RN19A_HUMAN Blast Output
Archaea
1|Sequence|1|10|MQEQEIGFIS

>sp|EF1B_CALMQ|ELONGATION factor 1-beta|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 MQEQEIGF 8
++E+EIGF
Sbjct: 39 IEEEEIGF 46




2|Sequence|6|15|IGFISKYNEG

>sp|NADE_HYPBU|NH(3)-DEPENDENT NAD(+) synthetase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IGFISKYNEG 10
IG+ +KY +G
Sbjct: 151 IGYFTKYGDG 160


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IGFISKYNEG 10
+ +ISKY EG
Sbjct: 293 VEYISKYTEG 302


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 IGFISKYNEG 10
+ +ISKY EG
Sbjct: 293 VEYISKYTEG 302


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IGFISKYNEG 10
+ +ISKY EG
Sbjct: 293 VEYISKYTEG 302


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IGFISKYNEG 10
+ +ISKY EG
Sbjct: 293 VEYISKYTEG 302


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 IGFISKYNEG 10
+ +ISKY EG
Sbjct: 293 VEYISKYTEG 302


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 IGFISKYNEG 10
+ +ISKY EG
Sbjct: 293 VEYISKYTEG 302


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IGFISKYNE 9
+GFI YN+
Sbjct: 236 VGFIESYND 244


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 GFISKYNEG 10
GF+ KY EG
Sbjct: 45 GFMHKYAEG 53


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 GFISKYNEG 10
GF+ KY EG
Sbjct: 47 GFMHKYAEG 55


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 GFISKYNEG 10
GF+ KY EG
Sbjct: 47 GFMHKYAEG 55


>sp|GLYA_PYRAB|SERINE hydroxymethyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 GFISKYNEG 10
GF+ KY EG
Sbjct: 45 GFMHKYAEG 53


>sp|GLYA_PYRHO|SERINE hydroxymethyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 2 GFISKYNEG 10
GF+ KY EG
Sbjct: 45 GFMHKYAEG 53


>sp|GLYA_PYRFU|SERINE hydroxymethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GFISKYNEG 10
GF+ KY EG
Sbjct: 45 GFMHKYAEG 53


>sp|Y1811_METBU|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcoides

Query: 4 ISKYNEG 10
ISKY EG
Sbjct: 157 ISKYEEG 163


>sp|GGGPS_METS5|GERANYLGERANYLGLYCERYL phosphate synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 IGFISKYNE 9
+ F+SKY+E
Sbjct: 191 VKFVSKYSE 199


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 145 LGYFTKYGDG 154


>sp|NADE_ARCFU|NH(3)-DEPENDENT NAD(+) synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 140 VGYFTKYGDG 149


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 150 LGYFTKYGDG 159


>sp|NADE_PYRAE|NH(3)-DEPENDENT NAD(+) synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 151 LGYFTKYGDG 160


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 3 FISKYNE 9
FISKY+E
Sbjct: 66 FISKYDE 72


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain ATCC

Query: 1 IGFISKYNEG 10
+GF+ K EG
Sbjct: 106 LGFVKKTREG 115


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 137 LGYFTKYGDG 146


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 3 FISKYNE 9
F+SKY E
Sbjct: 458 FVSKYRE 464


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IGFISKYN 8
I FI+KYN
Sbjct: 463 IKFINKYN 470


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 1 IGFISKYNEG 10
IG+ +KY +G
Sbjct: 152 IGYFTKYGDG 161


>sp|NADE_PICTO|NH(3)-DEPENDENT NAD(+) synthetase|Picrophilus torridus (strain ATCC 700027

Query: 1 IGFISKYNEG 10
IG+ +KY +G
Sbjct: 138 IGYFTKYGDG 147


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 142 LGYFTKYGDG 151


>sp|NADE_METMA|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 143 LGYYTKYGDG 152


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IGFISKYNEG 10
+G+ +KY +G
Sbjct: 143 LGYYTKYGDG 152


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IGFISKYNE 9
IG+I KY +
Sbjct: 535 IGYIPKYKD 543




3|Sequence|11|20|KYNEGLCVNT

>sp|PYRH_METMJ|URIDYLATE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 EGLCVNT 10
EG+CV T
Sbjct: 216 EGVCVGT 222




4|Sequence|16|25|LCVNTDPVSI

>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LCVNTDPVSI 10
LCV +PV++
Sbjct: 93 LCVGAEPVAL 102


>sp|SPCS_METMP|O-PHOSPHOSERYL-TRNA(SEC) selenium transferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LCVNTDPVSI 10
+ VN+DPV I
Sbjct: 368 ISVNSDPVEI 377


>sp|RIBB_METMA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LCVNTDPVS 9
+CV DPV+
Sbjct: 67 ICVAVDPVA 75


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 LCVNTDPVS 9
+CV DPV+
Sbjct: 67 ICVAVDPVA 75


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LCVNTDPVSI 10
LCV +P+++
Sbjct: 93 LCVGAEPIAL 102


>sp|Y077_METJA|UNCHARACTERIZED protein MJ0077|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LCVNTDP 7
+C+NT P
Sbjct: 346 ICINTKP 352


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LCVNTDPVSI 10
LCV +P+++
Sbjct: 88 LCVGAEPIAL 97


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LCVNTDPVSI 10
+CV +PV++
Sbjct: 92 ICVGAEPVAL 101


>sp|THIM_METBF|HYDROXYETHYLTHIAZOLE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 VNTDPVSI 10
+N DPV I
Sbjct: 140 INADPVKI 147


>sp|PUR5_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LCVNTDPVSI 10
+CV +P+++
Sbjct: 92 ICVGAEPIAL 101


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LCVNTDPVSI 10
+C+ +PV++
Sbjct: 89 ICIGAEPVAL 98


>sp|PUR5_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LCVNTDPVSI 10
+C+ +PV++
Sbjct: 89 ICIGAEPVAL 98


>sp|PUR5_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C7 /

Query: 1 LCVNTDPVSI 10
+C+ +PV++
Sbjct: 89 ICIGAEPVAL 98


>sp|PUR5_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LCVNTDPVSI 10
+C+ +PV++
Sbjct: 89 ICIGAEPVAL 98


>sp|PUR5_METM6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus maripaludis (strain C6 /

Query: 1 LCVNTDPVSI 10
+C+ +PV++
Sbjct: 89 ICIGAEPVAL 98


>sp|PMDHS_METTH|PHOSPHOMEVALONATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 LCVNTDPV 8
+C+N +P+
Sbjct: 83 ICLNAEPI 90




5|Sequence|21|30|DPVSILTSIL

>sp|MDH_METST|MALATE dehydrogenase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DPVSILTSI 9
+PV ++TSI
Sbjct: 123 NPVDVMTSI 131




6|Sequence|26|35|LTSILDMSLH

>sp|NEP1_SULTO|RIBOSOMAL RNA small subunit methyltransferase|Sulfurisphaera tokodaii

Query: 3 SILDMSLH 10
+ILD+SLH
Sbjct: 39 TILDISLH 46


>sp|NEP1_METTP|RIBOSOMAL RNA small subunit methyltransferase|Methanothrix thermoacetophila

Query: 3 SILDMSLH 10
SILD SLH
Sbjct: 38 SILDASLH 45


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 LTSILDMSLH 10
+T LDM++H
Sbjct: 145 VTDSLDMNIH 154


>sp|NEP1_STAMF|RIBOSOMAL RNA small subunit methyltransferase|Staphylothermus marinus

Query: 3 SILDMSLH 10
++LD+SLH
Sbjct: 43 TLLDVSLH 50




7|Sequence|31|40|DMSLHRQMGS

>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DMSLHRQM 8
DMSL RQM
Sbjct: 291 DMSLVRQM 298


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DMSLHRQM 8
DMSL RQM
Sbjct: 291 DMSLVRQM 298


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DMSLHRQM 8
DMSL RQM
Sbjct: 291 DMSLVRQM 298


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DMSLHRQM 8
DMSL RQM
Sbjct: 291 DMSLVRQM 298


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DMSLHRQM 8
DMSL RQM
Sbjct: 291 DMSLVRQM 298


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DMSLHRQM 8
DMSL RQM
Sbjct: 291 DMSLVRQM 298


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 MSLHRQMG 9
MSL++Q+G
Sbjct: 1547 MSLYKQLG 1554


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MSLHRQMG 9
MSL++Q+G
Sbjct: 1228 MSLYKQLG 1235


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MSLHRQMG 9
MSL++Q+G
Sbjct: 1063 MSLYKQLG 1070


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 MSLHRQMG 9
MSL++Q+G
Sbjct: 1250 MSLYKQLG 1257


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DMSLHRQMGS 10
D +H+Q GS
Sbjct: 76 DKEVHKQFGS 85




8|Sequence|36|45|RQMGSDRDLQ

>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 2 QMGSDRDL 9
QMGS+R L
Sbjct: 318 QMGSERKL 325


>sp|PURE_PYRHO|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 MGSDRDL 9
MGSD DL
Sbjct: 16 MGSDSDL 22


>sp|PURE_PYRAB|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus abyssi (strain GE5 /

Query: 3 MGSDRDL 9
MGSD DL
Sbjct: 13 MGSDSDL 19


>sp|Y284_METJA|UNCHARACTERIZED protein MJ0284|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MGSDRDLQ 10
+G DRDL+
Sbjct: 115 LGEDRDLK 122


>sp|ADHS2_ARCFU|PUTATIVE 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase

Query: 2 QMGSDRDL 9
+MGSD D+
Sbjct: 205 KMGSDEDI 212


>sp|CAS2_NANEQ|CRISPR-ASSOCIATED endoribonuclease Cas2|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 MGSDRDLQ 10
+G D+DLQ
Sbjct: 82 LGEDKDLQ 89


>sp|MOBA_METTH|PROBABLE molybdenum cofactor guanylyltransferase|Methanothermobacter

Query: 1 RQMGSDRDL 9
R+MGSD+ L
Sbjct: 16 RRMGSDKGL 24




9|Sequence|41|50|DRDLQSSASS

***** No hits found ******


10|Sequence|46|55|SSASSVSLPS

***** No hits found ******


11|Sequence|51|60|VSLPSVKKAP

***** No hits found ******


12|Sequence|56|65|VKKAPKKRRI

>sp|Y121_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VKKAPKKRRI 10
+++ PKKRRI
Sbjct: 74 MRRDPKKRRI 83


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 VKKAPKK 7
VKK PKK
Sbjct: 221 VKKIPKK 227


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKKAPKKRR 9
+KK+P+K R
Sbjct: 250 IKKSPRKAR 258


>sp|COFH_METVS|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus vannielii (strain ATCC

Query: 1 VKKAPKKR 8
V K PKKR
Sbjct: 344 VNKIPKKR 351


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 3 KAPKKRRI 10
K+P++RRI
Sbjct: 270 KSPRRRRI 277




13|Sequence|61|70|KKRRISIGSL

>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 1 KKRRISIG 8
K+RR++IG
Sbjct: 130 KRRRVAIG 137


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KRRISIGSL 10
KRRI +GS
Sbjct: 347 KRRIMLGSF 355


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 2 KRRISIGS 9
KRRI +GS
Sbjct: 334 KRRIMLGS 341


>sp|SRP54_AERPE|SIGNAL recognition particle 54 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 3 RRISIGS 9
RRI+IGS
Sbjct: 397 RRIAIGS 403


>sp|PFDA_THEVO|PREFOLDIN subunit alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KKRRISIGS 9
K+R IS+GS
Sbjct: 49 KERLISVGS 57




14|Sequence|66|75|SIGSLFRRKK

>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 GSLFRRKK 10
G +FRRKK
Sbjct: 243 GIIFRRKK 250


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GSLFRRKK 10
G +FRRKK
Sbjct: 242 GIVFRRKK 249


>sp|Y933_METJA|UNCHARACTERIZED membrane protein MJ0933|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IGSLFRRK 9
+G+LF RK
Sbjct: 204 VGALFERK 211


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 SIGSLFRRKK 10
S+G+LF R++
Sbjct: 179 SMGTLFSRRR 188


>sp|Y1051_METJA|UNCHARACTERIZED protein MJ1051|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SIGSLFRR 8
S+G +FRR
Sbjct: 60 SVGGVFRR 67


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus (strain

Query: 1 SIGSLFRRK 9
S+G +FRR+
Sbjct: 370 SVGRVFRRE 378




15|Sequence|71|80|FRRKKDNKRK

>sp|RTCA_METAC|RNA 3'-terminal phosphate cyclase|Methanosarcina acetivorans (strain

Query: 1 FRRKKDNKR 9
FRR K+N+R
Sbjct: 178 FRRVKENRR 186


>sp|KADA_SACI7|ADENYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RRKKDNKR 9
R+K+DN R
Sbjct: 133 RQKRDNSR 140


>sp|KADA_SACI6|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RRKKDNKR 9
R+K+DN R
Sbjct: 133 RQKRDNSR 140


>sp|KADA_SACI4|ADENYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RRKKDNKR 9
R+K+DN R
Sbjct: 133 RQKRDNSR 140


>sp|KADA_SACI3|ADENYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 RRKKDNKR 9
R+K+DN R
Sbjct: 133 RQKRDNSR 140


>sp|KADA_SACI2|ADENYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RRKKDNKR 9
R+K+DN R
Sbjct: 133 RQKRDNSR 140


>sp|KADA_SACI1|ADENYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RRKKDNKR 9
R+K+DN R
Sbjct: 133 RQKRDNSR 140


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 2 RRKKDNKRK 10
RR+K+N RK
Sbjct: 171 RRRKENFRK 179




16|Sequence|76|85|DNKRKSRELN

***** No hits found ******


17|Sequence|81|90|SRELNGGVDG

>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ELNGGVDG 10
E++GGVDG
Sbjct: 286 EVHGGVDG 293


>sp|DNAG_PYRCJ|DNA primase DnaG|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 ELNGGVD 9
E+NGGVD
Sbjct: 17 EVNGGVD 23


>sp|MTAD_NATPD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SRELNGGVDG 10
+REL+G DG
Sbjct: 164 ARELDGAADG 173


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RELNGGV 8
RE+NGGV
Sbjct: 173 REINGGV 179


>sp|RFRNP_HALVD|RNA-FREE ribonuclease P|Haloferax volcanii (strain ATCC 29605

Query: 1 SRELNGGV 8
+RELN GV
Sbjct: 172 ARELNAGV 179


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 RELNGGVDG 10
R ++GGV+G
Sbjct: 162 RAISGGVEG 170


>sp|MTD_METLZ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocorpusculum

Query: 1 SRELNGGVDG 10
+REL G DG
Sbjct: 248 ARELEKGCDG 257


>sp|TRPE1_HALSA|ANTHRANILATE synthase component 1 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 SRELNGGVD 9
+REL+G +D
Sbjct: 275 TRELDGDID 283


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 RELNGGVDG 10
R ++GG++G
Sbjct: 162 RAISGGIEG 170


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 3 ELNGGVDG 10
E+N G DG
Sbjct: 163 EINNGADG 170


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM 5456

Query: 3 ELNGGVDG 10
E++GG++G
Sbjct: 116 EVDGGIEG 123


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 1 SRELNGGVDG 10
+R +NG +DG
Sbjct: 134 TRIINGEIDG 143


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SRELNGGVDG 10
+R+L+G DG
Sbjct: 166 ARKLDGAADG 175


>sp|HEM1_HYPBU|GLUTAMYL-TRNA reductase|Hyperthermus butylicus (strain DSM 5456

Query: 1 SRELNGGVDG 10
+RE GG DG
Sbjct: 163 AREAAGGFDG 172




18|Sequence|86|95|GGVDGIASIE

>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GGVDGI 6
GGVDGI
Sbjct: 35 GGVDGI 40


>sp|NRPR1_METMA|GLOBAL nitrogen regulator NrpRI|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGVDGIASIE 10
GG++GI ++E
Sbjct: 291 GGINGICALE 300


>sp|THIE_PYRFU|THIAMINE-PHOSPHATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GVDGIASI 9
GVDGIA I
Sbjct: 175 GVDGIAVI 182


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GVDGIAS 8
G+DGIAS
Sbjct: 443 GIDGIAS 449


>sp|Y1629_PYRAE|UPF0200 protein PAE1629|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VDGIASIE 10
+DGI SIE
Sbjct: 79 IDGIRSIE 86


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 2 GVDGIASIE 10
GVD + S+E
Sbjct: 83 GVDSVTSVE 91




19|Sequence|91|100|IASIESIHSE

>sp|KTHY_PYRHO|PROBABLE thymidylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IASIESIHSE 10
++SIE IHS+
Sbjct: 184 LSSIEDIHSD 193


>sp|KTHY_THEON|PROBABLE thymidylate kinase|Thermococcus onnurineus (strain NA1)

Query: 1 IASIESIHSE 10
+AS+E IH++
Sbjct: 184 LASVEDIHND 193




20|Sequence|96|105|SIHSEMCTDK

>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SIHSEMCTDK 10
++ MCTDK
Sbjct: 231 ALSGNMCTDK 240


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 1 SIHSEMC 7
SIH E C
Sbjct: 265 SIHGEQC 271


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 3 HSEMCTD 9
H E CTD
Sbjct: 341 HPERCTD 347


>sp|HMDH_HALS3|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Halobacterium salinarum (strain ATCC 29341

Query: 1 SIHSEMCTDK 10
++ +CTDK
Sbjct: 221 AVSGNLCTDK 230


>sp|Y1304_METJA|PUTATIVE toxin MJ1304|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HSEMCTDK 10
HS+ C +K
Sbjct: 40 HSQQCVEK 47




21|Sequence|101|110|MCTDKNSIFS

>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CTDKNSIFS 10
C D N IFS
Sbjct: 665 CLDCNKIFS 673


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 MCTDK 5
MCTDK
Sbjct: 236 MCTDK 240


>sp|PCNA_METLZ|DNA polymerase sliding clamp|Methanocorpusculum labreanum (strain ATCC

Query: 2 CTDKNSIFS 10
C D S+FS
Sbjct: 188 CADARSLFS 196




22|Sequence|106|115|NSIFSTNTSS

>sp|RN393_SACS2|CRISPR system ring nuclease SSO1393|Saccharolobus solfataricus (strain

Query: 3 IFSTNTSS 10
++STNTS+
Sbjct: 94 LYSTNTSN 101




23|Sequence|111|120|TNTSSDNGLT

>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NTSSDNGLT 10
N + DNGLT
Sbjct: 246 NQAMDNGLT 254




24|Sequence|116|125|DNGLTSISKQ

>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DNGLTS 6
DNGLTS
Sbjct: 250 DNGLTS 255




25|Sequence|121|130|SISKQIGDFI

>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 ISKQIGDFI 10
I K++GDF+
Sbjct: 97 IRKEVGDFV 105


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SISKQIGDFI 10
SISK GDF+
Sbjct: 1265 SISKNEGDFL 1274


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 3 SKQIGDFI 10
S Q+GDF+
Sbjct: 463 SSQVGDFL 470


>sp|RS6E_ARCFU|SMALL ribosomal subunit protein eS6|Archaeoglobus fulgidus (strain ATCC

Query: 2 ISKQIGDFI 10
I KQIGD I
Sbjct: 29 IGKQIGDVI 37


>sp|Y224_METKA|UPF0284 protein MK0224|Methanopyrus kandleri (strain AV19 /

Query: 1 SISKQIGDFI 10
S+ +Q+GD++
Sbjct: 304 SLFRQVGDYV 313


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 1 SISKQIGDFI 10
S+SK IGD I
Sbjct: 129 SLSKLIGDII 138


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 SISKQIGD 8
SISK +GD
Sbjct: 151 SISKYLGD 158




26|Sequence|126|135|IGDFIECPLC

>sp|TFE_STAMF|TRANSCRIPTION factor E|Staphylothermus marinus (strain ATCC 43588

Query: 4 FIECPLC 10
F++CPLC
Sbjct: 98 FLKCPLC 104


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDFIECPLC 10
G IECP+C
Sbjct: 434 GTDIECPVC 442


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GDFIECPLC 10
G IECP+C
Sbjct: 434 GTDIECPVC 442


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GDFIECPLC 10
GD ++CP C
Sbjct: 154 GDILKCPEC 162


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 6 ECPLC 10
ECPLC
Sbjct: 255 ECPLC 259


Query: 1 IGDFIECPLC 10
IG ++CP C
Sbjct: 231 IGYVMQCPNC 240


>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 6 ECPLC 10
ECPLC
Sbjct: 121 ECPLC 125


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GDFIECPL 9
GD+IE PL
Sbjct: 224 GDYIEMPL 231


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 GDFIECPLC 10
G +ECP C
Sbjct: 20 GTTVECPAC 28


>sp|RIBL_METMA|FAD synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 ECPLC 10
ECPLC
Sbjct: 133 ECPLC 137


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDFIECPLC 10
G I CP C
Sbjct: 163 GKLITCPTC 171


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GDFIECPLC 10
G I CP C
Sbjct: 163 GKLITCPTC 171


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 3 DFIECPLC 10
D ECP C
Sbjct: 144 DLQECPTC 151


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 3 DFIECPLC 10
++++CP+C
Sbjct: 104 EYVKCPVC 111


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 ECPLC 10
ECPLC
Sbjct: 133 ECPLC 137


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 5 IECPLC 10
+ECP+C
Sbjct: 1 MECPVC 6


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 5 IECPLC 10
++CPLC
Sbjct: 170 VDCPLC 175


>sp|RL2_METKA|LARGE ribosomal subunit protein uL2|Methanopyrus kandleri (strain AV19

Query: 1 IGDFIEC 7
+GD IEC
Sbjct: 80 VGDIIEC 86


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii

Query: 1 IGDFIEC 7
+GD IEC
Sbjct: 80 VGDIIEC 86


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 DFIECPLC 10
+F+ CP+C
Sbjct: 105 EFVICPVC 112


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 4 FIECPLC 10
F ECP C
Sbjct: 54 FYECPEC 60


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 2 GDFIECPLC 10
GD+++C C
Sbjct: 367 GDYLKCKRC 375


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 GDFIECPLC 10
GD+++C C
Sbjct: 367 GDYLKCKRC 375


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 4 FIECPLC 10
F+ CP C
Sbjct: 625 FVRCPKC 631


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IGDFIECP 8
+ DF+ CP
Sbjct: 344 LNDFVPCP 351


>sp|AMPPA_PYRHO|AMP phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IGDFIE 6
IGDFIE
Sbjct: 50 IGDFIE 55


>sp|RL37A_METKA|LARGE ribosomal subunit protein eL43|Methanopyrus kandleri (strain AV19

Query: 6 ECPLC 10
ECP+C
Sbjct: 37 ECPVC 41


>sp|KPTA_THEVO|PROBABLE RNA 2'-phosphotransferase|Thermoplasma volcanium (strain ATCC

Query: 6 ECPLC 10
ECP+C
Sbjct: 15 ECPVC 19


>sp|KPTA_THEAC|PROBABLE RNA 2'-phosphotransferase|Thermoplasma acidophilum (strain ATCC

Query: 6 ECPLC 10
ECP+C
Sbjct: 15 ECPVC 19


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 6 ECPLC 10
ECP+C
Sbjct: 424 ECPVC 428


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 6 ECPLC 10
ECP+C
Sbjct: 388 ECPVC 392


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 4 FIECPLC 10
F++CP C
Sbjct: 75 FMKCPKC 81


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 4 FIECPLC 10
F++CP C
Sbjct: 87 FMKCPKC 93


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 4 FIECPLC 10
FI CP C
Sbjct: 107 FISCPNC 113


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 6 ECPLC 10
ECP+C
Sbjct: 270 ECPVC 274


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 IGDFIECPLC 10
IG ++CP C
Sbjct: 231 IGFVMQCPKC 240


>sp|RL37A_AERPE|LARGE ribosomal subunit protein eL43|Aeropyrum pernix (strain ATCC

Query: 6 ECPLC 10
ECP C
Sbjct: 37 ECPFC 41


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 IGDFIECPLC 10
+ D ++CP C
Sbjct: 105 VKDLLKCPKC 114


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IGDFIECPL 9
+GD CPL
Sbjct: 204 LGDIKHCPL 212


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 2 GDFIECPLC 10
G + CP+C
Sbjct: 40 GQKLRCPIC 48


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FIECPLC 10
F+ CP C
Sbjct: 107 FLSCPRC 113


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 5 IECPLC 10
+ECP C
Sbjct: 39 VECPEC 44


>sp|MTAD2_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GDFIEC 7
G+F+EC
Sbjct: 15 GEFVEC 20


>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IGDFIECPL 9
IG F+E P+
Sbjct: 123 IGSFLEVPV 131


>sp|AMPPA_PYRAB|AMP phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 IGDFIE 6
IGDF+E
Sbjct: 50 IGDFVE 55


>sp|IF2B_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 FIECPLC 10
++ CP C
Sbjct: 112 YVRCPTC 118


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 4 FIECPLC 10
+ ECP C
Sbjct: 243 YYECPKC 249


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IGDFIECPLC 10
+ +F+ CP C
Sbjct: 98 VEEFVLCPEC 107


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 5 IECPLC 10
+ECP C
Sbjct: 717 VECPNC 722


>sp|RIBL_METMP|FAD synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IGDFIECPL 9
+ D+++CP
Sbjct: 121 VEDYVKCPF 129


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 IGDFIEC 7
IGD+I C
Sbjct: 147 IGDYIVC 153


>sp|Y2293_ARCFU|UNCHARACTERIZED protein AF_2293|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 IECPLC 10
IECP+C
Sbjct: 3 IECPIC 8


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 IGDFIECPLC 10
+G ++CP C
Sbjct: 231 LGFILQCPTC 240


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 4 FIECPLC 10
F+ CP C
Sbjct: 107 FLSCPKC 113


>sp|Y1942_ARCFU|UNCHARACTERIZED protein AF_1942|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FIECP 8
FIECP
Sbjct: 126 FIECP 130


>sp|RIBL_METBU|FAD synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IGDFIECPLC 10
I D ++C LC
Sbjct: 116 IDDAMKCELC 125


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 5 IECPLC 10
+ECP+C
Sbjct: 103 LECPVC 108


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 IGDFIECPLC 10
+ +F++ P+C
Sbjct: 226 LAEFVKIPVC 235


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 IECPLC 10
++CP+C
Sbjct: 76 VKCPVC 81


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 5 IECPLC 10
++CP+C
Sbjct: 7 LDCPVC 12


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 3 DFIECPLC 10
D I+C LC
Sbjct: 201 DLIKCSLC 208


>sp|HYPA_METBF|HYDROGENASE maturation factor HypA|Methanosarcina barkeri (strain Fusaro /

Query: 5 IECPLC 10
+ECP+C
Sbjct: 103 MECPVC 108


>sp|YO0A_ARCFU|UNCHARACTERIZED protein AF_2407.1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 IECPLC 10
++CPLC
Sbjct: 12 LKCPLC 17




27|Sequence|131|140|ECPLCLLRHS

>sp|GPMI2_METBF|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 ECPLCLLRHS 10
ECP C L+ S
Sbjct: 41 ECPWCFLKAS 50


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 2 CPLCLLRH 9
CP CLL++
Sbjct: 99 CPFCLLKN 106


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 CPLCLLRHS 10
CP C +R+S
Sbjct: 122 CPSCFIRYS 130


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 1 ECPLCL 6
ECP+CL
Sbjct: 431 ECPVCL 436


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPLCLLR 8
CP+CL++
Sbjct: 478 CPMCLIK 484


>sp|RIBL_METMA|FAD synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ECPLC 5
ECPLC
Sbjct: 133 ECPLC 137


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 ECPLC 5
ECPLC
Sbjct: 255 ECPLC 259


Query: 1 ECPLCLLR 8
+CP CL R
Sbjct: 236 QCPNCLYR 243


>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ECPLC 5
ECPLC
Sbjct: 121 ECPLC 125


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ECPLCLLRH 9
EC +C++R
Sbjct: 18 ECAICIIRQ 26


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CPLCLLR 8
CP+CL R
Sbjct: 9 CPICLKR 15


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ECPLCLLR 8
EC CLLR
Sbjct: 200 ECDSCLLR 207


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CPLCLLRHS 10
CP C +R+S
Sbjct: 122 CPNCHMRYS 130


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ECPLC-----LLRH 9
+CPLC LRH
Sbjct: 16 QCPLCKSYFWTLRH 29


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 CPLCLLRHS 10
CP C R+S
Sbjct: 126 CPKCFKRYS 134


>sp|TFE_PYRCJ|TRANSCRIPTION factor E|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 CPLCLLRH 9
CP C +R+
Sbjct: 122 CPNCFMRY 129


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ECPLC 5
ECPLC
Sbjct: 133 ECPLC 137


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 2 CPLCLLRHS 10
CP CL++ +
Sbjct: 514 CPWCLVKRA 522


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 ECPLCLLR 8
+CP CL R
Sbjct: 236 QCPKCLYR 243


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ECPLC 5
+CPLC
Sbjct: 16 QCPLC 20


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ECPLC 5
+CPLC
Sbjct: 16 QCPLC 20


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ECPLC 5
+CPLC
Sbjct: 21 QCPLC 25


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ECPLC 5
+CPLC
Sbjct: 16 QCPLC 20


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ECPLCLLRH 9
EC C+ RH
Sbjct: 211 ECESCVRRH 219


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ECPLCLLRH 9
EC C+ RH
Sbjct: 212 ECESCVRRH 220


>sp|Y816_METJA|UNCHARACTERIZED protein MJ0816|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPLCL 6
CPLC+
Sbjct: 254 CPLCI 258


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 2 CPLCL 6
CP+CL
Sbjct: 116 CPICL 120


>sp|PRIS_THEON|DNA primase small subunit PriS|Thermococcus onnurineus (strain NA1)

Query: 2 CPLCL 6
CP+CL
Sbjct: 118 CPICL 122


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 118 CPICL 122


>sp|PRIS_PYRHO|DNA primase small subunit PriS|Pyrococcus horikoshii (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 114 CPICL 118


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPLCL 6
CP+CL
Sbjct: 114 CPICL 118


>sp|PRIS_PYRAB|DNA primase small subunit PriS|Pyrococcus abyssi (strain GE5 /

Query: 2 CPLCL 6
CP+CL
Sbjct: 114 CPICL 118


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 2 CPLCL 6
CP+CL
Sbjct: 37 CPICL 41


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro

Query: 2 CPLCL 6
CP+CL
Sbjct: 44 CPICL 48


>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 CPLCL 6
CP+CL
Sbjct: 40 CPICL 44


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain

Query: 2 CPLCL 6
CP+CL
Sbjct: 44 CPICL 48


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CPLCL 6
CP+CL
Sbjct: 277 CPICL 281


>sp|D89S1_ARCFU|DAMAGE-CONTROL phosphatase AF_1104|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPLCLL 7
CP CLL
Sbjct: 7 CPSCLL 12


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 37 CPVCL 41


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain

Query: 2 CPLCL 6
CP+CL
Sbjct: 37 CPVCL 41


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 48 CPVCL 52


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 35 CPVCL 39


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain

Query: 2 CPLCL 6
CP+CL
Sbjct: 35 CPVCL 39


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 44 CPVCL 48


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 2 CPLCL 6
CP+CL
Sbjct: 44 CPVCL 48


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 2 CPLCL 6
CP+CL
Sbjct: 40 CPVCL 44


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM

Query: 2 CPLCL 6
CP+CL
Sbjct: 47 CPVCL 51


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 46 CPVCL 50


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 47 CPVCL 51


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 2 CPLCL 6
CP+CL
Sbjct: 39 CPVCL 43


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 CPLCL 6
CP+CL
Sbjct: 43 CPVCL 47


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 ECPLC 5
+CPLC
Sbjct: 501 KCPLC 505


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain

Query: 2 CPLCLLR 8
CP CL R
Sbjct: 17 CPKCLSR 23


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 1 ECPLCLL 7
E PLC+L
Sbjct: 139 EAPLCVL 145


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 CPLCL 6
CP+CL
Sbjct: 35 CPVCL 39


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ECPLCLL 7
+CPLC++
Sbjct: 171 DCPLCII 177


>sp|RIBL_ARCFU|FAD synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ECPLC 5
+CPLC
Sbjct: 117 DCPLC 121


>sp|YF7B_METJA|UNCHARACTERIZED protein MJ1572.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPLCL 6
CPLC+
Sbjct: 82 CPLCI 86




28|Sequence|136|145|LLRHSKDRFP

>sp|GATD_METS5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Metallosphaera sedula (strain ATCC 51363

Query: 3 RHSKDRFP 10
RHS D FP
Sbjct: 427 RHSLDHFP 434


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLRHSKDRF 9
L+RH K RF
Sbjct: 609 LIRHKKGRF 617


>sp|TYW32_THEKO|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 LLRHSKDRFP 10
+LR SK R P
Sbjct: 168 MLRRSKGRLP 177


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 LLRHSKDRFP 10
+LR ++RFP
Sbjct: 130 ILRELRERFP 139


>sp|FEN_PYRFU|FLAP endonuclease 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLRHSKD 7
++RHSKD
Sbjct: 253 IVRHSKD 259


>sp|Y1433_METJA|UNCHARACTERIZED protein MJ1433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRHSKDRFP 10
L H KD +P
Sbjct: 215 LMHLKDNYP 223




29|Sequence|141|150|KDRFPDIMTC

>sp|FAEHP_METMJ|BIFUNCTIONAL enzyme Fae/Hps|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DRFPDIMT 9
DRFPD+ T
Sbjct: 142 DRFPDVET 149


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RFPDIM 8
RFPDIM
Sbjct: 193 RFPDIM 198


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 KDRFPDIM 8
++RFP++M
Sbjct: 135 RERFPNVM 142


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 1 KDRFPD 6
+DRFPD
Sbjct: 29 EDRFPD 34


>sp|PYRB_META3|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcus aeolicus

Query: 1 KDRFPDI 7
K+RFPD+
Sbjct: 233 KERFPDL 239


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 3 RFPDIM 8
R+PDIM
Sbjct: 136 RYPDIM 141


