1|Sequence|1|10|MQEQEIGFIS
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
QE+E+GF
Sbjct: 57 QEEEVGF 63
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
QE+E+GF
Sbjct: 57 QEEEVGF 63
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
QE+E+GF
Sbjct: 68 QEEEVGF 74
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+EZE+GF
Sbjct: 63 EEZEVGF 69
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 64 EEEEVGF 70
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 71 EEEEVGF 77
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 62 EEEEVGF 68
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 72 EEEEVGF 78
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 MQEQEIGFIS 10
++ QEI FIS
Sbjct: 402 LRYQEINFIS 411
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 QEQEIGF 8
+E+E+GF
Sbjct: 66 EEEEVGF 72
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 MQEQEIGFIS 10
++ QE+ FIS
Sbjct: 406 LRYQEVNFIS 415
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 EQEIGF 8
E+E+GF
Sbjct: 61 EEEVGF 66
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 EQEIGF 8
E+E+GF
Sbjct: 60 EEEVGF 65
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 EQEIGFIS 10
EQ+ GF+S
Sbjct: 46 EQDPGFVS 53
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 EQEIGFIS 10
EQ+ GF+S
Sbjct: 46 EQDPGFVS 53
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 3 EQEIGFIS 10
+ E+GFIS
Sbjct: 703 KDEMGFIS 710
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EQEIGFIS 10
+ E+GFIS
Sbjct: 707 KDEMGFIS 714
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 3 EQEIGFIS 10
+ E+GFIS
Sbjct: 707 KDEMGFIS 714
2|Sequence|6|15|IGFISKYNEG
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 GFISKYNEG 10
G+I YNEG
Sbjct: 469 GYIRYYNEG 477
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FISKYNEG 10
FIS++N G
Sbjct: 590 FISRFNSG 597
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FISKYNEG 10
FIS++N G
Sbjct: 590 FISRFNSG 597
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IGFISKYN 8
+GFI +YN
Sbjct: 115 LGFIPRYN 122
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 IGFISKY 7
+GF+S Y
Sbjct: 120 VGFVSSY 126
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 IGFISKY 7
+GF++KY
Sbjct: 378 LGFLAKY 384
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 IGFISKYN 8
+GF+ YN
Sbjct: 919 VGFVEAYN 926
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 IGFISKYN 8
+GF+ YN
Sbjct: 920 VGFVEAYN 927
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 IGFISKYN 8
+GF+ YN
Sbjct: 916 VGFVEAYN 923
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 IGFISKYN 8
+GF+ YN
Sbjct: 916 VGFVEAYN 923
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 GFISKYN 8
GF++ YN
Sbjct: 472 GFVNNYN 478
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 GFISKYNE 9
G+I YNE
Sbjct: 469 GYIRFYNE 476
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 GFISKYNE 9
G++ YNE
Sbjct: 469 GYVRYYNE 476
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 GFISKYNE 9
GF++KY +
Sbjct: 2144 GFLNKYKK 2151
>sp|US34_HCMVM|PROTEIN US34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FISKYNEG 10
F+S++N G
Sbjct: 136 FLSRFNVG 143
>sp|US34_HCMVA|PROTEIN US34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FISKYNEG 10
F+S++N G
Sbjct: 136 FLSRFNVG 143
3|Sequence|11|20|KYNEGLCVNT
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 YNEGLC 7
YN GLC
Sbjct: 229 YNTGLC 234
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 YNEGLC 7
YN GLC
Sbjct: 229 YNTGLC 234
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NEGLCV 8
N+GLCV
Sbjct: 486 NQGLCV 491
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NEGLCV 8
N+GLCV
Sbjct: 486 NQGLCV 491
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 157 YNRDICKNT 165
>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 162 YNRDICKNT 170
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 157 YNRDVCKNT 165
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 157 YNRDVCKNT 165
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 157 YNRDVCKNT 165
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 162 YNRDVCKNT 170
>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)
Query: 2 YNEGLCVNT 10
YN +C NT
Sbjct: 162 YNRDVCKNT 170
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 YNEGLCV 8
Y EG CV
Sbjct: 2069 YTEGQCV 2075
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 YNEGLC 7
Y EG+C
Sbjct: 836 YKEGIC 841
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 YNEGLCV 8
Y EG CV
Sbjct: 2069 YTEGSCV 2075
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 YNEGLC 7
Y EG+C
Sbjct: 827 YEEGIC 832
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EGLCVN 9
EGLCV+
Sbjct: 5961 EGLCVD 5966
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EGLCVN 9
EGLCV+
Sbjct: 5938 EGLCVD 5943
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 KYNEGLCVN 9
+YNE C N
Sbjct: 427 QYNERQCYN 435
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YNEGLCV 8
Y EG CV
Sbjct: 2069 YTEGPCV 2075
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 YNEGLCV 8
Y EG CV
Sbjct: 2069 YTEGPCV 2075
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 YNEGLC 7
Y EG+C
Sbjct: 827 YEEGVC 832
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 EGLCVNT 10
EG+C+ T
Sbjct: 2978 EGVCITT 2984
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 4 EGLCVN 9
EGLC N
Sbjct: 189 EGLCFN 194
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 2 YNEGLCVN 9
+N G+C N
Sbjct: 319 HNNGICWN 326
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 YNEGLCVN 9
+N G+C N
Sbjct: 317 HNNGICWN 324
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 YNEGLCVN 9
+N G+C N
Sbjct: 319 HNNGICWN 326
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 EGLCVNT 10
EG+C+ T
Sbjct: 2978 EGVCITT 2984
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NEGLCVN 9
+EG+C N
Sbjct: 2979 DEGICFN 2985
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 LCVNT 10
LC+NT
Sbjct: 642 LCINT 646
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 LCVNT 10
LC+NT
Sbjct: 642 LCINT 646
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 LCVNT 10
LC+NT
Sbjct: 642 LCINT 646
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 NEGLCVN 9
+EG+C N
Sbjct: 2979 DEGICFN 2985
4|Sequence|16|25|LCVNTDPVSI
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 LCVNTDP 7
LC +TDP
Sbjct: 370 LCASTDP 376
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 65 CVPTDP 70
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 63 CVPTDP 68
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 75 CVPTDP 80
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 79 CVPTDP 84
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCVNTDPVSI 10
+CVN+ VSI
Sbjct: 29 ICVNSTTVSI 38
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 70 CVPTDP 75
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 73 CVPTDP 78
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 70 CVPTDP 75
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 70 CVPTDP 75
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 70 CVPTDP 75
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 74 CVPTDP 79
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 CVNTDP 7
CV TDP
Sbjct: 75 CVPTDP 80
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 LCVNTDPV 8
LC N DP+
Sbjct: 297 LCQNYDPL 304
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 LCVNTDPV 8
LC N DP+
Sbjct: 297 LCQNYDPL 304
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 LCVNTD 6
LCV+TD
Sbjct: 344 LCVSTD 349
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CVNTDPVSI 10
C++ DP+++
Sbjct: 24 CLHLDPLTV 32
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CVNTDPVSI 10
C++ DP+++
Sbjct: 24 CLHLDPLTV 32
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CVNTDPVSI 10
C++ DP+++
Sbjct: 24 CLHLDPLTV 32
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 LCVNTDPV 8
+CVNT+ V
Sbjct: 112 ICVNTECV 119
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 CVNTDP 7
C+++DP
Sbjct: 1249 CISSDP 1254
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 LCVNTDPV 8
+C+ DPV
Sbjct: 313 ICILRDPV 320
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 LCVNTDPV 8
+C+ DPV
Sbjct: 313 ICILRDPV 320
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 LCVNTDPVS 9
LC++ PV+
Sbjct: 276 LCIHGSPVN 284
5|Sequence|21|30|DPVSILTSIL
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 VSILTSIL 10
VS+LTS+L
Sbjct: 2174 VSVLTSML 2181
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 VSILTSIL 10
VS+LTS+L
Sbjct: 2174 VSVLTSML 2181
>sp|SPI1_VARV|SERINE proteinase inhibitor 1|Variola virus
Query: 2 PVSILTSI 9
PVSIL+++
Sbjct: 35 PVSILSTL 42
>sp|SPI1_VAR67|SERINE proteinase inhibitor 1|Variola virus (isolate
Query: 2 PVSILTSI 9
PVSIL+++
Sbjct: 35 PVSILSTL 42
6|Sequence|26|35|LTSILDMSLH
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TSILDMSLH 10
T +LD+S+H
Sbjct: 875 TEVLDLSIH 883
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TSILDMSLH 10
T +LD+S+H
Sbjct: 884 TEVLDLSIH 892
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TSILDMSLH 10
T +LD+S+H
Sbjct: 865 TEVLDLSIH 873
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TSILDMSLH 10
TS LD+ LH
Sbjct: 2267 TSYLDVDLH 2275
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TSILDMSLH 10
TS LD+ LH
Sbjct: 2267 TSYLDVDLH 2275
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TSILDMSLH 10
TS LD+ LH
Sbjct: 2267 TSYLDVDLH 2275
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TSILDMSLH 10
TS LD+ LH
Sbjct: 2267 TSYLDVDLH 2275
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 TSILDMSLH 10
TS LD+ LH
Sbjct: 2267 TSYLDVDLH 2275
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 LDMSLH 10
LD+SLH
Sbjct: 694 LDLSLH 699
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LDMSLH 10
LD+SLH
Sbjct: 729 LDLSLH 734
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LDMSLH 10
LD+SLH
Sbjct: 756 LDLSLH 761
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 SILDMSLH 10
+ILD+ LH
Sbjct: 2271 TILDVDLH 2278
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 5 LDMSLH 10
LDM LH
Sbjct: 11 LDMELH 16
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 5 LDMSLH 10
LDM LH
Sbjct: 11 LDMELH 16
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 LTSILDMSLH 10
++ +LD +LH
Sbjct: 1518 ISDVLDSALH 1527
>sp|VE4_HPV18|PROTEIN E4|Human papillomavirus type 18
Query: 2 TSILDMSLH 10
+SI+D+S H
Sbjct: 57 SSIVDLSTH 65
7|Sequence|31|40|DMSLHRQMGS
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 MSLHRQM 8
+SLHRQ+
Sbjct: 153 ISLHRQL 159
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 2 MSLHRQMG 9
+ LHR MG
Sbjct: 46 VKLHRHMG 53
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 DMSLHRQMGS 10
D S+H Q+G+
Sbjct: 815 DASVHGQIGA 824
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DMSLHRQ 7
D+SLHR
Sbjct: 4736 DVSLHRH 4742
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 1 DMSLHRQ 7
D+SLH Q
Sbjct: 71 DLSLHHQ 77
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 DMSLHRQ 7
D+SL+RQ
Sbjct: 1065 DISLYRQ 1071
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 DMSLHRQ 7
D+SL+RQ
Sbjct: 1065 DISLYRQ 1071
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 4 LHRQMGS 10
LH Q+GS
Sbjct: 1167 LHYQLGS 1173
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 4 LHRQM 8
LHRQM
Sbjct: 249 LHRQM 253
8|Sequence|36|45|RQMGSDRDLQ
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 QMGSDRDL 9
Q+GS+R+L
Sbjct: 1113 QVGSNREL 1120
>sp|REV_HV1S3|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 RQMGSDRDL 9
R GSDR+L
Sbjct: 4 RSGGSDREL 12
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 QMGSDRDL 9
Q+GS+R+L
Sbjct: 1127 QVGSNREL 1134
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 QMGSDRDL 9
Q+GS+R+L
Sbjct: 1124 QVGSNREL 1131
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 QMGSDRDL 9
Q+GS+R+L
Sbjct: 1123 QVGSNREL 1130
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 QMGSDRDL 9
Q+GS+R+L
Sbjct: 1123 QVGSNREL 1130
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GSDRDL 9
G DRDL
Sbjct: 486 GEDRDL 491
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 QMGSDRDL 9
Q+G RDL
Sbjct: 2363 QLGGSRDL 2370
9|Sequence|41|50|DRDLQSSASS
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDLQSSASS 10
R+L++SASS
Sbjct: 802 RELKNSASS 810
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RDLQSSASS 10
R+L++SASS
Sbjct: 804 RELRNSASS 812
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 DRDLQSSAS 9
D LQSSAS
Sbjct: 686 DFSLQSSAS 694
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 1 DRDLQSSASS 10
+RDLQS S
Sbjct: 231 ERDLQSKIGS 240
>sp|F13_MCV2|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 2
Query: 1 DRDLQSSASS 10
+RD QSS SS
Sbjct: 362 ERDWQSSFSS 371
>sp|F13_MCV1|ENVELOPE protein F13 homolog|Molluscum contagiosum virus subtype 1
Query: 1 DRDLQSSASS 10
+RD QSS SS
Sbjct: 362 ERDWQSSFSS 371
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 1 DRDLQSSASS 10
+RDLQS S
Sbjct: 231 ERDLQSKIGS 240
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 1 DRDLQSSASS 10
+RDLQS S
Sbjct: 231 ERDLQSKIGS 240
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 1 DRDLQSSASS 10
+RDLQS S
Sbjct: 231 ERDLQSKIGS 240
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 DLQSSAS 9
DL+SSAS
Sbjct: 1911 DLESSAS 1917
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 DLQSSAS 9
DL+SSAS
Sbjct: 1911 DLESSAS 1917
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 1 DRDLQSSASS 10
+RDLQS S
Sbjct: 231 ERDLQSKIGS 240
10|Sequence|46|55|SSASSVSLPS
>sp|UL124_HCMVM|UNCHARACTERIZED protein UL124|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SSASSVSLPS 10
SSA+++SLPS
Sbjct: 53 SSAAALSLPS 62
11|Sequence|51|60|VSLPSVKKAP
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 VSLPSVKKAP 10
V LP +KAP
Sbjct: 1922 VQLPPKEKAP 1931
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 VSLPSVKKA 9
VSLP+V+++
Sbjct: 270 VSLPTVERS 278
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 LPSVKK 8
LPSVKK
Sbjct: 163 LPSVKK 168
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 VSLPSVKKA 9
VS+P ++KA
Sbjct: 1275 VSMPVIRKA 1283
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 LPSVKK 8
LPSVKK
Sbjct: 163 LPSVKK 168
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 LPSVKK 8
LPSVKK
Sbjct: 163 LPSVKK 168
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 LPSVKK 8
LPSVKK
Sbjct: 163 LPSVKK 168
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 LPSVKK 8
LPSVKK
Sbjct: 163 LPSVKK 168
>sp|DR5_HHV6U|UNCHARACTERIZED protein DR5|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LPSVKKA 9
LP+V+KA
Sbjct: 114 LPAVRKA 120
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LPSVKKAP 10
LPS+ K P
Sbjct: 163 LPSLMKTP 170
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LPSVKKAP 10
LPS+ K P
Sbjct: 163 LPSLMKTP 170
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LPSVKKAP 10
LPS+ K P
Sbjct: 163 LPSLMKTP 170
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LPSVKKAP 10
LPS+ K P
Sbjct: 163 LPSLMKTP 170
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LPSVKKAP 10
LPS+ K P
Sbjct: 163 LPSLMKTP 170
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 3 LPSVKKAP 10
LPS+ K P
Sbjct: 163 LPSLMKTP 170
12|Sequence|56|65|VKKAPKKRRI
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 KKAPKKRR 9
KK P+KRR
Sbjct: 282 KKTPEKRR 289
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 KKAPKKRR 9
KK P+KRR
Sbjct: 282 KKTPEKRR 289
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 5 PKKRRI 10
PKKRR+
Sbjct: 660 PKKRRV 665
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 KKAPKKRR 9
KK P+KRR
Sbjct: 282 KKTPEKRR 289
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 VKKAPKKRR 9
V + PKKRR
Sbjct: 332 VPELPKKRR 340
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 5 PKKRRI 10
PK+RRI
Sbjct: 498 PKRRRI 503
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 5 PKKRRI 10
PKKRR+
Sbjct: 660 PKKRRL 665
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 VKKAPKKRR 9
+++AP+KR+
Sbjct: 259 LERAPQKRK 267
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 4 APKKRRI 10
APKK+R+
Sbjct: 591 APKKKRL 597
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 VKKAPKKRRI 10
+KKA KRR+
Sbjct: 570 IKKANIKRRL 579
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 APKKRR 9
AP+KRR
Sbjct: 1783 APRKRR 1788
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 APKKRR 9
AP+KRR
Sbjct: 1783 APRKRR 1788
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 KKAPKKRRI 10
+KAPK+ R+
Sbjct: 369 RKAPKRIRL 377
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 KKAPKKRRI 10
+KAPK+ R+
Sbjct: 369 RKAPKRIRL 377
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 KKAPKKRRI 10
+KAPK+ R+
Sbjct: 368 RKAPKRIRL 376
13|Sequence|61|70|KKRRISIGSL
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 KKRRISIGS 9
KKRR+S GS
Sbjct: 319 KKRRVSRGS 327
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 KKRRISIGS 9
KKRR+S GS
Sbjct: 319 KKRRVSRGS 327
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 3 RRISIGS 9
RR+S+GS
Sbjct: 373 RRVSVGS 379
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 3 RRISIGS 9
RR+S+GS
Sbjct: 373 RRVSVGS 379
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 KKRRISIG 8
+KR++SIG
Sbjct: 409 EKRKMSIG 416
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KKRRISI 7
KK+RISI
Sbjct: 713 KKKRISI 719
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 KRRISIG 8
+RR+SIG
Sbjct: 306 RRRLSIG 312
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 514 EKRAVGIGAL 523
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 509 EKRAVGIGAL 518
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 507 EKRAVGIGAL 516
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 509 EKRAVGIGAL 518
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 509 EKRAVGIGAL 518
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 504 EKRAVGIGAL 513
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 501 EKRAVGIGAL 510
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 509 EKRAVGIGAL 518
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 KKRRISIGSL 10
+KR + IG+L
Sbjct: 504 EKRAVGIGAL 513
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 KKRRISIGSL 10
K+R +S+G +
Sbjct: 619 KERELSVGRM 628
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 KKRRISIGSL 10
K+R +S+G +
Sbjct: 619 KERELSVGRM 628
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 KKRRISIGSL 10
K+R +S+G +
Sbjct: 619 KERELSVGRM 628
14|Sequence|66|75|SIGSLFRRKK
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 LFRRKK 10
LFRRKK
Sbjct: 6791 LFRRKK 6796
>sp|VGPCR_HHV8P|VIRAL G-protein coupled receptor|Human herpesvirus 8 type P
Query: 2 IGSLFRRK 9
+GSLFR++
Sbjct: 317 LGSLFRQR 324
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 IGSLFRR 8
+GS++RR
Sbjct: 260 VGSIYRR 266
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 IGSLFRR 8
+GS++RR
Sbjct: 260 VGSIYRR 266
15|Sequence|71|80|FRRKKDNKRK
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 FRRKKDNKRK 10
F++ KDNK +
Sbjct: 644 FKKNKDNKHE 653
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 FRRKKDNKRK 10
F R KDN +K
Sbjct: 533 FNRAKDNIKK 542
16|Sequence|76|85|DNKRKSRELN
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 NKRKSR 7
NKRKS+
Sbjct: 640 NKRKSK 645
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 NKRKSREL 9
NKRK++E+
Sbjct: 361 NKRKTKEV 368
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 2 NKRKSREL 9
NKRK++E+
Sbjct: 361 NKRKTKEV 368
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 2 NKRKSREL 9
NKRK++E+
Sbjct: 361 NKRKTKEV 368
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 NKRKSRELN 10
NK +S ELN
Sbjct: 757 NKEESTELN 765
17|Sequence|81|90|SRELNGGVDG
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SRELNGG 7
+RELNGG
Sbjct: 174 TRELNGG 180
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SRELNGG 7
+RELNGG
Sbjct: 174 TRELNGG 180
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 RELNGG 7
RELNGG
Sbjct: 175 RELNGG 180
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 RELNGG 7
RELNGG
Sbjct: 175 RELNGG 180
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 2 RELNGGV 8
RE+ GGV
Sbjct: 315 REMRGGV 321
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SRELNGGV 8
SRE GGV
Sbjct: 634 SREAAGGV 641
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SRELNGGV 8
SRE GGV
Sbjct: 634 SREAAGGV 641
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 4 LNGGVD 9
L+GGVD
Sbjct: 394 LSGGVD 399
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 4 LNGGVDG 10
+ GG+DG
Sbjct: 264 VRGGIDG 270
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 NGGVDG 10
N G+DG
Sbjct: 1865 NSGIDG 1870
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 NGGVDG 10
N G+DG
Sbjct: 1865 NSGIDG 1870
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 4 LNGGVD 9
L+GGVD
Sbjct: 395 LSGGVD 400
18|Sequence|86|95|GGVDGIASIE
>sp|B6_HHV6Z|PROTEIN B6|Human herpesvirus 6B (strain Z29)
Query: 1 GGVDGIASI 9
GG+DG+ SI
Sbjct: 50 GGLDGVLSI 58
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 GVDGIASI 9
GV+GIA I
Sbjct: 863 GVEGIAKI 870
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 3 VDGIASIE 10
+DG+ SIE
Sbjct: 207 IDGLESIE 214
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 3 VDGIASIE 10
+DG+ SIE
Sbjct: 204 IDGLESIE 211
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 3 VDGIASIE 10
+DG+ SIE
Sbjct: 84 IDGLESIE 91
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 1 GGVDGIA 7
GGV GIA
Sbjct: 140 GGVGGIA 146
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 2 GVDGIASI 9
G DG AS+
Sbjct: 208 GTDGAASV 215
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 GGVDGIA 7
GGV+GI+
Sbjct: 3017 GGVEGIS 3023
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GGVDGIA 7
GGV+GI+
Sbjct: 3017 GGVEGIS 3023
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 GVDGIASIE 10
G DG S+E
Sbjct: 4184 GKDGFVSVE 4192
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 GVDGIASIE 10
G DG S+E
Sbjct: 4184 GKDGFVSVE 4192
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 VDGIASIE 10
VDG+ S+E
Sbjct: 27 VDGLLSLE 34
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3012 GGVEGIG 3018
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3012 GGVEGIG 3018
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3012 GGVEGIG 3018
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3012 GGVEGIG 3018
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3012 GGVEGIG 3018
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 95 GGLDGL 100
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 95 GGLDGL 100
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 96 GGLDGL 101
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 93 GGLDGL 98
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 92 GGLDGL 97
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 97 GGLDGL 102
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 100 GGLDGL 105
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 97 GGLDGL 102
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 98 GGLDGL 103
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 96 GGLDGL 101
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 95 GGLDGL 100
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 104 GGLDGL 109
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3012 GGVEGIG 3018
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 GGVDGIA 7
GGV+GI
Sbjct: 3013 GGVEGIG 3019
>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 GGVDGI 6
GG+DG+
Sbjct: 96 GGLDGL 101
19|Sequence|91|100|IASIESIHSE
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ASIESIHSE 10
+SIESIH +
Sbjct: 424 SSIESIHED 432
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 IASIESIHSE 10
IASI+ H E
Sbjct: 26 IASIQKRHQE 35
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 IASIESIHSE 10
IASI+ H E
Sbjct: 26 IASIQKRHQE 35
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 ASIESIHSE 10
+SIESIH +
Sbjct: 442 SSIESIHED 450
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 IASIESIH 8
+ASIE IH
Sbjct: 532 LASIEWIH 539
20|Sequence|96|105|SIHSEMCTDK
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IHSEMCTD 9
IH++ CTD
Sbjct: 353 IHNKRCTD 360
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IHSEMCTD 9
IH++ CTD
Sbjct: 353 IHNKRCTD 360
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 EMCTDK 10
+MCTDK
Sbjct: 583 KMCTDK 588
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 SIHSEMCTDK 10
SIHS TD+
Sbjct: 6781 SIHSYFITDQ 6790
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 SIHSEMCTDK 10
SIHS TD+
Sbjct: 6761 SIHSYFITDQ 6770
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 SIHSEMCTDK 10
SIHS TD+
Sbjct: 6811 SIHSYFITDQ 6820
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 SIHSEMCTDK 10
SIHS TD+
Sbjct: 6724 SIHSYFITDE 6733
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SIHSEM 6
+IHSEM
Sbjct: 102 NIHSEM 107
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 1 SIHSEM 6
+IHSEM
Sbjct: 102 NIHSEM 107
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 SIHSEMC 7
++H E+C
Sbjct: 135 TVHMELC 141
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 SIHSEMC 7
++H E+C
Sbjct: 135 TVHMELC 141
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 SIHSEMC 7
++H E+C
Sbjct: 135 TVHMELC 141
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 SIHSEM 6
+IHSEM
Sbjct: 106 NIHSEM 111
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 EMCTDK 10
++CTDK
Sbjct: 583 KICTDK 588
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 HSEMC 7
H EMC
Sbjct: 4365 HDEMC 4369
21|Sequence|101|110|MCTDKNSIFS
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 DKNSIFS 10
DKN+IFS
Sbjct: 409 DKNAIFS 415
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 KNSIFS 10
KNSIFS
Sbjct: 519 KNSIFS 524
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 KNSIFS 10
KNSIFS
Sbjct: 519 KNSIFS 524
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 1 MCTDKNSIFS 10
+CT NSI+S
Sbjct: 256 LCTLLNSIYS 265
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 3 TDKNSIFS 10
TD NSI S
Sbjct: 210 TDNNSIVS 217
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 DKNSIFS 10
++NS+FS
Sbjct: 1557 ERNSVFS 1563
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 DKNSIFS 10
++NS+FS
Sbjct: 1555 ERNSVFS 1561
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 DKNSIFS 10
DK++IFS
Sbjct: 409 DKSAIFS 415
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 TDKNSIFS 10
T KN++FS
Sbjct: 140 TGKNNLFS 147
22|Sequence|106|115|NSIFSTNTSS
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 IFSTNTSS 10
+FS NTSS
Sbjct: 17 VFSENTSS 24
23|Sequence|111|120|TNTSSDNGLT
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 NTSSDNGLT 10
T+SD+GLT
Sbjct: 2393 KTTSDDGLT 2401
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 NTSSDNGLT 10
T+SD+GLT
Sbjct: 2305 KTTSDDGLT 2313
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 NTSSDN 7
NTS+DN
Sbjct: 2083 NTSADN 2088
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 TNTSSDNG 8
TNT+S NG
Sbjct: 138 TNTNSSNG 145
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 6 DNGLT 10
DNGLT
Sbjct: 517 DNGLT 521
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TNTSSD 6
TNT+SD
Sbjct: 339 TNTTSD 344
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 NTSSDNG 8
NTSS NG
Sbjct: 80 NTSSGNG 86
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 1 TNTSSDN 7
TNT SDN
Sbjct: 422 TNTKSDN 428
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 1 TNTSSDN 7
TNT SDN
Sbjct: 422 TNTKSDN 428
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TNTSSDN 7
TNT SDN
Sbjct: 422 TNTKSDN 428
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TNTSSDN 7
TNT SDN
Sbjct: 422 TNTKSDN 428
24|Sequence|116|125|DNGLTSISKQ
>sp|NSP1A_ROTGI|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate RVB/Rat/United
Query: 1 DNGLTSISKQ 10
+NG+ SISK+
Sbjct: 72 ENGIQSISKR 81
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 1 DNGLTSI 7
DNG TSI
Sbjct: 304 DNGFTSI 310
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 1 DNGLTSI 7
DNG TSI
Sbjct: 304 DNGFTSI 310
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 NGLTSI 7
NGLTSI
Sbjct: 1662 NGLTSI 1667
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 NGLTSI 7
NGLTSI
Sbjct: 1662 NGLTSI 1667
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 1 DNGLTSISKQ 10
DNG ISK+
Sbjct: 309 DNGDNEISKE 318
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NGLTSIS 8
NG TS+S
Sbjct: 3176 NGYTSVS 3182
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 NGLTSIS 8
NG TS+S
Sbjct: 3176 NGYTSVS 3182
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GLTSISK 9
GLTS+S+
Sbjct: 819 GLTSVSE 825
25|Sequence|121|130|SISKQIGDFI
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 SISKQIGDFI 10
SISK D+I
Sbjct: 560 SISKHYNDYI 569
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 SISKQIGDFI 10
SISK D+I
Sbjct: 560 SISKHYNDYI 569
>sp|HEMA_VAR67|PROTEIN OPG185|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 ISKQIGD 8
ISK+IGD
Sbjct: 24 ISKKIGD 30
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 QIGDFI 10
QIG+FI
Sbjct: 5164 QIGEFI 5169
26|Sequence|126|135|IGDFIECPLC
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 IGDFIEC--PLC 10
+ DFI+C PLC
Sbjct: 451 VDDFIDCIPPLC 462
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 3 DFIECPLC 10
DFI+C LC
Sbjct: 324 DFIKCNLC 331
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GDFIECP 8
GDF+ CP
Sbjct: 4282 GDFVLCP 4288
Query: 1 IGDFIECP 8
+GD + CP
Sbjct: 2997 LGDIVYCP 3004
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 5 IECPLC 10
++CPLC
Sbjct: 52 VQCPLC 57
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 6 ECPLC 10
ECP+C
Sbjct: 283 ECPMC 287
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GDFIECPLC 10
GDFI LC
Sbjct: 65 GDFINIRLC 73
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 2 GDFIECPLC 10
GDFI LC
Sbjct: 59 GDFINIRLC 67
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 GDFIECPLC 10
GDFI LC
Sbjct: 64 GDFINIRLC 72
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GDFIECPLC 10
GDFI LC
Sbjct: 64 GDFINIRLC 72
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 FIECPLC 10
F ECP C
Sbjct: 16 FEECPKC 22
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 4 FIECPLC 10
F ECP C
Sbjct: 16 FEECPKC 22
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 4 FIECPLC 10
F ECP C
Sbjct: 16 FEECPKC 22
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 4 FIECPLC 10
F ECP C
Sbjct: 16 FEECPKC 22
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IGDFIECPL 9
+GDFI+ P
Sbjct: 6640 LGDFIQGPF 6648
Query: 1 IGDFIECP 8
+GD + CP
Sbjct: 2971 LGDTVTCP 2978
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 IGDFIECP 8
+GD + CP
Sbjct: 2997 LGDIVYCP 3004
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 IGDFIECPL 9
+GD +CP+
Sbjct: 360 LGDVSKCPV 368
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 IGDFIECP 8
+GD + CP
Sbjct: 2971 LGDTVTCP 2978
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 2 GDFIEC 7
G F+EC
Sbjct: 192 GTFVEC 197
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 2 GDFIEC 7
G F+EC
Sbjct: 192 GTFVEC 197
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 IECPLC 10
+EC LC
Sbjct: 1234 MECQLC 1239
>sp|NS2_HRSVB|NON-STRUCTURAL protein 2|Human respiratory syncytial virus B
Query: 2 GDFIEC 7
G F+EC
Sbjct: 100 GGFLEC 105
>sp|VE7_HPV56|PROTEIN E7|Human papillomavirus 56
Query: 5 IECPLC 10
+ CPLC
Sbjct: 96 VTCPLC 101
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 2 GDFIEC 7
GD I+C
Sbjct: 356 GDLIDC 361
27|Sequence|131|140|ECPLCLLRHS
>sp|VE7_HPV63|PROTEIN E7|Human papillomavirus type 63
Query: 2 CPLCLLRHS 10
CPLC +RH
Sbjct: 78 CPLCAIRHQ 86
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 CPLCLLRH 9
CP+ L+RH
Sbjct: 1813 CPIYLVRH 1820
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 ECPLCLLRH 9
E +CLL+H
Sbjct: 283 ESSICLLKH 291
>sp|TAT_HV1MP|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CPLCLLR 8
CPLC ++
Sbjct: 34 CPLCFMK 40
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CPLC 5
CPLC
Sbjct: 386 CPLC 389
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 CPLC 5
CPLC
Sbjct: 11 CPLC 14
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CPLC 5
CPLC
Sbjct: 386 CPLC 389
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CPLC 5
CPLC
Sbjct: 386 CPLC 389
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CPLC 5
CPLC
Sbjct: 386 CPLC 389
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CPLC 5
CPLC
Sbjct: 386 CPLC 389
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CPLC 5
CPLC
Sbjct: 386 CPLC 389
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 1 ECPLC 5
+CPLC
Sbjct: 53 QCPLC 57
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PLCLLRHS 10
PLC + HS
Sbjct: 432 PLCAINHS 439
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 5 CLLRHS 10
CL+RHS
Sbjct: 227 CLIRHS 232
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 3 PLCLLRH 9
PLC RH
Sbjct: 279 PLCKGRH 285
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 5 CLLRHS 10
CL+RHS
Sbjct: 227 CLIRHS 232
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 CPLCLLRH 9
CP L RH
Sbjct: 562 CPTVLYRH 569
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 CPLCLLRH 9
CP L RH
Sbjct: 562 CPTVLYRH 569
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CPLCLLRH 9
CP L RH
Sbjct: 1898 CPAILRRH 1905
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 CPLCL 6
CP CL
Sbjct: 66 CPKCL 70
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 CPLCL 6
CP CL
Sbjct: 69 CPKCL 73
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 CPLCL 6
CP CL
Sbjct: 69 CPKCL 73
>sp|VE7_HPV1|PROTEIN E7|Human papillomavirus type 1 (Human
Query: 2 CPLCLLRHS 10
CPLC L+
Sbjct: 85 CPLCTLQRQ 93
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 CPLCL 6
CP CL
Sbjct: 62 CPKCL 66
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 CPLCL 6
CP CL
Sbjct: 62 CPKCL 66
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 CPLCL 6
CP CL
Sbjct: 69 CPKCL 73
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 ECPLCL 6
+CP CL
Sbjct: 574 QCPYCL 579
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 69 CPKCL 73
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 CPLCL 6
CP CL
Sbjct: 69 CPKCL 73
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 2 CPLCL 6
CP CL
Sbjct: 61 CPKCL 65
>sp|VE7_HPV30|PROTEIN E7|Human papillomavirus 30
Query: 2 CPLCLLR 8
CPLC R
Sbjct: 98 CPLCATR 104
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
>sp|VE7_HPV53|PROTEIN E7|Human papillomavirus type 53
Query: 2 CPLCLLR 8
CPLC R
Sbjct: 98 CPLCATR 104
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 2 CPLCL 6
CP CL
Sbjct: 54 CPKCL 58
28|Sequence|136|145|LLRHSKDRFP
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 LLRHSKDRF 9
L RHSK+ F
Sbjct: 620 LQRHSKEMF 628
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 HSKDRFP 10
H K RFP
Sbjct: 777 HVKGRFP 783
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 LLRHSKDRF 9
L RH +RF
Sbjct: 287 LARHMSERF 295
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 LLRHSKDRFP 10
+LR + RFP
Sbjct: 453 ILRRRRKRFP 462
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 LLRHSKDRFP 10
+LR + RFP
Sbjct: 448 ILRRRRKRFP 457
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 RHSKDRFP 10
R +KD FP
Sbjct: 462 RSAKDTFP 469
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLRHSKD 7
L+RHS D
Sbjct: 310 LMRHSPD 316
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLRHSKD 7
L+RHS D
Sbjct: 310 LMRHSPD 316
29|Sequence|141|150|KDRFPDIMTC
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KDRFPDIMT 9
+DRFP +M+
Sbjct: 473 RDRFPPVMS 481
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KDRFPDIMT 9
+DRFP +M+
Sbjct: 473 RDRFPPVMS 481
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KDRFPDIMT 9
+DRFP +M+
Sbjct: 473 RDRFPPVMS 481
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 KDRFPDIMT 9
KDRFP +++
Sbjct: 476 KDRFPPVLS 484
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 DRFPDIMT 9
D PDIMT
Sbjct: 653 DTLPDIMT 660
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 RFPDIMT 9
+FPD++T
Sbjct: 150 KFPDVLT 156
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 RFPDIMT 9
+FPD++T
Sbjct: 150 KFPDVLT 156
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 RFPDIMT 9
+FPD++T
Sbjct: 150 KFPDVLT 156
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 RFPDIMT 9
+FPD++T
Sbjct: 150 KFPDVLT 156
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 1 KDRFPDIMT 9
K+RFP MT
Sbjct: 49 KERFPKRMT 57
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 RFPDIMT 9
+FPD++T
Sbjct: 150 KFPDVLT 156
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 DRFPDIMTC 10
++FP +TC
Sbjct: 605 EKFPTTVTC 613
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 DRFPDIMTC 10
+RF D ++C
Sbjct: 3389 ERFKDYLSC 3397
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 DRFPDIMTC 10
+RF D ++C
Sbjct: 3389 ERFKDYLSC 3397
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 DRFPDIMTC 10
++FP +TC
Sbjct: 605 EKFPTTVTC 613
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 RFPDIMT 9
R+P+IMT
Sbjct: 2167 RWPEIMT 2173
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 KDRFPDI 7
K RFP+I
Sbjct: 146 KQRFPNI 152
