RIR2B_HUMAN Blast Output
HumanVirus
1|Sequence|1|10|MGDPERPEAA

>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP RPE
Sbjct: 2770 GDPPRPE 2776


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 GDPERPE 8
GDP RPE
Sbjct: 2793 GDPPRPE 2799


>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 GDPERPE 8
GDP RPE
Sbjct: 2793 GDPPRPE 2799


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 3 DPERPE 8
DPERPE
Sbjct: 1044 DPERPE 1049


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 3 DPERPE 8
DPERPE
Sbjct: 1044 DPERPE 1049


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 2 GDPERPEA 9
GD RPEA
Sbjct: 406 GDSSRPEA 413


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2770 GDPPKPE 2776


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2793 GDPPKPE 2799


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2771 GDPPQPE 2777


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2771 GDPPQPE 2777


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2771 GDPPQPE 2777


>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 DPERPE 8
+P+RPE
Sbjct: 726 EPDRPE 731


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2771 GDPPQPE 2777


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2770 GDPPQPE 2776


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2771 GDPPQPE 2777


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2770 GDPPQPE 2776


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2770 GDPPQPE 2776


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 2 GDPERPE 8
GDP PE
Sbjct: 681 GDPATPE 687


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GDPERPE 8
GDP +PE
Sbjct: 2770 GDPPQPE 2776


>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 MGDPERPEAA 10
+GDP PE A
Sbjct: 50 LGDPLFPELA 59


>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 MGDPERPEAA 10
+GDP PE A
Sbjct: 50 LGDPLFPELA 59


>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 MGDPERPEAA 10
+GDP PE A
Sbjct: 50 LGDPLFPELA 59


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 2 GDPERP 7
G+PE P
Sbjct: 576 GEPEHP 581


>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 GDPERP 7
GDP RP
Sbjct: 397 GDPPRP 402


>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 3 DPERPEA 9
DP+RP A
Sbjct: 42 DPQRPPA 48


>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 GDPERP 7
GDP RP
Sbjct: 397 GDPPRP 402


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 GDPERP 7
G P+RP
Sbjct: 723 GGPDRP 728


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 GDPERP 7
G P+RP
Sbjct: 725 GGPDRP 730


>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 GDPERP 7
G P+RP
Sbjct: 728 GPPDRP 733


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 3 DPERPEAA 10
DP RP AA
Sbjct: 1233 DPARPFAA 1240


>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)

Query: 4 PERPEAA 10
PE PEAA
Sbjct: 123 PETPEAA 129


>sp|ICP47_HHV11|ICP47 protein|Human herpesvirus 1 (strain 17)

Query: 3 DPERP 7
DPERP
Sbjct: 46 DPERP 50


>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 1 MGDPERPE 8
+G+P PE
Sbjct: 301 VGNPSHPE 308


>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 MGDPERPE 8
+G+P PE
Sbjct: 301 VGNPSHPE 308




2|Sequence|6|15|RPEAAGLDQD

>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 PEAAGLDQD 10
P+++GLD D
Sbjct: 2804 PDSSGLDDD 2812


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 3 EAAGLDQD 10
E+AG+D+D
Sbjct: 2753 ESAGIDED 2760


>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PEAAGLD 8
PE +GLD
Sbjct: 410 PEMSGLD 416


>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)

Query: 1 RPEAAGLDQD 10
+P AAG +QD
Sbjct: 2436 KPLAAGDEQD 2445


>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)

Query: 1 RPEAAGLDQD 10
+P AAG +QD
Sbjct: 2437 KPLAAGDEQD 2446


>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)

Query: 1 RPEAAGLDQD 10
+P AAG +QD
Sbjct: 2397 KPLAAGDEQD 2406


>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)

Query: 1 RPEAAGLDQD 10
+P AAG +QD
Sbjct: 2436 KPLAAGDEQD 2445


>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 RPEAAGLDQD 10
+P AAG +QD
Sbjct: 2397 KPLAAGDEQD 2406


>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 395 PELTGLD 401


>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 394 PELTGLD 400


>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 382 PELTGLD 388


>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 395 PELTGLD 401


>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 390 PELTGLD 396


>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong

Query: 2 PEAAGLD 8
PE GLD
Sbjct: 410 PELTGLD 416


>sp|IL10H_EBVG|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 2 PEAAGLDQ 9
PE G DQ
Sbjct: 19 PECGGTDQ 26


>sp|IL10H_EBVB9|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 2 PEAAGLDQ 9
PE G DQ
Sbjct: 19 PECGGTDQ 26


>sp|IL10H_EBVA8|VIRAL interleukin-10 homolog|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 2 PEAAGLDQ 9
PE G DQ
Sbjct: 19 PECGGTDQ 26


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 2 PEAAGLD 8
PE+AG D
Sbjct: 93 PESAGQD 99


>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)

Query: 2 PEAAGL 7
PEAAG+
Sbjct: 872 PEAAGM 877


>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)

Query: 2 PEAAGL 7
PEAAG+
Sbjct: 872 PEAAGM 877




3|Sequence|11|20|GLDQDERSSS

>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1

Query: 1 GLDQDER 7
G+D DER
Sbjct: 172 GMDDDER 178


>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain

Query: 1 GLDQDE 6
G+DQDE
Sbjct: 449 GIDQDE 454




4|Sequence|16|25|ERSSSDTNES

>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P

Query: 2 RSSSDTNES 10
RSS+DT ES
Sbjct: 151 RSSTDTAES 159


>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)

Query: 2 RSSSDTNE 9
RSS DT E
Sbjct: 2282 RSSGDTQE 2289




5|Sequence|21|30|DTNESEIKSN

>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 NESEIKSN 10
NESE K+N
Sbjct: 377 NESENKTN 384


>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 DTNESEI 7
+TNESE+
Sbjct: 459 NTNESEV 465


>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara)

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75


>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)

Query: 1 DTNESEIK 8
DT+ SEIK
Sbjct: 68 DTSASEIK 75




6|Sequence|26|35|EIKSNEEPLL

>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)

Query: 1 EIKSNEEPLL 10
EIK N PL+
Sbjct: 105 EIKGNSAPLI 114


>sp|NCAP_I80AA|NUCLEOPROTEIN A virus (strain A/India/6263/1980

Query: 2 IKSNEEP 8
I+SNE P
Sbjct: 316 IRSNENP 322


>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong

Query: 2 IKSNEEP 8
I+SNE P
Sbjct: 316 IRSNENP 322




7|Sequence|31|40|EEPLLRKSSR

>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)

Query: 1 EEPLLRKSSR 10
E P+LRK R
Sbjct: 276 ESPILRKKPR 285


>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38

Query: 1 EEPLLRKSSR 10
+ PL+RKSS+
Sbjct: 493 KRPLVRKSSK 502


>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)

Query: 1 EEPLLRK 7
EEPLLRK
Sbjct: 314 EEPLLRK 320


>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)

Query: 1 EEPLLRK 7
EEPLLRK
Sbjct: 314 EEPLLRK 320


>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)

Query: 2 EPLLRKSSR 10
+PL+R+S+R
Sbjct: 419 KPLVRRSAR 427


>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)

Query: 2 EPLLRKSSR 10
+PL+R+S+R
Sbjct: 421 KPLVRRSAR 429


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 1 EEPLLRKSSR 10
+E +LR SSR
Sbjct: 998 DESILRYSSR 1007


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank

Query: 2 EPLLRK 7
EPL+RK
Sbjct: 641 EPLIRK 646


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 EPLLRK 7
EPL+RK
Sbjct: 641 EPLIRK 646




8|Sequence|36|45|RKSSRRFVIF

>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 2 KSSRRFVIF 10
K+ RFVIF
Sbjct: 7 KNPNRFVIF 15


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 2 KSSRRFVIF 10
K+ RFVIF
Sbjct: 7 KNPNRFVIF 15