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KDRFPDI 7
KDR PDI
Sbjct: 228 KDRTPDI 234


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 232 KERFPD 237


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 232 KERFPD 237


>sp|PYRB_PYRAB|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus abyssi (strain

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 232 KERFPD 237


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 231 KERFPD 236


>sp|PYRB_CENSY|ASPARTATE carbamoyltransferase catalytic subunit|Cenarchaeum symbiosum

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 231 KERFPD 236


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 1 KDRFPD 6
KDRFP+
Sbjct: 129 KDRFPE 134


>sp|PYRB_ARCFU|ASPARTATE carbamoyltransferase catalytic subunit|Archaeoglobus fulgidus

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 225 KERFPD 230


>sp|PYRB_SULTO|ASPARTATE carbamoyltransferase catalytic subunit|Sulfurisphaera tokodaii

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 223 KERFPD 228


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 229 KERFPD 234


>sp|PYRB_METAR|ASPARTATE carbamoyltransferase catalytic subunit|Methanocella arvoryzae

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 231 KERFPD 236


>sp|PYRB_METTH|ASPARTATE carbamoyltransferase catalytic subunit|Methanothermobacter

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 229 KERFPD 234


>sp|PYRB_HALLT|ASPARTATE carbamoyltransferase catalytic subunit|Halorubrum lacusprofundi

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 227 KERFPD 232


>sp|PYRB_KORCO|ASPARTATE carbamoyltransferase catalytic subunit|Korarchaeum cryptofilum

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 222 KERFPD 227


>sp|PYRB_NITMS|ASPARTATE carbamoyltransferase catalytic subunit|Nitrosopumilus maritimus

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 231 KERFPD 236


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 1 KDRFPDIMT 9
+DR P+I+T
Sbjct: 355 QDRLPEIIT 363


>sp|PYRB_METST|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaera stadtmanae

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 232 KERFPD 237


>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 1 KDRFPD 6
K+RFPD
Sbjct: 229 KERFPD 234




30|Sequence|146|155|DIMTCHHRSC

>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 5 CHHRS 9
CHHRS
Sbjct: 492 CHHRS 496


>sp|DNLI_NITMS|DNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 DIMTCHHRSC 10
DI+ C+ +SC
Sbjct: 343 DILYCNGKSC 352


>sp|URE1_NATPD|UREASE subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 IMTCHH 7
+M CHH
Sbjct: 318 VMVCHH 323


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IMTCHH 7
+M CHH
Sbjct: 318 VMVCHH 323


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 2 IMTCHH 7
+M CHH
Sbjct: 316 VMVCHH 321


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DIMTCHHRS 9
D CHHR+
Sbjct: 97 DDPACHHRT 105


>sp|FOLD_NITMS|BIFUNCTIONAL protein FolD|Nitrosopumilus maritimus (strain SCM1)

Query: 2 IMTCHHRS 9
++TCH R+
Sbjct: 185 VITCHSRT 192


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 DIMTCHHR 8
DI+ CH R
Sbjct: 252 DIVNCHGR 259


>sp|PYRI_IGNH4|ASPARTATE carbamoyltransferase regulatory chain|Ignicoccus hospitalis (strain

Query: 2 IMTCHHRSC 10
I+TC + SC
Sbjct: 105 ILTCPNSSC 113


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 CHHR 8
CHHR
Sbjct: 104 CHHR 107


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 6 HHRSC 10
HHR C
Sbjct: 271 HHRDC 275


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 6 HHRSC 10
HHR C
Sbjct: 271 HHRDC 275




31|Sequence|151|160|HHRSCVDCLR

>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 HHRSCVDC 8
H R CV C
Sbjct: 19 HRRECVSC 26


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HHRSCVDC 8
H R CV C
Sbjct: 19 HRRECVSC 26


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 3 RSCVDCL 9
R C+DCL
Sbjct: 135 RGCIDCL 141


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 3 RSCVDCL 9
R C+DCL
Sbjct: 132 RGCIDCL 138


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 4 SCVDCL 9
SC DCL
Sbjct: 332 SCADCL 337


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain

Query: 2 HRSCVDC 8
HRSC C
Sbjct: 89 HRSCYIC 95


>sp|Y090_METJA|UNCHARACTERIZED protease MJ0090|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HRSCVDCLR 10
H +C DCL+
Sbjct: 189 HANCGDCLQ 197


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 2 HRSCVDCL 9
+RSC +C+
Sbjct: 64 YRSCKECI 71


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 4 SCVDCLR 10
SCV CL+
Sbjct: 412 SCVHCLK 418


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CVDCL 9
CVDCL
Sbjct: 24 CVDCL 28


>sp|Y1105_THEAC|UNCHARACTERIZED protein Ta1105|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 HRSCVDCLR 10
+RSC+D R
Sbjct: 109 YRSCLDLAR 117


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RSCVDCL 9
+ C+DCL
Sbjct: 234 KPCLDCL 240


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 HRSCVDCLR 10
H +C+ C R
Sbjct: 452 HDACIGCRR 460




32|Sequence|156|165|VDCLRQYLRI

>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VDCLRQYLRI 10
+D L+QYLRI
Sbjct: 672 LDNLKQYLRI 681


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 DCLRQYL 8
DCLR YL
Sbjct: 349 DCLRYYL 355


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 3 CLRQYLRI 10
CLR+YL +
Sbjct: 180 CLRKYLAV 187


>sp|RL1_PYRCJ|LARGE ribosomal subunit protein uL1|Pyrobaculum calidifontis (strain DSM

Query: 4 LRQYLR 9
LRQYLR
Sbjct: 195 LRQYLR 200


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LRQYLR 9
LRQYLR
Sbjct: 319 LRQYLR 324


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 3 CLRQYLRI 10
CLR+YL +
Sbjct: 181 CLRKYLAV 188


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 3 CLRQYL 8
CLR+YL
Sbjct: 178 CLRKYL 183


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 DCLRQYL 8
DCL +YL
Sbjct: 75 DCLNKYL 81


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 3 CLRQYL 8
CLR+YL
Sbjct: 178 CLRKYL 183


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 3 CLRQYLRI 10
C+R+YL +
Sbjct: 178 CMRKYLAV 185


>sp|TRM1_METJA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocaldococcus

Query: 3 CLRQYL 8
CLR+YL
Sbjct: 172 CLRKYL 177


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 2 DCLRQYL 8
DCL +YL
Sbjct: 275 DCLMRYL 281




33|Sequence|161|170|QYLRIEISES

>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain

Query: 1 QYLRIEISES 10
QYLR E+S+S
Sbjct: 45 QYLRQELSQS 54


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5

Query: 1 QYLRIEISES 10
QYLR E+S+S
Sbjct: 45 QYLRQELSQS 54


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7

Query: 1 QYLRIEISES 10
QYLR E+S+S
Sbjct: 45 QYLRQELSQS 54


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6

Query: 1 QYLRIEISES 10
QYLR E+S+S
Sbjct: 45 QYLRQELSQS 54


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QYLRIE 6
QYLRIE
Sbjct: 677 QYLRIE 682




34|Sequence|166|175|EISESRVNIS

>sp|SAHH_THEKO|ADENOSYLHOMOCYSTEINASE kodakarensis (strain ATCC BAA-918

Query: 1 EISESRVNIS 10
EISE R NI+
Sbjct: 314 EISEPRPNIT 323




35|Sequence|171|180|RVNISCPECT

>sp|SYG_PYRAB|GLYCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 NISCPEC 9
NI CPEC
Sbjct: 128 NIKCPEC 134


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NISCPEC 9
NI CPEC
Sbjct: 126 NIRCPEC 132


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VNISCPEC 9
+N+ CPEC
Sbjct: 1 MNVKCPEC 8


Query: 2 VNISCPEC 9
+ + CP+C
Sbjct: 24 MEVKCPKC 31


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 NISCPEC 9
+I+CPEC
Sbjct: 124 DITCPEC 130


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 NISCPEC 9
N SCP+C
Sbjct: 175 NFSCPQC 181


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NISCPEC 9
NI CP+C
Sbjct: 125 NIKCPKC 131


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 NISCPEC 9
NI CP+C
Sbjct: 125 NIKCPKC 131


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 NISCPEC 9
NI CP+C
Sbjct: 125 NIKCPKC 131


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 NISCPEC 9
NI CP+C
Sbjct: 125 NIKCPKC 131


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RVNISCPEC 9
RV + CP C
Sbjct: 509 RVELKCPRC 517


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 NISCPEC 9
+I CPEC
Sbjct: 128 DIKCPEC 134


>sp|TFE_METTH|TRANSCRIPTION factor E|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 NISCPEC 9
N +CPEC
Sbjct: 134 NFTCPEC 140


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NISCPEC 9
NI CP+C
Sbjct: 125 NIRCPKC 131


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NISCPEC 9
NI CP+C
Sbjct: 127 NIRCPKC 133


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 NISCPEC 9
+I CPEC
Sbjct: 128 DIRCPEC 134


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 NISCPEC 9
+I CPEC
Sbjct: 128 DIRCPEC 134


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 SCPEC 9
SCPEC
Sbjct: 438 SCPEC 442


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 SCPEC 9
SCPEC
Sbjct: 475 SCPEC 479


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 ISCPEC 9
I CPEC
Sbjct: 470 IKCPEC 475


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 RVNISCPEC 9
+V + CPEC
Sbjct: 320 KVILRCPEC 328


Query: 6 CPEC 9
CPEC
Sbjct: 349 CPEC 352


>sp|DTDA_THEAC|D-AMINOACYL-TRNA deacylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VNISCP 7
+NISCP
Sbjct: 97 INISCP 102


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RVNISCPEC 9
R N CP+C
Sbjct: 147 RRNAMCPDC 155


>sp|PYRD_HALMA|DIHYDROOROTATE dehydrogenase (quinone)|Haloarcula marismortui (strain ATCC 43049

Query: 2 VNISCP 7
VN+SCP
Sbjct: 176 VNVSCP 181


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 RVNISCPEC 9
R+N CP+C
Sbjct: 361 RLNPLCPKC 369


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 VNISCPEC 9
V + CPEC
Sbjct: 497 VVLKCPEC 504


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 VNISCPEC 9
V + CPEC
Sbjct: 522 VVLKCPEC 529


>sp|RADA_METJA|DNA repair and recombination protein|Methanocaldococcus jannaschii

Query: 2 VNISCPE 8
VN+ CPE
Sbjct: 151 VNLQCPE 157


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 RVNISCPEC 9
+V I+CP C
Sbjct: 156 KVLITCPTC 164


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 4 ISCPEC 9
ISCP C
Sbjct: 108 ISCPNC 113


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 NISCPEC 9
++ CPEC
Sbjct: 127 DLRCPEC 133


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 3 NISCPEC 9
N+ CP C
Sbjct: 143 NLECPHC 149


>sp|DTDA_THEVO|D-AMINOACYL-TRNA deacylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VNISCPE 8
+N+SCP+
Sbjct: 97 INVSCPK 103


>sp|IF2A_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 VNISCPE 8
V++SCPE
Sbjct: 179 VDLSCPE 185


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RVNISCPEC 9
R N++CP C
Sbjct: 97 RCNLNCPIC 105


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 2 VNISCPEC 9
V I+CPEC
Sbjct: 69 VEINCPEC 76


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC

Query: 4 ISCPEC 9
++CPEC
Sbjct: 30 LTCPEC 35


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 129 LKCPEC 134


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 4 ISCPEC 9
+SCP+C
Sbjct: 108 LSCPKC 113


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 5 SCPEC 9
+CPEC
Sbjct: 285 ACPEC 289


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 SCPEC 9
+CPEC
Sbjct: 438 ACPEC 442


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 5 SCPEC 9
+CPEC
Sbjct: 438 ACPEC 442


>sp|PYRDB_METJA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocaldococcus jannaschii

Query: 2 VNISCP 7
+NISCP
Sbjct: 129 LNISCP 134


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 5 SCPEC 9
+CPEC
Sbjct: 174 TCPEC 178


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VNISCPECT 10
+ I CP C+
Sbjct: 283 ITIGCPHCS 291


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 4 ISCPEC 9
+SCP C
Sbjct: 677 LSCPRC 682


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 5 SCPECT 10
SCP CT
Sbjct: 276 SCPACT 281


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 6 CPECT 10
CPEC+
Sbjct: 37 CPECS 41


>sp|IF2B_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 4 ISCPEC 9
++CPEC
Sbjct: 100 VTCPEC 105


>sp|IF2B_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 4 ISCPEC 9
++CPEC
Sbjct: 100 VTCPEC 105


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VNISCPEC 9
++I CP C
Sbjct: 674 LSIKCPSC 681


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 4 ISCPEC 9
+SCP C
Sbjct: 670 LSCPRC 675


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 6 CPEC 9
CPEC
Sbjct: 57 CPEC 60


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 6 CPEC 9
CPEC
Sbjct: 18 CPEC 21


Query: 6 CPEC 9
CPEC
Sbjct: 30 CPEC 33


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CPEC 9
CPEC
Sbjct: 583 CPEC 586


Query: 3 NISCPEC 9
N+ CP C
Sbjct: 647 NLGCPYC 653


>sp|TFE_METS3|TRANSCRIPTION factor E|Methanobrevibacter smithii (strain ATCC 35061

Query: 6 CPEC 9
CPEC
Sbjct: 134 CPEC 137


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 CPEC 9
CPEC
Sbjct: 130 CPEC 133


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 CPEC 9
CPEC
Sbjct: 175 CPEC 178


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 CPEC 9
CPEC
Sbjct: 23 CPEC 26


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 6 CPEC 9
CPEC
Sbjct: 355 CPEC 358


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 454 CPEC 457


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 6 CPEC 9
CPEC
Sbjct: 454 CPEC 457


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 6 CPEC 9
CPEC
Sbjct: 716 CPEC 719


Query: 5 SCPEC 9
SCP+C
Sbjct: 747 SCPKC 751


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 6 CPEC 9
CPEC
Sbjct: 218 CPEC 221


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 5 SCPEC 9
+CPEC
Sbjct: 264 TCPEC 268


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 2 VNISCPEC 9
+ CPEC
Sbjct: 134 LGFECPEC 141


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 157 LKCPEC 162


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 6 CPEC 9
CPEC
Sbjct: 138 CPEC 141


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 ISCPEC 9
+SCP C
Sbjct: 108 LSCPRC 113


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 4 ISCPECT 10
I CP C+
Sbjct: 299 IGCPHCS 305


>sp|IF2B_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 103 VLCPEC 108


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 6 CPEC 9
CPEC
Sbjct: 138 CPEC 141


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 ISCPEC 9
+SCP C
Sbjct: 144 VSCPGC 149


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 4 ISCPEC 9
+SCP C
Sbjct: 144 VSCPGC 149


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 6 CPEC 9
CPEC
Sbjct: 160 CPEC 163


>sp|PYRDB_METKA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanopyrus kandleri (strain

Query: 2 VNISCP 7
+N+SCP
Sbjct: 124 LNVSCP 129


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 RVNISCPE 8
+VN+S PE
Sbjct: 519 KVNVSMPE 526


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVNISCPE 8
+VN+S PE
Sbjct: 516 KVNVSMPE 523


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 RVNISCPE 8
+VN+S PE
Sbjct: 516 KVNVSMPE 523


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 RVNISCPE 8
+VN+S PE
Sbjct: 493 KVNVSMPE 500


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 RVNISCPE 8
+VN+S PE
Sbjct: 893 KVNVSMPE 900


>sp|IF2B_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 104 VLCPEC 109


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae (strain

Query: 2 VNISCP 7
+N+SCP
Sbjct: 121 LNVSCP 126


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 103 VLCPEC 108


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 349 REAVSCSNCT 358


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 2 VNISCP 7
+N+SCP
Sbjct: 135 LNVSCP 140


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 6 CPEC 9
CPEC
Sbjct: 149 CPEC 152


>sp|IF2B_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 103 VLCPEC 108


>sp|IF2B_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 103 VLCPEC 108


>sp|IF2B_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 103 VLCPEC 108


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 2 VNISCP 7
+N+SCP
Sbjct: 132 LNVSCP 137


>sp|PYRDB_METTH|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanothermobacter

Query: 2 VNISCP 7
+N+SCP
Sbjct: 123 LNVSCP 128


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CPEC 9
CPEC
Sbjct: 30 CPEC 33


>sp|RS27_HALSA|SMALL ribosomal subunit protein eS27|Halobacterium salinarum (strain

Query: 3 NISCPEC 9
N+ CP+C
Sbjct: 7 NVECPDC 13


>sp|RS27_HALS3|SMALL ribosomal subunit protein eS27|Halobacterium salinarum (strain

Query: 3 NISCPEC 9
N+ CP+C
Sbjct: 7 NVECPDC 13


>sp|Y2370_ARCFU|UPF0148 protein AF_2370|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SCPEC 9
SCPEC
Sbjct: 31 SCPEC 35


>sp|AROD_METTP|3-DEHYDROQUINATE dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 NISCP 7
NISCP
Sbjct: 114 NISCP 118


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 14 CPEC 17


>sp|Y1017_METAC|UPF0251 protein MA_1017|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RVNISCPEC 9
RVN C EC
Sbjct: 100 RVNFLCKEC 108


>sp|HYPA_META3|HYDROGENASE maturation factor HypA|Methanococcus aeolicus (strain ATCC

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 94 VKCPEC 99


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 6 CPEC 9
CPEC
Sbjct: 14 CPEC 17


>sp|TF2B6_HALSA|TRANSCRIPTION initiation factor IIB 6|Halobacterium salinarum (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 25 CPEC 28


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VNISCPECT 10
VNIS PE T
Sbjct: 59 VNISLPEDT 67


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VNISCPEC 9
V CPEC
Sbjct: 68 VEEKCPEC 75


Query: 6 CPEC 9
CPEC
Sbjct: 60 CPEC 63


>sp|LYSW_SACS2|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Saccharolobus solfataricus (strain ATCC

Query: 2 VNISCPEC 9
VN+ CP C
Sbjct: 2 VNLKCPIC 9


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 369 REMVSCSNCT 378


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVNISCPECT 10
R +SC CT
Sbjct: 366 REMVSCSNCT 375


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 ISCPEC 9
+ CPEC
Sbjct: 102 VLCPEC 107


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 680 CPEC 683


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 6 CPEC 9
CPEC
Sbjct: 151 CPEC 154


>sp|TF2B1_THEAC|TRANSCRIPTION initiation factor IIB 1|Thermoplasma acidophilum (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 16 CPEC 19


>sp|TF2B_METMJ|TRANSCRIPTION initiation factor IIB|Methanoculleus marisnigri (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 41 CPEC 44


>sp|TF2B_METB6|TRANSCRIPTION initiation factor IIB|Methanoregula boonei (strain DSM 21154

Query: 6 CPEC 9
CPEC
Sbjct: 38 CPEC 41


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 6 CPEC 9
CPEC
Sbjct: 745 CPEC 748


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 3 NISCPEC 9
+I CP+C
Sbjct: 248 SIHCPKC 254


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 3 NISCPEC 9
N CPEC
Sbjct: 355 NPICPEC 361


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 6 CPEC 9
CPEC
Sbjct: 17 CPEC 20


>sp|TF2B2_THEAC|TRANSCRIPTION initiation factor IIB 2|Thermoplasma acidophilum (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 11 CPEC 14


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 6 CPEC 9
CPEC
Sbjct: 271 CPEC 274


>sp|TF2B_METTP|TRANSCRIPTION initiation factor IIB|Methanothrix thermoacetophila (strain DSM

Query: 1 RVNISCPEC 9
+ + CPEC
Sbjct: 36 KYTVECPEC 44


>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 7 CPEC 10


>sp|TF2B3_HALSA|TRANSCRIPTION initiation factor IIB 3|Halobacterium salinarum (strain ATCC

Query: 6 CPEC 9
CPEC
Sbjct: 25 CPEC 28


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 6 CPEC 9
CPEC
Sbjct: 268 CPEC 271


>sp|RNP4_METTH|RIBONUCLEASE P protein component 4|Methanothermobacter thermautotrophicus

Query: 1 RVNISCPEC 9
+VN C EC
Sbjct: 84 KVNFRCHEC 92


>sp|RS27_METJA|SMALL ribosomal subunit protein eS27|Methanocaldococcus jannaschii

Query: 2 VNISCPEC 9
+ + CPEC
Sbjct: 13 LRVQCPEC 20


>sp|UBAA_HALVD|SAMP-ACTIVATING enzyme E1|Haloferax volcanii (strain ATCC 29605

Query: 1 RVNISCPEC 9
R N CP C
Sbjct: 240 RTNPDCPVC 248


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 6 CPEC 9
CPEC
Sbjct: 151 CPEC 154




36|Sequence|176|185|CPECTERFNP

>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 CPECTERFNP 10
CP C + NP
Sbjct: 426 CPTCDQEVNP 435


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CPECTERFN 9
CP C ER +
Sbjct: 678 CPSCNERLD 686


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 CPECTERFN 9
CP+C R+N
Sbjct: 384 CPKCGRRYN 392


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 CPECTERF 8
CPEC E F
Sbjct: 23 CPECGEYF 30


>sp|Y968_METBU|UPF0212 protein Mbur_0968|Methanococcoides burtonii (strain DSM 6242

Query: 1 CPECTERF 8
CP C+E F
Sbjct: 52 CPACSEPF 59


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 CPECTERF 8
CP+C E F
Sbjct: 19 CPKCGEYF 26


>sp|Y441_HALMA|UPF0212 protein rrnAC0441|Haloarcula marismortui (strain ATCC 43049

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 51 CPACGEPFD 59


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 52 CPACGEPFD 60


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 CPECTERF 8
CPEC E+
Sbjct: 268 CPECGEKL 275


>sp|Y869_HALLT|UPF0212 protein Hlac_0869|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 52 CPACGEPFD 60


>sp|Y1372_METAC|UPF0212 protein MA_1372|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 51 CPACGEPFS 59


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 CPECTE 6
CPEC E
Sbjct: 349 CPECGE 354


>sp|Y525_METKA|UNCHARACTERIZED protein MK0525|Methanopyrus kandleri (strain AV19 /

Query: 1 CPECTE 6
CPEC E
Sbjct: 177 CPECYE 182


>sp|TFE_METS3|TRANSCRIPTION factor E|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CPECTERF 8
CPEC E
Sbjct: 134 CPECGEEL 141


>sp|IF2B_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 CPECTERF 8
CP C RF
Sbjct: 109 CPTCGSRF 116


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 CPECTER 7
CP C ER
Sbjct: 237 CPSCPER 243


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CPECTERFNP 10
CP +FNP
Sbjct: 247 CPPRETKFNP 256


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 1 CPECTE 6
CPEC E
Sbjct: 18 CPECRE 23


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 CPECTER 7
CP C E+
Sbjct: 146 CPHCNEK 152


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 CPECTE 6
CP+C E
Sbjct: 352 CPKCNE 357


>sp|Y2357_METMA|UPF0212 protein MM_2357|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 51 CPVCGEPFS 59


>sp|QUEC_METMP|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 PECTERFN 9
PE ERFN
Sbjct: 141 PEFIERFN 148


>sp|Y057_METAR|UPF0212 protein UNCMA_00570|Methanocella arvoryzae (strain DSM 22066

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 52 CPFCGEPFD 60


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 CPECTERFNP 10
CP R+NP
Sbjct: 279 CPAREVRYNP 288


>sp|SYY_PYRHO|TYROSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CPECTERFNP 10
CP R+NP
Sbjct: 279 CPAREVRYNP 288


>sp|QUEC_METM6|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C6 /

Query: 2 PECTERFN 9
PE ERFN
Sbjct: 141 PEFIERFN 148


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 CPECTE 6
CP CTE
Sbjct: 281 CPICTE 286


>sp|QUEC_METM7|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 PECTERFN 9
PE ERFN
Sbjct: 141 PEFIERFN 148


>sp|Y2902_METBF|UPF0212 protein Mbar_A2902|Methanosarcina barkeri (strain Fusaro /

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 51 CPLCGEPFS 59


>sp|QUEC_METM5|7-CYANO-7-DEAZAGUANINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 PECTERFN 9
PE ERFN
Sbjct: 141 PEFIERFN 148


>sp|Y1331_ARCFU|UNCHARACTERIZED protein AF_1331|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CPECTER 7
CP C ER
Sbjct: 60 CPFCPER 66


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CPECTE 6
CP+C E
Sbjct: 501 CPDCGE 506


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 CPECTERF 8
C EC E F
Sbjct: 88 CKECLESF 95


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 CPECTER 7
CP C E+
Sbjct: 146 CPHCGEK 152


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 76 CTMKYNP 82


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 80 CTMKYNP 86


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 80 CTMKYNP 86


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 76 CTMKYNP 82


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 83 CTMKYNP 89


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 85 CTMKYNP 91


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 86 CTMKYNP 92


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 87 CTMKYNP 93


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 87 CTMKYNP 93


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 87 CTMKYNP 93


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 87 CTMKYNP 93


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 87 CTMKYNP 93


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 87 CTMKYNP 93


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 80 CTMKYNP 86


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 80 CTMKYNP 86


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 80 CTMKYNP 86


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 80 CTMKYNP 86


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 CPECTER 7
CP C E+
Sbjct: 105 CPNCGEK 111


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 78 CTMKYNP 84


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 CPECTERF 8
CP C E F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 CPECTERF 8
CP C E F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 CPECTERF 8
CP C E F
Sbjct: 263 CPICGENF 270


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 CPECTER 7
CP C E+
Sbjct: 93 CPNCGEK 99


Query: 1 CPECTE 6
CP+C E
Sbjct: 78 CPKCPE 83


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 CPECTERF 8
CP C E F
Sbjct: 263 CPICGENF 270


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 CPECTERF 8
CP C E F
Sbjct: 263 CPICGENF 270


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 CPECTER 7
CP C E+
Sbjct: 146 CPHCGEK 152


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 CPECTERF 8
CP C E F
Sbjct: 263 CPICGENF 270


>sp|Y1165_HALMA|UPF0212 protein rrnAC1165|Haloarcula marismortui (strain ATCC 43049

Query: 1 CPECTERFNP 10
CP C E P
Sbjct: 50 CPHCGETLEP 59


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CPECTERF 8
CP C E+
Sbjct: 149 CPRCNEKL 156


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 CTERFNP 10
CT ++NP
Sbjct: 85 CTMKYNP 91


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CPECTERFNP 10
C E ER NP
Sbjct: 25 CLEKIERLNP 34


>sp|THIRX_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 1 CPECTERF 8
CP+C + +
Sbjct: 15 CPKCNQTY 22


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 CPECTE 6
CP+C E
Sbjct: 59 CPDCDE 64


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 1 CPECTE 6
CP+C E
Sbjct: 59 CPDCDE 64


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 1 CPECTE 6
CP+C E
Sbjct: 136 CPQCGE 141


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 CPECTERFN 9
CP C E F+
Sbjct: 263 CPVCGEIFS 271




37|Sequence|181|190|ERFNPHDIRL

>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NPHDIRL 10
+PHDIRL
Sbjct: 465 HPHDIRL 471


>sp|TKSU_THEKO|TK-SUBTILISIN kodakarensis (strain ATCC BAA-918

Query: 2 RFNPHDI 8
+FNPH++
Sbjct: 40 KFNPHEV 46


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 1 ERFNPHDIRL 10
E+FNP +I L
Sbjct: 208 EKFNPEEIIL 217


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FNPHDIR 9
NPH+IR
Sbjct: 102 LNPHEIR 108


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 3 FNPHDIR 9
NPH+IR
Sbjct: 102 LNPHEIR 108


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 3 FNPHDIR 9
NPH+IR
Sbjct: 102 LNPHEIR 108


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 3 FNPHDIR 9
NPH+IR
Sbjct: 102 LNPHEIR 108


>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ERFNPHDIRL 10
ERFNP ++L
Sbjct: 124 ERFNPAVLKL 133


>sp|DUT_AERPE|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Aeropyrum pernix

Query: 4 NPHDIRL 10
NPH +RL
Sbjct: 122 NPHGLRL 128


>sp|Y1426_METTH|UPF0284 protein MTH_1426|Methanothermobacter thermautotrophicus (strain

Query: 4 NPHDIR 9
NPHD++
Sbjct: 192 NPHDLK 197


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERFNPHDIRL 10
ER+N H I++
Sbjct: 782 ERYNEHKIKV 791


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ERFNPHDIRL 10
+R+NP IRL
Sbjct: 282 KRYNPEVIRL 291


>sp|SPEH_ARCFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERFNPHDI 8
++FNPH +
Sbjct: 46 KQFNPHGV 53


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FNPHDI 8
NPHD+
Sbjct: 349 LNPHDV 354


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERFNPHDIRL 10
ER++P IRL
Sbjct: 282 ERYDPEVIRL 291


>sp|HEM1_METST|GLUTAMYL-TRNA reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 NPHDI 8
NPHDI
Sbjct: 258 NPHDI 262


>sp|ACDG_METKA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanopyrus kandleri

Query: 3 FNPHDI 8
F PHD+
Sbjct: 237 FGPHDV 242


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RFNPHD 7
RFNP D
Sbjct: 2 RFNPQD 7


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 FNPHDI 8
FNPH I
Sbjct: 984 FNPHSI 989


>sp|ENCP4_PYRWO|PUTATIVE type 4B encapsulin shell|Pyrococcus woesei

Query: 2 RFNPHDIRL 10
R+ P D+RL
Sbjct: 39 RYLPEDVRL 47


>sp|ENCP4_PYRFU|PUTATIVE type 4B encapsulin shell|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RFNPHDIRL 10
R+ P D+RL
Sbjct: 39 RYLPEDVRL 47




38|Sequence|186|195|HDIRLILSDD

>sp|RS3A_METHJ|SMALL ribosomal subunit protein eS1|Methanospirillum hungatei JF-1

Query: 1 HDIRLILSDD 10
H+IR IL+DD
Sbjct: 136 HEIRKILTDD 145


>sp|SYFA_THEGJ|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DIRLILSDD 10
D+R +LSDD
Sbjct: 92 DLREVLSDD 100


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HDIRLI 6
HDIRLI
Sbjct: 467 HDIRLI 472




39|Sequence|191|200|ILSDDVLMEK

>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 ILSDDVLMEK 10
+ +DDVL+EK
Sbjct: 28 VYADDVLLEK 37


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ILSDDVLMEK 10
+ +DDVL+EK
Sbjct: 36 VYADDVLIEK 45


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ILSDDVLMEK 10
+ +D+VL+EK
Sbjct: 28 VYADEVLLEK 37


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LSDDVLMEK 10
+SDDVL+ K
Sbjct: 317 ISDDVLVVK 325




40|Sequence|196|205|VLMEKYEEFM

>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 LMEKYEEFM 10
L+E YEE+M
Sbjct: 449 LLESYEEWM 457


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 4 EKYEEF 9
EKYEEF
Sbjct: 82 EKYEEF 87


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLMEKYEEFM 10
V +EKYE F+
Sbjct: 178 VALEKYEPFI 187


>sp|PSTK_METJA|L-SERYL-TRNA(SEC) kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLMEKYEEFM 10
V EKYEEF+
Sbjct: 45 VWKEKYEEFI 54


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 LMEKYEEFM 10
LME+YEE++
Sbjct: 437 LMEEYEEWV 445


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 1 VLMEKYEEF 9
V++EKY EF
Sbjct: 396 VVVEKYSEF 404


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 2 LMEKYEEFM 10
L+EKYE+++
Sbjct: 568 LLEKYEKYL 576


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLMEKYEEF 9
+LME+ EEF
Sbjct: 797 ILMERAEEF 805


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 LMEKYEEF 9
L+E+YE F
Sbjct: 61 LLERYEPF 68


>sp|FOLD_THEVO|BIFUNCTIONAL protein FolD|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VLMEKYEEF 9
V++EKYE+
Sbjct: 61 VVLEKYEDL 69


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 2 LMEKYEEF 9
L+E+YE F
Sbjct: 53 LLERYEPF 60


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 1 VLMEKYEEF 9
+++EKY EF
Sbjct: 398 MVIEKYSEF 406


>sp|RPO7_METJA|DNA-DIRECTED RNA polymerase subunit Rpo7|Methanocaldococcus jannaschii (strain

Query: 1 VLMEKYE 7
+LMEKYE
Sbjct: 29 ILMEKYE 35


>sp|RS17E_METKA|SMALL ribosomal subunit protein eS17|Methanopyrus kandleri (strain AV19

Query: 2 LMEKYEEFM 10
++EKYEE++
Sbjct: 16 IVEKYEEYL 24


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 2 LMEKYEEFM 10
++ K+EEFM
Sbjct: 276 VLNKFEEFM 284


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 1 VLMEKYEEFM 10
+LMEKY++ +
Sbjct: 564 ILMEKYKDIV 573


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 3 MEKYEEFM 10
+EK+EEF+
Sbjct: 478 LEKFEEFV 485


>sp|GRPE_METBF|PROTEIN GrpE|Methanosarcina barkeri (strain Fusaro /

Query: 1 VLMEKY 6
VLMEKY
Sbjct: 65 VLMEKY 70


>sp|HELS_THEVO|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma volcanium (strain ATCC 51530

Query: 3 MEKYEEF 9
MEKYEE
Sbjct: 79 MEKYEEL 85


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 4 EKYEEF 9
EKYEEF
Sbjct: 81 EKYEEF 86


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 2 LMEKYEEFM 10
L+EKYEE +
Sbjct: 445 LVEKYEEMV 453


>sp|Y123_ARCFU|UNCHARACTERIZED protein AF_0123|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MEKYEEFM 10
ME Y EF+
Sbjct: 67 MESYSEFL 74


>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MEKYEEF 9
M KYEEF
Sbjct: 163 MAKYEEF 169




41|Sequence|201|210|YEEFMLRRWL

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 YEEFMLRRWL 10
+EE +L+ WL
Sbjct: 903 FEEALLKSWL 912


