RN19A_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SIFGIEQEQM

>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SIFGIEQEQM 10
S++GI+QE M
Sbjct: 307 SMYGIDQEVM 316


>sp|SPSS_METJA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SIFGIEQEQM 10
S++G+E EQ+
Sbjct: 353 SVYGLEWEQV 362


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SIFGIEQEQM 10
SI+G+ +EQ+
Sbjct: 353 SIYGMTEEQV 362


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 SIFGIEQEQM 10
+I+G+ +E+M
Sbjct: 107 AIYGVPEEEM 116


>sp|PYRE_METHJ|OROTATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 SIFGIEQ 7
++FGIEQ
Sbjct: 122 AVFGIEQ 128


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IFGIEQEQM 10
+FG++ EQ+
Sbjct: 749 VFGVDAEQL 757


>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IFGIEQEQM 10
+FG+E+E +
Sbjct: 211 LFGVEEEAL 219


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FGIEQEQ 9
+GIE+EQ
Sbjct: 400 YGIEEEQ 406


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 3 FGIEQEQM 10
+GIE EQ+
Sbjct: 400 YGIEDEQL 407




2|SequenceR|15|6|GENYKSIFGI

>sp|Y1056_PYRAR|UPF0282 protein Pars_1056|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GENYKSIFG 9
GE YK ++G
Sbjct: 92 GETYKKVYG 100


>sp|Y3680_PYRAE|UPF0282 protein PAE3680|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GENYKSIFG 9
GE Y+ I+G
Sbjct: 92 GETYRQIYG 100


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ENYKSIFGI 10
E YK I+G+
Sbjct: 103 EEYKEIYGV 111


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 3 NYKSIFGI 10
NYK++FG+
Sbjct: 168 NYKALFGL 175


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ENYKSIFGI 10
E YK IFGI
Sbjct: 17 EGYKRIFGI 25


>sp|Y934_PYRNV|UPF0282 protein Tneu_0934|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GENYKSIFG 9
GE YK ++G
Sbjct: 92 GEMYKRVYG 100


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 GENYKSIFGI 10
G N +IFGI
Sbjct: 242 GANLNAIFGI 251


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 GENYKSIFG 9
ENY+ I+G
Sbjct: 1065 AENYEQIYG 1073


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 GENYKSIFG 9
G ++KS+FG
Sbjct: 754 GHSHKSMFG 762


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GENYKSIFG 9
GE YK+ FG
Sbjct: 106 GEVYKAPFG 114


>sp|MCRZ_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 GENYKSI 7
GE+YKS+
Sbjct: 49 GESYKSV 55


>sp|MCRZ_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 GENYKSI 7
GE+YKS+
Sbjct: 49 GESYKSV 55


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ENYKSIFG 9
E+YKSI G
Sbjct: 16 EDYKSIIG 23


>sp|SYT_PYRNV|THREONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GENYKSIFG 9
GE YK+ FG
Sbjct: 106 GEVYKAPFG 114


>sp|RNH2_METM7|RIBONUCLEASE HII|Methanococcus maripaludis (strain C7 /

Query: 2 ENYKSIFG 9
E YK IFG
Sbjct: 178 EEYKEIFG 185


>sp|Y1546_PYRCJ|UPF0282 protein Pcal_1546|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ENYKSIFG 9
E YK+++G
Sbjct: 93 ETYKAVYG 100


>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 1 GENYKSIFG 9
GE YK FG
Sbjct: 258 GETYKMKFG 266


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 GENYKSIFGI 10
GE YKS + I
Sbjct: 306 GERYKSFYFI 315


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 ENYKSIFG 9
ENYK FG
Sbjct: 14 ENYKYFFG 21


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GENYKSIFG 9
GE YK+ FG
Sbjct: 106 GEVYKAPFG 114


>sp|Y280_METSM|UPF0280 protein ORFE|Methanobrevibacter smithii

Query: 1 GENYKSIF 8
ENYK +F
Sbjct: 200 SENYKDLF 207


>sp|Y088_METS3|UPF0280 protein Msm_0088|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GENYKSIF 8
ENYK +F
Sbjct: 201 SENYKDLF 208


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 GENYKSIFGI 10
G N +IFGI
Sbjct: 242 GANLNAIFGI 251


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 GENYKSIFG 9
ENYK +F
Sbjct: 156 NENYKELFS 164


>sp|NSUN6_PYRHO|TRNA (cytosine(72)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 2 ENYKSIFG 9
E YK++FG
Sbjct: 15 EYYKNLFG 22




3|SequenceR|20|11|TNVCLGENYK

>sp|TRPF_METM6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C6 /

Query: 2 NVCLGENYK 10
NV LGENY+
Sbjct: 202 NVKLGENYE 210


>sp|TRPF_METMP|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 2 NVCLGENYK 10
NV LGENY+
Sbjct: 202 NVKLGENYE 210


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 3 VCLGENYK 10
+C G+NYK
Sbjct: 601 LCHGDNYK 608


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TNVCLGENYK 10
TN+ +G+ YK
Sbjct: 134 TNLIIGDGYK 143


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 VCLGENYK 10
VC+GE+++
Sbjct: 334 VCIGEDWE 341


>sp|MTRC_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter marburgensis

Query: 2 NVCLGEN 8
N CLG N
Sbjct: 188 NACLGPN 194


>sp|MTRC_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter

Query: 2 NVCLGEN 8
N CLG N
Sbjct: 188 NACLGPN 194


>sp|MTRC_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanocaldococcus jannaschii (strain

Query: 2 NVCLGEN 8
N CLG N
Sbjct: 192 NACLGPN 198


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 1 TNVCLG 6
TN+C+G
Sbjct: 56 TNICVG 61


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 1 TNVCLGE 7
TN+C+G+
Sbjct: 59 TNICVGD 65




4|SequenceR|25|16|ISVPDTNVCL

>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 SVPDTNVCL 10
+VP NVCL
Sbjct: 163 TVPAPNVCL 171


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 4 PDTNVC 9
P+TNVC
Sbjct: 39 PNTNVC 44


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 4 PDTNVC 9
P+TNVC
Sbjct: 38 PNTNVC 43


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 4 PDTNVC 9
P+TNVC
Sbjct: 32 PNTNVC 37


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ISVPDTNV 8
I VPD NV
Sbjct: 388 IDVPDANV 395


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 30 PNTNIC 35


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 36 PNTNIC 41


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 36 PNTNIC 41


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 36 PNTNIC 41


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 ISVPDTNVC 9
I +P+TN+C
Sbjct: 173 IELPETNLC 181


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 36 PNTNIC 41


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 36 PNTNIC 41


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 4 PDTNVC 9
P+TN+C
Sbjct: 36 PNTNIC 41


>sp|AATD_METS3|A-TYPE ATP synthase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 1 ISVPDTNV 8
+SVP TNV
Sbjct: 104 VSVPVTNV 111


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 4 PDTNVCL 10
P+T +CL
Sbjct: 38 PETKICL 44


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 1 ISVPDTNVC 9
I +P TN+C
Sbjct: 173 IELPSTNLC 181


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 ISVPDTNVC 9
+ VPD VC
Sbjct: 291 VDVPDGQVC 299


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 ISVPDTN 7
+ +PDTN
Sbjct: 76 VDIPDTN 82


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 ISVPDTN 7
+ +PDTN
Sbjct: 76 VDIPDTN 82




5|SequenceR|30|21|LISTLISVPD

>sp|PDXS_SULAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Sulfolobus acidocaldarius

Query: 2 ISTLISVPD 10
ISTLIS+P+
Sbjct: 211 ISTLISLPE 219


>sp|Y864_ARCFU|UNCHARACTERIZED protein AF_0864|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LISTLISVP 9
LIS+L+S+P
Sbjct: 91 LISSLLSLP 99


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ISTLISVP 9
+STLI++P
Sbjct: 145 LSTLITIP 152


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 2 ISTLISVPD 10
+ST++ VPD
Sbjct: 162 VSTMLKVPD 170


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LISTLISVPD 10
L++ LIS PD
Sbjct: 96 LMADLISAPD 105




6|SequenceR|35|26|HLSMDLISTL

>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 HLSMDLIS 8
HL MD++S
Sbjct: 344 HLDMDILS 351


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HLSMDLISTL 10
H+S +LIS L
Sbjct: 94 HISCELISAL 103




7|SequenceR|40|31|SGMQRHLSMD

>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SGMQRHLSM 9
SGM RH+S+
Sbjct: 42 SGMTRHISV 50


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 1 SGMQRHLS 8
SGM+RH+S
Sbjct: 49 SGMRRHIS 56


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 SGMQRHLSMD 10
SG++RH D
Sbjct: 135 SGLERHAPFD 144


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GMQRHLSMD 10
GM++H+ +D
Sbjct: 50 GMKQHIPLD 58


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 1 SGMQRHLSM 9
SGM H+S+
Sbjct: 253 SGMHTHISL 261


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 1 SGMQRHLSM 9
SGM H+S+
Sbjct: 253 SGMHTHISL 261


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 SGMQRHLSM 9
SGM H+S+
Sbjct: 251 SGMHSHISL 259


>sp|RS15_NITMS|SMALL ribosomal subunit protein uS15|Nitrosopumilus maritimus (strain

Query: 2 GMQRHL 7
G+QRHL
Sbjct: 97 GLQRHL 102




8|SequenceR|45|36|QLDRDSGMQR

>sp|Y1008_ARCFU|UNCHARACTERIZED protein AF_1008|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLDRDSGMQR 10
Q+ RD G+QR
Sbjct: 55 QIRRDHGIQR 64




9|SequenceR|50|41|SSASSQLDRD

***** No hits found ******


10|SequenceR|55|46|SPLSVSSASS

***** No hits found ******


11|SequenceR|60|51|PAKKVSPLSV

>sp|Y1062_PYRAB|UNCHARACTERIZED protein PYRAB10620|Pyrococcus abyssi (strain GE5 /

Query: 2 AKKVSPLSV 10
AKK+SP+ V
Sbjct: 196 AKKISPVPV 204


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 PAKKVSPLS 9
PAK +PLS
Sbjct: 244 PAKTYTPLS 252




12|SequenceR|65|56|IRRKKPAKKV

>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 1 IRRKKPAKKV 10
+ R+KPA+KV
Sbjct: 387 VSREKPAEKV 396


>sp|RL34_METTH|LARGE ribosomal subunit protein eL34|Methanothermobacter

Query: 1 IRRKKPAKKV 10
RRKKP+K V
Sbjct: 27 YRRKKPSKHV 36




13|SequenceR|70|61|LSGISIRRKK

>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSGISIRRKK 10
+SG+S RR+K
Sbjct: 110 ISGLSARRRK 119




14|SequenceR|75|66|KKRRFLSGIS

>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 3 RRFLSGIS 10
+RFLSGIS
Sbjct: 7 QRFLSGIS 14


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 1 KKRRFLSGIS 10
KKR F GIS
Sbjct: 74 KKRGFALGIS 83


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 1 KKRRFLSGI 9
KKR LSG+
Sbjct: 343 KKRELLSGL 351




15|SequenceR|80|71|KRKNDKKRRF

>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KRKNDKKRR 9
K K+D+KRR
Sbjct: 213 KEKDDEKRR 221




16|SequenceR|85|76|NLERSKRKND

>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 1 NLERSKRKND 10
NLE KRK D
Sbjct: 423 NLESMKRKED 432




17|SequenceR|90|81|GDVGGNLERS

>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GDVGGNLER 9
GDV GN+ R
Sbjct: 154 GDVLGNINR 162


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GDVGGNLER 9
GD+G NL+R
Sbjct: 220 GDLGCNLDR 228


>sp|ARLY_METHJ|ARGININOSUCCINATE lyase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GDVGGNL 7
GDVGG L
Sbjct: 99 GDVGGRL 105


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 GDVGGNLER 9
GDV G+L++
Sbjct: 310 GDVAGHLDK 318


>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC

Query: 1 GDVGGNLER 9
G V GNL+R
Sbjct: 54 GIVAGNLQR 62




18|SequenceR|95|86|EISAIGDVGG

>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ISAIGDVGG 10
+ IGDVGG
Sbjct: 300 VKEIGDVGG 308


>sp|Y1582_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ1582|Methanocaldococcus jannaschii

Query: 1 EISAIGDVG 9
EI AIG++G
Sbjct: 89 EILAIGEIG 97


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 ISAIGDVGG 10
++A+GD GG
Sbjct: 468 VTALGDAGG 476


>sp|PYRE_PYRAR|OROTATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ISAIGDVGG 10
ISA+G+ GG
Sbjct: 124 ISAVGEAGG 132




19|SequenceR|100|91|ESHISEISAI

***** No hits found ******


20|SequenceR|105|96|KDTCMESHIS

>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KDTCMESHI 9
KD CM HI
Sbjct: 227 KDLCMIEHI 235


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 KDTCM 5
KDTCM
Sbjct: 355 KDTCM 359




21|SequenceR|110|101|SFISNKDTCM

>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SFISNKDTC 9
SFI KD C
Sbjct: 225 SFIEKKDYC 233


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FISNKDTC 9
++++KDTC
Sbjct: 192 YVTSKDTC 199


>sp|PYRH_METS3|URIDYLATE kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 FISNKDT 8
FIS KDT
Sbjct: 169 FISGKDT 175


>sp|MOAC_METBU|PROBABLE cyclic pyranopterin monophosphate synthase|Methanococcoides

Query: 3 ISNKDT 8
ISNKDT
Sbjct: 17 ISNKDT 22




22|SequenceR|115|106|SSTNTSFISN

>sp|Y584_THEVO|PROTEIN TV0584|Thermoplasma volcanium (strain ATCC 51530

Query: 2 STNTSFISN 10
+TN SFI N
Sbjct: 20 NTNASFIGN 28


>sp|PAN_METKA|PROTEASOME-ACTIVATING nucleotidase|Methanopyrus kandleri (strain AV19 /

Query: 1 SSTNTSFISN 10
SST F+SN
Sbjct: 119 SSTGPKFVSN 128




23|SequenceR|120|111|TLGNDSSTNT

***** No hits found ******


24|SequenceR|125|116|QKSISTLGND

>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 QKSISTLGN 9
Q+ ISTLG+
Sbjct: 116 QRRISTLGS 124


>sp|PURP_CENSY|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Cenarchaeum symbiosum (strain A)

Query: 2 KSISTLGN 9
KS+STLG+
Sbjct: 2 KSVSTLGS 9




25|SequenceR|130|121|IFDGIQKSIS

>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 IFDGIQKSI 9
IFDGIQ+ +
Sbjct: 86 IFDGIQRPL 94


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 IFDGIQKSI 9
IFDGIQ+ +
Sbjct: 84 IFDGIQRPL 92


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 IFDGIQKSI 9
IFDGIQ+ +
Sbjct: 84 IFDGIQRPL 92


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 84 IFDGLQRPL 92


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 IFDGIQKSI 9
IFDG+Q+ +
Sbjct: 83 IFDGLQRPL 91


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 81 IYDGIQRPL 89


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 86 IYDGIQRPL 94


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 84 IYDGIQRPL 92


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 89 IYDGIQRPL 97


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 86 IYDGIQRPL 94


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 92 IYDGIQRPL 100


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 84 IYDGIQRPL 92


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 IFDGIQKSI 9
+FDG+Q+ +
Sbjct: 86 VFDGVQRPL 94


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 83 IYDGIQRPL 91


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 86 IYDGIQRPL 94


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 84 IYDGIQRPL 92


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 84 IYDGIQRPL 92


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 IFDGIQKSIS 10
IFD IQK IS
Sbjct: 378 IFDRIQKIIS 387


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 84 IYDGIQRPL 92


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 83 IYDGIQRPL 91


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 2 FDGIQKSI 9
F+G++KSI
Sbjct: 366 FEGVEKSI 373


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IFDGIQKSI 9
+FDG+Q+ I
Sbjct: 172 MFDGLQRYI 180


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 83 IYDGIQRPL 91


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 81 IYDGIQRPL 89


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IFDGIQKSI 9
I+DGIQ+ +
Sbjct: 81 IYDGIQRPL 89


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 81 IYDGVQRPL 89


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 81 IYDGVQRPL 89


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 81 IYDGVQRPL 89


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 81 IYDGVQRPL 89


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 81 IYDGVQRPL 89


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 91 IYDGVQRPL 99


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 82 IYDGVQRPL 90


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 83 IYDGVQRPL 91


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 90 IYDGVQRPL 98


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 91 IYDGVQRPL 99


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 89 IYDGVQRPL 97


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 89 IYDGVQRPL 97


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 91 IYDGVQRPL 99


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 88 IYDGVQRPL 96


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 84 IYDGVQRPL 92


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 83 IYDGVQRPL 91


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 83 IYDGVQRPL 91


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 83 IYDGVQRPL 91


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 IFDGIQKSI 9
I+DG+Q+ +
Sbjct: 83 IYDGVQRPL 91


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126


>sp|METK_PYRAB|S-ADENOSYLMETHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 IFDGIQKSIS 10
I DGI +SIS
Sbjct: 34 IADGIAESIS 43


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IFDGIQKSIS 10
I DGI +SIS
Sbjct: 34 IADGIAESIS 43


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 3 DGIQKSIS 10
DGI+K++S
Sbjct: 119 DGIEKALS 126




26|SequenceR|135|126|CLPCEIFDGI

>sp|DIPPS_ARCFU|BIFUNCTIONAL IPC transferase and DIPP|Archaeoglobus fulgidus (strain ATCC

Query: 2 LPCEIFDGI 10
LPCE F+G+
Sbjct: 3 LPCESFNGV 11


>sp|FTRL_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Archaeoglobus fulgidus (strain

Query: 4 CEIFDGI 10
CE FDGI
Sbjct: 14 CEAFDGI 20


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 2 LPCEIFDG 9
+PCEI+ G
Sbjct: 128 MPCEIYMG 135


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPCEIFDG 9
+PCEI+ G
Sbjct: 136 MPCEIYMG 143


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPCEIFDG 9
+PCEI+ G
Sbjct: 136 MPCEIYMG 143


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 1 CLPCEIFD 8
C+PC I D
Sbjct: 170 CMPCRIND 177


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 3 PCEIFDGI 10
PCE DG+
Sbjct: 18 PCEALDGL 25


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 2 LPCEIFDGI 10
L CEIF G+
Sbjct: 465 LECEIFVGV 473


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LPCEIFDGI 10
LP E+FD I
Sbjct: 284 LPLEVFDEI 292


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 2 LPCEIFDGI 10
+PC + DGI
Sbjct: 560 VPCILLDGI 568


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPCEIFDGI 10
+PC + DGI
Sbjct: 560 VPCILLDGI 568


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPCEIFDGI 10
+PC + DGI
Sbjct: 560 VPCILLDGI 568


>sp|SPEE_ARCFU|POLYAMINE aminopropyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CEIFDGI 10
CEIFD I
Sbjct: 141 CEIFDVI 147


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPCEIFDG 9
L CE+ DG
Sbjct: 254 LHCEVLDG 261


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 PCEIF 7
PCE+F
Sbjct: 390 PCEVF 394


>sp|NCPP_METAR|PROBABLE inosine/xanthosine triphosphatase|Methanocella arvoryzae (strain

Query: 4 CEIFDGI 10
C +FDG+
Sbjct: 87 CAVFDGL 93


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 3 PCEIFDGI 10
P E++DG+
Sbjct: 208 PGEVYDGV 215


>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CEIFDG 9
C IFDG
Sbjct: 72 CAIFDG 77


>sp|CSM4_THEON|CRISPR system Cms protein Csm4|Thermococcus onnurineus (strain NA1)

Query: 3 PCEIFDG 9
P E+FDG
Sbjct: 164 PREVFDG 170


>sp|NIKR_METBU|PUTATIVE nickel-responsive regulator|Methanococcoides burtonii (strain DSM

Query: 1 CLPCEIFDG 9
CL IFDG
Sbjct: 100 CLEVIIFDG 108


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CLPCEIFDG 9
CL C F G
Sbjct: 223 CLACHAFSG 231




27|SequenceR|140|131|SHRLLCLPCE

>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 SHRLLCLP 8
SHR++ LP
Sbjct: 431 SHRIIILP 438


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RLLCLPC 9
RL+ LPC
Sbjct: 328 RLIILPC 334




28|SequenceR|145|136|PFRDKSHRLL

>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FRDKSHRLL 10
+ DK HR L
Sbjct: 302 YSDKKHRFL 310


>sp|PURP_METTP|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothrix thermoacetophila (strain

Query: 1 PFRDKSHRL 9
P R+K +RL
Sbjct: 203 PIREKGYRL 211


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 FRDKSH 7
FRDK+H
Sbjct: 389 FRDKTH 394


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FRDKSH 7
FRDK+H
Sbjct: 389 FRDKTH 394




29|SequenceR|150|141|CTMIDPFRDK

>sp|Y1705_METHJ|UPF0173 metal-dependent hydrolase Mhun_1705|Methanospirillum hungatei

Query: 1 CTMIDPF 7
C +IDPF
Sbjct: 18 CVLIDPF 24


>sp|NIFH_METVO|NITROGENASE iron protein|Methanococcus voltae

Query: 2 TMIDPFRDK 10
T++D FRDK
Sbjct: 54 TVLDTFRDK 62


>sp|MTQ2_HALVD|RELEASE factor glutamine methyltransferase Mtq2|Haloferax volcanii

Query: 2 TMIDPFRD 9
++++PFRD
Sbjct: 92 SLVEPFRD 99


>sp|Y772_ARCFU|UNCHARACTERIZED protein AF_0772|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TMIDPFRDK 10
T++ PFRD+
Sbjct: 95 TLLRPFRDE 103


>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 4 IDPFRDK 10
+ PFRDK
Sbjct: 270 VAPFRDK 276


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MIDPFRDK 10
M+DPF +K
Sbjct: 1 MLDPFSEK 8


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 3 MIDPFRDK 10
M+DPF +K
Sbjct: 1 MLDPFSEK 8


>sp|NADM_ARCFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CTMIDPF 7
C+M+ PF
Sbjct: 92 CSMVPPF 98


>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 2 TMIDPF 7
T+IDPF
Sbjct: 22 TLIDPF 27


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 TMIDPFRD 9
T++DP RD
Sbjct: 760 TVVDPTRD 767


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CTMIDP 6
CT++DP
Sbjct: 43 CTVVDP 48


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 3 MIDPFRDK 10
M+DPF +K
Sbjct: 1 MLDPFSEK 8


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 TMIDPFRDK 10
T++ PF DK
Sbjct: 182 TILAPFNDK 190




30|SequenceR|155|146|CSRHHCTMID

>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RHHCTMID 10
+HHC M++
Sbjct: 134 KHHCEMLN 141


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CSRHHCTMI 9
C+R H TM+
Sbjct: 36 CNRAHTTML 44


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 SRHHCTMID 10
SRH T+ID
Sbjct: 256 SRHTSTLID 264


>sp|RFHPS_METTH|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Methanothermobacter thermautotrophicus

Query: 2 SRHHCTMID 10
SR H T+ID
Sbjct: 11 SRLHLTLID 19


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 SRHHCTMID 10
S+HH +ID
Sbjct: 727 SQHHPVLID 735


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SRHHCTMID 10
SR H T+ID
Sbjct: 8 SRIHITLID 16


>sp|THIE_METHJ|THIAMINE-PHOSPHATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CSRHHCTMI 9
C++HH I
Sbjct: 57 CTQHHARFI 65


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 4 HHCTMID 10
H+C +ID
Sbjct: 235 HYCVVID 241


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 4 HHCTMID 10
H+C +ID
Sbjct: 235 HYCVVID 241




31|SequenceR|160|151|RLCDVCSRHH

>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 154 CEVCGRH 160


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 156 CEVCGRH 162


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 154 CEVCGRH 160


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 154 CEVCGRH 160


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 154 CEVCGRH 160


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 154 CEVCGRH 160


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CDVCSRH 9
C+VC RH
Sbjct: 156 CEVCGRH 162


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 2 LCDVCSRH 9
+CDVC+R+
Sbjct: 198 VCDVCARN 205


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLCDVCSRHH 10
R+C +CS H
Sbjct: 66 RMCGICSFSH 75


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LCDVCSRHH 10
+C VC+++H
Sbjct: 467 VCPVCNKYH 475


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 RLCDVCSR 8
R CDVC +
Sbjct: 1031 RKCDVCKK 1038


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 RLCDVCSRH 9
R C VC R+
Sbjct: 31 RACSVCGRY 39


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RLCDVCSRHH 10
R+C CS H
Sbjct: 63 RICSFCSAAH 72


>sp|Y328_METJA|UNCHARACTERIZED protein MJ0328|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCDVCSRHH 10
+LC VC+ H
Sbjct: 8 KLCKVCNSPH 17


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 2 LCDVCSR 8
LC+VC R
Sbjct: 180 LCEVCPR 186


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 LCDVCSR 8
LC+VC R
Sbjct: 180 LCEVCPR 186


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 59 RICGICQVQH 68


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 1 RLCDVCSRH 9
RLCD RH
Sbjct: 250 RLCDKILRH 258


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 3 CDVCSRHH 10
C++ S HH
Sbjct: 122 CEIVSEHH 129


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 59 RICGICDVQH 68


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 59 RICGICDVQH 68


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RLCDVCSRHH 10
R C VCS H
Sbjct: 194 RACGVCSSCH 203


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 3 CDVCSRH 9
C VCSR+
Sbjct: 277 CPVCSRY 283


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CDVCSRH 9
C VCSR+
Sbjct: 277 CPVCSRY 283


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 3 CDVCSRH 9
C VCSR+
Sbjct: 281 CPVCSRY 287


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CDVCSRH 9
C VCSR+
Sbjct: 278 CPVCSRY 284


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CDVCSRH 9
C VCSR+
Sbjct: 274 CPVCSRY 280


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CDVCSRH 9
C VCS H
Sbjct: 275 CPVCSNH 281


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain

Query: 1 RLCDVCSRHH 10
R+C VC H
Sbjct: 59 RICGVCPLSH 68


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain

Query: 1 RLCDVCSRHH 10
R+C VC H
Sbjct: 59 RICGVCPLSH 68


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 2 LCDVCS 7
LC+VCS
Sbjct: 118 LCEVCS 123


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 CDVCSRH 9
C VCS H
Sbjct: 280 CPVCSSH 286


>sp|VHUA_METVO|F420-NON-REDUCING hydrogenase vhu subunit A|Methanococcus voltae

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 59 RICGICQTAH 68


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 59 RICGICQTAH 68


>sp|RL30E_METKA|LARGE ribosomal subunit protein eL30|Methanopyrus kandleri (strain AV19

Query: 2 LCDVCSRHH 10
L DVC R H
Sbjct: 71 LGDVCGRPH 79


>sp|FRHA_METJA|COENZYME F420 hydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 66 RICGICQTTH 75


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 RLCDVCS 7
R+CD C+
Sbjct: 453 RICDYCA 459


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 RLCDVCSRHH 10
R+C +C H
Sbjct: 59 RICGICQVSH 68


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LCDVC 6
LCD+C
Sbjct: 75 LCDIC 79


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CDVCSRH 9
C +CSR+
Sbjct: 277 CPICSRY 283


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LCDVC 6
LCD+C
Sbjct: 143 LCDIC 147


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RLCDVC----SRHH 10
++CD+C RH+
Sbjct: 171 KVCDICGHEVKRHY 184


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RLCDVCSR 8
R C VC R
Sbjct: 20 RTCPVCGR 27


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 RLCDVCSR 8
R C VC R
Sbjct: 435 RTCPVCGR 442


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDVCSRH 9
C +C RH
Sbjct: 17 CHICPRH 23


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCDVC 6
R+C+VC
Sbjct: 29 RVCEVC 34


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLCDVCS 7
R+C+ CS
Sbjct: 308 RVCEACS 314


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCDVCSRHH 10
R+C +CS H
Sbjct: 64 RVCGICSYVH 73


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCDVCSRHH 10
++C +CS H
Sbjct: 66 KICGICSHIH 75


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19

Query: 1 RLCDVC 6
++CD+C
Sbjct: 10 KVCDIC 15


>sp|HMD_METTW|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain Winter)

Query: 2 LCDVCS 7
+CD+CS
Sbjct: 251 VCDMCS 256


>sp|HMD_METTM|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 LCDVCS 7
+CD+CS
Sbjct: 251 VCDMCS 256


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LCDVCS 7
+CD+CS
Sbjct: 251 VCDMCS 256


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 2 LCDVCS 7
+CD+CS
Sbjct: 251 VCDMCS 256


>sp|HMD_METJA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LCDVCS 7
+CD+CS
Sbjct: 249 VCDMCS 254


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 1 RLCDVCSRHH 10
R+C VC H
Sbjct: 61 RICGVCPIPH 70


>sp|KAD_THEGJ|ADENYLATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LCDVC 6
+CDVC
Sbjct: 147 ICDVC 151


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LCDVC 6
+CDVC
Sbjct: 147 ICDVC 151


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 2 LCDVCSR 8
+C+VC R
Sbjct: 176 MCEVCPR 182


>sp|Y1243_METJA|UPF0251 protein MJ1243|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLCDVCSRH 9
R C C RH
Sbjct: 100 RECGFCMRH 108




32|SequenceR|165|156|IRLYQRLCDV

>sp|RPO1C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanothermobacter

Query: 1 IRLYQRLCD 9
+RL+ R+C+
Sbjct: 45 VRLFSRICE 53


>sp|CCA_METJA|CCA-ADDING enzyme|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLYQRLCD 9
RL +RLCD
Sbjct: 154 RLNERLCD 161


>sp|ENO_META3|ENOLASE aeolicus (strain ATCC BAA-1280

Query: 1 IRLYQRLCD 9
I LY+ +CD
Sbjct: 270 ISLYKEICD 278


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IRLYQRLCD 9
+RL +R+CD
Sbjct: 279 VRLQKRVCD 287


