** No hits found ******


119|SequenceR|600|591|ISGAMAKTSA

>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 1  ISGAMAK 7
          ISG MAK
Sbjct: 40 ISGKMAK 46


>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)

Query: 1  ISGAMAK 7
          ISG MAK
Sbjct: 40 ISGKMAK 46


>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1  ISGAMAK 7
          ISG MAK
Sbjct: 40 ISGKMAK 46


>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus

Query: 1  ISGAMAK 7
          ISG MAK
Sbjct: 40 ISGKMAK 46


>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate

Query: 1  ISGAMAK 7
          ISG MAK
Sbjct: 40 ISGKMAK 46


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2   SGAMAKT 8
           SGA AKT
Sbjct: 321 SGARAKT 327




120|SequenceR|605|596|IYSNLISGAM

>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus

Query: 2   YSNLISGAM 10
           +SNL+SGA+
Sbjct: 118 FSNLLSGAV 126


>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)

Query: 2   YSNLISGAM 10
           +SNL+SGA+
Sbjct: 118 FSNLLSGAV 126


>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)

Query: 2   YSNLISGAM 10
           +SNL+SGA+
Sbjct: 118 FSNLLSGAV 126


>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b

Query: 2   YSNLISGAM 10
           +SNL+SGA+
Sbjct: 118 FSNLLSGAV 126


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 2   YSNLISGAM 10
           +SNL SGA+
Sbjct: 118 FSNLFSGAV 126


>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)

Query: 2  YSNLISG 8
          Y+NLI+G
Sbjct: 83 YANLIAG 89


>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)

Query: 2  YSNLISG 8
          Y+NLI+G
Sbjct: 83 YANLIAG 89


>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)

Query: 2  YSNLISG 8
          Y+NLI+G
Sbjct: 83 YANLIAG 89


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   IYSNLISG 8
           + SNLISG
Sbjct: 783 LLSNLISG 790


>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)

Query: 2  YSNLISG 8
          Y+NLI+G
Sbjct: 83 YANLIAG 89


>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)

Query: 2  YSNLISG 8
          Y+NLI+G
Sbjct: 83 YANLIAG 89


>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69

Query: 1   IYSNLISGAM 10
           IYS   SG+M
Sbjct: 291 IYSRTPSGSM 300


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 2  YSNLISG 8
          +SN++SG
Sbjct: 23 FSNVVSG 29




121|SequenceR|610|601|EKDLPIYSNL

>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka

Query: 2   KDLPIYSN 9
           K+LPIY+N
Sbjct: 304 KNLPIYTN 311


>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)

Query: 2   KDLPIYSN 9
           K+LPIY+N
Sbjct: 304 KNLPIYTN 311


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    EKDLPIY 7
            EKD+P+Y
Sbjct: 1979 EKDIPLY 1985


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    EKDLPIY 7
            EKD+P+Y
Sbjct: 1979 EKDIPLY 1985


>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    EKDLPIY 7
            EKD+P+Y
Sbjct: 1979 EKDIPLY 1985


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    EKDLPIY 7
            EKD+P+Y
Sbjct: 1979 EKDIPLY 1985


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 1    EKDLPIY 7
            EKD+P+Y
Sbjct: 1979 EKDIPLY 1985


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 1    EKDLPIY 7
            +KD+P+Y
Sbjct: 2503 QKDIPLY 2509


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 1    EKDLPIY 7
            +KD+P+Y
Sbjct: 2503 QKDIPLY 2509


>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)

Query: 4    LPIYSNL 10
            LP+YS+L
Sbjct: 2180 LPVYSSL 2186


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 4  LPIYSNL 10
          LP YSN+
Sbjct: 60 LPFYSNV 66


>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30

Query: 3   DLPIYS 8
           D+PIYS
Sbjct: 397 DVPIYS 402


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 4   LPIYSNL 10
           +P+Y+NL
Sbjct: 669 IPVYNNL 675


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 4   LPIYSNL 10
           +P+Y+NL
Sbjct: 669 IPVYNNL 675


>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53

Query: 3   DLPIYS 8
           D+PIYS
Sbjct: 397 DVPIYS 402


>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)

Query: 1   EKDLPIYS 8
           EK+LP YS
Sbjct: 415 EKELPEYS 422


>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1  EKDLPI 6
          EKDLP+
Sbjct: 86 EKDLPL 91


>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1  EKDLPI 6
          EKDLP+
Sbjct: 86 EKDLPL 91


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   EKDLPIYSNL 10
           EK++  YSN+
Sbjct: 608 EKEISNYSNI 617


>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)

Query: 1  EKDLPIYSN 9
          E + PIY N
Sbjct: 42 ENEFPIYIN 50


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   KDLPIYSNL 10
           +DL IY+N+
Sbjct: 266 EDLGIYANI 274


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   KDLPIYSNL 10
           +DL IY+N+
Sbjct: 266 EDLGIYANI 274


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 2   KDLPIYSNL 10
           +DL IY+N+
Sbjct: 266 EDLGIYANI 274


>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 2  KDLPIYSN 9
          K++P+Y N
Sbjct: 36 KEIPLYIN 43


>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain

Query: 2  KDLPIYSN 9
          K++P+Y N
Sbjct: 36 KEIPLYIN 43




122|SequenceR|615|606|EMSNGEKDLP

>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 5  GEKDLP 10
          GE+DLP
Sbjct: 29 GERDLP 34


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)

Query: 5  GEKDLP 10
          GE+DLP
Sbjct: 29 GERDLP 34


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate

Query: 2  MSNGEKD 8
          M NGE D
Sbjct: 20 MDNGEND 26


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   EMSNGEKDL 9
           +  N EKDL
Sbjct: 644 QQENNEKDL 652


>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain

Query: 3   SNGEKDL 9
           +NGEK+L
Sbjct: 136 ANGEKEL 142


>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate

Query: 3   SNGEKDL 9
           +NGEK+L
Sbjct: 136 ANGEKEL 142


>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain

Query: 3   SNGEKDL 9
           +NGEK+L
Sbjct: 146 TNGEKEL 152


>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United

Query: 3   SNGEKDL 9
           +NGEK+L
Sbjct: 136 ANGEKEL 142


>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain

Query: 3   SNGEKDL 9
           +NGEK+L
Sbjct: 143 ANGEKEL 149


>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain

Query: 3   SNGEKDL 9
           +NGEK+L
Sbjct: 144 TNGEKEL 150


>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 4   NGEKDL 9
           NG+KDL
Sbjct: 721 NGDKDL 726




123|SequenceR|620|611|IDVQVEMSNG

>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 1    IDVQVEMS 8
            +D+QVEM+
Sbjct: 1261 LDLQVEMN 1268


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 2    DVQVEMSNG 10
            D+ +EM+NG
Sbjct: 1100 DLILEMTNG 1108


>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)

Query: 2   DVQVEMSNG 10
           D+Q+ ++NG
Sbjct: 631 DMQMNVTNG 639




124|SequenceR|625|616|SPKSEIDVQV

>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 1    SPKSEIDVQV 10
            SP  E+D Q+
Sbjct: 1169 SPSQEVDGQI 1178




125|SequenceR|630|621|NHRFKSPKSE

>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1  NHRFKSPKS 9
          +H FK+PKS
Sbjct: 77 SHLFKNPKS 85


>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)

Query: 1  NHRFKSPKS 9
          +H FK+PKS
Sbjct: 77 SHLFKNPKS 85


>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1  NHRFKSPKS 9
          +H FK+PKS
Sbjct: 77 SHLFKNPKS 85


>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1  NHRFKSPKS 9
          +H FK+PKS
Sbjct: 77 SHLFKNPKS 85


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1   NHRFKSPKSE 10
           +H F  PKSE
Sbjct: 871 SHAFPRPKSE 880


>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1  NHRFKSPKS 9
          +H FK+PKS
Sbjct: 77 SHLFKNPKS 85


>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)