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 YEEFMLRRWL 10
YE+ +L+ WL
Sbjct: 905 YEDALLKSWL 914


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EFMLRRW 9
EFMLR W
Sbjct: 273 EFMLREW 279


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 EEFMLRRWL 10
EEF+ RR++
Sbjct: 527 EEFLKRRYI 535


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YEEFMLRR 8
YEEF LR+
Sbjct: 740 YEEFQLRK 747


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 YEEFMLRR 8
YEEF LR+
Sbjct: 740 YEEFQLRK 747


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EEFMLRRWL 10
+EFML+ W+
Sbjct: 125 DEFMLQEWI 133


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 1 YEEFMLRRWL 10
YE+++ + WL
Sbjct: 333 YEKYITKEWL 342


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YEEFMLRR 8
YEEF LR+
Sbjct: 740 YEEFQLRK 747


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain

Query: 1 YEEFMLRRWL 10
Y+E + ++WL
Sbjct: 23 YDEELAKKWL 32


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YEEFMLRR 8
YEEF LR+
Sbjct: 737 YEEFHLRK 744


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YEEFMLRRWL 10
Y+E L RWL
Sbjct: 77 YQEKALERWL 86


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 1 YEEFMLRRWL 10
YE+++ + WL
Sbjct: 333 YEKYISKEWL 342


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 3 EFMLRRW 9
EF+L RW
Sbjct: 248 EFLLFRW 254


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YEEFMLRRWL 10
Y++ +LR WL
Sbjct: 217 YDKQLLRDWL 226




42|Sequence|206|215|LRRWLVADPD

>sp|TRMY_METKA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanopyrus kandleri

Query: 1 LRRWLVADPD 10
LRR L ADPD
Sbjct: 87 LRRALEADPD 96


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RWLVADP 9
RW+V DP
Sbjct: 253 RWVVEDP 259


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LRRWLVAD 8
L+RW VAD
Sbjct: 120 LKRWKVAD 127


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 3 RWLVADPD 10
+WL DPD
Sbjct: 520 KWLCEDPD 527


>sp|KCY_ARCFU|CYTIDYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRRWLVADPD 10
L+ W+ ADP+
Sbjct: 93 LKVWIFADPE 102


>sp|SRP54_SACS2|SIGNAL recognition particle 54 kDa|Saccharolobus solfataricus (strain ATCC

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 1 LRRWLVA 7
+RRWL A
Sbjct: 374 IRRWLAA 380


>sp|MAP2_ARCFU|METHIONINE aminopeptidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RRWLVADPD 10
+RWL PD
Sbjct: 238 KRWLKKAPD 246


>sp|DNPH1_METMA|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 4 WLVADPD 10
W VADP+
Sbjct: 59 WHVADPE 65


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LRRWLVADP 9
++RW V DP
Sbjct: 190 IQRWPVRDP 198


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 4 WLVADPD 10
W +ADPD
Sbjct: 731 WTLADPD 737


>sp|DNPH1_METBF|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 4 WLVADPD 10
W VADP+
Sbjct: 57 WHVADPE 63


>sp|ARSC_HALSA|PUTATIVE arsenate reductase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LRRWLVADPD 10
+R W + DPD
Sbjct: 104 VRDWALDDPD 113


>sp|KCY_METVS|CYTIDYLATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 LRRWLVADP 9
L WL ADP
Sbjct: 96 LSIWLKADP 104


>sp|KCY_METM6|CYTIDYLATE kinase|Methanococcus maripaludis (strain C6 /

Query: 1 LRRWLVADP 9
L WL ADP
Sbjct: 96 LSIWLKADP 104


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 LRRWLV 6
LRRWL+
Sbjct: 423 LRRWLL 428


>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 2 RRWLVADP 9
++W++ DP
Sbjct: 14 KKWILVDP 21


>sp|KCY_METM7|CYTIDYLATE kinase|Methanococcus maripaludis (strain C7 /

Query: 1 LRRWLVADP 9
L WL ADP
Sbjct: 96 LSIWLKADP 104


>sp|KCY_METM5|CYTIDYLATE kinase|Methanococcus maripaludis (strain C5 /

Query: 1 LRRWLVADP 9
L WL ADP
Sbjct: 96 LSIWLKADP 104


>sp|KCY_METMP|CYTIDYLATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LRRWLVADP 9
L WL ADP
Sbjct: 96 LSIWLKADP 104


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LRRWLVA 7
LR+WL A
Sbjct: 314 LRKWLAA 320


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LRRWLVA 7
LR+WL A
Sbjct: 314 LRKWLAA 320




43|Sequence|211|220|VADPDCRWCP

>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 VADPDCRWCP 10
VADP RW P
Sbjct: 108 VADPPDRWDP 117


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 4 PDCRWCP 10
PDC CP
Sbjct: 170 PDCYRCP 176


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM

Query: 2 ADPDCRWCP 10
A+P+ R CP
Sbjct: 40 AEPNTRTCP 48


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PDCRWC 9
P C WC
Sbjct: 49 PICNWC 54


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PDCRWC 9
P C WC
Sbjct: 44 PVCNWC 49


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PDCRWC 9
P C WC
Sbjct: 22 PVCNWC 27


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 4 PDCRWC 9
P C WC
Sbjct: 44 PVCNWC 49


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 4 PDCRWC 9
P C WC
Sbjct: 44 PVCNWC 49


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 4 PDCRWC 9
P C WC
Sbjct: 44 PVCNWC 49


>sp|THIO_ARCFU|PROBABLE Thioredoxin|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PDCRWCP 10
P C +CP
Sbjct: 10 PTCPYCP 16


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 ADPDCRWCP 10
+DP+ + CP
Sbjct: 406 SDPETKVCP 414


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 2 ADPDCRW 8
+DP+C W
Sbjct: 23 SDPNCPW 29


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 2 ADPDCRWCP 10
ADP+ CP
Sbjct: 39 ADPNTHTCP 47


>sp|RL15E_STAMF|LARGE ribosomal subunit protein eL15|Staphylothermus marinus (strain ATCC

Query: 3 DPDCRW 8
DPD +W
Sbjct: 145 DPDIKW 150


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 1 VADPDCRWC 9
V DP+ RW
Sbjct: 97 VKDPEVRWT 105


>sp|THIO_METTH|PROBABLE Thioredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PDCRWCP 10
P C +CP
Sbjct: 11 PTCPYCP 17


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 PDCRWCP 10
PDC CP
Sbjct: 25 PDCEGCP 31


>sp|THIO_METTM|PROBABLE Thioredoxin|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 PDCRWCP 10
P C +CP
Sbjct: 11 PTCPYCP 17


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ADPDCRWCP 10
+D D R CP
Sbjct: 171 SDADVRTCP 179


>sp|Y118_ARCFU|UNCHARACTERIZED protein AF_0118|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DPDCRWCP 10
D DC CP
Sbjct: 56 DFDCEGCP 63


>sp|RS17_THEKO|SMALL ribosomal subunit protein uS17|Thermococcus kodakarensis (strain

Query: 3 DPDCRW 8
DP C W
Sbjct: 17 DPKCPW 22


>sp|RS17_PYRHO|SMALL ribosomal subunit protein uS17|Pyrococcus horikoshii (strain ATCC

Query: 3 DPDCRW 8
DP C W
Sbjct: 21 DPKCPW 26




44|Sequence|216|225|CRWCPAPDCG

>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 CRWCPAPDCG 10
C WC DCG
Sbjct: 419 CSWCGETDCG 428


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 1 CRWCPAPDC 9
C CPAP C
Sbjct: 90 CPKCPAPQC 98


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 703 RWAPVPD 709


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 703 RWAPVPD 709


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 701 RWAPVPD 707


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 RWCPAPD 8
RW P PD
Sbjct: 702 RWAPVPD 708


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 CRWCPAP 7
C WC AP
Sbjct: 465 CAWCGAP 471


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 CRWCPAPDC 9
C CP P C
Sbjct: 78 CPKCPEPQC 86


>sp|SYP_METS3|PROLINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 WCPAPDCG 10
WC DCG
Sbjct: 420 WCGDTDCG 427


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RWCPAPDC 9
RWC DC
Sbjct: 98 RWCYFADC 105


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RWCPAPDC 9
RWC DC
Sbjct: 98 RWCYFADC 105


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RWCPAPDC 9
RWC DC
Sbjct: 98 RWCYFADC 105


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CRWCPAPDC 9
C WC DC
Sbjct: 431 CGWCGDEDC 439


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCESNECG 439


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSKECG 439


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSKECG 439


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSKECG 439


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSKECG 439


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSKECG 439


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSKECG 439


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 428 WCGSKECG 435


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 RWCPAPD 8
+W P PD
Sbjct: 702 KWAPVPD 708


>sp|IF2B_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 CRWCPAPD 8
CR C +PD
Sbjct: 104 CRECNSPD 111


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RWCP 5
RWCP
Sbjct: 181 RWCP 184


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 432 WCGSNECG 439


>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 4 CPAPDC 9
CP P+C
Sbjct: 111 CPNPNC 116


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 704 RWAPVPE 710


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 699 RWAPVPE 705


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 701 RWAPVPE 707


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 RWCPAPD 8
+WCP D
Sbjct: 180 KWCPNDD 186


>sp|PYRI_HALSA|ASPARTATE carbamoyltransferase regulatory chain|Halobacterium salinarum

Query: 4 CPAPDC 9
CP P+C
Sbjct: 110 CPNPNC 115


>sp|PYRI_THEKO|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus kodakarensis

Query: 4 CPAPDC 9
CP P+C
Sbjct: 108 CPNPNC 113


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CRWCPAPD 8
C +C APD
Sbjct: 143 CPYCGAPD 150


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 704 RWAPMPE 710


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 428 WCGEEECG 435


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 427 WCGEEECG 434


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 435 WCGEEECG 442


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 WCPAPDCG 10
WC + +CG
Sbjct: 429 WCGSVECG 436


>sp|PYRI_THEPD|ASPARTATE carbamoyltransferase regulatory chain|Thermofilum pendens (strain

Query: 4 CPAPDC 9
CP P+C
Sbjct: 108 CPNPNC 113


>sp|PYRI_THEGJ|ASPARTATE carbamoyltransferase regulatory chain|Thermococcus gammatolerans

Query: 4 CPAPDC 9
CP P+C
Sbjct: 107 CPNPNC 112


>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 3 WCPAPDCG 10
W PA D G
Sbjct: 151 WVPADDAG 158


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri (strain

Query: 4 CPAPDC 9
CP P+C
Sbjct: 107 CPNPNC 112


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 WCPAPD 8
W P PD
Sbjct: 702 WAPVPD 707


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 430 WCGKKECG 437


>sp|TRPB_PYRIL|TRYPTOPHAN synthase beta chain|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 49 RWVPIPE 55


>sp|PYRI_SACS2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus solfataricus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|PYRI_SACI7|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|PYRI_SACI6|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|PYRI_SACI4|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|PYRI_SACI3|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|PYRI_SACI2|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|PYRI_SACI1|ASPARTATE carbamoyltransferase regulatory chain|Saccharolobus islandicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 113 CPNPQC 118


>sp|IF2B_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 CRWCPAPD 8
CR C PD
Sbjct: 110 CRECGKPD 117


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 704 RWAPYPE 710


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 704 RWAPYPE 710


>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WCPAPD 8
W PAP+
Sbjct: 378 WVPAPE 383


>sp|PYRI_METLZ|ASPARTATE carbamoyltransferase regulatory chain|Methanocorpusculum labreanum

Query: 4 CPAPDC 9
CP P+C
Sbjct: 112 CPNPNC 117


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 130 CPAAFCG 136


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 172 CPASFCG 178


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 171 CPAAFCG 177


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 172 CPAAFCG 178


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 131 CPAAFCG 137


>sp|GATA_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Archaeoglobus fulgidus (strain ATCC

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 168 CPASFCG 174


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WCPAPD 8
W PAP+
Sbjct: 519 WAPAPE 524


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 139 CPAAFCG 145


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RWCPAPDC 9
+WC DC
Sbjct: 98 KWCYFADC 105


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RWCPAPD 8
RW P P+
Sbjct: 704 RWAPFPE 710


>sp|PYRI_HYPBU|ASPARTATE carbamoyltransferase regulatory chain|Hyperthermus butylicus

Query: 4 CPAPDC 9
CP P C
Sbjct: 110 CPNPSC 115


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 WCPAPDCG 10
WC + CG
Sbjct: 435 WCGSERCG 442


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 4 CPAPDCG 10
CPA CG
Sbjct: 171 CPAAFCG 177


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 430 WCGKRECG 437


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CRWCPAPDCG 10
C CP CG
Sbjct: 97 CNLCPKRICG 106


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 430 WCGKRECG 437


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WCPAPDCG 10
WC CG
Sbjct: 427 WCGEESCG 434


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 WCPAPDCG 10
WC CG
Sbjct: 427 WCGEESCG 434


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 RWCPAPDCG 10
+W P D G
Sbjct: 150 KWVPGDDAG 158


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 WCPAPDCG 10
WC +CG
Sbjct: 432 WCGDNNCG 439


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 WCPAPDCG 10
WC CG
Sbjct: 432 WCGQDSCG 439


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 1 CRWCPAPDC 9
C C AP C
Sbjct: 56 CPQCEAPMC 64


>sp|ATGT_METKA|TRNA-GUANINE(15) transglycosylase|Methanopyrus kandleri (strain AV19 /

Query: 2 RWCPA 6
RWCPA
Sbjct: 354 RWCPA 358


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 WCPAPDCG 10
WC CG
Sbjct: 428 WCGEEKCG 435


>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 WCPAPDCG 10
WC CG
Sbjct: 434 WCGRESCG 441


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 4 CPAPDCG 10
CP DCG
Sbjct: 384 CPGKDCG 390


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 WCPAPDC 9
WC DC
Sbjct: 434 WCGDQDC 440


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 WCPAPDC 9
WC DC
Sbjct: 434 WCGDQDC 440




45|Sequence|221|230|APDCGYAVIA

>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APDCGYAVI 9
+PD GYA++
Sbjct: 252 SPDLGYAIV 260


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PDCGYAVI 9
P CG+A+I
Sbjct: 99 PYCGFAII 106


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APDCGYAV 8
APD GY +
Sbjct: 22 APDAGYTI 29


>sp|Y1571_ARCFU|UNCHARACTERIZED protein AF_1571|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 APDCGYAV 8
APD GY +
Sbjct: 53 APDAGYII 60


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 PDCGYAVI 9
PD YAVI
Sbjct: 334 PDISYAVI 341


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 PDCGYAVI 9
P+CGY I
Sbjct: 326 PECGYENI 333


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PDCGYAVIA 10
P CGY +A
Sbjct: 402 PKCGYIHVA 410


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 1 APDCGYAV 8
P CGYAV
Sbjct: 119 GPLCGYAV 126


>sp|METE_SACS2|METHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|METE_SACI7|METHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|METE_SACI6|METHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|METE_SACI4|METHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|METE_SACI3|METHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|METE_SACI2|METHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|METE_SACI1|METHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PDCGYAVIA 10
PDCG +++
Sbjct: 294 PDCGLKLLS 302


>sp|ARGDC_HYPBU|ARGININE decarboxylase proenzyme|Hyperthermus butylicus (strain DSM 5456

Query: 2 PDCGYAVI 9
PD GYA +
Sbjct: 89 PDYGYATV 96


>sp|Y882_METJA|PROBABLE S-adenosylmethionine-dependent methyltransferase

Query: 4 CGYAVIA 10
CGY VI
Sbjct: 64 CGYGVIG 70


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PDCGYAVIA 10
P CG V+A
Sbjct: 413 PKCGNVVVA 421


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 PDCGYAVI 9
PDC Y ++
Sbjct: 340 PDCCYTIL 347


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 CGYAVIA 10
C YAVIA
Sbjct: 382 CEYAVIA 388


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 4 CGYAVI 9
CGY+VI
Sbjct: 398 CGYSVI 403


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 2 PDCGYAV 8
P CGY +
Sbjct: 247 PKCGYRI 253


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PDCGYAVI 9
PD YAVI
Sbjct: 240 PDAEYAVI 247


>sp|RPO12_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus shibatae (strain ATCC

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus solfataricus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DCGYAVI 9
D GYAVI
Sbjct: 338 DLGYAVI 344


>sp|RPO12_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfurisphaera tokodaii (strain DSM

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYKII 34


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 2 PDCGYAVI 9
P CGY +I
Sbjct: 27 PYCGYRII 34




46|Sequence|226|235|YAVIAFGCAS

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 YAVIAFGCAS 10
Y V+A GCA+
Sbjct: 536 YIVVATGCAA 545


>sp|Y404_METJA|UNCHARACTERIZED protein MJ0404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AVIAFGC 8
A IAFGC
Sbjct: 91 APIAFGC 97


>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VIAFGCAS 10
V+ FGC S
Sbjct: 149 VLVFGCTS 156


>sp|RISB_ARCFU|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVIAFGC 8
AV+A GC
Sbjct: 63 AVVAIGC 69


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 YAVIAFGCAS 10
Y V+A GC +
Sbjct: 531 YIVVATGCMA 540


>sp|Y1297_METTP|UPF0280 protein Mthe_1297|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 IAFGCAS 10
I+FGCA
Sbjct: 157 ISFGCAD 163




47|Sequence|231|240|FGCASCPKLT

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 GCASCP 7
GCA+CP
Sbjct: 1725 GCATCP 1730


>sp|UDGB_PYRAE|TYPE-5 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CASCPKL 9
CA CP+L
Sbjct: 23 CARCPRL 29


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FGCASCPKL 9
+ CA CP +
Sbjct: 258 YACARCPYM 266


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 FGCASCPKL 9
F A CPKL
Sbjct: 169 FDFAGCPKL 177


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 3 CASCP 7
CA+CP
Sbjct: 150 CATCP 154


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 FGCASCPKLT 10
+ C SCP+ T
Sbjct: 235 YHCPSCPERT 244


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CASCPKLT 10
CA C K+T
Sbjct: 198 CAECGKIT 205


>sp|Y486_METJA|UNCHARACTERIZED protein MJ0486|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCASCPKL 9
GC CP++
Sbjct: 57 GCIFCPEM 64


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FGCASCPKLT 10
GC++ PK T
Sbjct: 692 LGCSNYPKCT 701


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 2 GCASCPKL 9
GCA C K+
Sbjct: 604 GCAVCAKI 611


>sp|THIRX_METTH|THIOREDOXIN thermautotrophicus (strain ATCC 29096

Query: 2 GCASCPKL 9
GCA+C L
Sbjct: 10 GCANCQML 17


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FGCASCPK 8
+GC++ PK
Sbjct: 698 YGCSNYPK 705


>sp|DMRX_METJA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanocaldococcus jannaschii (strain ATCC

Query: 1 FGCASCPKL 9
GC +C K+
Sbjct: 189 LGCGNCKKV 197


>sp|RL34_METVS|LARGE ribosomal subunit protein eL34|Methanococcus vannielii (strain

Query: 1 FGCASCPK 8
FG A CPK
Sbjct: 69 FGGALCPK 76




48|Sequence|236|245|CPKLTCGREG

>sp|R1PKT_HALXS|ATP-DEPENDENT ribose-1-phosphate kinase|Halopiger xanaduensis (strain DSM 18323

Query: 1 CPKLTCGREG 10
C LT GREG
Sbjct: 268 CGALTAGREG 277


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPKLTCGRE 9
CPKL C E
Sbjct: 415 CPKLLCFAE 423


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPKLTCGRE 9
CPK CG E
Sbjct: 100 CPKRICGYE 108


>sp|HIS81_ARCFU|HISTIDINOL-PHOSPHATE aminotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KLTCGRE 9
KL+CG+E
Sbjct: 92 KLSCGKE 98


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LTCGREG 10
+ CGREG
Sbjct: 456 VVCGREG 462


>sp|DAPB_METAC|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 CGREG 10
CGREG
Sbjct: 187 CGREG 191


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 CGREG 10
CGREG
Sbjct: 201 CGREG 205


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 3 KLTCGREG 10
KLT GR+G
Sbjct: 229 KLTIGRDG 236


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KLTCGREG 10
KLT GR+G
Sbjct: 229 KLTIGRDG 236


>sp|ACDB2_METMA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina mazei

Query: 1 CPKLTCG 7
CP +CG
Sbjct: 274 CPHTSCG 280


>sp|TRPB2_ARCFU|TRYPTOPHAN synthase beta chain 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CPKLTCG 7
CP LT G
Sbjct: 298 CPTLTAG 304




49|Sequence|241|250|CGREGCGTEF

>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CGREGCGTE 9
CGRE CG E
Sbjct: 435 CGRESCGLE 443


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CGREGCGT 8
CG EGC T
Sbjct: 436 CGDEGCET 443


>sp|SYP_METAR|PROLINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 CGREGCGTE 9
CG + CG E
Sbjct: 427 CGEKACGLE 435


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CGREGCG 7
CG E CG
Sbjct: 428 CGEESCG 434


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 CGREGCG 7
CG E CG
Sbjct: 428 CGEESCG 434


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 CGREGCGTEF 10
CG E CG +
Sbjct: 429 CGEEKCGLDL 438


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 CGREGCGTEF 10
CGRE C +
Sbjct: 432 CGREECADDL 441


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CGREGCGTE 9
CG E CG +
Sbjct: 436 CGEEECGMD 444


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 1 CGREGCG 7
CG+ GCG
Sbjct: 6 CGKGGCG 12


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 REGCGTEF 10
RE C T+F
Sbjct: 39 REACATDF 46


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CGREGCG 7
CG E CG
Sbjct: 429 CGEEECG 435


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CGREGCG 7
CG E CG
Sbjct: 428 CGEEECG 434


>sp|GLYA_META3|SERINE hydroxymethyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 REGCGTEF 10
RE C T+F
Sbjct: 39 REACATDF 46


>sp|SYP_METS5|PROLINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 CGREGCG 7
CG++ CG
Sbjct: 433 CGQDSCG 439


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 REGCG 7
REGCG
Sbjct: 785 REGCG 789


>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 2 GREGCG 7
GRE CG
Sbjct: 164 GRESCG 169


>sp|IORA_ARCFU|INDOLEPYRUVATE oxidoreductase subunit IorA|Archaeoglobus fulgidus (strain ATCC

Query: 5 GCGTEF 10
GCG EF
Sbjct: 511 GCGVEF 516


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CGREGCG 7
CG++ CG
Sbjct: 431 CGKKECG 437


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 CGREGC 6
CG EGC
Sbjct: 85 CGGEGC 90


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain

Query: 1 CGREGC 6
CG EGC
Sbjct: 85 CGGEGC 90


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CGREGCGTE 9
CG E C E
Sbjct: 432 CGDEACEAE 440


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CGREGCG 7
CG+ CG
Sbjct: 431 CGKRECG 437


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CGREGCG 7
CG+ CG
Sbjct: 431 CGKRECG 437


>sp|HIS6_NATPD|IMIDAZOLE glycerol phosphate synthase subunit|Natronomonas pharaonis (strain

Query: 2 GREGCGTE 9
GREG GT+
Sbjct: 165 GREGTGTD 172


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 1 CGREGC 6
CG EGC
Sbjct: 84 CGGEGC 89


>sp|DPO4_METMJ|DNA polymerase IV|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GREGC 6
GREGC
Sbjct: 242 GREGC 246




50|Sequence|246|255|CGTEFCYHCK

>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 1 CGTEFCYH 8
CGT FC H
Sbjct: 205 CGTNFCIH 212


>sp|MOAA_META3|PROBABLE GTP 3',8-cyclase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TEFCYHC 9
TEFC HC
Sbjct: 242 TEFCSHC 248


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 3 TEFCYHC 9
TEFC HC
Sbjct: 240 TEFCEHC 246


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 3 TEFCYHC 9
TEFC HC
Sbjct: 240 TEFCNHC 246


>sp|MOAA_METVS|PROBABLE GTP 3',8-cyclase|Methanococcus vannielii (strain ATCC 35089

Query: 3 TEFCYHC 9
TEFC HC
Sbjct: 239 TEFCGHC 245


>sp|MOAA_METJA|PROBABLE GTP 3',8-cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 TEFCYHC 9
+EFC HC
Sbjct: 240 SEFCMHC 246


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 3 TEFCYHC 9
TEFC HC
Sbjct: 240 TEFCGHC 246


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 3 TEFCYHC 9
TEFC HC
Sbjct: 240 TEFCGHC 246


>sp|MOAA_METMA|PROBABLE GTP 3',8-cyclase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 TEFCYHC 9
+EFC HC
Sbjct: 266 SEFCAHC 272


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TEFCYHC 9
+EFC HC
Sbjct: 266 SEFCAHC 272


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CGTEFC 6
CG EFC
Sbjct: 411 CGVEFC 416


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CGTEFC 6
CG EFC
Sbjct: 410 CGVEFC 415


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TEFCYHC 9
T FC HC
Sbjct: 242 TAFCMHC 248


>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 2 GTEFCYH 8
GTEF YH
Sbjct: 14 GTEFVYH 20


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTEFCYH 8
GTEF YH
Sbjct: 14 GTEFVYH 20


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 5 FCYHCK 10
FCY C+
Sbjct: 2 FCYQCE 7


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 2 GTEFCYH 8
GT FC H
Sbjct: 204 GTNFCVH 210


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter thermautotrophicus

Query: 2 GTEFCYH 8
GT FC H
Sbjct: 206 GTNFCIH 212


>sp|PURP_METJA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocaldococcus jannaschii (strain

Query: 2 GTEFCYH 8
GT FC H
Sbjct: 204 GTNFCIH 210


>sp|MOAA_THEVO|PROBABLE GTP 3',8-cyclase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EFCYHC 9
+FC HC
Sbjct: 251 DFCAHC 256


>sp|MOAA_THEAC|PROBABLE GTP 3',8-cyclase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 EFCYHC 9
+FC HC
Sbjct: 251 DFCAHC 256


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 4 EFCYHCK 10
+FC HC+
Sbjct: 168 DFCTHCE 174


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 FCYHC 9
FCY C
Sbjct: 2 FCYQC 6


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CGTEFC 6
CG +FC
Sbjct: 411 CGVDFC 416


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CGTEFC 6
CG +FC
Sbjct: 411 CGVDFC 416


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CGTEFCYHC 9
CG C HC
Sbjct: 253 CGIGKCGHC 261


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 2 GTEFCYHCK 10
G CY+C+
Sbjct: 461 GDNICYNCQ 469


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 2 GTEFC 6
GTEFC
Sbjct: 413 GTEFC 417


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 5 FCYHCK 10
FC+ CK
Sbjct: 388 FCWRCK 393


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 FCYHCK 10
FC+ CK
Sbjct: 388 FCWRCK 393


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 FCYHC 9
FCY C
Sbjct: 391 FCYRC 395


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 FCYHC 9
FCY C
Sbjct: 391 FCYRC 395


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 FCYHC 9
FCY C
Sbjct: 391 FCYRC 395


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 CGTEFCYHC 9
CGTE +C
Sbjct: 760 CGTETVQYC 768


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 FCYHCK 10
+C HCK
Sbjct: 163 YCPHCK 168


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 5 FCYHC 9
FC HC
Sbjct: 45 FCLHC 49


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 6 CYHCK 10
CY CK
Sbjct: 103 CYECK 107


>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 5 FCYHC 9
FC+HC
Sbjct: 62 FCHHC 66


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GTEFCYHCK 10
GT C CK
Sbjct: 449 GTRMCGSCK 457


>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GTEFCYHCK 10
GT C CK
Sbjct: 395 GTRMCGSCK 403


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CGTEFCYHC 9
CG C HC
Sbjct: 250 CGVGKCGHC 258


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 2 GTEFCYH 8
GT +C H
Sbjct: 204 GTNYCIH 210


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 1 CGTEFCYHCK 10
CG E C +C+
Sbjct: 84 CGGEGCPNCQ 93




51|Sequence|251|260|CYHCKQIWHP

>sp|RMLC_METTH|DTDP-4-DEHYDRORHAMNOSE 3,5-epimerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YHCKQIWHP 10
Y C +++HP
Sbjct: 133 YKCTELYHP 141


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 2 YHCKQIWHP 10
YH + WHP
Sbjct: 234 YHYIESWHP 242


>sp|FLPA_METHJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanospirillum hungatei JF-1

Query: 2 YHCKQIWHP 10
YH +IW P
Sbjct: 21 YHGMRIWDP 29


>sp|AROC_IGNH4|CHORISMATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 HCKQIW 8
HC+++W
Sbjct: 367 HCQRVW 372


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 CKQIWH 9
C+++WH
Sbjct: 771 CEELWH 776


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 2 YHCKQIWHP 10
YHC HP
Sbjct: 114 YHCGNPEHP 122


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HCKQIWHP 10
+CK++ HP
Sbjct: 753 YCKEVNHP 760


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 CYHCKQ 6
CY C+Q
Sbjct: 3 CYQCEQ 8


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 HCKQIW 8
HC+++W
Sbjct: 125 HCEKLW 130


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YHCKQIWHP 10
YHC HP
Sbjct: 116 YHCGTPGHP 124


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CYHCKQ 6
CY C Q
Sbjct: 3 CYQCSQ 8


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 2 YHCKQ 6
YHC+Q
Sbjct: 236 YHCQQ 240


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 2 YHCKQ 6
YHC+Q
Sbjct: 236 YHCQQ 240


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YHCKQIWHP 10
YHC HP
Sbjct: 114 YHCGNPDHP 122


>sp|Y1679_METJA|UNCHARACTERIZED protein MJ1679|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKQIW 8
CK+IW
Sbjct: 56 CKKIW 60


>sp|Y830_METJA|UNCHARACTERIZED protein MJ0830|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYHCKQIW 8
CY CK+++
Sbjct: 91 CYLCKKMF 98


>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 1 CYHCKQI 7
CY+C+++
Sbjct: 140 CYYCERL 146


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 CYHCKQI 7
C HC Q+
Sbjct: 669 CPHCNQL 675


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HCKQIWH 9
H K WH
Sbjct: 288 HVKHAWH 294


>sp|Y550_METJA|UNCHARACTERIZED protein MJ0550|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKQIWH 9
CK IW+
Sbjct: 339 CKNIWN 344


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 1 CYHCK 5
CY CK
Sbjct: 103 CYECK 107


>sp|RL24E_METMA|LARGE ribosomal subunit protein eL24|Methanosarcina mazei (strain ATCC

Query: 1 CYHCKQIWHP 10
CY C Q+ P
Sbjct: 6 CYFCGQMLEP 15


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 CYHCKQ 6
C HCK+
Sbjct: 706 CNHCKR 711


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain

Query: 1 CYHCKQIW 8
CY CK ++
Sbjct: 55 CYICKNLF 62


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYHCK 5
CY CK
Sbjct: 185 CYRCK 189




52|Sequence|256|265|QIWHPNQTCD

>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 2 IWHPNQTCD 10
IW+ N+ CD
Sbjct: 569 IWYRNKLCD 577


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 QIWHPN 6
+IWHP+
Sbjct: 809 EIWHPD 814


>sp|CBIA_METST|COBYRINATE a,c-diamide synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 IWHPNQT 8
IW PN+T
Sbjct: 239 IWSPNKT 245


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 1 QIWHPNQT 8
+IW+PN++
Sbjct: 50 RIWNPNKS 57


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 QIWHPNQT 8
+IW+PN++
Sbjct: 50 RIWNPNKS 57


>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 1 QIWHPNQT 8
+IW+PN++
Sbjct: 50 RIWNPNKS 57


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain

Query: 1 QIWHPNQT 8
+IW+PN++
Sbjct: 48 RIWNPNRS 55


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 QIWHPNQT 8
+IW+PN++
Sbjct: 49 RIWNPNRS 56


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 1 QIWHPNQT 8
+IW+PN++
Sbjct: 51 RIWNPNRS 58


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 27 IGHPDSICD 35


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 27 IGHPDSICD 35


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 27 IGHPDSICD 35


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 27 IGHPDSICD 35


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 27 IGHPDSICD 35


>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 27 IGHPDSICD 35


>sp|METK_HALWD|S-ADENOSYLMETHIONINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 29 IGHPDSICD 37


>sp|XACC_HALVD|PENTONOLACTONASE XacC|Haloferax volcanii (strain ATCC 29605

Query: 2 IWHPNQ 7
+WHP++
Sbjct: 18 VWHPDE 23


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 WHPN 6
WHPN
Sbjct: 469 WHPN 472


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IWHPNQTCD 10
I HP+ CD
Sbjct: 29 IGHPDTICD 37


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 1 QIWHPNQT 8
++W+PN++
Sbjct: 48 RVWNPNKS 55


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 QIWHPNQT 8
++W+PN++
Sbjct: 50 RVWNPNKS 57


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 QIWHPNQT 8
++W+PN++
Sbjct: 50 RVWNPNKS 57


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis

Query: 1 QIWHPNQT 8
++W+PN++
Sbjct: 50 RVWNPNKS 57


>sp|EF1A_IGNH4|ELONGATION factor 1-alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 IWHPN 6
IWHP+
Sbjct: 337 IWHPS 341


>sp|EF1A_HYPBU|ELONGATION factor 1-alpha|Hyperthermus butylicus (strain DSM 5456

Query: 2 IWHPN 6
IWHP+
Sbjct: 335 IWHPS 339


>sp|EF1A_AERPE|ELONGATION factor 1-alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 IWHPN 6
IWHP+
Sbjct: 333 IWHPS 337


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QIWHPNQ 7
++W+P+Q
Sbjct: 354 EVWYPSQ 360


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 29 HPDSICD 35


>sp|METK_METJA|S-ADENOSYLMETHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 29 HPDSICD 35


>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 31 HPDSICD 37


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 31 HPDSICD 37


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IWHP 5
IWHP
Sbjct: 333 IWHP 336


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IWHP 5
IWHP
Sbjct: 333 IWHP 336


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 2 IWHP 5
IWHP
Sbjct: 334 IWHP 337


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IWHP 5
IWHP
Sbjct: 16 IWHP 19