>sp|AATB3_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RLYQRLCD 9
+LY R CD
Sbjct: 403 KLYIRFCD 410


>sp|CDC62_THEAC|ORC1-TYPE DNA replication protein 2|Thermoplasma acidophilum (strain ATCC

Query: 4 YQRLCD 9
Y+R+CD
Sbjct: 323 YRRICD 328


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LYQRLCDV 10
LY+RLC +
Sbjct: 259 LYERLCKI 266


>sp|CHER_HALS3|CHEMOTAXIS protein methyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 IRLYQRLCD 9
IR+Y R+ D
Sbjct: 259 IRIYSRVAD 267




33|SequenceR|170|161|SESIEIRLYQ

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 SESIEIRLY 9
S+ IEI+LY
Sbjct: 7131 SDDIEIQLY 7139


>sp|PSB_ARCPA|PROTEASOME subunit beta|Archaeoglobus profundus (strain DSM 5631

Query: 3 SIEIRLYQ 10
S+EI+LY+
Sbjct: 72 SVEIKLYE 79




34|SequenceR|175|166|SINVRSESIE

***** No hits found ******


35|SequenceR|180|171|TCEPCSINVR

>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CEPCSINVR 10
C+PC + R
Sbjct: 216 CQPCGLGAR 224


>sp|GCST_HALSA|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CEPCSINVR 10
C+PC + R
Sbjct: 221 CQPCGLGAR 229


>sp|GCST_HALS3|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 CEPCSINVR 10
C+PC + R
Sbjct: 221 CQPCGLGAR 229


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CEPCSINVR 10
C+PC + R
Sbjct: 219 CQPCGLGAR 227


>sp|Y1412_METJA|UPF0288 protein MJ1412|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EPCSINV 9
EPCSI V
Sbjct: 433 EPCSIGV 439


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 2 CEPCSIN 8
C PC IN
Sbjct: 170 CMPCRIN 176


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 EPCSINV 9
+PC INV
Sbjct: 761 KPCEINV 767


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EPCSINV 9
EPC +N+
Sbjct: 354 EPCEVNL 360


>sp|COAD_METTH|PHOSPHOPANTETHEINE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 3 EPCSINVR 10
EPCS+ ++
Sbjct: 53 EPCSVRMK 60


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 2 CEPCSINV 9
C PCS V
Sbjct: 99 CPPCSAKV 106


>sp|RL10E_HALSA|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 4 PCSINV 9
PC INV
Sbjct: 162 PCKINV 167


>sp|RL10E_HALS3|LARGE ribosomal subunit protein uL16|Halobacterium salinarum (strain ATCC

Query: 4 PCSINV 9
PC INV
Sbjct: 162 PCKINV 167


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 TCEPCSINVR 10
TC C++ +R
Sbjct: 749 TCPKCNVKLR 758


>sp|RL11_METMA|LARGE ribosomal subunit protein uL11|Methanosarcina mazei (strain ATCC

Query: 1 TCEPCSINV 9
TC P +NV
Sbjct: 127 TCVPMGVNV 135


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CEPCSI 7
C+PC++
Sbjct: 151 CDPCAV 156




36|SequenceR|185|176|PNFRETCEPC

>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 PNFRETCEP 9
P FRE EP
Sbjct: 993 PEFRELTEP 1001


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 3 FRETCE 8
F+ETCE
Sbjct: 132 FKETCE 137


>sp|Y400_METKA|UPF0200 protein MK0400|Methanopyrus kandleri (strain AV19 /

Query: 1 PNFRETC 7
P FRE C
Sbjct: 164 PEFREKC 170


>sp|SYH_METS5|HISTIDINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 NFRETCE 8
NFRET E
Sbjct: 27 NFRETVE 33


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 PNFRETCEP 9
P FRE EP
Sbjct: 145 PEFREPFEP 153


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FRETCEPC 10
++ C+PC
Sbjct: 202 LKDNCQPC 209


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 FRETCEPC 10
++ C+PC
Sbjct: 201 LKDNCKPC 208


>sp|CFBA_METKA|SIROHYDROCHLORIN cobaltochelatase|Methanopyrus kandleri (strain AV19 /

Query: 3 FRETCEP 9
F E CEP
Sbjct: 40 FMELCEP 46


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 5 ETCEPC 10
E CEPC
Sbjct: 25 EECEPC 30




37|SequenceR|190|181|LRIDHPNFRE

>sp|COFC_HALTV|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 LRIDHPNFR 9
L +DHP FR
Sbjct: 141 LVVDHPEFR 149


>sp|AGLB2_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RIDHPNFRE 10
R+D+P FR+
Sbjct: 377 RVDYPVFRK 385


>sp|Y1751_AERPE|UPF0201 protein APE_1751|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRIDHPNFRE 10
+ I+HPN RE
Sbjct: 119 ITIEHPNVRE 128


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RIDHPNFR 9
+I+HP FR
Sbjct: 672 KIEHPKFR 679


>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IDHPNFR 9
IDHP F+
Sbjct: 116 IDHPAFK 122


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 3 IDHPNFRE 10
+D P FRE
Sbjct: 289 VDDPEFRE 296


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 3 IDHPNFR 9
+DHPN R
Sbjct: 47 LDHPNHR 53


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 LRIDHPNFR 9
LR D P+FR
Sbjct: 32 LRDDEPHFR 40


>sp|FLPA_THEAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermoplasma acidophilum (strain

Query: 1 LRIDHPNFRE 10
+R +H N+RE
Sbjct: 44 IRFEHANYRE 53


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM

Query: 1 LRIDHPNFR 9
LR D P+FR
Sbjct: 32 LRDDEPHFR 40


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 LRIDHPNFR 9
LR D P+FR
Sbjct: 32 LRDDEPHFR 40


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 LRIDHPNFR 9
LR D P+FR
Sbjct: 32 LRDDEPHFR 40


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 LRIDHPNFR 9
LR D P+FR
Sbjct: 32 LRDDEPHFR 40


>sp|AATB_METLZ|A-TYPE ATP synthase subunit B|Methanocorpusculum labreanum (strain ATCC

Query: 5 HPNFRE 10
HPN+R+
Sbjct: 453 HPNYRK 458


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IDHPNFRE 10
+D PN RE
Sbjct: 31 VDKPNIRE 38


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 LRIDHPNFRE 10
LRI+H FR+
Sbjct: 5 LRINHRPFRD 14


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 HPNFRE 10
HP+FRE
Sbjct: 438 HPSFRE 443


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 HPNFRE 10
HP+FRE
Sbjct: 438 HPSFRE 443


>sp|Y1865_ARCFU|UNCHARACTERIZED protein AF_1865|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRIDHPNF 8
+++DH NF
Sbjct: 126 VKVDHQNF 133


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 HPNFRE 10
HP+FRE
Sbjct: 438 HPSFRE 443


>sp|Y1405_METJA|ACYLPHOSPHATASE-LIKE protein MJ1405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RIDHPNFRE 10
RI H FRE
Sbjct: 16 RIQHVGFRE 24


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 3 IDHPNF 8
+DHP+F
Sbjct: 25 VDHPSF 30


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum (strain

Query: 1 LRIDHPN 7
LR+DH N
Sbjct: 192 LRVDHTN 198


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter thermautotrophicus

Query: 1 LRIDHPNF 8
LR+D P F
Sbjct: 100 LRVDFPEF 107


>sp|RNH2_META3|RIBONUCLEASE HII|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LRIDHPNFRE 10
L+ ++PN++E
Sbjct: 116 LKEEYPNYKE 125




38|SequenceR|195|186|DDSLILRIDH

>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 DDSLILRID 9
DD+ +LR+D
Sbjct: 419 DDAAVLRVD 427


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 1 DDSLILRID 9
+DSL+++ID
Sbjct: 161 EDSLVIKID 169


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 1 DDSLILRID 9
DD+ +LR+D
Sbjct: 419 DDAAVLRVD 427


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 DDSLILRID 9
DD ILRID
Sbjct: 169 DDPFILRID 177


>sp|Y78B_METJA|UNCHARACTERIZED protein MJ0785.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DDSLILRID 9
+D LIL+ID
Sbjct: 173 NDRLILKID 181


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 DDSLILRIDH 10
DDSLI DH
Sbjct: 1047 DDSLIDSADH 1056


>sp|SELD_METKA|SELENIDE, water dikinase|Methanopyrus kandleri (strain AV19 /

Query: 1 DDSLILRID 9
DD+ ++R+D
Sbjct: 47 DDAAVIRVD 55


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DDSLILRID 9
DD+ +LRID
Sbjct: 419 DDAAVLRID 427


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DSLILRIDH 10
D ILRI+H
Sbjct: 67 DGTILRIEH 75


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSLILRIDH 10
D ILRI+H
Sbjct: 67 DGTILRIEH 75


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 3 SLILRID 9
SLILRID
Sbjct: 521 SLILRID 527


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DSLILRIDH 10
D ILRI+H
Sbjct: 67 DGTILRIEH 75


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DSLILRIDH 10
D ILRI+H
Sbjct: 67 DGTILRIEH 75


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 2 DSLILRIDH 10
D ILR++H
Sbjct: 67 DGTILRVEH 75




39|SequenceR|200|191|KEMLVDDSLI

>sp|FENR_IGNH4|FERREDOXIN--NADP reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KEMLVDDSL 9
KE+LVDD +
Sbjct: 254 KEILVDDKM 262


>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EMLVDDSLI 10
E LVDDSL+
Sbjct: 248 EELVDDSLV 256


>sp|RS3_THEGJ|SMALL ribosomal subunit protein uS3|Thermococcus gammatolerans (strain

Query: 1 KEMLVDDSL 9
KEML+D+ L
Sbjct: 13 KEMLIDEYL 21


>sp|RS3_THESM|SMALL ribosomal subunit protein uS3|Thermococcus sibiricus (strain DSM

Query: 1 KEMLVDDSL 9
KEML+D+ L
Sbjct: 13 KEMLIDEYL 21


>sp|RS3_THEKO|SMALL ribosomal subunit protein uS3|Thermococcus kodakarensis (strain

Query: 1 KEMLVDDSL 9
KEML+D+ L
Sbjct: 13 KEMLIDEFL 21


>sp|RS3_PYRHO|SMALL ribosomal subunit protein uS3|Pyrococcus horikoshii (strain ATCC

Query: 1 KEMLVDDSL 9
KEML+D+ L
Sbjct: 13 KEMLIDEFL 21


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 3 MLVDDSLI 10
MLVDD++I
Sbjct: 165 MLVDDAVI 172


Query: 3 MLVDDSLI 10
+LVDDS++
Sbjct: 345 VLVDDSIV 352


>sp|NADK_METKA|NAD kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 EMLVDDSL 9
E+LVDDSL
Sbjct: 35 EVLVDDSL 42


>sp|RS3_PYRAB|SMALL ribosomal subunit protein uS3|Pyrococcus abyssi (strain GE5 /

Query: 1 KEMLVDDSL 9
KEML+D+ L
Sbjct: 13 KEMLIDEFL 21


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 1 KEMLVDDSL 9
KE +VDD+L
Sbjct: 173 KERVVDDAL 181


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 1 KEMLVDDSL 9
KE +VDD+L
Sbjct: 173 KERVVDDAL 181


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 EMLVDDSLI 10
++ VDDSLI
Sbjct: 289 DLSVDDSLI 297


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 KEMLVDDSLI 10
+E +VD+SL+
Sbjct: 26 REAIVDNSLV 35


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 3 MLVDDSLI 10
+LVDDS++
Sbjct: 343 VLVDDSIV 350


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 3 MLVDDSLI 10
+LVDDS++
Sbjct: 343 VLVDDSIV 350


>sp|RS24_METVS|SMALL ribosomal subunit protein eS24|Methanococcus vannielii (strain

Query: 1 KEMLVDDSL 9
KEMLV D+L
Sbjct: 47 KEMLVIDTL 55




40|SequenceR|205|196|MFEEYKEMLV

>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 1 MFEEYKEML 9
MFEE+K++L
Sbjct: 566 MFEEFKDLL 574


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 MFEEYKEM 8
MFEE +EM
Sbjct: 231 MFEEIREM 238


>sp|RPO10_METJA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanocaldococcus jannaschii

Query: 1 MFEEYKEMLV 10
+FEEYKE ++
Sbjct: 17 VFEEYKERIL 26


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 1 MFEEYKEM 8
MFEE +EM
Sbjct: 231 MFEEIREM 238


>sp|Y1428_METJA|TPR repeat-containing protein MJ1428|Methanocaldococcus jannaschii

Query: 1 MFEEYKEML 9
+FEEYK+ L
Sbjct: 247 IFEEYKKAL 255


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 MFEEYKEML 9
++EEYKE L
Sbjct: 800 LYEEYKEDL 808


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FEEYKEM 8
FE YKE+
Sbjct: 135 FEHYKEL 141


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 EEYKEML 9
E+YKEML
Sbjct: 405 EKYKEML 411


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 FEEYKEMLV 10
+EEYK ++V
Sbjct: 970 YEEYKHLIV 978


>sp|Y869_ARCFU|UPF0145 protein AF_0869|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FEEYKEML 9
EEY EML
Sbjct: 51 IEEYTEML 58


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FEEYKEMLV 10
FEE+KE ++
Sbjct: 764 FEEFKEAMI 772


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 MFEEYKEML 9
+FEEY E L
Sbjct: 472 VFEEYSEKL 480




41|SequenceR|210|201|LWRRLMFEEY

>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 3 RRLMFEEY 10
RRLM EEY
Sbjct: 113 RRLMAEEY 120


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 4 RLMFEEY 10
+LMFEE+
Sbjct: 564 KLMFEEF 570


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 WRRLMFEEY 10
W RL+ +EY
Sbjct: 279 WYRLVTKEY 287


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LWRRLMFEEY 10
+WR M +EY
Sbjct: 396 IWRMPMEDEY 405


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 3 RRLMFEEY 10
RR+M E+Y
Sbjct: 295 RRMMLEKY 302




42|SequenceR|215|206|DPDAVLWRRL

>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 1 DPDAVLWRRL 10
DP ++LWRR+
Sbjct: 115 DPQSILWRRM 124


>sp|KADA_METMJ|ADENYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DPDAVLWRRL 10
DPD +L RRL
Sbjct: 124 DPDQILMRRL 133


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 2 PDAVLWRRL 10
PDAV W+ +
Sbjct: 90 PDAVFWQEI 98


>sp|KADA_METKA|ADENYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 DPDAVLWRRL 10
DPD ++ RR+
Sbjct: 120 DPDEIMMRRV 129


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DPDAVL 6
DPDAVL
Sbjct: 688 DPDAVL 693


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 PDAVLWRR 9
P A+LW R
Sbjct: 549 PCAILWSR 556


>sp|MTXA_METMA|PUTATIVE methyltransferase Mtx subunit A|Methanosarcina mazei (strain ATCC

Query: 2 PDAVLW 7
PDA +W
Sbjct: 12 PDAAIW 17


>sp|RS3A_METTH|SMALL ribosomal subunit protein eS1|Methanothermobacter

Query: 1 DPDAVLWRRL 10
DPD +L RR+
Sbjct: 39 DPDFLLKRRV 48


>sp|PELO_SACS2|PROTEIN pelota homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPDAVL 6
DPDA+L
Sbjct: 185 DPDAIL 190


>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 1 DPDAVLWR 8
DP A +WR
Sbjct: 263 DPAATVWR 270


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei (strain

Query: 2 PDAVLWR 8
PD LWR
Sbjct: 253 PDRELWR 259




43|SequenceR|220|211|PCWRCDPDAV

>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 CWRCDPDAV 10
CWRCD D +
Sbjct: 396 CWRCDTDII 404


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 CWRCDPDAV 10
CWRCD D V
Sbjct: 400 CWRCDTDIV 408


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CWRCD 6
CWRCD
Sbjct: 338 CWRCD 342


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CWRCD 6
CWRCD
Sbjct: 338 CWRCD 342


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CWRCD 6
CWRCD
Sbjct: 338 CWRCD 342


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 1 PCWRCDPD 8
P WR +PD
Sbjct: 144 PGWRANPD 151


>sp|SPEH_METJA|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanocaldococcus jannaschii (strain

Query: 3 WRCDPDAV 10
W CDP A+
Sbjct: 14 WGCDPKAL 21


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CWRC 5
CWRC
Sbjct: 396 CWRC 399


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CWRC 5
CWRC
Sbjct: 336 CWRC 339


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CWRC 5
CWRC
Sbjct: 405 CWRC 408


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CWRC 5
CWRC
Sbjct: 405 CWRC 408


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 2 CWRC 5
CWRC
Sbjct: 98 CWRC 101


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 PCWRCDPDA 9
P W+ +PDA
Sbjct: 147 PGWKPNPDA 155


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 RCDPD 8
RCDPD
Sbjct: 730 RCDPD 734


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CWRC 5
CWRC
Sbjct: 396 CWRC 399


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 CWRC 5
CWRC
Sbjct: 399 CWRC 402


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 CWRC 5
CWRC
Sbjct: 399 CWRC 402


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PCWRCDPDA 9
P WRC D
Sbjct: 469 PVWRCKKDG 477


Query: 2 CWRC 5
CWRC
Sbjct: 402 CWRC 405


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CWRC 5
CWRC
Sbjct: 410 CWRC 413


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CWRC 5
CWRC
Sbjct: 404 CWRC 407


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CWRC 5
CWRC
Sbjct: 404 CWRC 407


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CWRC 5
CWRC
Sbjct: 404 CWRC 407


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 CWRC 5
CWRC
Sbjct: 404 CWRC 407


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PCWRCDPD 8
P WRC+ +
Sbjct: 460 PIWRCNKN 467


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain ATCC

Query: 1 PCWRCDPD 8
P W DPD
Sbjct: 102 PTWSQDPD 109


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PCWRCDPD 8
P W DPD
Sbjct: 26 PFWTLDPD 33


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PCWRCDPD 8
P W DPD
Sbjct: 26 PFWTLDPD 33


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PCWRCDPD 8
P W DPD
Sbjct: 26 PFWTLDPD 33


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PCWRCDP 7
PC RC P
Sbjct: 68 PCKRCRP 74


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PCWRC 5
P WRC
Sbjct: 460 PAWRC 464


Query: 2 CWRCD 6
C+RCD
Sbjct: 392 CYRCD 396


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PCWRCDPDA 9
PC C PD
Sbjct: 29 PCRECLPDG 37


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CWRC 5
CWRC
Sbjct: 341 CWRC 344


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 CWRC 5
CWRC
Sbjct: 405 CWRC 408


Query: 1 PCWRC 5
P WRC
Sbjct: 472 PVWRC 476


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CWRCD 6
CWRCD
Sbjct: 401 CWRCD 405


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PCWRCDP 7
PC RC P
Sbjct: 30 PCARCLP 36


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CWRCD 6
CWRCD
Sbjct: 399 CWRCD 403


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CWRC 5
CWRC
Sbjct: 391 CWRC 394


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CWRC 5
CWRC
Sbjct: 340 CWRC 343


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CWRC 5
CWRC
Sbjct: 397 CWRC 400


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CWRCD 6
CWRCD
Sbjct: 179 CWRCD 183


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CWRC 5
CWRC
Sbjct: 393 CWRC 396


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CWRC 5
CWRC
Sbjct: 397 CWRC 400


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 CWRC 5
CWRC
Sbjct: 447 CWRC 450


Query: 1 PCWRCD 6
P W+C+
Sbjct: 515 PIWKCE 520


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CWRC 5
CWRC
Sbjct: 397 CWRC 400


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CWRCD 6
CWRCD
Sbjct: 341 CWRCD 345


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CWRC 5
CWRC
Sbjct: 397 CWRC 400


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PCWRCDPDAV 10
PC C P AV
Sbjct: 27 PCETCLPGAV 36


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 CWRCD 6
CWRCD
Sbjct: 341 CWRCD 345


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 CWRCD 6
CWRCD
Sbjct: 341 CWRCD 345


>sp|Y1507_ARCFU|UNCHARACTERIZED protein AF_1507|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CWRCD 6
C+RCD
Sbjct: 65 CYRCD 69


>sp|RS15_AERPE|SMALL ribosomal subunit protein uS15|Aeropyrum pernix (strain ATCC 700893

Query: 1 PCWRCDPDA 9
P W+ DP+A
Sbjct: 135 PDWKYDPEA 143


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PCWRC 5
P WRC
Sbjct: 460 PVWRC 464


Query: 2 CWRCD 6
C+RCD
Sbjct: 392 CYRCD 396


>sp|MPTA_METJA|GTP cyclohydrolase MptA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 WRCD 6
WRCD
Sbjct: 3 WRCD 6


>sp|GLCDH_SACSO|GLUCOSE 1-dehydrogenase|Saccharolobus solfataricus (Sulfolobus

Query: 1 PCWRCD 6
P W CD
Sbjct: 170 PVWTCD 175


>sp|GLCD1_SACS2|GLUCOSE 1-dehydrogenase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PCWRCD 6
P W CD
Sbjct: 170 PVWTCD 175


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CWRC 5
CWRC
Sbjct: 335 CWRC 338


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CWRC 5
CWRC
Sbjct: 340 CWRC 343


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 5 CDPDA 9
CDPDA
Sbjct: 319 CDPDA 323


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 PCWRCDPDA 9
P W +PDA
Sbjct: 144 PGWNPNPDA 152


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 PCWRCDPDA 9
P W +PDA
Sbjct: 144 PGWNPNPDA 152


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CWRC 5
CWRC
Sbjct: 389 CWRC 392


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 WRCD 6
WRCD
Sbjct: 659 WRCD 662


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 2 CWRCDPDAV 10
CW DP V
Sbjct: 192 CWSDDPSYV 200


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 WRCDPDA 9
W+ DP+A
Sbjct: 191 WKLDPNA 197


>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 3 WRCD 6
WRCD
Sbjct: 170 WRCD 173


>sp|RL15E_METAC|LARGE ribosomal subunit protein eL15|Methanosarcina acetivorans (strain

Query: 3 WRCDPDA 9
W CDP +
Sbjct: 150 WVCDPSS 156


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CWRCD 6
CW CD
Sbjct: 26 CWSCD 30


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PCWRCD 6
P W CD
Sbjct: 172 PIWTCD 177


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 5 CDPDA 9
CDPDA
Sbjct: 319 CDPDA 323


>sp|SAMP3_HALVD|SMALL archaeal modifier protein 3|Haloferax volcanii (strain ATCC 29605

Query: 3 WRCDPDA 9
WR D DA
Sbjct: 22 WRVDDDA 28


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 RCDPDAV 10
+C+PD++
Sbjct: 409 KCEPDSI 415


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CDPDAV 10
CDP AV
Sbjct: 151 CDPSAV 156


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 2 CWRCDPDAV 10
C DPDAV
Sbjct: 80 CTDIDPDAV 88


>sp|SCAF_METTH|DUF35 domain-containing scaffold protein|Methanothermobacter

Query: 5 CDPDAV 10
CDPD++
Sbjct: 96 CDPDSI 101


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 4 RCDPDAV 10
+CDP+A+
Sbjct: 183 KCDPEAL 189


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 1 PCWRCDPD 8
P W C PD
Sbjct: 171 PDWWCSPD 178


>sp|RS15_METKA|SMALL ribosomal subunit protein uS15|Methanopyrus kandleri (strain AV19 /

Query: 3 WRCDPDAV 10
W+ DP+A+
Sbjct: 139 WKYDPEAL 146


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PCWRCDPDA 9
P CDP A
Sbjct: 73 PVCECDPQA 81


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PCWRCDPD 8
P W+ DP+
Sbjct: 135 PDWKYDPE 142




44|SequenceR|225|216|GCDPAPCWRC

>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 1 GCDPAPCWRC 10
GCD CW C
Sbjct: 107 GCDYKNCWGC 116


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PAPCWRC 10
P P WRC
Sbjct: 458 PLPAWRC 464


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PAPCWRC 10
P P WRC
Sbjct: 458 PLPVWRC 464


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PAPCWRC 10
P P WRC
Sbjct: 470 PLPVWRC 476


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 PAPCWRC 10
P P WRC
Sbjct: 458 PLPIWRC 464


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PAPCWRC 10
P P WRC
Sbjct: 467 PLPVWRC 473


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CDPAPCWRC 10
C P PC C
Sbjct: 89 CVPTPCIEC 97


>sp|IORA_THEKO|INDOLEPYRUVATE oxidoreductase subunit IorA|Thermococcus kodakarensis (strain ATCC

Query: 3 DPAPCWRC 10
DP CW C
Sbjct: 621 DPTMCWGC 628


>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 3 DPAPCWR 9
DP P WR
Sbjct: 36 DPGPDWR 42


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 463 PIPVWKC 469


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 463 PIPVWKC 469


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 DPAPCWRC 10
DP CW C
Sbjct: 621 DPLMCWGC 628


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC

Query: 3 DPAPCWR 9
DP P WR
Sbjct: 61 DPGPEWR 67


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 463 PIPVWKC 469


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 463 PLPVWKC 469


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 3 DPAPCWRC 10
DP CW C
Sbjct: 621 DPLMCWGC 628


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 513 PIPIWKC 519


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 3 DPAPCWR 9
DP P WR
Sbjct: 47 DPGPEWR 53


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 3 DPAPCWRC 10
DP P RC
Sbjct: 334 DPGPVLRC 341


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 459 PIPVWQC 465


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 1 GCDPAPCWR 9
G +P PC R
Sbjct: 72 GLNPVPCTR 80


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CDPAPC 7
C P PC
Sbjct: 206 CQPCPC 211


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CDPAPC 7
C P PC
Sbjct: 205 CKPCPC 210


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PAPCWRC 10
P P W+C
Sbjct: 459 PIPIWQC 465


>sp|HIS6_METB6|IMIDAZOLE glycerol phosphate synthase subunit|Methanoregula boonei (strain

Query: 2 CDPAPCW 8
CD CW
Sbjct: 148 CDGTTCW 154


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CDPAPC 7
C P PC
Sbjct: 264 CQPLPC 269


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PAPCWRC 10
P P W C
Sbjct: 407 PIPVWYC 413


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PAPCWRC 10
P P W C
Sbjct: 406 PIPVWYC 412


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 GCDPAPCWR 9
G DP WR
Sbjct: 223 GTDPGELWR 231


>sp|Y878_METJA|UNCHARACTERIZED lipoprotein MJ0878|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DPAPCW 8
DP P W
Sbjct: 96 DPVPSW 101


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PAPCWRC 10
P P W C
Sbjct: 479 PLPVWEC 485


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 PAPCWRC 10
P P W C
Sbjct: 402 PIPIWHC 408


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PAPCWRC 10
P P W C
Sbjct: 399 PIPAWYC 405


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 PAPCWRC 10
P P W C
Sbjct: 442 PIPVWYC 448


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PAPCWRC 10
P P W C
Sbjct: 409 PIPVWYC 415


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PAPCWRC 10
P P W C
Sbjct: 403 PIPAWYC 409


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PAPCWRC 10
P P W C
Sbjct: 402 PIPIWYC 408


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 PAPCWRC 10
P P W C
Sbjct: 402 PIPIWYC 408


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 PAPCWRC 10
P P W C
Sbjct: 432 PIPVWYC 438


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain

Query: 3 DPAPCWRC 10
+ A CW C
Sbjct: 57 ETADCWVC 64




45|SequenceR|230|221|AIVAYGCDPA

>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 5 YGCDP 9
YGCDP
Sbjct: 15 YGCDP 19


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AIVAYGCD 8
A +AYGCD
Sbjct: 30 AFLAYGCD 37


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AIVAYGCD 8
A AYGCD
Sbjct: 29 AYTAYGCD 36


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AIVAYGCD 8
A AYGCD
Sbjct: 30 AFTAYGCD 37


>sp|CAPPA_PYRAR|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AIVAYGCD 8
A AYGCD
Sbjct: 31 AYTAYGCD 38


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 AIVAYGCD 8
AIVAYG D
Sbjct: 161 AIVAYGFD 168


>sp|SPEH_PYRIL|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 5 YGCDP 9
YGCDP
Sbjct: 20 YGCDP 24


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 2 IVAYGCDPA 10
+VA+G DPA
Sbjct: 4 LVAHGGDPA 12


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 AYGCD 8
AYGCD
Sbjct: 137 AYGCD 141


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 4 AYGCD 8
AYGCD
Sbjct: 135 AYGCD 139


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 AYGCDPA 10
AYG DPA
Sbjct: 31 AYGLDPA 37


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 2 IVAYGCDP 9
++ +GCDP
Sbjct: 34 VMIHGCDP 41


>sp|ARGJ_METJA|GLUTAMATE N-acetyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VAYGCD 8
V YGCD
Sbjct: 383 VCYGCD 388


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain

Query: 2 IVAYGCDP 9
++ +GCDP
Sbjct: 34 VMIHGCDP 41


>sp|NIFH1_METTM|NITROGENASE iron protein 1|Methanothermobacter marburgensis (strain ATCC

Query: 2 IVAYGCDP 9
++ +GCDP
Sbjct: 34 VMIHGCDP 41


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 2 IVAYGCDP 9
+ A GCDP
Sbjct: 13 VEAAGCDP 20


>sp|NIFH1_METTL|NITROGENASE iron protein 1|Methanothermococcus thermolithotrophicus

Query: 2 IVAYGCDP 9
++ +GCDP
Sbjct: 42 VMIHGCDP 49


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 4 AYGCDP 9
AYGC P
Sbjct: 26 AYGCPP 31


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 5 YGCDP 9
YGC+P
Sbjct: 30 YGCNP 34


>sp|ACDE_METBU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanococcoides

Query: 1 AIVAYGCDP 9
A+ Y CDP
Sbjct: 90 ALATYLCDP 98


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 5 YGCDPA 10
YGC PA
Sbjct: 21 YGCPPA 26