Query: 2   HRFKSPKS 9
           H FK+PK+
Sbjct: 482 HCFKAPKN 489




126|SequenceR|635|626|SSSGSNHRFK

>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 3   SGSNHRF 9
           +GS HRF
Sbjct: 638 AGSEHRF 644


>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40

Query: 2   SSGSNHRF 9
           ++GS HRF
Sbjct: 133 NTGSYHRF 140


>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2

Query: 3   SGSNHR 8
           SGSNHR
Sbjct: 136 SGSNHR 141


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 3    SGSNHRF 9
            SG++HR+
Sbjct: 1417 SGASHRY 1423


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 1    SSSGSNHRF 9
            S +G+NH F
Sbjct: 1998 SGAGNNHLF 2006


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1   SSSGSNH 7
           SS+G NH
Sbjct: 225 SSAGYNH 231




127|SequenceR|640|631|SGDDVSSSGS

>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1    SGDDVSSSGS 10
            S D+V++SG+
Sbjct: 2086 SADNVAASGA 2095


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1    SGDDVSSSGS 10
            S D+V++SG+
Sbjct: 2085 SADNVAASGA 2094


>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   DDVSSSGS 10
           DDV +SGS
Sbjct: 397 DDVWTSGS 404


>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   DDVSSSGS 10
           DDV +SGS
Sbjct: 397 DDVWTSGS 404


>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 3   DDVSSSGS 10
           DDV +SGS
Sbjct: 387 DDVWTSGS 394


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 3   DDVSSSGS 10
           DDV +SGS
Sbjct: 124 DDVENSGS 131


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 3   DDVSSSGS 10
           DDV +SGS
Sbjct: 124 DDVENSGS 131




128|SequenceR|645|636|HSRTASGDDV

>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)

Query: 3   RTASGDDV 10
           R A+G+DV
Sbjct: 99  RVATGNDV 106


>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)

Query: 3   RTASGDDV 10
           R A+G+DV
Sbjct: 99  RVATGNDV 106


>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   RTASGDDV 10
           R A+G+DV
Sbjct: 99  RVATGNDV 106


>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   SRTASGD 8
           SRT+ GD
Sbjct: 367 SRTSGGD 373


>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)

Query: 2   SRTASGD 8
           +RT SGD
Sbjct: 206 ARTTSGD 212




129|SequenceR|650|641|SSGGAHSRTA

>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P

Query: 1   SSGGAHSR 8
           S GG HSR
Sbjct: 216 SLGGRHSR 223


>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)

Query: 1   SSGGAHSRTA 10
           + GGA+ RTA
Sbjct: 281 APGGANQRTA 290


>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus

Query: 1   SSGGAHSRTA 10
           + GGA+ RTA
Sbjct: 281 APGGANQRTA 290


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1   SSGGAHSR 8
           SSG AHS+
Sbjct: 610 SSGPAHSK 617


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1   SSGGAHSR 8
           SSG AHS+
Sbjct: 610 SSGPAHSK 617


>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain

Query: 1  SSGGAHSRTA 10
          +SGG HS  +
Sbjct: 67 TSGGIHSEIS 76


>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956

Query: 1   SSGGAHSRTA 10
           S+G  H RTA
Sbjct: 142 SNGTTHDRTA 151


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 2   SGGAHSR 8
           SGG H R
Sbjct: 430 SGGTHYR 436


>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)

Query: 1   SSGGAHSR 8
           S GG H+R
Sbjct: 106 SPGGTHAR 113


>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3  GGAHSRTA 10
          GGAH+  A
Sbjct: 7  GGAHAALA 14


>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3  GGAHSRTA 10
          GGAH+  A
Sbjct: 7  GGAHAALA 14




130|SequenceR|655|646|EPLGSSSGGA

>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   PLGSSSG 8
           P+GSSSG
Sbjct: 458 PIGSSSG 464


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2   PLGSSSG 8
           P+GSSSG
Sbjct: 460 PIGSSSG 466


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 2   PLGSSSGGA 10
           PLGS+ GG+
Sbjct: 152 PLGSNKGGS 160


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 2   PLGSSSGGA 10
           PLGS+ GG+
Sbjct: 155 PLGSNKGGS 163


>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P

Query: 1   EPLGSSSGG 9
           +P G S GG
Sbjct: 415 QPRGGSDGG 423


>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)

Query: 3   LGSSSGGA 10
           LG+S GGA
Sbjct: 805 LGASLGGA 812


>sp|NEP_I96A3|NUCLEAR export protein|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 3  LGSSSG 8
          LGSSSG
Sbjct: 21 LGSSSG 26


>sp|NEP_I96A2|NUCLEAR export protein|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 3  LGSSSG 8
          LGSSSG
Sbjct: 21 LGSSSG 26


>sp|NEP_I83A1|NUCLEAR export protein|Influenza A virus (strain A/Chile/1/1983

Query: 3  LGSSSG 8
          LGSSSG
Sbjct: 21 LGSSSG 26


>sp|NEP_I07A0|NUCLEAR export protein|Influenza A virus (strain

Query: 3  LGSSSG 8
          LGSSSG
Sbjct: 21 LGSSSG 26


>sp|NEP_I01A0|NUCLEAR export protein|Influenza A virus (strain A/Silky

Query: 3  LGSSSG 8
          LGSSSG
Sbjct: 21 LGSSSG 26


>sp|NEP_I00A1|NUCLEAR export protein|Influenza A virus (strain A/New

Query: 3  LGSSSG 8
          LGSSSG
Sbjct: 21 LGSSSG 26


>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3   LGSSSGGA 10
           LG+S GGA
Sbjct: 805 LGASLGGA 812


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 2   PLGSSSG 8
           P G+SSG
Sbjct: 650 PTGTSSG 656


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 2   PLGSSSG 8
           P G+SSG
Sbjct: 650 PTGTSSG 656


>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32

Query: 1   EPLGSSSGGA 10
           +PLGSSS   
Sbjct: 343 QPLGSSSTAV 352


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 3   LGSSSGG 9
           +GS SGG
Sbjct: 320 MGSGSGG 326


>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)

Query: 2   PLGSSSGGA 10
           P  SSSGGA
Sbjct: 290 PRSSSSGGA 298




131|SequenceR|660|651|ASSKGEPLGS

>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8

Query: 3   SKGEPLG 9
           S+G+PLG
Sbjct: 109 SRGQPLG 115


>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41

Query: 3   SKGEPLG 9
           S+G+PLG
Sbjct: 128 SRGQPLG 134


>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12

Query: 3   SKGEPLG 9
           S+G+PLG
Sbjct: 109 SRGQPLG 115


>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4  KGEPLG 9
          +GEPLG
Sbjct: 8  QGEPLG 13


>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4  KGEPLG 9
          +GEPLG
Sbjct: 8  QGEPLG 13


>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  SKGEPLGS 10
          S+G+PL S
Sbjct: 36 SRGQPLSS 43


>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  SKGEPLGS 10
          S+G+PL S
Sbjct: 36 SRGQPLSS 43


>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34

Query: 4  KGEPLG 9
          KG+PLG
Sbjct: 57 KGKPLG 62


>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain

Query: 3   SKGEPLGS 10
           +KG P+GS
Sbjct: 108 TKGWPIGS 115


>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United

Query: 3   SKGEPLGS 10
           +KG P+GS
Sbjct: 108 TKGWPIGS 115


>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate

Query: 3   SKGEPLGS 10
           +KG P+GS
Sbjct: 108 TKGWPIGS 115


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 2   SSKGEPL 8
           +SKGEP+
Sbjct: 606 TSKGEPV 612


>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)

Query: 1  ASSKGEPLGS 10
           ++ G+PLG+
Sbjct: 24 GAASGDPLGA 33


>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56

Query: 4   KGEPLGS 10
           +G+PLG+
Sbjct: 143 RGQPLGA 149


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 1  ASSKGEPLGS 10
           +  G+PLG+
Sbjct: 6  GAESGDPLGA 15


>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26


>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)