>sp|METK_NATPD|S-ADENOSYLMETHIONINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 HPNQTCD 10
HP+ CD
Sbjct: 31 HPDSLCD 37


>sp|SLAB_METS5|S-LAYER protein B|Metallosphaera sedula (strain ATCC 51363

Query: 2 IWHPNQT 8
++HP QT
Sbjct: 34 VYHPGQT 40


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QIWHP 5
++WHP
Sbjct: 269 RVWHP 273


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 QIWHPNQ 7
Q W PNQ
Sbjct: 21 QDWSPNQ 27




53|Sequence|261|270|NQTCDAARQE

>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum

Query: 1 NQTCDAARQE 10
+Q C A R+E
Sbjct: 31 SQACKAVREE 40




54|Sequence|266|275|AARQERAQSL

***** No hits found ******


55|Sequence|271|280|RAQSLRLRTI

***** No hits found ******


56|Sequence|276|285|RLRTIRSSSI

***** No hits found ******


57|Sequence|281|290|RSSSISYSQE

>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RSSSISYSQE 10
R + ISYS+E
Sbjct: 136 RRNGISYSEE 145


>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RSSSISYSQE 10
R + ISYS+E
Sbjct: 136 RRNGISYSEE 145




58|Sequence|286|295|SYSQESGAAA

>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 2 YSQESGAA 9
Y+QE GAA
Sbjct: 124 YAQERGAA 131




59|Sequence|291|300|SGAAADDIKP

>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 AADDIKP 10
AA+D+KP
Sbjct: 555 AAEDLKP 561




60|Sequence|296|305|DDIKPCPRCA

>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 5 PCPRC 9
PCPRC
Sbjct: 33 PCPRC 37


Query: 1 DDIKPCPRCA 10
D+ CPRC
Sbjct: 756 DEASRCPRCG 765


>sp|PAN_METB6|PROTEASOME-ACTIVATING nucleotidase|Methanoregula boonei (strain DSM 21154

Query: 1 DDIKPCPRC 9
DDIKP RC
Sbjct: 135 DDIKPGARC 143


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 DDIKPCPRCA 10
+D+ CPRC
Sbjct: 145 EDLPKCPRCG 154


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KPCPRCA 10
+PCP+C
Sbjct: 430 EPCPKCG 436


Query: 6 CPRC 9
CPRC
Sbjct: 173 CPRC 176


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DDIKPCP 7
D+ KPCP
Sbjct: 203 DNCKPCP 209


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 2 DIKPCPRC 9
++K CP+C
Sbjct: 352 NLKACPKC 359


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DIKPCPR 8
D PCPR
Sbjct: 191 DTGPCPR 197


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 5 PCPRC 9
PCPRC
Sbjct: 205 PCPRC 209


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 CPRCA 10
CPRCA
Sbjct: 174 CPRCA 178


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DDIKPCPRCA 10
+D+ CP+C
Sbjct: 145 EDLPKCPKCG 154


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 IKPCPRC 9
I CPRC
Sbjct: 181 ISQCPRC 187


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IKPCPRC 9
++ CPRC
Sbjct: 179 VRYCPRC 185


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 IKPCPRC 9
I CPRC
Sbjct: 181 INQCPRC 187


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDIKPCPRCA 10
+D++ CP C
Sbjct: 25 EDVEVCPECG 34


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 IKPCPRC 9
I CPRC
Sbjct: 181 ISQCPRC 187


>sp|RNZ_PYRCJ|RIBONUCLEASE Z|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DIKPCPR 8
D PCPR
Sbjct: 191 DTGPCPR 197


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 4 KPCPRCA 10
K CPRC
Sbjct: 259 KICPRCG 265


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DDIKPCPRCA 10
+D + CP+C
Sbjct: 593 EDRESCPKCG 602


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DIKPCPRC 9
D++ CP+C
Sbjct: 174 DVRTCPQC 181


Query: 4 KPCPRC 9
+ CPRC
Sbjct: 202 QTCPRC 207


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 2 DIKPCPRC 9
D++ CP+C
Sbjct: 178 DVRTCPQC 185


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 2 DIKPCPRC 9
D++ CP+C
Sbjct: 178 DVRTCPQC 185


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DIKPCPRCA 10
D CPRC
Sbjct: 129 DEDKCPRCG 137


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IKPCPRCA 10
I+ CP+C
Sbjct: 356 IQTCPKCG 363


>sp|PYLS_METBU|PYRROLYSINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 KPCPRC 9
KPC RC
Sbjct: 67 KPCKRC 72


>sp|Y931_METLZ|UPF0212 protein Mlab_0931|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 PCPRCA 10
PCP C
Sbjct: 50 PCPYCG 55


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KPCPRCA 10
K CP+C
Sbjct: 18 KKCPKCG 24


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 6 CPRCA 10
CPRC
Sbjct: 258 CPRCG 262


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 6 CPRCA 10
CPRC
Sbjct: 258 CPRCG 262


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 6 CPRCA 10
CPRC
Sbjct: 333 CPRCG 337


>sp|TFE_HYPBU|TRANSCRIPTION factor E|Hyperthermus butylicus (strain DSM 5456

Query: 6 CPRCA 10
CPRC
Sbjct: 136 CPRCG 140


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CPRCA 10
CPRC
Sbjct: 139 CPRCG 143


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 6 CPRCA 10
CPRC
Sbjct: 187 CPRCG 191


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 CPRCA 10
CPRC
Sbjct: 514 CPRCG 518


Query: 6 CPRC 9
CPRC
Sbjct: 189 CPRC 192


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 CPRCA 10
CPRC
Sbjct: 741 CPRCG 745


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 CPRCA 10
CPRC
Sbjct: 739 CPRCG 743


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 CPRCA 10
CPRC
Sbjct: 738 CPRCG 742


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 6 CPRCA 10
CPRC
Sbjct: 719 CPRCG 723


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 CPRCA 10
CPRC
Sbjct: 110 CPRCG 114


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 1 DDIKPCPRCA 10
+D+ CPRC
Sbjct: 187 NDVWICPRCG 196


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CPRCA 10
CPRC+
Sbjct: 153 CPRCS 157


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 CPRC 9
CPRC
Sbjct: 117 CPRC 120


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 6 CPRC 9
CPRC
Sbjct: 425 CPRC 428


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 CPRC 9
CPRC
Sbjct: 186 CPRC 189


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 CPRC 9
CPRC
Sbjct: 121 CPRC 124


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYI_PYRAE|ISOLEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 CPRC 9
CPRC
Sbjct: 185 CPRC 188


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 CPRCA 10
CPRC
Sbjct: 130 CPRCG 134


>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 6 CPRC 9
CPRC
Sbjct: 724 CPRC 727


>sp|Y996_METJA|METALLOPROTEASE MJ0996|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KPCPR 8
KPCP+
Sbjct: 218 KPCPK 222


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 CPRC 9
CPRC
Sbjct: 186 CPRC 189


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|TF2B2_HALSA|TRANSCRIPTION initiation factor IIB 2|Halobacterium salinarum (strain ATCC

Query: 1 DDIKPCPRCA 10
+D+ CP C
Sbjct: 27 EDVLTCPECG 36


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 CPRCA 10
CPRC
Sbjct: 136 CPRCG 140


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 6 CPRC 9
CPRC
Sbjct: 182 CPRC 185


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DDIKPCPRC 9
++IKP RC
Sbjct: 110 EEIKPGARC 118


>sp|DNAJ_METMZ|CHAPERONE protein DnaJ|Methanosarcina mazei (Methanosarcina frisia)

Query: 5 PCPRCA 10
PCP C+
Sbjct: 200 PCPTCS 205


>sp|DNAJ_METMA|CHAPERONE protein DnaJ|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PCPRCA 10
PCP C+
Sbjct: 200 PCPTCS 205


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 6 CPRC 9
CPRC
Sbjct: 181 CPRC 184


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 CPRC 9
CPRC
Sbjct: 149 CPRC 152


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 6 CPRC 9
CPRC
Sbjct: 731 CPRC 734


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 6 CPRCA 10
CPRC
Sbjct: 630 CPRCG 634


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 CPRC 9
CPRC
Sbjct: 175 CPRC 178


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 6 CPRC 9
CPRC
Sbjct: 173 CPRC 176


>sp|RS27A_SACS2|SMALL ribosomal subunit protein eS31|Saccharolobus solfataricus (strain

Query: 4 KPCPRCA 10
K CPRC
Sbjct: 39 KKCPRCG 45


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 6 CPRC 9
CPRC
Sbjct: 728 CPRC 731


>sp|ADPRH_METOA|PROTEIN-ADP-RIBOSE hydrolase|Methanobrevibacter oralis

Query: 1 DDIKPCPRC 9
DD+K RC
Sbjct: 177 DDVKKLERC 185


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 6 CPRC 9
CPRC
Sbjct: 177 CPRC 180


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 DDIKPCP 7
D+IKP P
Sbjct: 475 DEIKPLP 481


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 CPRC 9
CPRC
Sbjct: 208 CPRC 211


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 KPCPRCA 10
K CP+C
Sbjct: 17 KRCPKCG 23


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KPCPRCA 10
K CP+C
Sbjct: 21 KRCPKCG 27


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 CPRC 9
CPRC
Sbjct: 171 CPRC 174


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 CPRC 9
CPRC
Sbjct: 177 CPRC 180


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 6 CPRC 9
CPRC
Sbjct: 171 CPRC 174


>sp|RS14Z_METJA|SMALL ribosomal subunit protein uS14|Methanocaldococcus jannaschii

Query: 2 DIKPCPRCA 10
I+PC RC
Sbjct: 13 GIRPCQRCG 21


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 4 KPCPRC 9
K CP+C
Sbjct: 350 KRCPKC 355


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 6 CPRCA 10
CPRC
Sbjct: 373 CPRCG 377


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 IKPCPRC 9
++ CPRC
Sbjct: 183 VRWCPRC 189


Query: 6 CPRCA 10
CPRC
Sbjct: 452 CPRCG 456


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 6 CPRCA 10
CPRC
Sbjct: 246 CPRCG 250


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 4 KP-CPRCA 10
KP CPRC
Sbjct: 353 KPKCPRCG 360


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 6 CPRC 9
CPRC
Sbjct: 177 CPRC 180


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 6 CPRC 9
CPRC
Sbjct: 208 CPRC 211


>sp|NADK_THEAC|NAD kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KPCPRCA 10
K C RCA
Sbjct: 9 KDCSRCA 15


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 6 CPRCA 10
CPRC
Sbjct: 181 CPRCG 185


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 6 CPRCA 10
CPRC
Sbjct: 130 CPRCG 134


Query: 6 CPRCA 10
CPRC
Sbjct: 149 CPRCG 153


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 2 DIKPCPRCA 10
+I CP+C
Sbjct: 54 EIMKCPKCG 62


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 CPRC 9
CPRC
Sbjct: 186 CPRC 189


>sp|NADK_THEVO|NAD kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KPCPRCA 10
K C RCA
Sbjct: 9 KDCKRCA 15


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CPRC 9
CPRC
Sbjct: 173 CPRC 176


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 6 CPRC 9
CPRC
Sbjct: 184 CPRC 187


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 5 PCPRCA 10
PCP C+
Sbjct: 199 PCPVCS 204


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 4 KPCPRCA 10
+ CPRC
Sbjct: 256 RECPRCG 262


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 IKPCPRC 9
+K CP C
Sbjct: 172 VKYCPEC 178


>sp|LONH_METTH|PUTATIVE lon protease homolog|Methanothermobacter thermautotrophicus (strain

Query: 6 CPRCA 10
CPRC
Sbjct: 145 CPRCG 149


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 CPRC 9
CPRC
Sbjct: 130 CPRC 133


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 CPRC 9
CPRC
Sbjct: 176 CPRC 179


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 6 CPRC 9
CPRC
Sbjct: 679 CPRC 682


>sp|TF2B5_HALSA|TRANSCRIPTION initiation factor IIB 5|Halobacterium salinarum (strain ATCC

Query: 4 KPCPRCA 10
+PCP C
Sbjct: 21 EPCPECG 27


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 6 CPRCA 10
CPRC
Sbjct: 656 CPRCG 660


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 6 CPRCA 10
CPRC
Sbjct: 146 CPRCG 150


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 6 CPRC 9
CPRC
Sbjct: 673 CPRC 676


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 6 CPRC 9
CPRC
Sbjct: 672 CPRC 675


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 6 CPRCA 10
CPRC
Sbjct: 358 CPRCG 362


Query: 6 CPRCA 10
CPRC
Sbjct: 376 CPRCG 380


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 6 CPRCA 10
CPRC
Sbjct: 251 CPRCG 255


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 6 CPRCA 10
CPRC
Sbjct: 652 CPRCG 656


Query: 6 CPRC 9
CPRC
Sbjct: 664 CPRC 667


>sp|RS27A_SULAC|SMALL ribosomal subunit protein eS31|Sulfolobus acidocaldarius (strain

Query: 4 KPCPRCA 10
K CPRC
Sbjct: 33 KKCPRCG 39


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 6 CPRCA 10
CPRC
Sbjct: 1068 CPRCG 1072


>sp|RUBH_METTH|PUTATIVE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 6 CPRCA 10
CPRC
Sbjct: 25 CPRCG 29


>sp|RS27A_SULTO|SMALL ribosomal subunit protein eS31|Sulfurisphaera tokodaii (strain

Query: 4 KPCPRCA 10
K CPRC
Sbjct: 29 KKCPRCG 35


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 DIKPCPRCA 10
++ CP CA
Sbjct: 147 NLPKCPECA 155


>sp|NOP10_THEAC|RIBOSOME biogenesis protein Nop10|Thermoplasma acidophilum (strain ATCC

Query: 3 IKPCPRC 9
I+ CPRC
Sbjct: 5 IRKCPRC 11


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 6 CPRCA 10
CPRC
Sbjct: 126 CPRCG 130


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 6 CPRC 9
CPRC
Sbjct: 175 CPRC 178


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 6 CPRC 9
CPRC
Sbjct: 175 CPRC 178


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PCPRC 9
PCP+C
Sbjct: 56 PCPKC 60


>sp|Y1617_ARCFU|UNCHARACTERIZED protein AF_1617|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KPCPRCA 10
+PCP C
Sbjct: 5 EPCPNCG 11


>sp|RS27A_HYPBU|SMALL ribosomal subunit protein eS31|Hyperthermus butylicus (strain DSM

Query: 4 KPCPRCA 10
K CPRC
Sbjct: 27 KICPRCG 33


>sp|RS27A_METM5|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 4 KPCPRCA 10
K CP+C
Sbjct: 29 KACPKCG 35


>sp|RL44E_THEU7|LARGE ribosomal subunit protein eL42|Thermoproteus uzoniensis (strain

Query: 6 CPRC 9
CPRC
Sbjct: 4 CPRC 7


>sp|NOP10_THESM|RIBOSOME biogenesis protein Nop10|Thermococcus sibiricus (strain DSM 12597

Query: 2 DIKPCPRCA 10
IK CP+C
Sbjct: 4 KIKKCPKCG 12


>sp|RS27A_METJA|SMALL ribosomal subunit protein eS31|Methanocaldococcus jannaschii

Query: 4 KPCPRCA 10
K CPRC
Sbjct: 25 KTCPRCG 31


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 6 CPRC 9
CPRC
Sbjct: 175 CPRC 178


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 CPRC 9
CPRC
Sbjct: 191 CPRC 194


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 5 PCPRCA 10
PCP C
Sbjct: 51 PCPACG 56




61|Sequence|301|310|CPRCAAYIIK

>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 CPRCAAYI 8
CPRCA I
Sbjct: 174 CPRCATAI 181


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CPRCAAYI 8
CPRC A +
Sbjct: 139 CPRCGAML 146


>sp|NOP10_THEAC|RIBOSOME biogenesis protein Nop10|Thermoplasma acidophilum (strain ATCC

Query: 1 CPRCAAYIIK 10
CPRC AY ++
Sbjct: 8 CPRCHAYTME 17


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 CPRCAA 6
CPRC A
Sbjct: 373 CPRCGA 378


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CPRCAA 6
CPRC A
Sbjct: 452 CPRCGA 457


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 1 CPRCAA 6
CPRC A
Sbjct: 358 CPRCGA 363


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAAYI 8
CP C A+I
Sbjct: 5 CPECGAWI 12


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 1 CPRCAA 6
CPRC A
Sbjct: 192 CPRCGA 197


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 CPRCAAYII 9
CP+C A ++
Sbjct: 683 CPKCGANLV 691


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 CPRCAA 6
CPRC A
Sbjct: 728 CPRCNA 733


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 CPRCAA 6
CPRC A
Sbjct: 731 CPRCNA 736


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 CPRCAAYIIK 10
CP C A+ K
Sbjct: 628 CPACGAFTYK 637


Query: 1 CPRCAA 6
CPRC A
Sbjct: 664 CPRCNA 669


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAAYIIK 10
CP C++Y K
Sbjct: 283 CPVCSSYTPK 292


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 CPRCAAYIIK 10
CP C + +IK
Sbjct: 680 CPECGSDLIK 689


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAA 6
CP+C A
Sbjct: 209 CPKCGA 214


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAAYII 9
C +C YI+
Sbjct: 476 CEKCGKYIV 484


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 CPRCAA 6
CP+C A
Sbjct: 740 CPKCGA 745


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CPRCAA 6
CP+C A
Sbjct: 729 CPKCGA 734


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 1 CPRCAA 6
CP+C A
Sbjct: 58 CPKCGA 63


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 1 CPRCAAYII 9
CP C AY I
Sbjct: 62 CPSCHAYFI 70


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAAYII 9
CP+C A +I
Sbjct: 680 CPKCGAKLI 688


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 CPRCAA 6
CP+C A
Sbjct: 128 CPKCGA 133


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 1 CPRCAA 6
CP+C A
Sbjct: 90 CPKCPA 95


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CPRCAAY 7
CP C A+
Sbjct: 23 CPSCGAH 29


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CPRCAAY 7
CP C A+
Sbjct: 23 CPSCGAH 29


>sp|DNLI_CENSY|DNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 PRCAAYIIK 10
PR A YI+K
Sbjct: 148 PRDACYILK 156


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CPRCAAYII 9
CP C A I+
Sbjct: 719 CPYCGAPIL 727


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 CPRCAAYII 9
CP C+A ++
Sbjct: 256 CPLCSAALV 264


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 1 CPRCAAYIIK 10
C RC +IK
Sbjct: 151 CSRCGYLLIK 160


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAAYIIK 10
CP C A +I+
Sbjct: 295 CPNCGALLIE 304


>sp|RNP4_METHJ|RIBONUCLEASE P protein component 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CPRCAAYII 9
C RC AY++
Sbjct: 63 CRRCNAYLV 71


>sp|RL34_METKA|LARGE ribosomal subunit protein eL34|Methanopyrus kandleri (strain AV19

Query: 1 CPRCAAYIIK 10
CP CA +IK
Sbjct: 74 CPECARKLIK 83


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPRCAAYIIK 10
C RC A I K
Sbjct: 84 CDRCGAIIGK 93


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CPRCAAYIIK 10
CP C+A +K
Sbjct: 287 CPHCSAAELK 296


>sp|MTRD_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 CPRCAAYIIK 10
CP C+A + K
Sbjct: 99 CPPCSAKVDK 108


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 CPRCAAYIIK 10
C R A Y+ K
Sbjct: 267 CQRSATYVAK 276


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 1 CPRCAAYIIK 10
C R A Y+ K
Sbjct: 267 CQRSATYVAK 276


>sp|RNP4_PYRAB|RIBONUCLEASE P protein component 4|Pyrococcus abyssi (strain GE5 /

Query: 1 CPRCAAYII 9
C RC A+++
Sbjct: 64 CKRCHAFLV 72




62|Sequence|306|315|AYIIKMNDGS

>sp|RL21_PYRFU|LARGE ribosomal subunit protein eL21|Pyrococcus furiosus (strain ATCC

Query: 1 AYIIKMNDGS 10
AYI+++ DGS
Sbjct: 72 AYIVEIKDGS 81


>sp|RL21_METKA|LARGE ribosomal subunit protein eL21|Methanopyrus kandleri (strain AV19

Query: 1 AYIIKMNDG 9
AYI+K+ DG
Sbjct: 72 AYIVKIRDG 80


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 IIKMNDGS 10
I+K+NDGS
Sbjct: 395 IVKLNDGS 402


>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AYIIKMNDG 9
++I+K+NDG
Sbjct: 98 SFILKINDG 106


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 1 AYIIKMND 8
+YIIK ND
Sbjct: 62 SYIIKTND 69


>sp|SYH_PYRCJ|HISTIDINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YIIKMND 8
Y+IK+ND
Sbjct: 160 YVIKLND 166


>sp|RL21_METS3|LARGE ribosomal subunit protein eL21|Methanobrevibacter smithii (strain

Query: 1 AYIIKMNDGS 10
AYI+ + DG+
Sbjct: 71 AYIVSLTDGN 80


>sp|RL21_THEKO|LARGE ribosomal subunit protein eL21|Thermococcus kodakarensis (strain

Query: 1 AYIIKMNDG 9
AYI+++ DG
Sbjct: 72 AYIVQITDG 80


>sp|RL21_IGNH4|LARGE ribosomal subunit protein eL21|Ignicoccus hospitalis (strain

Query: 1 AYIIKMNDG 9
AY++K+ DG
Sbjct: 73 AYLVKVRDG 81


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AYIIKMND 8
+YI+K+ND
Sbjct: 159 SYIVKIND 166


>sp|RL21_THEGJ|LARGE ribosomal subunit protein eL21|Thermococcus gammatolerans (strain

Query: 1 AYIIKMNDG 9
AYI+++ DG
Sbjct: 72 AYIVEIKDG 80


>sp|AROB_SACS2|3-DEHYDROQUINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 AYIIKMNDGS 10
AY I +NDG
Sbjct: 54 AYFIPINDGE 63


>sp|RL21_METJA|LARGE ribosomal subunit protein eL21|Methanocaldococcus jannaschii

Query: 1 AYIIKMNDG 9
A+I+K+ DG
Sbjct: 72 AFIVKVRDG 80


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 2 YIIKMNDGS 10
YI+++ DGS
Sbjct: 17 YIVELEDGS 25


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 2 YIIKMNDG 9
YI++ NDG
Sbjct: 150 YIVETNDG 157


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 YIIKMNDGS 10
Y++++ DGS
Sbjct: 17 YVVELEDGS 25


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 2 YIIKMNDGS 10
+II++ DGS
Sbjct: 156 FIIELKDGS 164


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 YIIKMNDGS 10
+II M DGS
Sbjct: 158 FIIVMKDGS 166


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YIIKMND 8
Y++K+ND
Sbjct: 160 YVVKIND 166


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 2 YIIKMNDG 9
Y++ M+DG
Sbjct: 56 YVVNMHDG 63


>sp|RL21_PYRHO|LARGE ribosomal subunit protein eL21|Pyrococcus horikoshii (strain ATCC

Query: 1 AYIIKMNDGS 10
AYI+++ DG+
Sbjct: 72 AYIVEVPDGN 81


>sp|RL21_PYRAB|LARGE ribosomal subunit protein eL21|Pyrococcus abyssi (strain GE5 /

Query: 1 AYIIKMNDGS 10
AYI+++ DG+
Sbjct: 72 AYIVEVPDGN 81


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 YIIKMNDGS 10
YI+K N GS
Sbjct: 204 YIVKDNGGS 212


>sp|PIMT_THEON|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 IIKMNDGS 10
+IK+ DGS
Sbjct: 191 VIKLKDGS 198


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 YIIKMNDGS 10
Y++K DG+
Sbjct: 18 YVVKFEDGT 26


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 IIKMNDGS 10
I+K+ DGS
Sbjct: 403 IVKLKDGS 410


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IIKMNDGS 10
I+K+ DGS
Sbjct: 404 IVKLKDGS 411


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 IIKMNDGS 10
I+K+ DGS
Sbjct: 406 IVKLKDGS 413


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 AYIIKMNDG 9
+Y+I M DG
Sbjct: 55 SYVIDMKDG 63


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 2 YIIKMNDGS 10
Y++K DG+
Sbjct: 18 YVVKFEDGT 26


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 2 YIIKMNDGS 10
+I+KM DG+
Sbjct: 277 HILKMKDGA 285


>sp|HIS6_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 2 YIIKMNDGS 10
YI+++ DG+
Sbjct: 146 YIVELEDGT 154


>sp|RL21_ARCFU|LARGE ribosomal subunit protein eL21|Archaeoglobus fulgidus (strain

Query: 1 AYIIKMNDG 9
AY++++ DG
Sbjct: 71 AYLVQVRDG 79


>sp|RL21_METBU|LARGE ribosomal subunit protein eL21|Methanococcoides burtonii (strain

Query: 1 AYIIKMNDGS 10
AY++++ DG+
Sbjct: 71 AYLLQVTDGN 80


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 AYIIKMND 8
AY+ K+ND
Sbjct: 560 AYLTKVND 567


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 AYIIKMNDG 9
+Y+IK+ DG
Sbjct: 512 SYLIKLMDG 520




63|Sequence|311|320|MNDGSCNHMT

>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 3 DGSCNH 8
DG CNH
Sbjct: 167 DGDCNH 172


>sp|Y1674_SULAC|UNCHARACTERIZED protein Saci_1674|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NDGSCNHM 9
NDG C+ M
Sbjct: 94 NDGKCDQM 101


>sp|HEM3_METKA|PROBABLE porphobilinogen deaminase|Methanopyrus kandleri (strain AV19 /

Query: 3 DGSCNHM 9
DGSC H+
Sbjct: 267 DGSCGHV 273


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 DGSCNHMT 10
DG C H+T
Sbjct: 349 DGLCEHLT 356


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MNDGSCNHMT 10
+NDGSC+ ++
Sbjct: 92 LNDGSCSAIS 101


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 3 DGSCNHM 9
DGSCN +
Sbjct: 74 DGSCNKL 80


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus

Query: 1 MNDGSCN 7
+N GSCN
Sbjct: 30 VNSGSCN 36


>sp|ENDA_THEVO|TRNA-SPLICING endonuclease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MNDGSCNHMT 10
M+DG CN ++
Sbjct: 1 MSDGLCNGIS 10


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 MNDGSCNH 8
M DG NH
Sbjct: 95 MTDGKANH 102


>sp|RNP3_NATPD|RIBONUCLEASE P protein component 3|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MNDGSCNHM 9
M DG NH+
Sbjct: 107 MRDGDVNHV 115


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 MNDGSCNHM 9
++DG+ +HM
Sbjct: 846 LSDGAADHM 854


>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71


>sp|CBIM_ARCFU|PUTATIVE cobalt transport protein CbiM|Archaeoglobus fulgidus (strain ATCC

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71


>sp|CBIM2_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71


>sp|CBIM2_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71


>sp|CBIM2_METBF|PUTATIVE cobalt transport protein CbiM|Methanosarcina barkeri (strain

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71


>sp|CBIM1_METLZ|PUTATIVE cobalt transport protein CbiM|Methanocorpusculum labreanum

Query: 4 GSCNHMT 10
GSC+H T
Sbjct: 65 GSCSHPT 71




64|Sequence|316|325|CNHMTCAVCG

>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 2 NHMTCAVCG 10
N+ TC VCG
Sbjct: 130 NNYTCEVCG 138


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 5 TCAVCG 10
TCAVCG
Sbjct: 9 TCAVCG 14


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HMTCAVCG 10
H CA+CG
Sbjct: 464 HEDCAICG 471


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 1 CNHMTCAVC 9
CNH T VC
Sbjct: 108 CNHETGKVC 116


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain

Query: 4 MTCAVC 9
MTCA+C
Sbjct: 25 MTCAMC 30


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 MTCAVC 9
+TCAVC
Sbjct: 192 LTCAVC 197


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 TCAVCG 10
TC VCG
Sbjct: 464 TCGVCG 469


>sp|PYRK_METTH|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanothermobacter

Query: 2 NHMTCAVCG 10
NH AVCG
Sbjct: 180 NHDMAAVCG 188


>sp|RL44E_AERPE|LARGE ribosomal subunit protein eL42|Aeropyrum pernix (strain ATCC

Query: 4 MTCAVCG 10
+TC VCG
Sbjct: 69 ITCTVCG 75


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 6 CAVCG 10
CAVCG
Sbjct: 461 CAVCG 465


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 6 CAVCG 10
CAVCG
Sbjct: 173 CAVCG 177


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 6 CAVCG 10
CAVCG
Sbjct: 173 CAVCG 177


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 6 CAVCG 10
CAVCG
Sbjct: 173 CAVCG 177


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 6 CAVCG 10
CAVCG
Sbjct: 95 CAVCG 99


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 TCAVCG 10
TC VCG
Sbjct: 19 TCKVCG 24


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 TCAVCG 10
TC VCG
Sbjct: 82 TCPVCG 87


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 5 TCAVCG 10
TC VCG
Sbjct: 256 TCPVCG 261


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 5 TCAVCG 10
TC VCG
Sbjct: 21 TCPVCG 26


>sp|RAD50_SACS2|DNA double-strand break repair Rad50|Saccharolobus solfataricus (strain

Query: 5 TCAVCG 10
TC VCG
Sbjct: 425 TCPVCG 430


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 5 TCAVCG 10
TC VCG
Sbjct: 436 TCPVCG 441


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 5 TCAVCG 10
TC VCG
Sbjct: 1728 TCPVCG 1733


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 4 MTCAVCG 10
M C VCG
Sbjct: 1 MECPVCG 7


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 HMTCAVCG 10
H TC CG
Sbjct: 141 HGTCPYCG 148


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 5 TCAVCG 10
TC VCG
Sbjct: 72 TCPVCG 77


Query: 1 CNHMTCAVCG 10
C M C CG
Sbjct: 53 CEIMKCPKCG 62


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 18 HAACAGCG 25


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 18 HAACAGCG 25


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 18 HAACAGCG 25


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri

Query: 5 TCAVCG 10
TCA CG
Sbjct: 48 TCAACG 53


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 5 TCAVCG 10
TCA CG
Sbjct: 48 TCAACG 53


>sp|PUS10_THEAM|TRNA pseudouridine synthase Pus10|Thermosphaera aggregans (strain DSM

Query: 2 NHMTCAVCG 10
N TC +CG
Sbjct: 99 NPKTCFICG 107


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 2 NHMTCAVC 9
N +TC VC
Sbjct: 33 NTITCPVC 40


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NHMTCAVCG 10
N +TC CG
Sbjct: 123 NDITCPECG 131


>sp|KORB_METTM|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter marburgensis (strain

Query: 3 HMTCAVCG 10
H+ CA CG
Sbjct: 19 HIFCAGCG 26


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain

Query: 2 NHMTCAVC 9
N +TC VC
Sbjct: 33 NTVTCPVC 40


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 MTCAVCG 10
M C VCG
Sbjct: 459 MRCLVCG 465


>sp|BPS2_ACIAM|PROTEIN bps2|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 5 TCAVCG 10
TC VCG
Sbjct: 291 TCYVCG 296


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 6 CAVCG 10
CA+CG
Sbjct: 484 CAICG 488


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 6 CAVCG 10
CA+CG
Sbjct: 484 CAICG 488


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 6 CAVCG 10
CA+CG
Sbjct: 178 CAICG 182


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 6 CAVCG 10
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 6 CAVCG 10
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 6 CAVCG 10
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 6 CAVCG 10
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 6 CAVCG 10
CA+CG
Sbjct: 186 CAICG 190


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 5 TCAVCG 10
TC++CG
Sbjct: 404 TCSMCG 409


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 TCAVCG 10
TC +CG
Sbjct: 173 TCKICG 178


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 TCAVCG 10
TC +CG
Sbjct: 140 TCPICG 145


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 5 TCAVCG 10
TC +CG
Sbjct: 135 TCPICG 140


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 6 CAVCG 10
CA+CG
Sbjct: 37 CAICG 41


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 CNHMTCAVC 9
CN C VC
Sbjct: 142 CNGEGCEVC 150


>sp|KORB_METTH|2-OXOGLUTARATE synthase subunit KorB|Methanothermobacter thermautotrophicus

Query: 3 HMTCAVCG 10
H+ CA CG
Sbjct: 19 HIFCAGCG 26


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 CNHMTCAVCG 10
C HM C + G
Sbjct: 196 CLHMACRMQG 205


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CNHMTCAVC 9
CNH VC
Sbjct: 106 CNHEPGTVC 114


>sp|Y323_METJA|UNCHARACTERIZED protein MJ0323|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HMTCAVCG 10
H TCAVC
Sbjct: 77 HATCAVCA 84


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 6 CAVCG 10
CA+CG
Sbjct: 37 CAICG 41


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 5 TCAVCG 10
TC+ CG
Sbjct: 221 TCSTCG 226


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 5 TCAVCG 10
TC+ CG
Sbjct: 221 TCSTCG 226


>sp|Y2328_HALVD|UNCHARACTERIZED isochorismatase family protein HVO_2328|Haloferax volcanii (strain

Query: 2 NHMTCAVCG 10
+H T VCG
Sbjct: 109 DHSTLVVCG 117


>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 TCAVC 9
TCA+C
Sbjct: 473 TCAIC 477


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 6 CAVCG 10
CA+CG
Sbjct: 36 CAICG 40


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 NHMTCAVC 9
N TC VC
Sbjct: 34 NENTCPVC 41


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 13 HRGCAGCG 20


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 13 HRGCAGCG 20


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 16 HRGCAGCG 23


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 TCAVCG 10
TC +CG
Sbjct: 407 TCTMCG 412


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 TCAVCG 10
TC +CG
Sbjct: 407 TCTMCG 412


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 HMTCAVCG 10
HMTC G
Sbjct: 133 HMTCFTMG 140


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 HMTCAVCG 10
HMTC G
Sbjct: 133 HMTCFTMG 140


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 HMTCAVCG 10
HMTC G
Sbjct: 141 HMTCFTMG 148


>sp|RL34_PYRAB|LARGE ribosomal subunit protein eL34|Pyrococcus abyssi (strain GE5 /