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 125 PDVATC 130
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PDIMT 9
PDIMT
Sbjct: 145 PDIMT 149
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KDRFPDI 7
+DRFP +
Sbjct: 829 RDRFPGL 835
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KDRFPDI 7
+DRFP +
Sbjct: 829 RDRFPGL 835
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KDRFPDI 7
+DRFP +
Sbjct: 829 RDRFPGL 835
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 KDRFPDIMTC 10
+++F D ++C
Sbjct: 3386 QEKFKDYLSC 3395
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 KDRFPDI 7
++RFP+I
Sbjct: 123 RERFPNI 129
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KDRFPDI 7
++RFP+I
Sbjct: 123 RERFPNI 129
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 FPDIMTC 10
FP +++C
Sbjct: 366 FPSVVSC 372
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 5 PDIMTC 10
PD+ TC
Sbjct: 141 PDVRTC 146
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DRFPDI 7
D FPD+
Sbjct: 932 DEFPDL 937
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DRFPDI 7
D FPD+
Sbjct: 923 DEFPDL 928
30|Sequence|146|155|DIMTCHHRSC
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 TCHHR 8
TCHH+
Sbjct: 202 TCHHK 206
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 TCHHR 8
TCHH+
Sbjct: 202 TCHHK 206
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 TCHHR 8
TCHH+
Sbjct: 202 TCHHK 206
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 1 DIMTCHHRSC 10
D C HR C
Sbjct: 130 DTFPCMHRFC 139
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 1 DIMTCHHRSC 10
DI+T H+ +C
Sbjct: 165 DILTTHNGTC 174
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 MTCHH 7
M CHH
Sbjct: 139 MWCHH 143
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 MTCHH 7
M CHH
Sbjct: 139 MWCHH 143
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 MTCHH 7
M CHH
Sbjct: 139 MWCHH 143
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 MTCHH 7
M CHH
Sbjct: 139 MWCHH 143
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 TCHHRSC 10
TC +R C
Sbjct: 2715 TCGYRRC 2721
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 TCHHRSC 10
TC +R C
Sbjct: 2715 TCGYRRC 2721
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 MTCHHRSC 10
M CH + C
Sbjct: 1048 MCCHDKKC 1055
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 TCHHRSC 10
TC+ R C
Sbjct: 188 TCYMRHC 194
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 TCHHRSC 10
TC+ R C
Sbjct: 199 TCYMRHC 205
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 IMTCHHRSC 10
I TC R+C
Sbjct: 241 ISTCTIRNC 249
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 TCHHR 8
TCH R
Sbjct: 185 TCHRR 189
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 TCHHR 8
TCH R
Sbjct: 185 TCHRR 189
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 MTCHHR 8
+T HHR
Sbjct: 220 LTSHHR 225
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 MTCHHR 8
+T HHR
Sbjct: 221 LTSHHR 226
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 4 TCHHRSC 10
TC+ +SC
Sbjct: 80 TCNKKSC 86
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 TCHHR 8
TCH R
Sbjct: 185 TCHRR 189
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 IMTCHHRSC 10
I+TC SC
Sbjct: 393 IVTCVKASC 401
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 IMTCHHRSC 10
I+TC SC
Sbjct: 393 IVTCVKASC 401
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DIMTCHHRS 9
+ +TCH+++
Sbjct: 857 EYITCHYKT 865
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DIMTCHHRS 9
+ +TCH+++
Sbjct: 857 EYVTCHYKT 865
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DIMTCHHRS 9
+ +TCH+++
Sbjct: 857 EYVTCHYKT 865
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DIMTCHHRS 9
+ +TCH+++
Sbjct: 858 EYVTCHYKT 866
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DIMTCHHRS 9
+ +TCH+++
Sbjct: 858 EYVTCHYKT 866
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 DIMTCHHRS 9
+ +TCH+++
Sbjct: 857 EYVTCHYKT 865
31|Sequence|151|160|HHRSCVDCLR
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 HHRSCVDC 8
H+ SCV+C
Sbjct: 1776 HYSSCVEC 1783
Query: 1 HHRSCVDC 8
H CVDC
Sbjct: 2197 HRFFCVDC 2204
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 HHRSCVDC 8
H+ SCV+C
Sbjct: 1776 HYSSCVEC 1783
Query: 1 HHRSCVDC 8
+H CVDC
Sbjct: 4357 YHPDCVDC 4364
Query: 5 CVDCLR 10
C DCLR
Sbjct: 5011 CGDCLR 5016
Query: 1 HHRSCVDC 8
H CVDC
Sbjct: 2197 HRFFCVDC 2204
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HHRSCVDCL 9
+H +CV+CL
Sbjct: 4686 YHPNCVNCL 4694
Query: 4 SCVDC 8
+C+DC
Sbjct: 2690 ACIDC 2694
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 2 HRSCVDCLR 10
HR C+ C++
Sbjct: 136 HRFCIPCMK 144
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 HRSCVDCLR 10
H C++C+R
Sbjct: 1286 HTRCINCVR 1294
>sp|E413_ADE12|PROBABLE early E4 13 kDa|Human adenovirus A serotype 12
Query: 2 HRSCVDCLR 10
H SCVD LR
Sbjct: 26 HASCVDTLR 34
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 HHRSCVDC 8
H+ +CVDC
Sbjct: 2417 HNWNCVDC 2424
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 HHRSCVDC 8
H+ +CVDC
Sbjct: 2417 HNWNCVDC 2424
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HHRSCVDCL 9
+H +C++CL
Sbjct: 4663 YHPNCINCL 4671
Query: 4 SCVDC 8
+C+DC
Sbjct: 2667 ACIDC 2671
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HHRSCVDC 8
H +C+DC
Sbjct: 2436 HQWNCIDC 2443
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HHRSCVDC 8
H +C+DC
Sbjct: 2436 HQWNCIDC 2443
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 94 HSPGCVPCVR 103
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 HHRSCVDCLR 10
HHR CV R
Sbjct: 74 HHRPCVPARR 83
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 HHRSCVDCLR 10
HHR CV R
Sbjct: 74 HHRPCVPARR 83
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HAPGCVPCVR 231
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CVDCLR 10
C DCLR
Sbjct: 4986 CGDCLR 4991
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HLPGCVPCIR 231
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 106 HAPGCVPCVR 115
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HLPGCVPCVR 231
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HLAGCVPCVR 231
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HAPGCVPCVR 231
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 5 CVDCLR 10
C DC+R
Sbjct: 232 CSDCVR 237
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1229 HYQQCVD 1235
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1229 HYQQCVD 1235
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1229 HYQQCVD 1235
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1229 HYQQCVD 1235
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1229 HYQQCVD 1235
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HTPGCVPCVR 231
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1229 HYQQCVD 1235
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 RSCVDC 8
R C DC
Sbjct: 1335 RGCCDC 1340
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1227 HYQQCVD 1233
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1227 HYQQCVD 1233
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 HHRSCVDCLR 10
H CV C+R
Sbjct: 222 HLPGCVPCVR 231
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1231 HYQQCVD 1237
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 HHRSCVD 7
H++ CVD
Sbjct: 1226 HYQQCVD 1232
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 HHRSCVDCLR 10
H C+ C+R
Sbjct: 222 HLPGCIPCVR 231
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 SCVDC 8
+C+DC
Sbjct: 2690 ACIDC 2694
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 HHRSCVDC 8
HH+ DC
Sbjct: 3138 HHQHVQDC 3145
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 HHRSCVDC 8
HH+ DC
Sbjct: 3138 HHQHVQDC 3145
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 HHRSCVDC 8
HH+ DC
Sbjct: 3138 HHQHVQDC 3145
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 HHRSCVDC 8
HH+ DC
Sbjct: 3138 HHQHVQDC 3145
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 HHRSCVDC 8
HH+ DC
Sbjct: 3138 HHQHVQDC 3145
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 SCVDC 8
+C+DC
Sbjct: 2667 ACIDC 2671
>sp|ICP47_HSV2S|ICP47 protein|Herpes simplex virus type 2
Query: 2 HRSCVDCLR 10
HR+C D R
Sbjct: 20 HRTCADLRR 28
>sp|ICP47_CHV16|ICP47 protein|Cercopithecine herpesvirus 16 (CeHV-16) (Herpesvirus
Query: 2 HRSCVDCLR 10
HR+C D R
Sbjct: 20 HRTCADLRR 28
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 SCVDCLR 10
SC CL+
Sbjct: 1221 SCCSCLK 1227
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 HHRSCV 6
HH +CV
Sbjct: 1328 HHLNCV 1333
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 HHRSCV 6
HH +CV
Sbjct: 1328 HHLNCV 1333
>sp|VEMP_MERS1|ENVELOPE small membrane protein|Middle East respiratory syndrome-related
Query: 3 RSCVDCL 9
R CV C+
Sbjct: 38 RLCVQCM 44
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 HHRSCVDCLR 10
H CV C++
Sbjct: 222 HTPGCVPCVK 231
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 2 HRSCVDCLR 10
H C+ C++
Sbjct: 146 HPFCIPCMK 154
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 4 SCVDCLR 10
+C+ CLR
Sbjct: 305 NCLKCLR 311
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 HHRSCVDCLR 10
++SC C R
Sbjct: 188 QYKSCKTCCR 197
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 4 SCVDCLR 10
+C+ CLR
Sbjct: 318 NCLKCLR 324
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 RSCVDC 8
R+CV C
Sbjct: 970 RACVGC 975
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 HHRSCVDC 8
HH DC
Sbjct: 3138 HHHHVQDC 3145
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 HHRSCV 6
H++SC+
Sbjct: 169 HNKSCI 174
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 169 HNKSCI 174
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 1 HHRSCV 6
H++SC+
Sbjct: 179 HNKSCI 184
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 HHRSCVDC 8
HH+ DC
Sbjct: 297 HHQVTQDC 304
Query: 1 HHRSCVDCLR 10
H CV C++
Sbjct: 222 HLPGCVPCIK 231
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 HHRSCVDCLR 10
H CV C++
Sbjct: 222 HLPGCVPCIK 231
32|Sequence|156|165|VDCLRQYLRI
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 VDCLRQYL 8
+DCLR YL
Sbjct: 495 LDCLRDYL 502
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 VDCLRQYLRI 10
++ LR YLR+
Sbjct: 18 IEVLRNYLRL 27
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VDCLRQYLRI 10
++ LR YLR+
Sbjct: 18 IEILRNYLRL 27
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VDCLRQYLRI 10
++ LR YLR+
Sbjct: 18 IEILRNYLRL 27
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 VDCLRQYLRI 10
++ LR YLR+
Sbjct: 18 IEILRNYLRL 27
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 VDCLRQYLRI 10
+D L+QYL +
Sbjct: 1637 LDLLKQYLEL 1646
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VDCLRQYLRI 10
++ LR YLR+
Sbjct: 18 IEILRNYLRL 27
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 DCLRQY 7
DC R+Y
Sbjct: 584 DCFRKY 589
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DCLRQYLRI 10
DCL +LR+
Sbjct: 307 DCLLTFLRV 315
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 VDCLRQY 7
V+C R+Y
Sbjct: 2127 VECFRKY 2133
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 VDCLRQY 7
V+C R+Y
Sbjct: 2129 VECFRKY 2135
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VDCLRQY 7
V+C R+Y
Sbjct: 2051 VECFRKY 2057
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LRQYLR 9
L+QYLR
Sbjct: 349 LKQYLR 354
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LRQYLR 9
L+QYLR
Sbjct: 349 LKQYLR 354
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 DCLRQ 6
DC+RQ
Sbjct: 901 DCMRQ 905
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 4 LRQYLR 9
LR+YLR
Sbjct: 371 LREYLR 376
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CLRQYLRI 10
C R Y+R+
Sbjct: 1234 CYRDYVRL 1241
>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)
Query: 3 CLRQYLRI 10
C R Y+R+
Sbjct: 1248 CYRDYVRL 1255
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 DCLRQ 6
DC+RQ
Sbjct: 901 DCMRQ 905
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 DCLRQYLR 9
DC QYL+
Sbjct: 572 DCKYQYLQ 579
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 2 DCLRQYLRI 10
DCL +LR+
Sbjct: 362 DCLLTFLRV 370
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 3 CLRQYL 8
CL QYL
Sbjct: 12 CLHQYL 17
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DCLRQYLRI 10
DCL +LR+
Sbjct: 307 DCLLTFLRV 315
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CLRQYLRI 10
CL Y+RI
Sbjct: 75 CLEAYVRI 82
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CLRQYLRI 10
CL Y+RI
Sbjct: 75 CLEAYVRI 82
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 VDCLRQYLRI 10
+ C++Q+L +
Sbjct: 1038 ITCIKQWLEL 1047
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VDCLRQY 7
++CL+Q+
Sbjct: 85 IECLKQH 91
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 VDCLRQY 7
++CL+Q+
Sbjct: 85 IECLKQH 91
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 DCLRQYL 8
DC RQ+
Sbjct: 140 DCFRQWF 146
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 1 VDCLRQYLR 9
++CL Y R
Sbjct: 147 IECLNAYFR 155
33|Sequence|161|170|QYLRIEISES
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 QYLRIEI 7
+YLR+E+
Sbjct: 349 KYLRVEL 355
>sp|A20_VACCA|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 QYLRIEISE 9
+YL IEI E
Sbjct: 164 KYLEIEIEE 172
>sp|PG148_VACCC|DNA polymerase processivity factor component|Vaccinia virus (strain
Query: 1 QYLRIEISE 9
+YL IEI E
Sbjct: 164 KYLEIEIEE 172
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QYLRIEISE 9
QY+R +SE
Sbjct: 242 QYVRSRLSE 250
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QYLRIEISE 9
QY+R +SE
Sbjct: 242 QYVRSRLSE 250
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QYLRIEISE 9
QY+R +SE
Sbjct: 242 QYVRSRLSE 250
>sp|PG148_VARV|DNA polymerase processivity factor component|Variola virus
Query: 2 YLRIEISE 9
YL IEI E
Sbjct: 165 YLEIEIEE 172
>sp|PG148_VAR67|DNA polymerase processivity factor component|Variola virus (isolate
Query: 2 YLRIEISE 9
YL IEI E
Sbjct: 165 YLEIEIEE 172
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 2 YLRIEISE 9
YL IEI E
Sbjct: 165 YLEIEIEE 172
34|Sequence|166|175|EISESRVNIS
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 ISESRVNIS 10
++ESR NI+
Sbjct: 837 VTESRANIT 845
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 EISESRVNI 9
E+S SR+N+
Sbjct: 264 ELSVSRINV 272
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 EISESRVNIS 10
E S+SR N+S
Sbjct: 140 ESSDSRDNVS 149
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 ESRVNIS 10
E+RVN+S
Sbjct: 1245 EARVNLS 1251
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 ESRVNIS 10
E+RVN+S
Sbjct: 1245 EARVNLS 1251
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 ESRVNIS 10
E+RVN+S
Sbjct: 1243 EARVNLS 1249
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 ESRVNIS 10
E+RVN+S
Sbjct: 1243 EARVNLS 1249
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 ESRVNIS 10
E+RVN+S
Sbjct: 1244 EARVNLS 1250
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 ESRVNIS 10
E+RVN+S
Sbjct: 1244 EARVNLS 1250
35|Sequence|171|180|RVNISCPECT
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 6 CPEC 9
CPEC
Sbjct: 1150 CPEC 1153
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 6 CPEC 9
CPEC
Sbjct: 1150 CPEC 1153
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 SCPEC 9
SCP+C
Sbjct: 1187 SCPKC 1191
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 SCPEC 9
SCP+C
Sbjct: 1185 SCPKC 1189
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 6 CPEC 9
CPEC
Sbjct: 626 CPEC 629
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 6 CPEC 9
CPEC
Sbjct: 625 CPEC 628
>sp|VE7_HPV33|PROTEIN E7|Human papillomavirus 33
Query: 2 VNISCPEC 9
VNI CP C
Sbjct: 87 VNIVCPTC 94
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 6 CPEC 9
CPEC
Sbjct: 627 CPEC 630
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 6 CPEC 9
CPEC
Sbjct: 665 CPEC 668
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 NISCPECT 10
NI+ P+C+
Sbjct: 60 NITVPKCS 67
>sp|VE7_HPV1|PROTEIN E7|Human papillomavirus type 1 (Human
Query: 2 VNISCPECT 10
+NI CP CT
Sbjct: 81 LNIVCPLCT 89
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 CPEC 9
CPEC
Sbjct: 132 CPEC 135
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 CPEC 9
CPEC
Sbjct: 132 CPEC 135
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 CPEC 9
CPEC
Sbjct: 132 CPEC 135
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VNISCPEC 9
V I CP C
Sbjct: 366 VKIYCPAC 373
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VNISCPEC 9
V I CP C
Sbjct: 366 VKIYCPAC 373
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 6 CPECT 10
CP+C+
Sbjct: 1150 CPQCS 1154
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 6 CPECT 10
CP+C+
Sbjct: 1150 CPQCS 1154
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 VNISCPEC 9
+ I CP C
Sbjct: 449 MEIMCPNC 456
>sp|VE7_HPV07|PROTEIN E7|Human papillomavirus 7
Query: 2 VNISCPEC 9
+NI CP C
Sbjct: 100 LNIVCPNC 107
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 6 CPECT 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 6 CPECT 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 6 CPECT 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 6 CPECT 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 6 CPECT 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 RVNISCPECT 10
++NIS CT
Sbjct: 236 KINISISTCT 245
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 CPECT 10
CP CT
Sbjct: 144 CPTCT 148
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 RVNISCPECT 10
++NIS CT
Sbjct: 236 KINISMSTCT 245
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 6 CPECT 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 RVNISCP 7
+ NI+CP
Sbjct: 81 KANITCP 87
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 3 NISCPE 8
N+SCP+
Sbjct: 562 NLSCPQ 567
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 NISCP 7
NISCP
Sbjct: 159 NISCP 163
>sp|VE7_HPV09|PROTEIN E7|Human papillomavirus 9
Query: 2 VNISCPEC 9
+ + CPEC
Sbjct: 79 IQLVCPEC 86
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 3 NISCP 7
NISCP
Sbjct: 159 NISCP 163
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 6 CPECT 10
CP CT
Sbjct: 11 CPLCT 15
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 RVNISCPECT 10
++NIS CT
Sbjct: 236 KINISINTCT 245
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 RVNISCPECT 10
++NIS CT
Sbjct: 236 KINISINTCT 245
>sp|VE7_HPV25|PROTEIN E7|Human papillomavirus 25
Query: 1 RVNISCPEC 9
+ + CPEC
Sbjct: 85 ELQLLCPEC 93
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 ISCPEC 9
+ CP C
Sbjct: 949 LQCPHC 954
>sp|VE7_HPV21|PROTEIN E7|Human papillomavirus 21
Query: 1 RVNISCPEC 9
+ + CPEC
Sbjct: 84 ELQLLCPEC 92
>sp|VE7_HPV08|PROTEIN E7|Human papillomavirus type 8
Query: 2 VNISCPEC 9
+ + CPEC
Sbjct: 87 LQLLCPEC 94
>sp|VE7_HPV36|PROTEIN E7|Human papillomavirus 36
Query: 2 VNISCPEC 9
+ + CPEC
Sbjct: 86 LQLLCPEC 93
36|Sequence|176|185|CPECTERFNP
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 PECTERFNP 10
PE +E+F P
Sbjct: 660 PEASEKFIP 668
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 1 CPECTERF 8
CP C RF
Sbjct: 219 CPICRTRF 226
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 1 CPECTERF 8
CP C RF
Sbjct: 219 CPICRTRF 226
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 CPECTERF 8
CP C RF
Sbjct: 222 CPICRTRF 229
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 1 CPECTERF 8
CP C RF
Sbjct: 222 CPICRTRF 229
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 CPECTERF 8
CP C RF
Sbjct: 222 CPICRTRF 229
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 CPECTER 7
CP TER
Sbjct: 167 CPRITER 173
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 1 CPECTERF 8
CP C RF
Sbjct: 222 CPICRTRF 229
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 1 CPECTERF 8
CP C RF
Sbjct: 222 CPICRTRF 229
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PECTERFN 9
PE T+RF+
Sbjct: 654 PESTDRFD 661
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 CPECTE 6
C ECTE
Sbjct: 380 CDECTE 385
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ECTERF 8
ECTER
Sbjct: 5422 ECTERL 5427
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 CPECTERFN 9
CP+C E ++
Sbjct: 1264 CPDCFESYS 1272
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 CPECTERFNP 10
CP E NP
Sbjct: 367 CPTTGEAHNP 376
Query: 4 CTERFN 9
CTE+F+
Sbjct: 597 CTEKFS 602
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ECTER 7
ECTER
Sbjct: 425 ECTER 429
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 ECTER 7
ECTER
Sbjct: 426 ECTER 430
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 TERFNP 10
TERF+P
Sbjct: 396 TERFDP 401
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 TERFNP 10
TERF+P
Sbjct: 396 TERFDP 401
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 CPECTERFNP 10
CP E NP
Sbjct: 361 CPTMGEAHNP 370
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 CPECTERFNP 10
CP E NP
Sbjct: 359 CPTMGEAHNP 368
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CPECTERFNP 10
CP CT P
Sbjct: 144 CPTCTASGEP 153
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 3 ECTERFNP 10
EC+E F+P
Sbjct: 615 ECSEGFSP 622
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 3 ECTERFNP 10
EC+E F+P
Sbjct: 615 ECSEGFSP 622
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 526 CTEKFS 531
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 PECTERFN 9
PE E+FN
Sbjct: 111 PEKLEKFN 118
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PECTERFN 9
PE E+FN
Sbjct: 111 PEKLEKFN 118
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 4 CTERFNP 10
C E F+P
Sbjct: 279 CMENFSP 285
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 4 CTERFNP 10
C E F+P
Sbjct: 563 CMENFSP 569
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CTERFNP 10
C E F+P
Sbjct: 563 CMENFSP 569
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 PECTERFN 9
PE E+FN
Sbjct: 111 PERLEKFN 118
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PECTERF 8
P+C E+F
Sbjct: 142 PKCIEKF 148
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 ECTERFNP 10
+C E NP
Sbjct: 971 QCYEHLNP 978
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 CTERF 8
CTE+F
Sbjct: 597 CTEKF 601
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 ECTERFNP 10
+C E NP
Sbjct: 971 QCYEHLNP 978
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 CTERFN 9
CTE+F+
Sbjct: 598 CTEKFS 603
>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 CPECTERFNP 10
C E +NP
Sbjct: 237 CDETVSSYNP 246
>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 CPECTERFNP 10
C E +NP
Sbjct: 237 CDETVSSYNP 246
>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CPECTERFNP 10
C E +NP
Sbjct: 237 CDETVSSYNP 246
>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CPECTERFNP 10
C E +NP
Sbjct: 237 CDETVSSYNP 246
>sp|RP35_MONPV|DNA-DIRECTED RNA polymerase 35 kDa|Monkeypox virus (MPXV)
Query: 1 CPECTERFNP 10
C E +NP
Sbjct: 237 CDETVSSYNP 246
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 3 ECTERFN 9
EC ER++
Sbjct: 308 ECLERYS 314
>sp|ORF2_TTVVG|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Human/Ghana/GH1/1996)
Query: 1 CPECTERFN 9
CP+ FN
Sbjct: 60 CPDAVAHFN 68
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 CPECTE 6
C EC+E
Sbjct: 381 CDECSE 386
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 ECTER 7
ECTER
Sbjct: 425 ECTER 429
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 CPECTE 6
CP+C E
Sbjct: 343 CPDCGE 348
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 CPECTE 6
CP+C E
Sbjct: 343 CPDCGE 348
37|Sequence|181|190|ERFNPHDIRL
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ERFNPHD 7
ERF+PH+
Sbjct: 397 ERFDPHE 403
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ERFNPHD 7
ERF+PH+
Sbjct: 397 ERFDPHE 403
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 ERFNPHDIRL 10
E F P D RL
Sbjct: 313 EEFTPDDFRL 322
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FNPHDIRL 10
NPHD+ L
Sbjct: 105 LNPHDLCL 112
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FNPHDIRL 10
NPHD+ L
Sbjct: 105 LNPHDLCL 112
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 ERFNPHDIRL 10
E FN H++ L
Sbjct: 1136 ENFNQHEVLL 1145
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ERFNPHDIRL 10
E FN H++ L
Sbjct: 1136 ENFNQHEVLL 1145
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FNPHDIRL 10
NPHD+ L
Sbjct: 105 LNPHDLCL 112
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RFNPH 6
+FNPH
Sbjct: 79 QFNPH 83
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 RFNPH 6
+FNPH
Sbjct: 79 QFNPH 83
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 PHDIRL 10
PH IRL
Sbjct: 35 PHTIRL 40
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 PHDIRL 10
PH IRL
Sbjct: 35 PHTIRL 40
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 PHDIRL 10
PH IRL
Sbjct: 35 PHTIRL 40
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 ERFNPHDIRL 10
+RF HD+ L
Sbjct: 1878 DRFVKHDLSL 1887
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 ERFNPHDIRL 10
+RF HD+ L
Sbjct: 1878 DRFVKHDLSL 1887
>sp|UL61_HCMVA|UNCHARACTERIZED protein UL61|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ERFNPH 6
ERF PH
Sbjct: 20 ERFRPH 25
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RFNPHDI 8
RF PH++
Sbjct: 597 RFRPHEV 603
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RFNPHDI 8
RF PH++
Sbjct: 597 RFRPHEV 603
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 RFNPHD 7
+FNP D
Sbjct: 775 KFNPED 780
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 RFNPHDI 8
R NPH I
Sbjct: 823 RSNPHTI 829
>sp|EBNA5_EBVA8|EPSTEIN-BARR nuclear antigen leader protein|Epstein-Barr virus (strain AG876)
Query: 1 ERFNPHDI 8
ERF+PH +
Sbjct: 483 ERFDPHPV 490
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ERFNPHD 7
ERF P D
Sbjct: 43 ERFAPED 49
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin)
Query: 1 ERFNPHD 7
ERF P D
Sbjct: 43 ERFAPED 49
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 1 ERFNPHDIRL 10
+RFNP + L
Sbjct: 55 QRFNPPCVTL 64
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 FNPH 6
FNPH
Sbjct: 1012 FNPH 1015
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 FNPHD 7
FNPH+
Sbjct: 685 FNPHN 689
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 3 FNPH 6
FNPH
Sbjct: 99 FNPH 102
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ERFNPHDIR 9
E F P D++
Sbjct: 107 EDFKPEDVK 115
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ERFNPHDIR 9
E F P D++
Sbjct: 107 EDFKPEDVK 115
>sp|VC15_VACCC|PROTEIN C15/B21|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FNPHDI 8
FN HDI
Sbjct: 81 FNVHDI 86
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 4 NPHDIR 9
NP DIR
Sbjct: 7 NPSDIR 12
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 FNPHDIR 9
+NP D R
Sbjct: 1393 YNPRDFR 1399
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FNPHDI 8
F PHDI
Sbjct: 98 FPPHDI 103
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 FNPHDIR 9
+NP D R
Sbjct: 1363 YNPRDFR 1369
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 5 PHDIRL 10
P+DIRL
Sbjct: 25 PNDIRL 30
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 FNPH 6
FNPH
Sbjct: 70 FNPH 73
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 3 FNPHDI 8
FN HD+
Sbjct: 78 FNSHDV 83
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 3 FNPHDI 8
FNP D+
Sbjct: 266 FNPEDL 271
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 3 FNPHDI 8
FNP D+
Sbjct: 266 FNPEDL 271
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 3 FNPHDI 8
FNP D+
Sbjct: 266 FNPEDL 271
38|Sequence|186|195|HDIRLILSDD
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 IRLILSDD 10
+RLIL DD
Sbjct: 54 VRLILQDD 61
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 4 RLILSDD 10
RLILS+D
Sbjct: 111 RLILSED 117
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 HDIRLILSDD 10
HD L L DD
Sbjct: 192 HDYTLWLPDD 201
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 DIRLILSDD 10
D+R LS+D
Sbjct: 378 DLRQFLSED 386
39|Sequence|191|200|ILSDDVLMEK
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ILSDDVLMEK 10
++SD VL+EK
Sbjct: 153 VMSDVVLLEK 162
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ILSDDVLMEK 10
++SD VL+EK
Sbjct: 153 VMSDVVLLEK 162
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 ILSDDVLME 9
IL DD +ME
Sbjct: 674 ILKDDEVME 682
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 LSDDVLMEK 10
L+DD+L+E+
Sbjct: 1981 LNDDLLLEE 1989
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LSDDVLM 8
LSDDVL+
Sbjct: 664 LSDDVLV 670
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSDDVLM 8
LSDDVL+
Sbjct: 664 LSDDVLV 670
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LSDDVLM 8
LSDDVL+
Sbjct: 664 LSDDVLV 670
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 ILSDDVLME 9
+LS DV+ E
Sbjct: 2200 VLSSDVMFE 2208
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ILSDDVLME 9
+LS DV+ E
Sbjct: 2200 VLSSDVMFE 2208
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ILSDDVL 7
+LSDDV+
Sbjct: 21 LLSDDVI 27
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 ILSDDVLME 9
+L DD +ME
Sbjct: 674 VLKDDEVME 682
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 ILSDDVL 7
ILSDD+L
Sbjct: 170 ILSDDML 176
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 ILSDDVL 7
ILSDD+L
Sbjct: 170 ILSDDML 176
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 ILSDDVL 7
ILSDD+L
Sbjct: 170 ILSDDML 176
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 ILSDDVL 7
ILSDD+L
Sbjct: 170 ILSDDML 176
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 LSDDVLME 9
+ DDV+M+
Sbjct: 181 IEDDVIMQ 188
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 ILSDDVLME 9
+L DD +ME
Sbjct: 675 VLKDDEVME 683
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 ILSDDVLME 9
+L DD +ME
Sbjct: 674 VLKDDEVME 682
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 ILSDDVLME 9
+L DD +ME
Sbjct: 674 VLKDDEVME 682
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 SDDVLMEK 10
S DVL+EK
Sbjct: 190 SFDVLLEK 197
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 SDDVLMEK 10
S DVL+EK
Sbjct: 190 SFDVLLEK 197
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 ILSDDVLME 9
+L DD +ME
Sbjct: 674 VLKDDEVME 682
40|Sequence|196|205|VLMEKYEEFM
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 1 VLMEKY 6
VLMEKY
Sbjct: 137 VLMEKY 142
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 VLMEKYEEF 9
+LM K++EF
Sbjct: 163 ILMAKFKEF 171
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 VLMEKY 6
VLME+Y
Sbjct: 175 VLMERY 180
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 EKYEEFM 10
++YEEF+
Sbjct: 2159 QEYEEFI 2165
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 EKYEEFM 10
++YEEF+
Sbjct: 2157 QEYEEFI 2163
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 EKYEEFM 10
++YEEF+
Sbjct: 2160 QEYEEFV 2166
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 1 VLMEKY 6
+LMEKY
Sbjct: 145 MLMEKY 150
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 MEKYEEF 9
+EK+E+F
Sbjct: 1160 VEKFEQF 1166
41|Sequence|201|210|YEEFMLRRWL
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 EFMLRRW 9
+F+LRRW
Sbjct: 591 DFLLRRW 597
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 EFMLRRW 9
+F+LRRW
Sbjct: 591 DFLLRRW 597
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 EFMLRRW 9
+F+LRRW
Sbjct: 591 DFLLRRW 597
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 YEEFMLRRW 9
YEEF L+R+
Sbjct: 505 YEEFYLKRF 513
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 YEEFMLRRW 9
YEEF L+R+
Sbjct: 507 YEEFYLKRF 515
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 YEEFMLRRW 9
YEEF L+R+
Sbjct: 500 YEEFYLKRF 508
>sp|ICP34_HHV2H|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 2 (strain HG52)
Query: 5 MLRRWL 10
+LRRWL
Sbjct: 63 LLRRWL 68
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 591 DFLLQRW 597
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 591 DFLLQRW 597
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 591 DFLLQRW 597
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 592 DFLLQRW 598
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 592 DFLLQRW 598
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 592 DFLLQRW 598
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 591 DFLLQRW 597
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 3 EFMLRRW 9
+F+L+RW
Sbjct: 591 DFLLQRW 597
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 EFMLRRW 9
EF+L+ W
Sbjct: 2625 EFLLKTW 2631
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 EFMLRRW 9
+F+L RW
Sbjct: 592 DFLLTRW 598
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 EFMLRRW 9
+F+L RW
Sbjct: 592 DFLLTRW 598
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 EFMLRRW 9
+F+L RW
Sbjct: 592 DFLLTRW 598
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 EFMLRRW 9
+F+L RW
Sbjct: 592 DFLLTRW 598
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 EFMLRRW 9
EF+L+ W
Sbjct: 2644 EFLLKAW 2650
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 EFMLRRW 9
+F+L RW
Sbjct: 592 DFLLARW 598
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 EFMLRRW 9
+F+LR W
Sbjct: 2644 DFLLRAW 2650
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 3 EFMLRRW 9
EF L RW
Sbjct: 91 EFALERW 97
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 FMLRRWL 10
FML WL
Sbjct: 83 FMLHGWL 89
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 FMLRRWL 10
FML WL
Sbjct: 83 FMLHGWL 89
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 EEFMLRRW 9
E FM++ W
Sbjct: 2134 EHFMVKTW 2141
>sp|ICP34_HHV1N|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain MGH-10)
Query: 4 FMLRRWL 10
+LR+WL
Sbjct: 55 LLLRQWL 61
>sp|ST_POVWU|SMALL t antigen|WU polyomavirus (WUPyV)
Query: 1 YEEFMLRRW 9
+EE++L+ W
Sbjct: 110 FEEYILKDW 118
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 MLRRW 9
+LRRW
Sbjct: 64 LLRRW 68
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 MLRRW 9
ML+RW
Sbjct: 66 MLKRW 70
>sp|ST_POVK6|SMALL t antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 YEEFMLRRW 9
YE +++++W
Sbjct: 106 YEAYIMKQW 114
>sp|ST_POVK3|SMALL t antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 YEEFMLRRW 9
YE +++++W
Sbjct: 106 YEAYIMKQW 114
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 EFMLRR 8
EF+LRR
Sbjct: 1150 EFLLRR 1155
>sp|ST_POVKI|SMALL t antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 YEEFMLRRW 9
YE +++++W
Sbjct: 106 YEAYIMKQW 114
>sp|ICP34_HHV1D|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain CVG-2)
Query: 4 FMLRRWL 10
+LR+WL
Sbjct: 62 LLLRQWL 68
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 YEEFMLRR 8
++ FMLR+
Sbjct: 165 FQNFMLRK 172
>sp|ICP34_HHV11|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain 17)
Query: 4 FMLRRWL 10
+LR+WL
Sbjct: 61 LLLRQWL 67
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 4 FMLRRW 9
F+L+RW
Sbjct: 71 FILKRW 76
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 YEEFMLRR 8
YE F LR+
Sbjct: 117 YESFFLRK 124
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 YEEFMLRR 8
YE F LR+
Sbjct: 117 YESFFLRK 124
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 YEEFMLRR 8
YE F LR+
Sbjct: 117 YESFFLRK 124
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 YEEFMLRR 8
YE F LR+
Sbjct: 117 YESFFLRK 124
>sp|ICP34_HHV1F|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 1 (strain F)
Query: 4 FMLRRWL 10
+LR+WL
Sbjct: 61 LLLRQWL 67
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FMLRRW 9
F+L+RW
Sbjct: 71 FILKRW 76
42|Sequence|206|215|LRRWLVADPD
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 LRRWLVAD 8
+R+WLV+D
Sbjct: 68 IRKWLVSD 75
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 LRRWLVAD 8
+R+WLV+D
Sbjct: 68 IRKWLVSD 75
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 LRRWLVAD 8
+R+WLV+D
Sbjct: 68 IRKWLVSD 75
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 1 LRRWLVADPD 10
+R W VADP+
Sbjct: 157 VRIWDVADPN 166
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 4 WLVADP 9
WLV DP
Sbjct: 149 WLVVDP 154
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 WLVADP 9
WLV DP
Sbjct: 149 WLVVDP 154
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 LRRWLVADP 9
+R W VADP
Sbjct: 157 VRIWDVADP 165
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 LRRWLVAD 8
L+RW V D
Sbjct: 2342 LKRWFVPD 2349
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 3 RWLVADPD 10
+WL++D D
Sbjct: 159 KWLLSDTD 166
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 LRRWLVAD 8
L+RWL D
Sbjct: 6513 LKRWLPPD 6520
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RRWLVADPD 10
R W+ DPD
Sbjct: 382 RVWVFNDPD 390
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RRWLVADPD 10
R W+ DPD
Sbjct: 382 RVWVFNDPD 390
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLLLDPN 249
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 4 WLVADPD 10
WL+ DP+
Sbjct: 243 WLMLDPN 249
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 1 LRRWLVADP 9
+R W V+DP
Sbjct: 156 VRLWDVSDP 164
>sp|NEP_I96A0|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 RWLVAD 8
RWL+A+
Sbjct: 77 RWLIAE 82
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 LRRWLVADP 9
+R W V+DP
Sbjct: 156 VRIWDVSDP 164
>sp|NEP_I82A8|NUCLEAR export protein|Influenza A virus (strain
Query: 3 RWLVAD 8
RWL+A+
Sbjct: 77 RWLIAE 82
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LRRWL 5