Query: 4  KGEPLGS 10
          K EP+GS
Sbjct: 20 KAEPIGS 26




132|SequenceR|665|656|KSWKTASSKG

>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus

Query: 1  KSWKTASSKG 10
          K W+ A SKG
Sbjct: 67 KRWQLALSKG 76


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 1   KSWKTASS 8
           +SW +ASS
Sbjct: 138 RSWTSASS 145


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2    SWKTASSKG 10
            S+K AS KG
Sbjct: 1729 SYKVASKKG 1737


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   KSWKTASSKG 10
           + WK+ +S+G
Sbjct: 279 EDWKSDASQG 288


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   KSWKTASSKG 10
           + WK+ +S+G
Sbjct: 279 EDWKSDASQG 288


>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1   KSWKTASSKG 10
           + WK+ +S+G
Sbjct: 258 EDWKSDASQG 267




133|SequenceR|670|661|GATAEKSWKT

>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 1   GATAEKSWKT 10
           GAT   +W+T
Sbjct: 210 GATIAAAWRT 219




134|SequenceR|675|666|SKSKKGATAE

 ***** No hits found ******


135|SequenceR|680|671|KRLKGSKSKK

>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 2   RLKGSKSKK 10
           +LKG  +KK
Sbjct: 196 KLKGKPTKK 204




136|SequenceR|685|676|KMNGKKRLKG

>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)

Query: 3   NGKKRLKG 10
           +GK+RLKG
Sbjct: 312 SGKERLKG 319


>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2023 MDGEYRLRG 2031


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2024 MDGEYRLRG 2032


>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2025 MDGEYRLRG 2033


>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2021 MDGEYRLRG 2029


>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2025 MDGEYRLRG 2033


>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2024 MDGEYRLRG 2032


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2024 MDGEYRLRG 2032


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2024 MDGEYRLRG 2032


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 4    GKKRLKG 10
            GK RLKG
Sbjct: 2196 GKLRLKG 2202


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2023 MDGEYRLRG 2031


>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)

Query: 4    GKKRLKG 10
            GK RLKG
Sbjct: 2195 GKLRLKG 2201


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 4    GKKRLK 9
            GKKR+K
Sbjct: 1021 GKKRIK 1026


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 4   GKKRLK 9
           GKKR+K
Sbjct: 894 GKKRIK 899


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 4   GKKRLK 9
           GKKR+K
Sbjct: 954 GKKRIK 959


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 4    GKKRLK 9
            GKKR+K
Sbjct: 1030 GKKRIK 1035


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 4    GKKRLK 9
            GKKR+K
Sbjct: 1025 GKKRIK 1030


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 4    GKKRLK 9
            GKKR+K
Sbjct: 1030 GKKRIK 1035


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2    MNGKKRLKG 10
            M+G+ RL+G
Sbjct: 2018 MDGEFRLRG 2026




137|SequenceR|690|681|RTENIKMNGK

>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate

Query: 2  TENIKMN 8
          TENIK+N
Sbjct: 47 TENIKIN 53


>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1   RTENIKMN 8
           RT N+K+N
Sbjct: 181 RTHNLKVN 188


>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1   RTENIKMN 8
           RT N+K+N
Sbjct: 181 RTHNLKVN 188


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1   RTENIK 6
           RTENIK
Sbjct: 358 RTENIK 363


>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi

Query: 3   ENIKMNG 9
           EN+KM G
Sbjct: 295 ENLKMKG 301


>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 1   RTENIKMNG 9
           RT NI MN 
Sbjct: 564 RTNNIHMNS 572


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 1   RTENIKMN 8
           RT NI MN
Sbjct: 698 RTNNIHMN 705


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3   ENIKMNGK 10
           ENI + GK
Sbjct: 282 ENISLEGK 289


>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)

Query: 3   ENIKMNGK 10
           +NI MN K
Sbjct: 490 QNIHMNAK 497


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 3   ENIKMNGK 10
           ENI + GK
Sbjct: 282 ENISLEGK 289


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RTENIKMNGK 10
           R+ENI  N K
Sbjct: 269 RSENISDNAK 278


>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   RTENIKMNGK 10
           R+ENI  N K
Sbjct: 267 RSENISDNAK 276


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 3   ENIKMNGK 10
           ENI + GK
Sbjct: 282 ENISLEGK 289


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 3   ENIKMNGK 10
           ENI + GK
Sbjct: 282 ENISLEGK 289


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 3   ENIKMNGK 10
           ENI + GK
Sbjct: 282 ENISLEGK 289


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 3   ENIKMNGK 10
           ENI + GK
Sbjct: 282 ENISLEGK 289


>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1

Query: 1   RTENIKMNGK 10
           R+ENI  N K
Sbjct: 270 RSENITNNAK 279


>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe

Query: 1   RTENIKMNG 9
           +T N+KM G
Sbjct: 179 KTINVKMRG 187




138|SequenceR|695|686|ADMDERTENI

>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 2   DMDERTENI 10
           D D+R ENI
Sbjct: 590 DYDDRGENI 598


>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7

Query: 1   ADMDERTENI 10
           AD+D+  ENI
Sbjct: 354 ADIDDIDENI 363


>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 47 IDERSESI 54


>sp|PAX_I00A0|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 50 IDERSESI 57


>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61


>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3  MDERTENI 10
          +DER+E+I
Sbjct: 54 IDERSESI 61




139|SequenceR|700|691|QELLQADMDE

>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain

Query: 1   QELLQA 6
           QELLQA
Sbjct: 104 QELLQA 109


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 2   ELLQADM 8
           ELLQ+D+
Sbjct: 485 ELLQSDL 491


>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2   ELLQADM 8
           ELLQ+D+
Sbjct: 485 ELLQSDL 491


>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)

Query: 2   ELLQADM 8
           ELLQ+D+
Sbjct: 485 ELLQSDL 491


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas)

Query: 1  QELLQADM 8
          QELL ++M
Sbjct: 55 QELLNSEM 62




140|SequenceR|705|696|SNTSQQELLQ

 ***** No hits found ******


141|SequenceR|710|701|AEFESSNTSQ

>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    EFESSNTSQ 10
            EF SS TS+
Sbjct: 1825 EFSSSQTSE 1833


>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    EFESSNTSQ 10
            EF SS TS+
Sbjct: 1825 EFSSSQTSE 1833


>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    EFESSNTSQ 10
            EF SS TS+
Sbjct: 1825 EFSSSQTSE 1833


>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    EFESSNTSQ 10
            EF SS TS+
Sbjct: 1825 EFSSSQTSE 1833


>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain

Query: 2    EFESSNTSQ 10
            EF SS TS+
Sbjct: 1825 EFSSSQTSE 1833


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4   ESSNTS 9
           ESSNTS
Sbjct: 181 ESSNTS 186




142|SequenceR|715|706|DSLSPAEFES

>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1985 SLSPAWFEA 1993


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1988 SLSPAWFEA 1996


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1986 SLSPAWFEA 1994


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1988 SLSPAWFEA 1996


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1984 SLSPAWFEA 1992


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1985 SLSPAWFEA 1993


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1985 SLSPAWFEA 1993


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 2    SLSPAEFES 10
            SLSPA FE+
Sbjct: 1993 SLSPAWFEA 2001


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    DSLSPAEFES 10
            DSLSP+ + S
Sbjct: 6667 DSLSPSHYWS 6676


>sp|PG040_MONPV|SUPERINFECTION exclusion protein|Monkeypox virus (MPXV)

Query: 1   DSLSPAEFE 9
           DS++PA+ E
Sbjct: 250 DSITPAKLE 258


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 3    LSPAEFE 9
            +SPAEF+
Sbjct: 3502 VSPAEFK 3508


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 3    LSPAEFE 9
            +SPAEF+
Sbjct: 3502 VSPAEFK 3508


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 3   LSPAEFE 9
           LSP EFE
Sbjct: 730 LSPNEFE 736


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 3   LSPAEFE 9
           LSP EFE
Sbjct: 726 LSPNEFE 732


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 3   LSPAEFE 9
           LSP EFE
Sbjct: 723 LSPNEFE 729


>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)