Query: 6 CAVCG 10
CA+CG
Sbjct: 36 CAICG 40


>sp|RS27_HALMA|SMALL ribosomal subunit protein eS27|Haloarcula marismortui (strain

Query: 2 NHMTCAVCG 10
+ ++CAVCG
Sbjct: 25 SEVSCAVCG 33


>sp|RPO3_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo3|Archaeoglobus fulgidus (strain ATCC

Query: 2 NHMTCAVCG 10
N M C++CG
Sbjct: 199 NVMACSMCG 207


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 5 TCAVCG 10
TC +CG
Sbjct: 87 TCGICG 92


>sp|RL37_METHJ|LARGE ribosomal subunit protein eL37|Methanospirillum hungatei JF-1

Query: 2 NHMTCAVCG 10
H+TC CG
Sbjct: 15 THLTCRRCG 23


>sp|RS27_NATPD|SMALL ribosomal subunit protein eS27|Natronomonas pharaonis (strain

Query: 2 NHMTCAVCG 10
N + CAVCG
Sbjct: 25 NTVNCAVCG 33


>sp|RL37_METM7|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 NHMTCAVCG 10
NH+ C CG
Sbjct: 16 NHIVCRRCG 24


>sp|RL37_METM5|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 NHMTCAVCG 10
NH+ C CG
Sbjct: 16 NHIVCRRCG 24


>sp|RL37_METMP|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 NHMTCAVCG 10
NH+ C CG
Sbjct: 16 NHIVCRRCG 24


>sp|RL37_METM6|LARGE ribosomal subunit protein eL37|Methanococcus maripaludis (strain

Query: 2 NHMTCAVCG 10
NH+ C CG
Sbjct: 16 NHIVCRRCG 24


>sp|RL37_METVS|LARGE ribosomal subunit protein eL37|Methanococcus vannielii (strain

Query: 2 NHMTCAVCG 10
NH+ C CG
Sbjct: 16 NHIVCRRCG 24


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HMTCAVCG 10
H CA CG
Sbjct: 11 HDVCAACG 18


>sp|RL34_THEPD|LARGE ribosomal subunit protein eL34|Thermofilum pendens (strain DSM

Query: 6 CAVCG 10
CA+CG
Sbjct: 37 CAICG 41


>sp|RL37_META3|LARGE ribosomal subunit protein eL37|Methanococcus aeolicus (strain

Query: 2 NHMTCAVCG 10
NH+ C CG
Sbjct: 16 NHIICRRCG 24


>sp|RL37_METMJ|LARGE ribosomal subunit protein eL37|Methanoculleus marisnigri (strain

Query: 2 NHMTCAVCG 10
H CA CG
Sbjct: 30 QHKVCAACG 38


>sp|NOP10_PYRAB|RIBOSOME biogenesis protein Nop10|Pyrococcus abyssi (strain GE5 /

Query: 5 TCAVCG 10
TC VCG
Sbjct: 19 TCPVCG 24


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 2 NHMTCAVCG 10
N CA CG
Sbjct: 139 NMAACAYCG 147


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 CNHMTCAVCG 10
CN + CA G
Sbjct: 478 CNAIACAEAG 487




65|Sequence|321|330|CAVCGCEFCW

>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CAVCGCEFC 9
C++CG EFC
Sbjct: 408 CSMCGVEFC 416


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CAVCGCEFC 9
C++CG EFC
Sbjct: 407 CSMCGVEFC 415


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CAVCGCEFC 9
C++CG +FC
Sbjct: 408 CSMCGVDFC 416


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CAVCGCEFC 9
C++CG +FC
Sbjct: 408 CSMCGVDFC 416


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CAVCGCEFCW 10
CAVCG E W
Sbjct: 461 CAVCGREAKW 470


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 6 CEFCW 10
CE+CW
Sbjct: 69 CEYCW 73


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 CAVCGCEFCW 10
C+VCG E W
Sbjct: 330 CSVCGYENKW 339


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 CAVCGCEFCW 10
C+VCG E W
Sbjct: 330 CSVCGYENKW 339


>sp|Y751_METJA|TNPB-LIKE protein MJ0751|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CAVCGCEF 8
C +CGC+
Sbjct: 222 CPICGCKL 229


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CAVCGCEFCW 10
CAVCG + W
Sbjct: 173 CAVCGSKPEW 182


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CAVCGCEFCW 10
CAVCG + W
Sbjct: 173 CAVCGSKPEW 182


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CAVCGCEFCW 10
CAVCG + W
Sbjct: 173 CAVCGSKPEW 182


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CAVCGC 6
CA CGC
Sbjct: 61 CAKCGC 66


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CAVCGCEFCW 10
CA+CG + W
Sbjct: 173 CAICGSKPEW 182


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CAVCGCEF--------CW 10
C VCG E CW
Sbjct: 440 CPVCGAEIEPVTDVLDCW 457


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CAVCGCEF--------CW 10
C VCG E CW
Sbjct: 440 CPVCGAEIEPVTDVLDCW 457


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 CAVCGCEF--------CW 10
C VCG E CW
Sbjct: 440 CPVCGAEIEPVTDVLDCW 457


>sp|RL34_METJA|LARGE ribosomal subunit protein eL34|Methanocaldococcus jannaschii

Query: 1 CAVCGCEF 8
CA+CG E
Sbjct: 37 CAICGAEL 44


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 CAVCGCEF 8
C VCG +F
Sbjct: 45 CIVCGIDF 52


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CAVCGCEFCW 10
CA+CG W
Sbjct: 173 CAICGSRPEW 182


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 3 VCGCEFC 9
VCG FC
Sbjct: 204 VCGTNFC 210


>sp|Y834_PYRAB|UPF0212 protein PYRAB08340|Pyrococcus abyssi (strain GE5 /

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y350_THEON|UPF0212 protein TON_0350|Thermococcus onnurineus (strain NA1)

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1486_PYRFU|UPF0212 protein PF1486|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1344_THEGJ|UPF0212 protein TGAM_1344|Thermococcus gammatolerans (strain DSM 15229

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1312_PYRHO|UPF0212 protein PH1312|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|Y1194_THEKO|UPF0212 protein TK1194|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGAHF 59


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 AVC--GCEFCW 10
++C GC FC+
Sbjct: 55 SICTRGCRFCY 65


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CAVCGCEFCW 10
CA CG W
Sbjct: 173 CAFCGSRPVW 182


>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 GCEFCW 10
GC FC+
Sbjct: 58 GCRFCY 63


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 5 GCEFCW 10
GC FC+
Sbjct: 61 GCRFCY 66


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 CAVCGCEFCW 10
CA+CG W
Sbjct: 186 CAICGSTPEW 195


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 1 CAVCG---CEFC 9
C VCG CE C
Sbjct: 221 CRVCGGRGCERC 232


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 CAVCGCE 7
CA+CG E
Sbjct: 484 CAICGDE 490


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CAVCGCE 7
CA+CG E
Sbjct: 484 CAICGDE 490


>sp|TFE_PYRAE|TRANSCRIPTION factor E|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CAVCGCEF 8
C VCG E
Sbjct: 141 CPVCGAEL 148


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 CAVCGCEF 8
C VCG E
Sbjct: 464 CPVCGAEL 471


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GCEFC 9
GCE+C
Sbjct: 618 GCEYC 622


>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CAVCGCEFC 9
C CG E C
Sbjct: 92 CQACGFESC 100


>sp|FDHB_METTF|F420-DEPENDENT formate dehydrogenase subunit beta|Methanothermobacter

Query: 1 CAVCGCEFC 9
C +C CE C
Sbjct: 305 CPICYCEEC 313


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 CAVCG 5
CAVCG
Sbjct: 10 CAVCG 14


>sp|PUS10_AERPE|TRNA pseudouridine synthase Pus10|Aeropyrum pernix (strain ATCC 700893

Query: 1 CAVCG 5
CAVCG
Sbjct: 95 CAVCG 99


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 CAVCGCEF 8
CA C C F
Sbjct: 276 CAFCYCPF 283


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 463 CPVCGAE 469


>sp|GUAAA_METJA|GMP synthase [glutamine-hydrolyzing] subunit A|Methanocaldococcus

Query: 1 CAVCGCEF 8
C VCG +F
Sbjct: 180 CKVCGYKF 187


>sp|COFH2_METMP|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanococcus maripaludis (strain

Query: 3 VC--GCEFC 9
VC GC+FC
Sbjct: 58 VCTMGCKFC 66


>sp|Y1358_THESM|UPF0212 protein TSIB_1358|Thermococcus sibiricus (strain DSM 12597

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 52 CPVCGSPF 59


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 143 CPVCGSE 149


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CAVCGCEF 8
C VCG E
Sbjct: 148 CDVCGAEL 155


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 CGCEFC 9
C CE C
Sbjct: 273 CSCEVC 278


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 173 CMVCGSE 179


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CAVCGCEFC 9
C V GC C
Sbjct: 18 CCVVGCVTC 26


>sp|FDHD_SULTO|SULFUR carrier protein FdhD|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CAVCGCEFCW 10
C VCG F +
Sbjct: 103 CGVCGRAFLY 112


>sp|FDHD_SACS2|SULFUR carrier protein FdhD|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CAVCGCEFCW 10
C VCG F +
Sbjct: 105 CGVCGRAFLY 114


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CAVCG 5
CA+CG
Sbjct: 467 CAICG 471


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 CAVCG 5
CA+CG
Sbjct: 178 CAICG 182


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 CAVCG 5
CA+CG
Sbjct: 173 CAICG 177


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 CAVCG 5
CA+CG
Sbjct: 173 CAICG 177


>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 1 CAVCG 5
CA+CG
Sbjct: 37 CAICG 41


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 1 CAVCGCEF 8
C VCG +F
Sbjct: 180 CKVCGFKF 187


>sp|YBP3_ACIAM|UNCHARACTERIZED 17.7 kDa protein in|Acidianus ambivalens (Desulfurolobus

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 144 CPVCGME 150


>sp|KAD_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CAVCGCEF 8
C VCG E
Sbjct: 148 CDVCGSEL 155


>sp|NOB1_ARCFU|ENDORIBONUCLEASE Nob1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 145 CPVCGSE 151


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 1 CAVCGCEFC 9
C GCE C
Sbjct: 230 CRGKGCELC 238


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 20 CKVCGSYF 27


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 AVCGCEF 8
A CGC+
Sbjct: 26 ATCGCQL 32


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 313 CFVCGAE 319


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 313 CFVCGAE 319


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 313 CFVCGAE 319


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 CAVCGCEFC 9
C VCG C
Sbjct: 1729 CPVCGWSKC 1737


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 5 GCEFC 9
GC FC
Sbjct: 63 GCRFC 67


>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GCEFC 9
GC FC
Sbjct: 455 GCSFC 459


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GCEFC 9
GC FC
Sbjct: 224 GCSFC 228


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GCEFC 9
GC FC
Sbjct: 337 GCSFC 341


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 GCEFC 9
GC FC
Sbjct: 302 GCSFC 306


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 CAVCGCEFC 9
CA+ GC C
Sbjct: 186 CAMPGCGSC 194


>sp|ARCS_HALVD|ARCHAEOSINE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 CGCEFC 9
C CE C
Sbjct: 189 CACEAC 194


>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VCGCEFCW 10
V CE CW
Sbjct: 53 VSECEKCW 60


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 1 CAVCG 5
CA+CG
Sbjct: 37 CAICG 41


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 5 GCEFC 9
GC FC
Sbjct: 69 GCNFC 73


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 5 GCEFC 9
GC FC
Sbjct: 69 GCNFC 73


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 GCEFC 9
GC FC
Sbjct: 70 GCNFC 74


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 3 VCGCEFC 9
V GC +C
Sbjct: 204 VSGCNYC 210


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 CAVCGCEFC 9
C VCG E C
Sbjct: 82 CEVCGGEGC 90


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 CAVCGCEF 8
C+VCG F
Sbjct: 33 CSVCGRYF 40


>sp|SYA_THEVO|ALANINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CAVCGCEF 8
C VCG F
Sbjct: 23 CRVCGSYF 30


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 1 CAVCG 5
CA+CG
Sbjct: 36 CAICG 40


>sp|SYP_NATPD|PROLINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 465 CGVCGDE 471


>sp|RL34_PYRAB|LARGE ribosomal subunit protein eL34|Pyrococcus abyssi (strain GE5 /

Query: 1 CAVCG 5
CA+CG
Sbjct: 36 CAICG 40


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GCEFC 9
GC FC
Sbjct: 70 GCNFC 74


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 455 CVVCGRE 461


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 1 CAVCGCEFC 9
C GCE C
Sbjct: 152 CGGRGCEAC 160


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 CAVCGCE 7
C VCG E
Sbjct: 330 CRVCGYE 336


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain

Query: 1 CAVCGCEFC 9
C VCG E C
Sbjct: 82 CDVCGGEGC 90


>sp|RL34_THEPD|LARGE ribosomal subunit protein eL34|Thermofilum pendens (strain DSM

Query: 1 CAVCG 5
CA+CG
Sbjct: 37 CAICG 41


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 CAVCGC 6
CA+ GC
Sbjct: 447 CAIMGC 452


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CGCEF 8
CGC F
Sbjct: 127 CGCNF 131


>sp|MTRC_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanopyrus kandleri (strain AV19

Query: 1 CAVCGCEFCW 10
C + G F W
Sbjct: 38 CGILGTAFAW 47




66|Sequence|326|335|CEFCWLCMKE

>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 CEFCWLCMK 9
CE+CW +K
Sbjct: 69 CEYCWRAVK 77


>sp|ASD_METJA|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanocaldococcus

Query: 4 CWLCMKE 10
CWL +KE
Sbjct: 149 CWLSIKE 155


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 2 EFCWLCMKE 10
E CW+C+ +
Sbjct: 94 ENCWVCLGQ 102


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain

Query: 1 CEFCWLCMK 9
C FCW M+
Sbjct: 85 CIFCWRPME 93


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 CEFCWLCMK 9
C FCW M+
Sbjct: 85 CIFCWRPME 93


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EFCWLC 7
E CW C
Sbjct: 177 ELCWRC 182


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 1 CEFCW 5
C +CW
Sbjct: 17 CSYCW 21


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 CEFCWLCMKE 10
C+ C C+ E
Sbjct: 568 CDLCLECLNE 577


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FCWLC 7
FCW C
Sbjct: 388 FCWRC 392


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 FCWLC 7
FCW C
Sbjct: 388 FCWRC 392


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CEFCWLCMKE 10
C+FC++ ++
Sbjct: 50 CKFCYMATQK 59


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EFCWLCMKE 10
EF ++C KE
Sbjct: 458 EFTFICEKE 466


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EFCWLCMKE 10
EF ++C KE
Sbjct: 458 EFTFICEKE 466


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFCWL 6
E+CW+
Sbjct: 29 EYCWI 33


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 1 CEFCWLC 7
C+ C LC
Sbjct: 65 CDMCCLC 71


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 CEFCW 5
C FCW
Sbjct: 66 CIFCW 70


>sp|RL15E_METTH|LARGE ribosomal subunit protein eL15|Methanothermobacter

Query: 5 WLCMKE 10
W+C+K+
Sbjct: 147 WICVKQ 152


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 CEFCWLC 7
C+ C LC
Sbjct: 73 CDMCCLC 79


>sp|ACDD_METJA|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanocaldococcus

Query: 1 CEFCWLCMKE 10
CE+ C+KE
Sbjct: 154 CEWAKKCVKE 163




67|Sequence|331|340|LCMKEISDLH

>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CMKEISDL 9
C KE+SDL
Sbjct: 268 CQKELSDL 275


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 MKEISDLH 10
+KEI+D+H
Sbjct: 15 VKEINDIH 22


>sp|HIS8_METM5|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain C5 /

Query: 3 MKEISDLH 10
M E+S+LH
Sbjct: 58 MNEVSNLH 65


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 LCMKEISDLH 10
L +KEISD +
Sbjct: 697 LSLKEISDAY 706


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 1 LCMKEISDLH 10
+C+ + D+H
Sbjct: 204 ICLDAVKDMH 213


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LCMKEISDLH 10
L MKE+ +LH
Sbjct: 201 LDMKELLELH 210




68|Sequence|336|345|ISDLHYLSPS

>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DLHYLS 8
DLHYLS
Sbjct: 138 DLHYLS 143


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SDLHYLSP 9
+DLHY +P
Sbjct: 275 ADLHYHAP 282


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DLHYLS 8
DLHYLS
Sbjct: 138 DLHYLS 143


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain

Query: 1 ISDLHYLSPS 10
++++HY PS
Sbjct: 36 VAEIHYEDPS 45


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain

Query: 1 ISDLHYLSPS 10
++++HY PS
Sbjct: 36 VAEIHYEDPS 45


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 1 ISDLHYLSP 9
+ DL+YL+P
Sbjct: 109 LRDLNYLAP 117


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HYLSP 9
HYLSP
Sbjct: 54 HYLSP 58


>sp|SYY_METJA|TYROSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISDLHYL 7
++D+HYL
Sbjct: 156 VNDIHYL 162


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 ISDLHYLS 8
+ D+HY+S
Sbjct: 115 VRDIHYVS 122


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 ISDLHYLS 8
+ D+HY+S
Sbjct: 115 VRDIHYVS 122


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 1 ISDLHYL 7
+SD+HY+
Sbjct: 161 LSDVHYI 167




69|Sequence|341|350|YLSPSGCTFW

>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 LSPSGCTFW 10
+SP GC W
Sbjct: 194 ISPDGCRLW 202


>sp|PUR7_THESM|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LSPSGCTFW 10
+SP C FW
Sbjct: 192 ISPDTCRFW 200


>sp|PUR7_THEKO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LSPSGCTFW 10
+SP C FW
Sbjct: 188 ISPDTCRFW 196


>sp|PUR7_PYRHO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LSPSGCTFW 10
+SP C FW
Sbjct: 192 ISPDTCRFW 200


>sp|PUR7_PYRFU|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSPSGCTFW 10
+SP C FW
Sbjct: 188 ISPDTCRFW 196


>sp|PUR7_PYRAB|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LSPSGCTFW 10
+SP C FW
Sbjct: 188 ISPDTCRFW 196


>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 LSPSGCTFW 10
+SP C FW
Sbjct: 195 ISPDTCRFW 203


>sp|GSA_IGNH4|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YLSPSGCTF 9
YL+PSG F
Sbjct: 283 YLTPSGPVF 291


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 4 PSGCTF 9
PSGC F
Sbjct: 30 PSGCCF 35


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 1 YLSPSGCTFW 10
+++P+GC F+
Sbjct: 89 FMTPTGCPFF 98


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 1 YLSPSGCTFW 10
+++P+GC F+
Sbjct: 89 FMTPTGCPFF 98


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 2 LSPSGC 7
+SPSGC
Sbjct: 58 VSPSGC 63


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 2 LSPSGC 7
+SPSGC
Sbjct: 58 VSPSGC 63


>sp|Y73A_ARCFU|UPF0146 protein AF_0739.1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SPSGCTFW 10
+P GC F+
Sbjct: 50 APEGCRFY 57


>sp|AROD_THEAC|3-DEHYDROQUINATE dehydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PSGCTFW 10
P G TFW
Sbjct: 183 PMGRTFW 189


>sp|MALK_THELN|TREHALOSE/MALTOSE import ATP-binding protein MalK|Thermococcus litoralis (strain

Query: 2 LSPSGC 7
L PSGC
Sbjct: 35 LGPSGC 40


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 372 VSASNCTEW 380


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 372 VSASNCTDW 380


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 372 VSASNCTDW 380


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 372 VSASNCTDW 380


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 372 VSASNCTDW 380


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 372 VSASNCTDW 380


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 375 VSASNCTDW 383


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LSPSGCTFW 10
+S S CT W
Sbjct: 375 VSASNCTDW 383


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 LSPSGCTF 9
L P CTF
Sbjct: 455 LKPGSCTF 462


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 1 YLSPSGCTFW 10
+L+P+ FW
Sbjct: 267 FLTPTSGVFW 276




70|Sequence|346|355|GCTFWGKKPW

>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus

Query: 2 CTFWGKKPW 10
C F G+ PW
Sbjct: 18 CKFIGRSPW 26


>sp|NIFD_METBA|NITROGENASE molybdenum-iron protein alpha chain|Methanosarcina barkeri

Query: 4 FWGKKPW 10
+W +KPW
Sbjct: 476 YWAQKPW 482


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 4 FWGKKP 9
WGKKP
Sbjct: 7 LWGKKP 12


>sp|PUR7_METMA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CTFWGKK 8
C FW KK
Sbjct: 197 CRFWDKK 203


>sp|PUR7_METBF|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CTFWGKK 8
C FW KK
Sbjct: 197 CRFWDKK 203


>sp|PUR7_METAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CTFWGKK 8
C FW KK
Sbjct: 197 CRFWDKK 203


>sp|RL30_SACS2|LARGE ribosomal subunit protein uL30|Saccharolobus solfataricus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|QUEC_PYRFU|7-CYANO-7-DEAZAGUANINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GCTFWGKKPW 10
C +W KK +
Sbjct: 17 ACLYWAKKQY 26


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 WGKKPW 10
WG+KP+
Sbjct: 316 WGEKPY 321


>sp|TTUA_PYRHO|TRNA-5-METHYLURIDINE(54) 2-sulfurtransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CTFWGKK 8
C FWG K
Sbjct: 287 CKFWGLK 293


>sp|RL30_SACI7|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|RL30_SACI6|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|RL30_SACI4|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|RL30_SACI3|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|RL30_SACI2|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|RL30_SACI1|LARGE ribosomal subunit protein uL30|Saccharolobus islandicus (strain

Query: 5 WGKKPW 10
W K PW
Sbjct: 13 WAKAPW 18


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM

Query: 5 WGKKPW 10
WG PW
Sbjct: 33 WGHIPW 38


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 5 WGKKPW 10
WG PW
Sbjct: 33 WGHIPW 38


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 FWGKKPW 10
W KPW
Sbjct: 619 LWANKPW 625


>sp|QUEC_THEKO|7-CYANO-7-DEAZAGUANINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GCTFWGKKPW 10
C +W KK +
Sbjct: 16 ACLYWAKKNY 25


>sp|RFCL_PYRIL|REPLICATION factor C large subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 CTFWGKK 8
CT W KK
Sbjct: 42 CTRWAKK 48


>sp|RFCL_PYRAR|REPLICATION factor C large subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 CTFWGKK 8
CT W KK
Sbjct: 42 CTRWAKK 48


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CTFWGKK 8
CT W KK
Sbjct: 42 CTRWAKK 48


>sp|AATC_METBF|A-TYPE ATP synthase subunit C|Methanosarcina barkeri (strain Fusaro /

Query: 4 FWGKKP 9
WG+KP
Sbjct: 7 LWGQKP 12


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 5 WGKKPW 10
WG PW
Sbjct: 33 WGYIPW 38


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 5 WGKKPW 10
WG PW
Sbjct: 33 WGYIPW 38


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GCTFWGK 7
G TFW K
Sbjct: 158 GATFWSK 164


>sp|MT872_AERPE|DNA (cytosine-5-)-methyltransferase M.ApeKI|Aeropyrum pernix (strain

Query: 4 FWGKKP 9
F+GKKP
Sbjct: 435 FYGKKP 440


>sp|UVRB_METTH|UVRABC system protein B|Methanothermobacter thermautotrophicus (strain

Query: 5 WGKKP 9
WG+KP
Sbjct: 316 WGEKP 320


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 WGKKP 9
WGK+P
Sbjct: 155 WGKEP 159


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCTFWG 6
GC WG
Sbjct: 229 GCMVWG 234


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GCTFWG 6
GC WG
Sbjct: 227 GCLVWG 232


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GCTFWG 6
GC WG
Sbjct: 231 GCLVWG 236


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GCTFWG 6
GC WG
Sbjct: 231 GCLVWG 236


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GCTFWG 6
GC WG
Sbjct: 229 GCLVWG 234


>sp|ISF2_ARCFU|IRON-SULFUR flavoprotein AF_1519|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GCTFWGK 7
G TFW +
Sbjct: 156 GATFWSR 162


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 FWGKK 8
+WGKK
Sbjct: 116 YWGKK 120


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 GCTFWGKK 8
G TF+G+K
Sbjct: 148 GITFYGEK 155


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 FWGKK 8
+WGKK
Sbjct: 359 YWGKK 363


>sp|PHR_METTM|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 FWGKK 8
+WGKK
Sbjct: 359 YWGKK 363




71|Sequence|351|360|GKKPWSRKKK

>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 KKPWSRKKK 10
+KPW RK++
Sbjct: 462 EKPWERKER 470


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GKKPWSRKK 9
KKP+SR K
Sbjct: 249 AKKPYSRSK 257


>sp|DHQS_METS3|3-DEHYDROQUINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 KPWSRKKK 10
KPW KK+
Sbjct: 5 KPWDDKKE 12


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KPWSRKKK 10
KP++RKK+
Sbjct: 277 KPFTRKKR 284


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 GKKPWSRKKK 10
GKKP R+K+
Sbjct: 180 GKKPSKRQKE 189


>sp|Y3543_METJA|UNCHARACTERIZED protein MJECL43|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKPWSRKKK 10
K+PWS ++K
Sbjct: 164 KRPWSNEQK 172


>sp|RFCL_METMJ|REPLICATION factor C large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 KPWSRKKK 10
+ WSR+KK
Sbjct: 30 RDWSRQKK 37




72|Sequence|356|365|SRKKKILWQL

>sp|GGR2_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanococcoides burtonii (strain DSM 6242

Query: 4 KKILWQL 10
KK+LW L
Sbjct: 382 KKLLWDL 388


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 4 KKILWQL 10
KK+LW L
Sbjct: 382 KKLLWNL 388


>sp|GGR_METMA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KKILWQL 10
KK+LW L
Sbjct: 385 KKLLWDL 391


>sp|GGR_METAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KKILWQL 10
KK+LW L
Sbjct: 385 KKLLWDL 391


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KKILWQL 10
KK+LW L
Sbjct: 385 KKLLWDL 391


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SRKKKILW 8
++ KKI+W
Sbjct: 189 NKNKKIIW 196


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KKKILWQL 10
+KKI W+L
Sbjct: 391 EKKICWRL 398




73|Sequence|361|370|ILWQLGTLVG

>sp|RL30E_SACS2|LARGE ribosomal subunit protein eL30|Saccharolobus solfataricus (strain

Query: 3 WQLGTLVG 10
W LGTL G
Sbjct: 76 WDLGTLCG 83


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 3 WQLGTLVG 10
W++GTL G
Sbjct: 753 WKIGTLNG 760


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WQLGTLVG 10
W++GTL G
Sbjct: 1109 WKIGTLNG 1116


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILWQLGTL 8
I WQLG L
Sbjct: 159 IHWQLGKL 166


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 WQLGTL 8
WQ+GT+
Sbjct: 276 WQMGTI 281


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LWQLGTLVG 10
LW L LVG
Sbjct: 25 LWHLSHLVG 33


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ILWQLGTLV 9
I+W LGT +
Sbjct: 320 IVWYLGTYI 328


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 WQLGTLVG 10
W++GTL G
Sbjct: 747 WKVGTLNG 754


>sp|Y1786_ARCFU|UNCHARACTERIZED protein AF_1786|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LWQLGTLVG 10
+W+ GTL G
Sbjct: 78 VWKAGTLSG 86


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 QLGTLVG 10
+LGTLVG
Sbjct: 107 KLGTLVG 113


>sp|Y1420_ARCFU|UNCHARACTERIZED protein AF_1420|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ILWQLGTLVG 10
++++LG LVG
Sbjct: 30 VIFRLGRLVG 39




74|Sequence|366|375|GTLVGAPVGI

>sp|THTR_HALVD|PUTATIVE thiosulfate sulfurtransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 GTLVGAPV 8
G LVGAPV
Sbjct: 275 GNLVGAPV 282


>sp|FOLD_PYRNV|BIFUNCTIONAL protein FolD|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GTLVGAPVGI 10
GTLVG P+ I
Sbjct: 176 GTLVGFPLSI 185


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GTLVGAPVGI 10
GTLVG P+ I
Sbjct: 176 GTLVGFPLSI 185


>sp|RAD25_HALSA|PUTATIVE DNA 3'-5' helicase Rad25|Halobacterium salinarum (strain ATCC

Query: 2 TLVGAPVG 9
TLVG P+G
Sbjct: 396 TLVGRPIG 403


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 2 TLVGAPVG 9
TL+G P+G
Sbjct: 411 TLIGPPIG 418


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTLVGAPVGI 10
G+L+G P+G+
Sbjct: 85 GSLIGEPLGL 94


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTLVGAPVGI 10
G+L+G P+G+
Sbjct: 83 GSLIGEPLGL 92


>sp|TRPE_THEKO|ANTHRANILATE synthase component 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTLVGAP 7
GTL GAP
Sbjct: 343 GTLTGAP 349


>sp|Y829_ARCFU|UNCHARACTERIZED protein AF_0829|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VGAPVGI 10
+GAP+GI
Sbjct: 59 IGAPLGI 65


>sp|TRPE_METJA|ANTHRANILATE synthase component 1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GTLVGAP 7
GTL GAP
Sbjct: 383 GTLSGAP 389


>sp|HAS8_HALS8|HALOCIN-S8 S8a

Query: 2 TLVGAPV 8
TLVG PV
Sbjct: 259 TLVGGPV 265


>sp|GATA_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 GTLVGAPVGI 10
G + G PVG+
Sbjct: 399 GNISGVPVGL 408


>sp|GATA_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 GTLVGAPVGI 10
G + G PVG+
Sbjct: 399 GNISGVPVGL 408


>sp|GATA_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain DSM

Query: 1 GTLVGAPVGI 10
G + G PVG+
Sbjct: 399 GNISGVPVGL 408


>sp|GATA_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 GTLVGAPVGI 10
G + G PVG+
Sbjct: 399 GNIQGVPVGL 408


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTLVGAP 7
GTL GAP
Sbjct: 424 GTLSGAP 430


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTLVGAP 7
GT+ GAP
Sbjct: 387 GTITGAP 393


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 GTLVGAPVGI 10
GT G P GI
Sbjct: 431 GTFAGLPPGI 440


>sp|TRPE_HALVD|ANTHRANILATE synthase component 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GTLVGAP 7
GTL GAP
Sbjct: 422 GTLTGAP 428


>sp|RL5_SULAC|LARGE ribosomal subunit protein uL5|Sulfolobus acidocaldarius (strain

Query: 1 GTLVGAPVGI 10
G GAP+G+
Sbjct: 61 GVRKGAPIGV 70


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 GTLVGAP 7
GT+ GAP
Sbjct: 394 GTITGAP 400




75|Sequence|371|380|APVGIALIAG

>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 APVGIALIAG 10
AP+G+ LI+G
Sbjct: 233 APIGVCLISG 242


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 1 APVGIALIAG 10
AP G+ L+AG
Sbjct: 148 APKGVGLVAG 157


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 1 APVGIALIAG 10
AP G+ L+AG
Sbjct: 164 APKGVGLVAG 173


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 1 APVGIALIAG 10
AP G+ L+AG
Sbjct: 148 APKGVGLVAG 157


>sp|MALG_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 2 PVGIALIAG 10
PVGIAL G
Sbjct: 226 PVGIALFQG 234


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 1 APVGIALIAG 10
AP G+ L+AG
Sbjct: 147 APKGVGLVAG 156


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 1 APVGIALIAG 10
AP G+ L+AG
Sbjct: 148 APKGVGLVAG 157


>sp|PSA_METS5|PROTEASOME subunit alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 PVGIALIAG 10
P G+ALI G
Sbjct: 133 PFGVALIVG 141


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VGIALIAG 10
VG+ALI G
Sbjct: 268 VGVALIGG 275


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PVGIALIAG 10
P G+ALI G
Sbjct: 133 PFGVALIVG 141


>sp|Y2105_SACS2|UNCHARACTERIZED protein SSO2105|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PVGIALIAG 10
P G LIAG
Sbjct: 207 PTGYGLIAG 215


>sp|PSA_NATPD|PROTEASOME subunit alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PVGIALIAG 10
P G+ALI G
Sbjct: 133 PFGVALIIG 141


>sp|PSA1_HALMA|PROTEASOME subunit alpha 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 PVGIALIAG 10
P G+ALI G
Sbjct: 133 PFGVALIIG 141


>sp|PSA_SULTO|PROTEASOME subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PVGIALIAG 10
P G+ALI G
Sbjct: 133 PFGVALIIG 141


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 1 APVGIALIAG 10
AP G L+AG
Sbjct: 152 APKGTGLVAG 161


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 1 APVGIALIAG 10
AP G L+AG
Sbjct: 153 APKGTGLVAG 162


>sp|PSA1_HALVD|PROTEASOME subunit alpha 1|Haloferax volcanii (strain ATCC 29605

Query: 2 PVGIALIAG 10
P G+AL+ G
Sbjct: 133 PFGVALLIG 141


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 APVGIALIAG 10
A +G+A++AG
Sbjct: 435 ASMGVAMLAG 444


>sp|PSA_HALWD|PROTEASOME subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PVGIALIAG 10
P G+AL+ G
Sbjct: 133 PFGVALLIG 141




76|Sequence|376|385|ALIAGIAIPA

>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LIAGIAIPA 10
+IAGIA+P
Sbjct: 66 IIAGIAVPG 74




77|Sequence|381|390|IAIPAMIIGI

>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IAIPAMIIG 9
I +PAM+IG
Sbjct: 301 IILPAMLIG 309


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 PAMIIGI 10
PAMI+G+
Sbjct: 718 PAMILGV 724


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 3 IPAMIIG 9
+PAMIIG
Sbjct: 87 VPAMIIG 93


>sp|MTD_METTH|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 3 IPAMIIG 9
+PAMIIG
Sbjct: 87 VPAMIIG 93