9|Sequence|41|50|RFVIFPIQYP

>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 RFVIFPIQY 9
RFVIFPIQY
Sbjct: 11 RFVIFPIQY 19


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RFVIFPIQY 9
RFVIFPIQY
Sbjct: 11 RFVIFPIQY 19


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 RFVIFPIQY 9
RFVIFPIQY
Sbjct: 11 RFVIFPIQY 19


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 RFVIFPIQY 9
RFVIFPIQY
Sbjct: 11 RFVIFPIQY 19


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 RFVIFPIQY 9
RFVIFPIQY
Sbjct: 11 RFVIFPIQY 19


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RFVIFPIQY 9
RFVIFPIQY
Sbjct: 11 RFVIFPIQY 19


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 1 RFVIFPIQYP 10
RFV F IQ P
Sbjct: 423 RFVPFHIQVP 432


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1 RFVIFPIQYP 10
RFV F IQ P
Sbjct: 521 RFVPFHIQVP 530


>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 445 RYVPFHIQVP 454


>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 472 RYVPFHIQVP 481


>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 437 RYVPFHIQVP 446


>sp|FUS_MEASZ|FUSION glycoprotein F0|Measles virus (strain Edmonston-Zagreb vaccine)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASY|FUSION glycoprotein F0|Measles virus (strain Yamagata-1) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASP|FUSION glycoprotein F0|Measles virus (strain Philadelphia-26) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASL|FUSION glycoprotein F0|Measles virus (strain Leningrad-16) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASI|FUSION glycoprotein F0|Measles virus (strain IP-3-Ca) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 281 FIVLSIAYP 289


>sp|FUS_MEASH|FUSION glycoprotein F0|Measles virus (strain Halle) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASF|FUSION glycoprotein F0|Measles virus (strain Edmonston B)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASE|FUSION glycoprotein F0|Measles virus (strain Edmonston) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|FUS_MEASC|FUSION glycoprotein F0|Measles virus (strain Ichinose-B95a) (MeV)

Query: 2 FVIFPIQYP 10
F++ I YP
Sbjct: 278 FIVLSIAYP 286


>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 447 RYVPFHIQVP 456


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 4 IFPIQYP 10
I P++YP
Sbjct: 1117 ILPLRYP 1123


>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain

Query: 4 IFPIQY 9
+FPI+Y
Sbjct: 297 VFPIKY 302


>sp|VIF_HV2BE|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 VIFPIQ 8
VIFP+Q
Sbjct: 57 VIFPLQ 62


>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 3 VIFPIQ 8
VIFP+Q
Sbjct: 57 VIFPLQ 62


>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 570 RYVPFHIQVP 579


>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 545 RYVPFHIQVP 554


>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 542 RYVPFHIQVP 551


>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 539 RYVPFHIQVP 548


>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 554 RYVPFHIQVP 563


>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 546 RYVPFHIQVP 555


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 5 FPIQY 9
FP+QY
Sbjct: 595 FPLQY 599


>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 525 RYVPFHIQVP 534


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1 RFVIFPIQYP 10
R+V F IQ P
Sbjct: 527 RYVPFHIQVP 536


>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 2 FVIFPIQY 9
+IFPI++
Sbjct: 325 LLIFPIEF 332


>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 FVIFPIQY 9
+IFPI++
Sbjct: 340 LLIFPIEF 347


>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain

Query: 4 IFPIQYP 10
I P+ YP
Sbjct: 478 ILPLSYP 484




10|Sequence|46|55|PIQYPDIWKM

>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 PIQYPDIWKM 10
PIQY DIW M
Sbjct: 16 PIQYHDIWNM 25


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 PIQYPDIWKM 10
PIQY DIW M
Sbjct: 16 PIQYHDIWNM 25


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 PIQYPDIWKM 10
PIQY DIW M
Sbjct: 16 PIQYHDIWNM 25


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 PIQYPDIWKM 10
PIQY DIW M
Sbjct: 16 PIQYHDIWNM 25


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 PIQYPDIWKM 10
PIQY DIW M
Sbjct: 16 PIQYHDIWNM 25


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 PIQYPDIWKM 10
PI Y DIWKM
Sbjct: 20 PIVYEDIWKM 29


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PIQYPDIWKM 10
PIQY DIW M
Sbjct: 16 PIQYYDIWNM 25


>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTAWQ 192


>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTAWQ 192


>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTAWQ 192


>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTAWQ 192


>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTSWQ 192


>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTAWQ 192


>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)

Query: 2 IQYPDIWK 9
IQYP W+
Sbjct: 185 IQYPTSWQ 192


>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 PIQYPD 6
P QYPD
Sbjct: 4 PTQYPD 9


>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain

Query: 1 PIQYPDIW 8
P YP IW
Sbjct: 325 PGNYPAIW 332


>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 PIQYPD 6
P QYPD
Sbjct: 4 PTQYPD 9


>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 PIQYPD 6
P QYPD
Sbjct: 4 PTQYPD 9


>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain

Query: 1 PIQYPD 6
P QYPD
Sbjct: 4 PTQYPD 9


>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 PIQYPD 6
P QYPD
Sbjct: 4 PTQYPD 9


>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A

Query: 2 IQYPDIW 8
I YP++W
Sbjct: 279 IGYPNLW 285


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 1 PIQYPDIW 8
PI Y ++W
Sbjct: 310 PIHYKNLW 317


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 1 PIQYPDIW 8
PI Y ++W
Sbjct: 310 PIHYKNLW 317


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 1 PIQYPDIW 8
PI Y ++W
Sbjct: 310 PIHYKNLW 317


>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B

Query: 2 IQYPDIW 8
I YP++W
Sbjct: 279 IGYPNLW 285


>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse

Query: 2 IQYPDI 7
I+YPD+
Sbjct: 828 IEYPDV 833


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 2 IQYPDI 7
I+YPD+
Sbjct: 828 IEYPDV 833


>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 IQYPDIWK 9
I YP I+K
Sbjct: 109 IHYPKIYK 116


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2 IQYPDIWK 9
I YP I+K
Sbjct: 109 IHYPKIYK 116


>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996

Query: 2 IQYPDIWK 9
I YP I+K
Sbjct: 109 IHYPKIYK 116


>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain

Query: 1 PIQYPDIW 8
P YP +W
Sbjct: 326 PGNYPALW 333


>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain

Query: 1 PIQYPDIW 8
P YP +W
Sbjct: 326 PGNYPALW 333


>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains

Query: 1 PIQYPDIW 8
P YP +W
Sbjct: 326 PGNYPALW 333


>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 2 IQYPDIWK 9
I YP I+K
Sbjct: 109 IHYPKIYK 116


>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945

Query: 2 IQYPDIWK 9
I YP I+K
Sbjct: 109 IHYPKIYK 116


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1 PIQYPDI 7
PIQY D+
Sbjct: 1463 PIQYRDV 1469


>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 999 RYNDTWKL 1006


>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 999 RYNDTWKL 1006


>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 999 RYNDTWKL 1006


>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United

Query: 5 PDIWK 9
PD+WK
Sbjct: 633 PDMWK 637


>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 927 RYNDTWKL 934


>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)

Query: 1 PIQYPDI 7
PIQ P+I
Sbjct: 2763 PIQVPEI 2769


>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus

Query: 2 IQYPDIW 8
+QY D W
Sbjct: 145 VQYDDYW 151


>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 IQYPDIW 8
+QY D W
Sbjct: 145 VQYDDYW 151


>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain

Query: 2 IQYPDIWK 9
+ YP I+K
Sbjct: 109 VHYPKIYK 116


>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 999 RYNDTWKL 1006


>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 999 RYNDTWKL 1006


>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)

Query: 3 QYPDIWKM 10
+Y D WK+
Sbjct: 999 RYNDTWKL 1006


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1 PIQYPDIWK 9
P++ P +W+
Sbjct: 91 PLENPTLWR 99


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 3 QYPDIWKM 10
QY + W M
Sbjct: 2799 QYSETWHM 2806