>sp|ARGJ_ARCFU|ARGININE biosynthesis bifunctional protein ArgJ|Archaeoglobus fulgidus

Query: 5 YGCDP 9
+GCDP
Sbjct: 286 FGCDP 290


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IVAYGCDP 9
+ A GCDP
Sbjct: 10 VEAAGCDP 17


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 2 IVAYGCDP 9
+ A GCDP
Sbjct: 10 VEAAGCDP 17


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 2 IVAYGCDP 9
+ A GCDP
Sbjct: 10 VEAAGCDP 17


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 2 IVAYGCDP 9
I +GCDP
Sbjct: 34 IFIHGCDP 41


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 5 YGCDPA 10
YGCD A
Sbjct: 697 YGCDDA 702


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 2 IVAYGCDP 9
+ A GCDP
Sbjct: 13 VEAAGCDP 20


>sp|FTSY_SULAC|SIGNAL recognition particle receptor FtsY|Sulfolobus acidocaldarius

Query: 5 YGCDPA 10
YG DPA
Sbjct: 236 YGADPA 241


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IVAYGCDP 9
+ A GCDP
Sbjct: 10 VEAAGCDP 17


>sp|NIFH_METMJ|NITROGENASE iron protein|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IVAYGCDP 9
I+ GCDP
Sbjct: 32 ILQIGCDP 39


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 2 IVAYGCDP 9
I+ GCDP
Sbjct: 32 IMLVGCDP 39


>sp|SYR_META3|ARGININE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AIVAYGCD 8
AIV YG D
Sbjct: 169 AIVVYGLD 176


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IVAYGCDP 9
I+ GCDP
Sbjct: 32 ILLVGCDP 39


>sp|NIFH_METHJ|NITROGENASE iron protein|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AIVAYGCDP 9
+++ GCDP
Sbjct: 31 SVMQIGCDP 39


>sp|ARGJ_METTH|GLUTAMATE N-acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 AYGCD 8
AYGCD
Sbjct: 384 AYGCD 388


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VAYGCDP 9
+ GCDP
Sbjct: 176 IVLGCDP 182


>sp|SPEH_METJA|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanocaldococcus jannaschii (strain

Query: 5 YGCDP 9
+GCDP
Sbjct: 14 WGCDP 18


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 2 IVAYGCDP 9
++ GCDP
Sbjct: 32 VMVVGCDP 39


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 IVAYGCDP 9
+ +GCDP
Sbjct: 34 VFIHGCDP 41


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 IVAYGCDP 9
+ +GCDP
Sbjct: 34 VFIHGCDP 41


>sp|NIFH_METAR|NITROGENASE iron protein|Methanocella arvoryzae (strain DSM 22066

Query: 2 IVAYGCDP 9
++ GCDP
Sbjct: 32 VMVVGCDP 39


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VAYGCDPA 10
+AYGC A
Sbjct: 52 LAYGCSDA 59


>sp|NIFH2_METTH|NITROGENASE iron protein 2|Methanothermobacter thermautotrophicus (strain

Query: 2 IVAYGCDP 9
++ GCDP
Sbjct: 31 VLVIGCDP 38


>sp|NIFH2_METIV|NITROGENASE iron protein 2|Methanobacterium ivanovii

Query: 2 IVAYGCDP 9
++ GCDP
Sbjct: 32 VLVIGCDP 39


>sp|MTRA2_METRM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanobrevibacter ruminantium

Query: 1 AIVAYGCDP 9
A+ GCDP
Sbjct: 92 ALYENGCDP 100


>sp|CAPPA_THEPD|PHOSPHOENOLPYRUVATE carboxylase|Thermofilum pendens (strain DSM 2475

Query: 1 AIVAYGCD 8
+ + YGCD
Sbjct: 30 SFLVYGCD 37




46|SequenceR|235|226|SACGFAIVAY

>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CGFAIV 8
CGFAI+
Sbjct: 101 CGFAII 106


>sp|Y1902_METTH|UPF0173 metal-dependent hydrolase MTH_1902|Methanothermobacter

Query: 1 SACGFAI 7
SACGF I
Sbjct: 123 SACGFII 129


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 SACGFAI 7
++CGFAI
Sbjct: 294 ASCGFAI 300


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 4 GFAIVAY 10
GFA+ AY
Sbjct: 45 GFAVTAY 51


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 SACGFAI 7
++CGFAI
Sbjct: 294 ASCGFAI 300


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SACGFAIVA 9
+ CG AIVA
Sbjct: 20 AGCGAAIVA 28




47|SequenceR|240|231|TLKPCSACGF

>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 3 KPCSACG 9
KPCS CG
Sbjct: 351 KPCSNCG 357


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 KPCSACG 9
KPC++CG
Sbjct: 271 KPCTSCG 277


>sp|RL37_META3|LARGE ribosomal subunit protein eL37|Methanococcus aeolicus (strain

Query: 3 KPCSACGF 10
K CSACGF
Sbjct: 33 KACSACGF 40


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KPCSACG 9
KPCS CG
Sbjct: 174 KPCSFCG 180


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 2 LKPCSACG 9
+ PC ACG
Sbjct: 44 VAPCKACG 51


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PCSACG 9
PC ACG
Sbjct: 51 PCPACG 56


>sp|RL37_METPE|LARGE ribosomal subunit protein eL37|Methanosphaerula palustris (strain

Query: 3 KPCSACGF 10
K CSACGF
Sbjct: 32 KVCSACGF 39


>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 CSACGF 10
C ACGF
Sbjct: 92 CQACGF 97


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 4 PCSACG 9
PC++CG
Sbjct: 565 PCTSCG 570


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PCSACG 9
PC ACG
Sbjct: 460 PCVACG 465


>sp|Y662_METJA|UNCHARACTERIZED protein MJ0662|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKPCSACG 9
+KPC CG
Sbjct: 222 IKPCILCG 229


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 5 CSACGF 10
CS CGF
Sbjct: 130 CSKCGF 135


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 CSACGF 10
CS CGF
Sbjct: 130 CSKCGF 135


>sp|RL37_METVS|LARGE ribosomal subunit protein eL37|Methanococcus vannielii (strain

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 33 KACAACGF 40


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 KPCSAC 8
KPCS C
Sbjct: 203 KPCSNC 208


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 1 TLKPCSACG 9
T K CS CG
Sbjct: 471 TSKTCSKCG 479


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 3 KPCSAC 8
KPC AC
Sbjct: 286 KPCYAC 291


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 1 TLKPCSACG 9
T + CS+CG
Sbjct: 110 TFRRCSSCG 118


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 4 PCSACG 9
PC+ CG
Sbjct: 94 PCAVCG 99


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TLKPCSACG 9
TLK C CG
Sbjct: 721 TLKRCRDCG 729


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KPCSACG 9
+PC +CG
Sbjct: 190 RPCLSCG 196


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 CSACGF 10
CS+CG+
Sbjct: 476 CSSCGY 481


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 LKPCSACG 9
L+ C ACG
Sbjct: 652 LRECPACG 659


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 LKPCSACG 9
L+ C ACG
Sbjct: 645 LRECPACG 652


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 3 KPCSAC 8
KPC AC
Sbjct: 286 KPCFAC 291


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 3 KPCSAC 8
KPC AC
Sbjct: 286 KPCFAC 291


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 5 CSACG 9
CSACG
Sbjct: 130 CSACG 134


>sp|IF2B_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 5 CSACG 9
CSACG
Sbjct: 123 CSACG 127


>sp|IF2B_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 5 CSACG 9
CSACG
Sbjct: 123 CSACG 127


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 CSACGF 10
C++CGF
Sbjct: 618 CNSCGF 623


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC

Query: 1 TLKPCSACG 9
T +PC CG
Sbjct: 19 TTEPCPECG 27


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PCSACGF 10
PCS CG
Sbjct: 127 PCSYCGL 133


>sp|RL37_METTH|LARGE ribosomal subunit protein eL37|Methanothermobacter

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 31 KVCAACGF 38


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KPCSACG 9
K CS CG
Sbjct: 406 KACSVCG 412


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 KPCSACG 9
K CS CG
Sbjct: 406 KACSVCG 412


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 KPCSACG 9
K CS CG
Sbjct: 406 KACSVCG 412


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 KPCSACG 9
K CS CG
Sbjct: 406 KACSVCG 412


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 KPCSACG 9
K CS CG
Sbjct: 406 KACSVCG 412


>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 TLKPCSACG 9
T+K C+ CG
Sbjct: 88 TVKICAECG 96


>sp|RL37_METMP|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 33 KVCAACGF 40


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 1 TLKPCSACG 9
T + CS+CG
Sbjct: 483 TSQTCSSCG 491


>sp|RL37_METM6|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 33 KVCAACGF 40


>sp|RL37_METJA|LARGE ribosomal subunit protein eL37|Methanocaldococcus jannaschii

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 33 KRCAACGF 40


>sp|RL37_METM7|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 33 KVCAACGF 40


>sp|RL37_METM5|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 33 KVCAACGF 40


>sp|RL37_HALWD|LARGE ribosomal subunit protein eL37|Haloquadratum walsbyi (strain DSM

Query: 3 KPCSACGF 10
K CS+CGF
Sbjct: 33 KVCSSCGF 40


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 3 KPCSACG 9
K C ACG
Sbjct: 71 KKCDACG 77


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 3 KPCSACG 9
K C ACG
Sbjct: 71 KKCDACG 77


>sp|RL37_METHJ|LARGE ribosomal subunit protein eL37|Methanospirillum hungatei JF-1

Query: 3 KPCSACGF 10
K CS+CGF
Sbjct: 32 KICSSCGF 39


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 2 LKPCSACG 9
+ PC CG
Sbjct: 86 IHPCGKCG 93


>sp|RL37_METMJ|LARGE ribosomal subunit protein eL37|Methanoculleus marisnigri (strain

Query: 3 KPCSACGF 10
K C+ACGF
Sbjct: 32 KVCAACGF 39


>sp|RL37_HALSA|LARGE ribosomal subunit protein eL37|Halobacterium salinarum (strain

Query: 3 KPCSACGF 10
K CS+CGF
Sbjct: 33 KVCSSCGF 40


>sp|RL37_HALS3|LARGE ribosomal subunit protein eL37|Halobacterium salinarum (strain

Query: 3 KPCSACGF 10
K CS+CGF
Sbjct: 33 KVCSSCGF 40


>sp|RL37_HALMA|LARGE ribosomal subunit protein eL37|Haloarcula marismortui (strain

Query: 3 KPCSACGF 10
K CS+CGF
Sbjct: 33 KVCSSCGF 40


>sp|RL37_METMA|LARGE ribosomal subunit protein eL37|Methanosarcina mazei (strain ATCC

Query: 3 KPCSACGF 10
K C++CGF
Sbjct: 32 KQCTSCGF 39


>sp|RL37_METAC|LARGE ribosomal subunit protein eL37|Methanosarcina acetivorans (strain

Query: 3 KPCSACGF 10
K C++CGF
Sbjct: 32 KQCTSCGF 39


>sp|RL37_METS5|LARGE ribosomal subunit protein eL37|Metallosphaera sedula (strain ATCC

Query: 1 TLKPCSACGF 10
T C+ACGF
Sbjct: 30 TKHKCAACGF 39


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 5 CSACGF 10
CS CG+
Sbjct: 330 CSVCGY 335


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 5 CSACGF 10
CS CG+
Sbjct: 330 CSVCGY 335


>sp|RL37_METST|LARGE ribosomal subunit protein eL37|Methanosphaera stadtmanae (strain

Query: 1 TLKPCSACGF 10
T K C++CGF
Sbjct: 29 TKKYCASCGF 38


>sp|RL37_METB6|LARGE ribosomal subunit protein eL37|Methanoregula boonei (strain DSM

Query: 3 KPCSACGF 10
K CS+CGF
Sbjct: 32 KVCSSCGF 39


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KPCSACG 9
+PC CG
Sbjct: 430 EPCPKCG 436


>sp|RL37_METBF|LARGE ribosomal subunit protein eL37|Methanosarcina barkeri (strain

Query: 3 KPCSACGF 10
K C++CGF
Sbjct: 32 KQCTSCGF 39


>sp|RL37_THEVO|LARGE ribosomal subunit protein eL37|Thermoplasma volcanium (strain

Query: 3 KPCSACGF 10
K CS CGF
Sbjct: 33 KRCSHCGF 40


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 4 PCSACG 9
PC CG
Sbjct: 89 PCKKCG 94


>sp|RL37_METBU|LARGE ribosomal subunit protein eL37|Methanococcoides burtonii (strain

Query: 3 KPCSACGF 10
K C++CGF
Sbjct: 32 KQCTSCGF 39


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KPCSACG 9
K CS CG
Sbjct: 406 KACSICG 412


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TLKPCSACG 9
++K C+ CG
Sbjct: 407 SIKSCNMCG 415


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 4 PCSACG 9
P SACG
Sbjct: 282 PASACG 287


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 5 CSACGF 10
CS CG+
Sbjct: 244 CSKCGY 249


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLKPC 5
TLKPC
Sbjct: 378 TLKPC 382


>sp|RL37_DESA1|LARGE ribosomal subunit protein eL37|Desulfurococcus amylolyticus

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|DNLI2_KORCO|DNA ligase 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 TLKPCSACGF 10
TL P CG+
Sbjct: 529 TLSPTHTCGW 538


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 4 PCSACG 9
PC CG
Sbjct: 220 PCRVCG 225


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KPCSACG 9
KP ACG
Sbjct: 63 KPTGACG 69


>sp|TTUA_METJA|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KPCSACG 9
K CS CG
Sbjct: 128 KKCSICG 134


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 PCSACG 9
PC CG
Sbjct: 200 PCPVCG 205


>sp|RL37_METKA|LARGE ribosomal subunit protein eL37|Methanopyrus kandleri (strain AV19

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TLKPCSACG 9
T+K C CG
Sbjct: 719 TIKRCRDCG 727


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TLKPCSACG 9
T+K C CG
Sbjct: 718 TIKRCRDCG 726


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 TLKPCSACG 9
T+K C CG
Sbjct: 718 TIKRCRDCG 726


>sp|RL37_AERPE|LARGE ribosomal subunit protein eL37|Aeropyrum pernix (strain ATCC

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLKPCSACGF 10
++K C CG+
Sbjct: 580 SIKRCRDCGY 589


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKPCSACG 9
++ C ACG
Sbjct: 646 IRECPACG 653


>sp|RL37_SACS2|LARGE ribosomal subunit protein eL37|Saccharolobus solfataricus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 1 TLKPCSACG 9
+L C ACG
Sbjct: 119 SLLKCEACG 127


>sp|RL37_METTP|LARGE ribosomal subunit protein eL37|Methanothrix thermoacetophila

Query: 3 KPCSACGF 10
K C ACGF
Sbjct: 32 KTCVACGF 39


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CSACGF 10
C ACG+
Sbjct: 26 CGACGY 31


>sp|RL37_STAMF|LARGE ribosomal subunit protein eL37|Staphylothermus marinus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RL37_ARCFU|LARGE ribosomal subunit protein eL37|Archaeoglobus fulgidus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 5 CSACGF 10
C+ACG+
Sbjct: 330 CNACGW 335


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 5 CSACGF 10
CS CG+
Sbjct: 151 CSRCGY 156


>sp|RL37_SACI1|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|RL37_SACI7|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|RL37_SACI6|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|RL37_SACI4|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|RL37_SACI3|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|RL37_SACI2|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|RL37_THEKO|LARGE ribosomal subunit protein eL37|Thermococcus kodakarensis (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RL37_THEGJ|LARGE ribosomal subunit protein eL37|Thermococcus gammatolerans (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|DAPB_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 TLKPCSACG 9
T+K +ACG
Sbjct: 88 TVKKATACG 96


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 TLKPCSACG 9
T K C +CG
Sbjct: 17 TRKICKSCG 25


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 TLKPCSACG 9
T++ C ACG
Sbjct: 169 TIENCDACG 177


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 624 LKPAKLCG 631


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 624 LKPAKLCG 631


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 675 LKPAKLCG 682


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 624 LKPAKLCG 631


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 624 LKPAKLCG 631


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 611 LKPAKLCG 618


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 672 LKPAKLCG 679


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 634 LKPAKLCG 641


>sp|RL37_SULTO|LARGE ribosomal subunit protein eL37|Sulfurisphaera tokodaii (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|Y1448_METMA|UPF0251 protein MM_1448|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 CSACGF 10
C+ACG+
Sbjct: 134 CTACGY 139


>sp|RL37_SULAC|LARGE ribosomal subunit protein eL37|Sulfolobus acidocaldarius (strain

Query: 5 CSACGF 10
C+ACGF
Sbjct: 34 CAACGF 39


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LKPCSACG 9
LKP CG
Sbjct: 670 LKPAKLCG 677


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 1 TLKPCSACG 9
T++ C ACG
Sbjct: 169 TIENCDACG 177


>sp|RL37_PYRHO|LARGE ribosomal subunit protein eL37|Pyrococcus horikoshii (strain ATCC

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RL37_PYRAB|LARGE ribosomal subunit protein eL37|Pyrococcus abyssi (strain GE5 /

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|RL37_CENSY|LARGE ribosomal subunit protein eL37|Cenarchaeum symbiosum (strain A)

Query: 5 CSACGF 10
CS+CGF
Sbjct: 35 CSSCGF 40


>sp|RL37_PYRFU|LARGE ribosomal subunit protein eL37|Pyrococcus furiosus (strain ATCC

Query: 5 CSACGF 10
C+ACGF
Sbjct: 35 CAACGF 40


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 TLKPCSACG 9
T K C CG
Sbjct: 19 TRKQCRVCG 27


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TLKPCSACG 9
T K C CG
Sbjct: 79 TSKTCPVCG 87


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 TLKPCSACG 9
T+K C CG
Sbjct: 701 TIKRCLDCG 709


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TLKPCSACGF 10
T+ CS CG+
Sbjct: 20 TVYKCSKCGY 29


>sp|RL37_NATPD|LARGE ribosomal subunit protein eL37|Natronomonas pharaonis (strain

Query: 3 KPCSACGF 10
K C++CGF
Sbjct: 33 KVCASCGF 40


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 1 TLKPCSA 7
T+KPC A
Sbjct: 99 TVKPCDA 105




48|SequenceR|245|236|GERGCTLKPC

>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 2 ERGCTLKPC 10
ERGC K C
Sbjct: 105 ERGCDYKNC 113


>sp|RS8_ARCFU|SMALL ribosomal subunit protein uS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 GERGCTLKP 9
GE+ C +KP
Sbjct: 20 GEKKCEIKP 28


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 5 CTLKPC 10
CT KPC
Sbjct: 936 CTAKPC 941


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain ATCC

Query: 2 ERGCTLKPC 10
+R C++ PC
Sbjct: 185 DRCCSIGPC 193


>sp|HIS6_IGNH4|IMIDAZOLE glycerol phosphate synthase subunit|Ignicoccus hospitalis (strain

Query: 2 ERGCTLKPC 10
+RG ++PC
Sbjct: 245 QRGVPVRPC 253


>sp|PCCA_HALMT|PROPIONYL-COA carboxylase, biotin carboxylase and|Haloferax mediterranei (strain

Query: 1 GERGCTLK 8
GER C+L+
Sbjct: 225 GERDCSLQ 232


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GERGCTLK 8
GE+G TLK
Sbjct: 283 GEQGVTLK 290


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GERGCTLK 8
G GCTLK
Sbjct: 517 GHPGCTLK 524


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 ERGCTL 7
+RGCTL
Sbjct: 93 KRGCTL 98


>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain

Query: 1 GERGCTLKP 9
G+ CT++P
Sbjct: 21 GKDSCTIRP 29


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 ERGCTLKP 9
E GC++KP
Sbjct: 347 ECGCSIKP 354


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ERGCTLKP 9
E GC++KP
Sbjct: 347 ECGCSIKP 354


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 5 CTLKPC 10
CT+ PC
Sbjct: 71 CTMGPC 76


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC

Query: 3 RGCTLKPC 10
R C + PC
Sbjct: 54 RNCNMGPC 61


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 RGCTLKPC 10
R C + PC
Sbjct: 54 RNCNMGPC 61


>sp|RL21_METBU|LARGE ribosomal subunit protein eL21|Methanococcoides burtonii (strain

Query: 1 GERGCT 6
GER CT
Sbjct: 6 GERSCT 11




49|SequenceR|250|241|FETGCGERGC

>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GCGERG 9
GCGERG
Sbjct: 441 GCGERG 446


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 4 GCGERG 9
GCGERG
Sbjct: 261 GCGERG 266


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GCGERG 9
GCGERG
Sbjct: 429 GCGERG 434


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GCGERG 9
GCGERG
Sbjct: 636 GCGERG 641


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GCGERG 9
GCGERG
Sbjct: 685 GCGERG 690


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 689 GCGERG 694


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 4 GCGERG 9
GCGERG
Sbjct: 263 GCGERG 268


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 GCGERG 9
GCGERG
Sbjct: 249 GCGERG 254


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 4 GCGERG 9
GCGERG
Sbjct: 254 GCGERG 259


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GCGERG 9
GCGERG
Sbjct: 254 GCGERG 259


Query: 2 ETGCGERG 9
ET CGE+G
Sbjct: 369 ETLCGEKG 376


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 258 GCGERG 263


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 4 GCGERG 9
GCGERG
Sbjct: 254 GCGERG 259


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 4 GCGERG 9
GCGERG
Sbjct: 254 GCGERG 259


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 4 GCGERG 9
GCGERG
Sbjct: 254 GCGERG 259


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 4 GCGERG 9
GCGERG
Sbjct: 263 GCGERG 268


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 4 GCGERG 9
GCGERG
Sbjct: 255 GCGERG 260


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 254 GCGERG 259


Query: 2 ETGCGERG 9
ET CGE+G
Sbjct: 369 ETLCGEKG 376


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 GCGERG 9
GCGERG
Sbjct: 259 GCGERG 264


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 GCGERG 9
GCGERG
Sbjct: 267 GCGERG 272


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 4 GCGERG 9
GCGERG
Sbjct: 262 GCGERG 267


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 4 GCGERG 9
GCGERG
Sbjct: 263 GCGERG 268


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 4 GCGERG 9
GCGERG
Sbjct: 264 GCGERG 269


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 4 GCGERG 9
GCGERG
Sbjct: 261 GCGERG 266


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 4 GCGERG 9
GCGERG
Sbjct: 261 GCGERG 266


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 4 GCGERG 9
GCGERG
Sbjct: 264 GCGERG 269


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 4 GCGERG 9
GCGERG
Sbjct: 267 GCGERG 272


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 260 GCGERG 265


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 253 GCGERG 258


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GCGERG 9
GCGERG
Sbjct: 257 GCGERG 262


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 4 GCGERG 9
GCGERG
Sbjct: 262 GCGERG 267


>sp|RS5_METS3|SMALL ribosomal subunit protein uS5|Methanobrevibacter smithii (strain

Query: 4 GCGERGC 10
GCG+ GC
Sbjct: 115 GCGDWGC 121


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ETGCGERGC 10
E C E+GC
Sbjct: 258 EKACEEKGC 266


>sp|RS5_METTH|SMALL ribosomal subunit protein uS5|Methanothermobacter

Query: 4 GCGERGC 10
GCG+ GC
Sbjct: 117 GCGDWGC 123


>sp|TRPB_META3|TRYPTOPHAN synthase beta chain|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ETGCGERG 9
ETG GE G
Sbjct: 106 ETGAGEHG 113


>sp|RL11_NATPD|LARGE ribosomal subunit protein uL11|Natronomonas pharaonis (strain

Query: 1 FETGCGE 7
FETG GE
Sbjct: 81 FETGSGE 87


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 CGERG 9
CGERG
Sbjct: 263 CGERG 267


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 5 CGERG 9
CGERG
Sbjct: 263 CGERG 267


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 CGERG 9
CGERG
Sbjct: 263 CGERG 267


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 CGERG 9
CGERG
Sbjct: 263 CGERG 267


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 CGERG 9
CGERG
Sbjct: 263 CGERG 267


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 CGERGC 10
CGE+ C
Sbjct: 427 CGEKAC 432


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 5 CGERGC 10
CGE+ C
Sbjct: 427 CGEKAC 432


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 CGERGC 10
CG+ GC
Sbjct: 436 CGDEGC 441


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FETGCGER 8
E GCG R
Sbjct: 36 LEKGCGRR 43


>sp|RL11_HALMA|LARGE ribosomal subunit protein uL11|Haloarcula marismortui (strain

Query: 1 FETGCGE 7
FETG GE
Sbjct: 81 FETGSGE 87


>sp|RL11_HALLT|LARGE ribosomal subunit protein uL11|Halorubrum lacusprofundi (strain

Query: 1 FETGCGE 7
FETG GE
Sbjct: 81 FETGSGE 87


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 5 CGERGC 10
C ERGC
Sbjct: 103 CVERGC 108


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 5 CGERGC 10
CG RGC
Sbjct: 152 CGGRGC 157


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 2 ETGCGERGC 10
+ CG +GC
Sbjct: 90 QCSCGGKGC 98


>sp|RPO3_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma acidophilum (strain ATCC

Query: 2 ETGCGERGC 10
+ CG +GC
Sbjct: 90 QCSCGGKGC 98


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 ETGCG 6
ETGCG
Sbjct: 187 ETGCG 191


>sp|FAU1_PYRCJ|PROBABLE ribonuclease FAU-1|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GCGERG 9
CGERG
Sbjct: 432 ACGERG 437


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 4 GCGERG 9
GC ERG
Sbjct: 141 GCDERG 146


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ETGCGERGC 10
E G GER C
Sbjct: 184 EVGDGERVC 192


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 2 ETGCGERGC 10
E G GER C
Sbjct: 169 EVGDGERVC 177


>sp|RPO3_METKA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanopyrus kandleri (strain AV19 /

Query: 5 CGERGC 10
CG +GC
Sbjct: 89 CGGKGC 94


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 FETGCGE 7
FE+ CGE
Sbjct: 213 FESECGE 219


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 2 ETGCGERGC 10
E CG GC
Sbjct: 81 ECSCGGEGC 89




50|SequenceR|255|246|KCHYCFETGC

>sp|PYRI_IGNH4|ASPARTATE carbamoyltransferase regulatory chain|Ignicoccus hospitalis (strain

Query: 1 KCHYCFE 7
KCHYC E
Sbjct: 137 KCHYCGE 143


>sp|PYRI_THESM|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus sibiricus

Query: 1 KCHYCFET 8
KCHYC T
Sbjct: 132 KCHYCERT 139


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 1 KCHYCFET 8
+CHYC T
Sbjct: 135 RCHYCERT 142


>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 1 KCHYCFET 8
+CHYC T
Sbjct: 134 RCHYCERT 141


>sp|PYRI_PYRHO|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus horikoshii (strain

Query: 1 KCHYCFET 8
+CHYC T
Sbjct: 135 RCHYCERT 142


>sp|PYRI_PYRAB|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus abyssi (strain GE5

Query: 1 KCHYCFET 8
+CHYC T
Sbjct: 135 RCHYCERT 142


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 3 HYCFETGC 10
HY F+ GC
Sbjct: 407 HYAFDEGC 414


>sp|PYRI_THEON|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus onnurineus

Query: 1 KCHYCFET 8
+CHYC T
Sbjct: 134 RCHYCERT 141


>sp|PYRI_PYRFU|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus furiosus (strain

Query: 1 KCHYCFET 8
+CHYC T
Sbjct: 135 RCHYCERT 142


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 4 YCFETGC 10
YC E GC
Sbjct: 89 YCLEKGC 95


>sp|PYRI_METS3|ASPARTATE carbamoyltransferase regulatory chain|Methanobrevibacter smithii

Query: 1 KCHYC 5
+CHYC
Sbjct: 141 RCHYC 145


>sp|PYRI_ARCFU|ASPARTATE carbamoyltransferase regulatory chain|Archaeoglobus fulgidus

Query: 1 KCHYC 5
+CHYC
Sbjct: 137 RCHYC 141


>sp|PYRI_THEPD|ASPARTATE carbamoyltransferase regulatory chain|Thermofilum pendens (strain

Query: 1 KCHYCFET 8
KC YC ET
Sbjct: 137 KCAYCEET 144


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 KCHYCFETG 9
K YC ETG
Sbjct: 177 KTEYCHETG 185


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 1 KCHYC 5
+CHYC
Sbjct: 138 RCHYC 142


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 3 HYCFETGC 10
HY F GC
Sbjct: 90 HYAFPQGC 97


>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CHYCFETGC 10
C +C ET C
Sbjct: 419 CSWCGETDC 427


>sp|Y1632_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 KCHYCF 6
KC YCF
Sbjct: 48 KCKYCF 53


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CHYC 5
CHYC
Sbjct: 99 CHYC 102


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 2 CHYC 5
CHYC
Sbjct: 93 CHYC 96


>sp|RPO3_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo3|Aeropyrum pernix (strain ATCC 700893

Query: 4 YCFETGC 10
YC ET C
Sbjct: 225 YCAETAC 231


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 1 KCHYCFETGC 10
+ H C E GC
Sbjct: 113 EAHPCVEEGC 122


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 1 KCHYCFETG 9
KC YC + G
Sbjct: 23 KCFYCHKEG 31


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 HYCFET 8
HYCF +
Sbjct: 105 HYCFNS 110


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KCHYCFE 7
KCH C E
Sbjct: 447 KCHVCGE 453


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KCHYCFETG 9
KC YC + G
Sbjct: 23 KCFYCHKEG 31


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 1 KCHYCFETG 9
KC YC + G
Sbjct: 23 KCFYCHKEG 31


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 1 KCHYCFETG 9
KC YC + G
Sbjct: 23 KCFYCHKEG 31