>sp|MNTP_METHJ|MANGANESE exporter MntP|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 IPAMIIGI 10
IPA+IIG+
Sbjct: 134 IPALIIGL 141


>sp|MNTP_METMJ|MANGANESE exporter MntP|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IAIPAMIIGI 10
IA+PA+ IG+
Sbjct: 130 IALPAITIGV 139


>sp|RIBB_ARCFU|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IAIPAMIIG 9
IAIPA+ +G
Sbjct: 32 IAIPAIHVG 40


>sp|RS3_HYPBU|SMALL ribosomal subunit protein uS3|Hyperthermus butylicus (strain DSM

Query: 4 PAMIIG 9
PAMIIG
Sbjct: 52 PAMIIG 57




78|Sequence|386|395|MIIGIPVYVG

>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MIIGIPVYVG 10
+IIG PVY G
Sbjct: 78 VIIGTPVYQG 87


>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GIPVYVG 10
GIP+YVG
Sbjct: 86 GIPIYVG 92


>sp|IDI2_PYRIL|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GIPVYVG 10
GIP+YVG
Sbjct: 86 GIPIYVG 92


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 GIPVYVG 10
GIP+YVG
Sbjct: 86 GIPIYVG 92


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 1|Methanocaldococcus

Query: 3 IGIPVYVG 10
+GIP+YV
Sbjct: 342 VGIPIYVA 349


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 1 MIIGIPVYVG 10
+I+G P+Y+G
Sbjct: 830 VIVGKPIYLG 839


>sp|DPHB_METLZ|DIPHTHINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GIPVYVG 10
GIP+YVG
Sbjct: 194 GIPLYVG 200


>sp|HEM1_PICTO|GLUTAMYL-TRNA reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 MIIGIPVY 8
MII IP+Y
Sbjct: 1 MIIMIPIY 8


>sp|IDI2_PYRAR|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GIPVYVG 10
GIP+YVG
Sbjct: 86 GIPMYVG 92


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MIIGIPVYV 9
M+ G+PVYV
Sbjct: 136 MLGGVPVYV 144


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 3 IGIPVYV 9
+GIPVYV
Sbjct: 29 MGIPVYV 35


>sp|PURP_PYRAB|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 IIGIPVY 8
+IG+PVY
Sbjct: 179 VIGVPVY 185


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MIIGIPVYVG 10
++IG P Y G
Sbjct: 76 IVIGTPTYFG 85


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 GIPVYVG 10
G+P++VG
Sbjct: 976 GVPIFVG 982


>sp|RL14_IGNH4|LARGE ribosomal subunit protein uL14|Ignicoccus hospitalis (strain

Query: 1 MIIGIPVYVG 10
MIIG+P Y G
Sbjct: 35 MIIGVPGYHG 44


>sp|GLFT_THEAC|GLUTAMATE formimidoyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IGIPVYV 9
+GIPVY+
Sbjct: 118 LGIPVYL 124


>sp|ISF2_METJA|IRON-SULFUR flavoprotein MJ1083|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MIIGIPVYVG 10
+I+G PVY G
Sbjct: 78 IILGSPVYFG 87


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 4 GIPVYV 9
G+PVYV
Sbjct: 407 GVPVYV 412


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 3 IGIPVYV 9
+G+PVY+
Sbjct: 250 LGLPVYI 256


>sp|SRP54_STAMF|SIGNAL recognition particle 54 kDa|Staphylothermus marinus (strain ATCC

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 151 IGVPVY 156


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 238 LGIPVY 243


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MIIGIPVY 8
M++GIP+Y
Sbjct: 157 MLLGIPIY 164


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 4 GIPVYVG 10
G+P++VG
Sbjct: 816 GVPIFVG 822


>sp|PURP_THEKO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Thermococcus kodakarensis (strain ATCC

Query: 2 IIGIPVY 8
++G+PVY
Sbjct: 173 VVGVPVY 179


>sp|SRP54_SACI1|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 150 IGVPVY 155


>sp|SRP54_SACI6|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain M.16.4

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 150 IGVPVY 155


>sp|SRP54_SACI4|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 150 IGVPVY 155


>sp|SRP54_SACI3|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 150 IGVPVY 155


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 4 GIPVYV 9
G+P+YV
Sbjct: 243 GVPIYV 248


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 3 IGIPVYVG 10
+ IP YVG
Sbjct: 191 VAIPFYVG 198


>sp|SRP54_SACI7|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 150 IGVPVY 155


>sp|SRP54_SACI2|SIGNAL recognition particle 54 kDa|Saccharolobus islandicus (strain

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 150 IGVPVY 155


>sp|SRP54_ACIAM|SIGNAL recognition particle 54 kDa|Acidianus ambivalens (Desulfurolobus

Query: 3 IGIPVY 8
IG+PVY
Sbjct: 152 IGVPVY 157


>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 1 MIIGIPVYV 9
M++ IPVY+
Sbjct: 113 MLLNIPVYL 121


>sp|UPPP_SACI7|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain Y.G.57.14 /

Query: 2 IIGIPVYV 9
I+G+P+YV
Sbjct: 87 IVGVPLYV 94


>sp|UPPP_SACI1|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain Y.N.15.51 /

Query: 2 IIGIPVYV 9
I+G+P+YV
Sbjct: 87 IVGVPLYV 94


>sp|PURP_PYRFU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IIGIPVY 8
++G+PVY
Sbjct: 176 VLGVPVY 182


>sp|G3P_HYPBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Hyperthermus butylicus (strain DSM 5456

Query: 4 GIPVYV 9
GIPVYV
Sbjct: 49 GIPVYV 54


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 241 LGIPVY 246


>sp|Y2164_ARCFU|UNCHARACTERIZED protein AF_2164|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 MIIGIPVYVG 10
+ +GIP Y+G
Sbjct: 70 LFVGIPAYLG 79


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IIGIPVYVG 10
IIG+PV G
Sbjct: 514 IIGVPVVGG 522


>sp|PURP_PYRHO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Pyrococcus horikoshii (strain ATCC

Query: 2 IIGIPVY 8
++G+P+Y
Sbjct: 175 VVGVPIY 181


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 47 LGIPVY 52


>sp|G3P_PYRHO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 47 LGIPVY 52


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 47 LGIPVY 52


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 1 MIIGIPVYV 9
+I G+P+Y+
Sbjct: 232 IIAGVPIYI 240


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 47 LGIPVY 52


>sp|G3P_PYRAB|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 47 LGIPVY 52


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 3 IGIPVY 8
+GIPVY
Sbjct: 47 LGIPVY 52


>sp|GLNA_PYRHO|GLUTAMINE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IGIPVYVG 10
+GI VY+G
Sbjct: 117 LGIKVYIG 124


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 2 IIGIPVYV 9
+IG+PV+V
Sbjct: 283 VIGLPVFV 290




79|Sequence|391|400|PVYVGRKIHN

>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 1 PVYVGRK 7
P YVGRK
Sbjct: 240 PFYVGRK 246


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 1 PVYVGRKIH 9
P+ VG++IH
Sbjct: 412 PIIVGKEIH 420


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVYVGRKIHN 10
P++VG K HN
Sbjct: 155 PLWVGTKPHN 164


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PVYVGRKIHN 10
P+Y+ R HN
Sbjct: 122 PLYLARYFHN 131


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PVYVGRKI 8
P Y+GR+I
Sbjct: 538 PAYLGRRI 545


>sp|PYRI_ARCFU|ASPARTATE carbamoyltransferase regulatory chain|Archaeoglobus fulgidus

Query: 3 YVGRKIHN 10
Y GRKI N
Sbjct: 140 YCGRKIEN 147


>sp|HCGF_METKA|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanopyrus kandleri (strain

Query: 3 YVGRKIH 9
+VGR+IH
Sbjct: 14 FVGREIH 20


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PVYVGRKI 8
P Y+GR++
Sbjct: 526 PAYLGRRV 533


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YVGRKIHN 10
YV RK+ N
Sbjct: 45 YVARKVRN 52


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VGRKIH 9
VGRKIH
Sbjct: 166 VGRKIH 171


>sp|PYRF_METBU|OROTIDINE 5'-phosphate decarboxylase|Methanococcoides burtonii (strain DSM

Query: 2 VYVGRKIHN 10
V VGR I+N
Sbjct: 190 VIVGRSIYN 198


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 PVYVGRKIHN 10
P+Y G+KI +
Sbjct: 1005 PLYSGKKIFS 1014




80|Sequence|396|405|RKIHNRYEGK

>sp|AATB_STAMF|A-TYPE ATP synthase subunit B|Staphylothermus marinus (strain ATCC 43588

Query: 1 RKIHNRYEGK 10
RK H +Y GK
Sbjct: 457 RKYHPKYRGK 466


>sp|TSR3_HALSA|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 2 KIHNRYEG 9
++H RYEG
Sbjct: 2 ELHVRYEG 9


>sp|TSR3_HALS3|16S rRNA aminocarboxypropyltransferase|Halobacterium salinarum

Query: 2 KIHNRYEG 9
++H RYEG
Sbjct: 2 ELHVRYEG 9


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 IHNRYEGK 10
IHNR+E K
Sbjct: 231 IHNRFELK 238


>sp|HDLB_ARCPA|HETERODISULFIDE reductase subunit B-like protein|Archaeoglobus profundus (strain

Query: 3 IHNRYEGK 10
I RYEGK
Sbjct: 110 IGKRYEGK 117


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RKIHNRYEG 9
R+IH +EG
Sbjct: 114 RRIHEEFEG 122


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 1 RKIHNRYEGK 10
+KIH R +G+
Sbjct: 202 KKIHRRDDGE 211


>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 3 IHNRYEGK 10
+ NRY GK
Sbjct: 205 LRNRYPGK 212


>sp|Y574_METTH|UNCHARACTERIZED protein MTH_574|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KIHNRYE 8
K+HN YE
Sbjct: 121 KLHNIYE 127


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 RKIHNRY 7
RK+H RY
Sbjct: 370 RKLHERY 376


>sp|RL21_SACI7|LARGE ribosomal subunit protein eL21|Saccharolobus islandicus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_SACI6|LARGE ribosomal subunit protein eL21|Saccharolobus islandicus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_SACI4|LARGE ribosomal subunit protein eL21|Saccharolobus islandicus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_SACI3|LARGE ribosomal subunit protein eL21|Saccharolobus islandicus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_SACI2|LARGE ribosomal subunit protein eL21|Saccharolobus islandicus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_SACI1|LARGE ribosomal subunit protein eL21|Saccharolobus islandicus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 1 RKIHNRYEGK 10
++I NR EGK
Sbjct: 39 KEITNREEGK 48


>sp|RL21_SACS2|LARGE ribosomal subunit protein eL21|Saccharolobus solfataricus (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_METS5|LARGE ribosomal subunit protein eL21|Metallosphaera sedula (strain ATCC

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 56 HRRYQGK 62


>sp|RL21_KORCO|LARGE ribosomal subunit protein eL21|Korarchaeum cryptofilum (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 55 HRRYQGK 61


>sp|RL21_PYRAE|LARGE ribosomal subunit protein eL21|Pyrobaculum aerophilum (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 55 HRRYQGK 61


>sp|RL21_PYRAR|LARGE ribosomal subunit protein eL21|Pyrobaculum arsenaticum (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 55 HRRYQGK 61


>sp|RL21_PYRNV|LARGE ribosomal subunit protein eL21|Pyrobaculum neutrophilum (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 55 HRRYQGK 61


>sp|MPTB_METJA|DIHYDRONEOPTERIN 2',3'-cyclic phosphate phosphodiesterase|Methanocaldococcus

Query: 4 HNRYEG 9
H+RYEG
Sbjct: 51 HHRYEG 56


>sp|RL21_PYRCJ|LARGE ribosomal subunit protein eL21|Pyrobaculum calidifontis (strain

Query: 4 HNRYEGK 10
H RY+GK
Sbjct: 55 HRRYQGK 61




81|Sequence|401|410|RYEGKDVSKH

>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RYEGKDVSKH 10
RY+G+D+SK+
Sbjct: 964 RYKGEDISKY 973


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RYEGKDVSKH 10
RY+G+D+S++
Sbjct: 495 RYKGEDISRY 504


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 RYEGKDVSKH 10
RY+G+D+S++
Sbjct: 833 RYKGEDISRY 842


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 3 EGKDVSKH 10
EGKD++KH
Sbjct: 60 EGKDLTKH 67


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 1 RYEGKDVSK 9
+Y GKDVS+
Sbjct: 486 QYSGKDVSE 494


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 1 RYEGKDVSKH 10
RY G D++ H
Sbjct: 415 RYPGTDITIH 424


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 4 GKDVSKH 10
GKD+ KH
Sbjct: 50 GKDIEKH 56


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 RYEGKDVSK 9
R++G++VSK
Sbjct: 248 RFDGREVSK 256


>sp|MPTN_METAC|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 YEGKDVSK 9
Y+GKD+++
Sbjct: 153 YKGKDIAR 160


>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 1 RYEGKDV 7
RY GKDV
Sbjct: 208 RYPGKDV 214


>sp|GLFT_PICTO|GLUTAMATE formimidoyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 EGKDVSK 9
EG+D+SK
Sbjct: 17 EGRDISK 23


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RYEGKDVSK 9
+YEG+ VSK
Sbjct: 404 KYEGQAVSK 412


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YEGKDVSKH 10
Y GKD++ H
Sbjct: 331 YTGKDIAYH 339


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YEGKDVSKH 10
Y GKD++ H
Sbjct: 340 YTGKDIAYH 348


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YEGKDVSKH 10
Y GKD++ H
Sbjct: 331 YTGKDIAYH 339


>sp|SYR_PYRFU|ARGININE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YEGKDVSKH 10
Y GKD++ H
Sbjct: 331 YTGKDIAYH 339


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 2 YEGKDVSKH 10
Y+G+DV H
Sbjct: 247 YKGRDVPNH 255


>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YEGKDVSK 9
Y+GKD+++
Sbjct: 153 YKGKDIAR 160


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 YEGKDVSKH 10
Y GKD++ H
Sbjct: 342 YTGKDIAYH 350


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YEGKDV 7
YEGKD+
Sbjct: 90 YEGKDI 95


>sp|COFC_META3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 RYEGKDVSKH 10
RYEG KH
Sbjct: 145 RYEGFSFLKH 154


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RYEGKDVSKH 10
RY+G +KH
Sbjct: 145 RYKGLSFAKH 154


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 481 FEGKSPNKH 489


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 479 FEGKSPNKH 487


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 481 FEGKSPNKH 489


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 481 FEGKSPNKH 489


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 WEGKSPNKH 491


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 FEGKSPNKH 491


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 482 FEGKSPNKH 490


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 2 YEGKDVSK 9
YEGK++++
Sbjct: 6 YEGKEIAR 13


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 WEGKSPNKH 491


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 FEGKSPNKH 491


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 WEGKSPNKH 491


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 WEGKSPNKH 491


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YEGKDVSKH 10
+EGK +KH
Sbjct: 483 WEGKSPNKH 491




82|Sequence|406|415|DVSKHKRNLA

>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHKR L+
Sbjct: 233 DVAKHKRALS 242


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHKR L+
Sbjct: 233 DVAKHKRALS 242


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHKR L+
Sbjct: 233 DVAKHKRALS 242


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHKR L+
Sbjct: 233 DVAKHKRALS 242


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHKR L+
Sbjct: 233 DVAKHKRALS 242


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHKR L+
Sbjct: 233 DVAKHKRALS 242


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 DVSKHKRNLA 10
DV+KHK+ L+
Sbjct: 233 DVAKHKKALS 242


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VSKHKRNL 9
+S HKRNL
Sbjct: 228 LSDHKRNL 235


>sp|SYS_METAC|SERINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DVSKHKRNL 9
D KHKRN+
Sbjct: 46 DSLKHKRNV 54


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 DVSKHKRN 8
D SKHK N
Sbjct: 976 DFSKHKNN 983


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 1 DVSKHKRNL 9
DV++H+R L
Sbjct: 423 DVAEHQREL 431


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 1 DVSKHKRNL 9
DVSK ++NL
Sbjct: 117 DVSKDRKNL 125


>sp|SYS_METMA|SERINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVSKHKRNL 9
D KHKRN+
Sbjct: 46 DDLKHKRNV 54


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVSKHKRNL 9
D KHKRN+
Sbjct: 46 DELKHKRNV 54


>sp|SYT_THEGJ|THREONINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VSKHKRNLA 10
VSK +RN+A
Sbjct: 145 VSKEERNIA 153


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VSKHKRNLA 10
VSK +RN+A
Sbjct: 145 VSKEERNIA 153


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DVSKHKRNL 9
D SKHK N+
Sbjct: 368 DPSKHKNNI 376




83|Sequence|411|420|KRNLAIAGGV

>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RNLAIAGGV 10
RN+A+AGGV
Sbjct: 458 RNVAVAGGV 466


>sp|COFH_METKA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 NLAIAGGV 10
N+A+AGG+
Sbjct: 15 NMAVAGGI 22


>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LAIAGGV 10
LAIAGGV
Sbjct: 316 LAIAGGV 322


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 2 RNLAIAGGV 10
RN+A+ GGV
Sbjct: 456 RNVAVVGGV 464


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KRNLAIAGGV 10
+RN+ IAG V
Sbjct: 296 ERNITIAGSV 305


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KRNLAIAGGV 10
KRNL GG+
Sbjct: 355 KRNLEFTGGL 364


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RNLAIAGGV 10
RN+A+ GGV
Sbjct: 456 RNVAVVGGV 464


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC

Query: 3 NLAIAGGV 10
NLA+ GG+
Sbjct: 42 NLAVVGGI 49


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 4 LAIAGGV 10
LA+AGG+
Sbjct: 95 LAVAGGI 101


>sp|UPPP_PYRIL|UNDECAPRENYL-DIPHOSPHATASE islandicum (strain DSM 4184

Query: 3 NLAIAGGV 10
LAIAGG+
Sbjct: 254 TLAIAGGI 261


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 3 NLAIAGG 9
NLAI GG
Sbjct: 147 NLAITGG 153




84|Sequence|416|425|IAGGVTLSVI

>sp|CBP1_PYRFU|THERMOSTABLE carboxypeptidase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IAGGVTLSV 9
IAGGV+L +
Sbjct: 289 IAGGVSLGI 297


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 AGGVTLSV 9
AGGVT+SV
Sbjct: 35 AGGVTISV 42


>sp|NOP10_METAC|RIBOSOME biogenesis protein Nop10|Methanosarcina acetivorans (strain ATCC

Query: 1 IAGGVTLSVI 10
+ GGVTL I
Sbjct: 22 VCGGVTLPAI 31




85|Sequence|421|430|TLSVIVSPVV

>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LSVIVSPVV 10
LS IVSP V
Sbjct: 309 LSAIVSPTV 317


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 TLSVIVSPVV 10
TLS+ ++PV+
Sbjct: 497 TLSITLAPVI 506


>sp|Y343_METJA|UNCHARACTERIZED protein MJ0343|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSVIVSPV 9
LSV+V PV
Sbjct: 553 LSVVVEPV 560




86|Sequence|426|435|VSPVVAAVTV

***** No hits found ******


87|Sequence|431|440|AAVTVGIGVP

>sp|Y1402_METJA|UNCHARACTERIZED protein MJ1402|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AAVTVGIGVP 10
AA +G+GVP
Sbjct: 60 AAGAIGVGVP 69


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 1 AAVTVGIGVP 10
A +GIGVP
Sbjct: 200 AEYVMGIGVP 209


>sp|Y440_METJA|UNCHARACTERIZED protein MJ0440|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AAVTVGIGV 9
+A T+GIGV
Sbjct: 218 SATTIGIGV 226


>sp|Y344_METJA|UNCHARACTERIZED protein MJ0344|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TVGIGVP 10
T+GIG+P
Sbjct: 49 TIGIGIP 55


>sp|FLAX_SULAC|ARCHAEAL flagellar motor scaffold protein|Sulfolobus acidocaldarius

Query: 3 VTVGIGVP 10
+ +G+G+P
Sbjct: 14 ILIGVGIP 21


>sp|MTAD_HALMA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AAVTVGIG 8
A VTVGIG
Sbjct: 290 AGVTVGIG 297


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 AAVTVGIGVP 10
AA+ VG+G P
Sbjct: 102 AALVVGLGSP 111




88|Sequence|436|445|GIGVPIMLAY

>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GIGVPIM 7
GIGVP+M
Sbjct: 312 GIGVPVM 318


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GIGVPIM 7
GIGVP+M
Sbjct: 312 GIGVPVM 318


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 GIGVPIM 7
GIGVP+M
Sbjct: 335 GIGVPVM 341


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GIGVPIM 7
G+GVP+M
Sbjct: 312 GVGVPVM 318


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 1|Methanocaldococcus

Query: 1 GIGVPIMLA 9
G+G+PI +A
Sbjct: 341 GVGIPIYVA 349


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GIGVPIM 7
G+G+P+M
Sbjct: 312 GVGIPVM 318


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GIGVPIM 7
GIGVPI+
Sbjct: 298 GIGVPIL 304


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 IGVPIMLAY 10
+G PI LAY
Sbjct: 322 LGAPIALAY 330


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 1 GIGVPIML 8
GIGVP+ L
Sbjct: 473 GIGVPMCL 480


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 4 VPIMLAY 10
VP+M+AY
Sbjct: 143 VPLMVAY 149


>sp|MDH_HALSA|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GIGVPIMLA 9
G+GVP+ L
Sbjct: 261 GLGVPVKLG 269


>sp|MDH_HALS3|MALATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GIGVPIMLA 9
G+GVP+ L
Sbjct: 261 GLGVPVKLG 269


>sp|AATD_METVS|A-TYPE ATP synthase subunit D|Methanococcus vannielii (strain ATCC 35089

Query: 1 GIGVPI 6
GIGVP+
Sbjct: 99 GIGVPV 104


>sp|TRM1_THEON|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus onnurineus

Query: 2 IGVPIMLAY 10
+GV ++LAY
Sbjct: 213 LGVEVLLAY 221


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 2 IGVPIMLAY 10
+GV ++LAY
Sbjct: 214 LGVEVLLAY 222


>sp|PGP_PYRFU|PHOSPHOGLYCOLATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GIGVPIML 8
+GVPIML
Sbjct: 34 SLGVPIML 41


>sp|PGP_PYRHO|PHOSPHOGLYCOLATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IGVPIML 8
+G+PIML
Sbjct: 35 LGIPIML 41


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 2 IGVPIMLAY 10
+GV ++LAY
Sbjct: 213 LGVEVLLAY 221


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 1 GIGVPI 6
GIG+PI
Sbjct: 266 GIGIPI 271


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 GIGVPIML 8
G+G+PI+L
Sbjct: 693 GLGLPIIL 700


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 GIGVPI 6
GIGVP+
Sbjct: 104 GIGVPV 109


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera

Query: 1 GIGVPIML 8
G+G+P+++
Sbjct: 66 GLGIPVII 73


>sp|MTRF_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit F|Methanosarcina barkeri (strain

Query: 3 GVPIMLA 9
GVP+MLA
Sbjct: 10 GVPMMLA 16


>sp|PGP_THEKO|PHOSPHOGLYCOLATE phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IGVPIML 8
+GVP+ML
Sbjct: 35 LGVPVML 41




89|Sequence|441|450|IMLAYVYGVV

>sp|G1PDH_SULAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IMLAYVYGV 9
IM+AY++G+
Sbjct: 276 IMMAYIHGI 284


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LAYVYGVV 10
+ YVYG++
Sbjct: 1001 MNYVYGII 1008


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 1 IMLAYVYG 8
IM+AY++G
Sbjct: 278 IMMAYLHG 285


>sp|CAS8_THETK|CRISPR system associated protein Cas8|Thermoproteus tenax (strain ATCC

Query: 3 LAYVYGVV 10
L Y+YG V
Sbjct: 185 LGYIYGTV 192


>sp|G1PDH_SULTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IMLAYVYGV 9
I++AY++G+
Sbjct: 275 ILMAYIHGI 283


>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 MLAYVYGVV 10
MLA+++G+
Sbjct: 165 MLAFIWGIT 173


>sp|IF6_THEKO|TRANSLATION initiation factor 6|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 MLAYVYGVV 10
MLA YGVV
Sbjct: 200 MLANSYGVV 208


>sp|IF6_PYRFU|TRANSLATION initiation factor 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 MLAYVYGVV 10
MLA YGVV
Sbjct: 199 MLANSYGVV 207


>sp|G1PDH_METS5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Metallosphaera sedula (strain ATCC 51363

Query: 1 IMLAYVYGV 9
I++AY++G+
Sbjct: 276 IIMAYIHGI 284


>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IMLAYVYGV 9
I++AY++G+
Sbjct: 265 IIMAYLHGI 273




90|Sequence|446|455|VYGVVPISLC

>sp|COFC_METS3|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 VYGVVPIS 8
+YG++P+S
Sbjct: 4 IYGIIPVS 11


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YGVVPISL 9
YG++PI+L
Sbjct: 425 YGLIPINL 432


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YGVVPI 7
YGVVPI
Sbjct: 141 YGVVPI 146


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 YGVVPI 7
YGVVPI
Sbjct: 141 YGVVPI 146


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GVVPISLC 10
G VPIS+C
Sbjct: 64 GEVPISIC 71


>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 YGVVPI 7
YGV+PI
Sbjct: 134 YGVIPI 139


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 YGVVPISLC 10
YG +PI C
Sbjct: 154 YGYIPIKEC 162


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 3 GVVPISLC 10
GVVP LC
Sbjct: 97 GVVPKDLC 104


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 VYGVVP 6
+YGVVP
Sbjct: 157 IYGVVP 162


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 VYGVVP 6
+YGVVP
Sbjct: 157 IYGVVP 162


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 2 YGVVPIS 8
YGV+P++
Sbjct: 249 YGVIPVN 255


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VYGVVPISL 9
++G+VP+S+
Sbjct: 429 LFGLVPLSI 437


>sp|ATGT_METVS|TRNA-GUANINE(15) transglycosylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VYGVVPISL 9
V+G+VP+++
Sbjct: 429 VFGLVPLNI 437


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VYGVVPISL 9
V+G+VP+++
Sbjct: 429 VFGLVPLNI 437


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 VYGVVPISL 9
V+G+VP+++
Sbjct: 429 VFGLVPLNI 437


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 VYGVVPISL 9
V+G+VP+++
Sbjct: 429 VFGLVPLNI 437


>sp|ATGT_METM5|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C5 /

Query: 1 VYGVVPISL 9
V+G+VP+++
Sbjct: 429 VFGLVPLNI 437


>sp|CAS5C_SACS2|CRISPR-ASSOCIATED protein Cas5 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VYGVVP 6
+YGV+P
Sbjct: 103 IYGVIP 108




91|Sequence|451|460|PISLCRSGGC

>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 2 ISLCRSGGC 10
IS+C GGC
Sbjct: 3 ISICGKGGC 11


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISLCRS 7
P+SLCR+
Sbjct: 84 PLSLCRA 90


>sp|Y1451_METJA|UNCHARACTERIZED protein MJ1451|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISLCRSGGC 10
PI R GGC
Sbjct: 458 PIGGVRGGGC 467


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 PISLCRSGGC 10
P CR GC
Sbjct: 205 PCPRCRGAGC 214


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 2 ISLCRSGG 9
+SL RSGG
Sbjct: 125 VSLTRSGG 132


>sp|FER_HALSA|FERREDOXIN salinarum (strain ATCC 700922

Query: 1 PISLCRSGGC 10
P S CR+G C
Sbjct: 61 PFS-CRAGAC 69


>sp|FER1_HALMA|FERREDOXIN-1 marismortui (strain ATCC 43049

Query: 1 PISLCRSGGC 10
P S CR+G C
Sbjct: 61 PFS-CRAGAC 69


>sp|HEM1_ARCFU|GLUTAMYL-TRNA reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SLCRSGG 9
+LCR GG
Sbjct: 114 NLCREGG 120


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 1 PISLCRSGGC 10
P CR GC
Sbjct: 226 PCRKCRGKGC 235


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISLCRSGG 9
I+ CR+GG
Sbjct: 788 IARCRNGG 795


>sp|SUHB_AERPE|INOSITOL-1-MONOPHOSPHATASE pernix (strain ATCC 700893

Query: 1 PISLCRSGGC 10
P+S R GC
Sbjct: 126 PVSFARGKGC 135


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PISLCRSGGC 10
P+ LC GC
Sbjct: 242 PLMLCVGVGC 251




92|Sequence|456|465|RSGGCGVSAG

>sp|HIS6_METVS|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus vannielii (strain

Query: 2 SGGCGVSA 9
SGGCG SA
Sbjct: 222 SGGCGSSA 229


>sp|COFE_METM6|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C6 /

Query: 1 RSGGCGVSAG 10
R G CGV+ G
Sbjct: 162 RKGSCGVAIG 171


>sp|COFE_METM7|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain C7 /

Query: 1 RSGGCGVSAG 10
R G CGV+ G
Sbjct: 162 RKGSCGVAIG 171


>sp|Y1621_ARCFU|UPF0324 membrane protein AF_1621|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGGCGVSA 9
SG CGVSA
Sbjct: 137 SGICGVSA 144


>sp|COFE_METMP|COENZYME F420:L-glutamate ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 RSGGCGVSAG 10
R G CG++ G
Sbjct: 162 RKGSCGIAIG 171


>sp|Y520_METJA|PUTATIVE NADH-ubiquinone oxidoreductase MJ0520|Methanocaldococcus jannaschii

Query: 4 GCGVSAG 10
GCG+S+G
Sbjct: 111 GCGLSSG 117


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 RSGGCGVSAG 10
R G CGV+ G
Sbjct: 617 RVGACGVAWG 626


>sp|HIS6_METM7|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 SGGCGVS 8
SGGCG S
Sbjct: 222 SGGCGNS 228


>sp|HIS6_METM5|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 SGGCGVS 8
SGGCG S
Sbjct: 222 SGGCGNS 228


>sp|HIS6_META3|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus aeolicus (strain

Query: 2 SGGCG 6
SGGCG
Sbjct: 225 SGGCG 229


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 RSGGC 5
RSGGC
Sbjct: 68 RSGGC 72


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 1 RSGGC 5
RSGGC
Sbjct: 68 RSGGC 72


>sp|HIS6_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 SGGCG 6
SGGCG
Sbjct: 222 SGGCG 226


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 RSGGCGVSAG 10
R G CGV+ G
Sbjct: 611 RVGACGVAWG 620


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 SGGCG 6
SGGCG
Sbjct: 221 SGGCG 225


>sp|HIS6_NITMS|IMIDAZOLE glycerol phosphate synthase subunit|Nitrosopumilus maritimus

Query: 2 SGGCG 6
SGGCG
Sbjct: 216 SGGCG 220


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 SGGCG 6
SGGCG
Sbjct: 222 SGGCG 226


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 CGVSAG 10
CGV+AG
Sbjct: 871 CGVNAG 876


>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GCGVSAG 10
GCGV+ G
Sbjct: 219 GCGVAMG 225


>sp|Y084_METJA|UNCHARACTERIZED ATP-binding protein MJ0084|Methanocaldococcus jannaschii (strain

Query: 3 GGCGVSA 9
GGCG S+
Sbjct: 9 GGCGKSS 15


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GCGVSAG 10
GCGV+ G
Sbjct: 222 GCGVAMG 228


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 GCGVSAG 10
GCGV+ G
Sbjct: 222 GCGVAMG 228


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 GCGVSAG 10
GCGV+ G
Sbjct: 222 GCGVAMG 228


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 2 SGGCG 6
SGGCG
Sbjct: 221 SGGCG 225


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 3 GGCGVSA 9
GGCG A
Sbjct: 594 GGCGACA 600




93|Sequence|461|470|GVSAGNGKGV

>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GVSAGNG 7
GV+AGNG
Sbjct: 5 GVNAGNG 11


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 SAGNGKGV 10
+AG+GKGV
Sbjct: 761 AAGDGKGV 768


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 1 GVSAGNGKGV 10
G S G+G+GV
Sbjct: 18 GASEGSGEGV 27


>sp|HCGF_METLZ|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanocorpusculum labreanum

Query: 1 GVSAGNGKG 9
G +AG GKG
Sbjct: 103 GTTAGIGKG 111


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 3 SAGNGKG 9
SAG GKG
Sbjct: 382 SAGRGKG 388


>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 GVSAGNGKG 9
G S+G G+G
Sbjct: 144 GASSGKGRG 152


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 3 SAGNGKG 9
SAG GKG
Sbjct: 375 SAGKGKG 381


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 GVSAGNGKGV 10
G +AG GK V
Sbjct: 377 GTAAGTGKRV 386


>sp|THIE_ARCFU|THIAMINE-PHOSPHATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVSAGN 6
GVSAGN
Sbjct: 105 GVSAGN 110




94|Sequence|466|475|NGKGVRIEFD

>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GKGVRIEF 9
GKG RIEF
Sbjct: 330 GKGTRIEF 337


>sp|KTHY_THESM|PROBABLE thymidylate kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 NGKGVRIEFD 10
NG+ +R EFD
Sbjct: 148 NGRSIRSEFD 157


>sp|KTHY_THEON|PROBABLE thymidylate kinase|Thermococcus onnurineus (strain NA1)

Query: 1 NGKGVRIEFD 10
NG+ ++ EFD
Sbjct: 146 NGRSIKTEFD 155


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 GKGVRIEF 9
GKG R+EF
Sbjct: 330 GKGTRVEF 337


>sp|KTHY_THEGJ|PROBABLE thymidylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NGKGVRIEFD 10
NG+ ++ EFD
Sbjct: 148 NGRSIKTEFD 157


>sp|GLNA_PYRFU|GLUTAMINE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKGVRIEF 9
GKG RIE+
Sbjct: 312 GKGARIEY 319


>sp|GLNA_PYRWO|GLUTAMINE synthetase|Pyrococcus woesei

Query: 2 GKGVRIEF 9
GKG RIE+
Sbjct: 312 GKGARIEY 319


>sp|RNP3_HALS3|RIBONUCLEASE P protein component 3|Halobacterium salinarum (strain ATCC 29341