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 3 QYPDIWKM 10
QY + W M
Sbjct: 2799 QYSETWHM 2806


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 3 QYPDIWKM 10
QY + W M
Sbjct: 2799 QYSETWHM 2806


>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 YPDIWK 9
YP +W+
Sbjct: 7 YPSLWR 12


>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 4 YPDIWK 9
YP +W+
Sbjct: 7 YPSLWR 12


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 3 QYPDIW 8
QY D W
Sbjct: 2799 QYSDTW 2804


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 PIQYPDI 7
P+QY D+
Sbjct: 1458 PLQYKDL 1464


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 PIQYPDI 7
P+QY D+
Sbjct: 1456 PLQYKDL 1462


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 PIQYPDI 7
P+QY D+
Sbjct: 1456 PLQYKDL 1462


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 PIQYPDI 7
P+QY D+
Sbjct: 1458 PLQYKDL 1464


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 5 PDIW 8
PD+W
Sbjct: 2035 PDVW 2038


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 5 PDIWKM 10
P+IW+M
Sbjct: 1206 PEIWQM 1211


Query: 1 PIQYPD 6
PIQ PD
Sbjct: 831 PIQLPD 836


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 1 PIQYPDI 7
P+QY D+
Sbjct: 1455 PLQYKDL 1461


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 4 YPDIW 8
YP +W
Sbjct: 1144 YPGVW 1148


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)

Query: 4 YPDIW 8
YP +W
Sbjct: 1144 YPGVW 1148


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 4 YPDIW 8
YP +W
Sbjct: 1144 YPGVW 1148


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 4 YPDIW 8
YP +W
Sbjct: 1144 YPGVW 1148


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 4 YPDIW 8
YP +W
Sbjct: 1144 YPGVW 1148


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PIQYPD 6
PIQ PD
Sbjct: 835 PIQLPD 840


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PIQYPD 6
PIQ PD
Sbjct: 825 PIQLPD 830


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PIQYPD 6
PIQ PD
Sbjct: 825 PIQLPD 830


>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P

Query: 5 PDIWK 9
PD+W+
Sbjct: 42 PDLWR 46


>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PIQYPD 6
PIQ PD
Sbjct: 828 PIQLPD 833


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PIQYPD 6
PIQ PD
Sbjct: 825 PIQLPD 830




11|Sequence|51|60|DIWKMYKQAQ

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 DIWKMYKQA 9
DIWKMYK+A
Sbjct: 25 DIWKMYKKA 33


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 DIWKMYKQAQ 10
DIW MYK+A+
Sbjct: 21 DIWNMYKKAE 30


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 DIWKMYKQAQ 10
DIW MYK+A+
Sbjct: 21 DIWNMYKKAE 30


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 DIWKMYKQAQ 10
DIW MYK+A+
Sbjct: 21 DIWNMYKKAE 30


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DIWKMYKQAQ 10
DIW MYK+A+
Sbjct: 21 DIWNMYKKAE 30


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 DIWKMYKQAQ 10
DIW MYK+A+
Sbjct: 21 DIWNMYKKAE 30


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 DIWKMYKQAQ 10
DIW MYK+A+
Sbjct: 21 DIWNMYKKAE 30


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 1 DIWKMYKQ 8
D+W +YKQ
Sbjct: 1097 DLWVLYKQ 1104


>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 DIWKMYKQ 8
D+W +YKQ
Sbjct: 1097 DLWVLYKQ 1104


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 DIWKMY 6
D+W MY
Sbjct: 2111 DVWDMY 2116


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 DIWKMY 6
D+W MY
Sbjct: 2131 DVWDMY 2136


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 DIWKMY 6
D+W MY
Sbjct: 2161 DVWDMY 2166


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 DIWKMY 6
D+W MY
Sbjct: 2111 DVWDMY 2116


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 DIWKMY 6
D+W MY
Sbjct: 2131 DVWDMY 2136


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 DIWKMY 6
D+W MY
Sbjct: 2161 DVWDMY 2166


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4 KMYKQAQ 10
+MYKQA+
Sbjct: 4011 QMYKQAR 4017


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 4 KMYKQAQ 10
+MYKQA+
Sbjct: 3988 QMYKQAR 3994


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 KMYKQAQ 10
+MYKQA+
Sbjct: 4011 QMYKQAR 4017


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 KMYKQAQ 10
+MYKQA+
Sbjct: 3988 QMYKQAR 3994


>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 WKMYKQAQ 10
W+++ Q+Q
Sbjct: 40 WRLFLQSQ 47


>sp|G7_VARV|ASSEMBLY protein G7|Variola virus

Query: 1 DIWKMY 6
D W++Y
Sbjct: 90 DFWRLY 95


>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 DIWKMY 6
D W++Y
Sbjct: 90 DFWRLY 95


>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DIWKMY 6
D W++Y
Sbjct: 90 DFWRLY 95


>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)

Query: 1 DIWKMY 6
D W++Y
Sbjct: 90 DFWRLY 95


>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51

Query: 3 WKMYKQ 8
WK++KQ
Sbjct: 6 WKLWKQ 11


>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)

Query: 1 DIWKMY 6
D+WK Y
Sbjct: 1260 DLWKTY 1265


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 5 MYKQAQ 10
MYKQA+
Sbjct: 3999 MYKQAR 4004


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 5 MYKQAQ 10
MYKQA+
Sbjct: 3999 MYKQAR 4004


>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)

Query: 1 DIWKMY 6
D+WK Y
Sbjct: 1261 DLWKTY 1266


>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)

Query: 1 DIWKMY 6
D+WK Y
Sbjct: 1262 DLWKTY 1267


>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)

Query: 1 DIWKMY 6
D+WK Y
Sbjct: 1281 DLWKTY 1286


>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)

Query: 2 IWKMYK 7
IW++Y+
Sbjct: 116 IWELYR 121


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 DIWKMYKQA 9
DI++ +KQA
Sbjct: 1781 DIFENFKQA 1789


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 DIWKMYKQA 9
DI++ +KQA
Sbjct: 1779 DIFENFKQA 1787


>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1

Query: 3 WKMYKQA 9
W++ KQA
Sbjct: 1435 WRLLKQA 1441


>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)

Query: 1 DIWKMYKQ 8
+IW+ Y Q
Sbjct: 488 EIWERYNQ 495




12|Sequence|56|65|YKQAQASFWT

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 YKQAQASFWT 10
YK+A+ASFWT
Sbjct: 26 YKKAEASFWT 35


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 YKQAQASFWT 10
YK+A+ASFWT
Sbjct: 26 YKKAEASFWT 35


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 YKQAQASFWT 10
YK+A+ASFWT
Sbjct: 26 YKKAEASFWT 35


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 YKQAQASFWT 10
YK+A+ASFWT
Sbjct: 26 YKKAEASFWT 35


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 YKQAQASFWT 10
YK+A+ASFWT
Sbjct: 26 YKKAEASFWT 35


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 YKQAQASFWT 10
YK+A+ASFWT
Sbjct: 26 YKKAEASFWT 35


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 YKQAQASFWT 10
YK+A ASFWT
Sbjct: 30 YKKAVASFWT 39


>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)

Query: 1 YKQAQASFW 9
YK A FW
Sbjct: 479 YKDVLAKFW 487


>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)

Query: 1 YKQAQASFW 9
YK A FW
Sbjct: 479 YKDVLAKFW 487


>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)

Query: 1 YKQAQASFW 9
YK A FW
Sbjct: 482 YKDVLAKFW 490


>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)

Query: 1 YKQAQASFW 9
YK A FW
Sbjct: 482 YKDVLAKFW 490


>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)

Query: 1 YKQAQASFW 9
YK A FW
Sbjct: 482 YKDVLAKFW 490


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 1 YKQAQASFW 9
Y Q +FW
Sbjct: 2534 YSQYDETFW 2542