>sp|Y550_METJA|UNCHARACTERIZED protein MJ0550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CHYCFETGC 10
C+Y E GC
Sbjct: 60 CYYAKEGGC 68


>sp|MOAA_METVS|PROBABLE GTP 3',8-cyclase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KCHYCFETG 9
KC YC G
Sbjct: 23 KCFYCHREG 31


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 CHYCFETGC 10
C YC GC
Sbjct: 139 CGYCNGEGC 147


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 KCHYCFETGC 10
K YC ETG
Sbjct: 183 KSEYCHETGI 192


>sp|PYRI_METST|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaera stadtmanae

Query: 1 KCHYCFET 8
+C+YC T
Sbjct: 136 RCYYCERT 143


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CHYCFE----TGC 10
CH C E TGC
Sbjct: 3 CHQCQETIKGTGC 15


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 5 CFETGC 10
C ETGC
Sbjct: 301 CDETGC 306


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 HYCFETG 9
HY FE G
Sbjct: 414 HYAFEGG 420


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KCHYCFE 7
KC +C E
Sbjct: 175 KCSFCIE 181


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 KCHYCFE 7
K HY FE
Sbjct: 406 KVHYAFE 412


>sp|PYRI_SACI7|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 KCHYC 5
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI6|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 KCHYC 5
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI4|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 KCHYC 5
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI3|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 KCHYC 5
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 KCHYC 5
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI1|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 1 KCHYC 5
KC YC
Sbjct: 141 KCEYC 145


>sp|SAND_THEX5|S-ADENOSYLMETHIONINE-DEPENDENT nucleotide dehydratase|Thermoplasmatales archaeon (strain

Query: 1 KCHYCFE 7
+C +CF+
Sbjct: 25 RCEHCFD 31


>sp|PYRI_NITMS|ASPARTATE carbamoyltransferase regulatory chain|Nitrosopumilus maritimus

Query: 1 KCHYC 5
KC YC
Sbjct: 137 KCRYC 141


>sp|PYRI_CENSY|ASPARTATE carbamoyltransferase regulatory chain|Cenarchaeum symbiosum (strain

Query: 1 KCHYC 5
KC YC
Sbjct: 137 KCRYC 141


>sp|MOAA_METAR|PROBABLE GTP 3',8-cyclase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KCHYCFETG 9
KC YC G
Sbjct: 24 KCIYCHNEG 32


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 KCHYCFET 8
KC YC T
Sbjct: 678 KCPYCGST 685


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 KCHYCFETG 9
K YC E G
Sbjct: 180 KTEYCHENG 188




51|SequenceR|260|251|PHWIQKCHYC

>sp|Y1057_METJA|UNCHARACTERIZED glycosyltransferase MJ1057|Methanocaldococcus jannaschii (strain

Query: 2 HWIQKCHYC 10
HW K H+C
Sbjct: 237 HWKNKKHFC 245


>sp|PYRI_THESM|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus sibiricus

Query: 6 KCHYC 10
KCHYC
Sbjct: 132 KCHYC 136


>sp|PYRI_IGNH4|ASPARTATE carbamoyltransferase regulatory chain|Ignicoccus hospitalis (strain

Query: 6 KCHYC 10
KCHYC
Sbjct: 137 KCHYC 141


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 HWIQKCHY 9
HW + C Y
Sbjct: 30 HWSEHCSY 37


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 HWIQKCHY 9
HW + C Y
Sbjct: 30 HWSEHCSY 37


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HWIQKCHY 9
HW + C Y
Sbjct: 30 HWSEHCSY 37


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HWIQKCHY 9
HW + C Y
Sbjct: 30 HWSEHCSY 37


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 3 WIQKCH 8
WI +CH
Sbjct: 148 WIWRCH 153


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WIQKCH 8
WI +CH
Sbjct: 148 WIWRCH 153


>sp|Y3503_METJA|UNCHARACTERIZED protein MJECL03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WIQKCHYC 10
WI KC+ C
Sbjct: 96 WIIKCNLC 103


>sp|ADEC_METB6|ADENINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 PHWIQKCHYC 10
P+ + +C +C
Sbjct: 257 PYTVSRCSFC 266


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 HWIQKCHY 9
HW + C Y
Sbjct: 30 HWSEHCAY 37


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 HWIQKCHYC 10
WI KC C
Sbjct: 120 QWILKCEAC 128


>sp|Y1170_THEAC|PUTATIVE sulfur carrier protein Ta1170/Ta1414|Thermoplasma acidophilum

Query: 1 PHWIQK 6
P WIQK
Sbjct: 50 PAWIQK 55


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PHWIQKCHY 9
P W++ HY
Sbjct: 261 PGWMRGSHY 269


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PHWIQKCHY 9
P W++ HY
Sbjct: 261 PGWMRGSHY 269


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 4 IQKCHYC 10
++KC YC
Sbjct: 477 VEKCVYC 483


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 HWIQKCHYC 10
+W+ KC C
Sbjct: 412 NWVMKCADC 420


>sp|TOP3_SACS2|DNA topoisomerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 IQKCHYC 10
I KC YC
Sbjct: 599 IVKCKYC 605


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 HWIQKCHYC 10
+W+ KC C
Sbjct: 412 NWVAKCADC 420


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 WIQKCHYC 10
W+ KC C
Sbjct: 413 WVDKCADC 420


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 WIQKCHYC 10
W+ KC C
Sbjct: 413 WVDKCADC 420


>sp|PYRI_NITMS|ASPARTATE carbamoyltransferase regulatory chain|Nitrosopumilus maritimus

Query: 4 IQKCHYC 10
+ KC YC
Sbjct: 135 VLKCRYC 141


>sp|PYRI_CENSY|ASPARTATE carbamoyltransferase regulatory chain|Cenarchaeum symbiosum (strain

Query: 4 IQKCHYC 10
+ KC YC
Sbjct: 135 VLKCRYC 141


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HWIQK 6
HWI+K
Sbjct: 283 HWIEK 287


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WIQKCH 8
W+ +CH
Sbjct: 149 WLWRCH 154


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 WIQKCHYC 10
W+ KC C
Sbjct: 413 WVAKCADC 420


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 4 IQKCHY 9
+++CHY
Sbjct: 189 LERCHY 194


>sp|PYRI_SACI7|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 6 KCHYC 10
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI6|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 6 KCHYC 10
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI4|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 6 KCHYC 10
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI3|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 6 KCHYC 10
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 6 KCHYC 10
KC YC
Sbjct: 141 KCEYC 145


>sp|PYRI_SACI1|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 6 KCHYC 10
KC YC
Sbjct: 141 KCEYC 145


>sp|DPCKG_THEAC|GTP-DEPENDENT dephospho-CoA kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 KCHYC 10
KCH C
Sbjct: 143 KCHVC 147


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 6 KCHYC 10
KCH C
Sbjct: 447 KCHVC 451


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HWIQKC 7
HW KC
Sbjct: 1295 HWNDKC 1300


>sp|RS27_METKA|SMALL ribosomal subunit protein eS27|Methanopyrus kandleri (strain AV19

Query: 6 KCHYC 10
KCH C
Sbjct: 46 KCHIC 50


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 4 IQKCHYC 10
++KC YC
Sbjct: 238 VEKCMYC 244




52|SequenceR|265|256|DCTQNPHWIQ

>sp|Y2034_SULTO|UNCHARACTERIZED solute-binding protein STK_20340|Sulfurisphaera tokodaii (strain

Query: 3 TQNPHWIQ 10
TQ+P+W Q
Sbjct: 148 TQSPYWNQ 155


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 CTQNPHWI 9
C NPH++
Sbjct: 249 CFNNPHYV 256


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 1 DCTQNPHWIQ 10
D T P WI+
Sbjct: 92 DATAEPDWIE 101


>sp|Y2239_ARCFU|UNCHARACTERIZED protein AF_2239|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TQNPHWI 9
T+ PHW+
Sbjct: 287 TEMPHWL 293


>sp|GGGPS_METTM|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter marburgensis (strain ATCC

Query: 3 TQNPHWI 9
+ NP+WI
Sbjct: 98 SNNPYWI 104


>sp|RS8_STAMF|SMALL ribosomal subunit protein uS8|Staphylothermus marinus (strain

Query: 1 DCTQNPHWIQ 10
D + PHW++
Sbjct: 85 DLERMPHWLR 94


>sp|GGGPS_METTH|GERANYLGERANYLGLYCERYL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 3 TQNPHWI 9
+ NP+WI
Sbjct: 98 STNPYWI 104


>sp|GGGPS_METST|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 TQNPHWI 9
+ NP+WI
Sbjct: 98 STNPYWI 104


>sp|GGGPS_METS3|GERANYLGERANYLGLYCERYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TQNPHWI 9
+ NP+WI
Sbjct: 99 STNPYWI 105


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 TQNPHWI 9
+ NP+WI
Sbjct: 96 STNPYWI 102


>sp|RELE4_METJA|PUTATIVE toxin RelE4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DCTQNPH 7
+ TQNPH
Sbjct: 34 EITQNPH 40


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 1 DCTQNPHWIQ 10
D T N W+Q
Sbjct: 12 DLTNNKVWVQ 21


>sp|HIS7_PYRCJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 6 PHWIQ 10
PHW++
Sbjct: 131 PHWVR 135


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DCTQNPHWI 9
D NP WI
Sbjct: 70 DLPYNPKWI 78


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PHWIQ 10
PHW++
Sbjct: 442 PHWVE 446


>sp|RS8E_METTH|SMALL ribosomal subunit protein eS8|Methanothermobacter

Query: 3 TQNPHWIQ 10
T NPH+++
Sbjct: 84 TANPHFVR 91


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DCTQNPHWIQ 10
+CT W++
Sbjct: 173 ECTSKDQWVR 182


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 1 DCTQNPHWIQ 10
DC+ + W++
Sbjct: 98 DCSPHQQWLE 107




53|SequenceR|270|261|EQRAADCTQN

***** No hits found ******


54|SequenceR|275|266|LSQAREQRAA

>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LSQAREQRAA 10
L++AR Q+AA
Sbjct: 488 LAEARSQKAA 497


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 LSQAREQRAA 10
LS ARE RAA
Sbjct: 333 LSVAREFRAA 342




55|SequenceR|280|271|ITRLRLSQAR

***** No hits found ******


56|SequenceR|285|276|ISSSRITRLR

***** No hits found ******


57|SequenceR|290|281|EQSYSISSSR

>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EQSYSISS 8
E+SYSIS+
Sbjct: 305 EESYSISA 312




58|SequenceR|295|286|AAAGSEQSYS

>sp|RNH2_METMP|RIBONUCLEASE HII|Methanococcus maripaludis (strain DSM 14266

Query: 1 AAAGSEQSYS 10
A + SEQS+S
Sbjct: 129 ACSSSEQSFS 138




59|SequenceR|300|291|PKIDDAAAGS

>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 1 PKIDDAAAGS 10
P IDD AGS
Sbjct: 313 PGIDDVMAGS 322


>sp|CBIX_SULAC|SIROHYDROCHLORIN cobaltochelatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKIDDAA 7
PKID+AA
Sbjct: 44 PKIDEAA 50


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 1 PKIDDAAAGS 10
P +D+A AGS
Sbjct: 321 PDLDNALAGS 330


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PKIDDAA 7
PK+DD A
Sbjct: 41 PKVDDKA 47


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 PKIDDAAA 8
P+ID AAA
Sbjct: 397 PRIDSAAA 404


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 PKIDDAAAGS 10
P +DD +GS
Sbjct: 314 PHVDDVVSGS 323


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 1 PKIDDAAAGS 10
P +DD +GS
Sbjct: 314 PHLDDVVSGS 323


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 PKIDDAAAGS 10
P +DDA AG+
Sbjct: 320 PDLDDAMAGA 329


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 PKIDDAAAGS 10
P +DDA AG+
Sbjct: 320 PDLDDAMAGA 329


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 1 PKIDDAAA 8
P+ID AAA
Sbjct: 400 PRIDTAAA 407


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 1 PKIDDAAAGS 10
PK++ A AGS
Sbjct: 324 PKLETALAGS 333


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 PKIDDAAAGS 10
P +DD AGS
Sbjct: 323 PGLDDVIAGS 332


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 1 PKIDDAAA 8
P+ID AAA
Sbjct: 397 PRIDTAAA 404


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 1 PKIDDAAAGS 10
PK+D AGS
Sbjct: 313 PKLDGVIAGS 322


>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 PKIDDAAAGS 10
P +DDA AG+
Sbjct: 322 PDLDDAMAGA 331


>sp|RL22_METHJ|LARGE ribosomal subunit protein uL22|Methanospirillum hungatei JF-1

Query: 2 KIDDAAA 8
K+DDAAA
Sbjct: 41 KLDDAAA 47




60|SequenceR|305|296|ACRPCPKIDD

>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CRPCPKIDD 10
C+PCP D+
Sbjct: 205 CKPCPCRDN 213


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CRPCP 6
C+PCP
Sbjct: 206 CQPCP 210


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 2 CRPCPKIDD 10
C+P KIDD
Sbjct: 92 CKPEVKIDD 100


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 PCPKIDD 10
PC +IDD
Sbjct: 121 PCYRIDD 127


>sp|Y008_METKA|UNCHARACTERIZED protein MK0008|Methanopyrus kandleri (strain AV19 /

Query: 1 ACRPCPK 7
AC PC K
Sbjct: 81 ACGPCSK 87


>sp|AROC_CALMQ|CHORISMATE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 RPCPKIDD 10
+P P IDD
Sbjct: 180 KPLPMIDD 187


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus

Query: 5 CPKIDD 10
CPK+DD
Sbjct: 43 CPKLDD 48


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 RPCPKIDD 10
+PC ++DD
Sbjct: 122 QPCIRLDD 129


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RPCPKIDD 10
+PC ++DD
Sbjct: 124 QPCIRLDD 131


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 4 PCPKIDD 10
P PKID+
Sbjct: 268 PLPKIDE 274


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 5 CPKIDD 10
CP++DD
Sbjct: 160 CPRVDD 165


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 1 ACRPCPKID 9
A PC K+D
Sbjct: 167 AADPCVKVD 175


>sp|RL37_METMJ|LARGE ribosomal subunit protein eL37|Methanoculleus marisnigri (strain

Query: 1 ACRPCPKID 9
ACR C KI
Sbjct: 18 ACRRCGKIS 26


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CRPCPKID 9
CR C +ID
Sbjct: 148 CRNCGEID 155


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CRPCPKIDD 10
C P ++DD
Sbjct: 26 CNPADRLDD 34




61|SequenceR|310|301|KIIYAACRPC

>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 3 IYAACRPC 10
IYAACR C
Sbjct: 535 IYAACRRC 542


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 3 IYAACRPC 10
+YAACR C
Sbjct: 172 LYAACRKC 179


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 IYAACRPC 10
+YAACR C
Sbjct: 173 LYAACRRC 180


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 IYAACRPC 10
+YAACR C
Sbjct: 172 LYAACRRC 179


>sp|RPIA_METTH|RIBOSE-5-PHOSPHATE isomerase A|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 KIIYAACRP 9
++I AACRP
Sbjct: 137 EVIPAACRP 145


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 KIIYAACRPC 10
K+++ RPC
Sbjct: 58 KVVFVTARPC 67


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IYAACR 8
IYAACR
Sbjct: 169 IYAACR 174


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IYAACR 8
IYAACR
Sbjct: 168 IYAACR 173


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 3 IYAACR 8
IYAACR
Sbjct: 167 IYAACR 172


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 3 IYAACR 8
IYAACR
Sbjct: 170 IYAACR 175


>sp|HEM3_AERPE|PROBABLE porphobilinogen deaminase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KIIYAACRP 9
KI+Y A RP
Sbjct: 93 KIVYIASRP 101


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IIYAACR 8
+IYAACR
Sbjct: 168 VIYAACR 174


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 KIIYAACRPC 10
KI+ + CR C
Sbjct: 94 KILRSTCRKC 103


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIIYAACRPC 10
++I A+C PC
Sbjct: 353 ELIIASCDPC 362


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 5 AACRPC 10
AAC PC
Sbjct: 220 AACAPC 225


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 IIYAACRPC 10
I+YA PC
Sbjct: 273 ILYAGVSPC 281


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 YAACRP 9
Y ACRP
Sbjct: 30 YDACRP 35


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC 700922

Query: 3 IYAACR 8
+YAACR
Sbjct: 181 LYAACR 186


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 IIYAACRPC 10
+IYA C C
Sbjct: 146 VIYARCSRC 154


>sp|TF2B7_HALSA|TRANSCRIPTION initiation factor IIB 7|Halobacterium salinarum (strain ATCC 700922

Query: 3 IYAACR 8
+YAACR
Sbjct: 187 LYAACR 192


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 KIIYAACRPC 10
KI+ + CR C
Sbjct: 94 KILSSICRKC 103


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IIYAACRP 9
I+Y +C P
Sbjct: 397 IVYVSCNP 404


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 IIYAACRP 9
I+Y +C P
Sbjct: 363 IVYVSCNP 370


>sp|ATRMA_PYRFU|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus furiosus (strain

Query: 2 IIYAACRP 9
I+Y +C P
Sbjct: 364 IVYVSCNP 371


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 IIYAACRP 9
I+Y +C P
Sbjct: 362 IVYVSCNP 369


>sp|Y83A_METJA|PROBABLE pilin MJ0832.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KIIYAACRP 9
KI+Y C P
Sbjct: 72 KIVYIKCPP 80


>sp|TF2B1_THEKO|TRANSCRIPTION initiation factor IIB 1|Thermococcus kodakarensis (strain ATCC

Query: 3 IYAACR 8
+YAACR
Sbjct: 159 VYAACR 164


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IYAACR 8
+YAACR
Sbjct: 174 LYAACR 179


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 3 IYAACR 8
+YAACR
Sbjct: 159 VYAACR 164


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IYAACR 8
+YAACR
Sbjct: 174 LYAACR 179


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 3 IYAACR 8
+YAACR
Sbjct: 168 LYAACR 173


>sp|RS17_METAR|SMALL ribosomal subunit protein uS17|Methanocella arvoryzae (strain DSM

Query: 1 KIIYAACRP 9
K++ A CRP
Sbjct: 85 KVVIAECRP 93


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 2 IIYAACRP 9
+IY +C P
Sbjct: 364 LIYVSCNP 371


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 2 IIYAACRP 9
+IY +C P
Sbjct: 362 LIYVSCNP 369


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IYAACR 8
IYAACR
Sbjct: 169 IYAACR 174


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 3 IYAACR 8
IYAACR
Sbjct: 175 IYAACR 180


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 2 IIYAACRP 9
++Y +C P
Sbjct: 360 VVYVSCNP 367


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IYAACR 8
+YAACR
Sbjct: 159 VYAACR 164


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 3 IYAACR 8
+YAACR
Sbjct: 159 VYAACR 164


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IYAACR 8
+YAACR
Sbjct: 159 VYAACR 164


>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 1 KIIYAACRP 9
K+I CRP
Sbjct: 92 KVIIGECRP 100




62|SequenceR|315|306|SGDNMKIIYA

>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGDNMKIIYA 10
GD +KIIY+
Sbjct: 658 KGDTLKIIYS 667


>sp|Y1841_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus

Query: 2 GDNMKIIYA 10
GDN+K+I A
Sbjct: 2 GDNLKVIEA 10


>sp|RRP42_SULTO|EXOSOME complex component Rrp42|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GDNMKII 8
GDN+KII
Sbjct: 177 GDNVKII 183


>sp|Y344_METJA|UNCHARACTERIZED protein MJ0344|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDNMKII 8
GD+MKII
Sbjct: 107 GDSMKII 113


>sp|Y451_ARCFU|UNCHARACTERIZED protein AF_0451|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SGDNMKII 8
SGDN K+I
Sbjct: 95 SGDNKKLI 102




63|SequenceR|320|311|TMHNCSGDNM

>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TMHNCSGDNM 10
T HNC G N+
Sbjct: 232 TFHNCLGQNL 241


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TMHNCSGDNM 10
T HNC G N+
Sbjct: 232 TFHNCLGQNL 241


>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 MHNCSGDNM 10
+HNC G+N+
Sbjct: 3 IHNCEGENV 11


>sp|RL4_HALWD|LARGE ribosomal subunit protein uL4|Haloquadratum walsbyi (strain DSM

Query: 1 TMHNCSGD 8
T+HN +GD
Sbjct: 4 TIHNLNGD 11


>sp|PSA_PYRFU|PROTEASOME subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TMHNCSGDNM 10
TM N S DN+
Sbjct: 201 TMENPSADNI 210


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TMHNC 5
T+HNC
Sbjct: 517 TLHNC 521


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 TMHNCS 6
T+HNC+
Sbjct: 347 TIHNCT 352




64|SequenceR|325|316|GCVACTMHNC

>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GCVACTMHN 9
GC+ MHN
Sbjct: 376 GCIPTVMHN 384


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 GCVACT 6
GC ACT
Sbjct: 98 GCAACT 103


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 1 GCVACT 6
GC ACT
Sbjct: 98 GCAACT 103


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 GCVACT 6
GC ACT
Sbjct: 91 GCAACT 96


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 2 CVACTMHN 9
C ACT H+
Sbjct: 277 CPACTRHD 284


>sp|PYRI_METVS|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus vannielii

Query: 1 GCVACTMHNC 10
G V CT NC
Sbjct: 102 GIVKCTNPNC 111


>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CVACTMH 8
C++C++H
Sbjct: 402 CISCSVH 408


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CVACTMH 8
C++C++H
Sbjct: 418 CISCSVH 424


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 1 GCVACT 6
GC ACT
Sbjct: 88 GCAACT 93


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus (strain

Query: 1 GCVACTMHNC 10
G V C+ NC
Sbjct: 101 GIVKCSNQNC 110


>sp|PYRI_METMP|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 GCVACTMHNC 10
G + CT NC
Sbjct: 102 GIIKCTNPNC 111


>sp|PYRI_METM7|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 GCVACTMHNC 10
G + CT NC
Sbjct: 102 GIIKCTNPNC 111


>sp|PYRI_METM6|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 GCVACTMHNC 10
G + CT NC
Sbjct: 102 GIIKCTNPNC 111


>sp|PYRI_METM5|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus maripaludis

Query: 1 GCVACTMHNC 10
G + CT NC
Sbjct: 102 GIIKCTNPNC 111


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCVACTMHNC 10
GC AC +C
Sbjct: 48 GCDACLKGDC 57


>sp|PYRI_METJA|ASPARTATE carbamoyltransferase regulatory chain|Methanocaldococcus jannaschii

Query: 1 GCVACTMHNC 10
G + CT NC
Sbjct: 104 GTLKCTNPNC 113


>sp|PYRI_META3|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus aeolicus

Query: 1 GCVACTMHNC 10
G + CT NC
Sbjct: 109 GILKCTNPNC 118




65|SequenceR|330|321|WCFECGCVAC

>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CFECGCV 8
C +CGCV
Sbjct: 61 CAKCGCV 67


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 2 CFECGCV 8
C +CGCV
Sbjct: 57 CEDCGCV 63


>sp|AGL12_HALVD|LOW-SALT glycan biosynthesis protein Agl12|Haloferax volcanii (strain ATCC

Query: 1 WCFECGCVAC 10
W FE G AC
Sbjct: 292 WSFEDGLEAC 301


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 3 FECGCVAC 10
F C C AC
Sbjct: 273 FPCSCPAC 280


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 2 CFECGCV 8
C CGCV
Sbjct: 62 CETCGCV 68


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 CFECG 6
C+ECG
Sbjct: 103 CYECG 107


>sp|IF2B_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 CFECG 6
C+ECG
Sbjct: 103 CYECG 107


>sp|NRPA_METMA|NIF-REGULATING protein A|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CFECGCV 8
C ECG V
Sbjct: 3 CLECGLV 9


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 2 CFECGCVA 9
C ECG +A
Sbjct: 547 CAECGMIA 554


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 2 CFECGCV 8
C CGCV
Sbjct: 62 CEMCGCV 68


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 2 CFECGCV 8
C CGCV
Sbjct: 62 CEMCGCV 68


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 2 CFECGCV 8
C CGCV
Sbjct: 62 CEMCGCV 68


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 2 CFECGCV 8
C CGCV
Sbjct: 62 CEMCGCV 68


>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 1 WCFECGCV 8
+C E GC+
Sbjct: 89 YCLEKGCI 96


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CFECGCVAC 10
C GCV C
Sbjct: 18 CCVVGCVTC 26


>sp|ACDG_METAC|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CFECGCVAC 10
C ECG C
Sbjct: 18 CGECGEATC 26


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 2 CFECGCVAC 10
C ECG C
Sbjct: 18 CGECGEATC 26


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 5 CGCVAC 10
CG VAC
Sbjct: 2 CGIVAC 7


>sp|Y85A_METJA|PUTATIVE transposase MJ0856.1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 WCFECGCVA 9
+CF+CG A
Sbjct: 61 YCFDCGFYA 69


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 WCFECG 6
+CF+CG
Sbjct: 34 YCFQCG 39


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 116 WECGC 120


>sp|RS5_THEAC|SMALL ribosomal subunit protein uS5|Thermoplasma acidophilum (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 116 WECGC 120


>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 116 WECGC 120


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila (strain

Query: 3 FECGC 7
+ECGC
Sbjct: 121 WECGC 125


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 3 FECGC 7
+ECGC
Sbjct: 127 WECGC 131


>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 3 FECGC 7
+ECGC
Sbjct: 119 WECGC 123


>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 3 FECGC 7
+ECGC
Sbjct: 131 WECGC 135


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 3 FECGC 7
+ECGC
Sbjct: 131 WECGC 135


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 3 FECGC 7
+ECGC
Sbjct: 131 WECGC 135


>sp|RS5_METLZ|SMALL ribosomal subunit protein uS5|Methanocorpusculum labreanum (strain

Query: 3 FECGC 7
+ECGC
Sbjct: 119 WECGC 123


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 3 FECGC 7
+ECGC
Sbjct: 119 WECGC 123


>sp|RS5_METHJ|SMALL ribosomal subunit protein uS5|Methanospirillum hungatei JF-1

Query: 3 FECGC 7
+ECGC
Sbjct: 119 WECGC 123


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain DSM

Query: 3 FECGC 7
+ECGC
Sbjct: 120 WECGC 124


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 3 FECGC 7
+ECGC
Sbjct: 119 WECGC 123


>sp|RS5_METAR|SMALL ribosomal subunit protein uS5|Methanocella arvoryzae (strain DSM

Query: 3 FECGC 7
+ECGC
Sbjct: 123 WECGC 127


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 124 WECGC 128


>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 118 WECGC 122


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 118 WECGC 122


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 116 WECGC 120


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 WCFECG 6
+CF+CG
Sbjct: 34 YCFQCG 39


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 WCFECG 6
WC CG
Sbjct: 180 WCPRCG 185


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 3 FECGC 7
+ECGC
Sbjct: 127 WECGC 131


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 3 FECGC 7
+ECGC
Sbjct: 127 WECGC 131


>sp|RNP4_METKA|RIBONUCLEASE P protein component 4|Methanopyrus kandleri (strain AV19 /

Query: 2 CFECGCV 8
C ECG +
Sbjct: 96 CLECGYI 102


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WCFECGC 7
WC + GC
Sbjct: 435 WCGDEGC 441


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 3 FECGC 7
+ECGC
Sbjct: 121 WECGC 125


>sp|TF2B1_THEVO|TRANSCRIPTION initiation factor IIB 1|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CFECGCV 8
C ECG V
Sbjct: 35 CGECGAV 41


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 2 CFECGCV 8
C ECG V
Sbjct: 35 CGECGAV 41


>sp|ACDG2_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 CFECGCVAC 10
C ECG C
Sbjct: 18 CGECGQPTC 26


>sp|ACDG1_METMA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina mazei

Query: 2 CFECGCVAC 10
C ECG C
Sbjct: 18 CGECGQPTC 26


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 2 CFECGCV 8
C ECG V
Sbjct: 60 CSECGLV 66


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WCFECGCV 8
+C ECG V
Sbjct: 414 YCSECGRV 421


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 CFECGCVA 9
C ECG +A
Sbjct: 179 CEECGRIA 186


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus

Query: 2 CFECGCVAC 10
C ECG C
Sbjct: 18 CGECGFDTC 26


>sp|RNP4_METJA|RIBONUCLEASE P protein component 4|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CFECGCV 8
C ECG +
Sbjct: 92 CLECGAI 98


>sp|RPO10_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo10|Archaeoglobus fulgidus (strain ATCC

Query: 2 CFECGCV 8
CF CG V
Sbjct: 16 CFSCGAV 22


>sp|RNP4_PYRHO|RIBONUCLEASE P protein component 4|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CFECGCV 8
C ECG +
Sbjct: 97 CLECGYI 103


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 2 CFECGCVA 9
CF CG A
Sbjct: 371 CFGCGVCA 378


>sp|RPO10_METM6|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain C6

Query: 2 CFECGCV 8
CF CG V
Sbjct: 7 CFSCGAV 13


>sp|RPO10_METM7|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain C7

Query: 2 CFECGCV 8
CF CG V
Sbjct: 7 CFSCGAV 13


>sp|RPO10_METM5|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanococcus maripaludis (strain C5

Query: 2 CFECGCV 8
CF CG V
Sbjct: 7 CFSCGAV 13




66|SequenceR|335|326|EKMCLWCFEC

>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 EKMCLWCF 8
EK C WCF
Sbjct: 39 EKECPWCF 46


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 EKMCLWCF 8
E++C WC
Sbjct: 511 ERLCPWCL 518


>sp|MSRA_PICTO|PEPTIDE methionine sulfoxide reductase MsrA|Picrophilus torridus (strain

Query: 4 CLWCFE 9
C WC E
Sbjct: 11 CFWCME 16


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 4 CLWCFE 9
C WC E
Sbjct: 11 CFWCVE 16