Query: 4 GVRIEFD 10
GVR+EFD
Sbjct: 125 GVRLEFD 131


>sp|RNP3_HALMA|RIBONUCLEASE P protein component 3|Haloarcula marismortui (strain ATCC 43049

Query: 4 GVRIEFD 10
GVR+EFD
Sbjct: 127 GVRVEFD 133


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GKGVRIEF 9
GK RIEF
Sbjct: 338 GKATRIEF 345


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KGVRIEFD 10
KG+RIE D
Sbjct: 345 KGIRIEVD 352


>sp|SYP_HALSA|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GKGVRIEFD 10
+GVR+ FD
Sbjct: 322 AQGVRVHFD 330


>sp|SYP_HALS3|PROLINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GKGVRIEFD 10
+GVR+ FD
Sbjct: 322 AQGVRVHFD 330


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 NGKGVRIEF 9
NGK +R+ F
Sbjct: 550 NGKPIRVRF 558


>sp|PUR2_METB6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoregula boonei (strain DSM 21154

Query: 2 GKGVRI 7
GKGVRI
Sbjct: 153 GKGVRI 158


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NGKGVRIEFD 10
NG+ VRI+ D
Sbjct: 1014 NGEPVRIKID 1023


>sp|TRPCD_ARCFU|TRYPTOPHAN biosynthesis protein TrpCD|Archaeoglobus fulgidus (strain ATCC

Query: 4 GVRIEFD 10
GVRIE D
Sbjct: 342 GVRIEMD 348


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 GKGVRIE 8
GKG++IE
Sbjct: 179 GKGIKIE 185


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 GKGVRI 7
GKGVRI
Sbjct: 288 GKGVRI 293


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GKGVRIEF 9
GKG R+E
Sbjct: 326 GKGTRVEL 333


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 GKGVRIEFD 10
G G RIE D
Sbjct: 277 GLGARIELD 285


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NGKGVRIEF 9
NG G+ +EF
Sbjct: 81 NGPGIPLEF 89


>sp|TRM56_PYRAB|TRNA (cytidine(56)-2'-O)-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 1 NGKGVRIEF 9
GKG+R EF
Sbjct: 148 EGKGLRKEF 156


>sp|PUR2_METMJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GKGVRI 7
GKGVRI
Sbjct: 155 GKGVRI 160


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GKGVRIE 8
GKGV++E
Sbjct: 284 GKGVKVE 290


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 2 GKGVRIE 8
GKGV++E
Sbjct: 284 GKGVKVE 290


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GKGVRIE 8
GKGV++E
Sbjct: 284 GKGVKVE 290




95|Sequence|471|480|RIEFDDENDI

>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IEFDDEND 9
I FDD+ND
Sbjct: 205 IPFDDDND 212


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IEFDDENDI 10
+EF DENDI
Sbjct: 241 VEFFDENDI 249


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IEFDDE 7
+EFDDE
Sbjct: 103 VEFDDE 108


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 2 IEFDDENDI 10
+EF DENDI
Sbjct: 241 VEFFDENDI 249


>sp|DTDA_METM5|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C5 /

Query: 2 IEFDDENDI 10
+EF DENDI
Sbjct: 241 VEFFDENDI 249


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RIEFDDENDI 10
RIE++D+ D+
Sbjct: 125 RIEYEDDADV 134


>sp|SYT_CENSY|THREONINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 IEFDDEND 9
IEF DEN+
Sbjct: 448 IEFVDENN 455


>sp|TRPC_SACS2|INDOLE-3-GLYCEROL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IEFDDENDI 10
IE +DEND+
Sbjct: 158 IEINDENDL 166


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RIEFDDEND 9
R+E DD +D
Sbjct: 327 RVELDDRDD 335


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 RIEFDDENDI 10
R+ DDEN++
Sbjct: 89 RVNLDDENNL 98


>sp|TOP6A_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC

Query: 2 IEFDDENDI 10
IE+ DE+D+
Sbjct: 53 IEYSDESDV 61


>sp|SYFB_METKA|PHENYLALANINE--TRNA ligase beta subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 IEFDDENDI 10
+EF+DE D+
Sbjct: 110 VEFEDERDL 118


>sp|RNP1_METMP|RIBONUCLEASE P protein component 1|Methanococcus maripaludis (strain DSM 14266

Query: 1 RIEFDDEN 8
RI+F+ EN
Sbjct: 60 RIQFESEN 67


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 IEFDDEND 9
+ +D+END
Sbjct: 304 VSYDEEND 311


>sp|ABLA_METMA|L-LYSINE 2,3-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 FDDENDI 10
+D+END+
Sbjct: 399 YDEENDV 405


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 IEFDDEND 9
+ +D+END
Sbjct: 304 VSYDEEND 311


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 RIEFDDENDI 10
RI DDE+DI
Sbjct: 378 RIVSDDEHDI 387




96|Sequence|476|485|DENDINVGGT

>sp|DPHB_METTH|DIPHTHINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DENDINVGG 9
DENDI++ G
Sbjct: 11 DENDISIKG 19


>sp|RS4E_METS3|SMALL ribosomal subunit protein eS4|Methanobrevibacter smithii (strain

Query: 1 DENDINVG 8
DEND NVG
Sbjct: 149 DENDYNVG 156


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 1 DENDINV 7
DEN++NV
Sbjct: 343 DENEVNV 349


>sp|DPHB_METTP|DIPHTHINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DENDINVGG 9
DE DI+V G
Sbjct: 11 DERDISVKG 19


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DINVGG 9
D+N+GG
Sbjct: 208 DVNIGG 213


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DINVGG 9
D+N+GG
Sbjct: 114 DVNIGG 119


>sp|Y797_METJA|UNCHARACTERIZED ABC transporter permease MJ0797|Methanocaldococcus jannaschii

Query: 3 NDINVG 8
ND+NVG
Sbjct: 139 NDVNVG 144


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ENDINVGG 9
++D+N+GG
Sbjct: 233 KDDMNIGG 240


>sp|GPM_THEAC|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC

Query: 2 ENDINVGG 9
E+DINV G
Sbjct: 11 ESDINVKG 18


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 3 NDINVGGT 10
ND+ +GGT
Sbjct: 224 NDVVIGGT 231




97|Sequence|481|490|NVGGTNTAVD

>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGGTNTAVD 10
+GG NTA+D
Sbjct: 299 IGGGNTAMD 307


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 NVGGTNTAVD 10
NVGG A+D
Sbjct: 892 NVGGLRAAID 901


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NVGGTNTAVD 10
N+G +NT +D
Sbjct: 67 NIGTSNTLID 76


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VGGTNTAVD 10
VGG ++AVD
Sbjct: 157 VGGGDSAVD 165


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VGGTNTAVD 10
VGG ++AVD
Sbjct: 157 VGGGDSAVD 165


>sp|AROE_PYRFU|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NVGGTNTAVD 10
N+G NT V+
Sbjct: 85 NIGSVNTVVN 94




98|Sequence|486|495|NTAVDTTSVA

>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NTAVDTTSV 9
NT+ DT SV
Sbjct: 760 NTSADTLSV 768




99|Sequence|491|500|TTSVAEARHN

***** No hits found ******


100|Sequence|496|505|EARHNPSIGE

>sp|METK_HALSA|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 ARHNPSIGE 10
A H P++GE
Sbjct: 195 AEHTPAVGE 203


>sp|METK_HALS3|S-ADENOSYLMETHIONINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 ARHNPSIGE 10
A H P++GE
Sbjct: 195 AEHTPAVGE 203


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RHNPSIGE 10
+ NP+IGE
Sbjct: 187 KKNPAIGE 194


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 3 RHNPSIGE 10
RH+P IG+
Sbjct: 208 RHSPEIGK 215


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 RHNPSIGE 10
RH+P IG+
Sbjct: 207 RHSPEIGK 214


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 3 RHNPSIGE 10
RH+P IG+
Sbjct: 208 RHSPEIGK 215


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 3 RHNPSIGE 10
RH+P IG+
Sbjct: 208 RHSPEIGK 215


>sp|RL15E_THEAC|LARGE ribosomal subunit protein eL15|Thermoplasma acidophilum (strain

Query: 1 EARHNPSI 8
E RH PSI
Sbjct: 32 EWRHGPSI 39


>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 3 RHNPSIGE 10
RH+P IG+
Sbjct: 208 RHSPEIGK 215


>sp|FTSZ1_THEKO|CELL division protein FtsZ 1|Thermococcus kodakarensis (strain ATCC

Query: 2 ARHNPSIGE 10
A +NP IGE
Sbjct: 101 AGNNPKIGE 109


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EARHNPSI 8
+++HNPS+
Sbjct: 21 KSKHNPSL 28


>sp|RRP4_ARCFU|EXOSOME complex component Rrp4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EARHNPSIGE 10
+ R+ PS+G+
Sbjct: 50 KGRYTPSVGD 59




101|Sequence|501|510|PSIGEGSVGG

>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SIGEGSVGG 10
S+G G++GG
Sbjct: 188 SLGAGAIGG 196


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 211 PAITDGSIG 219


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 211 PAITDGSIG 219


>sp|OGT_SULTO|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IGEGSVGG 10
IGE S+GG
Sbjct: 124 IGEKSLGG 131


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 210 PAITDGSIG 218


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 210 PAITDGSIG 218


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 206 PAITDGSIG 214


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 211 PAITDGSIG 219


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 211 PAITDGSIG 219


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 3 IGEGSVGG 10
+G+GS+GG
Sbjct: 88 VGKGSMGG 95


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM

Query: 1 PSIGEGSVGG 10
P +GE ++GG
Sbjct: 40 PKLGEKALGG 49


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PSIGEGSVG 9
P+I +GS+G
Sbjct: 211 PAITDGSIG 219




102|Sequence|506|515|GSVGGLTGSL

>sp|PURQ_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanopyrus kandleri (strain AV19 /

Query: 1 GSVGGLTG 8
GSVGG+TG
Sbjct: 178 GSVGGITG 185


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GSVGGLTGS 9
G+VGG TGS
Sbjct: 548 GAVGGSTGS 556


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GSVGGLTGS 9
G+VGG TGS
Sbjct: 548 GAVGGSTGS 556


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GSVGGLTGS 9
G+VGG TGS
Sbjct: 548 GAVGGSTGS 556


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 2 SVGGLTGSL 10
++GG+TGS+
Sbjct: 381 NIGGVTGSM 389


>sp|DTDA_METPE|D-AMINOACYL-TRNA deacylase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 VGGLTGSL 10
+GGLTGSL
Sbjct: 205 IGGLTGSL 212


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GSVGGLTGSL 10
G++ GLTG+L
Sbjct: 128 GTLAGLTGAL 137


>sp|HPRL_HALUD|HGPRTASE-LIKE protein|Halorhabdus utahensis (strain DSM 12940

Query: 1 GSVGGLTGSL 10
G++ G+TG+L
Sbjct: 128 GTLAGITGAL 137


>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSVGGLTGSL 10
G VGG+ G+L
Sbjct: 148 GVVGGMGGNL 157


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 SVGGLTGSL 10
S GG+TG L
Sbjct: 238 SYGGVTGDL 246


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSVGGLTGSL 10
GS+G +TG +
Sbjct: 390 GSLGAMTGGV 399




103|Sequence|511|520|LTGSLSASGS

>sp|LONB_ARCFU|ARCHAEAL Lon protease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTGSLSASG 9
+TGSLS G
Sbjct: 533 MTGSLSVKG 541


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LTGSLSASG 9
+TGSLS G
Sbjct: 549 MTGSLSVRG 557


>sp|LONB_THEKO|ARCHAEAL Lon protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LTGSLSASG 9
+TGSLS G
Sbjct: 545 MTGSLSVRG 553


>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LTGSLSASG 9
+TGSLS G
Sbjct: 549 MTGSLSVRG 557


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTGSLSASG 9
+TGSLS G
Sbjct: 1014 MTGSLSVRG 1022


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 LTGSLSASG 9
+TGSLS G
Sbjct: 883 MTGSLSVRG 891


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTGSLSASGS 10
+TGSL SG+
Sbjct: 574 ITGSLDLSGN 583


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LTGSLSASG 9
LTGSLS G
Sbjct: 548 LTGSLSIRG 556




104|Sequence|516|525|SASGSHMDRI

>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SASGSHM 7
SASGSH+
Sbjct: 37 SASGSHI 43


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 GSHMDR 9
GSH+DR
Sbjct: 224 GSHLDR 229


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GSHMDR 9
GSH+DR
Sbjct: 226 GSHLDR 231




105|Sequence|521|530|HMDRIGAIRD

>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 2 MDRIGAIRD 10
M++IG+IRD
Sbjct: 37 MEKIGSIRD 45


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HMDRIGAIR 9
H +R GA+R
Sbjct: 194 HTERFGAVR 202


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HMDRIGAI 8
H+D IGA+
Sbjct: 132 HLDHIGAL 139


>sp|TPIS_METMA|TRIOSEPHOSPHATE isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HMDRIGA 7
HMD IGA
Sbjct: 63 HMDGIGA 69


>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 HMDRIGAI 8
H+D IGA+
Sbjct: 86 HLDHIGAV 93


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 1 HMDRIG 6
H+DRIG
Sbjct: 196 HLDRIG 201


>sp|SIHH_METKA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanopyrus kandleri (strain AV19 /

Query: 1 HMDRIGAIRD 10
HM +GAIR+
Sbjct: 30 HMPVLGAIRE 39


>sp|RNJ_HALSA|RIBONUCLEASE J|Halobacterium salinarum (strain ATCC 700922

Query: 1 HMDRIGAI 8
H+D IGAI
Sbjct: 83 HLDHIGAI 90


>sp|TRPA_METJA|TRYPTOPHAN synthase alpha chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HMDRIGAIRD 10
H+D G I+D
Sbjct: 243 HLDENGQIKD 252


>sp|TPIS_METAC|TRIOSEPHOSPHATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 HMDRIGA 7
HMD +GA
Sbjct: 63 HMDGVGA 69


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DRIGAIRD 10
DR+G +RD
Sbjct: 55 DRVGIVRD 62


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HMDRIGAI 8
H+D IGA+
Sbjct: 83 HLDHIGAV 90


>sp|AMPK_PYRFU|LYSYL aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HMDRIG 6
HMD+IG
Sbjct: 63 HMDKIG 68


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain

Query: 3 DRIGAIRD 10
++IG+IRD
Sbjct: 34 EKIGSIRD 41


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 1 HMDRIGAI 8
+DR+GAI
Sbjct: 256 QLDRVGAI 263


>sp|THIE_NATPD|THIAMINE-PHOSPHATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 MDRIGAIRD 10
+DRI A+RD
Sbjct: 148 LDRIRAVRD 156


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain

Query: 1 HMDRIG 6
H+DRIG
Sbjct: 32 HLDRIG 37


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HMDRIGAIRD 10
H+DRI I+D
Sbjct: 242 HVDRIMRIQD 251


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HMDRIG 6
HMD+IG
Sbjct: 68 HMDQIG 73


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 MDRIGAIRD 10
MDR+ IRD
Sbjct: 120 MDRVIVIRD 128




106|Sequence|526|535|GAIRDNLSET

>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 GAIRDNLSE 9
A+RDN+ E
Sbjct: 645 AALRDNIKE 653




107|Sequence|531|540|NLSETASTMA

***** No hits found ******


108|Sequence|536|545|ASTMALAGAS

>sp|AMT1_METJA|AMMONIUM transporter Amt1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ASTMALAG 8
A+TMALAG
Sbjct: 229 ATTMALAG 236




109|Sequence|541|550|LAGASITGSL

>sp|PRPB_AERPE|2-METHYLISOCITRATE lyase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LAGASITGSL 10
L+GA+ITGSL
Sbjct: 50 LSGAAITGSL 59


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 2 AGASITGS 9
AGA ITG+
Sbjct: 119 AGAQITGN 126


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 2 AGASITGS 9
AGA ITG+
Sbjct: 121 AGAQITGN 128


>sp|MTRA_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanosarcina acetivorans (strain

Query: 2 AGASITGS 9
AGA+ITGS
Sbjct: 44 AGAAITGS 51


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AGASITGS 9
AGA ITG+
Sbjct: 121 AGAQITGN 128


>sp|UVRC_METTH|UVRABC system protein C|Methanothermobacter thermautotrophicus (strain

Query: 1 LAGASITGSL 10
+AG S TGS+
Sbjct: 384 IAGESATGSV 393


>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 1 LAGASITGSL 10
LAGAS GSL
Sbjct: 232 LAGASTLGSL 241


>sp|MTRA_METMS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanohalophilus mahii (strain

Query: 2 AGASITG 8
AGASITG
Sbjct: 44 AGASITG 50




110|Sequence|546|555|ITGSLSGSAM

>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 ITGSLSGS 8
+TGS+SG+
Sbjct: 647 VTGSVSGN 654


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITGSLSGSAM 10
+TG L+G+A+
Sbjct: 402 VTGDLTGTAI 411


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TGSLSGS 8
TGSL+GS
Sbjct: 250 TGSLAGS 256


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain

Query: 2 TGSLSGSA 9
TGSL+G+A
Sbjct: 88 TGSLTGAA 95




111|Sequence|551|560|SGSAMVNCFN

>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GSAMVNC 8
G AMVNC
Sbjct: 280 GKAMVNC 286


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GSAMVNC 8
G AMVNC
Sbjct: 278 GKAMVNC 284


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GSAMVNCFN 10
G A+VNC N
Sbjct: 470 GLAIVNCLN 478


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 2 GSAMVNCFN 10
G A+VNC N
Sbjct: 471 GLAIVNCLN 479


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 2 GSAMVNC 8
G AM+NC
Sbjct: 280 GQAMINC 286


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GSAMVNC 8
G AM+NC
Sbjct: 280 GKAMINC 286


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 AMVNCFN 10
A+VNC N
Sbjct: 472 AIVNCLN 478




112|Sequence|556|565|VNCFNRLEVQ

>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 VNCFNRL 7
V CFNRL
Sbjct: 55 VRCFNRL 61


>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 1 VNCFNRL 7
+ CFNR+
Sbjct: 49 IRCFNRM 55


>sp|Y241_ARCFU|S-ADENOSYL-L-METHIONINE-BINDING protein AF_0241|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VNCFNRLEVQ 10
++C N+LE Q
Sbjct: 128 IDCVNQLEGQ 137


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCFNRL 7
NC+N+L
Sbjct: 217 NCYNKL 222


>sp|ARFB_METM7|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C7 /

Query: 2 NCFNRLE 8
NCF R+E
Sbjct: 125 NCFIRME 131


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM

Query: 1 VNCFNRLEV 9
V CF+ LE+
Sbjct: 23 VKCFHGLEI 31




113|Sequence|561|570|RLEVQADVQK

>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 1 RLEVQAD 7
RLEV+AD
Sbjct: 125 RLEVEAD 131


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 3 EVQADVQK 10
EVQADV++
Sbjct: 291 EVQADVEE 298




114|Sequence|566|575|ADVQKERYSL

>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 DVQKERYSL 10
+++KERY++
Sbjct: 318 NIRKERYTI 326


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 3 VQKERYS 9
+QKER+S
Sbjct: 228 IQKERFS 234


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 3 VQKERYS 9
+QKER+S
Sbjct: 228 IQKERFS 234


>sp|PDXT_PYRCJ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrobaculum calidifontis

Query: 1 ADVQKERYSL 10
DV++ RY+L
Sbjct: 10 GDVEEHRYAL 19


>sp|RNH2_THESM|RIBONUCLEASE HII|Thermococcus sibiricus (strain DSM 12597

Query: 1 ADVQKERYSL 10
ADV +ER+ +
Sbjct: 107 ADVNEERFGI 116


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 3 VQKERY 8
+QKERY
Sbjct: 231 IQKERY 236


>sp|Y1675_SACI1|UPF0200 protein YN1551_1675|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ADVQKERYSL 10
+DV ++RYS+
Sbjct: 39 SDVVRKRYSI 48


>sp|Y1277_SACI2|UPF0200 protein LS215_1277|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ADVQKERYSL 10
+DV ++RYS+
Sbjct: 39 SDVVRKRYSI 48


>sp|Y1244_SACI3|UPF0200 protein M1627_1244|Saccharolobus islandicus (strain M.16.27)

Query: 1 ADVQKERYSL 10
+DV ++RYS+
Sbjct: 39 SDVVRKRYSI 48


>sp|Y1180_SACI4|UPF0200 protein M1425_1180|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ADVQKERYSL 10
+DV ++RYS+
Sbjct: 39 SDVVRKRYSI 48


>sp|Y1169_SACI6|UPF0200 protein M164_1169|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ADVQKERYSL 10
+DV ++RYS+
Sbjct: 39 SDVVRKRYSI 48


>sp|Y1041_SACS2|UPF0200 protein SSO1041|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ADVQKERYSL 10
+DV ++RYS+
Sbjct: 39 SDVVRKRYSI 48




115|Sequence|571|580|ERYSLSGESG

>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 1 ERYSLSGESG 10
ERY++ GESG
Sbjct: 323 ERYTILGESG 332


>sp|Y3410_METJA|UNCHARACTERIZED protein MJECS10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERYSLSGESG 10
+RYSLS ++G
Sbjct: 35 KRYSLSSKTG 44


>sp|G1PDH_AERPE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Aeropyrum pernix (strain ATCC 700893

Query: 1 ERYSLSGESG 10
ERY++ GE G
Sbjct: 327 ERYTILGEKG 336


>sp|G1PDH_THEVO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ERYSLSGES 9
ERY++ GES
Sbjct: 327 ERYTILGES 335


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ERYSLSGES 9
ERY++ GES
Sbjct: 327 ERYTILGES 335


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ERYSLSGES 9
ERY+ +GES
Sbjct: 170 ERYAATGES 178


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ERYSLSGES 9
+RYS++G+S
Sbjct: 266 KRYSITGQS 274


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 1 ERYSLSGESG 10
E Y+L+G+ G
Sbjct: 60 ENYNLTGKKG 69


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 1 ERYSLSG 7
ERY LSG
Sbjct: 242 ERYGLSG 248


>sp|PUR1_METTH|AMIDOPHOSPHORIBOSYLTRANSFERASE thermautotrophicus (strain ATCC 29096

Query: 2 RYSLSGES 9
RYS +GES
Sbjct: 85 RYSTTGES 92


>sp|TRPB_HALVD|TRYPTOPHAN synthase beta chain|Haloferax volcanii (strain ATCC 29605

Query: 1 ERYSLSGESG 10
ERY L E G
Sbjct: 31 ERYVLDNEDG 40


>sp|FLUC1_METAC|FLUORIDE-SPECIFIC ion channel FluC 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RYSLSG 7
RYSLSG
Sbjct: 18 RYSLSG 23




116|Sequence|576|585|SGESGTVSLG

>sp|RL11_METBU|LARGE ribosomal subunit protein uL11|Methanococcoides burtonii (strain

Query: 1 SGESGTVSLG 10
SGESGTV +G
Sbjct: 85 SGESGTVVVG 94




117|Sequence|581|590|TVSLGTVSDN

>sp|RL13_NATPD|LARGE ribosomal subunit protein uL13|Natronomonas pharaonis (strain ATCC

Query: 2 VSLGTVSDN 10
VSLG VS+N
Sbjct: 129 VSLGEVSEN 137




118|Sequence|586|595|TVSDNASTKA

>sp|NUSA_HALMO|PROBABLE transcription termination protein NusA|Halococcus morrhuae

Query: 1 TVSDNASTKA 10
T+S+NAST A
Sbjct: 91 TISENASTVA 100




119|Sequence|591|600|ASTKAMAGSI

>sp|K6PF_METJA|BIFUNCTIONAL ADP-specific glucokinase/phosphofructokinase|Methanocaldococcus

Query: 1 ASTKAMAGSI 10
ASTKA G+I
Sbjct: 379 ASTKAKLGNI 388


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 3 TKAMAGSI 10
TKAM G+I
Sbjct: 374 TKAMKGNI 381


>sp|GLKA_PYRAB|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 TKAMAGSI 10
TKAM G+I
Sbjct: 368 TKAMLGNI 375




120|Sequence|596|605|MAGSILNSYI

>sp|TREH_THEVO|TREHALASE volcanium (strain ATCC 51530

Query: 2 AGSILNSYI 10
AG I+NSY+
Sbjct: 386 AGGIVNSYL 394


>sp|UPP_AERPE|URACIL phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 MAGSILNSYI 10
+AGSIL YI
Sbjct: 38 IAGSILAVYI 47


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MAGSILNSYI 10
+AGS++NS I
Sbjct: 221 IAGSVINSDI 230


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MAGSILNSYI 10
+AGS++NS I
Sbjct: 221 IAGSVINSDI 230


>sp|THI4_METIK|THIAMINE thiazole synthase|Methanotorris igneus (strain DSM 5666

Query: 1 MAGSILNSY 9
+AG ++NSY
Sbjct: 143 VAGVVINSY 151


>sp|THI4_METJA|THIAMINE thiazole synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MAGSILNSY 9
+AG ++NSY
Sbjct: 148 VAGVVINSY 156




121|Sequence|601|610|LNSYIPLDKE

>sp|MRE11_METJA|DNA double-strand break repair protein|Methanocaldococcus jannaschii

Query: 1 LNSYIPLDKE 10
+N YIPLD E
Sbjct: 161 INPYIPLDYE 170


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LNSYIPLDK 9
LN+++PLD+
Sbjct: 93 LNNFLPLDR 101


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LNSYIPLDKE 10
L +++P DKE
Sbjct: 503 LGTHLPFDKE 512


>sp|Y1526_METJA|UPF0280 protein MJ1526|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNSYIPLDKE 10
L SY P+D E
Sbjct: 49 LTSYFPVDVE 58


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NSYIPLD 8
N+YIP D
Sbjct: 173 NAYIPTD 179


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 4 YIPLDKE 10
YIP DK+
Sbjct: 33 YIPADKQ 39


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 LNSYIP 6
LNSY+P
Sbjct: 334 LNSYVP 339


>sp|Y534_METJA|UNCHARACTERIZED protein MJ0534|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSYIPLDK 9
NSY+ LDK
Sbjct: 38 NSYLILDK 45


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 3 SYIPLDK 9
+YIPLD+
Sbjct: 180 NYIPLDE 186




122|Sequence|606|615|PLDKEGNSME

>sp|CCA_PYRAB|CCA-ADDING enzyme|Pyrococcus abyssi (strain GE5 /

Query: 1 PLDKEGNSME 10
P DK+GN +E
Sbjct: 278 PRDKKGNYLE 287


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 PLDKEGN 7
PLDK GN
Sbjct: 288 PLDKNGN 294


>sp|RUXX_METTH|PUTATIVE snRNP Sm-like protein|Methanothermobacter thermautotrophicus

Query: 1 PLDKEGNSM 9
PLD GNS+
Sbjct: 14 PLDALGNSL 22


>sp|RADB_THEVO|DNA repair and recombination protein|Thermoplasma volcanium (strain

Query: 4 KEGNSME 10
KEGNS+E
Sbjct: 212 KEGNSVE 218


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DKEGNSME 10
DKEGN+ E
Sbjct: 22 DKEGNAEE 29


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLDKEGNS 8
P DK+GN+
Sbjct: 85 PQDKDGNA 92




123|Sequence|611|620|GNSMEVQVDI

>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GNSMEVQVDI 10
G+S+EV+VD+
Sbjct: 19 GDSIEVEVDL 28


>sp|PMDHS_METTH|PHOSPHOMEVALONATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 2 NSMEVQVD 9
+SMEV+VD
Sbjct: 116 DSMEVEVD 123




124|Sequence|616|625|VQVDIESKPS

>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 QVDIESKPS 10
++DIE +PS
Sbjct: 114 ELDIEERPS 122


>sp|GLYA_METJA|SERINE hydroxymethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VQVDIESKP 9
V +DIES P
Sbjct: 315 VIIDIESSP 323




125|Sequence|621|630|ESKPSKFRHN

>sp|TDH_PYRFU|L-THREONINE 3-dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SKPSKFRHN 10
S+PS+FR N
Sbjct: 198 SEPSEFRRN 206


>sp|TRPG2_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 3 KPSKFRHN 10
KPS+ RH+
Sbjct: 100 KPSEVRHD 107


>sp|RRP4_METBF|EXOSOME complex component Rrp4|Methanosarcina barkeri (strain Fusaro /

Query: 1 ESKPSKF 7
ESKP+KF
Sbjct: 223 ESKPAKF 229


>sp|LYSY_CENSY|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 KPSKFRH 9
KP+K RH
Sbjct: 202 KPAKHRH 208


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 KPSKFRH 9
KP+K RH
Sbjct: 202 KPAKHRH 208


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ESKPSKFRH 9
E KP F+H
Sbjct: 304 EGKPMPFQH 312


>sp|RS19E_ARCFU|SMALL ribosomal subunit protein eS19|Archaeoglobus fulgidus (strain

Query: 2 SKPSKFR 8
SKP KFR
Sbjct: 83 SKPPKFR 89




126|Sequence|626|635|KFRHNSGSSS

>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 FRHNSG 7
FRH+SG
Sbjct: 284 FRHDSG 289


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FRHNSG 7
FRH+SG
Sbjct: 286 FRHDSG 291


>sp|ARTE_METJA|PROBABLE archaeosortase E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KFRHNSGSS 9
K+RH+S S
Sbjct: 174 KYRHSSNKS 182




127|Sequence|631|640|SGSSSVDDGS

>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 2 GSSSVDD 8
GSSS+DD
Sbjct: 242 GSSSLDD 248


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SGSSSVDDGS 10
SGS ++ DGS
Sbjct: 917 SGSVTLSDGS 926


>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 1 SGSSSVDDG 9
SGSS V DG
Sbjct: 137 SGSSGVVDG 145




128|Sequence|636|645|VDDGSATRSH

>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DDGSATRSH 10
+DG+A R+H
Sbjct: 140 EDGNAIRAH 148


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 DGSATRSH 10
DGS RSH
Sbjct: 671 DGSFVRSH 678




129|Sequence|641|650|ATRSHAGGSS

>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 4 SHAGGS 9
SHAGGS
Sbjct: 141 SHAGGS 146


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 1 ATRSHAGGSS 10
A+R+H GG++
Sbjct: 342 ASRTHYGGTT 351




130|Sequence|646|655|AGGSSSGLPE

>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 2 GGSSSGLP 9
GG S+GLP
Sbjct: 345 GGPSTGLP 352


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 2 GGSSSGLP 9
GG S+GLP
Sbjct: 345 GGPSTGLP 352


>sp|HDRD_METTT|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit D|Methanosarcina thermophila

Query: 1 AGGSSSGLPE 10
GG +GLP+
Sbjct: 339 GGGVKAGLPD 348


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 GGSSSGLP 9
GG S+GLP
Sbjct: 353 GGPSTGLP 360


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 AGGSSSG 7
AGGSSSG
Sbjct: 168 AGGSSSG 174




131|Sequence|651|660|SGLPEGKSSA

>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 2 GLPEGKS 8
GLP+G+S
Sbjct: 36 GLPDGRS 42


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GLPEGKSS 9
G+PEGK +
Sbjct: 36 GVPEGKEN 43


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GLPEGKSS 9
G+PEGK +
Sbjct: 36 GVPEGKEN 43


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GLPEGKSS 9
G+PEGK +
Sbjct: 36 GVPEGKEN 43


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GLPEGK 7
G+PEGK
Sbjct: 36 GVPEGK 41


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GLPEGKSS 9
G+PEGK +
Sbjct: 36 GVPEGKEN 43


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SGLPEGKS 8
G+PEGK+
Sbjct: 37 DGIPEGKA 44


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 3 LPEGKS 8
LPEGKS
Sbjct: 42 LPEGKS 47


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 3 LPEGKS 8
LPEGKS
Sbjct: 42 LPEGKS 47


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LPEGKSS 9
LPEGK S
Sbjct: 374 LPEGKMS 380


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLPEGKS 8
GLP+GK+
Sbjct: 36 GLPQGKA 42


>sp|MDH_METAC|MALATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLPEGKS 8
GLP+GK+
Sbjct: 36 GLPQGKA 42


>sp|MDH_THEAC|MALATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GLPEGKS 8
G+PEGK+
Sbjct: 38 GIPEGKA 44


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 SGLPEGK 7
+GLPEG+
Sbjct: 534 TGLPEGE 540


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 3 LPEGKS 8
LPEGKS
Sbjct: 41 LPEGKS 46




132|Sequence|656|665|GKSSATKWSK

>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 1 GKSSATKWSK 10
GK++ TKW +
Sbjct: 67 GKTAVTKWVR 76


>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 1 GKSSATKWS 9
G+SS TKW
Sbjct: 28 GRSSGTKWD 36


>sp|SYM_METTH|METHIONINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 SSATKWSK 10
SSA WSK
Sbjct: 261 SSAAAWSK 268


>sp|RL2_METLZ|LARGE ribosomal subunit protein uL2|Methanocorpusculum labreanum (strain

Query: 2 KSSATKWSK 10
K+SAT+W +
Sbjct: 183 KTSATRWPR 191


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKSSATKW 8
GK SAT W
Sbjct: 371 GKESATAW 378


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 SSATKWSK 10
SSA +WS+
Sbjct: 261 SSAAQWSR 268




133|Sequence|661|670|TKWSKEATAG

>sp|HTR7_HALSA|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 700922

Query: 1 TKWSKEATAG 10
T S+EATAG
Sbjct: 227 TTASREATAG 236


>sp|HTR7_HALS3|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 29341

Query: 1 TKWSKEATAG 10
T S+EATAG
Sbjct: 227 TTASREATAG 236


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 1 TKWSKEATA 9
TK++KE TA
Sbjct: 212 TKFTKEMTA 220




134|Sequence|666|675|EATAGKKSKS

***** No hits found ******


135|Sequence|671|680|KKSKSGKLRK

>sp|F16PA_METLZ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KKSKSGKLR 9
KKS SGKLR
Sbjct: 257 KKSASGKLR 265