13|Sequence|61|70|ASFWTAEEVD

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 35 ASFWTVEEVD 44


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 31 ASFWTVEEVD 40


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 31 ASFWTVEEVD 40


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 31 ASFWTVEEVD 40


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 31 ASFWTVEEVD 40


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 31 ASFWTVEEVD 40


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 ASFWTAEEVD 10
ASFWT EEVD
Sbjct: 31 ASFWTVEEVD 40


>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)

Query: 1 ASFWTAEEVD 10
A+ +TAEE+D
Sbjct: 153 ATGFTAEELD 162


>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 4 WTAEEV 9
WT EEV
Sbjct: 9 WTVEEV 14


>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 WTAEEV 9
WT EEV
Sbjct: 9 WTVEEV 14


>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 WTAEEV 9
WT EEV
Sbjct: 9 WTVEEV 14


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 1 ASFWTA 6
+SFWT+
Sbjct: 879 SSFWTS 884


>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 FWTAEE 8
+WTA+E
Sbjct: 517 YWTAQE 522


>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3 FWTAEE 8
+WTA+E
Sbjct: 517 YWTAQE 522


>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)

Query: 3 FWTAEE 8
+WTA+E
Sbjct: 517 YWTAQE 522


>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)

Query: 2 SFWTAE 7
S+WT+E
Sbjct: 1085 SYWTSE 1090


>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 4 WTAEEVD 10
W A E+D
Sbjct: 36 WAANELD 42


>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)

Query: 4 WTAEE 8
WT+EE
Sbjct: 350 WTSEE 354




14|Sequence|66|75|AEEVDLSKDL

>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 2 EEVDLSKDL 10
EEVD+SKD+
Sbjct: 37 EEVDISKDI 45


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 2 EEVDLSKDL 10
EEVDLSKD
Sbjct: 41 EEVDLSKDF 49


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 EEVDLSKDL 10
EEVD+SKD+
Sbjct: 37 EEVDISKDI 45


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 EEVDLSKDL 10
EEVD+SKD+
Sbjct: 37 EEVDISKDI 45


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 2 EEVDLSKDL 10
EEVD+SKD+
Sbjct: 37 EEVDISKDI 45


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 2 EEVDLSKDL 10
EEVD+SKD+
Sbjct: 37 EEVDISKDI 45


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 2 EEVDLSKDL 10
EEVD+SKD+
Sbjct: 37 EEVDISKDI 45


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 2 EEVDLSKDL 10
E+ D+SKD+
Sbjct: 472 EDRDVSKDI 480




15|Sequence|71|80|LSKDLPHWNK

>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LSKDLPHWNK 10
+SKD+ WNK
Sbjct: 41 ISKDINDWNK 50


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 LSKDLPHWNK 10
+SKD+ WNK
Sbjct: 41 ISKDINDWNK 50


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 LSKDLPHWNK 10
+SKD+ WNK
Sbjct: 41 ISKDINDWNK 50


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 LSKDLPHWNK 10
+SKD+ WNK
Sbjct: 41 ISKDINDWNK 50


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 LSKDLPHWNK 10
+SKD+ WNK
Sbjct: 41 ISKDINDWNK 50


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LSKDLPHWNK 10
+SKD+ WNK
Sbjct: 41 ISKDINDWNK 50


>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain

Query: 6 PHWN 9
PHWN
Sbjct: 214 PHWN 217


>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)

Query: 6 PHWN 9
PHWN
Sbjct: 233 PHWN 236


>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB

Query: 6 PHWN 9
PHWN
Sbjct: 233 PHWN 236


>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep

Query: 6 PHWN 9
PHWN
Sbjct: 233 PHWN 236


>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi

Query: 6 PHWN 9
PHWN
Sbjct: 233 PHWN 236


>sp|VME1_CVHN5|MEMBRANE protein|Human coronavirus HKU1 (isolate N5)

Query: 5 LPHWN 9
PHWN
Sbjct: 6 FPHWN 10


>sp|VME1_CVHN2|MEMBRANE protein|Human coronavirus HKU1 (isolate N2)

Query: 5 LPHWN 9
PHWN
Sbjct: 6 FPHWN 10


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 6 PHWN 9
PHWN
Sbjct: 513 PHWN 516


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 6 PHWN 9
PHWN
Sbjct: 513 PHWN 516


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 6 PHWN 9
PHWN
Sbjct: 520 PHWN 523


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 6 PHWN 9
PHWN
Sbjct: 524 PHWN 527


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 6 PHWN 9
PHWN
Sbjct: 524 PHWN 527


>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 LSKDLP 6
LSKDLP
Sbjct: 1843 LSKDLP 1848


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 LSKDLP 6
LSKDLP
Sbjct: 1863 LSKDLP 1868


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 LSKDLP 6
LSKDLP
Sbjct: 1893 LSKDLP 1898


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 LSKDLP 6
LSKDLP
Sbjct: 1843 LSKDLP 1848


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 LSKDLP 6
LSKDLP
Sbjct: 1863 LSKDLP 1868


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 LSKDLP 6
LSKDLP
Sbjct: 1893 LSKDLP 1898


>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3175 VRKDIPQW 3182


>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3175 VRKDIPQW 3182


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 LSKDLPH 7
LS+DLP+
Sbjct: 474 LSRDLPY 480


>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3175 VRKDIPQW 3182


>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3175 VRKDIPQW 3182


>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3175 VRKDIPQW 3182


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3179 VRKDIPQW 3186


>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3179 VRKDIPQW 3186


>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3178 VRKDIPQW 3185


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3177 VRKDIPQW 3184


>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3177 VRKDIPQW 3184


>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3177 VRKDIPQW 3184


>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3177 VRKDIPQW 3184


>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3177 VRKDIPQW 3184


>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3

Query: 1 LSKDLPHWN 9
++K+LP+W
Sbjct: 677 VNKELPYWQ 685


>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain

Query: 1 LSKDLPH 7
LS+D PH
Sbjct: 1701 LSEDAPH 1707


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 1 LSKDLPHW 8
+ KD+P W
Sbjct: 3221 VRKDVPEW 3228


>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse

Query: 4 DLPHWN 9
D+P WN
Sbjct: 2215 DIPPWN 2220


>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United

Query: 4 DLPHWN 9
D+P WN
Sbjct: 2215 DIPPWN 2220


>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)

Query: 1 LSKDLPHWNK 10
L KDL H N+
Sbjct: 1620 LEKDLHHLNE 1629


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 LSKDLPHWNK 10
LSKD W K
Sbjct: 45 LSKDFSDWLK 54


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 SKDLPHW 8
+K+LP+W
Sbjct: 678 NKELPYW 684


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 2 SKDLPHW 8
+K+LP+W
Sbjct: 678 NKELPYW 684


>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1

Query: 5 LPHWNK 10
PHW K
Sbjct: 85 FPHWTK 90


>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3

Query: 1 LSKDLPH 7
L +DLPH
Sbjct: 648 LPQDLPH 654


>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20

Query: 3 KDLPHWN 9
KDL WN
Sbjct: 458 KDLNFWN 464


>sp|NCAP_CVH22|NUCLEOPROTEIN coronavirus 229E (HCoV-229E)

Query: 4 DLPHWNK 10
++PH+N+
Sbjct: 125 EIPHFNQ 131


>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)

Query: 1 LSKDLPH 7
L KD PH
Sbjct: 428 LGKDSPH 434


>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)

Query: 1 LSKDLPH 7
L KD PH
Sbjct: 423 LGKDSPH 429




16|Sequence|76|85|PHWNKLKADE

>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 WNKLKADE 10
WN +ADE
Sbjct: 579 WNVAEADE 586


>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 WNKLKADE 10
WN +ADE
Sbjct: 580 WNVAEADE 587


>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 3 WNKLKADE 10
WN +ADE
Sbjct: 258 WNVAEADE 265