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 4 CLWCFE 9
C WC E
Sbjct: 10 CFWCTE 15


>sp|MSRA_HALSA|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 4 CLWCFE 9
C WC E
Sbjct: 12 CFWCTE 17


>sp|MSRA_HALS3|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 4 CLWCFE 9
C WC E
Sbjct: 12 CFWCTE 17


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 4 CLWCFE 9
C WC E
Sbjct: 10 CFWCTE 15


>sp|FER2_SULTO|ZINC-CONTAINING ferredoxin-2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKMCLWCFEC 10
EK C++C C
Sbjct: 81 EKACIFCMAC 90


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 4 CLWCFE 9
C WC E
Sbjct: 11 CFWCTE 16


>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 1 EKMCLWCF 8
EK C+W F
Sbjct: 206 EKDCMWDF 213


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKMCLWCFE 9
EK+ +W FE
Sbjct: 217 EKLGIWFFE 225


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 MCLWCFEC 10
MC C+EC
Sbjct: 78 MCTTCYEC 85


>sp|Y750_METJA|UNCHARACTERIZED protein MJ0750|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKMCLWCFEC 10
+K C+ CFEC
Sbjct: 210 QKECIRCFEC 219


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 3 MCLWCFEC 10
MC C+EC
Sbjct: 76 MCTTCYEC 83


>sp|Y1621_METJA|UNCHARACTERIZED protein MJ1621|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EKMCLWCF 8
EK+CL+ F
Sbjct: 39 EKICLYSF 46


>sp|Y836_METJA|UNCHARACTERIZED protein MJ0836|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KMCLWCF 8
++CLWC+
Sbjct: 32 QVCLWCY 38


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 4 CLWCFEC 10
C +C+ C
Sbjct: 84 CFYCYSC 90


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 MCLWCFEC 10
MC C+ C
Sbjct: 78 MCTTCYSC 85


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 MCLWCFEC 10
MC C+ C
Sbjct: 78 MCTTCYSC 85




67|SequenceR|340|331|HLDSIEKMCL

>sp|PGK_NATPD|PHOSPHOGLYCERATE kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HLDSIEKMC 9
H+D++E++C
Sbjct: 39 HVDTVEELC 47


>sp|GLMM_METST|PROBABLE phosphoglucosamine mutase|Methanosphaera stadtmanae (strain ATCC

Query: 1 HLDSIEKM 8
HL+SIEK+
Sbjct: 436 HLNSIEKI 443


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HLDSIEKM 8
+LD+IEKM
Sbjct: 764 NLDTIEKM 771


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 HLDSIEKM 8
+LD+IEKM
Sbjct: 633 NLDTIEKM 640


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 HLDSIEKM 8
H++SIE+M
Sbjct: 169 HMESIEEM 176


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 2 LDSIEKMC 9
++SIEK+C
Sbjct: 52 INSIEKVC 59


>sp|APT_METVS|ADENINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 HLDSIEK 7
H DSIEK
Sbjct: 104 HSDSIEK 110


>sp|SYFB_METM6|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus maripaludis (strain C6 /

Query: 3 DSIEKMC 9
DS+EK C
Sbjct: 363 DSVEKKC 369


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 1 HLDSIEKM 8
HLD++EK+
Sbjct: 84 HLDAMEKL 91




68|SequenceR|345|336|SPSLYHLDSI

>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PSLYHLDSI 10
P LY++D+I
Sbjct: 475 PKLYYIDNI 483


>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 SPSLYHLDSI 10
+PSL HL++I
Sbjct: 239 NPSLSHLETI 248


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SPSLYHLDS 9
SPS++ LDS
Sbjct: 462 SPSIHDLDS 470


>sp|PSB_METKA|PROTEASOME subunit beta|Methanopyrus kandleri (strain AV19 /

Query: 2 PSLYHLD 8
P+LY+LD
Sbjct: 121 PALYNLD 127


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 SPSLYHLDSI 10
+PS+Y LD++
Sbjct: 96 APSVYVLDNV 105


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 SPSLYHLDS 9
+P+LY L+S
Sbjct: 423 TPTLYRLES 431


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PSLYHLDS 9
PSL HLD+
Sbjct: 193 PSLIHLDN 200


>sp|CIMA_METAC|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina acetivorans (strain

Query: 5 YHLDSI 10
YH+DSI
Sbjct: 429 YHVDSI 434


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 4 LYHLDSI 10
YH+DSI
Sbjct: 345 FYHVDSI 351


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 3 SLYHLDSI 10
+LYH+D +
Sbjct: 247 ALYHVDGV 254


>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 1 SPSLYHLD 8
SPS HLD
Sbjct: 182 SPSKMHLD 189




69|SequenceR|350|341|WFTCGSPSLY

>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 WFTCGSPSLY 10
W T G+P+ Y
Sbjct: 253 WITTGTPTAY 262


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 250 WLSTGTPTVY 259


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 WFTCGSPSLY 10
W T G+P+ Y
Sbjct: 254 WITMGTPTAY 263


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WFTCGSP 7
W TCG P
Sbjct: 330 WTTCGEP 336


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 WFTCGSPSLY 10
W T G P+ Y
Sbjct: 247 WITTGEPTAY 256


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 253 WLSQGTPTVY 262


>sp|SYA_THEAC|ALANINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 253 WLSQGTPTVY 262


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 265 WMSQGTPTVY 274


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 261 WMSQGTPTVY 270


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 261 WMSQGTPTVY 270


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 264 WMSQGTPTVY 273


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 1 WFTCGSPSL 9
+ TCG P L
Sbjct: 24 YLTCGHPGL 32


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 WFTCGSPSLY 10
W + G+P++Y
Sbjct: 263 WVSQGTPTVY 272


>sp|RPO10_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum arsenaticum (strain DSM

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGKP 13


>sp|RPO10_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum calidifontis (strain DSM

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGKP 13


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 FTCGSPSLY 10
F CG P L+
Sbjct: 227 FGCGHPMLF 235


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FTCGSPSLY 10
F CG P L+
Sbjct: 227 FGCGHPMLF 235


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 2 FTCGSPSLY 10
F CG P L+
Sbjct: 227 FGCGHPMLF 235


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 2 FTCGSPSLY 10
F CG P L+
Sbjct: 227 FGCGHPMLF 235


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 2 FTCGSPSLY 10
F CG P L+
Sbjct: 227 FGCGHPMLF 235


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FTCGSPSLY 10
F CG P L+
Sbjct: 223 FGCGHPMLF 231


>sp|RPO10_PYRIL|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum islandicum (strain DSM

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGKP 13


>sp|RPO10_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum aerophilum (strain ATCC

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGKP 13


>sp|RPO10_STAMF|DNA-DIRECTED RNA polymerase subunit Rpo10|Staphylothermus marinus (strain ATCC

Query: 2 FTCGSP 7
FTCG+P
Sbjct: 8 FTCGAP 13


>sp|ARCH_PYRNV|PROTEIN archease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 TCGSPSLY 10
TCG P+ Y
Sbjct: 2 TCGKPADY 9


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WFTCGSPSLY 10
W + G+P+ Y
Sbjct: 258 WMSQGTPTAY 267


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WFTCGSPSLY 10
W + G+P+ Y
Sbjct: 258 WMSQGTPTAY 267


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 WFTCGSPSLY 10
W + G+P+ Y
Sbjct: 258 WMSQGTPTAY 267


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 WFTCGSPSLY 10
WF+ G P Y
Sbjct: 260 WFSQGCPMSY 269


>sp|RPO10_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Hyperthermus butylicus (strain DSM

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGRP 13


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WFTCGSPSLY 10
W + G+P+ Y
Sbjct: 258 WMSHGTPTAY 267


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WFTCGSPSLY 10
W + G+P+ Y
Sbjct: 240 WISQGTPTAY 249


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 WFTCGSPSLY 10
W + G+P+ Y
Sbjct: 237 WISQGTPTAY 246


>sp|Y049_PYRAE|UNCHARACTERIZED serpin-like protein PAE0049|Pyrobaculum aerophilum (strain ATCC

Query: 3 TCGSPSL 9
+CG PSL
Sbjct: 196 SCGDPSL 202


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 CGSPSL 9
CG PSL
Sbjct: 199 CGDPSL 204


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 4 CGSPSLY 10
CGS S+Y
Sbjct: 127 CGSESIY 133


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 FTCGSPS 8
+ CG+PS
Sbjct: 1133 YVCGNPS 1139


>sp|SPEH_THEVO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 2 FTCGSP 7
+TCG P
Sbjct: 82 YTCGDP 87


>sp|SPEH_THEAC|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermoplasma acidophilum (strain ATCC

Query: 2 FTCGSP 7
+TCG P
Sbjct: 82 YTCGDP 87


>sp|RPO10_METKA|DNA-DIRECTED RNA polymerase subunit Rpo10|Methanopyrus kandleri (strain AV19 /

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGRP 13


>sp|RPO10_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo10|Pyrobaculum neutrophilum (strain DSM

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGRP 13


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 TCGSPSLY 10
+CG+ SLY
Sbjct: 665 SCGNVSLY 672


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 TCGSPSLY 10
+CG+ SLY
Sbjct: 665 SCGNVSLY 672


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 TCGSPSLY 10
+CG+ SLY
Sbjct: 665 SCGNVSLY 672


>sp|RPO10_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Aeropyrum pernix (strain ATCC 700893

Query: 2 FTCGSP 7
FTCG P
Sbjct: 8 FTCGRP 13




70|SequenceR|355|346|WPKKGWFTCG

>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WPKKGW-----FTCG 10
WP+KG+ +TCG
Sbjct: 70 WPEKGYAALDVYTCG 84


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 WPKKGW-----FTCG 10
WP+KG+ +TCG
Sbjct: 70 WPEKGYAALDVYTCG 84


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 1 WPKKGW-----FTCG 10
WP+KG+ +TCG
Sbjct: 70 WPEKGYAALDVYTCG 84


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WPKKGW-----FTCG 10
WP+KG+ +TCG
Sbjct: 70 WPEKGYAALDVYTCG 84


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 1 WPKKGW-----FTCG 10
WP+KG+ +TCG
Sbjct: 73 WPEKGYAALDVYTCG 87


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 1 WPKKGW-----FTCG 10
WP+KG+ +TCG
Sbjct: 73 WPEKGYAALDVYTCG 87


>sp|DPHB_METMJ|DIPHTHINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 WPKKGWF 7
+P KGWF
Sbjct: 137 FPAKGWF 143


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 WPKKGWFTCG 10
+PK W CG
Sbjct: 488 YPKMQWVPCG 497


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PKKGWF 7
PKKGW
Sbjct: 318 PKKGWL 323


>sp|HIS4_METLZ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanocorpusculum labreanum

Query: 4 KGWFTCG 10
+GW CG
Sbjct: 89 RGWLNCG 95


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PKKGWF 7
PKKGW
Sbjct: 318 PKKGWL 323


>sp|RS3A_NANEQ|SMALL ribosomal subunit protein eS1|Nanoarchaeum equitans (strain

Query: 1 WPKKGWFT 8
W +K WFT
Sbjct: 10 WKRKIWFT 17


>sp|RS3A_METS3|SMALL ribosomal subunit protein eS1|Methanobrevibacter smithii (strain

Query: 1 WPKKGWFT 8
W +K W+T
Sbjct: 14 WKEKSWYT 21


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 1 WPKKGW 6
W +KGW
Sbjct: 84 WKRKGW 89


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 PKKGWF 7
PK GWF
Sbjct: 507 PKAGWF 512


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PKKGWF 7
PK GWF
Sbjct: 507 PKAGWF 512


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PKKGWF 7
PK GWF
Sbjct: 503 PKAGWF 508


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PKKGWF 7
PK GWF
Sbjct: 507 PKAGWF 512


>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KKGWFTCG 10
KKGW T G
Sbjct: 34 KKGWTTLG 41


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 3 KKGWFTCG 10
KKGW T G
Sbjct: 34 KKGWTTLG 41


>sp|SRP19_METMP|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain DSM

Query: 1 WPKKGWFTCG 10
+PK+ W CG
Sbjct: 56 YPKESWEICG 65


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain

Query: 1 WPKKGWF 7
WP + WF
Sbjct: 32 WPTQSWF 38


>sp|ENDAL_METKA|ENDA-LIKE protein|Methanopyrus kandleri (strain AV19 /

Query: 1 WPKKGWFTC 9
WP++ F C
Sbjct: 39 WPEEALFLC 47


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGKWKT 105


>sp|RS3A_PICTO|SMALL ribosomal subunit protein eS1|Picrophilus torridus (strain ATCC

Query: 1 WPKKGWFT 8
W +K W+T
Sbjct: 13 WKEKTWYT 20


>sp|DPHB_THEON|DIPHTHINE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 WPKKGWF 7
+P+K WF
Sbjct: 138 YPEKNWF 144


>sp|DPHB_THEKO|DIPHTHINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WPKKGWF 7
+P+K WF
Sbjct: 138 YPEKNWF 144


>sp|DPHB_PYRAB|DIPHTHINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 WPKKGWF 7
+P+K WF
Sbjct: 138 YPEKNWF 144


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 1 WPKKGWFT 8
WPK W T
Sbjct: 98 WPKGEWET 105


>sp|DPHB_METPE|DIPHTHINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 WPKKGWF 7
+P+K WF
Sbjct: 137 FPQKNWF 143


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KKGWFTCG 10
K+GW T G
Sbjct: 34 KRGWTTLG 41


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KKGWFT 8
KKGW++
Sbjct: 300 KKGWYS 305


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 KKGWFT 8
KKGW++
Sbjct: 304 KKGWYS 309


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PKKGWFTCG 10
PKK +FT G
Sbjct: 7 PKKVFFTSG 15


>sp|SRP19_METVS|SIGNAL recognition particle 19 kDa|Methanococcus vannielii (strain ATCC

Query: 1 WPKKGWFTCG 10
+PK+ W CG
Sbjct: 56 YPKEPWEICG 65


>sp|PDAD1_METMA|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Methanosarcina mazei (strain ATCC

Query: 2 PKKGWFTCG 10
PKK +FT G
Sbjct: 7 PKKVFFTSG 15


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 3 KKGWF 7
+KGWF
Sbjct: 72 RKGWF 76


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 3 KKGWF 7
K+GWF
Sbjct: 192 KRGWF 196


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KKGWF 7
K+GWF
Sbjct: 192 KRGWF 196


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 PKKGW 6
P+KGW
Sbjct: 265 PEKGW 269


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WPKKGW 6
W ++GW
Sbjct: 149 WKREGW 154


>sp|PSA_PYRAE|PROTEASOME subunit alpha|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 KKGWFTCG 10
K+GW T G
Sbjct: 33 KRGWPTVG 40


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KGWFTCG 10
K W TCG
Sbjct: 328 KNWTTCG 334


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PKKGWF 7
PKK WF
Sbjct: 352 PKKQWF 357


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 PKKGWF 7
PKK WF
Sbjct: 352 PKKQWF 357


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PKKGWF 7
PKK WF
Sbjct: 352 PKKQWF 357


>sp|SRP19_METM6|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C6

Query: 1 WPKKGWFTCG 10
+P++ W CG
Sbjct: 56 YPREPWEICG 65


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PKKGWF 7
PKK WF
Sbjct: 352 PKKQWF 357


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 1 WPKKGWFTCG 10
+PK W CG
Sbjct: 56 YPKDPWEICG 65


>sp|SRP19_METJA|SIGNAL recognition particle 19 kDa|Methanocaldococcus jannaschii (strain

Query: 1 WPKKGWFTCG 10
+P++ W CG
Sbjct: 53 YPRQHWEICG 62


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WPKKGW 6
+PK GW
Sbjct: 38 YPKPGW 43


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WPKKGW 6
+PK GW
Sbjct: 38 YPKPGW 43


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 WPKKGW 6
+PK GW
Sbjct: 38 YPKPGW 43




71|SequenceR|360|351|KKKRSWPKKG

>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 KRSWPKK 9
K+ WPK+
Sbjct: 686 KQEWPKR 692


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 5 SWPKKG 10
+WP+KG
Sbjct: 72 TWPEKG 77


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KKRSWPKK 9
K+R WP K
Sbjct: 107 KRRGWPLK 114


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 SWPKKG 10
+WP+KG
Sbjct: 69 TWPEKG 74


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 5 SWPKKG 10
+WP+KG
Sbjct: 72 TWPEKG 77


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 5 SWPKKG 10
+WP+KG
Sbjct: 69 TWPEKG 74


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 KKKRSWPKK 9
+KK +W KK
Sbjct: 170 RKKENWLKK 178


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 5 SWPKKG 10
+WP+KG
Sbjct: 69 TWPEKG 74


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 RSWPKKG 10
RSW KKG
Sbjct: 392 RSWEKKG 398


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 6 WPKKG 10
WP+KG
Sbjct: 466 WPEKG 470


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 4 RSWPKK 9
RSWPK+
Sbjct: 28 RSWPKE 33


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 4 RSWPKK 9
RSWPK+
Sbjct: 28 RSWPKE 33


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 5 SWPKKG 10
+WP+KG
Sbjct: 69 TWPEKG 74


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 4 RSWPKK 9
RSWPK+
Sbjct: 28 RSWPKE 33


>sp|IF1A2_METBF|TRANSLATION initiation factor 1A 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KKKRSWPKKG 10
KKKR W ++G
Sbjct: 70 KKKRMWIREG 79




72|SequenceR|365|356|LQWLIKKKRS

>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 1 LQWLIKKKR 9
L+WL K+K+
Sbjct: 240 LEWLTKRKK 248


>sp|RADB_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LQWLIKKK 8
LQWL +KK
Sbjct: 137 LQWLARKK 144


>sp|APAUH_THEKO|N(1)-AMINOPROPYLAGMATINE ureohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LQWLIKKK 8
++WL++KK
Sbjct: 242 IEWLVEKK 249


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LQWLIK 6
L+WLIK
Sbjct: 23 LEWLIK 28


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 LQWLIKKKR 9
+QW I+K R
Sbjct: 152 IQWQIRKLR 160




73|SequenceR|370|361|GVLTGLQWLI

>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GVLTGLQW 8
GV+TGL W
Sbjct: 629 GVVTGLAW 636


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVLTGLQW 8
GV+TGL W
Sbjct: 604 GVVTGLAW 611


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VLTGLQWL 9
+L+GLQW+
Sbjct: 1803 ILSGLQWI 1810


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 GVLTGLQWLI 10
V+TG WL+
Sbjct: 144 AVITGKTWLV 153


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 1 GVLTGLQW 8
G LTG++W
Sbjct: 201 GALTGIEW 208


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 2 VLTGLQWLI 10
VL+G +WL+
Sbjct: 231 VLSGKRWLL 239


>sp|RL21_PICTO|LARGE ribosomal subunit protein eL21|Picrophilus torridus (strain ATCC

Query: 1 GVLTGLQ 7
GV+TG+Q
Sbjct: 63 GVITGMQ 69


>sp|KTHY_AERPE|PUTATIVE thymidylate kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVLTGLQWL 9
GV +GL+W+
Sbjct: 103 GVGSGLEWV 111


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVLTGLQWL 9
GVLT L WL
Sbjct: 402 GVLTPLGWL 410




74|SequenceR|375|366|IGVPAGVLTG

>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 1 IGVPAGVL 8
+GVP G+L
Sbjct: 140 VGVPCGIL 147


>sp|GAL1_PYRHO|GALACTOKINASE horikoshii (strain ATCC 700860

Query: 1 IGVPAGVL 8
+GVP G+L
Sbjct: 141 VGVPCGIL 148


>sp|SECY_METTH|PROTEIN translocase subunit SecY|Methanothermobacter thermautotrophicus

Query: 2 GVPAGVLTG 10
GVPAG +TG
Sbjct: 201 GVPAGRITG 209


>sp|GAL1_PYRFU|GALACTOKINASE furiosus (strain ATCC 43587

Query: 1 IGVPAGVL 8
+GVP G+L
Sbjct: 143 VGVPCGIL 150


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PAGVLTG 10
PAG LTG
Sbjct: 341 PAGTLTG 347


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GVPAGVLT 9
G+PAG+LT
Sbjct: 218 GMPAGILT 225


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGVPAGVL 8
IG+PAG+
Sbjct: 514 IGIPAGIF 521


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 2 GVPAGVLTG 10
GVP V+TG
Sbjct: 195 GVPDDVITG 203


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 2 GVPAGVL 8
GVP GVL
Sbjct: 102 GVPPGVL 108


>sp|IF6_METMA|TRANSLATION initiation factor 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GVPAGVL 8
GVPAG+L
Sbjct: 84 GVPAGIL 90


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GVPAGVL 8
GVP GVL
Sbjct: 192 GVPKGVL 198


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PAGVLTG 10
P GVLTG
Sbjct: 826 PVGVLTG 832


>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 2 GVPAGVL 8
GVP GVL
Sbjct: 203 GVPEGVL 209


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 4 PAGVLTG 10
PAG LTG
Sbjct: 420 PAGTLTG 426


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 GVPAGV 7
GVPAGV
Sbjct: 29 GVPAGV 34


>sp|RS19_META3|SMALL ribosomal subunit protein uS19|Methanococcus aeolicus (strain ATCC

Query: 1 IGVPAGVLTG 10
IG+P G+ G
Sbjct: 107 IGLPFGIYNG 116


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 2 GVPAGVLTG 10
G P G +TG
Sbjct: 273 GFPIGAITG 281


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 2 GVPAGVLTG 10
G P G +TG
Sbjct: 273 GFPIGAITG 281


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 2 GVPAGVLTG 10
G P G +TG
Sbjct: 273 GFPIGAITG 281


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GVPAGV 7
GVPAGV
Sbjct: 29 GVPAGV 34


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GVPAGVLTG 10
G P G +TG
Sbjct: 273 GFPIGAITG 281




75|SequenceR|380|371|GAILAIGVPA

>sp|VORA_METTH|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter thermautotrophicus

Query: 1 GAILAIGVPA 10
GA+ A+GVPA
Sbjct: 397 GAVRAMGVPA 406


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GAILAIGVP 9
GA+ +IG+P
Sbjct: 384 GALYSIGIP 392


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 GAILAIGVP 9
GA+ +IG+P
Sbjct: 383 GALYSIGIP 391


>sp|Y321_METJA|UNCHARACTERIZED protein MJ0321|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ILAIGVP 9
+LA+GVP
Sbjct: 30 VLAVGVP 36


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GAILAIGVP 9
GA+ +IG+P
Sbjct: 392 GALYSIGLP 400


>sp|FKBPS_METJA|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanocaldococcus jannaschii

Query: 3 ILAIGVPA 10
ILA G+PA
Sbjct: 112 ILASGIPA 119


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GAILAIGVP 9
GA+ +IG+P
Sbjct: 392 GALYSIGLP 400


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAILAIGVP 9
GA+ +IG+P
Sbjct: 392 GALYSIGLP 400


>sp|MTRF_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit F|Methanothermobacter

Query: 2 AILAIGVPA 10
A+L +GVPA
Sbjct: 52 AVLLVGVPA 60


>sp|MTRF_METTM|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit F|Methanothermobacter marburgensis

Query: 2 AILAIGVPA 10
A+L +GVPA
Sbjct: 52 AVLLVGVPA 60




76|SequenceR|385|376|APIAIGAILA

>sp|Y1571_PYRHO|PUTATIVE transport protein PH1571|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PIAIGAILA 10
PIAIG +LA
Sbjct: 311 PIAIGLLLA 319


>sp|RL2_PYRAB|LARGE ribosomal subunit protein uL2|Pyrococcus abyssi (strain GE5 /

Query: 1 APIAIGAIL 9
APIAIG L
Sbjct: 89 APIAIGNTL 97


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 PIAIGAI 8
PIA+GA+
Sbjct: 207 PIAVGAL 213


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PIAIGAI 8
PIA+GA+
Sbjct: 207 PIAVGAL 213




77|SequenceR|390|381|IGIIMAPIAI

>sp|AATI_METTH|A-TYPE ATP synthase subunit I|Methanothermobacter thermautotrophicus

Query: 1 IGIIMAPI 8
IG+++API
Sbjct: 596 IGVVLAPI 603




78|SequenceR|395|386|GVYVPIGIIM

>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 1 GVYVPIG 7
G+Y+PIG
Sbjct: 264 GIYLPIG 270


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVYVPIGII 9
+Y PIG+I
Sbjct: 510 AIYTPIGLI 518


>sp|AATB_IGNH4|A-TYPE ATP synthase subunit B|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 343 GIYPPINVLM 352


>sp|AATB_HYPBU|A-TYPE ATP synthase subunit B|Hyperthermus butylicus (strain DSM 5456

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 345 GIYPPINVLM 354


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 341 GIYPPINVLM 350


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 1 GVYVPIGIIM 10
GVY P+ I+M
Sbjct: 341 GVYPPVNILM 350


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 339 GIYPPINVLM 348


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VYVPIGII 9
+Y PIG++
Sbjct: 513 IYTPIGLV 520


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 GVYVPIGIIM 10
GVY P+ I+M
Sbjct: 341 GVYPPVNILM 350


>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VYVPIGII 9
V VPIG+I
Sbjct: 122 VTVPIGVI 129


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC 43049

Query: 2 VYVPIGII 9
V VPIGII
Sbjct: 189 VDVPIGII 196


>sp|PROA_NATPD|GAMMA-GLUTAMYL phosphate reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VYVPIGII 9
V VPIG+I
Sbjct: 115 VSVPIGVI 122


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GVYVPIG 7
GVY P+G
Sbjct: 483 GVYTPLG 489


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 342 GIYPPINVLM 351


>sp|AATB_AERPE|A-TYPE ATP synthase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 1 GVYVPIGIIM 10
G+Y PI ++M
Sbjct: 340 GIYPPINVLM 349


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 1 GVYVPIG 7
G YVPIG
Sbjct: 363 GKYVPIG 369


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 27 GVYLPYG 33


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 27 GVYLPYG 33


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 27 GVYLPYG 33


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 27 GVYLPYG 33


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 28 GVYLPYG 34


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 27 GVYLPYG 33


>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GVYVPIGIIM 10
G+Y P +IM
Sbjct: 340 GIYPPFDVIM 349


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GVYVPIGIIM 10
G+Y P +IM
Sbjct: 340 GIYPPFDVIM 349


>sp|SYP_METJA|PROLINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVYVPIG 7
GVY+P G
Sbjct: 27 GVYLPYG 33


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 1 GVYVPIGII 9
GV+V IG+I
Sbjct: 154 GVFVDIGVI 162


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GVYVPIGIIM 10
G+Y P +IM
Sbjct: 340 GIYPPFDVIM 349


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GVYVPIGIIM 10
G+Y P +IM
Sbjct: 340 GIYPPFDVIM 349


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GVYVPIGIIM 10
G+Y P +IM
Sbjct: 340 GIYPPFDVIM 349




79|SequenceR|400|391|NHIKRGVYVP

>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NHIKRGVYVP 10
N+I RG+ VP
Sbjct: 100 NYISRGIMVP 109


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NHIKRGVYV 9
+HIK G+Y+
Sbjct: 30 DHIKNGIYI 38


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 RGVYVP 10
RGVYVP
Sbjct: 74 RGVYVP 79


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NHIKRGVYV 9
N IK GVY+
Sbjct: 304 NEIKHGVYL 312


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NHIKRGVYV 9
N IK GVY+
Sbjct: 304 NEIKHGVYL 312


>sp|DPOL_METVO|DNA polymerase|Methanococcus voltae

Query: 2 HIKRGVYV 9
H KRG++V
Sbjct: 642 HFKRGLFV 649


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NHIKRGVYV 9
N IK G+Y+
Sbjct: 304 NEIKHGIYL 312


>sp|GSA_SULAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 IKRGVYVP 10
++RGV++P
Sbjct: 381 LQRGVFIP 388


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 IKRGVYVP 10
++RGV++P
Sbjct: 379 LERGVFIP 386


>sp|Y2010_ARCFU|UNCHARACTERIZED protein AF_2010|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NHIKRGVYVP 10
+H++ GV+ P
Sbjct: 170 SHLRSGVFTP 179


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 1 NHIKRGVYVP 10
+HI+ YVP
Sbjct: 104 DHIENDFYVP 113


>sp|GSA_THEVO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KRGVYVP 10
K GVY+P
Sbjct: 381 KNGVYLP 387


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NHIKRGVYVP 10
+H+ G Y+P
Sbjct: 144 DHVNPGWYIP 153


>sp|GYAR_PYRAB|GLYOXYLATE reductase|Pyrococcus abyssi (strain GE5 /

Query: 4 KRGVYV 9
KRG+YV
Sbjct: 89 KRGIYV 94


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NHIKRGVYVP 10
+H+ G Y+P
Sbjct: 137 DHVNPGWYIP 146


>sp|GSA_METS5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Metallosphaera sedula (strain ATCC 51363

Query: 3 IKRGVYVP 10
+K GV++P
Sbjct: 377 LKEGVFIP 384


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 IKRGVYVP 10
+K GV++P
Sbjct: 379 LKEGVFIP 386


>sp|GYAR_THEPD|GLYOXYLATE reductase|Thermofilum pendens (strain DSM 2475

Query: 4 KRGVYV 9
KRG+YV
Sbjct: 90 KRGIYV 95


>sp|GYAR_THELN|GLYOXYLATE reductase|Thermococcus litoralis (strain ATCC 51850

Query: 4 KRGVYV 9
KRG+YV
Sbjct: 88 KRGIYV 93


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KRGVYV 9
KRG+YV
Sbjct: 88 KRGIYV 93


>sp|GSA_SACS2|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IKRGVYVP 10
+K GV++P
Sbjct: 378 LKEGVFIP 385