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KSGKLRK 10
KSGK+RK
Sbjct: 381 KSGKIRK 387


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain ATCC

Query: 2 KSKSGKLRK 10
KSK+G+LR+
Sbjct: 293 KSKAGELRR 301




136|Sequence|676|685|GKLRKKGNMK

>sp|CARA_METTH|CARBAMOYL phosphate synthase small chain|Methanothermobacter

Query: 2 KLRKKGNMK 10
K+R KG MK
Sbjct: 121 KIRDKGTMK 129


>sp|KDPB_HALSA|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 GKLRKKGN 8
GKLR+K N
Sbjct: 450 GKLRQKSN 457


>sp|KDPB_HALS3|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Halobacterium salinarum (strain ATCC

Query: 1 GKLRKKGN 8
GKLR+K N
Sbjct: 450 GKLRQKSN 457


>sp|PURO_METST|IMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GKLRKKGNMK 10
GK+R+ NMK
Sbjct: 82 GKIREGMNMK 91


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KLRKKG 7
KLRKKG
Sbjct: 167 KLRKKG 172


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KLRKKG 7
KLRKKG
Sbjct: 167 KLRKKG 172


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KLRKKG 7
KLRKKG
Sbjct: 167 KLRKKG 172


>sp|RIBL_METTP|FAD synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GKLRKKGNM 9
G+LRK+G M
Sbjct: 106 GELRKRGLM 114


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 1 GKLRKKGNMK 10
G++RK GN+K
Sbjct: 181 GEVRKFGNIK 190


>sp|Y380_METJA|UNCHARACTERIZED protein MJ0380|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KLRKKGNMK 10
KL+KKGN++
Sbjct: 61 KLKKKGNIE 69




137|Sequence|681|690|KGNMKINETR

>sp|Y1266_ARCFU|UNCHARACTERIZED protein AF_1266|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KGNMKINETR 10
+GN+KI E+R
Sbjct: 26 RGNVKITESR 35


>sp|SYE_SULTO|GLUTAMATE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GNMKINE 8
GN+KINE
Sbjct: 533 GNLKINE 539


>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 1 KGNMKINETR 10
K N+K+NE R
Sbjct: 43 KLNVKVNEVR 52




138|Sequence|686|695|INETREDMDA

>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 INETREDMDA 10
INE R ++DA
Sbjct: 780 INEVRSEIDA 789


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NETREDMDA 10
+ETRE+++A
Sbjct: 346 DETREEVEA 354


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 INETREDMD 9
I+E+RED++
Sbjct: 321 IHESREDLE 329


>sp|GLNB2_METIV|NITROGEN fixation nifHD region GlnB-like|Methanobacterium ivanovii

Query: 1 INETREDMDA 10
IN T+E +DA
Sbjct: 13 INRTKEVLDA 22




139|Sequence|691|700|EDMDAQLLEQ

>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 2 DMDAQLLEQ 10
D+DA+LLE+
Sbjct: 142 DIDAKLLEE 150




140|Sequence|696|705|QLLEQQSTNS

***** No hits found ******


141|Sequence|701|710|QSTNSSEFEA

>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QSTNSSEFE 9
Q+ NS+EF+
Sbjct: 392 QNANSTEFD 400




142|Sequence|706|715|SEFEAPSLSD

>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 1 SEFEAPSLSD 10
+EFEAP +D
Sbjct: 423 TEFEAPDTTD 432


>sp|HIS7_METBU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 1 SEFEAPSLSD 10
+EFEAP + +
Sbjct: 119 AEFEAPRVGE 128


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SEFEAPSLSD 10
SE + PSL+D
Sbjct: 570 SETQTPSLTD 579




143|Sequence|711|720|PSLSDSMPSV

>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PSLSDSMP 8
P+LSDS P
Sbjct: 423 PALSDSYP 430




144|Sequence|716|725|SMPSVADSHS

>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MPSVADSHS 10
MP DSHS
Sbjct: 50 MPGGIDSHS 58


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SMPSVADSHS 10
P VAD HS
Sbjct: 154 EQPVVADKHS 163


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 SMPSVADSHS 10
+ P VA+SHS
Sbjct: 88 AYPKVAESHS 97




145|Sequence|721|730|ADSHSSHFSE

>sp|KAD6_THEKO|PUTATIVE adenylate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ADSHSSHF 8
AD H SHF
Sbjct: 70 ADGHLSHF 77


>sp|LIPA_SULAC|LIPOYL synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ADSHSSHFSE 10
AD +SHFS+
Sbjct: 103 ADGGASHFSQ 112


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DSHSSHFSE 10
DS+ +HF+E
Sbjct: 126 DSYGAHFTE 134


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 2 DSHSSHFSE 10
D H+SH E
Sbjct: 112 DEHTSHVPE 120


>sp|SYK_PYRAB|LYSINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 DSHSSHFSE 10
DS++ HF E
Sbjct: 101 DSYAEHFME 109


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSHSSHF 8
DS+S HF
Sbjct: 97 DSYSEHF 103


>sp|KAD6_THEON|PUTATIVE adenylate kinase|Thermococcus onnurineus (strain NA1)

Query: 2 DSHSSHF 8
D H SHF
Sbjct: 71 DGHLSHF 77


>sp|KAD6_THEGJ|PUTATIVE adenylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 DSHSSHF 8
D H SHF
Sbjct: 71 DGHLSHF 77


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ADSHSSHFSE 10
AD S HF+E
Sbjct: 115 ADGGSEHFAE 124


>sp|GLCDH_HALMA|GLUCOSE 1-dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DSHSSHFSE 10
+SH SHF +
Sbjct: 300 NSHVSHFED 308




146|Sequence|726|735|SHFSEFSCSD

>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 HFSEFSCS 9
HF EFSC+
Sbjct: 88 HFDEFSCT 95


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 2 HFSEFSCSD 10
HF E C+D
Sbjct: 125 HFHEVGCAD 133


>sp|DPHB_ARCFU|DIPHTHINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HFSEFSC 8
HF EF C
Sbjct: 229 HFMEFEC 235


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 1 SHFSEFSCS 9
+ F+EF+C+
Sbjct: 375 TEFNEFACA 383


>sp|HIS6_METAC|IMIDAZOLE glycerol phosphate synthase subunit|Methanosarcina acetivorans

Query: 2 HFSEFS 7
HFSE+S
Sbjct: 251 HFSEYS 256


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SHFSEFSCSD 10
SH +E C D
Sbjct: 234 SHLTEKECED 243


>sp|Y1496_METJA|UPF0127 protein MJ1496|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EFSCSD 10
EF CSD
Sbjct: 94 EFKCSD 99


>sp|APGM2_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanocaldococcus jannaschii (strain

Query: 3 FSEFSCSD 10
F+E SCS+
Sbjct: 374 FNEISCSN 381




147|Sequence|731|740|FSCSDLESMK

>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FSCSDLESMK 10
F C++LE +K
Sbjct: 409 FECTELEEVK 418


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FSCSDLESMK 10
F C++LE +K
Sbjct: 409 FDCTELEEVK 418


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FSCSDLESMK 10
F C DL+ +K
Sbjct: 409 FDCVDLDEVK 418


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 SCSDLESMK 10
+C D+ES K
Sbjct: 104 ACKDIESAK 112




148|Sequence|736|745|LESMKTSCSH

***** No hits found ******


149|Sequence|741|750|TSCSHGSSDY

>sp|TRPD_PICTO|ANTHRANILATE phosphoribosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 SHGSSDY 10
SHGS+D+
Sbjct: 111 SHGSADF 117


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SCSHG 6
SCSHG
Sbjct: 413 SCSHG 417


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 HGSSDY 10
HGS DY
Sbjct: 90 HGSRDY 95


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 HGSSDY 10
HGS DY
Sbjct: 136 HGSHDY 141


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 5 HGSSDY 10
HGS DY
Sbjct: 136 HGSHDY 141


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 HGSSDY 10
HGS DY
Sbjct: 151 HGSHDY 156


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 HGSSDY 10
HGS DY
Sbjct: 136 HGSHDY 141


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 HGSSDY 10
HGS DY
Sbjct: 136 HGSHDY 141


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 SHGSSDY 10
+HG SDY
Sbjct: 409 THGISDY 415


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SCSHGSSDY 10
SCS GS+++
Sbjct: 435 SCSCGSNEF 443


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 1 TSCSHGSSDY 10
T C HG Y
Sbjct: 65 TGCHHGDCHY 74


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 1 TSCSHGSSDY 10
T C HG Y
Sbjct: 65 TGCHHGDCHY 74


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 1 TSCSHGSSD 9
T C HG+ D
Sbjct: 232 TICMHGTED 240




150|Sequence|746|755|GSSDYHTRFA

>sp|RL18_SULAC|LARGE ribosomal subunit protein uL18|Sulfolobus acidocaldarius (strain

Query: 1 GSSDYHTRF 9
G +DY+TR+
Sbjct: 17 GKTDYYTRY 25


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 1 GSSDYHTRF 9
G +DYH R
Sbjct: 17 GKTDYHQRL 25


>sp|TRUA_PYRHO|TRNA pseudouridine synthase A|Pyrococcus horikoshii (strain ATCC

Query: 3 SDYHTRF 9
SD+H RF
Sbjct: 93 SDFHPRF 99


>sp|CSA2A_SACS2|CRISPR-ASSOCIATED protein Cas7/Csa2 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SSDYHTRFA 10
SS +H R+A
Sbjct: 159 SSQFHVRYA 167


>sp|RL18_METBU|LARGE ribosomal subunit protein uL18|Methanococcoides burtonii (strain

Query: 1 GSSDYHTRF 9
G +DYH R
Sbjct: 17 GRTDYHQRL 25


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 1 GSSDYHTR 8
GS+DY T+
Sbjct: 143 GSNDYKTK 150


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 2 SSDYHTR 8
++DYHT+
Sbjct: 463 NTDYHTK 469


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 2 SSDYHTR 8
++DYHT+
Sbjct: 464 NTDYHTK 470


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 2 SSDYHTR 8
++DYHT+
Sbjct: 464 NTDYHTK 470




151|Sequence|751|760|HTRFATVNIL

>sp|Y191_METTH|PUTATIVE glutamine amidotransferase MTH_191|Methanothermobacter

Query: 1 HTRFATVNIL 10
HTRF+T +I+
Sbjct: 155 HTRFSTESIV 164


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 HTRFATVNIL 10
HTRF T+ L
Sbjct: 126 HTRFGTLGAL 135


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 126 HTKFGTLGAL 135


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 131 HTKFGTLGAL 140


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 1 HTRFATVNIL 10
HT+F T+ L
Sbjct: 125 HTKFGTLGAL 134




152|Sequence|756|765|TVNILPEVEN

>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TVNILPEVEN 10
T+ LPE+EN
Sbjct: 348 TLKTLPELEN 357


>sp|COBQ_METVS|PROBABLE cobyric acid synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 TVNILPE 7
TVN+LPE
Sbjct: 178 TVNLLPE 184


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 2 VNILPEVEN 10
+ I+P VEN
Sbjct: 298 IGIVPSVEN 306


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 ILPEVEN 10
+LPE++N
Sbjct: 29 VLPEIDN 35


>sp|ALBA2_METKA|DNA/RNA-BINDING protein Alba 2|Methanopyrus kandleri (strain AV19 /

Query: 3 NILPEVE 9
N++PEVE
Sbjct: 54 NVMPEVE 60


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 2 VNILPEVEN 10
VNILP E+
Sbjct: 413 VNILPSAED 421


>sp|CAS6A_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Saccharolobus solfataricus (strain ATCC

Query: 2 VNILPEVE 9
VN+LPE++
Sbjct: 91 VNVLPELD 98


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 VNILPEVEN 10
+NI PE+ N
Sbjct: 124 INIAPELAN 132




153|Sequence|761|770|PEVENDRLEN

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 PEVENDRL 8
PEV NDRL
Sbjct: 8280 PEVSNDRL 8287


>sp|Y119_PYRAB|UPF0173 protein PYRAB01190|Pyrococcus abyssi (strain GE5 /

Query: 1 PEVENDRLE 9
P+V+ DR+E
Sbjct: 26 PDVDEDRME 34


>sp|Y120_PYRHO|UPF0173 protein PH0120|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PEVENDRLE 9
P+V+ DR+E
Sbjct: 26 PDVDEDRME 34


>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PEVENDRLEN 10
PE N+ LEN
Sbjct: 209 PEASNEALEN 218


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEVENDRL 8
P+VEND L
Sbjct: 425 PDVENDVL 432


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 1 PEVENDRL 8
PEVE D+L
Sbjct: 108 PEVEFDKL 115


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PEVENDRLEN 10
P V N RLE+
Sbjct: 75 PRVPNPRLED 84


>sp|TRM4_METJA|TRNA (cytosine(48)-C(5))-methyltransferase|Methanocaldococcus

Query: 1 PEVENDRLEN 10
PEV RLEN
Sbjct: 22 PEVLKKRLEN 31


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EVENDRLE 9
+VEN+RL+
Sbjct: 506 DVENERLD 513


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PEVENDRLE 9
P E+DR+E
Sbjct: 65 PRAESDRVE 73




154|Sequence|766|775|DRLENSPHQC

>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRLENSPHQ 9
D LEN+PH+
Sbjct: 11 DGLENTPHR 19


>sp|PSTB_AERPE|PHOSPHATE import ATP-binding protein PstB|Aeropyrum pernix (strain ATCC

Query: 1 DRLENSPHQ 9
DRL + PHQ
Sbjct: 140 DRLSDYPHQ 148


>sp|Y1508_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 DRLENSPHQ 9
DRL + PHQ
Sbjct: 133 DRLNHYPHQ 141


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 2 RLENSPH 8
RL+N+PH
Sbjct: 274 RLDNTPH 280


>sp|RS11_KORCO|SMALL ribosomal subunit protein uS11|Korarchaeum cryptofilum (strain

Query: 1 DRLENSPH 8
DRLE SP+
Sbjct: 46 DRLEGSPY 53


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RLENSPH 8
R+EN+PH
Sbjct: 258 RIENTPH 264


>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 3 LENSPHQC 10
LEN+ H+C
Sbjct: 210 LENAGHEC 217


>sp|RS11_NANEQ|SMALL ribosomal subunit protein uS11|Nanoarchaeum equitans (strain

Query: 1 DRLENSP 7
DRLE SP
Sbjct: 43 DRLEGSP 49


>sp|EF1B_NATPD|ELONGATION factor 1-beta|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DRLENS 6
DRLENS
Sbjct: 24 DRLENS 29


>sp|LYSK_THEKO|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Thermococcus kodakarensis

Query: 2 RLENSPHQ 9
RL+++PH+
Sbjct: 294 RLDHTPHE 301


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 1 DRLENSP 7
D+LEN P
Sbjct: 223 DKLENKP 229


>sp|Y1556_METJA|UNCHARACTERIZED protein MJ1556|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RLENSPHQC 10
RL N P +C
Sbjct: 51 RLANLPEEC 59


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RLENSPHQ 9
RLEN HQ
Sbjct: 285 RLENITHQ 292


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 3 LENSPHQC 10
LEN H+C
Sbjct: 183 LENPNHEC 190


>sp|BACS1_HALSA|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 700922

Query: 3 LENSPHQ 9
L+ SPHQ
Sbjct: 29 LDGSPHQ 35


>sp|BACS1_HALS3|SENSORY rhodopsin-1|Halobacterium salinarum (strain ATCC 29341

Query: 3 LENSPHQ 9
L+ SPHQ
Sbjct: 29 LDGSPHQ 35


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RLENSPHQC 10
+ EN+P++C
Sbjct: 148 KYENNPYKC 156




155|Sequence|771|780|SPHQCSISVV

>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PHQCSISVV 10
PH+C I +V
Sbjct: 75 PHKCPIIIV 83


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PHQCSISVV 10
PH+C I +V
Sbjct: 75 PHKCPIIIV 83


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 PHQCSISVV 10
PH+C I +V
Sbjct: 75 PHKCPIIIV 83


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 PHQCSI 7
PHQC++
Sbjct: 119 PHQCTL 124


>sp|Y099_SACS2|UPF0173 metal-dependent hydrolase SSO0099|Saccharolobus solfataricus

Query: 2 PHQCSISV 9
P+Q SISV
Sbjct: 171 PYQASISV 178




156|Sequence|776|785|SISVVTQTAS

>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SISVVTQTAS 10
SIS + QTAS
Sbjct: 260 SISAILQTAS 269




157|Sequence|781|790|TQTASCSEVS

***** No hits found ******


158|Sequence|786|795|CSEVSQLNHI

>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EVSQLNHI 10
E+SQLN+I
Sbjct: 169 EISQLNYI 176


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 3 EVSQLNHI 10
EVS L+HI
Sbjct: 294 EVSDLDHI 301


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EVSQLNHI 10
EVSQLN +
Sbjct: 229 EVSQLNEL 236


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 3 EVSQLNHI 10
EVSQLN +
Sbjct: 229 EVSQLNEL 236


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 3 EVSQLNHI 10
EVSQLN +
Sbjct: 229 EVSQLNEL 236


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 3 EVSQLNHI 10
EVSQLN +
Sbjct: 229 EVSQLNEL 236


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 3 EVSQLNHI 10
EVSQLN +
Sbjct: 229 EVSQLNEL 236


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 3 EVSQLNHI 10
EVSQLN +
Sbjct: 229 EVSQLNEL 236


>sp|TPIS_METLZ|TRIOSEPHOSPHATE isomerase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CSEVSQLNHI 10
C E ++ NH+
Sbjct: 105 CVEAAKFNHL 114


>sp|ARFB_METM7|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C7 /

Query: 3 EVSQLNH 9
E+S+LNH
Sbjct: 117 EISKLNH 123




159|Sequence|791|800|QLNHIAEEHG

>sp|PGK_ARCFU|PHOSPHOGLYCERATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLNHIAEEHG 10
QLN AEEH
Sbjct: 123 QLNRSAEEHA 132


>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 QLNHIAEEHG 10
QL +AEE+G
Sbjct: 139 QLRQLAEEYG 148


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LNHIAEEHG 10
+NH++EE G
Sbjct: 24 INHLSEEAG 32


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 1 QLNHIAEEHG 10
+ NH A+E+G
Sbjct: 332 EANHFADEYG 341


>sp|PRIL_ARCFU|DNA primase large subunit PriL|Archaeoglobus fulgidus (strain ATCC

Query: 1 QLNHIAEEHG 10
Q+ HIA E G
Sbjct: 322 QVEHIAGERG 331


>sp|GGGPS_METM5|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 QLNHIAEEHG 10
+LN+I EE G
Sbjct: 11 KLNNIIEEEG 20


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 1 QLNHIAEEHG 10
+ NH A+E+G
Sbjct: 332 EANHFADEYG 341


>sp|SRP19_METKA|SIGNAL recognition particle 19 kDa|Methanopyrus kandleri (strain AV19 /

Query: 1 QLNHIAEEHG 10
+L HIAE+ G
Sbjct: 47 ELRHIAEKLG 56


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 2 LNHIAEEHG 10
L+ +AE+HG
Sbjct: 165 LSDVAEDHG 173


>sp|GGGPS_METJA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 QLNHIAEEHG 10
+LN I EE G
Sbjct: 11 RLNQIIEEEG 20


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LNHIAEEHG 10
LN +AEE G
Sbjct: 33 LNGLAEEQG 41


>sp|GGGPS_METM6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 QLNHIAEEHG 10
+LN I EE G
Sbjct: 11 KLNEIIEEEG 20


>sp|ASSY_PYRFU|ARGININOSUCCINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QLNHIAEEHG 10
+LN IA +HG
Sbjct: 237 KLNEIAGKHG 246


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 2 LNHIAEEHG 10
+NHI +E+G
Sbjct: 8 INHIFDENG 16


>sp|GPMI1_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanosarcina acetivorans (strain ATCC

Query: 1 QLNHIAEEHG 10
+LN +EHG
Sbjct: 168 KLNEFCKEHG 177


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 NHIAEEH 9
+HIA+EH
Sbjct: 532 HHIADEH 538


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 2 LNHIAEEH 9
+NHI ++H
Sbjct: 366 MNHITKQH 373


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 LNHIAEEHG 10
L+HI +E+G
Sbjct: 600 LDHIVKEYG 608


>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NHIAEEHG 10
N +AEE+G
Sbjct: 343 NELAEEYG 350


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 2 LNHIAEEHG 10
+NHI +E G
Sbjct: 8 INHIFDEEG 16




160|Sequence|796|805|AEEHGNNGIK

>sp|YBP2_ACIAM|UNCHARACTERIZED protein in bps2 5'region|Acidianus ambivalens (Desulfurolobus

Query: 2 EEHGNNGI 9
E HGNNGI
Sbjct: 77 EVHGNNGI 84


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 2 EEHGNNGIK 10
EE GN G+K
Sbjct: 85 EEFGNKGVK 93


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AEEHGNNGIK 10
++EH NN +K
Sbjct: 281 SDEHSNNSVK 290


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 EEHGNNGIK 10
+EH NN IK
Sbjct: 285 KEHTNNAIK 293


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EEHGNNG 8
E HG NG
Sbjct: 438 ERHGKNG 444


>sp|Y078_METJA|UNCHARACTERIZED protein MJ0078|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEHGNNGI 9
+E GNNG+
Sbjct: 194 KEFGNNGL 201


>sp|HIS4_SULTO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Sulfurisphaera tokodaii (strain

Query: 1 AEEHGNN 7
AEE+GNN
Sbjct: 55 AEENGNN 61


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 4 HGNNGIK 10
HGNN IK
Sbjct: 101 HGNNDIK 107


>sp|SYY_THEAC|TYROSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EEHGNNGI 9
E HG+NG+
Sbjct: 274 EIHGSNGV 281


>sp|RS19_SULTO|SMALL ribosomal subunit protein uS19|Sulfurisphaera tokodaii (strain DSM

Query: 3 EHGNNGIK 10
EHG G+K
Sbjct: 121 EHGEPGLK 128


>sp|RS19_METS5|SMALL ribosomal subunit protein uS19|Metallosphaera sedula (strain ATCC

Query: 3 EHGNNGIK 10
EHG G+K
Sbjct: 121 EHGEPGLK 128


>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 1 AEEHGNNGI 9
AEE G +GI
Sbjct: 475 AEEKGEDGI 483


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 EHGNNGIK 10
+HG +GIK
Sbjct: 7 DHGTSGIK 14


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 4 HGNNGI 9
HG NGI
Sbjct: 839 HGENGI 844


>sp|RS19_SULAC|SMALL ribosomal subunit protein uS19|Sulfolobus acidocaldarius (strain

Query: 3 EHGNNGIK 10
EHG G+K
Sbjct: 121 EHGEPGLK 128




161|Sequence|801|810|NNGIKPNVDL

>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 3 GIKPNVDL 10
GIKPNV+L
Sbjct: 241 GIKPNVEL 248


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 3 GIKPNVDL 10
GIKPN++L
Sbjct: 245 GIKPNIEL 252


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 3 GIKPNVDL 10
GIKPN++L
Sbjct: 244 GIKPNIEL 251


>sp|NROR_PYRFU|NAD(P)H:RUBREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GIKPNVDL 10
GI PNVDL
Sbjct: 223 GIVPNVDL 230


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 NNGIKPNVDL 10
N GI P VDL
Sbjct: 572 NKGIAPRVDL 581


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 3 GIKPNVDL 10
GIKPN +L
Sbjct: 241 GIKPNTEL 248


>sp|Y83B_METJA|PROBABLE pilin MJ0835.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGIKPNVDL 10
NGI PNV L
Sbjct: 69 NGINPNVTL 77


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIKPNVDL 10
G++PN++L
Sbjct: 243 GVRPNIEL 250


>sp|KCY_METJA|CYTIDYLATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGIKPNVDL 10
NGIKP++ +
Sbjct: 90 NGIKPDLTI 98


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 2 NGIKPNVDL 10
N +KP+VD+
Sbjct: 255 NAVKPSVDV 263


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 IKPNVD 9
+KPNVD
Sbjct: 213 LKPNVD 218


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 1 NNGIKPNVDL 10
NN +K NVD+
Sbjct: 188 NNDVKSNVDV 197


>sp|AROE_METAR|SHIKIMATE dehydrogenase (NADP(+))|Methanocella arvoryzae (strain DSM 22066

Query: 3 GIKPNVDL 10
G+KP VD+
Sbjct: 253 GVKPPVDV 260


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 NNGIKPNVDL 10
N+GIK VD+
Sbjct: 172 NDGIKKAVDI 181


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 2 NGIKPNVDL 10
NG+ NVDL
Sbjct: 166 NGLPENVDL 174


>sp|Y038_METJA|UNCHARACTERIZED protein MJ0038|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KPNVDL 10
KPNVD+
Sbjct: 64 KPNVDI 69


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NNGIKPN 7
NNGI PN
Sbjct: 129 NNGIVPN 135


>sp|TBP_METTL|TATA-BOX-BINDING protein|Methanothermococcus thermolithotrophicus

Query: 3 GIKPNVD 9
GI+PN+D
Sbjct: 108 GIEPNLD 114


>sp|TBP_METJA|TATA-BOX-BINDING protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GIKPNVD 9
GI+PN+D
Sbjct: 111 GIEPNLD 117




162|Sequence|806|815|PNVDLYFGDA

>sp|CBIT_METVS|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 2 NVDLYFGDA 10
N ++YFGDA
Sbjct: 81 NCEVYFGDA 89


>sp|Y670_METJA|UNCHARACTERIZED protein MJ0670|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NVDLYFGDA 10
N++LY GDA
Sbjct: 161 NINLYVGDA 169


>sp|RSMA_THEGJ|PROBABLE ribosomal RNA small subunit|Thermococcus gammatolerans (strain

Query: 1 PNVDLYFGDA 10
PNV+L GDA
Sbjct: 87 PNVELIKGDA 96


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PNVDLYFG 8
PNVD Y G
Sbjct: 233 PNVDPYLG 240


>sp|RSMA_THEKO|PROBABLE ribosomal RNA small subunit|Thermococcus kodakarensis (strain

Query: 1 PNVDLYFGDA 10
PNV++ GDA
Sbjct: 87 PNVEIIEGDA 96


>sp|Y398_METJA|UNCHARACTERIZED protein MJ0398|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VDLYFGDA 10
+ +YFGDA
Sbjct: 78 IGVYFGDA 85


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DLYFGDA 10
D+Y+GDA
Sbjct: 41 DIYWGDA 47


>sp|HIS4_SACS2|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Saccharolobus solfataricus

Query: 1 PNVDLYFGDA 10
P++D+ FG A
Sbjct: 6 PSIDISFGKA 15


>sp|Y194_PYRAB|UPF0146 protein PYRAB01940|Pyrococcus abyssi (strain GE5 /

Query: 1 PNVDLYFG 8
PN+ LY G
Sbjct: 67 PNISLYMG 74


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 1 PNVDLYFGD 9
P +DL FG+
Sbjct: 342 PKLDLVFGN 350


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 2 NVDLYFGD 9
N D YFGD
Sbjct: 281 NPDSYFGD 288


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter

Query: 2 NVDLYFGDA 10
NVD+ GDA
Sbjct: 91 NVDVIVGDA 99


>sp|ACDE2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 1 PNVDLYFGD 9
PN D+ FG+
Sbjct: 148 PNADMSFGN 156


>sp|CAS2_METRM|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanobrevibacter ruminantium (strain ATCC

Query: 4 DLYFGD 9
+LYFGD
Sbjct: 33 NLYFGD 38


>sp|Y818_PYRAE|MEMO1 family protein PAE0818|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PNVDLYFGD 9
P + YFGD
Sbjct: 143 PFIQYYFGD 151


>sp|PSTB_HALWD|PHOSPHATE import ATP-binding protein PstB|Haloquadratum walsbyi (strain DSM

Query: 2 NVDLYFGD 9
++D+Y+GD
Sbjct: 52 DLDVYYGD 59


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 2 NVDLYFGD 9
N D YFGD
Sbjct: 281 NPDSYFGD 288


>sp|PSTB2_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 2 NVDLYFGD 9
N+D+++GD
Sbjct: 58 NLDVWYGD 65


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 PNVDLYFGD 9
P V LY GD
Sbjct: 378 PTVRLYSGD 386


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 PNVDLYF 7
P+VDL+F
Sbjct: 306 PDVDLHF 312


>sp|Y062_PYRAR|MEMO1 family protein Pars_0062|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PNVDLYFGD 9
P + YFGD
Sbjct: 143 PFIQYYFGD 151


>sp|TPIS_HALSA|TRIOSEPHOSPHATE isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PNVDLYFG 8
P+VD+Y G
Sbjct: 164 PSVDVYCG 171


>sp|CISY_SACS2|CITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PNVDLYFG 8
PN D Y G
Sbjct: 310 PNTDFYSG 317


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NVDLYF 7
NVDLY+
Sbjct: 154 NVDLYY 159


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 PNVDLYFGDA 10
PNV + GDA
Sbjct: 70 PNVVIIVGDA 79


>sp|Y390_METJA|UNCHARACTERIZED protein MJ0390|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VDLYFGD 9
VD+Y GD
Sbjct: 20 VDIYLGD 26


>sp|Y1397_METJA|UNCHARACTERIZED protein MJ1397|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 LYFGDA 10
LYFGD+
Sbjct: 154 LYFGDS 159




163|Sequence|811|820|YFGDALKETN

>sp|EF2_METVS|ELONGATION factor 2|Methanococcus vannielii (strain ATCC 35089

Query: 1 YFGDALKETN 10
Y GDA++E N
Sbjct: 643 YMGDAIREIN 652


>sp|EF2_METMP|ELONGATION factor 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 YFGDALKETN 10
Y GD +KE N
Sbjct: 643 YMGDGMKEIN 652


>sp|EF2_METM7|ELONGATION factor 2|Methanococcus maripaludis (strain C7 /

Query: 1 YFGDALKETN 10
Y GD +KE N
Sbjct: 643 YMGDGMKEIN 652


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 1 YFGDALKETN 10
Y GD +KE N
Sbjct: 643 YMGDGMKEIN 652


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 1 YFGDALKETN 10
Y GD +KE N
Sbjct: 643 YMGDGMKEIN 652


>sp|EF2_META3|ELONGATION factor 2|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 YFGDALKE 8
Y GDA+KE
Sbjct: 643 YMGDAMKE 650


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 YFGDALKET 9
Y GDAL+ T
Sbjct: 205 YIGDALRAT 213


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 1 YFGDALKET 9
Y GDAL+ T
Sbjct: 205 YIGDALRAT 213


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 362 HFGMAIKET 370


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 349 HFGMAIKET 357


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 317 HFGMAVKET 325


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 316 HFGVAVKET 324


>sp|DHQS_METM6|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 349 HFGMAIKET 357


>sp|DHQS_METM7|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 349 HFGMAIKET 357


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 1 YFGDALKETN 10
+FGDAL+ N
Sbjct: 54 HFGDALEIAN 63


>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 349 HFGMAIKET 357


>sp|DHQS_METM5|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 YFGDALKET 9
+FG A+KET
Sbjct: 349 HFGMAIKET 357


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 4 DALKETN 10
+ALKETN
Sbjct: 191 NALKETN 197


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GDALKE 8
GDALKE
Sbjct: 69 GDALKE 74


>sp|KDGK_THETE|2-DEHYDRO-3-DEOXYGLUCONOKINASE tenax

Query: 1 YFGDALK 7
YF DALK
Sbjct: 255 YFRDALK 261


>sp|AATC_PYRHO|A-TYPE ATP synthase subunit C|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FGDALKE 8
+GDALK+
Sbjct: 287 YGDALKD 293


>sp|SERB_ARCFU|PHOSPHOSERINE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YFGDALKE 8
YF D LKE
Sbjct: 228 YFTDRLKE 235


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 4 DALKETN 10
DALKET+
Sbjct: 167 DALKETD 173




164|Sequence|816|825|LKETNNNHSH

>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LKETNNNHSH 10
LK+TN + SH
Sbjct: 154 LKDTNQDLSH 163


>sp|Y1873_ARCFU|UNCHARACTERIZED protein AF_1873|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKETNNNHS 9
L+E NN HS
Sbjct: 356 LRELNNAHS 364


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKETNNNH 8
LKE NNN+
Sbjct: 573 LKEINNNY 580


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 2 KETNNNH 8
K NNNH
Sbjct: 289 KSKNNNH 295




165|Sequence|821|830|NNHSHQTMEL

>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 3 HSHQTMEL 10
HSHQT E+
Sbjct: 568 HSHQTAEI 575


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 3 HSHQTMEL 10
HSHQT E+
Sbjct: 568 HSHQTAEI 575


>sp|SYY_NANEQ|TYROSINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 NNHSHQTMEL 10
N +HQTME
Sbjct: 309 NKKTHQTMEF 318


>sp|RADA_DESA1|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 NNHSHQTMEL 10
N+H HQ M L
Sbjct: 237 NSHLHQLMRL 246


>sp|RADA_DESAM|DNA repair and recombination protein|Desulfurococcus amylolyticus

Query: 1 NNHSHQTMEL 10
N+H HQ M L
Sbjct: 237 NSHLHQLMRL 246


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 1 NNHSHQTMEL 10
N H HQ M L
Sbjct: 230 NRHLHQLMRL 239


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 1 NNHSHQTMEL 10
N H HQ M L
Sbjct: 230 NRHLHQLMRL 239




166|Sequence|826|838|QTMELKVAIQTEI

>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 4 ELKVAIQT 11
ELK+AIQT
Sbjct: 137 ELKIAIQT 144


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 MELKVAIQTEI 13
ME+K A +TEI
Sbjct: 284 MEIKTAKRTEI 294


>sp|AROC_METBF|CHORISMATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QTMELKVAIQTEI 13
QT++LK TEI
Sbjct: 310 QTVDLKTLENTEI 322






THE END