L+RWL
Sbjct: 6542 LKRWL 6546
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 LRRWLVADPD 10
LRR L DPD
Sbjct: 367 LRRRLHKDPD 376
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 RRWLVAD 8
RR++VAD
Sbjct: 16 RRFIVAD 22
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 RRWLVAD 8
RR++VAD
Sbjct: 16 RRFIVAD 22
>sp|ICP34_HHV2H|NEUROVIRULENCE factor ICP34.5|Human herpesvirus 2 (strain HG52)
Query: 1 LRRWLV 6
LRRWL+
Sbjct: 64 LRRWLL 69
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 4 WLVADP 9
WLV DP
Sbjct: 241 WLVRDP 246
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 LRRWLVAD 8
LRRW V +
Sbjct: 65 LRRWRVMN 72
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 4 WLVADP 9
WLV DP
Sbjct: 241 WLVRDP 246
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRRWLVADPD 10
L RW + PD
Sbjct: 808 LLRWGLTTPD 817
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRRWLVADPD 10
L RW + PD
Sbjct: 796 LLRWGLTTPD 805
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 RRWLVADPD 10
R+W PD
Sbjct: 2048 RKWCFEGPD 2056
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRRWLVADPD 10
L RW + PD
Sbjct: 796 LLRWGLTTPD 805
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LRRWLVADPD 10
L RW + PD
Sbjct: 808 LLRWGLTTPD 817
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 LRRWL 5
LRRW+
Sbjct: 193 LRRWI 197
43|Sequence|211|220|VADPDCRWCP
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 DPDCRW 8
DPDC+W
Sbjct: 1959 DPDCQW 1964
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 5 DCRWC 9
DC+WC
Sbjct: 62 DCQWC 66
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 DCRWC 9
DC+WC
Sbjct: 62 DCQWC 66
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDCR
Sbjct: 328 ANPDCR 333
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDCR
Sbjct: 322 ANPDCR 327
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 VADPDC 6
VADP+C
Sbjct: 766 VADPNC 771
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 VADPDC 6
VADP+C
Sbjct: 766 VADPNC 771
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDCR
Sbjct: 322 ANPDCR 327
>sp|NSP1_ROTH6|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTHD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDCR
Sbjct: 328 ANPDCR 333
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 5 DCRWC 9
+C+WC
Sbjct: 323 NCKWC 327
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROTH3|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 DCRWC 9
+C+WC
Sbjct: 323 NCKWC 327
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 VADPDCRW 8
+A+P RW
Sbjct: 211 IAEPQGRW 218
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 5 DCRWC 9
+C+WC
Sbjct: 320 NCKWC 324
>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 6 CRWC 9
C+WC
Sbjct: 322 CKWC 325
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 VADPDCRW 8
V PD RW
Sbjct: 205 VPKPDGRW 212
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 329 ANPDCK 334
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 332 ANPDCK 337
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 329 ANPDCK 334
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 327 ANPDCK 332
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 332 ANPDCK 337
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 329 ANPDCK 334
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 324 ANPDCK 329
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 324 ANPDCK 329
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 327 ANPDCK 332
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 325 ANPDCK 330
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 325 ANPDCK 330
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 325 ANPDCK 330
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|NS1_INBVJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Victoria/1987)
Query: 4 PDCRW 8
P+C W
Sbjct: 114 PNCNW 118
>sp|NS1_INB|NON-STRUCTURAL protein 1|Influenza B virus (strain B/ID/1986)
Query: 4 PDCRW 8
P+C W
Sbjct: 114 PNCNW 118
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 PDCRWCP 10
P CRW P
Sbjct: 26 PRCRWRP 32
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|UORF_ZIKV|UORF protein|Zika virus (ZIKV)
Query: 3 DPDCRW 8
DPDC++
Sbjct: 20 DPDCQY 25
>sp|NS1_INBGA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/GA/1986)
Query: 4 PDCRW 8
P+C W
Sbjct: 114 PNCNW 118
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 324 ANPDCK 329
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 ADPDCR 7
A+P+CR
Sbjct: 265 AEPNCR 270
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 4 PDCRW 8
P+C W
Sbjct: 114 PNCNW 118
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 4 PDCRW 8
P+C W
Sbjct: 114 PNCNW 118
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 322 ANPDCK 327
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ADPDCR 7
A+P+CR
Sbjct: 588 AEPNCR 593
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 DCRWC 9
DCR C
Sbjct: 2169 DCRLC 2173
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 325 ANPDCK 330
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CRWCP 10
CR CP
Sbjct: 5765 CRRCP 5769
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 324 ANPDCK 329
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CRWCP 10
CR CP
Sbjct: 5742 CRRCP 5746
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 VADPDCRW 8
+ +P+ RW
Sbjct: 234 IVEPEGRW 241
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 1 VADPDCRW 8
+ +P+ RW
Sbjct: 234 IVEPEGRW 241
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 2 ADPDC 6
+DPDC
Sbjct: 291 SDPDC 295
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 PDCRWC 9
PD RW
Sbjct: 229 PDVRWA 234
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 326 ANPDCK 331
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|LANA1_HHV8P|PROTEIN LANA1|Human herpesvirus 8 type P
Query: 3 DPDCRW 8
DP C+W
Sbjct: 1016 DPKCQW 1021
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DPDCRWCP 10
+PD W P
Sbjct: 796 EPDRPWLP 803
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPDCRWCP 10
+PD W P
Sbjct: 796 EPDRPWLP 803
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 2 ADPDC 6
+DPDC
Sbjct: 290 SDPDC 294
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DPDCRWC 9
+PDC W
Sbjct: 52 NPDCAWL 58
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DPDCRWC 9
+PDC W
Sbjct: 52 NPDCAWL 58
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DPDCRWC 9
+PDC W
Sbjct: 52 NPDCAWL 58
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 328 ANPDCK 333
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DPDCRWC 9
+PDC W
Sbjct: 51 NPDCAWL 57
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DPDCRWC 9
+PDC W
Sbjct: 61 NPDCAWL 67
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 323 ANPDCK 328
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 ADPDCR 7
A+PDC+
Sbjct: 329 ANPDCK 334
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 DPDCRWC 9
+PDC W
Sbjct: 52 NPDCAWL 58
>sp|VE6_HPV19|PROTEIN E6|Human papillomavirus 19
Query: 6 CRWC 9
CRWC
Sbjct: 83 CRWC 86
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 2 ADPDC 6
+DPDC
Sbjct: 297 SDPDC 301
>sp|ORF3_TTVG1|UNCHARACTERIZED ORF3 protein|Torque teno midi virus 1
Query: 1 VADPDCRWC 9
+AD WC
Sbjct: 28 IADSHDSWC 36
44|Sequence|216|225|CRWCPAPDCG
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CRWCPAPD 8
CR+ P PD
Sbjct: 760 CRFYPTPD 767
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 WCPAP 7
WCP P
Sbjct: 846 WCPRP 850
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 WCPAP 7
WCP P
Sbjct: 851 WCPRP 855
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 WCPAP 7
WCP P
Sbjct: 846 WCPRP 850
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 WCPAP 7
WCP P
Sbjct: 848 WCPRP 852
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 WCPAP 7
WCP P
Sbjct: 848 WCPRP 852
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 WCPAP 7
WCP P
Sbjct: 847 WCPRP 851
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 WCPAP 7
WCP P
Sbjct: 847 WCPRP 851
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 WCPAP 7
WCP P
Sbjct: 812 WCPRP 816
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 WCPAP 7
WCP P
Sbjct: 819 WCPRP 823
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 RWCP 5
RWCP
Sbjct: 768 RWCP 771
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 WCPAP 7
WCP P
Sbjct: 845 WCPRP 849
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 WCPAP 7
WCP P
Sbjct: 819 WCPRP 823
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 WCPAP 7
WCP P
Sbjct: 814 WCPRP 818
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 WCPAP 7
WCP P
Sbjct: 825 WCPRP 829
Query: 2 RWCPAPDC 9
RW P C
Sbjct: 2105 RWTKNPSC 2112
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 RWCPAPD 8
RWC A D
Sbjct: 1638 RWCKAND 1644
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 2 RWCPAPDC 9
+WC P C
Sbjct: 336 KWCQKPLC 343
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 CRWCPAPDCG 10
C+ CP CG
Sbjct: 47 CKVCPCDYCG 56
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CRWCPA 6
CR CPA
Sbjct: 5765 CRRCPA 5770
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CRWCPA 6
CR CPA
Sbjct: 5742 CRRCPA 5747
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 RWCP 5
RWCP
Sbjct: 768 RWCP 771
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 CPAPDCG 10
C AP CG
Sbjct: 5360 CNAPGCG 5366
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 CRWCPAP 7
CR C AP
Sbjct: 1101 CRSCTAP 1107
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 RWCPAP 7
RW P+P
Sbjct: 744 RWIPSP 749
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 2 RW-CPAPD 8
+W CP PD
Sbjct: 175 KWRCPFPD 182
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 2 RW-CPAPD 8
+W CP PD
Sbjct: 175 KWRCPFPD 182
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 2 RW-CPAPD 8
+W CP PD
Sbjct: 175 KWRCPFPD 182
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 2 RW-CPAPD 8
+W CP PD
Sbjct: 175 KWRCPFPD 182
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 RWCPAP 7
RW P P
Sbjct: 496 RWSPDP 501
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 RWCPAP 7
RW P P
Sbjct: 494 RWSPDP 499
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 4 CPAPD 8
CP+PD
Sbjct: 209 CPSPD 213
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 RWCPA 6
RWC A
Sbjct: 1637 RWCKA 1641
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 RWCPA 6
RWC A
Sbjct: 1637 RWCKA 1641
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 RWCPA 6
RWC A
Sbjct: 1637 RWCKA 1641
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 RWCPA 6
RWC A
Sbjct: 1637 RWCKA 1641
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 RWCPA 6
RWC A
Sbjct: 1637 RWCKA 1641
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 RWCPA 6
RWC A
Sbjct: 1638 RWCKA 1642
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 RWCPA 6
RWC A
Sbjct: 1638 RWCKA 1642
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 2 RWCPAP 7
+W P+P
Sbjct: 305 KWLPSP 310
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 CPAPDC 9
C AP+C
Sbjct: 5435 CNAPNC 5440
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 CPAPDC 9
C AP+C
Sbjct: 5385 CNAPNC 5390
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 CPAPDC 9
C AP+C
Sbjct: 5405 CNAPNC 5410
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 RWCPAPDCG 10
R CP CG
Sbjct: 126 RQCPLLGCG 134
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RWCPAPDCG 10
R CP CG
Sbjct: 125 RQCPLLGCG 133
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 WCPAPD 8
WC A D
Sbjct: 86 WCDASD 91
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 PAPDCG 10
P P+CG
Sbjct: 74 PDPNCG 79
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PAPDCG 10
P P+CG
Sbjct: 74 PDPNCG 79
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 PAPDCG 10
P P+CG
Sbjct: 74 PDPNCG 79
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 RWCP 5
+WCP
Sbjct: 269 KWCP 272
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 2 RWCPAPD 8
+WCP PD
Sbjct: 269 KWCP-PD 274
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 RWCP 5
+WCP
Sbjct: 269 KWCP 272
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RWCPAP 7
RW P P
Sbjct: 774 RWIPDP 779
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 RWCPAP 7
RW PAP
Sbjct: 13 RWRPAP 18
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 CPAPDCG 10
PAP CG
Sbjct: 2369 SPAPSCG 2375
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 2 RWCP 5
+WCP
Sbjct: 269 KWCP 272
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RWCPAP 7
RW PAP
Sbjct: 578 RWRPAP 583
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RWCPAP 7
RW PAP
Sbjct: 578 RWRPAP 583
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WCPAPDCG 10
WC DCG
Sbjct: 148 WCLDRDCG 155
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 RWCPAP 7
RW PAP
Sbjct: 559 RWRPAP 564
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WCPAPDCG 10
W P PD G
Sbjct: 346 WDPDPDDG 353
45|Sequence|221|230|APDCGYAVIA
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 PDCGYAVIA 10
PDCG ++ A
Sbjct: 439 PDCGKSMFA 447
>sp|UORF_ZIKV|UORF protein|Zika virus (ZIKV)
Query: 2 PDCGYA 7
PDC YA
Sbjct: 21 PDCQYA 26
>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 PDCGYA 7
PDC YA
Sbjct: 21 PDCQYA 26
>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French
Query: 2 PDCGYA 7
PDC YA
Sbjct: 21 PDCQYA 26
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 APDCGYAVI 9
+PDCG ++
Sbjct: 153 SPDCGMIIL 161
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 APDCGYAVI 9
+PDCG ++
Sbjct: 153 SPDCGMIIL 161
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 APDCGYAVI 9
+PDCG ++
Sbjct: 153 SPDCGMIIL 161
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 APDCGYAVI 9
+PDCG ++
Sbjct: 153 SPDCGMIIL 161
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 2 PDCGYAV 8
PDC Y +
Sbjct: 167 PDCSYRI 173
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 APDCGYAV 8
AP C YA+
Sbjct: 302 APRCMYAI 309
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 PDCGYAVI 9
PDC Y ++
Sbjct: 312 PDCTYYLV 319
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 PDCGYAV 8
PDC Y +
Sbjct: 181 PDCKYKI 187
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 2 PDCGYA 7
PDCG++
Sbjct: 5 PDCGFS 10
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 APDCGYA 7
A DCG+A
Sbjct: 341 ALDCGFA 347
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 3 DCGYAVIA 10
DCGY I
Sbjct: 378 DCGYEKIG 385
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 PDCGYAV 8
PDC Y +
Sbjct: 182 PDCKYKI 188
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 PDCGYAVIA 10
PDC Y ++
Sbjct: 618 PDCPYPLLG 626
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 PDCGYAVIA 10
PDC Y ++
Sbjct: 618 PDCPYPLLG 626
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 PDCGYAVIA 10
PDC Y ++
Sbjct: 618 PDCPYPLLG 626
>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 APDCG 5
AP+CG
Sbjct: 18 APECG 22
>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 APDCG 5
AP+CG
Sbjct: 18 APECG 22
>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 APDCG 5
AP+CG
Sbjct: 18 APECG 22
>sp|YVDB_VACCC|UNCHARACTERIZED 8.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DCGYAV 8
+CGY+V
Sbjct: 26 NCGYSV 31
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 APDCG 5
PDCG
Sbjct: 1221 GPDCG 1225
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 4 CGYAVI 9
CGYA +
Sbjct: 130 CGYATV 135
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 APDCGYA 7
AP+CG +
Sbjct: 1091 APECGMS 1097
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 PDCG 5
PDCG
Sbjct: 345 PDCG 348
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 APDCGYA 7
AP+CG +
Sbjct: 1091 APECGMS 1097
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 APDCGYA 7
AP+CG +
Sbjct: 1091 APECGMS 1097
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 DCGYAV 8
D GYAV
Sbjct: 2035 DAGYAV 2040
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 APDCGYA 7
AP+CG +
Sbjct: 1091 APECGMS 1097
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 APDCG 5
AP+CG
Sbjct: 1080 APECG 1084
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 APDCG 5
AP+CG
Sbjct: 1080 APECG 1084
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 APDCG 5
AP+CG
Sbjct: 1081 APECG 1085
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 APDCG 5
AP+CG
Sbjct: 1080 APECG 1084
46|Sequence|226|235|YAVIAFGCAS
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 3 VIAFGCAS 10
V+ FGC S
Sbjct: 410 VVLFGCHS 417
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 IAFGCA 9
+ FGCA
Sbjct: 729 VKFGCA 734
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 YAVIAFGCA 9
YA I GCA
Sbjct: 3459 YAAILNGCA 3467
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 YAVIAFGCA 9
YA I GCA
Sbjct: 3459 YAAILNGCA 3467
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 IAFGCA 9
+ FGCA
Sbjct: 15 LTFGCA 20
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IAFGCA 9
+ FGCA
Sbjct: 15 LTFGCA 20
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IAFGCA 9
+AFGC+
Sbjct: 134 VAFGCS 139
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 IAFGCA 9
+AFGC+
Sbjct: 130 VAFGCS 135
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 AVIAFG 7
AV+AFG
Sbjct: 119 AVVAFG 124
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 YAVIAFGCA 9
Y FGCA
Sbjct: 465 YPPTRFGCA 473
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 YAVIAFGCA 9
Y FGCA
Sbjct: 465 YPPTRFGCA 473
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 YAVIAFGCA 9
Y FGCA
Sbjct: 465 YPPTRFGCA 473
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 YAVIAFGCA 9
Y FGCA
Sbjct: 465 YPPTRFGCA 473
47|Sequence|231|240|FGCASCPKLT
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 FGCASCPKL 9
+ CA+CP+L
Sbjct: 421 YACATCPQL 429
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 FGCASCPKL 9
+ CA+CP++
Sbjct: 421 YACATCPQI 429
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FGCASCPK 8
FG ASCP+
Sbjct: 783 FGSASCPE 790
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FGCASCPK 8
FG ASCP+
Sbjct: 783 FGSASCPE 790
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FGCASCPK 8
FG ASCP+
Sbjct: 783 FGSASCPE 790
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 FGCASCPKL 9
FG A+ PKL
Sbjct: 202 FGAANFPKL 210
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 CASCPKLT 10
C++CP ++
Sbjct: 543 CSACPDMS 550
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 6 CPKLT 10
CPKLT
Sbjct: 180 CPKLT 184
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 6 CPKLT 10
CPKLT
Sbjct: 180 CPKLT 184
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 6 CPKLT 10
CPKLT
Sbjct: 180 CPKLT 184
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 5 SCPKLT 10
SCP+LT
Sbjct: 910 SCPELT 915
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 ASCPK 8
ASCPK
Sbjct: 1186 ASCPK 1190
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 ASCPK 8
ASCPK
Sbjct: 1184 ASCPK 1188
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 6 CPKLT 10
CPKLT
Sbjct: 107 CPKLT 111
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 CASCP 7
CA+CP
Sbjct: 383 CATCP 387
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 3 CASCP 7
CA+CP
Sbjct: 383 CATCP 387
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 6 CPKLT 10
CPKLT
Sbjct: 180 CPKLT 184
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FGCASCPKL 9
+ CA+ P+L
Sbjct: 421 YACATSPQL 429
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 6 CPKLT 10
CPKLT
Sbjct: 180 CPKLT 184
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 6 CPKLT 10
CPKLT
Sbjct: 180 CPKLT 184
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 FGCASCPKL 9
+ C CP L
Sbjct: 661 YACGPCPLL 669
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 SCPKLT 10
+CPK+T
Sbjct: 206 TCPKVT 211
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 FGCASCPKL 9
+ C CP L
Sbjct: 661 YACGPCPLL 669
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 FGCASCPKL 9
+ C CP L
Sbjct: 661 YACGPCPLL 669
>sp|MC005_MCV1|PROTEIN MC005|Molluscum contagiosum virus subtype 1
Query: 2 GCASCPKL 9
GCASC ++
Sbjct: 10 GCASCVRI 17
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 SCPKLT 10
+CPK+T
Sbjct: 216 ACPKVT 221
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 SCPKLT 10
+CPK+T
Sbjct: 209 ACPKVT 214
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 SCPKLT 10
+CPK+T
Sbjct: 204 ACPKVT 209
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 5 SCPKL 9
SCPKL
Sbjct: 15 SCPKL 19
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 GCASCPKL 9
GC S P+L
Sbjct: 317 GCMSHPQL 324
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 GCASC 6
GCA C
Sbjct: 160 GCAPC 164
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 GCASC 6
GCA C
Sbjct: 162 GCAPC 166
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 GCASC 6
GCA C
Sbjct: 162 GCAPC 166
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 GCASC 6
GCA C
Sbjct: 160 GCAPC 164
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 GCASC 6
GCA C
Sbjct: 189 GCAPC 193
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 GCASC 6
GCA C
Sbjct: 162 GCAPC 166
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CASCP 7
C+SCP
Sbjct: 341 CSSCP 345
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 1 FGCASCP 7
F CA CP
Sbjct: 116 FQCALCP 122
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 FGCASCPKL 9
+ C +CP L
Sbjct: 928 WACVACPLL 936
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 4 ASCPKLT 10
A CP+LT
Sbjct: 45 AECPELT 51
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 FGCASCPKL 9
+ C S PKL
Sbjct: 1218 YSCGSEPKL 1226
48|Sequence|236|245|CPKLTCGREG
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 CPKLTCGRE 9
CP+L C E
Sbjct: 141 CPQLPCANE 149
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 417 CGREG 421
Query: 4 LTCGREG 10
CG+EG
Sbjct: 394 FNCGKEG 400
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 410 CGREG 414
Query: 4 LTCGREG 10
CG+EG
Sbjct: 387 FNCGKEG 393
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 418 CGREG 422
Query: 4 LTCGREG 10
CG+EG
Sbjct: 395 FNCGKEG 401
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 415 CGREG 419
Query: 4 LTCGREG 10
CG+EG
Sbjct: 392 FNCGKEG 398
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 414 CGREG 418
Query: 4 LTCGREG 10
CG+EG
Sbjct: 391 FNCGKEG 397
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 411 CGREG 415
Query: 4 LTCGREG 10
CG+EG
Sbjct: 388 FNCGKEG 394
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 416 CGREG 420
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 417 CGREG 421
Query: 4 LTCGREG 10
CG+EG
Sbjct: 394 FNCGKEG 400
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 410 CGREG 414
Query: 4 LTCGREG 10
CG+EG
Sbjct: 387 FNCGKEG 393
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 CPKLTCGRE 9
C K TC ++
Sbjct: 406 CAKFTCSKK 414
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 414 CGREG 418
Query: 4 LTCGREG 10
CG+EG
Sbjct: 391 FNCGKEG 397
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
+TC REG
Sbjct: 294 MTCIREG 300
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 392 FNCGKEG 398
Query: 6 CGREG 10
CG+EG
Sbjct: 415 CGQEG 419
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 390 FNCGKEG 396
Query: 6 CGREG 10
CG+EG
Sbjct: 413 CGKEG 417
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 387 FNCGKEG 393
Query: 6 CGREG 10
CG+EG
Sbjct: 410 CGKEG 414
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 399 FNCGKEG 405
Query: 6 CGREG 10
CG+EG
Sbjct: 422 CGKEG 426
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 390 FNCGKEG 396
Query: 6 CGREG 10
CG+EG
Sbjct: 413 CGKEG 417
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 394 FNCGKEG 400
Query: 6 CGREG 10
CG+EG
Sbjct: 417 CGKEG 421
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 388 FNCGKEG 394
Query: 6 CGREG 10
CG+EG
Sbjct: 411 CGKEG 415
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 394 FNCGKEG 400
Query: 6 CGREG 10
CG+EG
Sbjct: 417 CGKEG 421
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 388 FNCGKEG 394
Query: 6 CGREG 10
CG+EG
Sbjct: 411 CGKEG 415
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 388 FNCGKEG 394
Query: 6 CGREG 10
CG+EG
Sbjct: 411 CGKEG 415
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 396 FNCGKEG 402
Query: 6 CGREG 10
CG+EG
Sbjct: 419 CGQEG 423
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 396 FNCGKEG 402
Query: 6 CGREG 10
CG+EG
Sbjct: 419 CGKEG 423
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 395 FNCGKEG 401
Query: 6 CGREG 10
CG+EG
Sbjct: 418 CGKEG 422
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 397 FNCGKEG 403
Query: 6 CGREG 10
CG+EG
Sbjct: 420 CGQEG 424
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 397 FNCGKEG 403
Query: 6 CGREG 10
CG+EG
Sbjct: 420 CGQEG 424
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 394 FNCGKEG 400
Query: 6 CGREG 10
CG+EG
Sbjct: 417 CGKEG 421
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CG+EG
Sbjct: 398 CGKEG 402
Query: 6 CGREG 10
CG+EG
Sbjct: 419 CGQEG 423
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CG+EG
Sbjct: 415 CGKEG 419
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 CPKLTCGR 8
C K TC +
Sbjct: 401 CAKFTCAK 408
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CG+EG
Sbjct: 415 CGKEG 419
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 395 FNCGKEG 401
Query: 6 CGREG 10
CG+EG
Sbjct: 418 CGQEG 422
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KMTCGQ 21
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KMTCGQ 21
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KMTCGQ 21
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KMTCGQ 21
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KMTCGQ 21
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KMTCGQ 21
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 392 CGKEG 396
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 393 CGKEG 397
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 394 CGKEG 398
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 395 CGKEG 399
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 394 CGKEG 398
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 394 CGKEG 398
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 394 CGKEG 398
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 415 CGREG 419
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 416 CGREG 420
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 418 CGREG 422
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CGREG
Sbjct: 411 CGREG 415
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KITCGQ 21
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 3 KLTCGR 8
K+TCG+
Sbjct: 16 KITCGQ 21
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 CPKLTC 6
C K TC
Sbjct: 408 CAKFTC 413
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 6 CGREG 10
CG+EG
Sbjct: 394 CGKEG 398
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 397 FNCGKEG 403
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 CPKLTC 6
C K TC
Sbjct: 404 CAKFTC 409
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 397 FNCGKEG 403
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 399 FNCGKEG 405
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 390 FNCGKEG 396
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 388 FNCGKEG 394
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 6 CGREG 10
CGREG
Sbjct: 31 CGREG 35
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 394 FNCGKEG 400
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 LTCGREG 10
CG+EG
Sbjct: 393 FNCGKEG 399
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 6 CGREG 10
CG+EG
Sbjct: 416 CGKEG 420
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LTCGRE 9
+TCG E
Sbjct: 160 ITCGNE 165
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LTCGRE 9
+TCG E
Sbjct: 160 ITCGNE 165
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 4 LTCGRE 9
+TCG E
Sbjct: 160 ITCGNE 165
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 4 LTCGRE 9
+TCG E
Sbjct: 160 ITCGNE 165
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LTCGRE 9
+TCG E
Sbjct: 160 ITCGNE 165
49|Sequence|241|250|CGREGCGTEF
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|REV_HV2EH|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 CGREGC 6
CGR+ C
Sbjct: 117 CGRDSC 122
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 4 EGCGT 8
EGCGT
Sbjct: 52 EGCGT 56
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 CGREGCGT 8
CG+ GC T
Sbjct: 130 CGKWGCET 137
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 CGREGCGT 8
CG+ GC T
Sbjct: 130 CGKWGCET 137
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 CGREGCGT 8
CG+ GC T
Sbjct: 130 CGKWGCET 137
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 CGREGCGT 8
C R+G GT
Sbjct: 773 CKRDGNGT 780
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 CGREGCG 7
CG GCG
Sbjct: 937 CGAIGCG 943
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 CGREGCGTEF 10
C R CG F
Sbjct: 2 CRRPDCGFSF 11
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 GREGCG 7
G EGCG
Sbjct: 87 GNEGCG 92
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EGCGTE 9
E CGTE
Sbjct: 342 EHCGTE 347
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 EGCGTE 9
E CGTE
Sbjct: 342 EHCGTE 347
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 EGCGTEF 10
E C TEF
Sbjct: 920 ESCKTEF 926
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 EGCGTEF 10
E C TEF
Sbjct: 921 ESCKTEF 927
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 EGCGTEF 10
E C TEF
Sbjct: 920 ESCKTEF 926
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 EGCGTEF 10
E C TEF
Sbjct: 921 ESCKTEF 927
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 EGCGTEF 10
E C TEF
Sbjct: 921 ESCKTEF 927
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 EGCGTEF 10
E C TEF
Sbjct: 920 ESCKTEF 926
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CGREGCGT 8
C R G GT
Sbjct: 250 CNRLGVGT 257
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CGREGCGT 8
C R G GT
Sbjct: 250 CNRLGVGT 257
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 GREGCGT 8
+EGC T
Sbjct: 10 AKEGCST 16
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 EGCGTE 9
E CGTE
Sbjct: 342 EFCGTE 347
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 EGCGTE 9
E CGTE
Sbjct: 342 EFCGTE 347
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CGREGCGT 8
C R G GT
Sbjct: 250 CNRLGVGT 257
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CGREGCGT 8
C R G GT
Sbjct: 250 CNRLGVGT 257
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 CGREGCG 7
CG GCG
Sbjct: 818 CGGWGCG 824
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 CGREGCG 7
CG GCG
Sbjct: 818 CGGWGCG 824
50|Sequence|246|255|CGTEFCYHCK
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 6 CYHC 9
CYHC
Sbjct: 139 CYHC 142
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 6 CYHC 9
CYHC
Sbjct: 139 CYHC 142
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 CYHC 9
CYHC
Sbjct: 139 CYHC 142
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 6 CYHC 9
CYHC
Sbjct: 139 CYHC 142
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 6 CYHC 9
CYHC
Sbjct: 139 CYHC 142
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 EFCYHC 9
E+C HC
Sbjct: 650 EYCNHC 655
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 EFCYHC 9
E+C HC
Sbjct: 650 EYCNHC 655
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 EFCYHC 9
EF +HC
Sbjct: 79 EFAFHC 84
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 4 EFCYHC 9
EF +HC
Sbjct: 79 EFAFHC 84
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 369 CGGEFLY 375
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 4 EFCYHC 9
EF +HC
Sbjct: 79 EFAFHC 84
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 FCYH 8
FCYH
Sbjct: 766 FCYH 769
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 379 CGGEFFY 385
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GTEFCYHC 9
+E C++C
Sbjct: 65 ASELCFYC 72
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GTEFCYHC 9
+E C++C
Sbjct: 65 ASELCFYC 72
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 FCYHC 9
F YHC
Sbjct: 760 FSYHC 764
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CG---TEFCYH 8
CG ++CYH
Sbjct: 328 CGLSLQDYCYH 338
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 CG---TEFCYH 8
CG ++CYH
Sbjct: 328 CGLSLQDYCYH 338
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CG---TEFCYH 8
CG ++CYH
Sbjct: 328 CGLSLQDYCYH 338
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CG---TEFCYH 8
CG ++CYH
Sbjct: 328 CGLSLQDYCYH 338
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 CG---TEFCYH 8
CG ++CYH
Sbjct: 328 CGLSLQDYCYH 338
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 388 CGGEFFY 394
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 376 CGGEFFY 382
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 373 CGGEFFY 379
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 372 CGGEFFY 378
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 376 CGGEFFY 382
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 380 CGGEFFY 386
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 376 CGGEFFY 382
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 371 CGGEFFY 377
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 374 CGGEFFY 380
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 389 CGGEFFY 395
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 381 CGGEFFY 387
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 381 CGGEFFY 387
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 376 CGGEFFY 382
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 383 CGGEFFY 389
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 374 CGGEFFY 380
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 388 CGGEFFY 394
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 373 CGGEFFY 379
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 376 CGGEFFY 382
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 387 CGGEFFY 393
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 383 CGGEFFY 389
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CGTEFCY 7
CG EF Y
Sbjct: 378 CGGEFFY 384
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 FCYH 8
FCYH
Sbjct: 694 FCYH 697
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CGTEFCYH 8
C TE YH
Sbjct: 3582 CETETTYH 3589
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 336 EYCLHAK 342
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 338 EYCLHAK 344
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 339 EYCLHAK 345
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 339 EYCLHAK 345
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 CGTEFCYHCK 10
CG+E H K
Sbjct: 2032 CGSEITGHVK 2041
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 58 EYCLHAK 64
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 58 EYCLHAK 64
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 58 EYCLHAK 64
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 4 EFCYHCK 10
E+C H K
Sbjct: 58 EYCLHAK 64
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 3 TEFCYHC 9
TEF ++C
Sbjct: 262 TEFLHYC 268
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TEFCYHC 9
TEF ++C
Sbjct: 262 TEFLHYC 268
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 TEFCYHC 9
TEF ++C
Sbjct: 258 TEFLHYC 264
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TEFCYHC 9
TEF ++C
Sbjct: 262 TEFLHYC 268
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 3 TEFCYHC 9
TEF ++C
Sbjct: 262 TEFLHYC 268
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 CGTEFCYHCK 10
CG EF ++CK
Sbjct: 371 CGGEF-FYCK 379
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 FCYH 8
+CYH
Sbjct: 344 YCYH 347
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 5 FCYH 8
+CYH
Sbjct: 281 YCYH 284
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|TAT_HV2RO|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 6 CYHCK 10
CYHC+
Sbjct: 60 CYHCQ 64
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CGTEFCY 7
CG +C+
Sbjct: 505 CGPVYCF 511
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CGTEFCY 7
CG +C+
Sbjct: 505 CGPVYCF 511
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 CGTEFCYHCK 10
CG E H K
Sbjct: 2031 CGAEITGHVK 2040
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|TAT_HV2CA|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 6 CYHCK 10
CYHC+
Sbjct: 63 CYHCQ 67
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 FCYH 8
+CYH
Sbjct: 353 YCYH 356
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CGTEFCYHCK 10
CG E H K
Sbjct: 2031 CGAEITGHVK 2040
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 CGTEFCY 7
CG +C+
Sbjct: 505 CGPVYCF 511
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 CGTEFCY 7
CG +C+
Sbjct: 504 CGPVYCF 510
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 CGTEFCYHCK 10
CG E H K
Sbjct: 2031 CGAEITGHVK 2040
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 5 FCYHCK 10
CY CK
Sbjct: 193 LCYLCK 198
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CGTEFCY 7
CG +C+
Sbjct: 505 CGPVYCF 511
51|Sequence|251|260|CYHCKQIWHP
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YHCKQIWH 9
Y CKQI H
Sbjct: 160 YACKQILH 167