>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus

Query: 3 WNKLK 7
WNK+K
Sbjct: 817 WNKIK 821


>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate

Query: 3 WNKLK 7
WNK+K
Sbjct: 817 WNKIK 821


>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 3 WNKLK 7
WNK+K
Sbjct: 817 WNKIK 821


>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)

Query: 3 WNKLK 7
WNK+K
Sbjct: 817 WNKIK 821


>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 WNKLK 7
WNK+K
Sbjct: 817 WNKIK 821


>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 1 PHWNKLKADE 10
P W L +DE
Sbjct: 89 PEWYDLLSDE 98


>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)

Query: 1 PHWNKLKADE 10
P W L +DE
Sbjct: 89 PEWYDLLSDE 98


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 3 WNKLKA 8
WN++KA
Sbjct: 317 WNQIKA 322


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 3 WNKLKA 8
WN++KA
Sbjct: 317 WNQIKA 322


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 3 WNKLKA 8
WN++KA
Sbjct: 317 WNQIKA 322


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 3 WNKLKA 8
W++LKA
Sbjct: 1547 WDRLKA 1552


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 3 WNKLKAD 9
WN +K D
Sbjct: 852 WNIIKCD 858




17|Sequence|81|90|LKADEKYFIS

>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 LKADEKYFI 9
L DEKYFI
Sbjct: 51 LTPDEKYFI 59


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LKADEKYFI 9
L DEKYFI
Sbjct: 51 LTPDEKYFI 59


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 LKADEKYFI 9
L DEKYFI
Sbjct: 51 LTPDEKYFI 59


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LKADEKYFI 9
L DEKYFI
Sbjct: 51 LTPDEKYFI 59


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 LKADEKYFI 9
L DEKYFI
Sbjct: 51 LTPDEKYFI 59


>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P

Query: 1 LKADEKYFIS 10
L ADE+ F+S
Sbjct: 14 LTADEEAFVS 23


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 LKADEKYFI 9
+ DEKYFI
Sbjct: 51 VTPDEKYFI 59


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2122 FRADEKY 2128


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2124 FRADEKY 2130


>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2126 FRADEKY 2132


>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2126 FRADEKY 2132


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2123 FRADEKY 2129


>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2131 FRADEKY 2137


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 1 LKADEKY 7
+ADEKY
Sbjct: 2123 FRADEKY 2129


>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996

Query: 1 LKADEKYFIS 10
+ ADE +F+S
Sbjct: 84 VDADEGHFVS 93


>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human

Query: 2 KADEKY 7
KADEK+
Sbjct: 61 KADEKF 66


>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 2 KADEKY 7
KADEK+
Sbjct: 61 KADEKF 66


>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human

Query: 2 KADEKY 7
KADEK+
Sbjct: 61 KADEKF 66


>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human

Query: 2 KADEKY 7
KADEK+
Sbjct: 61 KADEKF 66


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 2 KADEKYF 8
K+D KYF
Sbjct: 818 KSDYKYF 824


>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)

Query: 2 KADEKYFIS 10
KAD+ YF S
Sbjct: 110 KADDSYFQS 118


>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)

Query: 2 KADEKYFIS 10
KAD+ YF S
Sbjct: 110 KADDSYFQS 118


>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann

Query: 2 KADEKYFIS 10
KAD+ YF S
Sbjct: 110 KADDSYFQS 118


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 2 KADEKYF 8
++DEKY+
Sbjct: 1676 QSDEKYY 1682


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 2 KADEKYF 8
++DEKY+
Sbjct: 1676 QSDEKYY 1682


>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)

Query: 4 DEKYFIS 10
DE YF S
Sbjct: 254 DENYFAS 260


>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain

Query: 4 DEKYFIS 10
DE YF S
Sbjct: 254 DENYFAS 260


>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)

Query: 4 DEKYFIS 10
DE YF S
Sbjct: 254 DENYFAS 260


>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain

Query: 4 DEKYFIS 10
DE YF S
Sbjct: 254 DENYFAS 260


>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain

Query: 4 DEKYFIS 10
DE YF S
Sbjct: 254 DENYFAS 260


>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)

Query: 1 LKADEKYFI 9
+K DE Y I
Sbjct: 1392 VKCDETYII 1400


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 1 LKADEKYFI 9
LKA+EK ++
Sbjct: 1419 LKANEKLYL 1427


>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989

Query: 1 LKADEKYFIS 10
+ AD+ +F+S
Sbjct: 84 VDADDSHFVS 93


>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988

Query: 1 LKADEKYFIS 10
+ AD+ +F+S
Sbjct: 84 VDADDSHFVS 93


>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong

Query: 1 LKADEKYFIS 10
+ AD+ +F+S
Sbjct: 84 VDADDSHFVS 93




18|Sequence|86|95|KYFISHILAF

>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KYFISHILAF 10
KYFI H+LAF
Sbjct: 56 KYFIKHVLAF 65


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 KYFISHILAF 10
KYFI H+LAF
Sbjct: 56 KYFIKHVLAF 65


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KYFISHILAF 10
KYFI H+LAF
Sbjct: 56 KYFIKHVLAF 65


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 KYFISHILAF 10
KYFI H+LAF
Sbjct: 56 KYFIKHVLAF 65


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 KYFISHILAF 10
KYFI H+LAF
Sbjct: 56 KYFIKHVLAF 65


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 KYFISHILAF 10
KYFI H+LAF
Sbjct: 56 KYFIKHVLAF 65


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 KYFISHILAF 10
K FI HILAF
Sbjct: 60 KNFIKHILAF 69


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 1 KYFISHILA 9
+YFI+HI A
Sbjct: 851 QYFIAHIEA 859


>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain

Query: 2 YFISHI 7
YF+SHI
Sbjct: 208 YFMSHI 213


>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 YFISHILAF 10
YF+ LAF
Sbjct: 97 YFVRDCLAF 105


>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 YFISHILAF 10
YF+ LAF
Sbjct: 97 YFVRDCLAF 105


>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)

Query: 2 YFISHILAF 10
YF+ LAF
Sbjct: 97 YFVRDCLAF 105


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 2 YFISHIL 8
Y++SHI+
Sbjct: 326 YYLSHIV 332


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 1 KYFISHILAF 10
K+ H+L+F
Sbjct: 458 KFLDGHVLSF 467


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 2 YFISHILA 9
YF SH ++
Sbjct: 2330 YFASHFIS 2337


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 2 YFISHILA 9
YF SH ++
Sbjct: 2330 YFASHFIS 2337




19|Sequence|91|100|HILAFFAASD

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 HILAFFAASD 10
HILAFFAASD
Sbjct: 65 HILAFFAASD 74


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 HILAFFAASD 10
H+LAFFAASD
Sbjct: 61 HVLAFFAASD 70


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HILAFFAASD 10
H+LAFFAASD
Sbjct: 61 HVLAFFAASD 70


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 HILAFFAASD 10
H+LAFFAASD
Sbjct: 61 HVLAFFAASD 70


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 HILAFFAASD 10
H+LAFFAASD
Sbjct: 61 HVLAFFAASD 70


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 HILAFFAASD 10
H+LAFFAASD
Sbjct: 61 HVLAFFAASD 70


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 HILAFFAASD 10
H+LAFFAASD
Sbjct: 61 HVLAFFAASD 70


>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HILAFFAA 8
H++ FFAA
Sbjct: 180 HVVEFFAA 187


>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)

Query: 1 HILAFFAA 8
H++ FFAA
Sbjct: 180 HVVEFFAA 187


>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean

Query: 1 HILAFFAA 8
HI+ FF A
Sbjct: 207 HIVCFFVA 214


>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee

Query: 1 HILAFFAA 8
HI+ FF A
Sbjct: 207 HIVCFFVA 214


>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo

Query: 1 HILAFFAA 8
HI+ FF A
Sbjct: 207 HIVCFFVA 214


>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 HILAFFA 7
H+L+F+A
Sbjct: 165 HVLSFYA 171


>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)

Query: 5 FFAASD 10
+FAASD
Sbjct: 1011 YFAASD 1016


>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)