Query: 3    LSPAEFES 10
            L P +FES
Sbjct: 1363 LKPGDFES 1370


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 5   PAEFES 10
           PAEF+S
Sbjct: 444 PAEFDS 449


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 5   PAEFES 10
           PAEF+S
Sbjct: 444 PAEFDS 449


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 5   PAEFES 10
           PAEF+S
Sbjct: 444 PAEFDS 449


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 5   PAEFES 10
           PAEF+S
Sbjct: 444 PAEFDS 449




143|SequenceR|720|711|VSPMSDSLSP

>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7

Query: 3   PMSDSLSP 10
           PM+D L P
Sbjct: 102 PMADGLKP 109


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 1    VSPMSDSLSP 10
            +SP   +LSP
Sbjct: 1157 ISPKKTTLSP 1166


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 1    VSPMSDSLSP 10
            +SP   +LSP
Sbjct: 1157 ISPKKTTLSP 1166


>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate

Query: 5   SDSLSP 10
           SDSLSP
Sbjct: 260 SDSLSP 265


>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain

Query: 5   SDSLSP 10
           SDSLSP
Sbjct: 260 SDSLSP 265


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   MSDSLSP 10
           ++DSLSP
Sbjct: 601 VNDSLSP 607


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 4   MSDSLSP 10
           ++DSLSP
Sbjct: 609 VNDSLSP 615


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1   VSPMSDSLSP 10
           VS ++DSLSP
Sbjct: 487 VSKVADSLSP 496


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1   VSPMSDSLSP 10
           VS ++DSLSP
Sbjct: 487 VSKVADSLSP 496


>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate

Query: 3   PMSDSL 8
           P+SDSL
Sbjct: 136 PLSDSL 141


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 3   PMSDSLSP 10
           PM+D L P
Sbjct: 104 PMADGLKP 111


>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16

Query: 1  VSPMSD 6
          VSP+SD
Sbjct: 92 VSPLSD 97


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1   VSPMSDSLSP 10
           +S ++DSLSP
Sbjct: 487 ISKVADSLSP 496


>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain

Query: 1   VSPMSDSL 8
           ++P SDSL
Sbjct: 109 IAPQSDSL 116


>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1   VSPMSDSL 8
           ++P SDSL
Sbjct: 109 IAPQSDSL 116


>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate

Query: 1   VSPMSDSL 8
           ++P SDSL
Sbjct: 109 IAPQSDSL 116




144|SequenceR|725|716|SHSDAVSPMS

>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)

Query: 1   SHSDAVSPMS 10
           SH D ++P S
Sbjct: 232 SHEDGIAPTS 241


>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant

Query: 1   SHSDAVSPMS 10
           SH D ++P S
Sbjct: 232 SHEDGIAPTS 241


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 2   HSDAVSPM 9
           H+D +SP+
Sbjct: 146 HADGISPL 153


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1    SHSDAV 6
            +HSDAV
Sbjct: 1033 NHSDAV 1038




145|SequenceR|730|721|ESFHSSHSDA

>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)

Query: 2   SFHSSHSDA 10
           SF+S HSDA
Sbjct: 224 SFYSPHSDA 232


>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 2   SFHSSHSDA 10
           SF+S HSDA
Sbjct: 224 SFYSPHSDA 232


>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain

Query: 2   SFHSSHSDA 10
           SF+S HSDA
Sbjct: 224 SFYSPHSDA 232


>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3    FHSSHSDA 10
            FHS+ +DA
Sbjct: 1233 FHSNGTDA 1240


>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3    FHSSHSDA 10
            FHS+ +DA
Sbjct: 1233 FHSNGTDA 1240


>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3    FHSSHSDA 10
            FHS+ +DA
Sbjct: 1233 FHSNGTDA 1240


>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)

Query: 1  ESFHSSHS 8
          ES H SH+
Sbjct: 20 ESVHRSHA 27


>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A

Query: 1   ESFHSSHSDA 10
           E+FHS+ S+ 
Sbjct: 263 ETFHSTSSEG 272


>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A

Query: 1   ESFHSSHSDA 10
           E+FHS+ S+ 
Sbjct: 263 ETFHSTSSEG 272




146|SequenceR|735|726|DSCSFESFHS

>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 2    SCSFESFH 9
            SC F ++H
Sbjct: 1250 SCQFSAYH 1257


>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3   CSFESF 8
           CS+ESF
Sbjct: 349 CSYESF 354


>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate

Query: 2   SCSFES 7
           SC FES
Sbjct: 378 SCDFES 383


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2    SCSFESFH 9
            SC   +FH
Sbjct: 1236 SCQISAFH 1243


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1    DSCSFESFH 9
            D CS E F+
Sbjct: 3469 DKCSVEDFN 3477


Query: 2    SCSFE 6
            SCSFE
Sbjct: 3527 SCSFE 3531


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2    SCSFESFH 9
            SC   +FH
Sbjct: 1236 SCQISAFH 1243


>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)

Query: 3  CSFESF 8
          CS++SF
Sbjct: 69 CSYQSF 74


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2    SCSFESFH 9
            SC   +FH
Sbjct: 1236 SCQISAFH 1243


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1    DSCSFESFH 9
            D CS E F+
Sbjct: 3469 DKCSVEDFN 3477


Query: 2    SCSFE 6
            SCSFE
Sbjct: 3527 SCSFE 3531


>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2

Query: 2    SCSFESFH 9
            SC   +FH
Sbjct: 1234 SCQISAFH 1241


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2    SCSFESFH 9
            SC   +FH
Sbjct: 1236 SCQISAFH 1243


>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)

Query: 3  CSFESF 8
          CS++SF
Sbjct: 69 CSYQSF 74


>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35

Query: 2   SCSFESFH 9
           +C ++ FH
Sbjct: 162 ACRYKKFH 169


>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2   SCSFESFH 9
           +C ++ FH
Sbjct: 162 ACRYKKFH 169


>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11

Query: 2   SCSFESFH 9
           +C ++ FH
Sbjct: 162 ACRYKKFH 169


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2    SCSFESFH 9
            SC   +FH
Sbjct: 1236 SCQISAFH 1243


>sp|PG132_VARV|VIRION morphogenesis protein OPG132|Variola virus

Query: 3  CSFESF 8
          CS++SF
Sbjct: 69 CSYQSF 74


>sp|PG132_VAR67|VIRION morphogenesis protein OPG132|Variola virus (isolate

Query: 3  CSFESF 8
          CS++SF
Sbjct: 69 CSYQSF 74


>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P

Query: 1   DSCSFES 7
           D+C+F+S
Sbjct: 130 DACTFQS 136


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 3   CSFESFH 9
           C FE++H
Sbjct: 235 CLFETYH 241


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1    DSCSFESFH 9
            D CS E F+
Sbjct: 3527 DVCSIEDFN 3535


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1    DSCSFESFH 9
            D CS E F+
Sbjct: 3507 DVCSIEDFN 3515


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1    DSCSFESFH 9
            D CS E F+
Sbjct: 3527 DVCSIEDFN 3535


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1    DSCSFESFH 9
            D CS E F+
Sbjct: 3507 DVCSIEDFN 3515




147|SequenceR|740|731|KMSELDSCSF

>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)

Query: 5   LDSCSF 10
           LDSCS+
Sbjct: 114 LDSCSY 119




148|SequenceR|745|736|HSCSTKMSEL

>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)

Query: 3   CSTKMSE 9
           CSTK+SE
Sbjct: 214 CSTKLSE 220


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 3   CSTKMSE 9
           CSTK+SE
Sbjct: 214 CSTKLSE 220


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2   SCSTK 6
           SCSTK
Sbjct: 305 SCSTK 309


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2   SCSTK 6
           SCSTK
Sbjct: 305 SCSTK 309


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2   SCSTK 6
           SCSTK
Sbjct: 305 SCSTK 309


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2   SCSTK 6
           SCSTK
Sbjct: 305 SCSTK 309


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 3   CSTKMSE 9
           CST +SE
Sbjct: 213 CSTDLSE 219