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 2 YHCKQIWH 9
Y CKQI H
Sbjct: 160 YACKQILH 167
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YHCKQIWH 9
Y CKQI H
Sbjct: 160 YACKQILH 167
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 HC------KQIWHP 10
HC +QI+HP
Sbjct: 235 HCLQGENWRQIYHP 248
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 HC------KQIWHP 10
HC +QI+HP
Sbjct: 235 HCLQGENWRQIYHP 248
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 HC------KQIWHP 10
HC +QI+HP
Sbjct: 235 HCLQGENWRQIYHP 248
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 HC------KQIWHP 10
HC +QI+HP
Sbjct: 235 HCLQGENWRQIYHP 248
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 CYHCKQIWH 9
C+ C Q+ H
Sbjct: 351 CFRCGQVGH 359
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 CYHCKQIWH 9
C+ C Q+ H
Sbjct: 351 CFRCGQVGH 359
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 3 HCKQIW 8
HC IW
Sbjct: 219 HCDYIW 224
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 HCKQIW 8
HC IW
Sbjct: 216 HCDYIW 221
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 CYHCKQIWH 9
C+ C Q+ H
Sbjct: 351 CFRCGQVGH 359
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 CYHCKQIWH 9
CY WH
Sbjct: 1698 CYLVSTAWH 1706
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 CYHCKQIWH 9
CY WH
Sbjct: 1697 CYLVSTAWH 1705
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 CYHCKQIWH 9
CY WH
Sbjct: 1697 CYLVSTAWH 1705
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 3 HCKQIW 8
HC IW
Sbjct: 215 HCDYIW 220
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 HCKQIW 8
HC IW
Sbjct: 216 HCDYIW 221
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 3 HCKQIW 8
HC IW
Sbjct: 215 HCDYIW 220
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CYHCKQIWHP 10
CY+ + W P
Sbjct: 416 CYNKRAYWVP 425
Query: 1 CYHCKQ 6
C HC Q
Sbjct: 1729 CKHCGQ 1734
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 1 CYHCKQI 7
CY CK +
Sbjct: 194 CYLCKHL 200
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 3 HCKQIW 8
HC IW
Sbjct: 221 HCAYIW 226
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 3 HCKQIW 8
HC IW
Sbjct: 219 HCSYIW 224
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 3 HCKQIW 8
HC IW
Sbjct: 217 HCDYIW 222
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 3 HCKQIW 8
HC IW
Sbjct: 221 HCAYIW 226
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 HCKQIW 8
HC IW
Sbjct: 218 HCDYIW 223
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CYHCKQIWHP 10
CY+ + W P
Sbjct: 416 CYNKRAYWVP 425
Query: 1 CYHCKQ 6
C HC Q
Sbjct: 1729 CKHCGQ 1734
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 HCKQIW 8
HC IW
Sbjct: 217 HCDYIW 222
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 HCKQIW 8
HC IW
Sbjct: 218 HCDYIW 223
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 4 CKQIWHP 10
CKQ HP
Sbjct: 566 CKQPTHP 572
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 3 HCKQIW 8
HC IW
Sbjct: 214 HCAYIW 219
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 3 HCKQIW 8
HC IW
Sbjct: 217 HCAYIW 222
>sp|VE6_HPV23|PROTEIN E6|Human papillomavirus 23
Query: 1 CYHCKQI 7
C HCK+I
Sbjct: 150 CRHCKEI 156
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 HCKQIW 8
HC +W
Sbjct: 220 HCSYVW 225
>sp|NSP1A_ROTGA|NON-STRUCTURAL protein 1, peptide 1|Rotavirus B (isolate
Query: 1 CYHCKQI 7
CY C+++
Sbjct: 63 CYLCRRL 69
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 3 HCKQIW 8
HC +W
Sbjct: 216 HCDYVW 221
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 3 HCKQIW 8
HC +W
Sbjct: 217 HCDYVW 222
>sp|VE6_HPV30|PROTEIN E6|Human papillomavirus 30
Query: 1 CYHCKQIWHP 10
CY C+Q P
Sbjct: 106 CYRCQQPLTP 115
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HCKQIWHP 10
HC + HP
Sbjct: 98 HCYETSHP 105
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HCKQIWHP 10
HC + HP
Sbjct: 98 HCYETSHP 105
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 3 HCKQIW 8
HC +W
Sbjct: 216 HCDYVW 221
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 4 CKQIW 8
CK +W
Sbjct: 185 CKHLW 189
>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CKQIW 8
CK +W
Sbjct: 185 CKHLW 189
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 3 HCKQIW 8
HC IW
Sbjct: 216 HCFYIW 221
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CYHCK 5
CY CK
Sbjct: 497 CYVCK 501
52|Sequence|256|265|QIWHPNQTCD
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QIWHPNQ 7
Q WHPNQ
Sbjct: 39 QTWHPNQ 45
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 QIWHPNQ 7
Q WHPNQ
Sbjct: 39 QTWHPNQ 45
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IWHPNQTCD 10
+W PNQ D
Sbjct: 407 LWTPNQITD 415
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 IWHPNQTCD 10
+W PNQ D
Sbjct: 407 LWTPNQITD 415
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 QIWHP 5
++WHP
Sbjct: 1194 EVWHP 1198
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 QIWHP 5
++WHP
Sbjct: 1194 EVWHP 1198
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 QIWHP 5
++WHP
Sbjct: 1194 EVWHP 1198
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 QIWHP 5
++WHP
Sbjct: 1194 EVWHP 1198
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 4 HPNQTC 9
HPN TC
Sbjct: 333 HPNITC 338
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 4 HPNQTC 9
HPN TC
Sbjct: 333 HPNITC 338
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 4 HPNQTCD 10
+PN +CD
Sbjct: 226 NPNMSCD 232
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 HPNQTCD 10
+PN +CD
Sbjct: 226 NPNMSCD 232
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 2 IWHPNQ 7
IWH N+
Sbjct: 270 IWHSNE 275
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 IWHPNQ 7
+WH NQ
Sbjct: 1968 VWHINQ 1973
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 5 PNQTCD 10
P+QTC+
Sbjct: 4140 PDQTCN 4145
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 IWHPNQ 7
+WH NQ
Sbjct: 1968 VWHINQ 1973
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 PNQTCD 10
P+QTC+
Sbjct: 4140 PDQTCN 4145
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QIWHPNQT 8
Q W P QT
Sbjct: 339 QEWKPGQT 346
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QIWHPNQT 8
Q W P QT
Sbjct: 339 QEWKPGQT 346
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HPNQTC 9
HP Q C
Sbjct: 618 HPEQIC 623
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HPNQTC 9
HP Q C
Sbjct: 618 HPEQIC 623
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 HPNQTCD 10
HP + CD
Sbjct: 1396 HPKKKCD 1402
Query: 3 WHPNQT 8
WH N+T
Sbjct: 419 WHINRT 424
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IWHPNQTCD 10
+W P+Q D
Sbjct: 408 LWTPDQITD 416
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 2 IWHPNQT 8
++HPN T
Sbjct: 221 LYHPNST 227
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 2 IWHPNQT 8
++HPN T
Sbjct: 221 LYHPNST 227
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IWHPN 6
IW+PN
Sbjct: 262 IWYPN 266
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 1732 HPSDLCD 1738
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77AB|NUCLEOPROTEIN A virus (strain A/USSR/90/1977
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77AA|NUCLEOPROTEIN A virus (strain A/Brazil/11/1978
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 2 IWHPN 6
IWH N
Sbjct: 138 IWHSN 142
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 1732 HPSDLCD 1738
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 1732 HPSDLCD 1738
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 533 NPNMICD 539
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 HPNQTCD 10
+PN CD
Sbjct: 541 NPNMICD 547
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IWHPN 6
IW+PN
Sbjct: 262 IWYPN 266
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 QIWHP 5
+ WHP
Sbjct: 1199 ETWHP 1203
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 QIWHP 5
+ WHP
Sbjct: 1199 ETWHP 1203
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 5 PNQTCD 10
P+Q CD
Sbjct: 452 PSQMCD 457
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 QIWHPN 6
+IWH N
Sbjct: 2071 EIWHVN 2076
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 QIWHPN 6
Q+W PN
Sbjct: 302 QVWLPN 307
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IWHPNQTC 9
++H NQ C
Sbjct: 233 VYHRNQWC 240
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IWHPNQTC 9
++H NQ C
Sbjct: 233 VYHRNQWC 240
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 IWHPNQT 8
+W PN++
Sbjct: 19 LWRPNES 25
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 IWHPNQT 8
+W PN++
Sbjct: 19 MWRPNES 25
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 5 PNQTCD 10
P Q CD
Sbjct: 598 PEQNCD 603
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 WHPNQT 8
WH N+T
Sbjct: 419 WHINRT 424
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 WHPNQT 8
WH N+T
Sbjct: 420 WHINRT 425
53|Sequence|261|270|NQTCDAARQE
>sp|RL13_HCMVM|MEMBRANE protein RL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NQTCDAARQE 10
N+TCD R E
Sbjct: 214 NRTCDRKRTE 223
>sp|GL_EBVG|ENVELOPE glycoprotein L|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NQTCDA 6
NQTCD
Sbjct: 53 NQTCDG 58
>sp|GL_EBVB9|ENVELOPE glycoprotein L|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NQTCDA 6
NQTCD
Sbjct: 53 NQTCDG 58
>sp|GL_EBVA8|ENVELOPE glycoprotein L|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NQTCDA 6
NQTCD
Sbjct: 53 NQTCDG 58
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 NQTCDAARQE 10
+QTCD++ E
Sbjct: 391 SQTCDSSDDE 400
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 NQTCDAA 7
NQT DAA
Sbjct: 183 NQTTDAA 189
>sp|UL39_HCMVA|UNCHARACTERIZED protein UL39|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NQTCD 5
N+TCD
Sbjct: 15 NRTCD 19
54|Sequence|266|275|AARQERAQSL
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 2 ARQERAQ 8
ARQER+Q
Sbjct: 196 ARQERSQ 202
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ARQERAQ 8
ARQER+Q
Sbjct: 196 ARQERSQ 202
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 2 ARQERAQ 8
ARQER+Q
Sbjct: 196 ARQERSQ 202
55|Sequence|271|280|RAQSLRLRTI
>sp|PHOSP_RABVN|PHOSPHOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 RAQSLRLRTI 10
++QSL+ RT+
Sbjct: 165 KSQSLKSRTM 174
56|Sequence|276|285|RLRTIRSSSI
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 LRTIRSSS 9
LRT+RSS+
Sbjct: 711 LRTVRSSN 718
57|Sequence|281|290|RSSSISYSQE
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 RSSSISYSQE 10
R+SSISY+ E
Sbjct: 298 RASSISYNIE 307
58|Sequence|286|295|SYSQESGAAA
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 SYSQESGAA 9
++ Q+SGAA
Sbjct: 859 AFGQQSGAA 867
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SYSQESGAA 9
++ Q+SGAA
Sbjct: 861 AFGQQSGAA 869
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 SYSQESGAA 9
++ Q+SGAA
Sbjct: 852 AFGQQSGAA 860
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 SYSQESGAA 9
++ Q+SGAA
Sbjct: 862 AFEQQSGAA 870
59|Sequence|291|300|SGAAADDIKP
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SGAAADDI 8
SG+ ADDI
Sbjct: 513 SGSCADDI 520
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SGAAADDI 8
SG+ ADDI
Sbjct: 513 SGSCADDI 520
60|Sequence|296|305|DDIKPCPRCA
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 DIKPCPR 8
++KPCPR
Sbjct: 1613 NLKPCPR 1619
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 KPCPRC 9
+PCP C
Sbjct: 1148 EPCPEC 1153
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 KPCPRC 9
+PCP C
Sbjct: 1148 EPCPEC 1153
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 KPCPRC 9
KP PRC
Sbjct: 300 KPAPRC 305
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 3 IKPCPRCA 10
+K CP+C+
Sbjct: 16 LKGCPKCS 23
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 DDIKPCPRC 9
D+IK C +C
Sbjct: 669 DNIKDCVKC 677
Query: 5 PCPRC 9
PCP C
Sbjct: 369 PCPAC 373
Query: 1 DDIKPCPR 8
DD CPR
Sbjct: 3273 DDTVYCPR 3280
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 DDIKPCPR 8
DD+ CPR
Sbjct: 3296 DDVVYCPR 3303
>sp|NP1_HBOC4|NON-STRUCTURAL protein NP-1|Human bocavirus 4 (HBoV4) (Human
Query: 6 CPRC 9
CPRC
Sbjct: 171 CPRC 174
>sp|NP1_HBOC2|NON-STRUCTURAL protein NP-1|Human bocavirus 2 (HBoV2) (Human
Query: 6 CPRC 9
CPRC
Sbjct: 171 CPRC 174
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DDIKPCPRC 9
D+IK C +C
Sbjct: 669 DNIKDCVKC 677
Query: 5 PCPRC 9
PCP C
Sbjct: 369 PCPAC 373
Query: 1 DDIKPCPR 8
DD CPR
Sbjct: 3273 DDTVYCPR 3280
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 6 CPRCA 10
CPRCA
Sbjct: 30 CPRCA 34
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 3 IKPCP 7
IKPCP
Sbjct: 241 IKPCP 245
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DDIKPCPR 8
DD+ CPR
Sbjct: 3296 DDVVYCPR 3303
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 4 KPCPRCA 10
K CP+C+
Sbjct: 17 KGCPKCS 23
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 KPCPR 8
+PCPR
Sbjct: 112 RPCPR 116
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 DDIKPCP 7
DDIK CP
Sbjct: 266 DDIKWCP 272
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 PCPRC 9
PCP C
Sbjct: 158 PCPNC 162
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 5 PCPRC 9
PCP C
Sbjct: 158 PCPNC 162
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PCPRC 9
PCP C
Sbjct: 158 PCPNC 162
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PCPRC 9
PCP C
Sbjct: 158 PCPNC 162
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 6 CPRCA 10
CPRCA
Sbjct: 1175 CPRCA 1179
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 3 IKPCPRCA 10
++P P+CA
Sbjct: 855 LQPTPQCA 862
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 67 KLCPKC 72
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 60 KLCPKC 65
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 67 KLCPKC 72
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 PCPRC 9
PCP C
Sbjct: 52 PCPFC 56
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 60 KLCPKC 65
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 6 CPRCA 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 6 CPRCA 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 IKP---CPRCA 10
+KP CP+C+
Sbjct: 1144 LKPYEQCPQCS 1154
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 IKP---CPRCA 10
+KP CP+C+
Sbjct: 1144 LKPYEQCPQCS 1154
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 6 CPRCA 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|VE7_HPV29|PROTEIN E7|Human papillomavirus 29
Query: 6 CPRCA 10
CPRCA
Sbjct: 86 CPRCA 90
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 3 IKPCPRCA 10
I P P C+
Sbjct: 236 ISPTPNCS 243
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 3 IKPCPRCA 10
I P P C+
Sbjct: 236 ISPTPNCS 243
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 6 CPRCA 10
CP+C+
Sbjct: 19 CPKCS 23
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 PCPRCA 10
P PRC+
Sbjct: 1681 PSPRCS 1686
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 PCPRCA 10
P PRC+
Sbjct: 1682 PSPRCS 1687
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 DIKPC 6
DI+PC
Sbjct: 205 DIEPC 209
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 DIKPC 6
DI+PC
Sbjct: 205 DIEPC 209
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 DIKPC 6
DI+PC
Sbjct: 205 DIEPC 209
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 DIKPC 6
DI+PC
Sbjct: 205 DIEPC 209
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 DIKPC 6
DI+PC
Sbjct: 205 DIEPC 209
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 64 KLCPKC 69
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 IKPCPR 8
+KPC R
Sbjct: 619 VKPCVR 624
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 67 KLCPKC 72
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 67 KLCPKC 72
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 67 KLCPKC 72
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 4 KPCPRC 9
K CP+C
Sbjct: 59 KLCPKC 64
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 PCPR 8
PCPR
Sbjct: 408 PCPR 411
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 6 CPRCA 10
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 4 KPCPRC 9
K CP C
Sbjct: 67 KLCPNC 72
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 4 KPCPRC 9
K CP C
Sbjct: 57 KLCPNC 62
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DDIKPCPRC 9
D ++P P C
Sbjct: 362 DCVRPVPVC 370
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 4 KPCPRC 9
K CP C
Sbjct: 67 KLCPNC 72
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 4 KPCPRC 9
K CP C
Sbjct: 67 KLCPNC 72
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 4 KPCPRC 9
K CP C
Sbjct: 60 KLCPNC 65
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 4 KPCPRC 9
K CP C
Sbjct: 67 KLCPNC 72
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 4 KPCPRC 9
K CP C
Sbjct: 60 KLCPNC 65
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 4 KPCPRC 9
K CP+C
Sbjct: 52 KLCPKC 57
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 IKPCPRC 9
++P PRC
Sbjct: 84 LQPYPRC 90
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 DIKPCPRC 9
D++P RC
Sbjct: 221 DVQPVHRC 228
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 DIKPCPRC 9
D++P RC
Sbjct: 221 DVQPVHRC 228
61|Sequence|301|310|CPRCAAYIIK
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 CPRCAA 6
CP+C+A
Sbjct: 19 CPKCSA 24
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 CPRCAA 6
CP+C+A
Sbjct: 19 CPKCSA 24
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 CPRCAA 6
CP+C+A
Sbjct: 19 CPKCSA 24
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 1 CPRCAA 6
CP+C+A
Sbjct: 19 CPKCSA 24
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 CPRCAA 6
CP+C+A
Sbjct: 19 CPKCSA 24
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 CPRCAA 6
CP+C+A
Sbjct: 19 CPKCSA 24
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 CPRCAAYIIK 10
CPRCA + K
Sbjct: 30 CPRCALKLPK 39
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CPRCA 5
CPRCA
Sbjct: 1175 CPRCA 1179
>sp|VE7_HPV07|PROTEIN E7|Human papillomavirus 7
Query: 1 CPRCAA 6
CP CAA
Sbjct: 104 CPNCAA 109
>sp|VE7_HPV40|PROTEIN E7|Human papillomavirus 40
Query: 1 CPRCAA 6
CP CAA
Sbjct: 104 CPNCAA 109
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 RCAAYI 8
RCAA+I
Sbjct: 2361 RCAAFI 2366
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 CAAYII 9
CAAY+I
Sbjct: 2830 CAAYLI 2835
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 CAAYII 9
CAAY+I
Sbjct: 2830 CAAYLI 2835
Query: 1 CPRCAAYII 9
C RC A I+
Sbjct: 5437 CYRCPAEIV 5445
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 CPRCAA 6
CP C A
Sbjct: 1087 CPSCGA 1092
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPRCAAYII 9
C RC A I+
Sbjct: 5765 CRRCPAEIV 5773
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 CPRCAA 6
CP C A
Sbjct: 1087 CPSCGA 1092
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 1 CPRCAA 6
CP C A
Sbjct: 626 CPECRA 631
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 CPRCAA 6
CP C A
Sbjct: 625 CPECRA 630
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CPRCAAYII 9
C RC A I+
Sbjct: 5742 CRRCPAEIV 5750
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 CPRCAAYII 9
CP+ +Y++
Sbjct: 426 CPQLLSYVV 434
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 RCAAYI 8
RCAA++
Sbjct: 660 RCAAFV 665
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CPRCA 5
CP+CA
Sbjct: 1175 CPKCA 1179
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 RCAAYI 8
RCAA++
Sbjct: 660 RCAAFV 665
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 CPRCAA 6
CP C A
Sbjct: 11 CPLCTA 16
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CPRCAAYII 9
C RC A I+
Sbjct: 5412 CYRCPAEIV 5420
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 CPRCAA 6
CP C+A
Sbjct: 121 CPACSA 126
>sp|VE7_HPV41|PROTEIN E7|Human papillomavirus type 41
Query: 1 CPRCAAYI 8
CP C A I
Sbjct: 62 CPFCQAII 69
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 CPRCAA 6
CP CA+
Sbjct: 761 CPYCAS 766
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CPRCAA 6
CP C A
Sbjct: 144 CPTCTA 149
62|Sequence|306|315|AYIIKMNDGS
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YIIKMNDG 9
Y+I++NDG
Sbjct: 147 YMIRVNDG 154
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YIIKMNDG 9
Y+I++NDG
Sbjct: 147 YMIRVNDG 154
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 AYIIKMND 8
A++IK ND
Sbjct: 171 AHVIKTND 178
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 765 YIIKKND 771
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 YIIKMNDGS 10
+I+K DGS
Sbjct: 723 FILKKKDGS 731
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 YIIKMNDGS 10
+I+K DGS
Sbjct: 723 FILKKKDGS 731
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YIIKMND 8
YIIK ND
Sbjct: 764 YIIKKND 770
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 1 AYIIKMND 8
+YI++M D
Sbjct: 154 SYILRMGD 161
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 AYIIKMND 8
Y IK ND
Sbjct: 1175 GYFIKQND 1182
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 AYIIKMND 8
Y IK ND
Sbjct: 1175 GYFIKQND 1182
63|Sequence|311|320|MNDGSCNHMT
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1052 DGSCNRQS 1059
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1054 DGSCNRQS 1061
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1051 DGSCNRQS 1058
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1053 DGSCNRQS 1060
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1054 DGSCNRQS 1061
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1052 DGSCNRQS 1059
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1052 DGSCNRQS 1059
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1053 DGSCNRQS 1060
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1052 DGSCNRTS 1059
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1053 DGSCNKQS 1060
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCNHMT 10
DGSCN +
Sbjct: 1053 DGSCNRAS 1060
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 DGSCN 7
DGSCN
Sbjct: 1051 DGSCN 1055
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 MNDGSCNHMT 10
+ D CNH+T
Sbjct: 222 LADRICNHVT 231
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 MNDGSCNHMT 10
+ D CNH+T
Sbjct: 218 LADRICNHVT 227
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 MNDGSCNHMT 10
+ D CNH+T
Sbjct: 218 LADRICNHVT 227
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 MNDGSCNHMT 10
+ D CNH+T
Sbjct: 222 LADRICNHVT 231
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X])
Query: 4 GSCNHM 9
G+CNH+
Sbjct: 87 GTCNHV 92
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 4 GSCNHM 9
G+CNH+
Sbjct: 87 GTCNHV 92
>sp|VE7_HPV19|PROTEIN E7|Human papillomavirus 19
Query: 4 GSCNH 8
G+CNH
Sbjct: 95 GNCNH 99
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 NDGSCNHM 9
NDG HM
Sbjct: 177 NDGVVQHM 184
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 NDGSCNHM 9
NDG HM
Sbjct: 177 NDGVVQHM 184
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 6 CNHMT 10
CNH+T
Sbjct: 215 CNHLT 219
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 CNHMT 10
CNH+T
Sbjct: 215 CNHLT 219
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 2 NDGSCNHM 9
+DGSC+ +
Sbjct: 151 DDGSCSSL 158
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 2 NDGSCNHM 9
+DGSC+ +
Sbjct: 151 DDGSCSSL 158
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 3 DGSCNHMT 10
+GSCN +T
Sbjct: 332 EGSCNPVT 339
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 3 DGSCNHMT 10
+GSCN +T
Sbjct: 332 EGSCNPVT 339
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 3 DGSCNHMT 10
+GSCN +T
Sbjct: 332 EGSCNPVT 339
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 DGSCNHMT 10
+GSCN +T
Sbjct: 332 EGSCNPVT 339
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 DGSCNHM 9
DG C H+
Sbjct: 459 DGHCVHL 465
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 6 CNHMT 10
CNH+T
Sbjct: 215 CNHLT 219
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 GSCNH 8
G CNH
Sbjct: 995 GICNH 999
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 GSCNH 8
G CNH
Sbjct: 995 GICNH 999
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 GSCNH 8
G CNH
Sbjct: 995 GICNH 999
64|Sequence|316|325|CNHMTCAVCG
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CNHMTCAVC 9
CN TC +C
Sbjct: 2404 CNSSTCMMC 2412
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CNHMTCAVC 9
CN TC +C
Sbjct: 2404 CNSSTCMMC 2412
Query: 1 CNHMTCAVCG 10
CN T CG
Sbjct: 5332 CNSQTSLRCG 5341
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 HMTCAVC 9
H TC +C
Sbjct: 1174 HETCVIC 1180
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 HMTCAVC 9
H TC +C
Sbjct: 1174 HETCVIC 1180
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 HMTCAVC 9
H TC +C
Sbjct: 1174 HETCVIC 1180
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 CNHMTC 6
CN M C
Sbjct: 591 CNEMVC 596
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 314 HTTCSVNG 321
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 HMTCAVCG 10
H TC+V G
Sbjct: 315 HTTCSVNG 322
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 CNHMTCA 7
CN TCA
Sbjct: 1087 CNDPTCA 1093
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CNHMTCAV 8
CN TC+V
Sbjct: 395 CNGTTCSV 402
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 CNHMTCAVCG 10
CN CA+ G
Sbjct: 214 CNDWICAIFG 223
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 CNHMTCAVCG 10
C+H+ CG
Sbjct: 208 CSHICTPACG 217
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NHMTCA 7
NH TCA
Sbjct: 389 NHDTCA 394
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NHMTCA 7
NH TCA
Sbjct: 389 NHDTCA 394
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 CNHMTCAV 8
CN + C V
Sbjct: 140 CNDLKCVV 147
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CNHMTCAV 8
CN + C V
Sbjct: 140 CNDLKCVV 147
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CNHMTCAV 8
CN + C V
Sbjct: 140 CNDLKCVV 147
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CNHMTCAV 8
CN + C V
Sbjct: 140 CNDLKCVV 147
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 CNHMTCAV 8
CN + C V
Sbjct: 142 CNDLKCVV 149
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 3 HMTCAVCG 10
HM +CG
Sbjct: 89 HMPALICG 96
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 1 CNHMTCAVC 9
C H C VC
Sbjct: 35 CLHDFCFVC 43
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 NHMTCAVC 9
NH A+C
Sbjct: 607 NHFLLAIC 614
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CNHMTCAVCG 10
CN+ TC G
Sbjct: 236 CNNNTCNGTG 245
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 NHMTCAVCG 10
NH C++ G
Sbjct: 2229 NHFICSLRG 2237
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 NHMTCAVCG 10
NH C++ G
Sbjct: 2229 NHFICSLRG 2237
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 NHMTCAVCG 10
NH C++ G
Sbjct: 2229 NHFICSLRG 2237
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 NHMTCAVCG 10
NH C++ G
Sbjct: 2229 NHFICSLRG 2237
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 NHMTCAVCG 10
NH C++ G
Sbjct: 2229 NHFICSLRG 2237
>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NHMTCAVCG 10
NH C +CG
Sbjct: 74 NHNNCELCG 82
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 2 NHMTCAVCG 10
NHM CG
Sbjct: 469 NHMGICSCG 477
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 2 NHMTCAV 8
N+MTC +
Sbjct: 181 NNMTCQI 187
65|Sequence|321|330|CAVCGCEFCW
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 CAVCGCEFC 9
C VC C++C
Sbjct: 47 CKVCPCDYC 55
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 VCGCEFC 9
VC CE C
Sbjct: 1639 VCPCEIC 1645
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 CAVCGCEFC 9
CAVC E C
Sbjct: 201 CAVCFEELC 209
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 CAVCGCEFC 9
CAVC E C
Sbjct: 196 CAVCFEELC 204
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 CAVCGCEFC 9
CAVC E C
Sbjct: 197 CAVCFEELC 205
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 CAVCGCEFC 9
CAVC E C
Sbjct: 197 CAVCFEELC 205
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CAVCGCEFC 9
C++C C FC
Sbjct: 765 CSLCVCPFC 773
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 CGCEFC 9
CGCE C
Sbjct: 541 CGCEEC 546
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CAVCGCEFCW 10
C+ GC FC+
Sbjct: 2392 CSKSGCLFCY 2401
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CAVCGCEFCW 10
C+ GC FC+
Sbjct: 2392 CSKSGCLFCY 2401
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 CAVCGCEFC 9
CAVC E C
Sbjct: 201 CAVCFEELC 209
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CAVCGC 6
C VCGC
Sbjct: 4049 CKVCGC 4054
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CAVCGC 6
C VCGC
Sbjct: 4049 CKVCGC 4054
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 VCGCEFC 9
VC CE C
Sbjct: 1649 VCICEIC 1655
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 AVCGC 6
AVCGC
Sbjct: 16 AVCGC 20
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 AVCGC 6
AVCGC
Sbjct: 16 AVCGC 20
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 AVCGC 6
AVCGC
Sbjct: 28 AVCGC 32
>sp|ORF23_TTVV7|PROBABLE protein VP2|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 AVCGC 6
AVCGC
Sbjct: 28 AVCGC 32
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CAVCGC 6
C VCGC
Sbjct: 4024 CNVCGC 4029
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CAVCGC 6
C VCGC
Sbjct: 4024 CNVCGC 4029
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CAVCGCEFC 9
CA+C E C
Sbjct: 199 CAICFEELC 207
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 AVCGC 6
AVCGC
Sbjct: 16 AVCGC 20
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CAVCGCEFCW 10
C GC FC+
Sbjct: 2480 CNKAGCLFCY 2489
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CAVCGCEFCW 10
C GC FC+
Sbjct: 2450 CNKAGCLFCY 2459
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CAVCGCEFCW 10
C GC FC+
Sbjct: 2480 CNKAGCLFCY 2489
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CAVCGCEFCW 10
C GC FC+
Sbjct: 2430 CNKAGCLFCY 2439
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CAVCGCEFCW 10
C GC FC+
Sbjct: 2430 CNKAGCLFCY 2439
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CAVCGCEFCW 10
C GC FC+
Sbjct: 2450 CNKAGCLFCY 2459
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VCGCEFCW 10
+C EF W
Sbjct: 331 ICSNEFSW 338
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 3 VCGCEFC 9
+C C FC
Sbjct: 461 ICVCNFC 467
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 6 CEFC 9
CEFC
Sbjct: 599 CEFC 602
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 CEFC 9
CEFC
Sbjct: 599 CEFC 602
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 6 CEFC 9
CEFC
Sbjct: 599 CEFC 602
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 AVCGCEFCW 10
+ CG ++ W
Sbjct: 167 SFCGSQYSW 175
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 4 CGCE 7
CGCE
Sbjct: 224 CGCE 227
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 4 CGCEFCW 10
C C++ W
Sbjct: 463 CLCQYLW 469
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CGCEFCW 10
C C++ W
Sbjct: 463 CLCQYLW 469
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CGCEFCW 10
C C++ W
Sbjct: 464 CLCQYLW 470
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 CGCEFCW 10
C C++ W
Sbjct: 464 CLCQYLW 470
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 4 CGCEFCW 10
C C++ W
Sbjct: 464 CLCQYLW 470
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CAVCGCE 7
CA GC+
Sbjct: 134 CAAVGCQ 140
Query: 1 CAVCGCEFC 9
CA CE C
Sbjct: 467 CAAGLCEAC 475
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CAVCGCE 7
CA GC+
Sbjct: 134 CAAVGCQ 140
Query: 1 CAVCGCEFC 9
CA CE C
Sbjct: 467 CAAGLCEAC 475
>sp|ORF24_TTVV2|ORF2/4 protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 AVCGC 6
A+CGC
Sbjct: 26 AMCGC 30
>sp|ORF24_TTVV1|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (strain VT416)
Query: 2 AVCGC 6
A+CGC
Sbjct: 26 AMCGC 30
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 2 AVCGC 6
A+CGC
Sbjct: 26 AMCGC 30
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 2 AVCGC 6
A+CGC
Sbjct: 26 AMCGC 30
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 CGCEFC 9
C CE C
Sbjct: 1649 CLCEIC 1654
>sp|ORF2_TTVVG|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Human/Ghana/GH1/1996)
Query: 2 AVCGC 6
A+CGC
Sbjct: 56 AMCGC 60
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 CEFC 9
CEFC
Sbjct: 341 CEFC 344
Query: 1 CAVCG 5
C VCG
Sbjct: 4370 CTVCG 4374
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 CEFC 9
CEFC
Sbjct: 341 CEFC 344
Query: 1 CAVCG 5
C VCG
Sbjct: 4370 CTVCG 4374
>sp|GLYC_HRSVB|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 CAVCG 5
C++CG
Sbjct: 173 CSICG 177
>sp|GLYC_HRSV8|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 CAVCG 5
C++CG
Sbjct: 173 CSICG 177
>sp|GLYC_HRSV1|MAJOR surface glycoprotein G|Human respiratory syncytial virus B
Query: 1 CAVCG 5
C++CG
Sbjct: 173 CSICG 177
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 CAVCGC 6
C +C C
Sbjct: 1177 CVICEC 1182
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 CAVCGC 6
C +C C
Sbjct: 1177 CVICEC 1182
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 CAVCGC 6
C +C C
Sbjct: 1177 CVICEC 1182
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 AVCGC 6
A CGC
Sbjct: 27 AFCGC 31
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 2 AVCGC 6
A CGC
Sbjct: 27 AFCGC 31
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 CAVCGCE 7
CA CG +
Sbjct: 1051 CAQCGAD 1057
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 GCEFCW 10
G E CW
Sbjct: 74 GAEPCW 79
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 4 CGCEFCW 10
CGC + +
Sbjct: 1147 CGCPYIY 1153
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate
Query: 2 AVCGC 6
A+CGC
Sbjct: 108 AMCGC 112
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 5 GCEFC 9
GCE C
Sbjct: 1036 GCELC 1040
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 CAVCG 5
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 CAVCG 5
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 CAVCG 5
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 CAVCG 5
C VCG
Sbjct: 363 CRVCG 367
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 CAVCG 5
C VCG
Sbjct: 363 CRVCG 367
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CAVCG 5
C VCG
Sbjct: 4347 CTVCG 4351
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 CAVCG 5
C VCG
Sbjct: 4347 CTVCG 4351
66|Sequence|326|335|CEFCWLCMKE
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EFCWLCM 8
EF W+CM
Sbjct: 139 EFIWMCM 145
Query: 5 WLCMKE 10
WLC K+
Sbjct: 287 WLCKKD 292
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EFCWLCM 8
EF W+CM
Sbjct: 139 EFIWMCM 145
Query: 5 WLCMKE 10
WLC K+
Sbjct: 287 WLCKKD 292
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EFCWLCM 8
EF W+CM
Sbjct: 139 EFIWMCM 145
Query: 5 WLCMKE 10
WLC K+
Sbjct: 287 WLCKKD 292
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 4 CWLCMK 9
CWLC K
Sbjct: 127 CWLCWK 132
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 4 CWLCM 8
CWLC+
Sbjct: 311 CWLCL 315
>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CEFCWLCM 8
C FCWL +
Sbjct: 33 CAFCWLVL 40
>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CEFCWLCM 8
C FCWL +
Sbjct: 33 CAFCWLVL 40
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 414 CWRCGKE 420
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 414 CWRCGKE 420
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 4 CWLCM 8
CWLC+
Sbjct: 311 CWLCL 315
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 4 CWLCM 8
CWLC+
Sbjct: 311 CWLCL 315
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 415 CWKCGKE 421
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 407 CWKCGKE 413
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 414 CWKCGKE 420
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 412 CWKCGKE 418
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 412 CWKCGKE 418
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 408 CWKCGKE 414
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 416 CWKCGKE 422
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 419 CWKCGKE 425
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 410 CWKCGKE 416
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 414 CWKCGKE 420
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 408 CWKCGKE 414
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 408 CWKCGKE 414
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 410 CWKCGKE 416
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 407 CWKCGKE 413
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 412 CWKCGKE 418
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 412 CWKCGKE 418
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 408 CWKCGKE 414
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 419 CWKCGKE 425
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 410 CWKCGKE 416
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 408 CWKCGKE 414
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 408 CWKCGKE 414
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 413 CWKCGKE 419
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 415 CWKCGKE 421
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 410 CWKCGKE 416
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 416 CWKCGKE 422
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 414 CWKCGKE 420
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 414 CWKCGKE 420
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 390 CWNCGKE 396