Query: 1 HILAFFA 7
H+L+F+A
Sbjct: 165 HVLSFYA 171


>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)

Query: 1 HILAFFA 7
H L FFA
Sbjct: 93 HALTFFA 99


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 2 ILAFFAASD 10
+LA +AA D
Sbjct: 199 VLAIYAAKD 207


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 2 ILAFFAASD 10
+LA +AA D
Sbjct: 195 VLAVYAAKD 203


>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 HILAFFA 7
H++ FFA
Sbjct: 569 HLILFFA 575




20|Sequence|96|105|FAASDGIVNE

>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 66 FAASDGIVNE 75


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 66 FAASDGIVNE 75


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 66 FAASDGIVNE 75


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 66 FAASDGIVNE 75


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 70 FAASDGIVNE 79


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 66 FAASDGIVNE 75


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FAASDGIVNE 10
FAASDGIVNE
Sbjct: 66 FAASDGIVNE 75


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 1 FAASDGIVN 9
FAAS G+++
Sbjct: 371 FAASTGVID 379


>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)

Query: 1 FAASDGIVN 9
FAAS G+++
Sbjct: 371 FAASTGVID 379


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 1 FAASDGIVN 9
+ +DG+VN
Sbjct: 1241 YGTADGMVN 1249


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 1 FAASDGIVN 9
+ +DG+VN
Sbjct: 1241 YGTADGMVN 1249




21|Sequence|101|110|GIVNENLVER

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 71 GIVNENLAER 80


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 71 GIVNENLAER 80


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 71 GIVNENLAER 80


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 71 GIVNENLAER 80


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 71 GIVNENLAER 80


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 71 GIVNENLAER 80


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 GIVNENLVER 10
GIVNENL ER
Sbjct: 75 GIVNENLAER 84


>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 VNENLVER 10
+N+NL+ER
Sbjct: 530 LNQNLLER 537


>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 VNENLVER 10
+N+NL+ER
Sbjct: 530 LNQNLLER 537


>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 VNENLVER 10
+N+NL+ER
Sbjct: 530 LNQNLLER 537


>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus

Query: 1 GIVNENL 7
GI+N+NL
Sbjct: 221 GIINDNL 227


>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 GIVNENLVER 10
G NENL+++
Sbjct: 136 GTTNENLMKK 145


>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain

Query: 1 GIVNENLVER 10
G+V NLV R
Sbjct: 34 GVVQLNLVNR 43


>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1360 GLVRKNLVQ 1368


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1524 GLVRKNLVQ 1532


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 1 GIVNENLVE 9
G+V +NLV+
Sbjct: 1526 GLVRKNLVQ 1534




22|Sequence|106|115|NLVERFSQEV

>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)

Query: 1 NLVERFSQEV 10
+L+ +FSQEV
Sbjct: 571 SLMSQFSQEV 580


>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)

Query: 1 NLVERFSQEV 10
+L+ +FSQEV
Sbjct: 571 SLMSQFSQEV 580


>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)

Query: 1 NLVERFSQEV 10
+L+ +FSQEV
Sbjct: 571 SLMSQFSQEV 580


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 NLVERFSQEV 10
+L+ +FSQEV
Sbjct: 571 SLMSQFSQEV 580


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 NLVERFSQEV 10
+L+ +FSQEV
Sbjct: 571 SLMSQFSQEV 580


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 NLVERFSQEV 10
+L+ +FSQEV
Sbjct: 571 SLMSQFSQEV 580


>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P

Query: 1 NLVERFSQ 8
NLVER+++
Sbjct: 2537 NLVERYAR 2544


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NLV+ +SQE+
Sbjct: 784 NLVQYWSQEL 793


>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain

Query: 1 NLVERFSQEV 10
NL+E+F ++
Sbjct: 339 NLIEKFGSDI 348


>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)

Query: 2 LVERFSQ 8
+VERF Q
Sbjct: 123 IVERFKQ 129


>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 798 NLLQYWSQEL 807


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 810 NLLQYWSQEL 819


>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 798 NLLQYWSQEL 807


>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 807 NLLQYWSQEL 816


>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 803 NLLQYWSQEL 812


>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 809 NLLQYWSQEL 818


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 794 NLLQYWSQEL 803


>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 798 NLLQYWSQEL 807


>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 793 NLLQYWSQEL 802


>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 798 NLLQYWSQEL 807


>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 788 NLLQYWSQEL 797


>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 798 NLLQYWSQEL 807


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 795 NLLQYWSQEL 804


>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 798 NLLQYWSQEL 807


>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 797 NLLQYWSQEL 806


>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 796 NLLQYWSQEL 805


>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 803 NLLQYWSQEL 812


>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 795 NLLQYWSQEL 804


>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22

Query: 3 VERFSQE 9
+ER SQE
Sbjct: 249 IERISQE 255


>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 NLVERFSQEV 10
NL++ +SQE+
Sbjct: 790 NLLQYWSQEL 799


>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23

Query: 3 VERFSQE 9
+ER SQE
Sbjct: 246 IERISQE 252




23|Sequence|111|120|FSQEVQVPEA

>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)

Query: 1 FSQEVQVPE 9
F QE VPE
Sbjct: 456 FEQEFSVPE 464


>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23

Query: 1 FSQEVQVPEA 10
F+QE++VP +
Sbjct: 131 FTQELEVPAS 140


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2 SQEVQVPEA 10
S+E Q+PE
Sbjct: 1829 SEERQIPEG 1837


>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b

Query: 2 SQEVQVPEA 10
+QEV +PE+
Sbjct: 203 TQEVSIPES 211


>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a

Query: 2 SQEVQVPEA 10
+QEV +PE+
Sbjct: 203 TQEVSIPES 211


>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)

Query: 1 FSQEVQVPE 9
++QEV PE
Sbjct: 186 YTQEVTPPE 194


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 4 EVQVPE 9
EV+VPE
Sbjct: 1839 EVEVPE 1844


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 4 EVQVPE 9
EV+VPE
Sbjct: 1839 EVEVPE 1844


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 4 EVQVPE 9
EV+VPE
Sbjct: 1835 EVEVPE 1840




24|Sequence|116|125|QVPEARCFYG

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 90 QISEARCFYG 99


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 86 QITEARCFYG 95


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 86 QITEARCFYG 95


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 86 QITEARCFYG 95


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 86 QITEARCFYG 95


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 86 QITEARCFYG 95


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 QVPEARCFYG 10
Q+ EARCFYG
Sbjct: 86 QITEARCFYG 95


>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)

Query: 3 PEARCF 8
PE+RCF
Sbjct: 966 PESRCF 971


>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)

Query: 3 PEARCF 8
PE+RCF
Sbjct: 963 PESRCF 968


>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)

Query: 3 PEARCFYG 10
PE+RCF G
Sbjct: 50 PESRCFPG 57


>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b

Query: 1 QVPEARCF 8
Q P RCF
Sbjct: 103 QTPPKRCF 110


>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a

Query: 1 QVPEARCF 8
Q P RCF
Sbjct: 103 QTPPKRCF 110


>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 1 QVPEARCFYG 10
++P AR F G
Sbjct: 536 EMPNARAFVG 545


>sp|E4RF2_ADE02|EARLY 4 ORF2 protein|Human adenovirus C serotype 2

Query: 2 VPEARCFY 9
VPE C Y
Sbjct: 13 VPELTCLY 20


>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1086 PELECFF 1092


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1085 PELECFF 1091


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1085 PELECFF 1091


>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1086 PELECFF 1092


>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1086 PELECFF 1092


>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P

Query: 3 PEARCFY 9
PE R FY
Sbjct: 166 PEYRVFY 172


>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 QVPEARC 7
Q PEA C
Sbjct: 522 QAPEAHC 528


>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 QVPEARC 7
Q PEA C
Sbjct: 522 QAPEAHC 528


>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 QVPEARC 7
Q PEA C
Sbjct: 522 QAPEAHC 528