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 2   SCSTK 6
           SCSTK
Sbjct: 305 SCSTK 309


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 3   CSTKMSE 9
           CST +SE
Sbjct: 213 CSTDLSE 219


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 3   CSTKMSE 9
           CST +SE
Sbjct: 213 CSTDLSE 219




149|SequenceR|750|741|YDSSGHSCST

>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P

Query: 2   DSSGHSCS 9
           D  GHSCS
Sbjct: 337 DCIGHSCS 344


>sp|DUT_HHV2H|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 2 (strain

Query: 4   SGHSCS 9
           SGH+C+
Sbjct: 275 SGHACA 280


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1    YDSSGHSC 8
            Y+S G SC
Sbjct: 2698 YNSQGQSC 2705


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1    YDSSGHSC 8
            Y+S G SC
Sbjct: 2689 YNSRGQSC 2696


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 1   YDSSGH 6
           Y+S+GH
Sbjct: 391 YESTGH 396


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 1    YDSSGHSCST 10
            Y+S G  C T
Sbjct: 2692 YNSRGQLCGT 2701


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1   YDSSGHS 7
           Y SSGH+
Sbjct: 295 YSSSGHA 301




150|SequenceR|755|746|AFRTHYDSSG

>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   RTHYD 7
           RTHYD
Sbjct: 345 RTHYD 349


>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)

Query: 3   RTHYD 7
           RTHYD
Sbjct: 343 RTHYD 347


>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDSS 9
          +R HYDS+
Sbjct: 40 YRHHYDSN 47


>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDS 8
          +R HYDS
Sbjct: 40 YRHHYDS 46


>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDSS 9
          +R HYDS+
Sbjct: 40 YRHHYDSN 47


>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)

Query: 2   FRTHYDSSG 10
           F+TH D+ G
Sbjct: 93  FQTHLDAIG 101


>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDS 8
          +R HYDS
Sbjct: 40 YRHHYDS 46


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2   FRTHYDSS 9
           FR H+D++
Sbjct: 594 FRKHHDAT 601


>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDS 8
          +R HYDS
Sbjct: 40 YRHHYDS 46


>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDS 8
          +R HYDS
Sbjct: 40 YRHHYDS 46


>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDS 8
          +R HYDS
Sbjct: 40 YRHHYDS 46


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 2   FRTHY 6
           FRTH+
Sbjct: 626 FRTHF 630


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2   FRTHY 6
           FRTH+
Sbjct: 626 FRTHF 630


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   FRTHY 6
           FRTH+
Sbjct: 626 FRTHF 630


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1   AFRTHY 6
           +FR HY
Sbjct: 247 SFRVHY 252


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 2   FRTHY 6
           FRTH+
Sbjct: 626 FRTHF 630


>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)

Query: 5  HYDSSG 10
          H DSSG
Sbjct: 26 HLDSSG 31


>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11

Query: 3   RTHYDSSG 10
           R H D+SG
Sbjct: 187 REHADTSG 194


>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDSS 9
          +R HY+S+
Sbjct: 40 YRHHYEST 47


>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)

Query: 1   AFRTHYDSSG 10
           A R H+DS+ 
Sbjct: 651 AARLHWDSAA 660


>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDS 8
          +R HY+S
Sbjct: 40 YRHHYES 46


>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1  AFRTHYDSS 9
          ++R HY+S+
Sbjct: 39 SYRHHYEST 47


>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 2  FRTHYDSS 9
          +R HY+S+
Sbjct: 40 YRHHYEST 47


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 1   AFRTHYDSSG 10
           AF+ HY   G
Sbjct: 513 AFKAHYSLLG 522




151|SequenceR|760|751|LINVTAFRTH

>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1    LINVTAFRTH 10
            ++NV AFR +
Sbjct: 2022 VLNVEAFRKY 2031


>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2   INVTAFR 8
           +N TAFR
Sbjct: 375 LNATAFR 381


>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus

Query: 2   INVTAFR 8
           +N TAFR
Sbjct: 375 LNATAFR 381


>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2   INVTAFRT 9
           IN+T F+T
Sbjct: 233 INITRFQT 240


>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 2   INVTAFR 8
           IN+T FR
Sbjct: 226 INITNFR 232




152|SequenceR|765|756|NEVEPLINVT

>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5   PLINVT 10
           PLINVT
Sbjct: 546 PLINVT 551


>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5   PLINVT 10
           PLINVT
Sbjct: 546 PLINVT 551


>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5   PLINVT 10
           PLINVT
Sbjct: 546 PLINVT 551


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 1  NEVEPLIN 8
          N+VEP+ N
Sbjct: 36 NQVEPISN 43


>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)

Query: 3  VEPLINVT 10
          + PL+NVT
Sbjct: 69 LRPLVNVT 76


>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   EVEPLI 7
           EVEPL+
Sbjct: 230 EVEPLL 235


>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2   EVEPLI 7
           EVEPL+
Sbjct: 230 EVEPLL 235


>sp|MATRX_CHAV|MATRIX protein|Chandipura virus (strain I653514) (CHPV)

Query: 1   NEVEPLIN 8
           +E+EP++N
Sbjct: 187 SELEPILN 194


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 2    EVEPLINV 9
            E++P +NV
Sbjct: 2123 EIKPAVNV 2130


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 2    EVEPLINV 9
            E++P +NV
Sbjct: 2123 EIKPAVNV 2130


>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)

Query: 5   PLINVT 10
           PL+NVT
Sbjct: 430 PLVNVT 435


>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)

Query: 5   PLINVT 10
           PL+NVT
Sbjct: 430 PLVNVT 435


>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5

Query: 1   NEVEPLI 7
           NEV PL+
Sbjct: 143 NEVAPLL 149


>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2

Query: 1   NEVEPLI 7
           NEV PL+
Sbjct: 143 NEVAPLL 149


>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12

Query: 1   NEVEPLIN 8
           NEV PL++
Sbjct: 145 NEVAPLLH 152


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 1   NEVEPLINV 9
           NE+E  IN+
Sbjct: 679 NEIERYINI 687


>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7

Query: 1   NEVEPLI 7
           NEV PL+
Sbjct: 143 NEVAPLL 149


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 1    NEVEPLI 7
            N+VEP I
Sbjct: 1621 NQVEPTI 1627




153|SequenceR|770|761|NELRDNEVEP

>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United

Query: 3   LRDNEVE 9
           LRDNE+E
Sbjct: 148 LRDNEIE 154


>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P

Query: 1   NELRDNEVEP 10
           N+ RD+ VEP
Sbjct: 246 NDGRDDNVEP 255


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 1   NELRDNEV 8
           N+LRDN V
Sbjct: 329 NKLRDNSV 336


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 2    ELRDNEVEP 10
            +L++NE++P
Sbjct: 4125 KLQNNEIKP 4133


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 2    ELRDNEVEP 10
            +L++NE++P
Sbjct: 4125 KLQNNEIKP 4133


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 1   NELRDNEV 8
           N+L+DN V
Sbjct: 329 NKLKDNSV 336


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 1   NELRDNEV 8
           N+L+DN V
Sbjct: 329 NKLKDNSV 336


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 1   NELRDNEV 8
           N+L+DN V
Sbjct: 329 NKLKDNSV 336


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 1   NELRDNEV 8
           N+L+DN V
Sbjct: 329 NKLKDNSV 336


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 1  NELRDN 6
          N+LRDN
Sbjct: 94 NKLRDN 99


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 1   NELRDNEV 8
           N+L+DN +
Sbjct: 329 NKLKDNSI 336


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 3   LRDNEVE 9
           L DNEV+
Sbjct: 865 LEDNEVD 871


>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24

Query: 4  RDNEVEP 10
          +D EVEP
Sbjct: 32 QDTEVEP 38




154|SequenceR|775|766|CQHPSNELRD

>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)

Query: 4  PSNELRD 10
          P NELRD
Sbjct: 53 PENELRD 59


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CQHPSNELR 9
            C+H +NE R
Sbjct: 6409 CRHHANEYR 6417