Query: 4 CWLCMK 9
CW C K
Sbjct: 411 CWKCGK 416
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 389 CWNCGKE 395
Query: 4 CWLCMK 9
CW C K
Sbjct: 410 CWKCGK 415
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 392 CWNCGKE 398
Query: 4 CWLCMK 9
CW C K
Sbjct: 413 CWKCGK 418
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EFCWLCMKE 10
++ WLC+ E
Sbjct: 389 QYDWLCLTE 397
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EFCWLCMKE 10
++ WLC+ E
Sbjct: 389 QYDWLCLTE 397
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 392 CWNCGKE 398
Query: 4 CWLCMK 9
CW C K
Sbjct: 413 CWKCGK 418
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 390 CWNCGKE 396
Query: 4 CWLCMK 9
CW C K
Sbjct: 411 CWKCGK 416
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 2 EFCWLCMK 9
+FC++C++
Sbjct: 38 DFCFVCIR 45
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 389 CWNCGKE 395
Query: 4 CWLCMK 9
CW C K
Sbjct: 410 CWKCGK 415
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C KE
Sbjct: 391 CWNCGKE 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C K+
Sbjct: 411 CWKCGKQ 417
Query: 4 CWLCMK 9
CW C K
Sbjct: 390 CWNCGK 395
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 FCWL 6
FCWL
Sbjct: 665 FCWL 668
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 FCWL 6
FCWL
Sbjct: 1926 FCWL 1929
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 5 WLCMK 9
W+CM+
Sbjct: 1902 WICMR 1906
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C K+
Sbjct: 411 CWKCGKQ 417
Query: 4 CWLCMK 9
CW C K
Sbjct: 390 CWNCGK 395
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 1 CEFCWL 6
C++CWL
Sbjct: 133 CQYCWL 138
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C K+
Sbjct: 390 CWNCGKQ 396
Query: 4 CWLCMK 9
CW C K
Sbjct: 411 CWKCGK 416
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C K+
Sbjct: 391 CWNCGKD 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 FCWLCMK 9
FC CMK
Sbjct: 148 FCIPCMK 154
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 3 FCWLCMK 9
FC CMK
Sbjct: 138 FCIPCMK 144
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 4 CWLCM 8
CW+CM
Sbjct: 19 CWVCM 23
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 1 CEFCWLCMK 9
C+F +C+K
Sbjct: 366 CKFTEVCLK 374
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 5 WLCMK 9
W+C+K
Sbjct: 1883 WMCLK 1887
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C K+
Sbjct: 390 CWNCGKQ 396
Query: 4 CWLCMK 9
CW C K
Sbjct: 411 CWKCGK 416
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 5 WLCMKE 10
W CM+E
Sbjct: 1970 WPCMEE 1975
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 5 WLCMKE 10
W CM+E
Sbjct: 1966 WPCMEE 1971
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 FCWL 6
FCW+
Sbjct: 2217 FCWM 2220
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 FCWL 6
FCW+
Sbjct: 2213 FCWM 2216
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 FCWL 6
FCW+
Sbjct: 2217 FCWM 2220
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 WLCMK 9
WLC K
Sbjct: 1106 WLCTK 1110
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 1 CEFCW 5
CE+CW
Sbjct: 135 CEYCW 139
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 EFCWL 6
E CWL
Sbjct: 2014 EHCWL 2018
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 EFCWL 6
E CWL
Sbjct: 2013 EHCWL 2017
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 EFCWL 6
E CWL
Sbjct: 2013 EHCWL 2017
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMKE 10
CW C K+
Sbjct: 391 CWNCGKD 397
Query: 4 CWLCMK 9
CW C K
Sbjct: 412 CWKCGK 417
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMK 9
CW C K
Sbjct: 389 CWNCGK 394
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CEFCWLCM 8
CEF C+
Sbjct: 3930 CEFLEFCL 3937
>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CWLCM 8
CW+CM
Sbjct: 19 CWVCM 23
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 EFCWLCMKE 10
++ WLC+++
Sbjct: 90 KWLWLCLED 98
>sp|VE6_HPV54|PROTEIN E6|Human papillomavirus type 54
Query: 4 CWLCMK 9
CWLC K
Sbjct: 105 CWLCHK 110
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 CWLCMK 9
CW C K
Sbjct: 389 CWNCGK 394
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EFCWLC 7
+F WLC
Sbjct: 365 QFRWLC 370
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 EFCWLCM 8
E C+LC+
Sbjct: 104 EGCYLCI 110
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EFCWLC 7
+F WLC
Sbjct: 365 QFRWLC 370
>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 5 WLCMK 9
WLC K
Sbjct: 128 WLCWK 132
67|Sequence|331|340|LCMKEISDLH
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 1 LCMKEISDL 9
+CM +SDL
Sbjct: 21 ICMSTVSDL 29
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 KEISDLH 10
+EISDLH
Sbjct: 466 REISDLH 472
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LCMKEISDLH 10
LC+ E D+H
Sbjct: 144 LCISETFDIH 153
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LCMKEISDLH 10
LC+ E D+H
Sbjct: 144 LCISETFDIH 153
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 LCMKEISD 8
LC E+SD
Sbjct: 449 LCAAEVSD 456
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 CMKEISDL 9
C KEIS L
Sbjct: 299 CYKEISHL 306
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 5 EISDLH 10
E+SD+H
Sbjct: 391 EVSDMH 396
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 EISDLH 10
E+SD+H
Sbjct: 1722 EVSDMH 1727
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CMKEISDLH 10
C KEI+D+
Sbjct: 537 CEKEIADMR 545
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 CMKEISDL 9
C KEI+D+
Sbjct: 533 CEKEIADM 540
68|Sequence|336|345|ISDLHYLSPS
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 SDLHYLSP 9
SD+H LSP
Sbjct: 3153 SDVHGLSP 3160
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 ISDLHYLSP 9
++++HYL P
Sbjct: 142 VNNIHYLDP 150
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 SDLHYLSP 9
+D+H+L P
Sbjct: 2636 TDIHHLEP 2643
>sp|NEP_I67A2|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 ISDLHYL 7
+ DLHYL
Sbjct: 52 MGDLHYL 58
>sp|NEP_I61A1|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 ISDLHYL 7
+ DLHYL
Sbjct: 52 MGDLHYL 58
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 DLHYLS 8
D+HYLS
Sbjct: 149 DIHYLS 154
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 ISDLHYLSP 9
I HYL+P
Sbjct: 358 IQAFHYLAP 366
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 ISDLHYLSP 9
I HYL+P
Sbjct: 358 IQAFHYLAP 366
>sp|E4RF2_ADE02|EARLY 4 ORF2 protein|Human adenovirus C serotype 2
Query: 2 SDLHYLSP 9
S LH++SP
Sbjct: 42 STLHFISP 49
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 DLHYLSPS 10
+LH++SPS
Sbjct: 303 ELHHISPS 310
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 SDLHYLS 8
SDL+YL+
Sbjct: 489 SDLYYLT 495
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 SDLHYLS 8
SDL+YL+
Sbjct: 489 SDLYYLT 495
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 SDLHYLS 8
SDL+YL+
Sbjct: 485 SDLYYLT 491
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 SDLHYLSPS 10
+D+H L P+
Sbjct: 2637 TDIHRLEPA 2645
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 SDLHYLSPS 10
+D+H L P+
Sbjct: 2637 TDIHRLEPA 2645
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 ISDLHY 6
+SDLHY
Sbjct: 421 LSDLHY 426
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ISDLHYLS 8
+ D HY+S
Sbjct: 2096 VGDFHYVS 2103
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 HYLSP 9
HYLSP
Sbjct: 261 HYLSP 265
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 HYLSP 9
HYLSP
Sbjct: 261 HYLSP 265
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 HYLSP 9
HYLSP
Sbjct: 261 HYLSP 265
>sp|ORF2_VZVO|MEMBRANE protein 2|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SDLHYLSPS 10
+ LH L+PS
Sbjct: 117 TGLHLLAPS 125
>sp|ORF2_VZVD|MEMBRANE protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SDLHYLSPS 10
+ LH L+PS
Sbjct: 117 TGLHLLAPS 125
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 HYLSP 9
HYLSP
Sbjct: 261 HYLSP 265
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 ISDLHYLSPS 10
+ D H LSP+
Sbjct: 360 VFDRHLLSPA 369
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ISDLHYLS 8
+SD++YL+
Sbjct: 557 LSDIYYLT 564
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 ISDLHYLS 8
+SD++YL+
Sbjct: 234 LSDIYYLT 241
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 SDLHYLSP 9
SD+ YL P
Sbjct: 667 SDVTYLQP 674
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 1 ISDLHY 6
+SDLH+
Sbjct: 223 VSDLHF 228
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 ISDLHY 6
+SDLH+
Sbjct: 223 VSDLHF 228
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 1 ISDLHY 6
+SDLH+
Sbjct: 223 VSDLHF 228
>sp|GI_CHV1|ENVELOPE glycoprotein I|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 3 DLHYLSP 9
+LH+L P
Sbjct: 55 ELHFLGP 61
69|Sequence|341|350|YLSPSGCTFW
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YLSPSGCTFW 10
YLSP+ FW
Sbjct: 119 YLSPTFSDFW 128
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 YLSPSGCTFW 10
YLSP+ FW
Sbjct: 119 YLSPTFSDFW 128
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 4 PSGCTFW 10
P+GC W
Sbjct: 265 PTGCALW 271
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 4 PSGCTFW 10
P+GC W
Sbjct: 265 PTGCALW 271
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 4 PSGCTFW 10
P+GC W
Sbjct: 211 PTGCAIW 217
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YLSPSGCTFW 10
+L+PS FW
Sbjct: 134 FLAPSMAQFW 143
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 YLSPSGC 7
YLS SGC
Sbjct: 104 YLSKSGC 110
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YLSPSGC 7
YLS SGC
Sbjct: 104 YLSKSGC 110
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YLSPSGCTFW 10
+L+PS FW
Sbjct: 134 FLAPSMAQFW 143
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 YLSPSGCTF 9
Y+S +GC F
Sbjct: 762 YISETGCLF 770
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 2 LSPSGCTFW 10
+S GCTF+
Sbjct: 263 VSARGCTFY 271
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 SGCTFW 10
+GCT+W
Sbjct: 3178 NGCTWW 3183
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 5 SGCTFW 10
SGCT W
Sbjct: 12 SGCTGW 17
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 5 SGCTFW 10
SGCT W
Sbjct: 12 SGCTGW 17
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 SGCTFW 10
+GCT+W
Sbjct: 3178 NGCTWW 3183
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 5 SGCTFW 10
SGCT W
Sbjct: 12 SGCTGW 17
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 YLSPSGCTF 9
YLSPS T+
Sbjct: 236 YLSPSASTW 244
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 YLSPSGCT 8
+LS GCT
Sbjct: 761 FLSKDGCT 768
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 3 SPSGCTFW 10
SPS C F+
Sbjct: 308 SPSSCVFY 315
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 SPSGCTFW 10
S S C FW
Sbjct: 908 SMSRCCFW 915
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 SPSGCTFW 10
S S C FW
Sbjct: 908 SMSRCCFW 915
>sp|NP_ADE04|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus E serotype 4
Query: 1 YLSPSGCTFW 10
++SPS T W
Sbjct: 4 FISPSNNTGW 13
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 162 SPNGCT 167
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 162 SPNGCT 167
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 174 SPNGCT 179
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 174 SPNGCT 179
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 174 SPNGCT 179
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 174 SPNGCT 179
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 SPSGCT 8
SP+GCT
Sbjct: 174 SPNGCT 179
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 2 LSPSGCTF 9
L PS C+F
Sbjct: 20 LCPSSCSF 27
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 SGCTFW 10
S C FW
Sbjct: 851 SRCVFW 856
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 LSPSGC 7
+SP GC
Sbjct: 119 ISPDGC 124
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LSPSGC 7
+SP GC
Sbjct: 119 ISPDGC 124
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 LSPSGC 7
+SP GC
Sbjct: 119 ISPDGC 124
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LSPSGC 7
+SP GC
Sbjct: 119 ISPDGC 124
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LSPSGC 7
+SP GC
Sbjct: 119 ISPDGC 124
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 LSPSGCTFW 10
++PSG T W
Sbjct: 1361 MNPSGKTRW 1369
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 4 PSGCTF 9
P GCT+
Sbjct: 391 PRGCTY 396
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 3 SPSGC 7
SP+GC
Sbjct: 332 SPAGC 336
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 SPSGC 7
SP+GC
Sbjct: 332 SPAGC 336
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 3 SPSGC 7
SP+GC
Sbjct: 332 SPAGC 336
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 SPSGC 7
SP+GC
Sbjct: 332 SPAGC 336
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 5 SGCTFW 10
+GC W
Sbjct: 251 TGCALW 256
>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 YLSPSGCT 8
Y PS CT
Sbjct: 15 YNEPSSCT 22
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 SPSGC 7
SP+GC
Sbjct: 332 SPAGC 336
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 5 SGCTFW 10
+GC W
Sbjct: 245 TGCALW 250
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1045 APSGFKYW 1052
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 5 SGCTFW 10
+GCT W
Sbjct: 12 AGCTGW 17
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1051 TPSGFKYW 1058
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1051 TPSGFKYW 1058
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1045 APSGFKYW 1052
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1051 TPSGFKYW 1058
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1045 APSGFKYW 1052
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 SPSGC 7
SP+GC
Sbjct: 332 SPAGC 336
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1044 APSGFKYW 1051
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 SGCTFW 10
+GCTF+
Sbjct: 2186 TGCTFF 2191
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 6 GCTFW 10
GC +W
Sbjct: 468 GCVYW 472
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 6 GCTFW 10
GC +W
Sbjct: 468 GCVYW 472
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1044 APSGFKYW 1051
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 SPSGCTFW 10
+PSG +W
Sbjct: 1044 APSGFKYW 1051
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 LSPSGCTFW 10
+SP T+W
Sbjct: 91 ISPLAVTWW 99
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 LSPSGCTFW 10
+SP T+W
Sbjct: 91 ISPLAVTWW 99
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 2 LSPSGCTFW 10
+SP T+W
Sbjct: 91 ISPLAVTWW 99
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 2 LSPSGCTFW 10
+SP T+W
Sbjct: 91 ISPLAVTWW 99
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 LSPSGCTFW 10
+SP T+W
Sbjct: 91 ISPLAVTWW 99
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 2 LSPSGCTFW 10
+SP T+W
Sbjct: 91 ISPLAVTWW 99
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YLSPSGCT 8
Y SP CT
Sbjct: 1285 YGSPGSCT 1292
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SPSGCTFW 10
SPS C+F+
Sbjct: 5 SPSTCSFF 12
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 SPSGCTFW 10
SPS C+F+
Sbjct: 5 SPSTCSFF 12
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 PSGCTFW 10
PSG T W
Sbjct: 3300 PSGRTTW 3306
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 PSGCTFW 10
PSG T W
Sbjct: 3300 PSGRTTW 3306
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 PSGCTFW 10
PSG T W
Sbjct: 3300 PSGRTTW 3306
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 6 GCTFW 10
GC FW
Sbjct: 1145 GCLFW 1149
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 6 GCTFW 10
GC FW
Sbjct: 1145 GCLFW 1149
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 6 GCTFW 10
GCT W
Sbjct: 13 GCTGW 17
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 6 GCTFW 10
GCT W
Sbjct: 13 GCTGW 17
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 YLSPSGCTFW 10
++SP+ CT +
Sbjct: 429 HMSPALCTIF 438
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 6 GCTFW 10
GCT W
Sbjct: 13 GCTGW 17
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 YLSPSGCTF 9
Y SPS T+
Sbjct: 236 YFSPSASTW 244
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 YLSPSGCTF 9
Y SPS T+
Sbjct: 236 YFSPSASTW 244
>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1
Query: 3 SPSGCTFW 10
+PS C F+
Sbjct: 144 APSSCNFF 151
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 YLSPSGCTF 9
Y SPS T+
Sbjct: 236 YFSPSASTW 244
70|Sequence|346|355|GCTFWGKKPW
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 3 TFWGKKPW 10
TF+ KKPW
Sbjct: 177 TFFVKKPW 184
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CTFWGKKPW 10
CT+WG W
Sbjct: 3453 CTYWGILYW 3461
Query: 1 GCTFW 5
GC FW
Sbjct: 1145 GCLFW 1149
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CTFWGKKPW 10
CT+WG W
Sbjct: 3453 CTYWGILYW 3461
Query: 1 GCTFW 5
GC FW
Sbjct: 1145 GCLFW 1149
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CTFWGKKP 9
C WG KP
Sbjct: 336 CYHWGSKP 343
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 CTFWGKKP 9
C WG KP
Sbjct: 336 CYHWGSKP 343
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTFWGKKP 9
C WG KP
Sbjct: 336 CYHWGSKP 343
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CTFWGKKP 9
C WG KP
Sbjct: 336 CYHWGSKP 343
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 2 CTFWGKKP 9
C WG KP
Sbjct: 336 CYHWGSKP 343
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 GCTFWG 6
GCTF+G
Sbjct: 267 GCTFYG 272
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 GCTFWGK 7
GCT+W K
Sbjct: 3179 GCTWWLK 3185
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 GCTFWGK 7
GCT+W K
Sbjct: 3179 GCTWWLK 3185
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CTFWGKKPW 10
C W KK W
Sbjct: 570 CFTWDKKLW 578
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 437 WGKKP 441
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 5 WGKKPW 10
+GK+PW
Sbjct: 87 FGKEPW 92
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 5 WGKKPW 10
+GK+PW
Sbjct: 87 YGKEPW 92
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 437 WGKKP 441
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 5 WGKKPW 10
+GK+PW
Sbjct: 87 YGKEPW 92
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 439 WGKKP 443
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 437 WGKKP 441
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 438 WGKKP 442
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 438 WGKKP 442
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 438 WGKKP 442
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 438 WGKKP 442
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 WGKKP 9
WGKKP
Sbjct: 436 WGKKP 440
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 WGKKPW 10
WG+K W
Sbjct: 1341 WGRKSW 1346
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 1 GCTFWGKKPW 10
GC F + PW
Sbjct: 141 GCMFNQRFPW 150
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 WGKKPW 10
WG+K W
Sbjct: 1342 WGRKSW 1347
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 WGKKPW 10
WG+K W
Sbjct: 1342 WGRKSW 1347
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 GCTF-WGKKPW 10
GCT WG PW
Sbjct: 471 GCTMRWGLPPW 481
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 GCTF-WGKKPW 10
GCT WG PW
Sbjct: 471 GCTMRWGLPPW 481
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GCTFWGKKP 9
G WGK P
Sbjct: 961 GIVIWGKTP 969
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 5 WGKKPW 10
+GK+PW
Sbjct: 13 YGKEPW 18
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GCTFW 5
GC +W
Sbjct: 468 GCVYW 472
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GCTFW 5
GC +W
Sbjct: 468 GCVYW 472
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 5 WGKKPW 10
+GK+PW
Sbjct: 87 YGKEPW 92
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 CTFWGKKPW 10
C W +K W
Sbjct: 570 CFTWDQKLW 578
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CTFWGKKPW 10
C W +K W
Sbjct: 570 CFTWDQKLW 578
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 CTFWGKKPW 10
C W +K W
Sbjct: 570 CFTWDQKLW 578
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 WGKKP 9
WG KP
Sbjct: 134 WGNKP 138
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 CTFWGKKPW 10
C W +K W
Sbjct: 570 CFTWDQKLW 578
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 WGKKP 9
WG KP
Sbjct: 134 WGNKP 138
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 WGKKP 9
WG KP
Sbjct: 134 WGNKP 138
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 CTFWGKK 8
CT W KK
Sbjct: 208 CTSWRKK 214
>sp|UL06_HCMVA|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CTFWGKK 8
CT WG +
Sbjct: 119 CTLWGSR 125
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 CTFWGKKPW 10
C W +K W
Sbjct: 570 CFTWDQKLW 578
>sp|VPX_HV2BE|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 GCTFWGK 7
GCT WG+
Sbjct: 86 GCTCWGE 92
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 3 TFWGKKPW 10
T W +KP+
Sbjct: 87 TLWYQKPF 94
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 GCTFWG 6
GC+F+G
Sbjct: 257 GCSFFG 262
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 CTFWGK 7
C FW +
Sbjct: 853 CVFWSE 858
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 CTFWGK 7
C FW +
Sbjct: 853 CVFWSE 858
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CTFWGK 7
C FW +
Sbjct: 853 CVFWSE 858
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CTFWGK 7
C FW +
Sbjct: 853 CVFWSE 858
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 CTFWGK 7
C FW +
Sbjct: 502 CAFWSE 507
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 2 CTFWGKK 8
C F GKK
Sbjct: 337 CEFVGKK 343
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 GCTF-WGKKPW 10
GC WG PW
Sbjct: 471 GCAMRWGLPPW 481
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GCTF-WGKKPW 10
GC WG PW
Sbjct: 471 GCAMRWGLPPW 481
71|Sequence|351|360|GKKPWSRKKK
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 4 PWSRKKK 10
PW RKKK
Sbjct: 36 PWLRKKK 42
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 4 PWSRKKK 10
PW RKKK
Sbjct: 36 PWLRKKK 42
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 4 PWSRKK 9
PW RKK
Sbjct: 160 PWLRKK 165
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 KKPWSRKKK 10
+K WS +KK
Sbjct: 402 RKGWSARKK 410
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 1 GKKPWS 6
GK+PW+
Sbjct: 88 GKEPWT 93
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 GKKPWS 6
GK+PWS
Sbjct: 88 GKEPWS 93
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 1 GKKPWS 6
GK+PW+
Sbjct: 14 GKEPWT 19
72|Sequence|356|365|SRKKKILWQL
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 RKKKILWQ 9
RK+ ILW+
Sbjct: 433 RKRSILWR 440
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 RKKKILWQ 9
RK+ ILW+
Sbjct: 433 RKRSILWR 440
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 RKKKILWQ 9
RK+ ILW+
Sbjct: 433 RKRNILWR 440
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 SRKKKILW 8
+RKKK+ W
Sbjct: 553 NRKKKVYW 560
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SRKKKILW 8
+RKKK+ W
Sbjct: 553 NRKKKVYW 560
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 1 SRKKKILWQL 10
+RK+ +LW L
Sbjct: 62 TRKETMLWDL 71
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 1 SRKKKILWQL 10
+RK+ +LW L
Sbjct: 62 TRKETMLWDL 71
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 2 RKKKILW 8
RKKK+ W
Sbjct: 545 RKKKVYW 551
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SRKKKILWQL 10
SR+ ++ W++
Sbjct: 153 SRRSQVKWRM 162
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 KKKILW 8
KK++LW
Sbjct: 1459 KKRLLW 1464
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 KKKILW 8
KK++LW
Sbjct: 1460 KKRLLW 1465
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 2 RKKKILWQ 9
R+K+I+W+
Sbjct: 131 RRKEIMWK 138
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 2 RKKKILWQ 9
R+K+I+W+
Sbjct: 131 RRKEIMWK 138
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 2 RKKKILWQ 9
R+K+I+W+
Sbjct: 131 RRKEIMWK 138
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 RKKKILWQ 9
R+K+I+W+
Sbjct: 131 RRKEIMWK 138
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 KKKILW 8
KK++LW
Sbjct: 1369 KKRLLW 1374
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 RKKKIL 7
RKKK+L
Sbjct: 1506 RKKKVL 1511
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 RKKKIL 7
RKKK+L
Sbjct: 1505 RKKKVL 1510
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 RKKKIL 7
RKKK+L
Sbjct: 1505 RKKKVL 1510
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 RKKKIL 7
RKKK+L
Sbjct: 1505 RKKKVL 1510
>sp|PG108_VAR67|ENVELOPE protein H3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KKKILWQL 10
K K+LW L
Sbjct: 309 KSKLLWFL 316
>sp|PG108_VACCC|ENVELOPE protein H3|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KKKILWQL 10
K K+LW L
Sbjct: 308 KSKLLWFL 315
>sp|PG108_MONPV|ENVELOPE protein OPG108|Monkeypox virus (MPXV)
Query: 3 KKKILWQL 10
K K+LW L
Sbjct: 308 KSKLLWFL 315
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 RKKKIL 7
RKKK+L
Sbjct: 1503 RKKKVL 1508
73|Sequence|361|370|ILWQLGTLVG
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 3 WQLGTL 8
WQLGT+
Sbjct: 5 WQLGTI 10
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 3 WQLGTLV 9
W+LGT+V
Sbjct: 135 WKLGTIV 141
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ILWQLGTLV 9
ILW+LG +
Sbjct: 129 ILWRLGATI 137
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 ILWQLG 6
ILW+LG
Sbjct: 129 ILWRLG 134
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ILWQLGTLV 9
ILW+LG +
Sbjct: 129 ILWRLGATI 137
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 1 ILWQLGTLV 9
ILW+LG +
Sbjct: 129 ILWRLGATI 137
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ILWQLGT 7
++WQ+G+
Sbjct: 837 VMWQVGS 843
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 3 WQLGTLVG 10
W LG ++G
Sbjct: 74 WSLGGIIG 81
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 WQLGTLVG 10
W LG ++G
Sbjct: 74 WSLGGIIG 81
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 3 WQLGTLVG 10
W LG ++G
Sbjct: 74 WSLGGIIG 81
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 LWQLGTLVG 10
WQ+ +L+G
Sbjct: 488 FWQIQSLLG 496
>sp|LMP1_EBVB9|LATENT membrane protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ILWQLGTLV 9
+LW+LG +
Sbjct: 129 MLWRLGATI 137
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 LWQLGTLVG 10
WQ+ +L+G
Sbjct: 488 FWQIQSLLG 496
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 LWQLGTLV 9
LW+ GT++
Sbjct: 13 LWRWGTML 20
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 LWQLGT 7
+W++GT
Sbjct: 537 MWEMGT 542
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 2 LWQLGT 7
+W++GT
Sbjct: 537 MWEMGT 542
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 2 LWQLGTLV 9
LW+ T+V
Sbjct: 175 LWKFATIV 182
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LWQLGTLV 9
LW+ T+V
Sbjct: 175 LWKFATIV 182
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 2 LWQLGTLV 9
LW+ T+V
Sbjct: 175 LWKFATIV 182
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 ILWQLGTLV 9
ILW TLV
Sbjct: 1680 ILWDYFTLV 1688
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 2 LWQLGT 7
+W++GT
Sbjct: 537 MWEMGT 542
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 2 LWQLGT 7
+W++GT
Sbjct: 537 MWEMGT 542
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 LGTLVG 10
LGTL+G
Sbjct: 75 LGTLIG 80
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 WQLGTLVG 10
W +G ++G
Sbjct: 74 WSIGGIIG 81
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 WQLGTLVG 10
W L +VG
Sbjct: 1211 WSLSNIVG 1218
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 WQLGTLVG 10
W L +VG
Sbjct: 1211 WSLSNIVG 1218
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 WQLGTLVG 10
W L +VG
Sbjct: 1211 WSLSNIVG 1218
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 1 ILWQLG 6
++WQ+G
Sbjct: 621 VIWQIG 626
74|Sequence|366|375|GTLVGAPVGI
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 LVGAPVG 9
LVGAPVG
Sbjct: 139 LVGAPVG 145
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 TLVGAPVGI 10
TL APVG+
Sbjct: 309 TLTAAPVGL 317
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 TLVGAPVGI 10
TL APVG+
Sbjct: 309 TLTAAPVGL 317
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 TLVGAPVGI 10
TL APVG+
Sbjct: 309 TLTAAPVGL 317
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 LVGAPVG 9
LVGAPVG
Sbjct: 139 LVGAPVG 145
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 LVGAPVG 9
LVGAPVG
Sbjct: 139 LVGAPVG 145
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 GTLVGAP 7
GTL+G P
Sbjct: 76 GTLIGPP 82
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 LVGAPVG 9
L+GAPVG
Sbjct: 139 LIGAPVG 145
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 VGAPVGI 10
+GAP+GI
Sbjct: 136 LGAPLGI 142
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 LVGAPVG 9
+VGAPVG
Sbjct: 139 VVGAPVG 145
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 GTLVGAPVGI 10
GT +G P G+
Sbjct: 1020 GTFLGVPDGL 1029
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GTLVGAPVGI 10
G +VG PV +
Sbjct: 776 GAIVGTPVCV 785
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GTLVGAPVGI 10
G +VG PV +
Sbjct: 776 GAIVGTPVCV 785
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 11 LVGAPLG 17
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 23 LVGAPLG 29
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 23 LVGAPLG 29
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 23 LVGAPLG 29
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 LVGAPVG 9
LVGAP+G
Sbjct: 139 LVGAPLG 145
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 1 GTLVGAP 7
GT++G P
Sbjct: 76 GTIIGPP 82
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 1 GTLVGAP 7
GT++G P
Sbjct: 76 GTIIGPP 82
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 LVGAPVG 9
+VGAPVG
Sbjct: 139 VVGAPVG 145
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 LVGAPVG 9
+VGAPVG
Sbjct: 139 VVGAPVG 145
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 LVGAPVG 9
+VGAPVG
Sbjct: 139 VVGAPVG 145
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 LVGAPVG 9
+VGAPVG
Sbjct: 139 VVGAPVG 145
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 5 GAPVGI 10
G PVGI
Sbjct: 856 GVPVGI 861
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 5 GAPVGI 10
G PVGI
Sbjct: 856 GVPVGI 861
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 TLVGAPV 8
TLVG P+
Sbjct: 31 TLVGPPI 37
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1465 VGAAVGI 1471
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1465 VGAAVGI 1471
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1465 VGAAVGI 1471
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1299 VGAAVGI 1305
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1465 VGAAVGI 1471
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1465 VGAAVGI 1471
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1463 VGAAVGI 1469
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VGAPVGI 10
VGA VGI
Sbjct: 1465 VGAAVGI 1471
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 TLVGAPV 8
TL+G P+
Sbjct: 31 TLIGPPI 37
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 TLVGAPV 8
TL+G P+
Sbjct: 31 TLIGPPI 37
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 TLVGAPV 8
TL+G P+
Sbjct: 31 TLIGPPI 37
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 1 GTLVGAP 7
GT++G P
Sbjct: 76 GTVIGPP 82
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 1 GTLVGAP 7
GT++G P
Sbjct: 76 GTVIGPP 82
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 GTLVGAPV 8
T++G PV
Sbjct: 166 ATIIGTPV 173
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 3 LVGAPVGI 10
L APVG+
Sbjct: 771 LYNAPVGV 778
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GTLVGAP 7
GTL G P
Sbjct: 104 GTLAGRP 110
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GTLVGAP 7
GTL G P
Sbjct: 104 GTLAGRP 110
>sp|PG091_VARV|PROTEIN OPG091|Variola virus
Query: 2 TLVGAPVG 9
TL+G P G
Sbjct: 94 TLLGIPYG 101
>sp|PG091_VAR67|PROTEIN OPG091|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 TLVGAPVG 9
TL+G P G
Sbjct: 94 TLLGIPYG 101
>sp|PG091_VACCC|PROTEIN OPG091|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TLVGAPVG 9
TL+G P G
Sbjct: 94 TLLGIPYG 101
>sp|PG091_MONPV|PROTEIN OPG091|Monkeypox virus (MPXV)
Query: 2 TLVGAPVG 9
TL+G P G
Sbjct: 94 TLLGIPYG 101
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 LVGAPVG 9
+VGAP+G
Sbjct: 139 VVGAPLG 145
75|Sequence|371|380|APVGIALIAG
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 APVGIA 6
AP+GIA
Sbjct: 1204 APIGIA 1209
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 APVGIA 6
AP+GIA
Sbjct: 1204 APIGIA 1209
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 VGIALIA 9
VGIAL+A
Sbjct: 2444 VGIALVA 2450
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 APVGIALIAG 10
P+G+A I+G
Sbjct: 470 GPLGVANISG 479
76|Sequence|376|385|ALIAGIAIPA
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 LIAGIAIP 9
L AG++IP
Sbjct: 766 LFAGMSIP 773
77|Sequence|381|390|IAIPAMIIGI
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 AIPAMIIG 9
A+PA+++G
Sbjct: 2364 AVPAIVVG 2371
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 IPAMIIGI 10
IP M++G+
Sbjct: 734 IPKMLLGV 741
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 1 IAIPAMIIGI 10
+A+P +IG+
Sbjct: 237 VALPVKLIGM 246
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 IAIPAMIIGI 10
+A+P +IG+
Sbjct: 237 VALPVKLIGM 246
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 1 IAIPAMIIGI 10
+A+P +IG+
Sbjct: 237 VALPVKLIGM 246
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 2 AIPAMIIGI 10
AIP +IG+
Sbjct: 243 AIPVKLIGM 251
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1038 LGIPESIIGL 1047
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1037 LGIPESIIGL 1046
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 IAIPAMIIGI 10
+ IP IIG+
Sbjct: 1038 LGIPESIIGL 1047
78|Sequence|386|395|MIIGIPVYVG
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 MIIGIPVYV 9
++ G+PVYV
Sbjct: 328 VVQGLPVYV 336
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 IGIPVYVG 10
+GIP +VG
Sbjct: 1198 LGIPSHVG 1205
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLFGYPVYV 19
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 GIPVYV 9
G+PVY+
Sbjct: 333 GLPVYI 338
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 GIPVYV 9
G+PVY+
Sbjct: 333 GLPVYI 338
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLFGYPVYV 19
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLFGYPVYV 19
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 1 MIIGIPVYVG 10
MI +P+Y G
Sbjct: 413 MIPHVPLYCG 422
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 MIIGIPVYVG 10
MI +P+Y G
Sbjct: 413 MIPHVPLYCG 422
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLYGYPVYV 19
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLYGYPVYV 19
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLYGYPVYV 19
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 MIIGIPVYV 9
++ G PVYV
Sbjct: 11 LLYGYPVYV 19
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 IIGIPVYVG 10
I+GI +VG
Sbjct: 382 ILGISCFVG 390
>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IIGIPVYVG 10
I+GI +VG
Sbjct: 382 ILGISCFVG 390
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 MIIGIPVY 8
+I+G P+Y
Sbjct: 43 LIVGHPLY 50
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 IGIPVYVG 10
I +PVY G
Sbjct: 402 IDVPVYTG 409
79|Sequence|391|400|PVYVGRKIHN
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 PVYVGRKIHN 10
P++ G+K+ N
Sbjct: 2006 PIFTGKKVIN 2015
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 PVYVGRKIHN 10
P Y+ IHN
Sbjct: 96 PKYITHSIHN 105
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 PVYVGR 6
PV+VGR
Sbjct: 388 PVFVGR 393
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PVYVGR 6
PV+VGR
Sbjct: 711 PVFVGR 716
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 1 PVYVGRKIHN 10
P Y+ IHN
Sbjct: 91 PKYITHSIHN 100
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 PVYVGR 6
P++VGR
Sbjct: 2269 PIFVGR 2274
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 PVYVGR 6
P++VGR
Sbjct: 2289 PIFVGR 2294
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 PVYVGR 6
P++VGR
Sbjct: 2319 PIFVGR 2324
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PVYVGR 6
P++VGR
Sbjct: 2269 PIFVGR 2274
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PVYVGR 6
P++VGR
Sbjct: 2289 PIFVGR 2294
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PVYVGR 6
P++VGR
Sbjct: 2319 PIFVGR 2324
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 PVYVGRKI 8
P+YV R+I
Sbjct: 316 PLYVERRI 323
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PVYVGRKI 8
P+YV R+I
Sbjct: 319 PLYVERRI 326
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 VYVGRKIHN 10
+YVG +HN
Sbjct: 2677 LYVGGPMHN 2685
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 PVYVGRKIHN 10
P+Y R IH+
Sbjct: 371 PLYRSRIIHS 380
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 3 YVGRKIH 9
Y+G+ IH
Sbjct: 1272 YIGQDIH 1278
>sp|VE5_HPV5B|PROBABLE protein E5|Human papillomavirus type 5b
Query: 1 PVYVGRK 7
PV+VGR+
Sbjct: 68 PVHVGRQ 74
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 VGRKIHN 10
VGR I+N
Sbjct: 1312 VGRNIYN 1318
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YVGRKIHN 10
YVG KI++
Sbjct: 975 YVGSKIYS 982
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 PVYVGRKIHN 10