>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41

Query: 4 EARCFY 9
EARC Y
Sbjct: 27 EARCSY 32


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1085 PELDCFF 1091


>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1085 PELDCFF 1091


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1085 PELDCFF 1091


>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava

Query: 3 PEARCFY 9
PE CF+
Sbjct: 1085 PELDCFF 1091


>sp|VE4_HPV54|PROTEIN E4|Human papillomavirus type 54

Query: 1 QVPEARCFY 9
QVP+ C Y
Sbjct: 5 QVPKRHCQY 13


>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)

Query: 6 RCFYG 10
RCF+G
Sbjct: 22 RCFHG 26


>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 6 RCFY 9
RCFY
Sbjct: 149 RCFY 152


>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41

Query: 6 RCFYG 10
RCF+G
Sbjct: 230 RCFHG 234


>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain

Query: 6 RCFY 9
RCFY
Sbjct: 149 RCFY 152


>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P

Query: 2 VPEARC 7
VP+A+C
Sbjct: 627 VPDAQC 632




25|Sequence|121|130|RCFYGFQILI

>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RCFYGFQILI 10
RCFYGFQ+ I
Sbjct: 91 RCFYGFQMAI 100


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 RCFYGFQILI 10
RCFYGFQ+ I
Sbjct: 91 RCFYGFQMAI 100


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 RCFYGFQILI 10
RCFYGFQ+ I
Sbjct: 91 RCFYGFQMAI 100


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 RCFYGFQILI 10
RCFYGFQ+ I
Sbjct: 91 RCFYGFQMAI 100


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RCFYGFQILI 10
RCFYGFQ+ I
Sbjct: 91 RCFYGFQMAI 100


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 RCFYGFQI 8
RCFYGFQI
Sbjct: 95 RCFYGFQI 102


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 RCFYGFQILI 10
RCFYGF++ I
Sbjct: 91 RCFYGFRMAI 100


>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P

Query: 2 CFYGF-QILI 10
CF+GF QI I
Sbjct: 129 CFFGFYQIFI 138


>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 CFYGFQ 7
C+YGF+
Sbjct: 908 CYYGFK 913


>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 CFYGFQ 7
C+YGF+
Sbjct: 908 CYYGFK 913


>sp|K6_HHV8P|PROTEIN K6|Human herpesvirus 8 type P

Query: 2 CFYGFQ 7
C YGFQ
Sbjct: 36 CCYGFQ 41


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 2 CFYGFQILI 10
C+ GF+ LI
Sbjct: 478 CYTGFRSLI 486


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 CFYGFQILI 10
C+ GF+ LI
Sbjct: 478 CYTGFRSLI 486


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 CFYGFQILI 10
C+ GF+ LI
Sbjct: 478 CYTGFRSLI 486


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 2 CFYGFQILI 10
C+ GF+ LI
Sbjct: 478 CYTGFRSLI 486


>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 CFYGFQ 7
CF GFQ
Sbjct: 337 CFLGFQ 342


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 RCFYGFQILI 10
RC + FQ+ I
Sbjct: 165 RCGFHFQVQI 174


>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus

Query: 2 CFYGFQILI 10
CF F ILI
Sbjct: 1292 CFVLFMILI 1300


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 RCFYGFQI 8
RCF F+I
Sbjct: 20 RCFPHFEI 27


>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United

Query: 3 FYGFQIL 9
FYGF+ L
Sbjct: 153 FYGFRKL 159


>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)

Query: 2 CFYGFQI 8
C Y FQ+
Sbjct: 65 CLYFFQV 71


>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)

Query: 2 CFYGFQI 8
C Y FQ+
Sbjct: 65 CLYFFQV 71


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 1 RCFYGFQILI 10
RC + FQ+ +
Sbjct: 164 RCGFHFQVQV 173


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 1 RCFYGFQILI 10
RC + FQ+ +
Sbjct: 164 RCGFHFQVQV 173


>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)

Query: 2 CFYGF 6
CFY F
Sbjct: 717 CFYNF 721


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 CFYGFQIL 9
C +G+Q L
Sbjct: 2048 CLFGYQEL 2055


>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)

Query: 2 CFYGFQIL 9
C +G+Q L
Sbjct: 2048 CLFGYQEL 2055




26|Sequence|126|135|FQILIENVHS

>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FQILIENVHS 10
FQ+ IEN+HS
Sbjct: 96 FQMAIENIHS 105


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FQILIENVHS 10
FQ+ IEN+HS
Sbjct: 96 FQMAIENIHS 105


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FQILIENVHS 10
FQ+ IEN+HS
Sbjct: 96 FQMAIENIHS 105


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 FQILIENVHS 10
FQI +EN+HS
Sbjct: 100 FQIAMENIHS 109


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 FQILIENVHS 10
FQ+ IEN+HS
Sbjct: 96 FQMAIENIHS 105


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 FQILIENVHS 10
FQ+ IEN+HS
Sbjct: 96 FQMAIENIHS 105


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FQILIENVHS 10
F++ IEN+HS
Sbjct: 96 FRMAIENIHS 105


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 1 FQILIEN 7
F++LIEN
Sbjct: 2082 FEVLIEN 2088


>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 2 QILIEN 7
QILIEN
Sbjct: 568 QILIEN 573


>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 2 QILIEN 7
QILIEN
Sbjct: 568 QILIEN 573


>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2

Query: 2 QILIEN 7
QILIEN
Sbjct: 567 QILIEN 572


>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4

Query: 2 QILIEN 7
QILIEN
Sbjct: 566 QILIEN 571


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 1 FQILIENV 8
F+ILIE V
Sbjct: 535 FRILIEKV 542


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 1 FQILIENV 8
F+ILIE V
Sbjct: 535 FRILIEKV 542


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 1 FQILIENV 8
F+ILIE V
Sbjct: 535 FRILIEKV 542


>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)

Query: 1 FQILIENVH 9
FQI EN H
Sbjct: 81 FQIKFENPH 89


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 1 FQILIENV 8
F+IL+E V
Sbjct: 535 FRILVEKV 542


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 2 QILIENVH 9
Q+ +EN+H
Sbjct: 90 QVAMENIH 97




27|Sequence|131|140|ENVHSEMYSL

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 105 ENIHSEMYSL 114


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 101 ENIHSEMYSL 110


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 101 ENIHSEMYSL 110


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 101 ENIHSEMYSL 110


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 101 ENIHSEMYSL 110


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 101 ENIHSEMYSL 110


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 ENVHSEMYSL 10
EN+HSEMYSL
Sbjct: 101 ENIHSEMYSL 110


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 ENVHSEMYS 9
ENVH E Y+
Sbjct: 91 ENVHGETYA 99


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 ENVHSEMYS 9
ENVH E Y+
Sbjct: 91 ENVHGETYA 99


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 ENVHSEMYS 9
ENVH E Y+
Sbjct: 91 ENVHGETYA 99


>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)

Query: 2 NVHSEMYSL 10
+VH+EM+ L
Sbjct: 595 HVHTEMHRL 603


>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 ENVHSEMY 8
ENV EMY
Sbjct: 353 ENVDDEMY 360


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 ENVHSEMYSL 10
+ HS +YSL
Sbjct: 1259 DKYHSSVYSL 1268


>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)

Query: 1 ENVHSEMYSL 10
+ HS +YSL
Sbjct: 1259 DKYHSSVYSL 1268


>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)

Query: 1 ENVHSEMYSL 10
+ HS +YSL
Sbjct: 1259 DKYHSSVYSL 1268


>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)

Query: 2 NVHSEMYSL 10
+VH+EM+ +
Sbjct: 595 HVHTEMHRI 603


>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)

Query: 1 ENVHSEMYSL 10
+ HS +YSL
Sbjct: 1259 DKYHSSVYSL 1268


>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 NVHSEMYS 9
N H+E+Y+
Sbjct: 447 NAHTEIYN 454