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    CQHPSNELR 9
            C+H +NE R
Sbjct: 6386 CRHHANEYR 6394


>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993

Query: 1   CQHPSNE 7
           CQ+P+NE
Sbjct: 337 CQNPNNE 343


>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977

Query: 1   CQHPSNE 7
           CQ+P+NE
Sbjct: 337 CQNPNNE 343


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1    CQHPSN 6
            C HP+N
Sbjct: 1397 CHHPAN 1402


>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEIR 406


>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)

Query: 2   QHPSNELR 9
           Q PS ELR
Sbjct: 425 QDPSGELR 432


>sp|US01_HCMVM|PROTEIN US1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3  HPSNELR 9
          HP++ELR
Sbjct: 47 HPASELR 53


>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  CQHPSNELRD 10
          CQ+ ++ LRD
Sbjct: 42 CQYSADVLRD 51


>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  CQHPSNELRD 10
          CQ+ ++ LRD
Sbjct: 42 CQYSADVLRD 51


>sp|US01_HCMVA|UNCHARACTERIZED protein HQLF3|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3  HPSNELR 9
          HP++ELR
Sbjct: 47 HPASELR 53


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])

Query: 2   QHPSNELR 9
            HP+ E+R
Sbjct: 399 HHPTTEVR 406


>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|GAG_HTLV2|GAG polyprotein|Human T-cell leukemia virus 2

Query: 1   CQHPSNELRD 10
           CQ PS+  RD
Sbjct: 389 CQDPSHWKRD 398


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1  CQHPSNELRD 10
          C H + E+RD
Sbjct: 87 CVHQNIEVRD 96


>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1   CQHPSNELRD 10
           CQ PS+  RD
Sbjct: 389 CQDPSHWKRD 398


>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2

Query: 1   CQHPSNELRD 10
           CQ PS+  RD
Sbjct: 389 CQDPSHWKRD 398


>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|GL_VZVO|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Oka vaccine)

Query: 2   QHPSNELRD 10
           +H S ++RD
Sbjct: 114 EHKSGDIRD 122


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1    CQHPSNEL 8
            C H  NEL
Sbjct: 3238 CSHHFNEL 3245


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 1    CQHPSNEL 8
            C H  NEL
Sbjct: 3234 CSHHFNEL 3241


>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968

Query: 1   CQHPSNE 7
           C++P+NE
Sbjct: 337 CRNPNNE 343


>sp|GL_VZVD|ENVELOPE glycoprotein L|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2   QHPSNELRD 10
           +H S ++RD
Sbjct: 113 EHKSGDIRD 121


>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 3   HPSNELRD 10
           HP + +RD
Sbjct: 880 HPFSRIRD 887




155|SequenceR|780|771|VVSISCQHPS

>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 1   VVSISCQHPS 10
           VVS+ C+H +
Sbjct: 504 VVSVDCKHKT 513


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 2   VSISCQHP 9
           VS+ C HP
Sbjct: 161 VSVKCTHP 168


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 2   VSISCQHP 9
           VS+ C HP
Sbjct: 161 VSVKCTHP 168


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2   VSISCQHP 9
           VS+ C HP
Sbjct: 161 VSVKCTHP 168


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 2   VSISCQHP 9
           VS+ C HP
Sbjct: 161 VSVKCTHP 168


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 1   VVSISCQHPS 10
           VVS+ C+H +
Sbjct: 498 VVSLDCKHKA 507


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 1   VVSISCQHPS 10
           VVS+ C+H +
Sbjct: 499 VVSLDCKHKA 508


>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)

Query: 1  VVSISCQHPS 10
          +V+I C++PS
Sbjct: 16 IVNILCKNPS 25


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1   VVSISCQHP 9
           ++ +SC HP
Sbjct: 696 IIMVSCDHP 704


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 5   SCQHP 9
           +CQHP
Sbjct: 312 TCQHP 316


>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 5   SCQHP 9
           +CQHP
Sbjct: 312 TCQHP 316


>sp|NS8B_SARS|ORF8B protein|Severe acute respiratory syndrome coronavirus

Query: 2  VSISCQHPS 10
          V+I+CQ P+
Sbjct: 44 VTINCQDPA 52


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   VSISCQHPS 10
           V I+C  PS
Sbjct: 289 VEITCTRPS 297


>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35

Query: 3   SISCQHPS 10
           +++CQ PS
Sbjct: 423 AVTCQKPS 430


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   VSISCQHPS 10
           V I+C  PS
Sbjct: 290 VKINCTRPS 298


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 2   VSISCQHPS 10
           +SIS QH S
Sbjct: 98  ISISPQHKS 106


>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2   VSISCQHPS 10
           V I+C  PS
Sbjct: 300 VEINCTRPS 308


>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13

Query: 3   SISCQHPS 10
           +I+CQ P+
Sbjct: 420 AITCQKPT 427


>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b

Query: 3   SISCQHPS 10
           +I+CQ P+
Sbjct: 420 AITCQKPT 427


>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a

Query: 3   SISCQHPS 10
           +I+CQ P+
Sbjct: 420 AITCQKPT 427


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1   VVSISCQHP 9
           ++ +SC HP
Sbjct: 697 IIMVSCVHP 705


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1    VVSISCQHP 9
            V  I C HP
Sbjct: 1634 VQKIQCSHP 1642


>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34

Query: 3   SISCQHP 9
           +I+CQ P
Sbjct: 450 AITCQRP 456


>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11

Query: 3   SISCQHPS 10
           +I+CQ P+
Sbjct: 421 AITCQKPT 428


>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1   VVSISCQHPS 10
           +VS  C++P+
Sbjct: 128 IVSPRCEYPA 137


>sp|VE6_HPV53|PROTEIN E6|Human papillomavirus type 53

Query: 6   CQHP 9
           CQHP
Sbjct: 110 CQHP 113


>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African

Query: 2   VSISCQHP 9
           +S SC HP
Sbjct: 446 ISHSCTHP 453


>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1

Query: 1   VVSISCQHPS 10
           +VS  C++P+
Sbjct: 128 IVSPRCEYPA 137


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4    ISCQH 8
            +SCQH
Sbjct: 2009 VSCQH 2013


>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64

Query: 3   SISCQHP 9
           +I+CQ P
Sbjct: 112 AITCQRP 118


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 2   VSISCQHP 9
           +S SC HP
Sbjct: 446 ISHSCTHP 453


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 2   VSISCQHP 9
           +S SC HP
Sbjct: 446 ISHSCTHP 453


>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)

Query: 4   ISCQHPS 10
           + C HPS
Sbjct: 209 LECAHPS 215




156|SequenceR|785|776|SATQTVVSIS

>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P

Query: 1   SATQTVVS 8
           SA+QTVVS
Sbjct: 613 SASQTVVS 620




157|SequenceR|790|781|SVESCSATQT

>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 1    SVESCSATQ 9
            S+E+C+A Q
Sbjct: 1477 SIETCTAPQ 1485


>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)

Query: 1   SVESCSATQT 10
           +++SC+ TQT
Sbjct: 606 NLQSCTDTQT 615


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 2   VESCSATQ 9
           VESCS T+
Sbjct: 235 VESCSITE 242




158|SequenceR|795|786|IHNLQSVESC

>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005

Query: 3   NLQSVESC 10
           NL+S+E C
Sbjct: 204 NLKSLEPC 211


>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3   NLQSVESC 10
           NL+S+E C
Sbjct: 204 NLKSLEPC 211


>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong

Query: 3   NLQSVESC 10
           NL+S+E C
Sbjct: 204 NLKSLEPC 211


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2   HNLQSVESC 10
           H L++V++C
Sbjct: 974 HGLRAVKTC 982


>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004

Query: 3   NLQSVESC 10
           NL+S+E C
Sbjct: 204 NLKSLEPC 211


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1    IHNLQSVESC 10
            +H  Q +E C
Sbjct: 1140 VHQAQFIEKC 1149