P+++ ++HN
Sbjct: 356 PIHIPGEVHN 365
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 PVYVGRKIH 9
PVY ++H
Sbjct: 1128 PVYYSARLH 1136
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 VGRKIH 9
+G+KIH
Sbjct: 564 IGKKIH 569
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VGRKIH 9
+G+KIH
Sbjct: 564 IGKKIH 569
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 4 VGRKIH 9
+G+KIH
Sbjct: 564 IGKKIH 569
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 4 VGRKIH 9
+G+KIH
Sbjct: 564 IGKKIH 569
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 4 VGRKIH 9
+G+KIH
Sbjct: 564 IGKKIH 569
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 4 VGRKIH 9
+G+KIH
Sbjct: 564 IGKKIH 569
80|Sequence|396|405|RKIHNRYEGK
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 3 IHNRYEGK 10
IH RYEGK
Sbjct: 322 IHTRYEGK 329
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 IHNRYEGK 10
IH RYEGK
Sbjct: 322 IHTRYEGK 329
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 RKIHNRYE 8
RKIH+R E
Sbjct: 2797 RKIHHRIE 2804
Query: 1 RKIHNR 6
RKIH R
Sbjct: 1492 RKIHKR 1497
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 RKIHNRY 7
R+IH+RY
Sbjct: 84 RRIHSRY 90
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KIHNRYEGK 10
K HN +EGK
Sbjct: 1608 KPHNSHEGK 1616
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KIHNRYEGK 10
K HN +EGK
Sbjct: 1608 KPHNSHEGK 1616
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 IHNRYEGK 10
I+ RYEGK
Sbjct: 322 IYTRYEGK 329
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 3 IHNRYEGK 10
I+ RYEGK
Sbjct: 322 IYTRYEGK 329
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 RKIHNRYE 8
+ +H+RYE
Sbjct: 2431 KAVHSRYE 2438
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 RKIHNRY 7
++IH+RY
Sbjct: 84 KRIHSRY 90
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 RKIHNRY 7
++IH+RY
Sbjct: 84 KRIHSRY 90
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 HNRYEGK 10
NR+EG+
Sbjct: 525 QNRFEGR 531
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 IHNRYE 8
+HNRY+
Sbjct: 88 VHNRYK 93
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 3 IHNRYE 8
+HNRY+
Sbjct: 88 VHNRYK 93
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 RKIHNRYEG 9
+KIH Y G
Sbjct: 1059 QKIHRGYHG 1067
81|Sequence|401|410|RYEGKDVSKH
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 2 YEGKDVSKH 10
YEG+DV+ H
Sbjct: 255 YEGEDVTLH 263
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 2 YEGKDVS 8
YEG+DVS
Sbjct: 254 YEGEDVS 260
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 2 YEGKDVS 8
YEG+DVS
Sbjct: 254 YEGEDVS 260
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 2 YEGKDVS 8
YEG+DVS
Sbjct: 255 YEGEDVS 261
>sp|VL2_HPV11|MINOR capsid protein L2|Human papillomavirus 11
Query: 2 YEGKDVS 8
YEG+DVS
Sbjct: 253 YEGEDVS 259
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 2 YEGKDVS 8
YEG+D+S
Sbjct: 256 YEGEDIS 262
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 4 GKDVSKH 10
GKD S+H
Sbjct: 1373 GKDKSRH 1379
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 YEGKDV 7
YEG DV
Sbjct: 502 YEGSDV 507
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 YEGKDV 7
YEG DV
Sbjct: 502 YEGSDV 507
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 YEGKDV 7
YEG DV
Sbjct: 502 YEGSDV 507
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 YEGKDV 7
YEG DV
Sbjct: 502 YEGSDV 507
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 YEGKDV 7
YEG DV
Sbjct: 502 YEGSDV 507
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 YEGKDV 7
YEG DV
Sbjct: 502 YEGSDV 507
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 YEGKDV 7
Y GKDV
Sbjct: 2620 YSGKDV 2625
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 YEGKDV 7
Y GKDV
Sbjct: 2619 YSGKDV 2624
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 2 YEGKDVSKH 10
Y G D KH
Sbjct: 463 YSGLDTGKH 471
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 RYEGKDVS 8
RYE +D+S
Sbjct: 364 RYEMRDMS 371
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 YEGKDVSKH 10
YEG + S H
Sbjct: 94 YEGVNFSPH 102
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 RYEGKDVS 8
RYE +D+S
Sbjct: 365 RYEMRDMS 372
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YEGKD 6
YEGKD
Sbjct: 112 YEGKD 116
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 YEGKD 6
YEGKD
Sbjct: 120 YEGKD 124
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1291 DGKDVS 1296
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1294 DGKDVS 1299
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1282 DGKDVS 1287
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1282 DGKDVS 1287
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1283 DGKDVS 1288
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1283 DGKDVS 1288
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1285 DGKDVS 1290
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1280 DGKDVS 1285
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1299 DGKDVS 1304
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1291 DGKDVS 1296
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 YEGKDV 7
Y GKDV
Sbjct: 1307 YRGKDV 1312
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1293 DGKDVS 1298
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1281 DGKDVS 1286
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1281 DGKDVS 1286
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1292 DGKDVS 1297
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 EGKDVS 8
+GKDVS
Sbjct: 1301 DGKDVS 1306
82|Sequence|406|415|DVSKHKRNLA
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 5 HKRNL 9
HKRNL
Sbjct: 123 HKRNL 127
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 2 VSKHKRNL 9
+ KHK NL
Sbjct: 928 IQKHKNNL 935
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 VSKHKRNL 9
+S+H RN
Sbjct: 284 ISRHPRNF 291
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SKHKRNLA 10
S+H +N+A
Sbjct: 261 SRHAKNIA 268
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SKHKRNLA 10
S+H +N+A
Sbjct: 261 SRHAKNIA 268
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SKHKRNLA 10
S+H +N+A
Sbjct: 261 SRHAKNIA 268
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 SKHKRNLA 10
S+H +N+A
Sbjct: 261 SRHAKNIA 268
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 DVSKHKRNL 9
DVSK +NL
Sbjct: 694 DVSKVNKNL 702
83|Sequence|411|420|KRNLAIAGGV
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 KRNLAIAGG 9
KRN+A +GG
Sbjct: 2272 KRNIATSGG 2280
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 KRNLAIAGGV 10
+RN I GGV
Sbjct: 50 RRNFCINGGV 59
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 KRNLAIAGG 9
K NL I+GG
Sbjct: 1736 KHNLPISGG 1744
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 KRNLAIAGG 9
K NL I+GG
Sbjct: 1736 KHNLPISGG 1744
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 KRNLAIAGG 9
K NL I+GG
Sbjct: 1736 KHNLPISGG 1744
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 KRNLAIAGG 9
+RN+A +GG
Sbjct: 2272 RRNIATSGG 2280
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 2 RNLAIAGGV 10
RN I GGV
Sbjct: 51 RNFCINGGV 59
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 NLAIAGGV 10
NLAI GG+
Sbjct: 349 NLAIEGGM 356
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 NLAIAGGV 10
NLAI GG+
Sbjct: 349 NLAIEGGM 356
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 NLAIAGGV 10
NLAI GG+
Sbjct: 349 NLAIEGGM 356
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 NLAIAGGV 10
NLAI GG+
Sbjct: 349 NLAIEGGM 356
84|Sequence|416|425|IAGGVTLSVI
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GVTLSVI 10
G+TLSVI
Sbjct: 277 GITLSVI 283
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 IAGGVTL 7
+AGGVTL
Sbjct: 118 LAGGVTL 124
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 IAGGVTLSV 9
+AGG+ LS+
Sbjct: 244 MAGGIGLSI 252
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 IAGGVTLSV 9
+AGG+ LS+
Sbjct: 244 MAGGIGLSI 252
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IAGGVTLSV 9
+AGG+ LS+
Sbjct: 244 MAGGIGLSI 252
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IAGGVTLSV 9
+AGG+ LS+
Sbjct: 244 MAGGIGLSI 252
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 IAGGVTLSV 9
+AGG+ LS+
Sbjct: 244 MAGGIGLSI 252
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 IAGGVT 6
IAGGVT
Sbjct: 326 IAGGVT 331
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 IAGGVT 6
IAGGVT
Sbjct: 333 IAGGVT 338
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 IAGGVT 6
IAGGVT
Sbjct: 331 IAGGVT 336
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 IAGGVTL 7
+AGGVTL
Sbjct: 118 MAGGVTL 124
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 IAGGVTL 7
+AGGVTL
Sbjct: 118 MAGGVTL 124
>sp|E316_ADE03|EARLY E3 16 kDa glycoprotein|Human adenovirus B serotype 3
Query: 1 IAGGVTLSVI 10
+AG VTL V+
Sbjct: 105 VAGFVTLGVV 114
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 IAGGVTLSV 9
+AGG+T S+
Sbjct: 330 VAGGITGSM 338
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 IAGGVTLSV 9
+AGG+T S+
Sbjct: 330 VAGGITGSM 338
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 IAGGVTLSV 9
+AGG+T S+
Sbjct: 330 VAGGITGSM 338
85|Sequence|421|430|TLSVIVSPVV
***** No hits found ******
86|Sequence|426|435|VSPVVAAVTV
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 SPVVAAV 8
SPVVAA+
Sbjct: 112 SPVVAAI 118
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VSPVVAAVTV 10
+SP++ AVTV
Sbjct: 265 LSPLLGAVTV 274
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VSPVVAAVTV 10
+SP++ AVTV
Sbjct: 265 LSPLLGAVTV 274
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VSPVVAAVTV 10
+SP++ AVTV
Sbjct: 264 LSPLLGAVTV 273
87|Sequence|431|440|AAVTVGIGVP
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 1 AAVTVGIGV 9
AAVT+GI +
Sbjct: 152 AAVTIGISI 160
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 AAVTVGIGVP 10
AAV V +G+P
Sbjct: 326 AAVNVTVGLP 335
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 AAVTVGIGVP 10
AAV V +G+P
Sbjct: 326 AAVNVTVGLP 335
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 1 AAVTVGIGV 9
AAVT+GI +
Sbjct: 152 AAVTIGISI 160
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 AAVTVGIGVP 10
A + +G+G+P
Sbjct: 386 ADIGIGVGMP 395
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 TVGIGVP 10
T+G GVP
Sbjct: 1184 TIGSGVP 1190
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 TVGIGVP 10
T+G GVP
Sbjct: 1184 TIGSGVP 1190
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 VTVGIGVP 10
VTV GVP
Sbjct: 36 VTVYFGVP 43
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 3 VTVGIGVP 10
+TVG+G P
Sbjct: 175 MTVGVGTP 182
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 AAVTVGIGV 9
A TVG+GV
Sbjct: 1356 AKGTVGVGV 1364
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 TVGIGVP 10
T+G G+P
Sbjct: 1186 TIGDGIP 1192
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 TVGIGVP 10
T+G G+P
Sbjct: 1186 TIGDGIP 1192
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 TVGIGVP 10
T+G G+P
Sbjct: 1185 TIGDGIP 1191
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 TVGIGVP 10
T+G G+P
Sbjct: 1185 TIGDGIP 1191
88|Sequence|436|445|GIGVPIMLAY
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GIGVPIMLAY 10
G GVPI+ +Y
Sbjct: 4597 GCGVPIVDSY 4606
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 IGVPIM 7
+GVP+M
Sbjct: 98 VGVPVM 103
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GIGVPIMLA 9
G+GVP +A
Sbjct: 208 GLGVPFNIA 216
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GIGVPIMLA 9
G+GVP +A
Sbjct: 208 GLGVPFNIA 216
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 GIGVPIMLA 9
G+GVP +A
Sbjct: 244 GLGVPFNIA 252
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 5 PIMLAY 10
PI+LAY
Sbjct: 202 PIVLAY 207
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 5 PIMLAY 10
PI+LAY
Sbjct: 202 PIVLAY 207
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 PIMLAY 10
PI+LAY
Sbjct: 202 PIVLAY 207
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 5 PIMLAY 10
PI+LAY
Sbjct: 202 PIVLAY 207
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 VPIMLAY 10
+PI++AY
Sbjct: 294 IPIVVAY 300
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VPIMLAY 10
+PI++AY
Sbjct: 294 IPIVVAY 300
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 IGVPIMLAY 10
+G+P +AY
Sbjct: 3636 VGMPSFVAY 3644
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 IGVPIMLAY 10
+G+P +AY
Sbjct: 3636 VGMPSFVAY 3644
89|Sequence|441|450|IMLAYVYGVV
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 IMLAYVYGVV 10
I +AY+YG++
Sbjct: 234 IPIAYIYGII 243
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 IMLAYVYGVV 10
I +AY+YGV+
Sbjct: 234 IPIAYMYGVI 243
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 IMLAYVYGVV 10
I +AY YG++
Sbjct: 234 IPIAYAYGII 243
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IMLAYVYGV 9
+ LAYVY +
Sbjct: 136 VFLAYVYSM 144
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IMLAYVYGV 9
+ LAYVY +
Sbjct: 136 VFLAYVYSM 144
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 4 AYVYG 8
AYVYG
Sbjct: 177 AYVYG 181
90|Sequence|446|455|VYGVVPISLC
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 VYGVVPISL 9
VYG +PIS+
Sbjct: 1072 VYGNIPISM 1080
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 YGVVPIS 8
YG+VPI+
Sbjct: 189 YGIVPIN 195
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YGVVPIS 8
YG+VPI+
Sbjct: 189 YGIVPIN 195
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YGVVPIS 8
YG+VPI+
Sbjct: 189 YGIVPIN 195
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 VYGVVPISLC 10
V G +P++LC
Sbjct: 578 VNGNLPLALC 587
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 VYGVVP 6
VYG VP
Sbjct: 132 VYGTVP 137
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YGVVPISLC 10
Y +PI +C
Sbjct: 547 YDQIPIEIC 555
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YGVVPISLC 10
Y +PI +C
Sbjct: 542 YDQIPIEIC 550
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YGVVPISLC 10
Y +PI +C
Sbjct: 547 YDQIPIEIC 555
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VYGVVPISLC 10
+ G +P+ LC
Sbjct: 594 INGNIPVPLC 603
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YGVVPISLC 10
Y +PI +C
Sbjct: 551 YDQIPIDIC 559
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 YGVVPISL 9
YG +PIS+
Sbjct: 1079 YGNIPISI 1086
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 YGVVPISL 9
YG +PIS+
Sbjct: 1079 YGNIPISI 1086
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 YGVVPISL 9
YG +PIS+
Sbjct: 1070 YGHIPISI 1077
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 VYGVVP 6
V+GV+P
Sbjct: 241 VFGVIP 246
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 YGVVPIS 8
+GV+P++
Sbjct: 392 FGVIPVA 398
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 YGVVPIS 8
+GV+P++
Sbjct: 393 FGVIPVA 399
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 VYGVVPI 7
V G+VPI
Sbjct: 33 VVGIVPI 39
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 YGVVPISLC 10
Y +P+ +C
Sbjct: 549 YDQIPVEIC 557
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GVVPISL 9
GVVP+S+
Sbjct: 3742 GVVPLSV 3748
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 GVVPISL 9
GVVP+S+
Sbjct: 3742 GVVPLSV 3748
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 VYGVVPISL 9
+ G+VPI +
Sbjct: 434 ISGIVPIDM 442
91|Sequence|451|460|PISLCRSGGC
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 PISLCRSGGC 10
P+SLC G C
Sbjct: 34 PVSLCGRGWC 43
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 1 PISLCRSGGC 10
P+S C++ C
Sbjct: 171 PMSYCQADNC 180
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ISLCRSGGC 10
++ CR G C
Sbjct: 3055 MTYCRVGAC 3063
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ISLCRSGGC 10
++ CR G C
Sbjct: 3005 MTYCRVGAC 3013
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ISLCRSGGC 10
++ CR G C
Sbjct: 3025 MTYCRVGAC 3033
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ISLCRSGGC 10
++ CR G C
Sbjct: 3055 MTYCRVGAC 3063
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 ISLCRSGGC 10
++ CR G C
Sbjct: 3005 MTYCRVGAC 3013
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 ISLCRSGGC 10
++ CR G C
Sbjct: 3025 MTYCRVGAC 3033
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 ISLCRSG 8
I+LCR G
Sbjct: 1440 INLCRDG 1446
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 1 PISLCRSG 8
P+ LCR G
Sbjct: 1025 PLCLCRGG 1032
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 PISLCRSG 8
P+ LCR G
Sbjct: 1025 PLCLCRGG 1032
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 4 LCRSGG 9
LCR GG
Sbjct: 184 LCRMGG 189
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 2 ISLCRSGG 9
ISLCR G
Sbjct: 168 ISLCRVRG 175
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 1 PISLCRSGGC 10
P+S C++ C
Sbjct: 191 PVSCCKTHTC 200
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 PISLCRSG 8
P+ LCR G
Sbjct: 1103 PLRLCRGG 1110
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 SLCRSGG 9
S+C SGG
Sbjct: 154 SVCSSGG 160
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 ISLCRSGGC 10
+S CR G C
Sbjct: 2967 MSYCRVGLC 2975
Query: 3 SLCRSGGC 10
S+C +G C
Sbjct: 135 SVCNTGRC 142
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 ISLCRSGGC 10
+S CR G C
Sbjct: 2967 MSYCRVGLC 2975
Query: 3 SLCRSGGC 10
S+C +G C
Sbjct: 135 SVCNTGRC 142
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 SLCRSGGC 10
+LC++G C
Sbjct: 1343 ALCQAGVC 1350
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 LCRSGGC 10
+C S GC
Sbjct: 777 MCLSSGC 783
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 4 LCRSGG 9
LCR GG
Sbjct: 58 LCRLGG 63
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1098 PVSFHGSDGC 1107
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 5 CRSGG 9
C+SGG
Sbjct: 352 CKSGG 356
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 5 CRSGG 9
C+SGG
Sbjct: 352 CKSGG 356
>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24
Query: 2 ISLCRSGGC 10
I LC GGC
Sbjct: 45 IILCCGGGC 53
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 PISLCRSGGC 10
P+S S GC
Sbjct: 1083 PVSYWTSEGC 1092
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 5 CRSGGC 10
CR G C
Sbjct: 2968 CRFGSC 2973
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 CRSGGC 10
CR G C
Sbjct: 2968 CRFGSC 2973
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 PISLCRS 7
PI +C+S
Sbjct: 248 PIDICQS 254
92|Sequence|456|465|RSGGCGVSAG
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 RSGGCGVSAG 10
R G CG+ G
Sbjct: 194 REGSCGICMG 203
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 RSGGCGVSAG 10
R G CG+ G
Sbjct: 194 REGSCGICMG 203
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 SGGCGVSAG 10
+GG GVS G
Sbjct: 1632 AGGGGVSVG 1640
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 SGGCGVS 8
+ GCGVS
Sbjct: 5022 ASGCGVS 5028
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GCGVS 8
GCGVS
Sbjct: 5364 GCGVS 5368
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 RSGGCGVS 8
RSGG GV+
Sbjct: 173 RSGGIGVT 180
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 RSGGCGV 7
R+G CG+
Sbjct: 403 RAGRCGI 409
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 2 SGGCGVS 8
SGG G+S
Sbjct: 370 SGGVGIS 376
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 RSGGCG 6
R+G CG
Sbjct: 24 RAGACG 29
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CGVSAG 10
CGVSA
Sbjct: 4404 CGVSAA 4409
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CGVSAG 10
CGVSA
Sbjct: 4381 CGVSAA 4386
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RSGGC 5
R+GGC
Sbjct: 336 RNGGC 340
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RSGGC 5
R+GGC
Sbjct: 336 RNGGC 340
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 RSGGCG 6
RSGG G
Sbjct: 2018 RSGGAG 2023
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 RSGGCG 6
RSG CG
Sbjct: 1113 RSGFCG 1118
93|Sequence|461|470|GVSAGNGKGV
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 SAGNGKGV 10
S+GNGK V
Sbjct: 82 SSGNGKKV 89
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 VSAGNGKGV 10
VSAGNG+ +
Sbjct: 1137 VSAGNGQTI 1145
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 VSAGNGKGV 10
VSAG G GV
Sbjct: 1136 VSAGRGDGV 1144
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 SAGNGKGV 10
S G GKG+
Sbjct: 1255 SPGTGKGI 1262
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAGNGK 8
VSAG+GK
Sbjct: 1123 VSAGSGK 1129
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAGNGK 8
VSAG+GK
Sbjct: 1123 VSAGSGK 1129
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VSAGNGK 8
VSAG+GK
Sbjct: 1123 VSAGSGK 1129
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 2 VSAGNGK 8
VS+GNG+
Sbjct: 695 VSSGNGR 701
>sp|VP2_LORDV|MINOR capsid protein VP2|Lordsdale virus (strain GII/Human/United
Query: 1 GVSAGNGKGV 10
G SAG+G GV
Sbjct: 179 GSSAGSGTGV 188
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 GVSAGNG 7
GV+A NG
Sbjct: 16 GVTASNG 22
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 5 GNGKGV 10
G+GKGV
Sbjct: 312 GSGKGV 317
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 5 GNGKGV 10
G+GKGV
Sbjct: 312 GSGKGV 317
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 5 GNGKGV 10
G+GKGV
Sbjct: 312 GSGKGV 317
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 5 GNGKGV 10
G+GKGV
Sbjct: 312 GSGKGV 317
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 GNGKGV 10
G+GKGV
Sbjct: 312 GSGKGV 317
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 GNGKGV 10
G+GKGV
Sbjct: 312 GSGKGV 317
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GVSAGNGKG 9
GV+ G+G G
Sbjct: 2419 GVAPGSGSG 2427
94|Sequence|466|475|NGKGVRIEFD
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 NGKGVRIEF 9
NG+G R+EF
Sbjct: 234 NGQGGRMEF 242
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 1 NGKGVRIEF 9
NG+G R+EF
Sbjct: 234 NGQGGRMEF 242
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 3 KGVRIEFD 10
+G+RIEF+
Sbjct: 494 EGLRIEFE 501
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 NGKGVRIEF 9
NG+ RIEF
Sbjct: 236 NGQSGRIEF 244
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 2 GKGVRIEFD 10
GK V ++FD
Sbjct: 114 GKTVEVKFD 122
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 2 GKGVRIEFD 10
GK V ++FD
Sbjct: 114 GKTVEVKFD 122
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 GKGVRIEFD 10
GK V + FD
Sbjct: 114 GKTVEVRFD 122
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 GKGVRIEFD 10
GK V + FD
Sbjct: 114 GKTVEVRFD 122
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 NGKGVRIE 8
N K VRIE
Sbjct: 804 NNKTVRIE 811
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 3 KGVRIEF 9
KG+++EF
Sbjct: 952 KGIQLEF 958
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 3 KGVRIEF 9
KG+++EF
Sbjct: 952 KGIQLEF 958
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 225 NGQSGRMEF 233
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 225 NGQSGRMEF 233
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQSGRMEF 244
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 234 NGQSGRMEF 242
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 225 NGQSGRMEF 233
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 232 NGQSGRMEF 240
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 225 NGQSGRMEF 233
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 NGKGVRIEF 9
NG+ R+EF
Sbjct: 236 NGQNGRMEF 244
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 1 NGKGVRIEF 9
NG+ RI+F
Sbjct: 233 NGQSGRIDF 241
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 1 NGKGVRIEF 9
NG+ RI+F
Sbjct: 233 NGQSGRIDF 241
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 NGKGVRIEF 9
NG+ RI+F
Sbjct: 233 NGQSGRIDF 241
95|Sequence|471|480|RIEFDDENDI
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 RIEFDDEND 9
RIE +DE D
Sbjct: 50 RIESEDEED 58
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 354 FDDGNDV 360
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 IEFDDENDI 10
+EF +E+D+
Sbjct: 647 LEFSEEDDV 655
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 4 FDDENDI 10
FDD ND+
Sbjct: 331 FDDGNDV 337
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 EFDDENDI 10
EF D+N+I
Sbjct: 445 EFSDKNEI 452
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 IEFDDENDI 10
I+F D++DI
Sbjct: 2612 IKFKDKSDI 2620
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 IEFDDEN 8
+EF DEN
Sbjct: 2688 LEFTDEN 2694
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 IEFDDEN 8
+EF DEN
Sbjct: 2688 LEFTDEN 2694
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 RIEFDDEND 9
R+E +DE D
Sbjct: 50 RLESEDEED 58
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 IEFDDEN 8
+EF DEN
Sbjct: 2708 LEFTDEN 2714
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 IEFDDEN 8
+EF DEN
Sbjct: 2708 LEFTDEN 2714
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IEFDDENDI 10
+EFDD+ ++
Sbjct: 297 LEFDDDANL 305
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 IEFDDENDI 10
+EFDD+ ++
Sbjct: 297 LEFDDDANL 305
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 IEFDDEN 8
+EF DEN
Sbjct: 2738 LEFTDEN 2744
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 IEFDDEN 8
+EF DEN
Sbjct: 2738 LEFTDEN 2744
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 RIEFDDEND 9
R+E END
Sbjct: 355 RLELTTEND 363
>sp|NSP1B_ROTGI|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate RVB/Rat/United
Query: 2 IEFDDENDI 10
IEF D N +
Sbjct: 298 IEFQDNNHL 306
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 EFDDEND 9
E+DDE++
Sbjct: 209 EYDDEDE 215
96|Sequence|476|485|DENDINVGGT
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 ENDINVGGT 10
+N INVGGT
Sbjct: 540 DNAINVGGT 548
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 ENDINVGGT 10
+N INVGGT
Sbjct: 540 DNAINVGGT 548
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 ENDINVGGT 10
E D VGGT
Sbjct: 229 EQDFRVGGT 237
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 2 ENDINV 7
ENDINV
Sbjct: 48 ENDINV 53
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 ENDINVGGT 10
E+ +NVGG+
Sbjct: 967 EHAVNVGGS 975
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 ENDINVGGT 10
E+ +NVGG+
Sbjct: 967 EHAVNVGGS 975
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 DENDINVGG 9
+EN IN GG
Sbjct: 5892 NENAINKGG 5900
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 DENDINVGG 9
DE+ IN+ G
Sbjct: 230 DESSINISG 238
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 DENDIN 6
DEND N
Sbjct: 794 DENDYN 799
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 DENDINVGG 9
DE+ IN+ G
Sbjct: 230 DESSINISG 238
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 DENDINVG 8
DE+ I+VG
Sbjct: 1858 DESQIDVG 1865
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 DENDIN 6
D+NDIN
Sbjct: 14 DDNDIN 19
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 ENDINV 7
+NDIN+
Sbjct: 54 QNDINI 59
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 1 DENDINVGG 9
DE+ IN+ G
Sbjct: 231 DESAINISG 239
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2777 EKDVNLG 2783
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2774 EEDVNLG 2780
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2774 EEDVNLG 2780
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2770 EEDVNLG 2776
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2784 EEDVNLG 2790
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2783 EEDVNLG 2789
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2783 EEDVNLG 2789
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2782 EEDVNLG 2788
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2782 EEDVNLG 2788
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2782 EEDVNLG 2788
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2780 EEDVNLG 2786
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2784 EEDVNLG 2790
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 ENDINVG 8
E D+N+G
Sbjct: 2782 EEDVNLG 2788
97|Sequence|481|490|NVGGTNTAVD
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 3 GGTNTAVD 10
GG +AVD
Sbjct: 35 GGATSAVD 42
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 3 GGTNTAVD 10
GG N +VD
Sbjct: 69 GGLNISVD 76
98|Sequence|486|495|NTAVDTTSVA
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 NTAVDTTSVA 10
+T+ DT S+A
Sbjct: 1687 DTSTDTQSIA 1696
99|Sequence|491|500|TTSVAEARHN
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 TTSVAEARHN 10
T+SVA R N
Sbjct: 503 TSSVARLRQN 512
100|Sequence|496|505|EARHNPSIGE
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 ARHNPSI 8
+RHNPS+
Sbjct: 859 SRHNPSL 865
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 3 RHNPSIGE 10
R NP IGE
Sbjct: 257 RENPGIGE 264
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 3 RHNPSIG 9
R NPS+G
Sbjct: 3 RPNPSVG 9
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 5 NPSIGE 10
NPS+GE
Sbjct: 257 NPSLGE 262
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EARHNPS 7
+ARH PS
Sbjct: 362 DARHRPS 368
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 1 EARHNPSIGE 10
E + NP GE
Sbjct: 58 ERKANPKFGE 67
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 EARHNPSIGE 10
E + NP GE
Sbjct: 58 ERKANPKFGE 67
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ARHNP 6
ARHNP
Sbjct: 267 ARHNP 271
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ARHNP 6
ARHNP
Sbjct: 267 ARHNP 271
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 1 EARHNPSIGE 10
E + NP GE
Sbjct: 58 ERKANPKFGE 67
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 RHNPSIGE 10
RHNP E
Sbjct: 1321 RHNPHTPE 1328
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 HNPSIGE 10
H+P++G+
Sbjct: 1738 HSPAVGD 1744
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 HNPSIGE 10
H+P++G+
Sbjct: 1738 HSPAVGD 1744
101|Sequence|501|510|PSIGEGSVGG
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 PSIGEGSVGG 10
P++G+ VGG
Sbjct: 1740 PAVGDQQVGG 1749
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 1 PSIGEG 6
PS+GEG
Sbjct: 258 PSLGEG 263
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 IGEGSVGG 10
+G G+VGG
Sbjct: 1705 MGAGTVGG 1712
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 IGEGSVGG 10
+G G+VGG
Sbjct: 1705 MGAGTVGG 1712
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PSIGEGSVGG 10
P +GE GG
Sbjct: 963 PKLGEAFTGG 972
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GEGSVG 9
GEG+VG
Sbjct: 446 GEGAVG 451
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GEGSVG 9
GEG+VG
Sbjct: 446 GEGAVG 451
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 PSIGEG 6
P IGEG
Sbjct: 260 PGIGEG 265
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 PSIGEGSVGG 10
P G G+VGG
Sbjct: 429 PPGGRGAVGG 438
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PSIGEGSV 8
P++ EGS+
Sbjct: 93 PAVSEGSM 100
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSIGEGSV 8
P++ EGS+
Sbjct: 93 PAVSEGSM 100
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PSIGEGSV 8
P++ EGS+
Sbjct: 93 PAVSEGSM 100
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 PSIGEGSV 8
PS+G G V
Sbjct: 411 PSLGHGEV 418
102|Sequence|506|515|GSVGGLTGSL
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GSVGGLTGSL 10
G GG+TGS+
Sbjct: 329 GMAGGITGSM 338
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GSVGGLTGSL 10
G GG+TGS+
Sbjct: 329 GMAGGITGSM 338
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GSVGGLTGSL 10
G GG+TGS+
Sbjct: 329 GVAGGITGSM 338
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GSVGGLTGSL 10
G GG+TGS+
Sbjct: 329 GVAGGITGSM 338
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 GSVGGLTGSL 10
G GG+TGS+
Sbjct: 329 GVAGGITGSM 338
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSVGGLTGSL 10
GSVGGL SL
Sbjct: 702 GSVGGLLTSL 711
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSVGGLTGSL 10
GSVGGL SL
Sbjct: 702 GSVGGLLTSL 711
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSVGGLTGSL 10
GSVGGL SL
Sbjct: 702 GSVGGLFTSL 711
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSVGGLTGSL 10
GSVGGL SL
Sbjct: 702 GSVGGLFTSL 711
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GSVGGLTGSL 10
GSVGGL SL
Sbjct: 702 GSVGGLFTSL 711
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 701 GSVGGVLNSL 710
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 701 GSVGGVLNSL 710
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 701 GSVGGVLNSL 710
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 701 GSVGGVLNSL 710
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 701 GSVGGVLNSL 710
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 GSVGGLT 7
GS+GGL+
Sbjct: 269 GSIGGLS 275
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 721 GSVGGVFNSL 730
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 GSVGGLT 7
GS+GGL+
Sbjct: 269 GSIGGLS 275
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GSVGGLTGSL 10
GSVGG+ SL
Sbjct: 718 GSVGGVFNSL 727
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GSVGGLTGS 9
GSV GLT S
Sbjct: 6575 GSVKGLTPS 6583
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GSVGGLTGSL 10
GS GG GS+
Sbjct: 704 GSAGGFFGSI 713
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GSVGGLTGSL 10
GSVGG+ S+
Sbjct: 714 GSVGGIFNSI 723
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GSVGGLTGSL 10
GSVGG SL
Sbjct: 722 GSVGGALNSL 731
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GSVGGLTGSL 10
GSVGG SL
Sbjct: 722 GSVGGALNSL 731
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 GSVGGLTGSL 10
GSVGG+ S+
Sbjct: 715 GSVGGILNSV 724
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 GSVGGLTGSL 10
GSVGG+ S+
Sbjct: 714 GSVGGVFNSI 723
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 GSVGGLTGSL 10
GSVGG+ S+
Sbjct: 721 GSVGGVFNSI 730
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GSVGGLTGSL 10
GSVGG+ S+
Sbjct: 721 GSVGGIFNSV 730
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 GSVGGLTGSL 10
GSVGG+ S+
Sbjct: 716 GSVGGVLTSI 725
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 GSVGGLTG 8
G GG+TG
Sbjct: 325 GIAGGVTG 332
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GSVGGLTG 8
G GG+TG
Sbjct: 332 GIAGGVTG 339
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GSVGGLTG 8
G GG+TG
Sbjct: 330 GIAGGVTG 337
>sp|PHOSP_PI3H4|PHOSPHOPROTEIN parainfluenza 3 virus (strain
Query: 4 GGLTGSL 10
GG++GS+
Sbjct: 125 GGISGSI 131
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GSVGGLTGSL 10
G+VGG S+
Sbjct: 731 GAVGGAVASV 740
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSVGGLTGSL 10
G+VGG S+
Sbjct: 731 GAVGGAVASV 740
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSVGGLTGSL 10
G+VGG S+
Sbjct: 730 GAVGGAVASV 739
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GSVGGLTGSL 10
GS+GG+ S+
Sbjct: 717 GSIGGVFNSI 726
103|Sequence|511|520|LTGSLSASGS
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GSLSASGS 10
G LSA+GS
Sbjct: 533 GVLSAAGS 540
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 GSLSASGS 10
SLSA+GS
Sbjct: 15 ASLSATGS 22
>sp|VIL6_HHV8P|VIRAL interleukin-6 homolog|Human herpesvirus 8 type P
Query: 1 LTGSLSASGS 10
L GSL SG+
Sbjct: 11 LVGSLLVSGT 20
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GSLSASGS 10
G LSA+GS
Sbjct: 523 GVLSAAGS 530
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 SLSASGS 10
SLSASG+
Sbjct: 16 SLSASGN 22
104|Sequence|516|525|SASGSHMDRI
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SASGSH 6
SASGSH
Sbjct: 1788 SASGSH 1793
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 ASGSHMDRI 10
ASG H D++
Sbjct: 27 ASGGHWDKL 35
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SASGSHMDRI 10
+A+ S+MDR+
Sbjct: 315 TAAHSYMDRL 324
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SASGSHMDRI 10
+A+ S+MDR+
Sbjct: 315 TAAHSYMDRL 324
105|Sequence|521|530|HMDRIGAIRD
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HMDRIGAIR 9
++DR GA+R
Sbjct: 101 YLDRAGALR 109
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 DRIGAIRD 10
+RIGA+R+
Sbjct: 2792 ERIGALRE 2799
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 HMDRIGA 7
H++RIG+
Sbjct: 233 HLERIGS 239
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 HMDRIG 6
H+DR+G
Sbjct: 247 HIDRVG 252
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 HMDRIG 6
H+DR+G
Sbjct: 247 HIDRVG 252
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 HMDRIGAIR 9
++DR+ AIR
Sbjct: 27 YLDRLYAIR 35
106|Sequence|526|535|GAIRDNLSET
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 GAIRDNLSET 10
GA+ DN+S T
Sbjct: 55 GALLDNISTT 64
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 AIRDNLSET 10
AIRDN +T
Sbjct: 1609 AIRDNFCKT 1617
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 194 ALRDNL 199
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 194 ALRDNL 199
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 667 ALRDNL 672
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 664 ALRDNL 669
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 664 ALRDNL 669
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 AIRDNL 7
A+RDNL
Sbjct: 671 ALRDNL 676
107|Sequence|531|540|NLSETASTMA
>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2
Query: 1 NLSETAST 8
+LSE+AST
Sbjct: 120 DLSESAST 127
108|Sequence|536|545|ASTMALAGAS
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ASTMALAGAS 10
A T+A AGAS
Sbjct: 386 AYTLATAGAS 395
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 1 ASTMALAGAS 10
AST A GAS
Sbjct: 223 ASTQAQVGAS 232