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 KRGVYV 9
KRG+YV
Sbjct: 88 KRGIYV 93




80|SequenceR|405|396|KGEYRNHIKR

>sp|SURE_THEPD|5'-NUCLEOTIDASE SurE|Thermofilum pendens (strain DSM 2475

Query: 1 KGEYRNHIKR 10
+GEYRN + R
Sbjct: 137 EGEYRNFVLR 146


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 3 EYRNHIKR 10
E+RN++KR
Sbjct: 457 EWRNNLKR 464


>sp|CYDE_METM6|L-CYSTEINE desulfidase|Methanococcus maripaludis (strain C6 /

Query: 1 KGEYRN 6
KGEY+N
Sbjct: 161 KGEYKN 166


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGEYRNHIKR 10
KG YR +KR
Sbjct: 78 KGRYRMRVKR 87


>sp|NOP10_HALMA|RIBOSOME biogenesis protein Nop10|Haloarcula marismortui (strain ATCC

Query: 2 GEYRNHIKR 10
GEYR +KR
Sbjct: 48 GEYRRSLKR 56


>sp|NOP10_THEON|RIBOSOME biogenesis protein Nop10|Thermococcus onnurineus (strain NA1)

Query: 2 GEYRNHIKR 10
GEYR +KR
Sbjct: 42 GEYRRRLKR 50


>sp|NOP10_PYRAB|RIBOSOME biogenesis protein Nop10|Pyrococcus abyssi (strain GE5 /

Query: 2 GEYRNHIKR 10
GEYR +KR
Sbjct: 42 GEYRRRLKR 50


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGEYRNHIKR 10
KGE+RN R
Sbjct: 293 KGEWRNEAPR 302


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 GEYRNHIK 9
G YR+HI+
Sbjct: 69 GTYRSHIQ 76


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 GEYRNHIK 9
G YR+HI+
Sbjct: 69 GTYRSHIQ 76


>sp|NOP10_THEKO|RIBOSOME biogenesis protein Nop10|Thermococcus kodakarensis (strain ATCC

Query: 2 GEYRNHIKR 10
GEYR +KR
Sbjct: 42 GEYRRRLKR 50


>sp|RL6_METVS|LARGE ribosomal subunit protein uL6|Methanococcus vannielii (strain

Query: 2 GEYRNHIK 9
G YR+HI+
Sbjct: 69 GTYRSHIQ 76


>sp|RL6_METVA|LARGE ribosomal subunit protein uL6|Methanococcus vannielii

Query: 2 GEYRNHIK 9
G YR+HI+
Sbjct: 69 GTYRSHIQ 76


>sp|COBQ_META3|PROBABLE cobyric acid synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EYRNHI 8
E+RNHI
Sbjct: 443 EFRNHI 448


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 GEYRNHIK 9
G YR+HI+
Sbjct: 69 GTYRSHIQ 76


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 2 GEYRNHIK 9
G YR+HI+
Sbjct: 69 GTYRSHIQ 76


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 KGEYRNHIK 9
+G YR HI+
Sbjct: 113 EGRYREHIQ 121


>sp|NDK_METPE|NUCLEOSIDE diphosphate kinase|Methanosphaerula palustris (strain ATCC

Query: 4 YRNHIKR 10
YR HI+R
Sbjct: 49 YREHIER 55


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 RNHIKR 10
RNH+KR
Sbjct: 113 RNHLKR 118




81|SequenceR|410|401|HKSVDKGEYR

>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 3 SVDKGEY 9
SVD GEY
Sbjct: 366 SVDAGEY 372


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 KSVDKGEYR 10
KSVDK E R
Sbjct: 649 KSVDKAENR 657


>sp|PROA_HALWD|GAMMA-GLUTAMYL phosphate reductase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KSVDKGEY 9
K VD GEY
Sbjct: 65 KQVDAGEY 72


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 HKSVDKGEYR 10
H SV + EYR
Sbjct: 458 HDSVPEAEYR 467


>sp|FAU1_IGNH4|PROBABLE ribonuclease FAU-1|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HKSVDKGEY 9
HK VD EY
Sbjct: 317 HKKVDGAEY 325


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 HKSVDKGEYR 10
K +DK +YR
Sbjct: 166 QKKIDKTDYR 175


>sp|RL11_SULTO|LARGE ribosomal subunit protein uL11|Sulfurisphaera tokodaii (strain DSM

Query: 2 KSVDKGEY 9
K+VD+G+Y
Sbjct: 147 KAVDEGKY 154




82|SequenceR|415|406|ALNRKHKSVD

>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ALNRKH 6
ALNRKH
Sbjct: 401 ALNRKH 406




83|SequenceR|420|411|VGGAIALNRK

>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 VGGAIALN 8
VGG+IALN
Sbjct: 233 VGGSIALN 240


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGAIALNRK 10
GAI +NRK
Sbjct: 286 AGAIKVNRK 294


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 GGAIALNRK 10
GG IA NR+
Sbjct: 178 GGGIAYNRE 186


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VGGAIALNRK 10
+ G +ALNR+
Sbjct: 250 MAGGVALNRR 259




84|SequenceR|425|416|IVSLTVGGAI

>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 2 VSLTVGGAI 10
V++T+GGAI
Sbjct: 69 VAITLGGAI 77


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 75 IPLTVGGGI 83


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VSLTVGGAI 10
+SL +GGAI
Sbjct: 81 ISLVIGGAI 89


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVSLTVGG 8
+VSL +GG
Sbjct: 74 VVSLAIGG 81


>sp|HIS6_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 81 IPLTVGGGI 89


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 75 IPLTVGGGI 83


>sp|PCNA1_SULAC|DNA polymerase sliding clamp 1|Sulfolobus acidocaldarius (strain ATCC

Query: 2 VSLTVGGAI 10
V +T+GGA+
Sbjct: 97 VKITLGGAL 105


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 75 IPLTVGGGI 83


>sp|RL30_META3|LARGE ribosomal subunit protein uL30|Methanococcus aeolicus (strain ATCC

Query: 3 SLTVGGAI 10
S TVGGA+
Sbjct: 132 SFTVGGAL 139


>sp|HIS6_HALSA|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 81 IPLTVGGGI 89


>sp|HIS6_HALS3|IMIDAZOLE glycerol phosphate synthase subunit|Halobacterium salinarum

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 81 IPLTVGGGI 89


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 VSLTVGGAI 10
+ LTVGG I
Sbjct: 75 IPLTVGGGI 83




85|SequenceR|430|421|VVPSVIVSLT

>sp|CEDA_SULAC|DNA import protein CedA|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VVPSVIVSL 9
VVPS+I SL
Sbjct: 216 VVPSIITSL 224




86|SequenceR|435|426|VTVAAVVPSV

>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VTVAAVVP 8
VT+A VVP
Sbjct: 194 VTIARVVP 201




87|SequenceR|440|431|PVGIGVTVAA

>sp|ENO_PYRAE|ENOLASE aerophilum (strain ATCC 51768

Query: 2 VGIGVTVAA 10
VGIGV VAA
Sbjct: 235 VGIGVDVAA 243


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 VGIGVTVA 9
+GIG+T+A
Sbjct: 197 IGIGLTIA 204


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 VGIGVTVA 9
VGIGVT++
Sbjct: 223 VGIGVTIS 230


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VGIGVTVA 9
+GIG+T+A
Sbjct: 197 IGIGLTIA 204


>sp|FLAX_SULAC|ARCHAEAL flagellar motor scaffold protein|Sulfolobus acidocaldarius

Query: 2 VGIGVTVAA 10
+G+G+ +AA
Sbjct: 16 IGVGIPIAA 24


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 1 PVGIGVTVAA 10
P G G TVAA
Sbjct: 267 PPGSGKTVAA 276




88|SequenceR|445|436|YALMIPVGIG

>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YALMIPVG 8
YAL+IP+G
Sbjct: 169 YALLIPLG 176


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 ALMIPVGIG 10
AL +PVG+G
Sbjct: 223 ALNVPVGVG 231


>sp|AROC_METJA|CHORISMATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ALMIPVGIG 10
AL +PVG+G
Sbjct: 228 ALNVPVGVG 236


>sp|PFDA_METMA|PREFOLDIN subunit alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 MIPVGIG 10
M+PVG G
Sbjct: 62 MVPVGFG 68


>sp|PFDA_METBF|PREFOLDIN subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 4 MIPVGIG 10
M+PVG G
Sbjct: 63 MVPVGFG 69


>sp|PFDA_METAC|PREFOLDIN subunit alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 MIPVGIG 10
M+PVG G
Sbjct: 62 MVPVGFG 68


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YALMIPVGIG 10
+++++P G+G
Sbjct: 96 FSIVVPTGVG 105


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YALMIPVGIG 10
YA++IP IG
Sbjct: 157 YAVLIPKPIG 166


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YALMIPVGIG 10
YA++IP IG
Sbjct: 155 YAVLIPKPIG 164


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 YALMIPVGIG 10
YA++IP IG
Sbjct: 155 YAVLIPKPIG 164


>sp|PFDA_METAR|PREFOLDIN subunit alpha|Methanocella arvoryzae (strain DSM 22066

Query: 1 YALMIPVGIG 10
+ L++P+G G
Sbjct: 58 HELLVPIGAG 67


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 5 IPVGIG 10
IPVG+G
Sbjct: 287 IPVGVG 292


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YALMIPVGIG 10
YA++IP IG
Sbjct: 155 YAVLIPKPIG 164


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YALMIPVGI 9
Y LM+ +GI
Sbjct: 366 YKLMVEIGI 374


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YALMIPVGI 9
Y LM+ +GI
Sbjct: 366 YKLMVEIGI 374


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YALMIPVGI 9
Y LM+ +GI
Sbjct: 366 YKLMVEIGI 374


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 YALMIPVGI 9
Y LM+ +GI
Sbjct: 366 YKLMVEIGI 374


>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YALMIPVGI 9
Y LM+ +GI
Sbjct: 366 YKLMVEIGI 374


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 ALMIPVGIG 10
A +IP+G+G
Sbjct: 918 ATLIPIGLG 926


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YALMIPVGIG 10
YA++IP +G
Sbjct: 157 YAVLIPKPVG 166


>sp|PFDA1_THEKO|PREFOLDIN subunit alpha 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 YALMIPVGIG 10
+ +++P+G G
Sbjct: 56 FEILVPIGAG 65


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 YALMIPVGI 9
+ +MIP+GI
Sbjct: 147 HKIMIPLGI 155


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 YALMIPVGIG 10
+ ++IPVGI
Sbjct: 147 HKILIPVGIN 156


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 1 YALMIPVGIG 10
YAL I GIG
Sbjct: 164 YALAIAKGIG 173


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YALMIPVGIG 10
YAL I GIG
Sbjct: 164 YALAIAKGIG 173


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 1 YALMIPVGIG 10
YAL I GIG
Sbjct: 164 YALAIAKGIG 173


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 1 YALMIPVGIG 10
YAL I GIG
Sbjct: 164 YALAIAKGIG 173




89|SequenceR|450|441|VVGYVYALMI

>sp|COXX_PYRNV|PROTOHEME IX farnesyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VVGYVYA 7
VVGYVYA
Sbjct: 21 VVGYVYA 27


>sp|SYDND_METBF|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VVGYVYALMI 10
+V YVYA +I
Sbjct: 255 LVAYVYAQVI 264


>sp|COXX_PYRIL|PROTOHEME IX farnesyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VVGYVYA 7
VVGY+YA
Sbjct: 21 VVGYIYA 27


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 3 GYVYALM 9
GYVY L+
Sbjct: 297 GYVYGLL 303


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 GYVYALMI 10
GY Y LM+
Sbjct: 354 GYTYILML 361




90|SequenceR|455|446|CLSIPVVGYV

>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 LSIPVVGY 9
L +PVVGY
Sbjct: 294 LPVPVVGY 301


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LSIPVVG 8
LSIPVVG
Sbjct: 519 LSIPVVG 525


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LSIPVVG 8
LSIPVVG
Sbjct: 505 LSIPVVG 511


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LSIPVVG 8
LSIPVVG
Sbjct: 505 LSIPVVG 511


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 2 LSIPVVG 8
LSIPVVG
Sbjct: 506 LSIPVVG 512


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 4 IPVVGY 9
IPVVGY
Sbjct: 426 IPVVGY 431


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PVVGYV 10
PVVGYV
Sbjct: 256 PVVGYV 261


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 2 LSIPVVGYV 10
+S PVVGYV
Sbjct: 225 MSKPVVGYV 233


>sp|SPEE_THEON|POLYAMINE aminopropyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 LSIPVVGY 9
S PV+GY
Sbjct: 221 FSFPVIGY 228


>sp|SPEE_THEKO|POLYAMINE aminopropyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 LSIPVVGY 9
S PV+GY
Sbjct: 227 FSFPVIGY 234


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LSIPVVGY 9
+ IP+VGY
Sbjct: 333 MGIPLVGY 340


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 LSIPVVGY 9
L +P+VGY
Sbjct: 299 LPVPLVGY 306


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 LSIPVVGY 9
L +P+VGY
Sbjct: 299 LPVPLVGY 306


>sp|SPEE_PYRHO|POLYAMINE aminopropyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SIPVVGY 9
S PV+GY
Sbjct: 223 SFPVIGY 229


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SIPVVGY 9
S PV+GY
Sbjct: 221 SFPVIGY 227


>sp|SPEE_PYRAB|POLYAMINE aminopropyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 SIPVVGY 9
S PV+GY
Sbjct: 220 SFPVIGY 226


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CLSIPVVGYV 10
CL + V GYV
Sbjct: 148 CLGVVVSGYV 157


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 CLSIPVVG 8
CL +P+VG
Sbjct: 220 CLFVPLVG 227


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CLSIPVVG 8
C+ +P VG
Sbjct: 161 CIGVPTVG 168


>sp|UVRB_METMP|UVRABC system protein B|Methanococcus maripaludis (strain DSM 14266

Query: 2 LSIPVVGYV 10
L IP VG+V
Sbjct: 507 LDIPEVGFV 515


>sp|AATC_METS3|A-TYPE ATP synthase subunit C|Methanobrevibacter smithii (strain ATCC

Query: 5 PVVGYV 10
P++GYV
Sbjct: 347 PIIGYV 352


>sp|TRUD_NANEQ|PROBABLE tRNA pseudouridine synthase D|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LSIPVVGY 9
+ IP++GY
Sbjct: 288 IEIPLIGY 295


>sp|AATC_METTP|A-TYPE ATP synthase subunit C|Methanothrix thermoacetophila (strain DSM

Query: 4 IPVVGYV 10
+PV+GY+
Sbjct: 310 LPVLGYI 316


>sp|TRUD_THEVO|PROBABLE tRNA pseudouridine synthase D|Thermoplasma volcanium (strain ATCC

Query: 2 LSIPVVGY 9
+S+P+ GY
Sbjct: 312 ISLPIFGY 319


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LSIPVVGY 9
L +P+ GY
Sbjct: 243 LEVPIAGY 250


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSIPVVGYV 10
+SIP+VG +
Sbjct: 615 ISIPIVGAI 623


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 2 LSIPVVGY 9
+ +PV+GY
Sbjct: 352 VRVPVIGY 359


>sp|Y1527_METJA|UPF0132 membrane protein MJ1527|Methanocaldococcus jannaschii (strain

Query: 3 SIPVVGYV 10
+IP++G+V
Sbjct: 89 AIPIIGWV 96


>sp|SUCD_METJA|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Methanocaldococcus jannaschii

Query: 5 PVVGYV 10
PV+GY+
Sbjct: 233 PVIGYI 238


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 2 LSIPVVGYV 10
L IP++G V
Sbjct: 202 LEIPIIGIV 210




91|SequenceR|460|451|CGGSRCLSIP

>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CGGSRCLS 8
CGG+ CLS
Sbjct: 714 CGGTHCLS 721


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGSRCLSIP 10
GG CLS+P
Sbjct: 257 GGVTCLSLP 265


>sp|IF5A_PYRNV|TRANSLATION initiation factor 5A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GGSRCLSIP 10
GG R LS+P
Sbjct: 52 GGKRTLSLP 60


>sp|IF5A_PYRIL|TRANSLATION initiation factor 5A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GGSRCLSIP 10
GG R LS+P
Sbjct: 52 GGKRTLSLP 60


>sp|IF5A_PYRAR|TRANSLATION initiation factor 5A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GGSRCLSIP 10
GG R LS+P
Sbjct: 52 GGKRTLSLP 60


>sp|IF5A_PYRAE|TRANSLATION initiation factor 5A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GGSRCLSIP 10
GG R LS+P
Sbjct: 58 GGKRTLSLP 66


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CGGSRCLS 8
CGG+ C S
Sbjct: 714 CGGTHCTS 721


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SRCLSIP 10
SRC++IP
Sbjct: 319 SRCIAIP 325


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 4 SRCLSIP 10
SRC++IP
Sbjct: 321 SRCIAIP 327


>sp|LEUC_PYRIL|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 4 SRCLSIP 10
SRC++IP
Sbjct: 317 SRCIAIP 323


>sp|LEUC_PYRAE|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SRCLSIP 10
SRC++IP
Sbjct: 317 SRCIAIP 323


>sp|Y4097_METAC|UPF0235 protein MA_4097|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GSRCLSIP 10
GSR LS+P
Sbjct: 27 GSRSLSVP 34


>sp|Y822_METMA|UPF0235 protein MM_0822|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GSRCLSIP 10
GSR LS+P
Sbjct: 26 GSRSLSVP 33


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CGGSRCLS 8
CGG+ C S
Sbjct: 703 CGGTHCRS 710


>sp|FTR_ARCFU|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGSRCLSIP 10
GG +C ++P
Sbjct: 135 GGRKCWAVP 143


>sp|RFRNP_METTP|RNA-FREE ribonuclease P|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 SRCLSI 9
SRCLSI
Sbjct: 125 SRCLSI 130


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CGGSRC 6
C G+RC
Sbjct: 487 CAGARC 492


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CGGSRCLS 8
C G+ C+S
Sbjct: 714 CAGTHCVS 721


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 CGGSRCLSI 9
CG S LSI
Sbjct: 454 CGASNSLSI 462


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 CGGSRCLSI 9
CG S LSI
Sbjct: 454 CGASNSLSI 462


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 CGGSRCLSI 9
CG S LSI
Sbjct: 455 CGASNSLSI 463


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 GGSRCLS 8
GG RCL+
Sbjct: 790 GGRRCLA 796


>sp|RRP41_METTH|EXOSOME complex component Rrp41|Methanothermobacter thermautotrophicus

Query: 2 GGSRCLSI 9
GG+RC I
Sbjct: 134 GGTRCAGI 141


>sp|LYSJ_AERPE|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 CGGSRC 6
CGGS C
Sbjct: 383 CGGSGC 388


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 2 GGSRC 6
GGSRC
Sbjct: 134 GGSRC 138




92|SequenceR|465|456|GASVGCGGSR

>sp|NUSA_HALSA|PROBABLE transcription termination protein NusA|Halobacterium salinarum

Query: 1 GASVGCGGSR 10
GA++G GGSR
Sbjct: 44 GAAIGDGGSR 53


>sp|NUSA_HALS3|PROBABLE transcription termination protein NusA|Halobacterium salinarum

Query: 1 GASVGCGGSR 10
GA++G GGSR
Sbjct: 44 GAAIGDGGSR 53


>sp|FTSZ2_ARCFU|CELL division protein FtsZ 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VGCGGS 9
VGCGGS
Sbjct: 35 VGCGGS 40


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GASVGCG 7
G SVGCG
Sbjct: 10 GCSVGCG 16


>sp|Y1374_METJA|UNCHARACTERIZED protein MJ1374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VGCGGSR 10
+GCGG R
Sbjct: 8 LGCGGGR 14


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 SVGCGGSR 10
++GC GSR
Sbjct: 189 TLGCNGSR 196


>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GASVGCGGS 9
G VGCGG+
Sbjct: 120 GVLVGCGGA 128


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GASVGCGGS 9
G VGCGG+
Sbjct: 120 GVLVGCGGA 128


>sp|FTSZ1_METJA|CELL division protein FtsZ 1|Methanocaldococcus jannaschii (strain

Query: 4 VGCGGS 9
VGCGG+
Sbjct: 43 VGCGGA 48


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 1 GASVGCGG 8
G ++GCGG
Sbjct: 184 GLALGCGG 191


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 281 GAKQVCGGGR 290


>sp|HIS82_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SVGCGGS 9
+VGCG S
Sbjct: 79 AVGCGAS 85


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 GASVGCGG 8
G ++GCGG
Sbjct: 184 GLALGCGG 191


>sp|TRUB_METMA|PROBABLE tRNA pseudouridine synthase B|Methanosarcina mazei (strain ATCC

Query: 1 GASVGCGG 8
G ++GCGG
Sbjct: 184 GLALGCGG 191


>sp|SYH_METVS|HISTIDINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 281 GARQVCGGGR 290


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 283 GARQVCGGGR 292


>sp|SYH_METM6|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 283 GARQVCGGGR 292


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 283 GARQVCGGGR 292


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 281 GAKQICGGGR 290


>sp|SYH_META3|HISTIDINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GASVGCGGSR 10
GA CGG R
Sbjct: 283 GARQVCGGGR 292


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 SVGCGGS 9
S GCGG+
Sbjct: 686 SEGCGGT 692


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VGCGG 8
+GCGG
Sbjct: 48 IGCGG 52


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain

Query: 4 VGCGGS 9
VGCGG+
Sbjct: 43 VGCGGA 48


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC

Query: 4 VGCGGS 9
VGCGG+
Sbjct: 36 VGCGGA 41


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC

Query: 4 VGCGGS 9
VGCGG+
Sbjct: 36 VGCGGA 41


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 6 CGGSR 10
CGGSR
Sbjct: 419 CGGSR 423


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 1 GASVGCGGSR 10
GA++ GGSR
Sbjct: 115 GAALSVGGSR 124




93|SequenceR|470|461|VGKGNGASVG

>sp|PROF3_LOKSG|LOKI profilin-3|Lokiarchaeum sp. (strain GC14_75)

Query: 1 VGKGNGASVG 10
+GKG G VG
Sbjct: 81 IGKGKGNIVG 90


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 2 GKGNGASVG 10
G+G AS+G
Sbjct: 241 GRGKSASIG 249


>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 2 GKGNGASVG 10
G+G AS+G
Sbjct: 242 GRGKSASIG 250


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GNGASV 9
GNGASV
Sbjct: 16 GNGASV 21




94|SequenceR|475|466|DFEIRVGKGN

>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 FEIRVGKG 9
FE+RVG+G
Sbjct: 82 FEVRVGEG 89


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DFEIRVGKGN 10
DF I VG+GN
Sbjct: 161 DFRIGVGEGN 170


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 2 FEIRVGKGN 10
FE+R+G GN
Sbjct: 155 FELRIGGGN 163


>sp|RL3_THEAC|LARGE ribosomal subunit protein uL3|Thermoplasma acidophilum (strain ATCC

Query: 2 FEIRVGKGN 10
FE+R+G GN
Sbjct: 155 FELRIGGGN 163


>sp|CBIA_SACS2|COBYRINATE a,c-diamide synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FEIRVGKG 9
F++R+GKG
Sbjct: 396 FKVRIGKG 403


>sp|DNLI_META3|DNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FEIRVGKGN 10
F+I+ GKGN
Sbjct: 553 FDIQKGKGN 561


>sp|KHSE_THEAC|HOMOSERINE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DFEIRVGKG 9
D EIR+ KG
Sbjct: 75 DIEIRIEKG 83


>sp|OGT_PYRAB|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DFEIRV 6
DFEIRV
Sbjct: 92 DFEIRV 97


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DFEIRVGKG 9
DFE R+GK
Sbjct: 165 DFEERIGKN 173


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 DFEIRVGKGN 10
DFE+RV N
Sbjct: 898 DFEVRVHAPN 907


>sp|GCH32_HALSA|GTP cyclohydrolase III 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 DFEIRVGKGN 10
DF++ VG G+
Sbjct: 212 DFQVGVGHGD 221


>sp|RL11_DESA1|LARGE ribosomal subunit protein uL11|Desulfurococcus amylolyticus

Query: 1 DFEIRVG 7
+FE+RVG
Sbjct: 63 EFEVRVG 69


>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DFEIRVGKG 9
D E+R+G G
Sbjct: 37 DAEVRIGSG 45


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DFEIRV 6
DFEIRV
Sbjct: 155 DFEIRV 160


>sp|AGLI_HALVD|GLYCOSYLTRANSFERASE AglI|Haloferax volcanii (strain ATCC 29605

Query: 3 EIRVGKG 9
E+RVG+G
Sbjct: 220 ELRVGRG 226


>sp|ASD_METBF|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina barkeri

Query: 1 DFEIRVGKG 9
DFEI V KG
Sbjct: 180 DFEIIVRKG 188


>sp|RL11_KORCO|LARGE ribosomal subunit protein uL11|Korarchaeum cryptofilum (strain

Query: 2 FEIRVG 7
FEIRVG
Sbjct: 64 FEIRVG 69


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FEIRVGKGN 10
FE+ +G+G+
Sbjct: 143 FEVSIGRGD 151




95|SequenceR|480|471|IDNEDDFEIR

>sp|RNP2_SULTO|RIBONUCLEASE P protein component 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IDNEDDFEIR 10
I +ED+FEIR
Sbjct: 32 IISEDNFEIR 41


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IDNEDDFEI 9
I EDDFE+
Sbjct: 126 IGYEDDFEV 134


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 IDNEDDFE 8
+DN D+FE
Sbjct: 178 VDNFDEFE 185


>sp|TREH_THEAC|TREHALASE acidophilum (strain ATCC 25905

Query: 1 IDNEDDF 7
IDN DDF
Sbjct: 294 IDNSDDF 300


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 NEDDFEIR 10
NE+D +IR
Sbjct: 16 NEEDLDIR 23


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 NEDDFE 8
NEDDFE
Sbjct: 548 NEDDFE 553


>sp|TRPB_HALSA|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 IDNEDDF 7
+DNED F
Sbjct: 43 LDNEDGF 49


>sp|TRPB_HALS3|TRYPTOPHAN synthase beta chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 IDNEDDF 7
+DNED F
Sbjct: 43 LDNEDGF 49


>sp|KCY_SULAC|CYTIDYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EDDFEI 9
EDDFEI
Sbjct: 54 EDDFEI 59


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 2 DNEDDFEI 9
+N+DDF++
Sbjct: 16 NNDDDFDL 23




96|SequenceR|485|476|TGGVNIDNED

>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 TGGVNIDNED 10
TGG+NI ED
Sbjct: 153 TGGLNIKEED 162


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 TGGVNIDNE 9
TGG+NI+ E
Sbjct: 153 TGGLNINEE 161


>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGVNIDN 8
GG+N+DN
Sbjct: 151 GGLNLDN 157


>sp|DTDA_METMJ|D-AMINOACYL-TRNA deacylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GGVNIDN 8
GGVNI N
Sbjct: 13 GGVNIKN 19


>sp|Y3514_METJA|UNCHARACTERIZED protein MJECL14|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGVNIDNED 10
G +N+ NED
Sbjct: 182 GNINLTNED 190


>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GGVNIDNED 10
GG+++D+ED
Sbjct: 292 GGISLDDED 300


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 VNIDNED 10
VNIDN D
Sbjct: 314 VNIDNRD 320


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 3 GVNIDNE 9
GVN+D+E
Sbjct: 356 GVNLDDE 362


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 2 GGVNID 7
GGVN+D
Sbjct: 444 GGVNLD 449


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TGGVNID 7
TGGVN D
Sbjct: 279 TGGVNTD 285


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TGGVNIDNE 9
TG +N++NE
Sbjct: 256 TGMINVNNE 264


>sp|SUI1_IGNH4|PROTEIN translation factor SUI1 homolog|Ignicoccus hospitalis (strain

Query: 3 GVNIDNE 9
G+N+DNE
Sbjct: 46 GLNLDNE 52


>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GGVNIDN 8
GG+++DN
Sbjct: 701 GGIHVDN 707


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GGVNIDN 8
GG+ +DN
Sbjct: 337 GGIRVDN 343


>sp|AATE_METMA|A-TYPE ATP synthase subunit E|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GGVNIDNED 10
GG+ ++NED
Sbjct: 145 GGIVLENED 153


>sp|AATE_METAC|A-TYPE ATP synthase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 2 GGVNIDNED 10
GGV ++NED
Sbjct: 145 GGVVLENED 153


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GVNIDNE 9
G+N DNE
Sbjct: 220 GINSDNE 226


>sp|Y726_METJA|UNCHARACTERIZED protein MJ0726|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GGVNIDNED 10
G VN+D+E+
Sbjct: 32 GAVNLDDEE 40




97|SequenceR|490|481|DVATNTGGVN

>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VATNTGGV 9
+ATN GGV
Sbjct: 138 IATNAGGV 145


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VATNTGGV 9
+AT TGG+
Sbjct: 400 IATETGGL 407


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 1 DVATNTGGVN 10
DV N+GG N
Sbjct: 54 DVTVNSGGAN 63




98|SequenceR|495|486|AVSTTDVATN

***** No hits found ******


99|SequenceR|500|491|NHRAEAVSTT

>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HRAEAVS 8
HRAEAV+
Sbjct: 163 HRAEAVA 169




100|SequenceR|505|496|EGISPNHRAE

>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ISPNHRAE 10
ISP HR+E
Sbjct: 292 ISPTHRSE 299


>sp|FERB_SULME|FERREDOXIN B|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 2 GISPNHRA 9
GI PN+R+
Sbjct: 1 GIDPNYRS 8


>sp|FAEHP_METTP|BIFUNCTIONAL enzyme Fae/Hps|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EGISPNHRAE 10
EG+ P RAE
Sbjct: 96 EGVIPKERAE 105