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1    IHNLQSVESC 10
            +H  Q +E C
Sbjct: 1139 VHQAQFIEKC 1148


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1    IHNLQSVESC 10
            +H  Q +E C
Sbjct: 1139 VHQAQFIEKC 1148


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1  IHNLQSVESC 10
          +HN+ + ++C
Sbjct: 64 VHNVWATQAC 73


>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  IHNLQSVESC 10
          +H+  + ESC
Sbjct: 37 LHDCAAFESC 46


>sp|PAX_I47A0|PROTEIN PA-X|Influenza A virus (strain A/Fort

Query: 3   NLQSVESC 10
           NL+S E C
Sbjct: 204 NLKSQEQC 211


>sp|PAX_I40A0|PROTEIN PA-X|Influenza A virus (strain A/Hickox/1940

Query: 3   NLQSVESC 10
           NL+S E C
Sbjct: 204 NLKSQEQC 211


>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  HNLQSVESC 10
          HN+ + ++C
Sbjct: 57 HNIWATQAC 65


>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2  HNLQSVESC 10
          HN+ + ++C
Sbjct: 55 HNIWATQAC 63




159|SequenceR|800|791|GHEEAIHNLQ

>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    HEEAIHNL 9
            HEE I+NL
Sbjct: 4474 HEETIYNL 4481


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2    HEEAIHNL 9
            HEE I+NL
Sbjct: 4451 HEETIYNL 4458


>sp|UL132_HCMVM|ENVELOPE glycoprotein UL132|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2  HEEAIHNLQ 10
          HE ++HN++
Sbjct: 66 HESSVHNVR 74


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1    GHEEAIH 7
            GHE+ IH
Sbjct: 2608 GHEKPIH 2614


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 2    HEEAIHNL 9
            HE++++NL
Sbjct: 4119 HEQSMYNL 4126


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2    HEEAIHNL 9
            HE++++NL
Sbjct: 4144 HEQSMYNL 4151


>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1   GHEEAIHNL 9
           GH   +HNL
Sbjct: 299 GHAVELHNL 307


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1   GHEEAIHNL 9
           GH   +HNL
Sbjct: 288 GHAVELHNL 296


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 2   HEEAIHN 8
           +EE++HN
Sbjct: 127 YEESLHN 133


>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6

Query: 2  HEEAIHNL 9
          H E IH L
Sbjct: 81 HNEKIHRL 88


>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2

Query: 2  HEEAIHNL 9
          H E IH L
Sbjct: 81 HNEKIHRL 88


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1   GHEEAIHNL 9
           GH   +HNL
Sbjct: 288 GHAVELHNL 296


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1   GHEEAIHNL 9
           GH   +HNL
Sbjct: 288 GHAVELHNL 296


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 3   EEAIHN 8
           EE++HN
Sbjct: 128 EESLHN 133


>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain

Query: 1   GHEEAIHNLQ 10
           GH ++I NL+
Sbjct: 408 GHTKSILNLR 417


>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51

Query: 1  GHEEAIHNLQ 10
           ++EA+H L+
Sbjct: 76 ANKEAVHQLK 85


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 1   GHEEAIHNL 9
           GH   +HNL
Sbjct: 288 GHALELHNL 296


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1   GHEEAIHNL 9
           GH    HNL
Sbjct: 288 GHAVEFHNL 296


>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate

Query: 1   GHEEAIHNLQ 10
           GH ++I NL+
Sbjct: 408 GHTKSILNLR 417


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1   GHEEAIHNL 9
           GH   +HN+
Sbjct: 299 GHAVELHNI 307


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1   GHEEAIHNL 9
           GH   +HN+
Sbjct: 299 GHAVELHNI 307


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1   GHEEAIHNL 9
           GH   +HN+
Sbjct: 299 GHAVELHNI 307


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1   GHEEAIHNL 9
           GH   +HN+
Sbjct: 299 GHAVELHNI 307




160|SequenceR|805|796|KIGNNGHEEA

>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1   KIGNNGHE 8
           K+GN+G+E
Sbjct: 267 KLGNDGYE 274


>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate

Query: 4   NNGHE 8
           NNGHE
Sbjct: 455 NNGHE 459


>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   GNNGHEEA 10
           GNN +EEA
Sbjct: 292 GNNLYEEA 299


>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   GNNGHEEA 10
           GNN +EEA
Sbjct: 292 GNNLYEEA 299


>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1711 VGGNGHQ 1717


>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1710 VGGNGHQ 1716


>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1712 VGGNGHQ 1718


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1710 VGGNGHQ 1716


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1713 VGGNGHQ 1719


>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1701 VGGNGHQ 1707


>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1702 VGGNGHQ 1708


>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1700 VGGNGHQ 1706


>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1700 VGGNGHQ 1706


>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1702 VGGNGHQ 1708


>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1702 VGGNGHQ 1708


>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1704 VGGNGHQ 1710


>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1699 VGGNGHQ 1705


>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1718 VGGNGHQ 1724


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1720 VGGNGHQ 1726


>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1708 VGGNGHQ 1714


>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

Query: 2    IGNNGHE 8
            +G NGH+
Sbjct: 1701 VGGNGHQ 1707


>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29

Query: 3   GNNGHE 8
           GNNG E
Sbjct: 279 GNNGRE 284


>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1   KIGNNGH 7
           KIG  GH
Sbjct: 221 KIGKKGH 227


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 3   GNNGHEE 9
           GN G EE
Sbjct: 177 GNGGQEE 183


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3   GNNGHEE 9
           GNN H E
Sbjct: 446 GNNTHNE 452


>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)

Query: 2   IGNNGHE 8
           +GN+G+E
Sbjct: 267 LGNDGYE 273


>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)

Query: 1   KIGNNGHEEA 10
           KIGN G  ++
Sbjct: 346 KIGNGGSNKS 355


>sp|BARF1_EBVG|SECRETED protein BARF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2   IGNNGHEEA 10
           +G N  EEA
Sbjct: 202 VGKNDKEEA 210


>sp|BARF1_EBVB9|SECRETED protein BARF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2   IGNNGHEEA 10
           +G N  EEA
Sbjct: 202 VGKNDKEEA 210


>sp|BARF1_EBVA8|SECRETED protein BARF1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2   IGNNGHEEA 10
           +G N  EEA
Sbjct: 202 VGKNDKEEA 210




161|SequenceR|810|801|LDVNPKIGNN

>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 1   LDVNPKIGNN 10
           L V P++GNN
Sbjct: 911 LFVEPRLGNN 920


>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89

Query: 2    DVNPKIGN 9
            DVN KIGN
Sbjct: 1366 DVNIKIGN 1373


Query: 1    LDVNPK 6
            LD+NP+
Sbjct: 1792 LDINPQ 1797


>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)

Query: 3   VNPKIGNN 10
           + PK+GNN
Sbjct: 344 MRPKLGNN 351


>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)

Query: 3   VNPKIGNN 10
           + PK+GNN
Sbjct: 344 MRPKLGNN 351


>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 3   VNPKIGNN 10
           + PK+GNN
Sbjct: 344 MRPKLGNN 351


>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain

Query: 4   NPKIGNN 10
           NP IGNN
Sbjct: 547 NPYIGNN 553


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2    DVNPKIGN 9
            DV+ KIGN
Sbjct: 1354 DVDSKIGN 1361


>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)

Query: 2    DVNPKIGN 9
            +VN KIGN
Sbjct: 1358 NVNTKIGN 1365


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 5    PKIGNN 10
            PKIG+N
Sbjct: 1703 PKIGSN 1708


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 5    PKIGNN 10
            PKIG+N
Sbjct: 1703 PKIGSN 1708


>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)

Query: 2    DVNPKIGN 9
            +VN KIGN
Sbjct: 1358 NVNTKIGN 1365


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LDVNPKI 7
           LDVNP +
Sbjct: 282 LDVNPDL 288


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LDVNPKI 7
           LDVNP +
Sbjct: 282 LDVNPDL 288


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 5    PKIGNN 10
            PK+G+N
Sbjct: 1703 PKVGSN 1708