109|Sequence|541|550|LAGASITGSL
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 2 AGASITGS 9
AGA ITGS
Sbjct: 575 AGALITGS 582
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 AGASITGS 9
AGA+ITG+
Sbjct: 1436 AGAAITGT 1443
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 LAGASITGSL 10
LAGASI +L
Sbjct: 2509 LAGASIAWTL 2518
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 LAGASITGS 9
L+G ITGS
Sbjct: 1166 LSGVIITGS 1174
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 SITGSL 10
SITGSL
Sbjct: 994 SITGSL 999
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 LAGASITGSL 10
+ ASITG L
Sbjct: 67 VCSASITGEL 76
110|Sequence|546|555|ITGSLSGSAM
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 TGSLSGSA 9
TGS+SG+A
Sbjct: 217 TGSMSGTA 224
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 TGSLSGSA 9
TGS+SG+A
Sbjct: 217 TGSMSGTA 224
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 1 ITGSLSGS 8
I GSLSG+
Sbjct: 252 IAGSLSGN 259
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 1 ITGSLSGSAM 10
I G+L+GS +
Sbjct: 342 IIGALAGSTL 351
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 1 ITGSLSGSAM 10
I G+L+GS +
Sbjct: 342 IIGALAGSTL 351
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 ITGSLSG 7
+TG LSG
Sbjct: 295 VTGELSG 301
111|Sequence|551|560|SGSAMVNCFN
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 GSAMVNCFN 10
GSA+ +CFN
Sbjct: 264 GSAVFDCFN 272
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 GSAMVNCFN 10
G+A+ CFN
Sbjct: 264 GTAVFECFN 272
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 SGSAMVNCF 9
SGSA++N F
Sbjct: 442 SGSAVLNSF 450
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 SGSAMVNCF 9
+GS ++CF
Sbjct: 397 AGSKYIHCF 405
>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SGSAMVNC 8
+GSA NC
Sbjct: 142 TGSAEANC 149
>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SGSAMVNC 8
+GSA NC
Sbjct: 142 TGSAEANC 149
>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)
Query: 1 SGSAMVNC 8
+GSA NC
Sbjct: 142 TGSAEANC 149
112|Sequence|556|565|VNCFNRLEVQ
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 VNCFNR 6
+NC+NR
Sbjct: 268 INCYNR 273
>sp|TEG7_HHV6Z|TEGUMENT protein UL51 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 NCFNRLEV 9
NCF RL +
Sbjct: 11 NCFRRLSL 18
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 428 VYCYNRL 434
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VNCFNRL 7
V C+NRL
Sbjct: 449 VYCYNRL 455
>sp|TEG7_HHV6U|TEGUMENT protein UL51 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NCFNRLEV 9
NCF RL +
Sbjct: 3 NCFRRLSL 10
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VNCFNRLEVQ 10
+N F +EVQ
Sbjct: 3096 LNTFTNMEVQ 3105
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VNCFNRLEVQ 10
+N F +EVQ
Sbjct: 3096 LNTFTNMEVQ 3105
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VNCFNRLEVQ 10
+N F +EVQ
Sbjct: 3096 LNTFTNMEVQ 3105
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VNCFNRLEVQ 10
+N F +EVQ
Sbjct: 3096 LNTFTNMEVQ 3105
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VNCFNRLEVQ 10
+N F +EVQ
Sbjct: 3096 LNTFTNMEVQ 3105
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VNCFNRLEVQ 10
+N F +EVQ
Sbjct: 3101 LNTFTNMEVQ 3110
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 1 VNCFNRLE 8
V+CFN +
Sbjct: 277 VHCFNETQ 284
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 1 VNCFNR 6
+NC NR
Sbjct: 34 INCINR 39
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VNCFNR 6
+NC NR
Sbjct: 34 INCINR 39
113|Sequence|561|570|RLEVQADVQK
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEVQADVQK 10
+E+Q D+Q+
Sbjct: 330 IELQKDIQR 338
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain AD169)
Query: 2 LEVQADVQK 10
+E+Q D+Q+
Sbjct: 328 IELQKDIQR 336
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 RLEVQADVQK 10
+LE+ AD+ K
Sbjct: 1031 KLEINADMSK 1040
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 RLEVQADVQK 10
R E+Q D+++
Sbjct: 505 RKEIQEDIER 514
114|Sequence|566|575|ADVQKERYSL
>sp|YVBC_VACCC|UNCHARACTERIZED 10.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ADVQKERYSL 10
AD+ +ER+S+
Sbjct: 50 ADIVEERFSV 59
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 5 KERYSL 10
KERY+L
Sbjct: 246 KERYAL 251
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 ADVQKERY 8
ADV K RY
Sbjct: 378 ADVTKFRY 385
>sp|GD_HHV1P|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Patton)
Query: 2 DVQKERYSL 10
DV+K+ Y+L
Sbjct: 112 DVRKQPYNL 120
>sp|GD_HHV1K|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain KOS)
Query: 2 DVQKERYSL 10
DV+K+ Y+L
Sbjct: 112 DVRKQPYNL 120
>sp|GD_HHV1H|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain HZT)
Query: 2 DVQKERYSL 10
DV+K+ Y+L
Sbjct: 111 DVRKQPYNL 119
>sp|GD_HHV1F|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain F)
Query: 2 DVQKERYSL 10
DV+K+ Y+L
Sbjct: 112 DVRKQPYNL 120
>sp|GD_HHV1A|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain Angelotti)
Query: 2 DVQKERYSL 10
DV+K+ Y+L
Sbjct: 112 DVRKQPYNL 120
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 2 DVQKERYSL 10
DV+K+ Y+L
Sbjct: 112 DVRKQPYNL 120
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I83A1|NUCLEOPROTEIN A virus (strain A/Chile/1/1983
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I83A2|NUCLEOPROTEIN A virus (strain A/Ohio/4/1983
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DVQKERYSL 10
D QK+ Y+L
Sbjct: 168 DKQKKEYAL 176
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I96A2|NUCLEOPROTEIN A virus (strain A/USA:Memphis/10/1996
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I00A1|NUCLEOPROTEIN A virus (strain A/New
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I96A3|NUCLEOPROTEIN A virus (strain A/China:Nanchang/11/1996
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I07A0|NUCLEOPROTEIN A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 DVQKERYSL 10
D +KE YSL
Sbjct: 290 DFEKEGYSL 298
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 5 KERYSL 10
KE+YSL
Sbjct: 310 KEKYSL 315
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 KERYSL 10
KE+YSL
Sbjct: 633 KEKYSL 638
>sp|PG132_MONPV|VIRION morphogenesis protein OPG132|Monkeypox virus (MPXV)
Query: 2 DVQKERY 8
DV+KE++
Sbjct: 94 DVEKEKF 100
>sp|PG132_VACCC|VIRION morphogenesis protein OPG132|Vaccinia virus (strain Copenhagen)
Query: 2 DVQKERY 8
DV+KE++
Sbjct: 94 DVEKEKF 100
115|Sequence|571|580|ERYSLSGESG
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ERYSLSGES 9
ERY L GES
Sbjct: 143 ERYGLCGES 151
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 ERYSLSGE 8
+RY+ SGE
Sbjct: 2047 KRYACSGE 2054
>sp|VE6_HPV35|PROTEIN E6|Human papillomavirus 35
Query: 2 RYSLSGES 9
RYS+ GE+
Sbjct: 80 RYSVYGET 87
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 ERYSLSGESG 10
E Y +SG SG
Sbjct: 2738 EMYWVSGSSG 2747
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ERYSLSGESG 10
E Y +SG SG
Sbjct: 2704 EMYWVSGASG 2713
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ERYSLSGESG 10
E Y +SG SG
Sbjct: 2704 EMYWVSGASG 2713
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 ERYSLSGESG 10
E Y +SG SG
Sbjct: 2704 EMYWVSGASG 2713
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 ERYSLSGESG 10
E Y +SG SG
Sbjct: 2747 EMYWVSGASG 2756
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 ERYSLSGE 8
ERY SG+
Sbjct: 182 ERYGTSGK 189
116|Sequence|576|585|SGESGTVSLG
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SGESGTVSL 9
+GE+GT++L
Sbjct: 395 TGENGTITL 403
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 1 SGESGTVSLG 10
SGE+ T SLG
Sbjct: 164 SGETTTDSLG 173
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 SGESGTVSL 9
S E GTVS+
Sbjct: 203 SHEGGTVSV 211
117|Sequence|581|590|TVSLGTVSDN
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 1 TVSLGT 6
TVSLGT
Sbjct: 131 TVSLGT 136
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 1 TVSLGT 6
TVSLGT
Sbjct: 131 TVSLGT 136
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 VSLGTVS 8
VS+GTVS
Sbjct: 1281 VSIGTVS 1287
118|Sequence|586|595|TVSDNASTKA
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 TVSDNASTK 9
TV+D++ST+
Sbjct: 205 TVTDSSSTR 213
119|Sequence|591|600|ASTKAMAGSI
>sp|REV_HV2SB|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 ASTKAMAGS 9
+STK AGS
Sbjct: 144 SSTKDQAGS 152
120|Sequence|596|605|MAGSILNSYI
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 MAGSILNSY 9
+A SILN Y
Sbjct: 808 VANSILNKY 816
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GSILNSY 9
GS++NSY
Sbjct: 282 GSLVNSY 288
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 GSILNSY 9
GS++NSY
Sbjct: 282 GSLVNSY 288
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 MAGSILNSY 9
+A SILN Y
Sbjct: 808 VANSILNKY 816
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 SILNSYI 10
SILNS++
Sbjct: 465 SILNSFV 471
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 SILNSYI 10
SILNS++
Sbjct: 465 SILNSFV 471
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 SILNSYI 10
SILNS++
Sbjct: 465 SILNSFV 471
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 1 MAGSILNSY 9
M GSI+ SY
Sbjct: 517 MNGSIITSY 525
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 3 GSILNSYI 10
GSILN Y+
Sbjct: 193 GSILNLYL 200
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 MAGSILNSYI 10
+ GSILN Y+
Sbjct: 195 LIGSILNLYL 204
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 MAGSILNSYI 10
+ GSILN Y+
Sbjct: 195 LIGSILNLYL 204
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 MAGSILNSYI 10
+ GSILN Y+
Sbjct: 195 LIGSILNLYL 204
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 AGSILN 7
AGS+LN
Sbjct: 1359 AGSVLN 1364
>sp|CAP9_ADE05|HEXON-INTERLACING protein IX|Human adenovirus C serotype 5
Query: 3 GSILNSYI 10
GSI++SY+
Sbjct: 8 GSIVSSYL 15
>sp|CAP9_ADE02|HEXON-INTERLACING protein IX|Human adenovirus C serotype 2
Query: 3 GSILNSYI 10
GSI++SY+
Sbjct: 8 GSIVSSYL 15
121|Sequence|601|610|LNSYIPLDKE
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 1 LNSYIPL 7
LNSYIPL
Sbjct: 119 LNSYIPL 125
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 4 YIPLDKE 10
Y+P+DKE
Sbjct: 265 YVPIDKE 271
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PLDK
Sbjct: 119 LTKYLPLDK 127
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 4 YIPLDKE 10
Y+P+DKE
Sbjct: 288 YVPIDKE 294
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 4 YIPLDKE 10
Y+P+DKE
Sbjct: 288 YVPIDKE 294
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 NSYIPLDKE 10
NSYIP D++
Sbjct: 2142 NSYIPRDRK 2150
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
+ Y+PLDK
Sbjct: 119 VTKYLPLDK 127
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
Y+PLDK
Sbjct: 119 FTKYLPLDK 127
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 124 YLPLDK 129
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 122 YLPLDK 127
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
Y+PLDK
Sbjct: 119 FTKYLPLDK 127
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 LNSYIPLDK 9
Y+PLDK
Sbjct: 119 FTKYLPLDK 127
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 4 YIPLDK 9
Y+PLDK
Sbjct: 122 YLPLDK 127
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDKE
Sbjct: 704 VPLDKE 709
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 LNSYIPLDK 9
L Y+PL+K
Sbjct: 119 LTKYLPLEK 127
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDKE
Sbjct: 706 VPLDKE 711
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDKE
Sbjct: 705 VPLDKE 710
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDKE
Sbjct: 700 VPLDKE 705
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LNSYIPLDK 9
+ Y PLDK
Sbjct: 119 VTKYFPLDK 127
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 LNSYIPLDK 9
+ Y PLDK
Sbjct: 119 VTKYFPLDK 127
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 YIPLDK 9
Y PLDK
Sbjct: 122 YFPLDK 127
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPISLE 848
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPISLE 848
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPISLE 848
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPISLE 848
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPISLE 848
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPISLE 848
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LNSYIPLDK 9
L Y PL+K
Sbjct: 119 LTKYFPLEK 127
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YIPLDK 9
Y+P+DK
Sbjct: 5625 YLPIDK 5630
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 NSYIPLDKE 10
NSY+ +DK+
Sbjct: 575 NSYVLIDKK 583
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPIALE 848
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LNSYIPLDKE 10
LNSY P+ E
Sbjct: 839 LNSYAPVSLE 848
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 YIPLDK 9
Y+P+DK
Sbjct: 5648 YLPIDK 5653
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 3 SYIPLDKE 10
SY+PL+ E
Sbjct: 41 SYLPLNNE 48
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 NSYIPL 7
NSY+PL
Sbjct: 137 NSYMPL 142
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 LNSYIPLDK 9
+ Y P+DK
Sbjct: 119 VTKYFPMDK 127
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 LNSYIPLD 8
+NS +P+D
Sbjct: 3282 INSTVPVD 3289
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 LNSYIPLDKE 10
L +PLDK+
Sbjct: 1338 LKKLVPLDKQ 1347
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LNSYIPLD 8
+NS +P+D
Sbjct: 3291 INSAVPVD 3298
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPI 845
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 4 YIPLDKE 10
+IP+D+E
Sbjct: 68 FIPVDRE 74
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 4 YIPLDKE 10
+IP+D+E
Sbjct: 68 FIPVDRE 74
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 700 VPLDKD 705
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 705 VPLDKD 710
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 700 VPLDKD 705
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPV 845
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 2 NSYIPLDKE 10
+ Y+P D+E
Sbjct: 16 DGYMPSDRE 24
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 711 VPLDKD 716
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 709 VPLDKD 714
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 707 VPLDKD 712
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPV 845
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPV 845
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPV 845
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPV 845
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 LNSYIPL 7
LNSY P+
Sbjct: 839 LNSYAPV 845
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 706 VPLDKD 711
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 704 VPLDKD 709
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 700 VPLDKD 705
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 699 VPLDKD 704
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 IPLDKE 10
+PLDK+
Sbjct: 705 VPLDKD 710
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 YIPLDK 9
Y+PL+K
Sbjct: 122 YLPLEK 127
122|Sequence|606|615|PLDKEGNSME
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 1 PLDKEGN 7
PLDK GN
Sbjct: 586 PLDKNGN 592
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 PLDKEGNSM 9
P D+ GN++
Sbjct: 588 PFDRNGNAL 596
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 2 LDKEGNSME 10
+DK+GN E
Sbjct: 458 IDKKGNKQE 466
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 PLDKEGNS 8
PLDK G S
Sbjct: 346 PLDKHGQS 353
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 PLDKEGNS 8
PL+ EGN+
Sbjct: 181 PLNGEGNN 188
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 PLDKEGNSM 9
P D+ GN++
Sbjct: 594 PFDRNGNAV 602
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 1 PLDKEGN 7
P DK GN
Sbjct: 579 PFDKNGN 585
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 1 PLDKEGN 7
P DK GN
Sbjct: 573 PFDKNGN 579
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 PLDKEGN 7
P DK GN
Sbjct: 600 PFDKNGN 606
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 PLDKEGN 7
P DK GN
Sbjct: 586 PFDKNGN 592
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 PLDKEGNSM 9
P D+ GN++
Sbjct: 594 PFDRNGNAV 602
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 PLDKEGNSM 9
P D+ GN++
Sbjct: 594 PFDRNGNAV 602
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 PLDKEGNSM 9
P D+ GN++
Sbjct: 591 PFDRNGNAV 599
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 PLDKEGN 7
PLD GN
Sbjct: 587 PLDTNGN 593
>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66
Query: 1 PLDKEGN 7
PLD GN
Sbjct: 574 PLDNNGN 580
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 PLDKEGNSM 9
P D GN++
Sbjct: 592 PFDSNGNAV 600
>sp|PG036_VARV|PROTEIN OPG036|Variola virus
Query: 1 PLDKEGNSME 10
P+ EG+SM+
Sbjct: 21 PILPEGSSMD 30
>sp|PG036_VAR67|PROTEIN OPG036|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PLDKEGNSME 10
P+ EG+SM+
Sbjct: 21 PILPEGSSMD 30
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 PLDKEGNSM 9
P D GN++
Sbjct: 579 PFDNNGNAV 587
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 PLDKEGNSM 9
P D GN++
Sbjct: 593 PFDSNGNAV 601
123|Sequence|611|620|GNSMEVQVDI
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 1 GNSMEVQVD 9
GN EV++D
Sbjct: 202 GNGAEVEID 210
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 1 GNSMEVQVD 9
GN EV++D
Sbjct: 201 GNGAEVEID 209
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GNSMEVQVDI 10
GN+ VQ+D+
Sbjct: 132 GNTTYVQIDL 141
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka
Query: 1 GNSMEVQVDI 10
G S+E+Q+D+
Sbjct: 38 GISLELQLDV 47
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 GNSMEVQVDI 10
G S+E+Q+D+
Sbjct: 38 GISLELQLDV 47
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 GNSMEVQV 8
GNSME+ +
Sbjct: 140 GNSMELMI 147
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 GNSMEVQV 8
GNSME+ +
Sbjct: 140 GNSMELMI 147
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 GNSMEVQV 8
GNSME+ +
Sbjct: 140 GNSMELMI 147
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 GNSMEVQV 8
GNSME+ +
Sbjct: 140 GNSMELMI 147
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 GNSMEVQV 8
GNSME+ +
Sbjct: 140 GNSMELMI 147
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 GNSMEV 6
GNSM+V
Sbjct: 423 GNSMDV 428
>sp|Y15K_HBVD3|PUTATIVE uncharacterized 15.3 kDa protein|Hepatitis B virus genotype D
Query: 1 GNSMEVQV 8
GN ++VQV
Sbjct: 39 GNGVKVQV 46
124|Sequence|616|625|VQVDIESKPS
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VQVDIESKPS 10
V VD+E+KPS
Sbjct: 32 VFVDVENKPS 41
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 VQVDIESKP 9
VQ DI S+P
Sbjct: 1824 VQTDIPSEP 1832
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 3 VDIESKPS 10
VD++SKPS
Sbjct: 332 VDLDSKPS 339
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 VQVDIESKP 9
+ +DI+SKP
Sbjct: 1783 ITLDIDSKP 1791
Query: 1 VQVDIESKP 9
++VDI S+P
Sbjct: 417 IKVDITSQP 425
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 VQVDIESKP 9
++VDI S+P
Sbjct: 417 IKVDITSQP 425
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 VQVDIESK 8
+ VDIE+K
Sbjct: 76 IDVDIETK 83
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 VQVDIESK 8
VQ+DI+ K
Sbjct: 1741 VQIDIDGK 1748
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VQVDIESK 8
+ VDIE+K
Sbjct: 88 IDVDIETK 95
125|Sequence|621|630|ESKPSKFRHN
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 3 KPSKFRHN 10
KP RHN
Sbjct: 840 KPEDLRHN 847
>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain
Query: 1 ESKPSKFRHN 10
++KP KF N
Sbjct: 213 DTKPKKFLRN 222
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 ESKPSKF 7
E KPS+F
Sbjct: 2959 EKKPSEF 2965
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 ESKPSKF 7
E KPS+F
Sbjct: 2948 EKKPSEF 2954
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 220 DSKPQKF 226
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 220 DSKPQKF 226
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 220 DSKPQKF 226
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 215 DSKPQKF 221
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 215 DSKPQKF 221
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 222 DSKPQKF 228
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 213 DSKPQKF 219
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 211 DSKPQKF 217
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 212 DSKPQKF 218
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 222 DSKPQKF 228
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 215 DSKPQKF 221
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 217 DSKPQKF 223
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 218 DSKPQKF 224
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 PSKFRH 9
PS FRH
Sbjct: 1177 PSLFRH 1182
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 214 DSKPQKF 220
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SKPSKF 7
+KPSKF
Sbjct: 444 AKPSKF 449
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SKPSKF 7
+KPSKF
Sbjct: 444 AKPSKF 449
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 SKPSKFRHN 10
S+P K RH
Sbjct: 260 SEPPKLRHT 268
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 205 DSKPQKF 211
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 222 DSKPQKF 228
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 222 DSKPQKF 228
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 222 DSKPQKF 228
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 1 ESKPSKF 7
+SKP KF
Sbjct: 207 DSKPQKF 213
126|Sequence|626|635|KFRHNSGSSS
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 FRHNSGSS 9
F HNSG S
Sbjct: 571 FEHNSGYS 578
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 KFRHNSGSSS 10
+ RHN+GS +
Sbjct: 302 RIRHNAGSEN 311
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 1 KFRHNSGSSS 10
+ RHN+GS +
Sbjct: 306 RIRHNAGSDN 315
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 3 RHNSGSS 9
RHN GSS
Sbjct: 283 RHNLGSS 289
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 RHNSGSS 9
RH SGSS
Sbjct: 790 RHVSGSS 796
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KFRHNSGS 8
K+R+N+GS
Sbjct: 1328 KWRNNTGS 1335
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KFRHNSGS 8
K+R+N+GS
Sbjct: 1328 KWRNNTGS 1335
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 FRHNSGS 8
F HN+G+
Sbjct: 3261 FNHNNGN 3267
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 FRHNSGS 8
F HN+G+
Sbjct: 3281 FNHNNGN 3287
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 FRHNSGS 8
F HN+G+
Sbjct: 3311 FNHNNGN 3317
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 FRHNSGS 8
F HN+G+
Sbjct: 3261 FNHNNGN 3267
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 FRHNSGS 8
F HN+G+
Sbjct: 3281 FNHNNGN 3287
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 FRHNSGS 8
F HN+G+
Sbjct: 3311 FNHNNGN 3317
127|Sequence|631|640|SGSSSVDDGS
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SGSSSVDDGS 10
SGSS+VD G+
Sbjct: 2355 SGSSAVDSGT 2364
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SGSSSVDDGS 10
SGSS+VD G+
Sbjct: 2355 SGSSAVDSGT 2364
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SGSSSVDDGS 10
SGSS+VD G+
Sbjct: 2355 SGSSAVDSGT 2364
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SGSSSVDDGS 10
SGSS+VD G+
Sbjct: 2355 SGSSAVDSGT 2364
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 SGSSSVDD 8
SG+ SVDD
Sbjct: 503 SGAPSVDD 510
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 SGSSSVDDGS 10
SGS +D+G+
Sbjct: 260 SGSGHIDNGA 269
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 3 SSSVDD 8
SSSVDD
Sbjct: 529 SSSVDD 534
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 3 SSSVDD 8
SSSVDD
Sbjct: 529 SSSVDD 534
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 3 SSSVDD 8
SSSVDD
Sbjct: 529 SSSVDD 534
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 3 SSSVDD 8
SSSVDD
Sbjct: 529 SSSVDD 534
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GSSSVDDG 9
GS++V DG
Sbjct: 67 GSAAVTDG 74
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GSSSVDDG 9
GS++V DG
Sbjct: 67 GSAAVTDG 74
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 3 SSSVDD 8
SSSVDD
Sbjct: 529 SSSVDD 534
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 3 SSSVDD 8
SSSVDD
Sbjct: 529 SSSVDD 534
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 SGSSSVDDGS 10
+G+S +DDG+
Sbjct: 249 AGASILDDGN 258
128|Sequence|636|645|VDDGSATRSH
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 DDGSATRSH 10
DDG RSH
Sbjct: 316 DDGKGDRSH 324
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 DDGSATRSH 10
DDG RSH
Sbjct: 321 DDGKGDRSH 329
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 2 DDGSATRSH 10
DDG R+H
Sbjct: 296 DDGKGDRNH 304
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 3 DGSATRSH 10
+GS TR H
Sbjct: 130 NGSDTRGH 137
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 DGSATRSH 10
+GS TR H
Sbjct: 130 NGSDTRGH 137
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 3 DGSATRSH 10
+GS TR H
Sbjct: 130 NGSDTRGH 137
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 3 DGSATRSH 10
+GS TR H
Sbjct: 130 NGSDTRGH 137
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 DGSATRSH 10
+GS TR H
Sbjct: 130 NGSDTRGH 137
129|Sequence|641|650|ATRSHAGGSS
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 ATRSHAGGSS 10
TR+H G +S
Sbjct: 514 GTRTHHGATS 523
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 ATRSHAGGSS 10
TR+H G +S
Sbjct: 514 GTRTHHGATS 523
130|Sequence|646|655|AGGSSSGLPE
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 1 AGGSSSGLPE 10
AGG+++G PE
Sbjct: 155 AGGNATGCPE 164
>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AGGSSSGLPE 10
AGG+++G PE
Sbjct: 147 AGGNAAGCPE 156
>sp|HBSAG_HBVG3|LARGE envelope protein|Hepatitis B virus genotype G
Query: 1 AGGSSSGL 8
AGGSSSG+
Sbjct: 142 AGGSSSGI 149
>sp|NSS_BUNSH|NON-STRUCTURAL protein NS-S|Bunyavirus snowshoe hare
Query: 3 GSSSGLPE 10
GSSS +P+
Sbjct: 34 GSSSSMPQ 41
>sp|UL129_HCMVA|UNCHARACTERIZED protein UL129|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 SSGLPE 10
SSG+PE
Sbjct: 111 SSGMPE 116
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 GSSSGLPE 10
G +SGLPE
Sbjct: 158 GHNSGLPE 165
>sp|NSS_BUNL8|NON-STRUCTURAL protein NS-S|Bunyavirus La Crosse (isolate Human/United
Query: 3 GSSSGLPE 10
GSSS +P+
Sbjct: 34 GSSSSMPQ 41
>sp|NSS_BUNLC|NON-STRUCTURAL protein NS-S|Bunyavirus La Crosse
Query: 3 GSSSGLPE 10
GSSS +P+
Sbjct: 34 GSSSSMPQ 41
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 AGGSSSGLPE 10
AGG + LPE
Sbjct: 2274 AGGREASLPE 2283
>sp|NSS_BUNL7|NON-STRUCTURAL protein NS-S|Bunyavirus La Crosse (isolate Aedes
Query: 3 GSSSGLPE 10
GSSS +P+
Sbjct: 34 GSSSTMPQ 41
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 142 AGGSSSG 148
>sp|HBSAG_HBVC8|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 AGGSSSG 7
+GGSSSG
Sbjct: 707 SGGSSSG 713
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 142 AGGSSSG 148
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 142 AGGSSSG 148
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVC1|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVCJ|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVC5|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVC3|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVC2|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVC9|LARGE envelope protein|Hepatitis B virus genotype C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5070 GGTSSG 5075
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5047 GGTSSG 5052
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5056 GGTSSG 5061
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5043 GGTSSG 5048
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5081 GGTSSG 5086
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5101 GGTSSG 5106
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GGSSSG 7
GG+SSG
Sbjct: 5131 GGTSSG 5136
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 132 AGGSSSG 138
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 AGGSSSGLPE 10
+GG G+P+
Sbjct: 55 SGGRKQGIPK 64
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 143 AGGSSSG 149
131|Sequence|651|660|SGLPEGKSSA
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 SGLPEGKS 8
+ LP+GKS
Sbjct: 115 TALPDGKS 122
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 1 SGLPEGKSSA 10
S LP+ KSSA
Sbjct: 39 SDLPKQKSSA 48
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LPEGKSSA 10
LP G SSA
Sbjct: 445 LPRGPSSA 452
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SGLPEG 6
+GLPEG
Sbjct: 287 NGLPEG 292
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SGLPEG 6
+GLPEG
Sbjct: 287 NGLPEG 292
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 SGLPEG 6
+GLPEG
Sbjct: 287 NGLPEG 292
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 SGLPEG 6
+GLPEG
Sbjct: 280 NGLPEG 285
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 SGLPEGKSSA 10
SGLPE + A
Sbjct: 241 SGLPEDEWKA 250
132|Sequence|656|665|GKSSATKWSK
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 3 SSATKWSK 10
+SAT+WSK
Sbjct: 80 ASATEWSK 87
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 GKSSATKWSK 10
G+S A +W K
Sbjct: 228 GRSFALRWPK 237
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GKSSATKWSK 10
G+S A +W K
Sbjct: 215 GRSFALRWPK 224
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 KSSATKWS 9
K SAT WS
Sbjct: 1029 KLSATDWS 1036
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 972 ADATKWS 978
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 972 ADATKWS 978
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 971 ADATKWS 977
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 971 ADATKWS 977
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 971 ADATKWS 977
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 972 ADATKWS 978
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 971 ADATKWS 977
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 971 ADATKWS 977
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 2 KSSATKW 8
KSSA +W
Sbjct: 581 KSSALQW 587
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 SSATKWS 9
+ ATKWS
Sbjct: 971 ADATKWS 977
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 SATKWS 9
SAT WS
Sbjct: 1203 SATAWS 1208
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 GKSSATKWS 9
G+S + KW+
Sbjct: 1547 GQSISVKWA 1555
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 4 SATKWS 9
SAT WS
Sbjct: 1202 SATAWS 1207
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 1 GKSSATKWS 9
GK++++ WS
Sbjct: 5 GKTNSSYWS 13
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 SATKWS 9
SAT WS
Sbjct: 1205 SATAWS 1210
133|Sequence|661|670|TKWSKEATAG
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 TKWSKEATA 9
+KW++EA A
Sbjct: 390 SKWAREAKA 398
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 TKWSKEATA 9
+KW++EA A
Sbjct: 391 SKWAREARA 399
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 TKWSKEATA 9
+KW++EA A
Sbjct: 391 SKWAREARA 399
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 KWSKEA 7
KW+KEA
Sbjct: 391 KWAKEA 396
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 KWSKEATAG 10
KWSK +T G
Sbjct: 4 KWSKCSTVG 12
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 392 SKWAKE 397
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 392 SKWAKE 397
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 SKEATAG 10
SKE+T+G
Sbjct: 833 SKESTSG 839
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 SKEATAG 10
SKE+T+G
Sbjct: 833 SKESTSG 839
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 392 SKWAKE 397
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 392 SKWAKE 397
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 392 SKWAKE 397
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 392 SKWAKE 397
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 393 SKWAKE 398
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 TKWSKE 6
+KW+KE
Sbjct: 393 SKWAKE 398
134|Sequence|666|675|EATAGKKSKS
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 ATAGKKS 8
ATAGK+S
Sbjct: 39 ATAGKQS 45
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 ATAGKKS 8
ATAGK+S
Sbjct: 39 ATAGKQS 45
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 ATAGKKS 8
ATAGK+S
Sbjct: 39 ATAGKQS 45
135|Sequence|671|680|KKSKSGKLRK
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 KKSKSGKLR 9
K+ +SG+LR
Sbjct: 236 KQGRSGRLR 244
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 KKSKSGKLR 9
K+ +SG+LR
Sbjct: 236 KQGRSGRLR 244
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 KKSKSGKLR 9
K+ +SG+LR
Sbjct: 236 KQGRSGRLR 244
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 KKSKSGKLR 9
K+ +SG+LR
Sbjct: 236 KQGRSGRLR 244
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 KSKSGKLR 9
K+K GKLR
Sbjct: 296 KTKYGKLR 303
Query: 3 SKSGKL 8
SKSGKL
Sbjct: 1320 SKSGKL 1325
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 SKSGKL 8
SKSGKL
Sbjct: 1311 SKSGKL 1316
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KKSKSGKLR 9
+K+K+GK R
Sbjct: 1380 EKNKAGKRR 1388
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 KKSKSGKLR 9
+K+K+GK R
Sbjct: 1380 EKNKAGKRR 1388
136|Sequence|676|685|GKLRKKGNMK
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 GKLRKKGN 8
GKLR KG+
Sbjct: 1087 GKLRAKGH 1094
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 GKLRKKGN 8
GKLR KG+
Sbjct: 1020 GKLRAKGH 1027
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 GKLRKKGN 8
GKLR KG+
Sbjct: 1096 GKLRAKGH 1103
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 GKLRKKGN 8
GKLR KG+
Sbjct: 1096 GKLRAKGH 1103
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 GKLRKKG 7
GKLR KG
Sbjct: 2196 GKLRLKG 2202
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 GKLRKKGN 8
GK+R KG+
Sbjct: 960 GKIRAKGH 967
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 GKLRKKG 7
GKLR KG
Sbjct: 2195 GKLRLKG 2201
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 GKLRKKGNMK 10
GK+ K NMK
Sbjct: 352 GKIPKTKNMK 361
137|Sequence|681|690|KGNMKINETR
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 KGNMKIN 7
KG MK+N
Sbjct: 100 KGKMKLN 106
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 NMKINET 9
N+K NET
Sbjct: 380 NLKTNET 386
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 4 MKINET 9
MKIN+T
Sbjct: 55 MKINQT 60
>sp|VU51_HHV7J|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 7 (strain JI)
Query: 4 MKINETR 10
+K+NET+
Sbjct: 113 IKVNETK 119
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 KGNMKINET 9
KG M NET
Sbjct: 177 KGTMVKNET 185
138|Sequence|686|695|INETREDMDA
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ETREDMDA 10
E R+D+DA
Sbjct: 83 EIRQDLDA 90
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ETREDMDA 10
E R+D+DA
Sbjct: 83 EIRQDLDA 90
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 ETREDMDA 10
E R+D+DA
Sbjct: 83 EIRQDLDA 90
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 INETREDMDA 10
IN+ R+D +A
Sbjct: 510 INDLRDDFNA 519
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 INETREDMDA 10
INE D DA
Sbjct: 207 INEEAADWDA 216
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 INETREDMDA 10
INE D DA
Sbjct: 207 INEEAADWDA 216
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 INETREDMDA 10
INE D DA
Sbjct: 207 INEEAADWDA 216
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 1 INETRED 7
I+ET+ED
Sbjct: 101 IDETKED 107
139|Sequence|691|700|EDMDAQLLEQ
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 DMDAQLLE 9
+MDA+LLE
Sbjct: 404 NMDARLLE 411
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 DMDAQLLE 9
+MD QLLE
Sbjct: 403 NMDPQLLE 410
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 DMDAQLLE 9
+MD QLLE
Sbjct: 498 NMDPQLLE 505
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3103 NMEAQLIRQ 3111
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3103 NMEAQLIRQ 3111
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3103 NMEAQLIRQ 3111
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3106 NMEAQLIRQ 3114
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3102 NMEAQLIRQ 3110
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 1 EDMDAQLLEQ 10
E+M A LL+Q
Sbjct: 13 EEMAASLLDQ 22
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DMDAQLLEQ 10
+M+AQL+ Q
Sbjct: 3105 NMEAQLIRQ 3113
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 1 EDMDAQLLEQ 10
E+M A LL+Q
Sbjct: 13 EEMAASLLDQ 22
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 MDAQLLEQ 10
MD+ +LEQ
Sbjct: 395 MDSTILEQ 402
140|Sequence|696|705|QLLEQQSTNS
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 QLLEQQSTNS 10
Q+LE TNS
Sbjct: 577 QMLEHAKTNS 586
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 QLLEQQSTNS 10
Q++EQ TN+
Sbjct: 577 QMIEQAKTNN 586
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LLEQQSTN 9
L+E+Q TN
Sbjct: 362 LVEEQDTN 369
>sp|BNL2A_EBVG|PROTEIN BNLF2a|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LLEQQST 8
LLEQQS+
Sbjct: 9 LLEQQSS 15
>sp|BNL2A_EBVB9|PROTEIN BNLF2a|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LLEQQST 8
LLEQQS+
Sbjct: 9 LLEQQSS 15
>sp|BNL2A_EBVA8|PROTEIN BNLF2a|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LLEQQST 8
LLEQQS+
Sbjct: 9 LLEQQSS 15
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LLEQQSTN 9
L+E+Q TN
Sbjct: 362 LVEEQDTN 369
141|Sequence|701|710|QSTNSSEFEA