>sp|G3P_NATPD|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SPNHRAE 10
SPNH AE
Sbjct: 36 SPNHEAE 42


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EGISPNHR 8
EG+ NHR
Sbjct: 636 EGVKTNHR 643


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 EGISPN 6
EGISPN
Sbjct: 479 EGISPN 484


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GISPNHRA 9
G+ PNH++
Sbjct: 78 GLCPNHKS 85


>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ISPNHR 8
I PNHR
Sbjct: 72 IGPNHR 77


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGISPNHRAE 10
EGI P RA+
Sbjct: 97 EGIIPRERAD 106


>sp|FAEHP_METTH|BIFUNCTIONAL enzyme Fae/Hps|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EGISPNHRAE 10
EGI P +AE
Sbjct: 96 EGIIPEEKAE 105


>sp|EF2_HALSA|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 EGISPN 6
EG+SPN
Sbjct: 478 EGVSPN 483


>sp|EF2_HALS3|ELONGATION factor 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 EGISPN 6
EG+SPN
Sbjct: 478 EGVSPN 483


>sp|FERA_SULME|ZINC-CONTAINING ferredoxin A|Sulfuracidifex metallicus (Sulfolobus metallicus)

Query: 2 GISPNHRA 9
GI PN+R
Sbjct: 1 GIDPNYRT 8


>sp|FER_ACIAM|ZINC-CONTAINING ferredoxin|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 GISPNHR 8
GI PN+R
Sbjct: 1 GIDPNYR 7


>sp|Y1383_THEVO|MEMO1 family protein TV1383|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ISPNHR 8
I PNHR
Sbjct: 72 IGPNHR 77


>sp|FER_SULAC|ZINC-CONTAINING ferredoxin|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GISPNHR 8
GI PN+R
Sbjct: 1 GIDPNYR 7




101|SequenceR|510|501|GGVSGEGISP

>sp|ARGC_METST|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GVSGEGISP 10
GVSG GISP
Sbjct: 175 GVSGAGISP 183


>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GVSGEGISP 10
G+SG GISP
Sbjct: 173 GISGAGISP 181


>sp|ARGC_METJA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVSGEGISP 10
GVSG GI P
Sbjct: 178 GVSGAGIKP 186


>sp|AATD_SULTO|A-TYPE ATP synthase subunit D|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GVSGEGIS 9
GVS EGIS
Sbjct: 69 GVSAEGIS 76


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GVSGEGISP 10
G+SG GISP
Sbjct: 176 GISGAGISP 184


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GVSGEGISP 10
G+SG GISP
Sbjct: 172 GISGAGISP 180


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GVSGEGISP 10
GV EG+SP
Sbjct: 108 GVDAEGMSP 116


>sp|ARGC_METMJ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GVSGEGISP 10
GVSG G SP
Sbjct: 169 GVSGAGTSP 177


>sp|FLAB3_THEKO|FLAGELLIN B3|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GVSGEGISP 10
GV GEGI P
Sbjct: 216 GVFGEGIKP 224


>sp|PYRI_HALWD|ASPARTATE carbamoyltransferase regulatory chain|Haloquadratum walsbyi

Query: 2 GVSGEGIS 9
G SGEG+S
Sbjct: 60 GSSGEGVS 67


>sp|FRHA_METTH|COENZYME F420 hydrogenase subunit alpha|Methanothermobacter

Query: 3 VSGEGISP 10
V+GEGI P
Sbjct: 144 VAGEGIHP 151


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus (strain

Query: 1 GGVSGEGISP 10
GGVSG I P
Sbjct: 210 GGVSGPAIKP 219


>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 3 VSGEGISP 10
V+G G+SP
Sbjct: 26 VAGSGVSP 33


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GVSGEGISP 10
GVSG G++P
Sbjct: 172 GVSGAGVNP 180


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GVSGEGISP 10
GVSG G++P
Sbjct: 177 GVSGAGVNP 185


>sp|DNLI1_THEPD|DNA ligase 1|Thermofilum pendens (strain DSM 2475

Query: 1 GGVSGEG 7
GVSGEG
Sbjct: 99 AGVSGEG 105


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GVSGEGISP 10
GVSG I+P
Sbjct: 170 GVSGVSINP 178


>sp|PYRDB_PYRFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus furiosus (strain

Query: 1 GGVSGEGISP 10
GG SG GI P
Sbjct: 208 GGYSGPGIKP 217


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 3 VSGEGISP 10
VSG GI+P
Sbjct: 32 VSGRGITP 39


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGVSGEGI 8
GG++GE I
Sbjct: 17 GGITGEDI 24


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 1 GGVSGEGISP 10
GG SG GI P
Sbjct: 211 GGYSGPGIKP 220


>sp|Y456_ARCFU|UNCHARACTERIZED protein AF_0456|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GGVSGEG 7
GG+SG G
Sbjct: 50 GGISGSG 56


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 3 VSGEGISP 10
V+G GISP
Sbjct: 504 VAGVGISP 511


>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 GVSGEGISP 10
GVSG G+ P
Sbjct: 172 GVSGAGVKP 180


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 1 GGVSGEGISP 10
GG+SG+ + P
Sbjct: 222 GGLSGKAVKP 231




102|SequenceR|515|506|LSGTLGGVSG

>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 1 LSGTLGGVSG 10
L+G++GG++G
Sbjct: 176 LNGSVGGITG 185


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 3 GTLGGVSG 10
GT+GGVSG
Sbjct: 446 GTIGGVSG 453


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LSGTLGGVSG 10
+ GTL VSG
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSGTLGGVSG 10
+ GTL VSG
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 LSGTLGGVSG 10
+ GTL VSG
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 LSGTLGGVSG 10
+ GTL VSG
Sbjct: 311 IGGTLAAVSG 320


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 LSGTLGGVSG 10
+ GTL VSG
Sbjct: 311 IGGTLAAVSG 320


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSGTLGGV 8
+SG LGGV
Sbjct: 538 ISGALGGV 545


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 1 LSGTLGGVSG 10
LSG L GV+G
Sbjct: 206 LSGALAGVAG 215


>sp|AATE2_METHJ|A-TYPE ATP synthase subunit E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 TLGGVSG 10
T+GG+SG
Sbjct: 153 TIGGLSG 159




103|SequenceR|520|511|SGSASLSGTL

>sp|Y727_METTH|UPF0280 protein MTH_727|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 SGSASLSGTL 10
+GS+SLSGT+
Sbjct: 136 AGSSSLSGTV 145


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 2 GSASLSGTL 10
G SLSGTL
Sbjct: 484 GIESLSGTL 492


>sp|ARCC_THEVO|CARBAMATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SGSASLSG 8
+GSA+LSG
Sbjct: 290 NGSAALSG 297


>sp|Y482_METM7|UPF0280 protein MmarC7_0482|Methanococcus maripaludis (strain C7 /

Query: 1 SGSASLSGTL 10
+G++SLSG+L
Sbjct: 126 AGNSSLSGSL 135




104|SequenceR|525|516|IRDMHSGSAS

>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 IRDMHS 6
IRDMHS
Sbjct: 266 IRDMHS 271


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 DMHSGSAS 10
D+H GS+S
Sbjct: 568 DLHPGSSS 575


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 RDMHSGS 8
R++HSGS
Sbjct: 10 REIHSGS 16




105|SequenceR|530|521|DRIAGIRDMH

>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 2 RIAGIRDM 9
R+AGIRD+
Sbjct: 169 RLAGIRDV 176


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 2 RIAGIRDMH 10
+I G+RD H
Sbjct: 564 KIRGVRDAH 572


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 2 RIAGIRDM 9
R+AGI+D+
Sbjct: 161 RLAGIKDV 168


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 2 RIAGIRDM 9
R+AGI+D+
Sbjct: 165 RLAGIKDV 172


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 2 RIAGIRDM 9
R+AGI+D+
Sbjct: 165 RLAGIKDV 172


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 2 RIAGIRDM 9
R+AGI+D+
Sbjct: 181 RLAGIKDV 188


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 DRIAGIRDMH 10
DRI IR MH
Sbjct: 844 DRIEFIRRMH 853


>sp|GGGPS_HALWD|GERANYLGERANYLGLYCERYL phosphate synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DRIAGIRDMH 10
+ +AG++D H
Sbjct: 225 ETVAGVKDAH 234


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RIAGIRDM 9
R+AGI+D+
Sbjct: 176 RLAGIKDV 183


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 IAGIRDM 9
IAGIRD+
Sbjct: 84 IAGIRDV 90


>sp|SYH_HALWD|HISTIDINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DRIAGIRDMH 10
DR+ G RD +
Sbjct: 3 DRLKGFRDFY 12


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IAGIRDM 9
IAGIRD+
Sbjct: 84 IAGIRDV 90


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RIAGIRDM 9
RIAG+R++
Sbjct: 119 RIAGVREI 126


>sp|SYH_HALSA|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DRIAGIRDMH 10
DR+ G RD +
Sbjct: 3 DRLKGFRDFY 12


>sp|SYH_HALS3|HISTIDINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DRIAGIRDMH 10
DR+ G RD +
Sbjct: 3 DRLKGFRDFY 12


>sp|TRUA_HALSA|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC

Query: 1 DRIAGIRDMH 10
DR+ G D H
Sbjct: 131 DRLTGTHDFH 140


>sp|TRUA_HALS3|TRNA pseudouridine synthase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 DRIAGIRDMH 10
DR+ G D H
Sbjct: 131 DRLTGTHDFH 140


>sp|GUAAB_HALLT|GMP synthase [glutamine-hydrolyzing] subunit B|Halorubrum

Query: 1 DRIAGIRD 8
DR+AG+ D
Sbjct: 88 DRLAGVTD 95


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 1 DRIAGIRDMH 10
D G+RD H
Sbjct: 142 DPFVGLRDYH 151


>sp|CAR_HALS3|TRANSDUCER protein Car|Halobacterium salinarum (strain ATCC 29341

Query: 1 DRIAGIRDM 9
DR+A I DM
Sbjct: 438 DRVAEIEDM 446




106|SequenceR|535|526|TESLNDRIAG

>sp|THS3_HALVD|CHAPERONIN subunit CTT3|Haloferax volcanii (strain ATCC 29605

Query: 1 TESLNDRIAG 10
T+S++DR+AG
Sbjct: 292 TKSIDDRVAG 301


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 ESLNDRIAG 10
+ L DRIAG
Sbjct: 175 DDLGDRIAG 183


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 ESLNDRIAG 10
ESL DR+ G
Sbjct: 8259 ESLRDRLTG 8267




107|SequenceR|540|531|AMTSATESLN

>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AMTSATESLN 10
A+T A ES+N
Sbjct: 380 ALTKAVESVN 389




108|SequenceR|545|536|SAGALAMTSA

***** No hits found ******


109|SequenceR|550|541|LSGTISAGAL

>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 LSGTISAGAL 10
L TISAGA
Sbjct: 439 LGDTISAGAF 448


>sp|K6PF_PYRHO|ADP-SPECIFIC phosphofructokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LSGTISAGAL 10
L TISAGA
Sbjct: 431 LGDTISAGAF 440


>sp|K6PF_PYRAB|ADP-SPECIFIC phosphofructokinase|Pyrococcus abyssi (strain GE5 /

Query: 1 LSGTISAGAL 10
L TISAGA
Sbjct: 432 LGDTISAGAF 441


>sp|MTAB_METBF|METHANOL--CORRINOID protein co-methyltransferase|Methanosarcina barkeri (strain Fusaro

Query: 2 SGTISAG 8
+GTISAG
Sbjct: 210 TGTISAG 216


>sp|SYFA_HALSA|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 700922

Query: 3 GTISAGAL 10
GTI +GAL
Sbjct: 121 GTIDSGAL 128


>sp|SYFA_HALS3|PHENYLALANINE--TRNA ligase alpha subunit|Halobacterium salinarum (strain ATCC 29341

Query: 3 GTISAGAL 10
GTI +GAL
Sbjct: 121 GTIDSGAL 128


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 1 LSGTISAGAL 10
LSGT+SA L
Sbjct: 400 LSGTLSARLL 409


>sp|Y1427_HALMA|UNCHARACTERIZED protein rrnAC1427|Haloarcula marismortui (strain ATCC 43049

Query: 1 LSGTISAG 8
L+GTI+AG
Sbjct: 111 LAGTIAAG 118




110|SequenceR|555|546|MASGSLSGTI

>sp|CDPAS_THEAC|CDP-ARCHAEOL synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MASGSLSGTI 10
MA+GSL+G I
Sbjct: 89 MATGSLTGDI 98


>sp|Y1382_METTH|UNCHARACTERIZED transporter MTH_1382|Methanothermobacter thermautotrophicus

Query: 1 MASGSLSGTI 10
M +G+LSGTI
Sbjct: 73 MITGTLSGTI 82


>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 MASGSLSGTI 10
MA GS+ GT+
Sbjct: 274 MAMGSILGTV 283


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 MASGSLSGTI 10
M GSL GT+
Sbjct: 269 MGMGSLMGTV 278


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MASGSLSGTI 10
M GSL GT+
Sbjct: 269 MGMGSLMGTV 278


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 MASGSLSGTI 10
M GSL GT+
Sbjct: 270 MGMGSLMGTV 279


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 SGSLSGTI 10
+GSL+GT+
Sbjct: 596 NGSLAGTV 603




111|SequenceR|560|551|NFCNVMASGS

>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FCNVMASG 9
FC ++A+G
Sbjct: 11 FCEIVANG 18




112|SequenceR|565|556|QVELRNFCNV

>sp|MCRG_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 5 RNFCN 9
RNFCN
Sbjct: 16 RNFCN 20


>sp|MCRG_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 5 RNFCN 9
RNFCN
Sbjct: 16 RNFCN 20


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 4 LRNFCNV 10
L+NFC V
Sbjct: 176 LKNFCKV 182


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ELRNFCNV 10
ELRN C +
Sbjct: 153 ELRNLCEM 160


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 4 LRNFCNV 10
L+NFC V
Sbjct: 176 LKNFCKV 182


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 4 LRNFCNV 10
L+NFC V
Sbjct: 176 LKNFCKV 182




113|SequenceR|570|561|KQVDAQVELR

***** No hits found ******


114|SequenceR|575|566|LSYREKQVDA

>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LSYREKQVD 9
+SY EKQ D
Sbjct: 363 ISYEEKQFD 371


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 3 YREKQVDA 10
YR+K VDA
Sbjct: 97 YRDKSVDA 104


>sp|SFSA_METS3|SUGAR fermentation stimulation protein homolog|Methanobrevibacter smithii

Query: 4 REKQVD 9
REKQVD
Sbjct: 103 REKQVD 108




115|SequenceR|580|571|GSEGSLSYRE

>sp|NIFK_METBA|NITROGENASE molybdenum-iron protein beta chain|Methanosarcina barkeri

Query: 1 GSEGSLSY 8
GS+G LSY
Sbjct: 44 GSQGCLSY 51


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSEGSLSYRE 10
G G+LSY+E
Sbjct: 200 GIFGTLSYKE 209


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 GSEGSLSYRE 10
GS+G+++Y++
Sbjct: 228 GSKGAIAYKD 237


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GSEGSLSYR 9
GSE S++YR
Sbjct: 155 GSEPSITYR 163


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 3 EGSLSY 8
EGSLSY
Sbjct: 14 EGSLSY 19


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SEGSLSYRE 10
+EGS SYR+
Sbjct: 342 NEGSWSYRD 350


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SEGSLSYRE 10
+EGS SYR+
Sbjct: 342 NEGSWSYRD 350


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 GSEGSLSYRE 10
G E LSY E
Sbjct: 67 GEEAKLSYHE 76




116|SequenceR|585|576|GLSVTGSEGS

>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 2 LSVTGSEG 9
L +TGSEG
Sbjct: 39 LGITGSEG 46


>sp|Y054_METJA|UNCHARACTERIZED protein MJ0054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GLSVTGSEGS 10
G+ +TG EGS
Sbjct: 196 GVHLTGIEGS 205


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VTGSEG 9
VTGSEG
Sbjct: 360 VTGSEG 365


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLSVTGSEG 9
GL+ T SEG
Sbjct: 514 GLTYTNSEG 522


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GLSVTGSEG 9
GL+ T SEG
Sbjct: 514 GLTYTNSEG 522


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 2 LSVTGSEGS 10
L +TG EG+
Sbjct: 31 LGITGKEGA 39


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 2 LSVTGSEG 9
L VTG+EG
Sbjct: 273 LRVTGTEG 280




117|SequenceR|590|581|NDSVTGLSVT

>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NDSVTGLS 8
N+S+TGLS
Sbjct: 293 NESLTGLS 300


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DSVTGLSV 9
D VTGLS+
Sbjct: 934 DGVTGLSI 941


>sp|THI4_METBF|THIAMINE thiazole synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NDSVTGLSV 9
ND VTG+ V
Sbjct: 135 NDRVTGIVV 143


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DSVTGLSV 9
D VTGLSV
Sbjct: 577 DRVTGLSV 584


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DSVTGLSV 9
D VTGLSV
Sbjct: 577 DRVTGLSV 584




118|SequenceR|595|586|AKTSANDSVT

***** No hits found ******


119|SequenceR|600|591|ISGAMAKTSA

>sp|RLME_THEAC|RIBOSOMAL RNA large subunit methyltransferase|Thermoplasma acidophilum

Query: 1 ISGAMAKTSA 10
+S AMAKTS
Sbjct: 109 LSDAMAKTSG 118




120|SequenceR|605|596|IYSNLISGAM

>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 IYSNLISGA 9
IY NL+ GA
Sbjct: 765 IYQNLVRGA 773


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IYSNLISGA 9
IY NL+ GA
Sbjct: 765 IYQNLVRGA 773


>sp|HCGF_METVS|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus vannielii (strain

Query: 1 IYSNLISG 8
IY NLI G
Sbjct: 129 IYGNLIKG 136


>sp|SECD_METJA|PROTEIN-EXPORT membrane protein SecD|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IYSNLISGAM 10
IYS L SGA+
Sbjct: 213 IYSALKSGAL 222




121|SequenceR|610|601|EKDLPIYSNL

>sp|XYLG_SULAC|XYLOSE/ARABINOSE import ATP-binding protein XylG|Sulfolobus acidocaldarius (strain

Query: 3 DLPIYSNL 10
DLPIY N+
Sbjct: 93 DLPIYYNI 100


>sp|GLMM_META3|PHOSPHOGLUCOSAMINE mutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DLPIYSNL 10
D+P YSNL
Sbjct: 358 DVPCYSNL 365


>sp|RS17_NITMS|SMALL ribosomal subunit protein uS17|Nitrosopumilus maritimus (strain

Query: 1 EKDLPIYSN 9
+KD P+Y N
Sbjct: 50 QKDAPVYFN 58


>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 2 KDLPIYS 8
KDLPI+S
Sbjct: 320 KDLPIFS 326


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EKDLPIYSNL 10
EK+ P+Y+N
Sbjct: 198 EKENPLYANF 207


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 1 EKDLPIYSNL 10
EK+ P+Y+N
Sbjct: 198 EKENPLYANF 207


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 KDLPIYSNL 10
KDLP+ SN+
Sbjct: 14 KDLPLPSNI 22


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EKDLPIYSNL 10
EK+ PIY L
Sbjct: 92 EKNRPIYEKL 101


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EKDLPIY 7
++DLP+Y
Sbjct: 656 QRDLPVY 662


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EKDLPIYSNL 10
+ DLP+Y+ +
Sbjct: 651 QADLPVYAKI 660


>sp|TPIS_SACS2|TRIOSEPHOSPHATE isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKDLPIYSN 9
E DLPIY+
Sbjct: 54 EVDLPIYAE 62


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EKDLPIYSNL 10
EKDLP+ S +
Sbjct: 662 EKDLPVGSTI 671


>sp|PMD_HALVD|PHOSPHOMEVALONATE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 EKDLPIY 7
E+D+P+Y
Sbjct: 267 EEDVPVY 273


>sp|RPO1C_METAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina acetivorans (strain

Query: 2 KDLPIYSNL 10
KDLP SN+
Sbjct: 11 KDLPFPSNI 19


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 2 KDLPIYSN 9
K LPIYS
Sbjct: 117 KSLPIYSG 124


>sp|NPPNK_METMP|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanococcus maripaludis (strain DSM

Query: 2 KDLPIYS 8
KD+P YS
Sbjct: 95 KDIPFYS 101


>sp|TRMY_METLZ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocorpusculum

Query: 2 KDLPIYS 8
KDLP YS
Sbjct: 163 KDLPKYS 169


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 2 KDLPIYSNL 10
KDLPI S +
Sbjct: 233 KDLPILSTI 241


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 1 EKDLPIY 7
EK++PIY
Sbjct: 73 EKNIPIY 79


>sp|AMPD_METTH|ANHYDROMEVALONATE phosphate decarboxylase|Methanothermobacter thermautotrophicus

Query: 1 EKDLPIYSNL 10
E D+P+ S L
Sbjct: 44 ESDIPVISGL 53




122|SequenceR|615|606|EMSNGEKDLP

>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GEKDLP 10
GEKDLP
Sbjct: 27 GEKDLP 32


>sp|DPCKG_METLZ|GTP-DEPENDENT dephospho-CoA kinase|Methanocorpusculum labreanum (strain ATCC

Query: 2 MSNGEKDL 9
M NGE+DL
Sbjct: 107 MVNGEEDL 114


>sp|LYSZ_PYRAR|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum arsenaticum

Query: 2 MSNGEKDLP 10
+SNG DLP
Sbjct: 237 ISNGLADLP 245


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 MSNGEKDL 9
+ NGEKDL
Sbjct: 362 IHNGEKDL 369


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMSNGEK 7
EM NGEK
Sbjct: 287 EMENGEK 293


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EMSNGEKDLP 10
E+S+G+ +LP
Sbjct: 262 ELSSGKGELP 271


>sp|MIG_AERPE|THYMINE-DNA glycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GEKDLP 10
G+KDLP
Sbjct: 24 GDKDLP 29




123|SequenceR|620|611|IDVQVEMSNG

>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDVQVEMSN 9
ID QVEM N
Sbjct: 61 IDTQVEMFN 69


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 3 VQVEMSNG 10
V+VEM NG
Sbjct: 35 VEVEMPNG 42


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DVQVEMSNG 10
D QVE+ NG
Sbjct: 361 DRQVEIKNG 369


>sp|Y288_METJA|UNCHARACTERIZED protein MJ0288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDVQVEMSNG 10
ID+ V SNG
Sbjct: 35 IDIMVNASNG 44


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 3 VQVEMSNG 10
V++EM NG
Sbjct: 32 VEIEMPNG 39


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDVQVEMSNG 10
I V +EM NG
Sbjct: 282 IGVNIEMENG 291


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 3 VQVEMSNG 10
++VEM NG
Sbjct: 387 IRVEMDNG 394




124|SequenceR|625|616|SPKSEIDVQV

>sp|GCH31_HALSA|GTP cyclohydrolase III 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 SPKSEIDVQ 9
SP+ E+D+Q
Sbjct: 22 SPRREVDLQ 30


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KSEIDVQV 10
KSE+DVQ+
Sbjct: 162 KSELDVQI 169


>sp|Y2141_ARCFU|UNCHARACTERIZED protein AF_2141|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PKSEIDVQ 9
PK E+DV+
Sbjct: 73 PKDELDVE 80




125|SequenceR|630|621|NHRFKSPKSE

>sp|RL4_THEVO|LARGE ribosomal subunit protein uL4|Thermoplasma volcanium (strain ATCC

Query: 1 NHRFKSPKS 9
N R+K PKS
Sbjct: 189 NRRYKVPKS 197


>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 1 NHRFKSPKSE 10
NH F+ KSE
Sbjct: 8 NHNFRQIKSE 17


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 3 RFKSPKS 9
RFK PKS
Sbjct: 144 RFKDPKS 150


>sp|PRIS_METKA|DNA primase small subunit PriS|Methanopyrus kandleri (strain AV19 /

Query: 3 RFKSPKS 9
+FK+PKS
Sbjct: 64 KFKNPKS 70




126|SequenceR|635|626|SSSGSNHRFK

>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 SNHRFK 10
SNHRFK
Sbjct: 327 SNHRFK 332


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 4 GSNHRF 9
G+NHRF
Sbjct: 203 GANHRF 208


>sp|HDG_METAC|HYPOXANTHINE DNA glycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSSGSNHRF 9
SSSG+N RF
Sbjct: 136 SSSGANRRF 144


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 SSGSNHRF 9
+SGS H+F
Sbjct: 243 ASGSEHKF 250


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 2 SSGSNHRF 9
+SGS H+F
Sbjct: 240 ASGSEHKF 247


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 SSGSNHRF 9
+SGS H+F
Sbjct: 243 ASGSEHKF 250


>sp|GCS2_NATPD|GLUTAMATE--CYSTEINE ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SGSNHR 8
SG+NHR
Sbjct: 274 SGANHR 279




127|SequenceR|640|631|SGDDVSSSGS

>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GDDVSSSG 9
GDDV+S G
Sbjct: 290 GDDVASCG 297


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GDDVSSSG 9
GDDV+S G
Sbjct: 290 GDDVASCG 297


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SGDDVSSS 8
SGDD+SS+
Sbjct: 169 SGDDISSA 176


>sp|NFI_METTP|ENDONUCLEASE V|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 SGDDVSSSGS 10
+G DVS SGS
Sbjct: 41 AGADVSFSGS 50




128|SequenceR|645|636|HSRTASGDDV

>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HSRTASGDD 9
H RT++G D
Sbjct: 127 HKRTSTGKD 135


>sp|CARB_METPE|CARBAMOYL phosphate synthase large chain|Methanosphaerula palustris (strain

Query: 3 RTASGDDV 10
RTA+GD V
Sbjct: 495 RTAAGDPV 502


>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 2 SRTASGDDV 10
SRT S DDV
Sbjct: 186 SRTQSKDDV 194




129|SequenceR|650|641|SSGGAHSRTA

>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SSGGAHSR 8
SSGG H R
Sbjct: 352 SSGGVHPR 359


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 GGAHSR 8
GGAH+R
Sbjct: 193 GGAHAR 198


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GGAHSR 8
GGAH+R
Sbjct: 193 GGAHAR 198


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 SSGGAHSRT 9
S GG HS T
Sbjct: 120 SCGGVHSYT 128




130|SequenceR|655|646|EPLGSSSGGA

>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EPLGSSSG 8
EPL SSSG
Sbjct: 306 EPLSSSSG 313


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LGSSSGGA 10
+GSS GGA
Sbjct: 104 MGSSYGGA 111


>sp|PIP_THEAC|PROLINE iminopeptidase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LGSSSGGA 10
+GSS GGA
Sbjct: 102 MGSSYGGA 109




131|SequenceR|660|651|ASSKGEPLGS

>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SSKGEPLG 9
SSKG PLG
Sbjct: 71 SSKGAPLG 78


>sp|PYRH_METAR|URIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 4 KGEPLGS 10
KGEP+G+
Sbjct: 214 KGEPIGT 220


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SKGEPLG 9
+GEPLG
Sbjct: 67 QRGEPLG 73


>sp|ASD_METKA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanopyrus kandleri

Query: 3 SKGEPLG 9
+KGEP+G
Sbjct: 168 NKGEPIG 174


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 4 KGEPLGS 10
KGEP+G+
Sbjct: 142 KGEPVGA 148


>sp|RL5_PYRAE|LARGE ribosomal subunit protein uL5|Pyrobaculum aerophilum (strain ATCC

Query: 4 KGEPLG 9
KGEP+G
Sbjct: 67 KGEPIG 72


>sp|RL5_NITMS|LARGE ribosomal subunit protein uL5|Nitrosopumilus maritimus (strain

Query: 4 KGEPLG 9
KGEP+G
Sbjct: 61 KGEPIG 66


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 GEPLGS 10
GEP+GS
Sbjct: 93 GEPIGS 98


>sp|RL5_METBU|LARGE ribosomal subunit protein uL5|Methanococcoides burtonii (strain

Query: 4 KGEPLG 9
KGEP+G
Sbjct: 57 KGEPIG 62




132|SequenceR|665|656|KSWKTASSKG

>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 1 KSWKTASSKG 10
KSW+ A+S+G
Sbjct: 52 KSWELATSEG 61


>sp|ARGDC_STAMF|ARGININE decarboxylase proenzyme|Staphylothermus marinus (strain ATCC

Query: 1 KSWKTASSKG 10
KSWK KG
Sbjct: 52 KSWKLGGEKG 61


>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 1 KSWKTASSKG 10
KSW A S+G
Sbjct: 51 KSWDLAKSEG 60


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 1 KSWKTASS 8
KSWKT+++
Sbjct: 203 KSWKTSNA 210


>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 2 SWKTASSKG 10
SW A+S+G
Sbjct: 53 SWNVAASEG 61




133|SequenceR|670|661|GATAEKSWKT

>sp|DCDB_NANEQ|DCTP deaminase, dUMP-forming|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GATAEKSWK 9
GAT+ + WK
Sbjct: 187 GATSSEIWK 195


>sp|Y1403_METJA|UNCHARACTERIZED protein MJ1403|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GATAEKSW 8
GAT++ SW
Sbjct: 236 GATSDSSW 243


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 ATAEKSWK 9
++AEK WK
Sbjct: 496 SSAEKLWK 503




134|SequenceR|675|666|SKSKKGATAE

>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 2 KSKKGAT 8
KSKKGAT
Sbjct: 221 KSKKGAT 227




135|SequenceR|680|671|KRLKGSKSKK

***** No hits found ******


136|SequenceR|685|676|KMNGKKRLKG

>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 MNGKKRLKG 10
+NGKKRL G
Sbjct: 252 INGKKRLMG 260


>sp|AKSA_METMA|HOMOCITRATE synthase AksA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KMNGKKRLKG 10
K GKK LKG
Sbjct: 336 KHTGKKALKG 345