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1    LDVNPKI 7
            +DV PKI
Sbjct: 1202 VDVKPKI 1208


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1    LDVNPKI 7
            +DV PKI
Sbjct: 1202 VDVKPKI 1208


>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   VNPKIGNN 10
           V P+IG+N
Sbjct: 451 VLPRIGSN 458


>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   VNPKIGNN 10
           V P+IG+N
Sbjct: 451 VLPRIGSN 458


>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 3   VNPKIGNN 10
           V P+IG+N
Sbjct: 451 VLPRIGSN 458


>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 2    DVNPKI 7
            D+NPK+
Sbjct: 1686 DLNPKV 1691


>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human

Query: 1   LDVNPKIGNN 10
           LD N  +G N
Sbjct: 415 LDTNESVGEN 424


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 1   LDVNPK 6
           +DVNP+
Sbjct: 634 IDVNPR 639


>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)

Query: 5   PKIGNN 10
           PK+GN+
Sbjct: 213 PKLGNS 218


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 1   LDVNPKIGNN 10
           LDV   I NN
Sbjct: 973 LDVTSPISNN 982


>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)

Query: 1    LDVNPK 6
            LD+NP+
Sbjct: 1781 LDINPQ 1786




162|SequenceR|815|806|ADGFYLDVNP

>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 1   ADGFYLDVNP 10
           ++GF+ DV P
Sbjct: 93  SEGFWTDVTP 102


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 624 DGFYVD 629


>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 625 DGFYID 630


>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 625 DGFYID 630


>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 625 DGFYID 630


>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 625 DGFYID 630


>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 625 DGFYID 630


>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate

Query: 2   DGFYLD 7
           DGFY+D
Sbjct: 625 DGFYID 630


>sp|VIF_HV2UC|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 4   FYLDVNP 10
           FY DV P
Sbjct: 96  FYTDVTP 102


>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 4   FYLDVNP 10
           FY DV P
Sbjct: 96  FYTDVTP 102


>sp|VIF_HV2D2|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 4   FYLDVNP 10
           FY DV P
Sbjct: 96  FYTDVTP 102


>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)

Query: 2  DGFYLDVNP 10
          D  YL+ NP
Sbjct: 31 DRLYLNTNP 39


>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)

Query: 2   DGFYLDVNP 10
           D  ++DVNP
Sbjct: 630 DTNFIDVNP 638


>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)

Query: 1   ADGFYLDVNP 10
           + GFY  V+P
Sbjct: 300 STGFYKTVHP 309


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2   DGFYLDVNP 10
           + FYL ++P
Sbjct: 130 EAFYLIIHP 138


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 2   DGFYLDVNP 10
           + FYL ++P
Sbjct: 130 EAFYLIIHP 138


>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   GFYLDVNP 10
           GFY  V P
Sbjct: 143 GFYARVTP 150


>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3   GFYLDVNP 10
           GFY  V P
Sbjct: 143 GFYARVTP 150


>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   GFYLDVNP 10
           GFY  V P
Sbjct: 143 GFYARVTP 150


>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3   GFYLDVNP 10
           GFY  V P
Sbjct: 143 GFYARVTP 150


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 2   DGFYLDVN 9
           +GFY D +
Sbjct: 187 EGFYYDAS 194


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2   DGFYLDVN 9
           +GFY D +
Sbjct: 187 EGFYYDAS 194


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2   DGFYLDVN 9
           +GFY D +
Sbjct: 187 EGFYYDAS 194


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 3   GFYLD 7
           GFY+D
Sbjct: 672 GFYID 676


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 3   GFYLD 7
           GFY+D
Sbjct: 672 GFYID 676




163|SequenceR|820|811|NTEKLADGFY

>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P

Query: 3   EKLADGFY 10
           +KLADGF+
Sbjct: 95  KKLADGFF 102


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2   TEKLADGFY 10
           T+K +DG Y
Sbjct: 375 TQKTSDGSY 383


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2   TEKLADGFY 10
           T+K +DG Y
Sbjct: 375 TQKTSDGSY 383


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2   TEKLADGFY 10
           T+K +DG Y
Sbjct: 375 TQKTSDGSY 383




164|SequenceR|825|816|HSHNNNTEKL

>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)

Query: 2   SHNNNTEK 9
           ++NNN+EK
Sbjct: 648 TYNNNSEK 655


>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)

Query: 1   HSHNNNT 7
           HS  NNT
Sbjct: 175 HSQTNNT 181


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1   HSHNNNT 7
           HS  NNT
Sbjct: 175 HSQTNNT 181


>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1

Query: 1   HSHNNN 6
           HSH NN
Sbjct: 480 HSHANN 485


>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 3   HNNNTEKL 10
           +NNNT  L
Sbjct: 97  YNNNTHDL 104


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 3   HNNNTEKL 10
           H NN E+L
Sbjct: 514 HWNNAERL 521


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 3   HNNNTEKL 10
           H NN E+L
Sbjct: 514 HWNNAERL 521


>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1

Query: 1  HSHNNNTE 8
          +SH NN E
Sbjct: 82 YSHKNNLE 89


>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB

Query: 3   HNNNTEKL 10
           H NN E+L
Sbjct: 234 HWNNAERL 241


>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep

Query: 3   HNNNTEKL 10
           H NN E+L
Sbjct: 234 HWNNAERL 241


>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)

Query: 3   HNNNTEKL 10
           H NN E+L
Sbjct: 234 HWNNVERL 241


>sp|HEMA_I57A4|HEMAGGLUTININ A virus (strain A/RI/5-/1957

Query: 4  NNNTEKL 10
          NN+TEK+
Sbjct: 25 NNSTEKV 31




165|SequenceR|830|821|LEMTQHSHNN

>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1   LEMTQHSH 8
           LE+T H H
Sbjct: 117 LELTDHRH 124


>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1   LEMTQHSH 8
           LE+T H H
Sbjct: 117 LELTDHRH 124


>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           LE+T HS N
Sbjct: 364 LEITTHSFN 372


>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           LE+T HS N
Sbjct: 365 LEITTHSFN 373


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           LE+T HS N
Sbjct: 367 LEITTHSFN 375


>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           LE+T HS N
Sbjct: 359 LEITMHSFN 367


>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           LE+T HS N
Sbjct: 365 LEITTHSFN 373


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           +E+T HS N
Sbjct: 370 VEITTHSFN 378


>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           +E+T HS N
Sbjct: 362 IEITTHSFN 370


>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1   LEMTQHSHN 9
           +E+T HS N
Sbjct: 366 VEITTHSFN 374


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 1   LEMTQHSHNN 10
           L +  HSH+N
Sbjct: 479 LFIESHSHDN 488


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1  LEMTQHSHNN 10
          +E+T++ H N
Sbjct: 51 MEITRYVHRN 60


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1  LEMTQHSHNN 10
          +E+T++ H N
Sbjct: 51 MEITRYVHRN 60


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3    MTQHSH 8
            +TQH+H
Sbjct: 1373 VTQHNH 1378




166|SequenceR|838|826|IETQIAVKLEMTQ

>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E TQ
Sbjct: 1735 IESQRIMKVEFTQ 1747


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E TQ
Sbjct: 1735 IESQRIMKVEFTQ 1747


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E TQ
Sbjct: 1735 IESQRIMKVEFTQ 1747


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E TQ
Sbjct: 1735 IESQRIMKVEFTQ 1747


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E TQ
Sbjct: 1735 IESQRIMKVEFTQ 1747


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E TQ
Sbjct: 1569 IESQRIMKVEFTQ 1581


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            +E+Q  +K+E TQ
Sbjct: 1736 VESQRIMKVEFTQ 1748


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            +E+Q  +K+E TQ
Sbjct: 1736 VESQRIMKVEFTQ 1748


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E +Q
Sbjct: 1735 IESQRIMKVEFSQ 1747


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1    IETQIAVKLEMTQ 13
            IE+Q  +K+E +Q
Sbjct: 1733 IESQRIMKVEFSQ 1745




THE END