>sp|VP7_ROTHT|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 QSTNSSEFE 9
Q+TN++ FE
Sbjct: 208 QTTNTATFE 216
142|Sequence|706|715|SEFEAPSLSD
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 EFEAPSL 8
E+E PSL
Sbjct: 175 EYECPSL 181
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 EAPSLSD 10
+APSL+D
Sbjct: 1101 DAPSLTD 1107
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 EAPSLSD 10
+APSL+D
Sbjct: 1101 DAPSLTD 1107
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SEFEAPSLSD 10
S F PS+SD
Sbjct: 204 SAFACPSVSD 213
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FEAPSLSD 10
F PS+SD
Sbjct: 245 FNTPSVSD 252
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 1 SEFEAPSLSD 10
S FE P+L +
Sbjct: 36 SHFEPPTLHE 45
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 1 SEFEAPSLSD 10
S FE P+L +
Sbjct: 36 SHFEPPTLHE 45
143|Sequence|711|720|PSLSDSMPSV
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 PSLSDSMPSV 10
P+L D +PS+
Sbjct: 122 PTLGDQLPSL 131
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PSLSDSMPSV 10
P +++S PSV
Sbjct: 1213 PFITESKPSV 1222
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PSLSDSMPSV 10
P +++S PSV
Sbjct: 1213 PFITESKPSV 1222
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 PSLSDSMPSV 10
PS++ S PS+
Sbjct: 165 PSITQSQPSI 174
144|Sequence|716|725|SMPSVADSHS
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 SMPSVADSH 9
S+P+V SH
Sbjct: 271 SLPTVERSH 279
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SMPSVADSH 9
S+P+V SH
Sbjct: 271 SLPTVERSH 279
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 PSVADS 8
PS+ADS
Sbjct: 245 PSIADS 250
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 MPSVADSHS 10
+PS+ SH+
Sbjct: 537 LPSMVSSHN 545
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 MPSVADSHS 10
+PS+ SH+
Sbjct: 537 LPSMVSSHN 545
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 5 VADSHS 10
VADSH+
Sbjct: 3144 VADSHN 3149
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MPSVADSH 9
MP + D H
Sbjct: 258 MPRIQDGH 265
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 1 SMPSVADSHS 10
S+PSVA S S
Sbjct: 380 SLPSVASSAS 389
145|Sequence|721|730|ADSHSSHFSE
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 ADSHSSHFSE 10
AD+ SHF E
Sbjct: 327 ADAVKSHFLE 336
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 3 SHSSHFSE 10
SHS FSE
Sbjct: 577 SHSKRFSE 584
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 ADSHSSH 7
AD HS H
Sbjct: 1263 ADRHSEH 1269
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 DSHSSHFSE 10
DS+ SH+S+
Sbjct: 516 DSNRSHYSD 524
146|Sequence|726|735|SHFSEFSCSD
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 1 SHFSEFSCSD 10
SH +EF C D
Sbjct: 430 SHSTEFQCQD 439
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 HFSEFSCS 9
H+S F C+
Sbjct: 233 HYSAFECA 240
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 HFSEFSCS 9
H+S F C+
Sbjct: 228 HYSAFECA 235
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 HFSEFSC 8
HF EF C
Sbjct: 482 HFHEFVC 488
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 HFSEFSC 8
HF EF C
Sbjct: 482 HFHEFIC 488
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 HFSEFSC 8
HF EF C
Sbjct: 482 HFHEFIC 488
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 HFSEFSCS 9
HF ++ CS
Sbjct: 36 HFKQYECS 43
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 HFSEFSCS 9
HF ++ CS
Sbjct: 36 HFKQYECS 43
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 2 HFSEFSCS 9
HF ++ CS
Sbjct: 36 HFKQYECS 43
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 HFSEFSCS 9
HF ++ CS
Sbjct: 36 HFKQYECS 43
>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 330 SNFDESSCT 338
>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|FUS_MEASA|FUSION glycoprotein F0|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 SHFSEFSCS 9
S+F E SC+
Sbjct: 327 SNFDESSCT 335
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 258 SHYEECSC 265
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 274 SHYEECSC 281
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 1 SHFSEFSC 8
SH+ E SC
Sbjct: 259 SHYEECSC 266
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HFSEFSCS 9
HFS+F S
Sbjct: 644 HFSDFGTS 651
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 HFSEFSCS 9
HFS+F S
Sbjct: 644 HFSDFGTS 651
147|Sequence|731|740|FSCSDLESMK
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 FSCSDLESMK 10
F CSD+ MK
Sbjct: 1139 FLCSDMFLMK 1148
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 FSCSDLE 7
F+C+DL+
Sbjct: 73 FNCTDLD 79
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 FSCSDLE 7
F+C+DL+
Sbjct: 66 FNCTDLD 72
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 3 CSDLESMK 10
C DLES +
Sbjct: 257 CCDLESWR 264
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 3 CSDLESMK 10
C DLES +
Sbjct: 257 CCDLESWR 264
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 2 SCSDLESM 9
+CSD+E++
Sbjct: 53 ACSDMETL 60
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SCSDLESM 9
+CSD+E++
Sbjct: 53 ACSDMETL 60
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 3 CSDLESMK 10
C DLES +
Sbjct: 255 CCDLESWR 262
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 3 CSDLESMK 10
C DLES +
Sbjct: 255 CCDLESWR 262
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 CSDLES 8
CSDLE+
Sbjct: 23 CSDLEN 28
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 CSDLES 8
CSDLE+
Sbjct: 23 CSDLEN 28
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 SDLESMK 10
+DLES+K
Sbjct: 2162 TDLESLK 2168
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 CSDLES 8
CSDLE+
Sbjct: 24 CSDLEN 29
148|Sequence|736|745|LESMKTSCSH
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 4 MKTSCS 9
MKTSCS
Sbjct: 565 MKTSCS 570
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 4 MKTSCS 9
MKTSCS
Sbjct: 566 MKTSCS 571
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 4 MKTSCS 9
MKTSCS
Sbjct: 566 MKTSCS 571
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 4 MKTSCS 9
MKTSCS
Sbjct: 565 MKTSCS 570
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 LESMKTSC 8
L+SMK SC
Sbjct: 561 LKSMKDSC 568
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 LESMKTSC 8
L+SMK SC
Sbjct: 561 LKSMKDSC 568
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 LESMKTSCSH 10
LES K SC H
Sbjct: 563 LESHKKSCPH 572
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 LESMKTSC 8
LES+ T C
Sbjct: 435 LESLATRC 442
>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)
Query: 3 SMKTSC 8
SMKT+C
Sbjct: 189 SMKTAC 194
>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)
Query: 3 SMKTSC 8
SMKT+C
Sbjct: 189 SMKTAC 194
>sp|TRX2_HHV6U|TRIPLEX capsid protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 SMKTSC 8
SMKT+C
Sbjct: 190 SMKTAC 195
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 SMKTSC 8
SMKT+C
Sbjct: 190 SMKTAC 195
149|Sequence|741|750|TSCSHGSSDY
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T CS GSSD
Sbjct: 1121 TPCSCGSSD 1129
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 TSCSHGSSDY 10
T C H DY
Sbjct: 1111 TCCEHSGQDY 1120
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SCSHGSSD 9
+C+HG+ D
Sbjct: 174 ACNHGAED 181
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TSCSHGSSD 9
T+CSH + D
Sbjct: 5617 TACSHAAVD 5625
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TSCSHGSSD 9
T+CSH + D
Sbjct: 5608 TACSHAAVD 5616
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TSCSHGSSD 9
T+CSH + D
Sbjct: 5631 TACSHAAVD 5639
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TSCSHGSSD 9
T+CSH + D
Sbjct: 5303 TACSHAAVD 5311
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 TSCSHGSSD 9
T CS GSSD
Sbjct: 1122 TPCSCGSSD 1130
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 SCSHGSS 8
SC+HGS+
Sbjct: 1165 SCTHGSA 1171
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1126 TPCTCGSSD 1134
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1121 TPCTCGSSD 1129
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 SCSHGSSD 9
+C+HG D
Sbjct: 175 ACAHGFED 182
>sp|TRM2_HCMVM|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 SCSHG 6
+CSHG
Sbjct: 119 TCSHG 123
>sp|TRM2_HCMVA|TRIPARTITE terminase subunit 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SCSHG 6
+CSHG
Sbjct: 119 TCSHG 123
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TSCSHGSS 8
T+ SHGS+
Sbjct: 434 TATSHGSA 441
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TSCSHGSS 8
T+ SHGS+
Sbjct: 434 TATSHGSA 441
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TSCSHGSS 8
T+ SHGS+
Sbjct: 433 TATSHGSA 440
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1125 TPCNCGSSD 1133
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 TSCSHGS 7
+CSHGS
Sbjct: 627 VACSHGS 633
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 TSCSHGSSD 9
+SC GS+D
Sbjct: 152 SSCRRGSAD 160
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 SCSHGSSDY 10
SC HG Y
Sbjct: 569 SCPHGQCPY 577
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TSCSHGSSDY 10
T +HG SD+
Sbjct: 621 TFSAHGKSDF 630
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TSCSHGSSDY 10
T +HG SD+
Sbjct: 621 TFSAHGKSDF 630
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 TSCSHG 6
T+C HG
Sbjct: 99 TACVHG 104
>sp|TRM2_HHV11|TRIPARTITE terminase subunit 2|Human herpesvirus 1 (strain 17)
Query: 1 TSCSHG 6
T+C HG
Sbjct: 99 TACVHG 104
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 TSCSHGSSD 9
T C+ GSSD
Sbjct: 1123 TPCTCGSSD 1131
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 TSCSHGS 7
T C HG+
Sbjct: 2103 TYCDHGA 2109
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CSHGSSDY 10
CSHG Y
Sbjct: 5049 CSHGDRFY 5056
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CSHGSSDY 10
CSHG Y
Sbjct: 5069 CSHGDRFY 5076
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TSCSHGSSD 9
T C+ GS+D
Sbjct: 1122 TPCTCGSAD 1130
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 TSCSHGSSD 9
T C+ G+SD
Sbjct: 1125 TPCTCGASD 1133
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 TSCSHGSSD 9
T C+ G+SD
Sbjct: 1119 TPCTCGASD 1127
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 TSCSHGSSD 9
T C+ GS+D
Sbjct: 1122 TRCTCGSAD 1130
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CSHGSSDY 10
CSHG Y
Sbjct: 5099 CSHGDRFY 5106
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TSCSHGSSD 9
T C+ G+SD
Sbjct: 1121 TPCTCGASD 1129
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 TSCSHGSSD 9
T C+ G+SD
Sbjct: 1121 TPCTCGASD 1129
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 4 SHGSSDY 10
+HG +DY
Sbjct: 257 AHGCTDY 263
150|Sequence|746|755|GSSDYHTRFA
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 1 GSSDYHTRFA 10
GSS Y+ RFA
Sbjct: 219 GSSKYNRRFA 228
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 DYHTRF 9
DYHT F
Sbjct: 680 DYHTEF 685
>sp|NEP_INBYA|NUCLEAR export protein|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 SSDYHTR 8
S+DYH R
Sbjct: 53 STDYHQR 59
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 GSSDYHTRF 9
GSS YH F
Sbjct: 214 GSSKYHQSF 222
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 GSSDYHTRF 9
GSS Y+ RF
Sbjct: 219 GSSKYNRRF 227
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 GSSDYHTRF 9
G S+Y+ RF
Sbjct: 143 GRSNYNNRF 151
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 GSSDYHTRF 9
GSS Y+ RF
Sbjct: 219 GSSKYNRRF 227
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 GSSDYHTRF 9
GSS Y+ RF
Sbjct: 219 GSSKYNRRF 227
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 GSSDYHTRF 9
GSS Y+ RF
Sbjct: 219 GSSKYNRRF 227
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 SSDYHTRFA 10
SSD RFA
Sbjct: 2224 SSDIKVRFA 2232
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 GSSDYHTRF 9
GSS Y RF
Sbjct: 219 GSSKYDRRF 227
>sp|NEP_INBLE|NUCLEAR export protein|Influenza B virus (strain B/Lee/1940)
Query: 2 SSDYHTR 8
S+DYH +
Sbjct: 53 STDYHQK 59
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 5 YHTRFA 10
+HTRF+
Sbjct: 110 FHTRFS 115
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 5 YHTRFA 10
+HTRF+
Sbjct: 110 FHTRFS 115
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 DYHTRFA 10
DY+T+F+
Sbjct: 567 DYYTQFS 573
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 DYHTRFA 10
DY+T+F+
Sbjct: 567 DYYTQFS 573
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 GSSDYHTR 8
GSSD H +
Sbjct: 211 GSSDLHEK 218
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 GSSDYHT 7
GS+DY++
Sbjct: 1430 GSTDYYS 1436
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 YHTRFA 10
YH R+A
Sbjct: 1924 YHVRYA 1929
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 4 DYHTRFA 10
DY +RFA
Sbjct: 46 DYSSRFA 52
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 SSDYHTRF 9
S+D HT F
Sbjct: 317 STDKHTNF 324
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 220 SSNYNRRF 227
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 GSSDYHTRF 9
SS+Y+ RF
Sbjct: 218 ASSNYNRRF 226
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GSSDYHT 7
G+S YH+
Sbjct: 32 GASSYHS 38
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 2 SSDYHTRF 9
SS+Y+ RF
Sbjct: 219 SSNYNRRF 226
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 GSSDYHT 7
G+S YH+
Sbjct: 30 GASSYHS 36
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 SSDYHTRFA 10
S D H RF+
Sbjct: 403 SRDLHKRFS 411
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 SSDYHTRFA 10
S D H RF+
Sbjct: 403 SRDLHKRFS 411
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 SSDYHTRF 9
S+D HT F
Sbjct: 317 STDKHTNF 324
151|Sequence|751|760|HTRFATVNIL
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TRFATVNI 9
TRFA VNI
Sbjct: 272 TRFAPVNI 279
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 TRFATVNI 9
TRFA VNI
Sbjct: 272 TRFAPVNI 279
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HTRFATVNI 9
+T+F T+NI
Sbjct: 104 NTKFKTLNI 112
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 RFATVNIL 10
RF T N+L
Sbjct: 1146 RFLTANLL 1153
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 HTRFATVNI 9
+T+F T+NI
Sbjct: 104 NTKFKTLNI 112
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 RFATVNIL 10
RF T N+L
Sbjct: 1057 RFVTENVL 1064
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 RFATVNIL 10
RF T N+L
Sbjct: 1057 RFVTENVL 1064
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 HTRFATVNI 9
HT ATV +
Sbjct: 509 HTALATVTL 517
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 HTRFATVNI 9
HT ATV +
Sbjct: 506 HTALATVTL 514
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 HTRFATVNI 9
HT ATV +
Sbjct: 506 HTALATVTL 514
152|Sequence|756|765|TVNILPEVEN
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 TVNILPEV 8
TVN LPEV
Sbjct: 5355 TVNALPEV 5362
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 TVNILPE 7
TVN LPE
Sbjct: 5330 TVNALPE 5336
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TVNILPEV 8
T+N LPE+
Sbjct: 5713 TINALPEL 5720
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TVNILPE 7
TVN LPE
Sbjct: 5660 TVNALPE 5666
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TVNILPEV 8
T+N LPE+
Sbjct: 5693 TINALPEL 5700
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TVNILPEV 8
T+N LPE+
Sbjct: 5743 TINALPEL 5750
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TVNILPEV 8
T+N LPE+
Sbjct: 5655 TINALPEM 5662
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 NILPEVE 9
N++PEV+
Sbjct: 52 NVMPEVQ 58
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TVNILPE 7
TVN LPE
Sbjct: 5683 TVNALPE 5689
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TVNILPE 7
T+N LPE
Sbjct: 5669 TINALPE 5675
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 NILPEVEN 10
N+LPE N
Sbjct: 1777 NLLPEFVN 1784
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 2 VNILPEVE 9
V++LPE+E
Sbjct: 126 VDLLPELE 133
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 TVNILP 6
T+N+LP
Sbjct: 1166 TINLLP 1171
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 ILPEVE 9
+LPEVE
Sbjct: 511 LLPEVE 516
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 ILPEVE 9
+LPEVE
Sbjct: 511 LLPEVE 516
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 TVNILP 6
T+N+LP
Sbjct: 1166 TINLLP 1171
153|Sequence|761|770|PEVENDRLEN
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PEVENDRLEN 10
PE N+R EN
Sbjct: 66 PETRNERREN 75
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 EVENDRL 8
EVEN+RL
Sbjct: 1450 EVENNRL 1456
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 1 PEVEND 6
PEVEND
Sbjct: 69 PEVEND 74
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1651 PEIEDD 1656
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PEVEND 6
PE+E+D
Sbjct: 1241 PEIEDD 1246
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 EVENDRLEN 10
EV+ D +EN
Sbjct: 1533 EVDKDEIEN 1541
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PEVEND 6
PE+E+D
Sbjct: 146 PEIESD 151
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PEVEND 6
PE+E+D
Sbjct: 146 PEIESD 151
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PEVEND 6
PE+E+D
Sbjct: 146 PEIESD 151
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 2 EVENDR 7
+VENDR
Sbjct: 700 DVENDR 705
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 3 VENDRLEN 10
V ND L+N
Sbjct: 119 VNNDHLDN 126
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 VENDRLEN 10
V ND L+N
Sbjct: 119 VNNDHLDN 126
154|Sequence|766|775|DRLENSPHQC
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 LENSPHQ 9
LENS HQ
Sbjct: 653 LENSTHQ 659
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DRLENSPHQC 10
D+ N+P QC
Sbjct: 4141 DQTCNTPTQC 4150
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DRLENSPHQC 10
D+ N+P QC
Sbjct: 4141 DQTCNTPTQC 4150
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RLENSPHQC 10
R+E S +QC
Sbjct: 2653 RVEESIYQC 2661
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RLENSPHQC 10
R+E S +QC
Sbjct: 2653 RVEESIYQC 2661
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RLENSPHQC 10
R+E S +QC
Sbjct: 2653 RVEESIYQC 2661
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 LENSPHQ 9
LENS HQ
Sbjct: 354 LENSDHQ 360
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RLENSPHQC 10
R+E S +QC
Sbjct: 2653 RVEESIYQC 2661
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RLENSPHQC 10
R+E S +QC
Sbjct: 2653 RVEESIYQC 2661
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RLENSPHQC 10
R+E S +QC
Sbjct: 2653 RVEESIYQC 2661
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 DRLENSPHQ 9
D +EN P Q
Sbjct: 96 DSIENIPFQ 104
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 RLENSPHQC 10
RL+ SPH
Sbjct: 328 RLDESPHSA 336
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RLENSPHQC 10
RL+ SPH
Sbjct: 328 RLDESPHSA 336
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RLENSPHQC 10
RL+ SPH
Sbjct: 328 RLDESPHSA 336
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 DRLENSPH 8
D+LEN+ H
Sbjct: 1439 DKLENNTH 1446
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 DRLENSPHQ 9
D +EN P Q
Sbjct: 97 DSIENLPFQ 105
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 DRLENSPHQ 9
D +EN P Q
Sbjct: 97 DSIENLPFQ 105
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 1 DRLENSPHQ 9
+ LENS H+
Sbjct: 405 NELENSAHE 413
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 DRLENSP 7
D+LE SP
Sbjct: 2798 DKLEQSP 2804
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DRLENSP 7
+RL NSP
Sbjct: 2319 ERLTNSP 2325
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DRLENSP 7
+RL NSP
Sbjct: 2316 ERLTNSP 2322
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 LENSPH 8
LEN PH
Sbjct: 944 LENLPH 949
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 DRLENSP 7
+RL NSP
Sbjct: 2344 ERLTNSP 2350
155|Sequence|771|780|SPHQCSISVV
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPHQCSISVV 10
+PH C + +V
Sbjct: 310 NPHSCKVKIV 319
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 SPHQCSISVV 10
+PH C + +V
Sbjct: 310 NPHSCKVKIV 319
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 SPHQCSISVV 10
+PH C + +V
Sbjct: 310 NPHSCKVKIV 319
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SPHQCSISVV 10
+PH C + +V
Sbjct: 310 NPHSCKVKIV 319
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SPHQCS 6
SPH CS
Sbjct: 178 SPHWCS 183
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SPHQCS 6
SPH CS
Sbjct: 178 SPHWCS 183
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 1 SPHQCS 6
SPH CS
Sbjct: 178 SPHWCS 183
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 1 SPHQCS 6
SPH CS
Sbjct: 178 SPHWCS 183
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SPHQCS 6
SPH CS
Sbjct: 178 SPHWCS 183
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 PHQCSIS 8
P+QC++S
Sbjct: 405 PYQCNLS 411
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 PHQCSIS 8
P+QC++S
Sbjct: 406 PYQCNLS 412
156|Sequence|776|785|SISVVTQTAS
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 SISVVTQTAS 10
SIS VT+T S
Sbjct: 1899 SISEVTETTS 1908
157|Sequence|781|790|TQTASCSEVS
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 QTASCSEV 9
+ A CSEV
Sbjct: 608 ELAKCSEV 615
158|Sequence|786|795|CSEVSQLNHI
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SEVSQLNHI 10
SEVS L H+
Sbjct: 1058 SEVSSLTHL 1066
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SEVSQLNHI 10
SEVS L H+
Sbjct: 1058 SEVSSLTHL 1066
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SEVSQLNHI 10
SEVS L H+
Sbjct: 1058 SEVSSLTHL 1066
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SEVSQLNHI 10
SEVS L H+
Sbjct: 1058 SEVSSLTHL 1066
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 SEVSQLNHI 10
SE+S L+H+
Sbjct: 1058 SEISSLSHL 1066
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 SEVSQLNHI 10
SE+S L+H+
Sbjct: 1058 SEISSLSHL 1066
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 CSEVSQLNHI 10
C E + NHI
Sbjct: 1756 CFEYTHQNHI 1765
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 CSEVSQLNH 9
CS + +L+H
Sbjct: 129 CSRLEKLDH 137
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 SEVSQLNHI 10
SEV+ L H+
Sbjct: 1048 SEVNSLEHL 1056
159|Sequence|791|800|QLNHIAEEHG
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 QLNHIAEEHG 10
QL IAEE G
Sbjct: 994 QLECIAEEQG 1003
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 NHIAEEH 9
NH+A EH
Sbjct: 3046 NHMAGEH 3052
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILSEN 857
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 NHIAEEH 9
NH+A EH
Sbjct: 3043 NHMAGEH 3049
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILSEN 857
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 QLNHIAEEHG 10
+LN I EE+G
Sbjct: 868 ELNAILEENG 877
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 QLNHIAEEHG 10
+LN I EE+G
Sbjct: 868 ELNAILEENG 877
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 QLNHIAEEHG 10
+LN I EE+G
Sbjct: 864 ELNAILEENG 873
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 569 ELNHILSEN 577
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILSEN 857
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILSEN 857
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILSEN 857
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILSEN 857
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 1 QLNHIAE 7
+LNHI E
Sbjct: 292 ELNHIRE 298
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 1 QLNHIAE 7
+LNHI E
Sbjct: 292 ELNHIRE 298
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 1 QLNHIAE 7
+LNHI E
Sbjct: 294 ELNHIRE 300
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 1 QLNHIAE 7
+LNHI E
Sbjct: 294 ELNHIRE 300
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 HIAEEHG 10
H AEE G
Sbjct: 987 HCAEEQG 993
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 HIAEEHG 10
H AEE G
Sbjct: 994 HCAEEQG 1000
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 HIAEEHG 10
H AEE G
Sbjct: 990 HCAEEQG 996
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 QLNHIAEEH 9
+LNHI E+
Sbjct: 849 ELNHILAEN 857
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 3 NHIAEEH 9
NH E+H
Sbjct: 333 NHAGEDH 339
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 QLNHIAEE 8
+LNHI E+
Sbjct: 530 RLNHIEEQ 537
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 QLNHIAEE 8
+LNHI E+
Sbjct: 532 RLNHIEEQ 539
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 3 NHIAEEH 9
NH+ E H
Sbjct: 216 NHLTETH 222
160|Sequence|796|805|AEEHGNNGIK
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 AEEHGN 6
AE+HGN
Sbjct: 98 AEDHGN 103
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 ERGNHGVK 350
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 ERGNHGVK 350
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNQGVK 350
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNQGVK 350
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNQGVK 350
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 EHGNNGIK 10
E GN+G+K
Sbjct: 343 EKGNHGVK 350
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 2 EEHGNNG 8
EE G NG
Sbjct: 585 EEEGENG 591
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 AEEHGNNGIK 10
AE H +G+K
Sbjct: 385 AEYHNESGLK 394
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 AEEHGNNGIK 10
AE H +G+K
Sbjct: 385 AEYHNESGLK 394
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 4 HGNNG 8
HG+NG
Sbjct: 302 HGDNG 306
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 4 HGNNG 8
HG+NG
Sbjct: 302 HGDNG 306
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 EEHGNNG 8
EE G NG
Sbjct: 581 EEEGENG 587
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 HGNNG 8
HGN+G
Sbjct: 1102 HGNDG 1106
>sp|VE5B_HPV6C|PROBABLE protein E5B|Human papillomavirus type 6c
Query: 4 HGNNG 8
HG+NG
Sbjct: 64 HGDNG 68
>sp|VE5B_HPV11|PROBABLE protein E5B|Human papillomavirus 11
Query: 4 HGNNG 8
HG+NG
Sbjct: 64 HGDNG 68
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 3 EHGNNGIK 10
E GN G+K
Sbjct: 343 ERGNPGVK 350
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 5 GNNGIK 10
G NGIK
Sbjct: 245 GRNGIK 250
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 HGNNG 8
HGN+G
Sbjct: 2267 HGNSG 2271
161|Sequence|801|810|NNGIKPNVDL
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 IKPNVDL 10
+ PNVDL
Sbjct: 664 VTPNVDL 670
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 IKPNVDL 10
+ PNVDL
Sbjct: 664 VTPNVDL 670
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 NGIKPNVDL 10
NG+K VD+
Sbjct: 776 NGVKQTVDV 784
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 4 IKPNVDL 10
++PN+DL
Sbjct: 638 LRPNLDL 644
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 4 IKPNVDL 10
++PN+DL
Sbjct: 638 LRPNLDL 644
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 NNGIKPNV 8
NN + PN+
Sbjct: 24 NNAVIPNI 31
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 NGIKPNVDL 10
NG+KP D+
Sbjct: 116 NGLKPVYDM 124
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 GIKPNVD 9
G+K NVD
Sbjct: 2140 GVKANVD 2146
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 GIKPNVD 9
G+K NVD
Sbjct: 2140 GVKANVD 2146
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 NGIKPNVDL 10
NG+KP D+
Sbjct: 116 NGLKPVYDM 124
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 4 IKPNVDL 10
+KPN DL
Sbjct: 1232 VKPNFDL 1238
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NGIKPNV 8
+GI+PN+
Sbjct: 1272 HGIEPNI 1278
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 NGIKPNVDL 10
NG+ N+DL
Sbjct: 172 NGVISNLDL 180
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 NNGIKPN 7
N+GIKP+
Sbjct: 215 NHGIKPS 221
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 NGIKPNVD 9
NG+K +VD
Sbjct: 773 NGVKHSVD 780
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 NGIKPNV 8
+GI PNV
Sbjct: 1272 HGIDPNV 1278
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 NGIKPNV 8
+GI PNV
Sbjct: 1272 HGIDPNV 1278
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 NNGIKPNV 8
++GI PN+
Sbjct: 1272 SHGIDPNI 1279
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 NNGIKPN 7
NN I PN
Sbjct: 273 NNNIYPN 279
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 KPNVDL 10
KP+VDL
Sbjct: 26 KPDVDL 31
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 5 KPNVDL 10
KP+VDL
Sbjct: 26 KPDVDL 31
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 NGIKPNV 8
+GI PN+
Sbjct: 1276 HGINPNI 1282
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 NGIKPNV 8
+GI PN+
Sbjct: 1276 HGINPNI 1282
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 NGIKPNV 8
+GI PN+
Sbjct: 1276 HGINPNI 1282
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 NGIKPNV 8
+GI PN+
Sbjct: 1276 HGINPNI 1282
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 NGIKPNV 8
+GI PN+
Sbjct: 1276 HGINPNI 1282
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 NNGIKPNV 8
NN + PN+
Sbjct: 2135 NNALFPNI 2142
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 899 NGITPDV 905
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 NNGIKPN 7
+NG+KP+
Sbjct: 468 SNGLKPD 474
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 NNGIKPN 7
+NG+KP+
Sbjct: 468 SNGLKPD 474
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 NGIKPNV 8
NGI P+V
Sbjct: 907 NGITPDV 913
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 NNGIKPN 7
NN I PN
Sbjct: 273 NNNILPN 279
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 1 NNGIKPNVDL 10
+NG KP D+
Sbjct: 384 DNGGKPTPDM 393
162|Sequence|806|815|PNVDLYFGDA
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 NVDLYFGD 9
+VD+ FGD
Sbjct: 1838 DVDIQFGD 1845
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 NVDLYFGD 9
+VD+ FGD
Sbjct: 507 DVDIQFGD 514
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 329 PNIEKYF 335
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PNVDLYFGD 9
PN +LY D
Sbjct: 1779 PNYNLYIMD 1787
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 PNVDLYFGD 9
PN +LY D
Sbjct: 1779 PNYNLYIMD 1787
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PNVDLYFGD 9
PN +LY D
Sbjct: 1769 PNYNLYIMD 1777
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 PNVDLYFGD 9
PN +LY D
Sbjct: 1780 PNYNLYIMD 1788
>sp|VEMP_CVHN1|ENVELOPE small membrane protein|Human coronavirus HKU1 (isolate N1)
Query: 3 VDLYFGD 9
VDL+F D
Sbjct: 2 VDLFFND 8
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1122 NRELYIGD 1129
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1133 NRELYIGD 1140
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1130 NRELYIGD 1137
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NVDLYFGD 9
+VD+YF D
Sbjct: 127 SVDVYFQD 134
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 2 NVDLYFGD 9
+VD+YF D
Sbjct: 127 SVDVYFQD 134
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NVDLYFGD 9
+VD+YF D
Sbjct: 127 SVDVYFQD 134
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NVDLYFGD 9
+VD+YF D
Sbjct: 127 SVDVYFQD 134
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 PNVDLYFGDA 10
P+V YF A
Sbjct: 2525 PDVQFYFNAA 2534
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1131 NRELYVGD 1138
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1128 NRELYVGD 1135
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1127 NRELYVGD 1134
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1117 NRELYVGD 1124
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 NVDLYFGD 9
N +LY GD
Sbjct: 1127 NRELYVGD 1134
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PNVDLYFGDA 10
P+V YF A
Sbjct: 2552 PDVQFYFNAA 2561
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 PNVDLYFGDA 10
P+V YF A
Sbjct: 2530 PDVQFYFNAA 2539
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 PNVDLYF 7
PN++ YF
Sbjct: 334 PNIEKYF 340
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PNVDLYFG 8
PN +Y G
Sbjct: 1527 PNFSIYIG 1534
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PNVDLYFG 8
PN +Y G
Sbjct: 1527 PNFSIYIG 1534
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 PNVDLYF 7
P+V LYF
Sbjct: 294 PDVSLYF 300
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 3 VDLYF 7
VDLYF
Sbjct: 969 VDLYF 973
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 2 NVDLYF 7
NV+LYF
Sbjct: 192 NVELYF 197
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 NVDLYF 7
N+D YF
Sbjct: 1098 NIDYYF 1103
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 NVDLYF 7
N+D YF
Sbjct: 1098 NIDYYF 1103
163|Sequence|811|820|YFGDALKETN
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FGDALKETN 10
FGDA+ ET+
Sbjct: 2249 FGDAVLETD 2257
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FGDALKETN 10
FGDA+ ET+
Sbjct: 2229 FGDAVLETD 2237
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FGDALKETN 10
FGDA+ ET+
Sbjct: 2226 FGDAVLETD 2234
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 3 GDALKETN 10
GDALK+ N
Sbjct: 140 GDALKKNN 147
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 FGDALKETN 10
FG KETN
Sbjct: 380 FGSTDKETN 388
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 2 FGDALKETN 10
FG KETN
Sbjct: 380 FGSTDKETN 388
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 FGDALKET 9
+GDA++ET
Sbjct: 1025 WGDAVEET 1032
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 YFGDALKETN 10
Y+G +KE N
Sbjct: 212 YYGLGVKEQN 221
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 1 YFGDALKETN 10
YF D+L TN
Sbjct: 414 YFNDSLLITN 423
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YFGDALKETN 10
YF D+L TN
Sbjct: 414 YFNDSLLITN 423
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 YFGDALKETN 10
Y+G +KE N
Sbjct: 212 YYGLGVKEQN 221
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 YFGDALKETN 10
Y+G +KE N
Sbjct: 212 YYGLGVKEQN 221
164|Sequence|816|825|LKETNNNHSH
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 1 LKETNNNH 8
L + NNNH
Sbjct: 151 LNDKNNNH 158
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 ETNNNHSH 10
ET+ +H+H
Sbjct: 1981 ETDEDHAH 1988
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 ETNNNHSH 10
ET+ +H+H
Sbjct: 1981 ETDEDHAH 1988
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 ETNNNHS 9
ETNN H+
Sbjct: 723 ETNNGHA 729
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 ETNNNHS 9
ETNN H+
Sbjct: 723 ETNNGHA 729
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 5 NNNHSH 10
NN HSH
Sbjct: 104 NNTHSH 109
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 ETNNNHSH 10
ET+ H+H
Sbjct: 1977 ETDEGHAH 1984
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 NNNHSH 10
N NH+H
Sbjct: 1299 NGNHTH 1304
>sp|SCP_HHV11|SMALL capsomere-interacting protein|Human herpesvirus 1 (strain 17)
Query: 5 NNNHSH 10
+NNH H
Sbjct: 37 DNNHPH 42
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 KETNNN 7
KET NN
Sbjct: 191 KETGNN 196
165|Sequence|821|830|NNHSHQTMEL
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 NHSHQTME 9
NH H+TM+
Sbjct: 469 NHQHRTMQ 476
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NHSHQTM 8
NH H TM
Sbjct: 2265 NHHHATM 2271
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 NHSHQTME 9
NH H TM+
Sbjct: 469 NHQHGTMQ 476
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 NHSHQTME 9
NH H TM+
Sbjct: 469 NHQHGTMQ 476
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 NHSHQTME 9
NH H TM+
Sbjct: 469 NHQHGTMQ 476
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 NHSHQTME 9
NH H TM+
Sbjct: 469 NHQHGTMQ 476
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NNHSHQTM 8
NN SH+T+
Sbjct: 451 NNSSHETI 458
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 NNHSHQTME 9
NN+ H TM+
Sbjct: 468 NNNQHGTMQ 476
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 5 HQTMEL 10
HQTM+L
Sbjct: 1271 HQTMQL 1276
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 NHSHQTME 9
NH H TM+
Sbjct: 458 NHQHGTMQ 465
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 3 HSHQTMEL 10
HS +T+EL
Sbjct: 335 HSSETIEL 342
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 1 NNHSHQTMEL 10
N +QTMEL
Sbjct: 173 NTEINQTMEL 182
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 NHSHQTMEL 10
+HSHQ + +
Sbjct: 1851 HHSHQDLHI 1859
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 NHSHQTMEL 10
+HSHQ + +
Sbjct: 1851 HHSHQDLHI 1859
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 NNHSHQTME 9
N+H H T++
Sbjct: 468 NDHQHGTLQ 476
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NNHSHQTMEL 10
N +QTMEL
Sbjct: 173 NTEINQTMEL 182
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 NHSHQTM 8
NH H T+
Sbjct: 2266 NHQHATI 2272
>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate
Query: 2 NHSHQTM 8
NH HQ M
Sbjct: 77 NHDHQVM 83
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 NHSHQTME 9
NH H T++
Sbjct: 469 NHQHGTLQ 476
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 NNHSHQTME 9
++H H TM+
Sbjct: 468 HDHQHGTMQ 476
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 NNHSHQT 7
NN+SH++
Sbjct: 451 NNYSHRS 457
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 NNHSHQTME 9
++H H TM+
Sbjct: 468 HDHQHGTMQ 476
>sp|NSP6_ROTH7|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 2 NHSHQTM 8
NH HQ M
Sbjct: 77 NHDHQAM 83
166|Sequence|826|838|QTMELKVAIQTEI
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 QTMELKVAIQT 11
QTM +V++QT
Sbjct: 545 QTMTAEVSLQT 555
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 QTMELKVAIQT 11
Q +EL +A+Q+
Sbjct: 71 QAIELHIALQS 81
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 QTMELKVAIQTEI 13
QT+++++ +QT +
Sbjct: 220 QTVDIQIPVQTAL 232