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 MNGKKRLKG 10
++GKKR++G
Sbjct: 191 VSGKKRIRG 199


>sp|MFNA_METAC|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosarcina acetivorans

Query: 4 GKKRLKG 10
GKK LKG
Sbjct: 119 GKKELKG 125


>sp|Y3531_METJA|PUTATIVE antitoxin MJECL31|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KMNGKKRLK 9
K+ GKKRLK
Sbjct: 21 KIKGKKRLK 29




137|SequenceR|690|681|RTENIKMNGK

>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 3 ENIKMNG 9
ENIK+NG
Sbjct: 105 ENIKING 111


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 3 ENIKMNG 9
ENIK+NG
Sbjct: 105 ENIKING 111


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ENIKMNG 9
ENIK+NG
Sbjct: 74 ENIKVNG 80


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ENIKMN 8
ENIKMN
Sbjct: 249 ENIKMN 254


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 4 NIKMNGK 10
NI++NGK
Sbjct: 181 NIELNGK 187




138|SequenceR|695|686|ADMDERTENI

>sp|RS2_STAMF|SMALL ribosomal subunit protein uS2|Staphylothermus marinus (strain ATCC

Query: 1 ADMDERTENI 10
AD D RTE I
Sbjct: 160 ADTDNRTEYI 169


>sp|NADA_HALMA|QUINOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DMDERTENI 10
D DERTE I
Sbjct: 29 DADERTERI 37


>sp|RS2_HYPBU|SMALL ribosomal subunit protein uS2|Hyperthermus butylicus (strain DSM

Query: 2 DMDERTENI 10
D D R ENI
Sbjct: 156 DTDNRVENI 164


>sp|CBIA_ARCFU|COBYRINATE a,c-diamide synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DMDERTENI 10
DMDE +NI
Sbjct: 206 DMDELLDNI 214


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ADMDERTEN 9
ADM ERT++
Sbjct: 86 ADMIERTQD 94


>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain KIN4/I

Query: 2 DMDERTENI 10
D D +TEN+
Sbjct: 150 DTDNKTENV 158


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DMDERTENI 10
D+DE ENI
Sbjct: 37 DLDELKENI 45


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 ADMDERTENI 10
AD+D+R E++
Sbjct: 530 ADVDDRNESM 539


>sp|SYT_METTH|THREONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ADMDERTENI 10
AD+D+R+E +
Sbjct: 523 ADLDDRSETL 532


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 4 DERTENI 10
DER ENI
Sbjct: 300 DERVENI 306


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ADMDERTENI 10
AD+D+R E++
Sbjct: 522 ADVDDRDESV 531


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 DERTENI 10
DER ENI
Sbjct: 348 DERKENI 354




139|SequenceR|700|691|QELLQADMDE

>sp|RS19_PYRAE|SMALL ribosomal subunit protein uS19|Pyrobaculum aerophilum (strain

Query: 1 QELLQADMDE 10
+ELL MDE
Sbjct: 37 EELLNMSMDE 46




140|SequenceR|705|696|SNTSQQELLQ

***** No hits found ******


141|SequenceR|710|701|AEFESSNTSQ

>sp|NRDR_NATPD|TRANSCRIPTIONAL repressor NrdR|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EFESSNTSQ 10
+FE+SN+SQ
Sbjct: 154 DFEASNSSQ 162


>sp|NRDR_HALMD|TRANSCRIPTIONAL repressor NrdR|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 EFESSNTSQ 10
+FE+SN+SQ
Sbjct: 154 DFEASNSSQ 162


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 AEFESSNTSQ 10
AEFESS T +
Sbjct: 458 AEFESSITRE 467




142|SequenceR|715|706|DSLSPAEFES

>sp|RTCB_PYRAE|TRNA-SPLICING ligase RtcB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 LSPAEFE 9
LSP+EFE
Sbjct: 141 LSPSEFE 147


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 1 DSLSPAEFE 9
D L+PAEF+
Sbjct: 512 DWLNPAEFQ 520


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain Fusaro

Query: 3 LSPAEFE 9
+SPAEFE
Sbjct: 335 VSPAEFE 341


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 3 LSPAEFE 9
+SPAEFE
Sbjct: 335 VSPAEFE 341


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 3 LSPAEFE 9
+SPAEFE
Sbjct: 335 VSPAEFE 341


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SLSPAEF 8
SLSPAEF
Sbjct: 9 SLSPAEF 15


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSLSPAEF 8
D LSP EF
Sbjct: 386 DCLSPVEF 393


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DSLSPAEFES 10
D + P EF+S
Sbjct: 102 DEIGPMEFKS 111


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SLSPAEF 8
S+SPAEF
Sbjct: 8 SISPAEF 14


>sp|NTPTH_PYRFU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DSLSPAEFES 10
D + P EF+S
Sbjct: 105 DEIGPMEFKS 114


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 5 PAEFES 10
PAEFES
Sbjct: 30 PAEFES 35


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DSLSPAEFES 10
D+LS AEF++
Sbjct: 194 DTLSDAEFKA 203


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 1 DSLSPAEFES 10
DSL A+FES
Sbjct: 26 DSLLTADFES 35


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LSPAEFES 10
LSP EF S
Sbjct: 209 LSPVEFSS 216


>sp|AMPPA_METMA|AMP phosphorylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LSPAEFES 10
LSP EF S
Sbjct: 210 LSPVEFSS 217


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 2 SLSPAEF 8
S+SPAEF
Sbjct: 9 SISPAEF 15


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SLSPAEF 8
SL PAEF
Sbjct: 230 SLDPAEF 236




143|SequenceR|720|711|VSPMSDSLSP

>sp|RS4_HALWD|SMALL ribosomal subunit protein uS4|Haloquadratum walsbyi (strain DSM

Query: 2 SPMSDSLSP 10
SP++DSL P
Sbjct: 160 SPLADSLHP 168


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSPMSDSLSP 10
VSP++ SL P
Sbjct: 336 VSPLAQSLKP 345


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 3 PMSDSLSP 10
P+S SLSP
Sbjct: 10 PVSHSLSP 17


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 VSPMSDSLSP 10
+SP +D LSP
Sbjct: 310 MSPPTDCLSP 319


>sp|TOP6B_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VSPMSDSLSP 10
+SP +D LSP
Sbjct: 310 MSPPTDCLSP 319


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 1 VSPMSDSLSP 10
++P +D LSP
Sbjct: 501 IAPPTDCLSP 510




144|SequenceR|725|716|SHSDAVSPMS

***** No hits found ******


145|SequenceR|730|721|ESFHSSHSDA

>sp|RNZ_NANEQ|RIBONUCLEASE Z|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 ESFHSSHSDA 10
E +HS+ SDA
Sbjct: 236 EHYHSTISDA 245


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ESFHSSHSD 9
E F+ SH D
Sbjct: 376 EEFYKSHRD 384


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 HSSHSD 9
H SHSD
Sbjct: 235 HESHSD 240


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 1 ESFHSSHSDA 10
E+ HS+ SDA
Sbjct: 244 ETLHSTVSDA 253


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 ESFHSSHSDA 10
E F+S+ SDA
Sbjct: 498 EEFNSARSDA 507




146|SequenceR|735|726|DSCSFESFHS

>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 SFESFHS 10
SFE+FH+
Sbjct: 71 SFETFHA 77


>sp|Y1065_METJA|UNCHARACTERIZED protein MJ1065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSCSFESFHS 10
D+ F+S+H+
Sbjct: 47 DAIKFQSYHT 56


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 4 SFESFH 9
SF+SFH
Sbjct: 168 SFDSFH 173




147|SequenceR|740|731|KMSELDSCSF

>sp|TBP_CENSY|TATA-BOX-BINDING protein|Cenarchaeum symbiosum (strain A)

Query: 5 LDSCSF 10
LDSCSF
Sbjct: 142 LDSCSF 147


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 2 MSELDSCSF 10
+ ELD C+F
Sbjct: 362 VGELDGCNF 370


>sp|SURE1_PYRAE|5'-NUCLEOTIDASE SurE 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KMSELDSCSF 10
+M E+D C F
Sbjct: 52 RMYEVDLCGF 61


>sp|KAE1_CALMQ|TRNA N6-adenosine threonylcarbamoyltransferase|Caldivirga

Query: 1 KMSELDSCSF 10
K+S+LD+ +F
Sbjct: 66 KLSDLDAVAF 75


>sp|HDRD_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina mazei (strain

Query: 1 KMSELDSCS 9
++ ELDSC+
Sbjct: 17 QLMELDSCT 25


>sp|HDRD_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina acetivorans

Query: 1 KMSELDSCS 9
++ ELDSC+
Sbjct: 17 QLMELDSCT 25




148|SequenceR|745|736|HSCSTKMSEL

>sp|TOP6B_PYRAE|TYPE 2 DNA topoisomerase 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 408 HVCSTKI 414


>sp|TOP6B_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACS2|TYPE 2 DNA topoisomerase 6|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACI7|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACI6|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACI4|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACI3|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain M.16.27)

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACI2|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SACI1|TYPE 2 DNA topoisomerase 6|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKI 420


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKV 420


>sp|TOP6B_METS5|TYPE 2 DNA topoisomerase 6|Metallosphaera sedula (strain ATCC 51363

Query: 1 HSCSTKM 7
H CSTK+
Sbjct: 414 HLCSTKV 420




149|SequenceR|750|741|YDSSGHSCST

>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDSSGHSCS 9
YD+ GH C+
Sbjct: 268 YDALGHRCN 276


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 4 SGHSCST 10
SGH+C T
Sbjct: 194 SGHACGT 200




150|SequenceR|755|746|AFRTHYDSSG

>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 1 AFRTHYDSSG 10
+FR HY SG
Sbjct: 310 SFRYHYKKSG 319


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 AFRTHYD 7
AFR H+D
Sbjct: 109 AFRKHFD 115


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 AFRTHYD 7
AFR H+D
Sbjct: 109 AFRKHFD 115


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 FRTHYDS 8
+RTHY S
Sbjct: 2 YRTHYSS 8


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AFRTHYDSS 9
A+RT YD S
Sbjct: 329 AYRTDYDLS 337


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AFRTHYDSS 9
A+RT YD S
Sbjct: 327 AYRTDYDLS 335


>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 AFRTHYDSS 9
A+RT YD S
Sbjct: 329 AYRTDYDLS 337


>sp|TRUA_NATPD|TRNA pseudouridine synthase A|Natronomonas pharaonis (strain ATCC

Query: 1 AFRTHYDSSG 10
AFR YD +G
Sbjct: 3 AFRIAYDGTG 12


>sp|TPIS_PYRAE|TRIOSEPHOSPHATE isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 FRTHYDSSG 10
F+ +Y++SG
Sbjct: 10 FKAYYEASG 18




151|SequenceR|760|751|LINVTAFRTH

>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 INVTAFRTH 10
+NV A +TH
Sbjct: 17 VNVDALKTH 25




152|SequenceR|765|756|NEVEPLINVT

>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 EVEPLINVT 10
E+EP+I VT
Sbjct: 578 EIEPIIAVT 586


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 EVEPLINVT 10
E+EP++ VT
Sbjct: 579 EIEPIVAVT 587


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NEVEPLIN 8
NE+E LIN
Sbjct: 718 NEIEVLIN 725


>sp|RLME_ARCFU|RIBOSOMAL RNA large subunit methyltransferase|Archaeoglobus fulgidus

Query: 1 NEVEPLINVT 10
N ++PL NVT
Sbjct: 68 NPMKPLENVT 77


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EVEPLINVT 10
E++P +N+T
Sbjct: 1041 EIQPKVNIT 1049




153|SequenceR|770|761|NELRDNEVEP

>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NELRDNEVEP 10
NELR EV+P
Sbjct: 37 NELRTYEVDP 46


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NELRDNEVE 9
N+LRD++VE
Sbjct: 493 NKLRDSKVE 501


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 ELRDNEV 8
E+RDNEV
Sbjct: 1073 EIRDNEV 1079


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LRDNEVEP 10
+RDNEV P
Sbjct: 197 IRDNEVVP 204


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ELRDNEVEP 10
ELR N +EP
Sbjct: 15 ELRKNGIEP 23


>sp|RNH2_PICTO|RIBONUCLEASE HII|Picrophilus torridus (strain ATCC 700027

Query: 3 LRDNEVE 9
LRDNE+E
Sbjct: 141 LRDNEIE 147


>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 NELRDNEVE 9
EL DNE+E
Sbjct: 113 KELSDNEIE 121


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 NELRDNEVE 9
EL DNE+E
Sbjct: 113 KELSDNEIE 121


>sp|EF1B_ARCFU|ELONGATION factor 1-beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ELRDNEVEP 10
E+RD+ ++P
Sbjct: 35 EIRDSAIQP 43




154|SequenceR|775|766|CQHPSNELRD

>sp|Y037_METJA|UNCHARACTERIZED protein MJ0037|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QHPSNELRD 10
+HPS +LRD
Sbjct: 154 EHPSIKLRD 162


>sp|UREG_HALMA|UREASE accessory protein UreG|Haloarcula marismortui (strain ATCC 43049

Query: 2 QHPSNELRD 10
+H +NE+RD
Sbjct: 171 EHDANEVRD 179


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 HPSNELRD 10
HP EL+D
Sbjct: 359 HPMEELKD 366


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 1 CQHPSNEL 8
C H +NEL
Sbjct: 102 CSHNANEL 109


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 2 QHPSNELRD 10
QHP+ +RD
Sbjct: 241 QHPNPAIRD 249


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 QHPSNEL 8
+HP NEL
Sbjct: 437 RHPENEL 443


>sp|Y1680_ARCFU|UNCHARACTERIZED protein AF_1680|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CQHPSNELRD 10
C HPS+ D
Sbjct: 163 CAHPSDYFPD 172


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 HPSNELRD 10
HP++ LRD
Sbjct: 229 HPASVLRD 236


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QHPSNELRD 10
+HP+ LRD
Sbjct: 251 RHPNPSLRD 259




155|SequenceR|780|771|VVSISCQHPS

>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VVSISCQHPS 10
++SIS HPS
Sbjct: 100 ILSISVHHPS 109


>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 2 VSISCQHPS 10
VS SC HP+
Sbjct: 63 VSGSCSHPT 71


>sp|DCD_NATPD|DCTP deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SISCQHPS 10
+ISC HP+
Sbjct: 49 NISCIHPT 56


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 2 VSISCQHPS 10
V+ SC HP+
Sbjct: 63 VTGSCSHPT 71


>sp|CBIM2_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum

Query: 2 VSISCQHPS 10
V+ SC HP+
Sbjct: 63 VTGSCSHPT 71


>sp|RS4_KORCO|SMALL ribosomal subunit protein uS4|Korarchaeum cryptofilum (strain OPF8)

Query: 4 ISCQHPS 10
I C HPS
Sbjct: 151 IECLHPS 157


>sp|CBIM2_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 VSISCQHPS 10
V+ SC HP+
Sbjct: 63 VTGSCSHPT 71


>sp|DCD_HALWD|DCTP deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SISCQHPS 10
+ISC HP+
Sbjct: 49 NISCIHPN 56


>sp|CBIM_ARCFU|PUTATIVE cobalt transport protein CbiM|Archaeoglobus fulgidus (strain ATCC

Query: 2 VSISCQHPS 10
V+ SC HP+
Sbjct: 63 VTGSCSHPT 71


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 2 VSISCQHPS 10
V+ SC HP+
Sbjct: 63 VTGSCSHPT 71


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VVSISCQH 8
++SISC H
Sbjct: 361 LLSISCYH 368




156|SequenceR|785|776|SATQTVVSIS

***** No hits found ******


157|SequenceR|790|781|SVESCSATQT

>sp|GGR1_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 VESCSATQ 9
VESC AT+
Sbjct: 246 VESCPATR 253




158|SequenceR|795|786|IHNLQSVESC

***** No hits found ******


159|SequenceR|800|791|GHEEAIHNLQ

>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HEEAIHNLQ 10
H++AI NL+
Sbjct: 37 HQQAIENLE 45


>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 EEAIHNLQ 10
+EA+H+LQ
Sbjct: 217 KEALHDLQ 224


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 2 HEEAIHNLQ 10
+E IHN+Q
Sbjct: 629 YEAGIHNVQ 637


>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 GHEEAI 6
GHEEAI
Sbjct: 73 GHEEAI 78


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 1 GHEEAI 6
GHEEAI
Sbjct: 73 GHEEAI 78


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 610 HEDAIH 615


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 592 HEDAIH 597


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain

Query: 1 GHEEAIHNL 9
G EEA+H L
Sbjct: 49 GGEEALHRL 57


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 592 HEDAIH 597


>sp|ACYP_SULAC|ACYLPHOSPHATASE acidocaldarius (strain ATCC 33909

Query: 1 GHEEAIHNL 9
G+EEA++ L
Sbjct: 51 GYEEALYKL 59


>sp|KADA_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 GHEEAIHNL 9
G EEA+H L
Sbjct: 176 GLEEAVHEL 184


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 597 HEDAIH 602


>sp|EF2_METB6|ELONGATION factor 2|Methanoregula boonei (strain DSM 21154

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 592 HEDAIH 597


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 591 HEDAIH 596


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 598 HEDAIH 603


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 598 HEDAIH 603


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 591 HEDAIH 596


>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 598 HEDAIH 603


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 591 HEDAIH 596


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 598 HEDAIH 603


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 591 HEDAIH 596


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 598 HEDAIH 603


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 HEEAIH 7
HE+AIH
Sbjct: 598 HEDAIH 603


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HEEAIH 7
HE+A+H
Sbjct: 591 HEDAVH 596


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HEEAIH 7
HE+A+H
Sbjct: 589 HEDAVH 594




160|SequenceR|805|796|KIGNNGHEEA

>sp|PSB2_SULTO|PROTEASOME subunit beta 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KIGNNGHEE 9
KI NGHEE
Sbjct: 190 KITKNGHEE 198


>sp|PSB2_SULAC|PROTEASOME subunit beta 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KIGNNGHEE 9
KI NGHEE
Sbjct: 187 KITKNGHEE 195


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 1 KIGNNGHE 8
KIGNNG E
Sbjct: 267 KIGNNGDE 274


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IGNNGHEEA 10
I NNGH EA
Sbjct: 317 ITNNGHAEA 325


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 1 KIGNNGHE 8
KIG+NG E
Sbjct: 271 KIGDNGAE 278


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 1 KIGNNGHE 8
KIG+NG E
Sbjct: 275 KIGDNGAE 282


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain DSM

Query: 1 KIGNNGHE 8
KIG+NG E
Sbjct: 271 KIGDNGAE 278


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 IGNNGHEEA 10
+ N+GH+EA
Sbjct: 61 LDNSGHQEA 69


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 1 KIGNNGHE 8
KIG NG E
Sbjct: 271 KIGENGAE 278


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 1 KIGNNGHE 8
KIG NG E
Sbjct: 271 KIGENGAE 278


>sp|RL3_ARCFU|LARGE ribosomal subunit protein uL3|Archaeoglobus fulgidus (strain ATCC

Query: 1 KIGNNGHE 8
KIG NG E
Sbjct: 263 KIGENGEE 270


>sp|MDH_METMP|MALATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KIGNNGHEEA 10
K+G NG EE
Sbjct: 275 KVGKNGIEEV 284


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IGNNGHEE 9
+ NN HEE
Sbjct: 435 LSNNTHEE 442


>sp|Y263_METJA|TPR repeat-containing protein MJ0263|Methanocaldococcus jannaschii

Query: 2 IGNNGHEEA 10
+ NN +EEA
Sbjct: 227 LANNNYEEA 235


>sp|MDH_HALVD|MALATE dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 1 KIGNNGHEE 9
K+G+NG EE
Sbjct: 267 KLGSNGIEE 275


>sp|Y533_PYRHO|UNCHARACTERIZED protein PH0533|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GNNGHEEA 10
GN G EEA
Sbjct: 101 GNEGREEA 108


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 IGNNGHEE 9
+ NN HEE
Sbjct: 434 LSNNTHEE 441


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGNNGHEE 9
+ NN HEE
Sbjct: 434 LSNNTHEE 441


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KIGNNGHEE 9
KIGNN ++E
Sbjct: 178 KIGNNDNKE 186




161|SequenceR|810|801|LDVNPKIGNN

>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 1 LDVNPKIGNN 10
LDV+P++GNN
Sbjct: 99 LDVHPEVGNN 108


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LDVNPKIGNN 10
LD +P++GNN
Sbjct: 99 LDAHPEVGNN 108


>sp|IF2A_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 LDVNPKIGN 9
LDVNPK G+
Sbjct: 74 LDVNPKRGH 82


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 2 DVNPKIGN 9
DV PK GN
Sbjct: 358 DVEPKAGN 365


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DVNPKIGN 9
DV+PK+ N
Sbjct: 124 DVSPKLSN 131


>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 NPKIGNN 10
+PKIG+N
Sbjct: 285 HPKIGSN 291


>sp|HMGCS_HALVD|HYDROXYMETHYLGLUTARYL-COA synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 LDVNPKIGN 9
LD++ ++GN
Sbjct: 320 LDISSRVGN 328


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VNPKIGNN 10
++PK+G N
Sbjct: 335 ISPKLGEN 342


>sp|Y911_METJA|MAGNESIUM-CHELATASE subunit ChlI homolog|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VNPKIG 8
+NPKIG
Sbjct: 28 INPKIG 33


>sp|SYFB_METMA|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDVNPKIGNN 10
LD+N IG N
Sbjct: 535 LDLNDLIGKN 544




162|SequenceR|815|806|ADGFYLDVNP

>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DGFYLDVN 9
+G YLDVN
Sbjct: 245 EGLYLDVN 252


>sp|PCNA_THEVO|DNA polymerase sliding clamp|Thermoplasma volcanium (strain ATCC 51530

Query: 4 FYLDVNP 10
FYLD NP
Sbjct: 224 FYLDQNP 230


>sp|PCNA_THEAC|DNA polymerase sliding clamp|Thermoplasma acidophilum (strain ATCC

Query: 4 FYLDVNP 10
FYLD NP
Sbjct: 224 FYLDQNP 230


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DGFYLDVN 9
+G YLDVN
Sbjct: 245 EGLYLDVN 252


>sp|VAPC6_METJA|RIBONUCLEASE VapC6|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGFYLDVNP 10
DGF L +NP
Sbjct: 33 DGFMLCINP 41


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 YLDVNP 10
YLD+NP
Sbjct: 19 YLDINP 24


>sp|EF2_METRM|ELONGATION factor 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 4 FYLDVNP 10
FY+DV P
Sbjct: 489 FYIDVQP 495


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 DGFYLDVNP 10
DGF+++ +P
Sbjct: 517 DGFFMEAHP 525


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ADGFYLDV 8
A GFYL+V
Sbjct: 294 ATGFYLEV 301


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGFYLDVNP 10
DG Y DV P
Sbjct: 163 DGGYFDVEP 171


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 DGFYLDVNP 10
DG Y+DV P
Sbjct: 200 DGPYVDVTP 208


>sp|EF2_METST|ELONGATION factor 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 FYLDVNP 10
FY+D+ P
Sbjct: 488 FYIDIEP 494


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DGFYLDVN 9
D FYLDV+
Sbjct: 163 DIFYLDVD 170


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DGFYLDVN 9
DGFY+ N
Sbjct: 94 DGFYVTTN 101


>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 1 ADGFYLDVNP 10
ADG + VNP
Sbjct: 137 ADGLIVVVNP 146


>sp|CETZ_THEKO|TUBULIN-LIKE protein CetZ|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ADGFYLDVN 9
++G YLD N
Sbjct: 244 SEGLYLDAN 252


>sp|FEN_KORCO|FLAP endonuclease 1|Korarchaeum cryptofilum (strain OPF8)

Query: 5 YLDVNP 10
Y+D+NP
Sbjct: 203 YVDINP 208


>sp|PROF_THOAA|THOR profilin|Thorarchaeota archaeon (strain AB_25)

Query: 2 DGFYLDVN 9
DG Y+DV+
Sbjct: 111 DGVYVDVD 118


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ADGFYL 6
ADG+YL
Sbjct: 222 ADGYYL 227


>sp|Y959_METJA|UNCHARACTERIZED aminotransferase MJ0959|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GFYLDV 8
GFYLD+
Sbjct: 223 GFYLDL 228


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 4 FYLDVNP 10
FY +VNP
Sbjct: 339 FYQEVNP 345


>sp|SYY_THEVO|TYROSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DGFYLDVN 9
D FYLDV+
Sbjct: 162 DIFYLDVD 169


>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGFYLDV 8
DGFY+++
Sbjct: 22 DGFYINI 28


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DGFYLDVN 9
DG LDVN
Sbjct: 45 DGIMLDVN 52


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DGFYLDV 8
DGFY D+
Sbjct: 102 DGFYYDI 108


>sp|Y7SR_METFE|UNCHARACTERIZED 28.5 kDa protein in|Methanothermus fervidus

Query: 3 GFYLDVN 9
G Y+DVN
Sbjct: 83 GIYVDVN 89


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 2 DGFYLD 7
DGFYL+
Sbjct: 50 DGFYLE 55


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 DGFYLDVN 9
DG +LD+N
Sbjct: 315 DGIWLDMN 322


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 DGFYLDVN 9
DG +LD+N
Sbjct: 315 DGIWLDMN 322


>sp|CETZ_PYRAB|TUBULIN-LIKE protein CetZ|Pyrococcus abyssi (strain GE5 /

Query: 2 DGFYLDVN 9
+G YLDV+
Sbjct: 245 EGLYLDVS 252


>sp|SYY_PICTO|TYROSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DGFYLDVN 9
D FYLDV+
Sbjct: 164 DIFYLDVD 171


>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 3 GFYLDVN 9
G++LD+N
Sbjct: 201 GYFLDIN 207




163|SequenceR|820|811|NTEKLADGFY

>sp|FOLD_METB6|BIFUNCTIONAL protein FolD|Methanoregula boonei (strain DSM 21154

Query: 1 NTEKLADGFY 10
NTEK DGF+
Sbjct: 110 NTEKDVDGFH 119


>sp|FPRA_METTH|COENZYME F420H(2) oxidase|Methanothermobacter thermautotrophicus (strain

Query: 1 NTEKLADGFY 10
EK+ADG Y
Sbjct: 4 RAEKIADGLY 13


>sp|HIS5_PYRAE|IMIDAZOLE glycerol phosphate synthase subunit|Pyrobaculum aerophilum (strain

Query: 1 NTEKLADGFY 10
N+E +A+G+Y
Sbjct: 119 NSEIIAEGYY 128


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NTEKLADG 8
N EKL DG
Sbjct: 724 NVEKLQDG 731


>sp|HEM4_ARCFU|PUTATIVE uroporphyrinogen-III synthase|Archaeoglobus fulgidus (strain ATCC

Query: 3 EKLADGFY 10
EK+ +GFY
Sbjct: 150 EKVREGFY 157


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NTEKLADG 8
N EKL DG
Sbjct: 728 NVEKLQDG 735


>sp|Y1484_METJA|UNCHARACTERIZED protein MJ1484|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EKLADGFY 10
E LAD FY
Sbjct: 84 ESLADKFY 91


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 NTEKLADG 8
NTE++ DG
Sbjct: 739 NTERIQDG 746


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 TEKLADG 8
TEKL DG
Sbjct: 35 TEKLIDG 41




164|SequenceR|825|816|HSHNNNTEKL

>sp|MPTE_PYRFU|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HSHNNNTEKL 10
H+H +N +KL
Sbjct: 121 HAHGDNMDKL 130


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HSHNNNTEKL 10
H+H +N EK+
Sbjct: 127 HAHGDNIEKI 136


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HSHNNNTEKL 10
H + NN +KL
Sbjct: 387 HIYTNNVDKL 396


>sp|Y880_METJA|UNCHARACTERIZED protein MJ0880|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NNNTEKL 10
NNN EK+
Sbjct: 151 NNNNEKI 157


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 HSHNNNTEKL 10
H+H NN L
Sbjct: 122 HAHGNNLPAL 131


>sp|ASSY_THEAC|ARGININOSUCCINATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HSHNNN 6
HSHN N
Sbjct: 383 HSHNRN 388


>sp|TYW2_PYRHO|TRNA(PHE) (4-demethylwyosine(37)-C(7))

Query: 1 HSHNNNTEKL 10
H HN EKL
Sbjct: 222 HYHNTVPEKL 231




165|SequenceR|830|821|LEMTQHSHNN

>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 EMTQHSHN 9
E+ Q+SHN
Sbjct: 552 EVNQYSHN 559


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 1 LEMTQHSH 8
L +T+HSH
Sbjct: 289 LGITEHSH 296




166|SequenceR|838|826|IETQIAVKLEMTQ

>sp|GGR_METMP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain DSM 14266

Query: 3 TQIAVKLEMTQ 13
TQIAVK +T+
Sbjct: 114 TQIAVKSRVTK 124


>sp|GGR_METM6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C6 /

Query: 3 TQIAVKLEMTQ 13
TQIAVK +T+
Sbjct: 114 TQIAVKSRVTK 124


>sp|HIS7_PYRAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IETQIAVKL 9
+ET+IAV+L
Sbjct: 7 LETEIAVEL 15


>sp|HIS7_METS5|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 2 ETQIAVKLEM 11
ET++ VKLE+
Sbjct: 13 ETKVQVKLEL 22


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 3 TQIAVKLEMT 12
TQIAVK +T
Sbjct: 114 TQIAVKSRVT 123


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 3 TQIAVKLEMT 12
TQIAVK +T
Sbjct: 114 TQIAVKSRVT 123


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ETQIAVKLE 10
++Q+AVK+E
Sbjct: 224 QSQVAVKIE 232




THE END