>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare

Query: 1 ENVHSEM 7
EN+H E+
Sbjct: 1277 ENIHCEL 1283


>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United

Query: 1 ENVHSEM 7
EN+H E+
Sbjct: 1277 ENIHCEL 1283


>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus

Query: 3 VHSEMYSL 10
VH + YSL
Sbjct: 252 VHGDTYSL 259


>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)

Query: 3 VHSEMYSL 10
VH + YSL
Sbjct: 252 VHGDTYSL 259


>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 VHSEMYSL 10
VH + YSL
Sbjct: 252 VHGDTYSL 259


>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)

Query: 3 VHSEMYSL 10
VH + YSL
Sbjct: 252 VHGDTYSL 259




28|Sequence|136|145|EMYSLLIDTY

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 106 EMYSLLIDTY 115


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 106 EMYSLLIDTY 115


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 106 EMYSLLIDTY 115


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 106 EMYSLLIDTY 115


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 106 EMYSLLIDTY 115


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 110 EMYSLLIDTY 119


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 EMYSLLIDTY 10
EMYSLLIDTY
Sbjct: 106 EMYSLLIDTY 115


>sp|PG053_VARV|EFC-ASSOCIATED protein OPG053|Variola virus

Query: 2 MYSLLIDTY 10
+Y+L ID+Y
Sbjct: 10 LYNLFIDSY 18


>sp|PG053_VAR67|EFC-ASSOCIATED protein OPG053|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 MYSLLIDTY 10
+Y+L ID+Y
Sbjct: 10 LYNLFIDSY 18


>sp|PG053_MONPV|EFC-ASSOCIATED protein OPG053|Monkeypox virus (MPXV)

Query: 2 MYSLLIDTY 10
+Y+L ID+Y
Sbjct: 10 LYNLFIDSY 18


>sp|PG053_VACCP|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 MYSLLIDTY 10
+Y+L ID+Y
Sbjct: 10 LYNLFIDSY 18


>sp|PG053_VACCC|EFC-ASSOCIATED protein OPG053|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 MYSLLIDTY 10
+Y+L ID+Y
Sbjct: 10 LYNLFIDSY 18


>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1

Query: 2 MYSLLIDTY 10
+YSLL+ Y
Sbjct: 70 LYSLLVAYY 78


>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 EMYSLLIDT 9
+ Y+L++DT
Sbjct: 12 QSYNLIVDT 20




29|Sequence|141|150|LIDTYIRDPK

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 LIDTYIRDPK 10
LIDTYI D K
Sbjct: 115 LIDTYILDSK 124


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 LIDTYIRD 8
LIDTY++D
Sbjct: 111 LIDTYVKD 118


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LIDTYIRD 8
LIDTY++D
Sbjct: 111 LIDTYVKD 118


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 LIDTYIRD 8
LIDTY++D
Sbjct: 111 LIDTYVKD 118


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 LIDTYIRD 8
LIDTY++D
Sbjct: 111 LIDTYVKD 118


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 LIDTYIRD 8
LIDTY++D
Sbjct: 111 LIDTYVKD 118


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LIDTYIRD 8
LIDTY++D
Sbjct: 111 LIDTYVKD 118


>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus

Query: 2 IDTYIRDPK 10
+D YIR P+
Sbjct: 179 LDVYIRTPR 187


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 1 LIDTYIRDP 9
+I+T +RDP
Sbjct: 732 VIETLVRDP 740


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 1 LIDTYIRDP 9
+I+T +RDP
Sbjct: 731 VIETLVRDP 739


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 1 LIDTYIRDP 9
+I+T +RDP
Sbjct: 731 VIETLVRDP 739


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 487 IDTYLRN 493


>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 564 IDTYLRN 570


>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 542 IDTYLRN 548


>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 545 IDTYLRN 551


>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1

Query: 1 LIDTYIRDP 9
LID Y R P
Sbjct: 462 LIDKYFRHP 470


>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 526 IDTYLRN 532


>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 492 IDTYLRN 498


>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57

Query: 2 IDTYIRD 8
IDTY+R+
Sbjct: 526 IDTYLRN 532


>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72

Query: 2 IDTYIR 7
IDTY+R
Sbjct: 531 IDTYLR 536


>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61

Query: 2 IDTYIR 7
IDTY+R
Sbjct: 531 IDTYLR 536


>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)

Query: 4 TYIRDP 9
TYIR+P
Sbjct: 340 TYIRNP 345


>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 543 VDTYLRN 549


>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 275 IDTYIND 281


>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)

Query: 2 IDTYIRD 8
IDTYI D
Sbjct: 283 IDTYIND 289


>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate

Query: 2 IDTYIRDP 9
+ TYI++P
Sbjct: 431 VKTYIKEP 438


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 525 LDTYLRN 531


>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 DTYIRDPK 10
D Y+ DPK
Sbjct: 306 DWYLFDPK 313


>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 DTYIRDPK 10
D Y+ DPK
Sbjct: 306 DWYLFDPK 313


>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 DTYIRDPK 10
D Y+ DPK
Sbjct: 306 DWYLFDPK 313


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 487 MDTYLRN 493


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 487 MDTYLRN 493


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 486 MDTYLRN 492


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 488 MDTYLRN 494


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 487 MDTYLRN 493


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 488 MDTYLRN 494


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 489 MDTYLRN 495


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 489 MDTYLRN 495


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 490 MDTYLRN 496


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 2 IDTYIRDPK 10
+DT + DP+
Sbjct: 2880 VDTRVPDPQ 2888


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 2 IDTYIRDPK 10
+DT + DP+
Sbjct: 2880 VDTRVPDPQ 2888


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 IDTYIRDPK 10
+DT + DP+
Sbjct: 2876 VDTRVPDPQ 2884


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 2 IDTYIRD 8
+DTY+R+
Sbjct: 477 LDTYLRN 483


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 5 YIRDPK 10
Y+RDP+
Sbjct: 540 YLRDPE 545


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 4 TYIRDP 9
TY+ DP
Sbjct: 6393 TYLNDP 6398


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 5 YIRDPK 10
Y+RDP+
Sbjct: 540 YLRDPE 545


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 5 YIRDPK 10
Y+RDP+
Sbjct: 540 YLRDPE 545


>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1

Query: 4 TYIRDPK 10
TY+ DP+
Sbjct: 554 TYLEDPR 560


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 4 TYIRDPK 10
TY+ DP+
Sbjct: 554 TYLEDPR 560


>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)

Query: 1 LIDTYIRDPK 10
+ID+ I+D K
Sbjct: 131 IIDSIIKDGK 140


>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 LIDTYIRDPK 10
+ID+ I+D K
Sbjct: 129 IIDSIIKDGK 138


>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate

Query: 1 LIDTYIRDP 9
L+D+Y++ P
Sbjct: 568 LMDSYVQIP 576


>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31

Query: 1 LIDTYI 6
L+DTY+
Sbjct: 382 LVDTYV 387


>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 LIDTYIRDP 9
L+D+Y++ P
Sbjct: 568 LMDSYVQIP 576


>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 LIDTYIRDP 9
L+D+Y++ P
Sbjct: 568 LMDSYVQIP 576


>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United

Query: 1 LIDTYIRDP 9
L+D+Y++ P
Sbjct: 568 LMDSYVQIP 576


>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 LIDTYIRDP 9
L+D+Y++ P
Sbjct: 568 LMDSYVQIP 576


>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12

Query: 1 LIDTYI 6
L+DTY+
Sbjct: 480 LVDTYV 485


>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain

Query: 1 LIDTYIRDP 9
L+D+Y++ P
Sbjct: 568 LMDSYVQIP 576




30|Sequence|146|155|IRDPKKREFL

>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus

Query: 1 IRDPKKREFL 10
+RDPK E L
Sbjct: 562 VRDPKTSEIL 571


>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 IRDPKKREF 9
IRD +K+E+
Sbjct: 166 IRDKQKKEY 174


>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)

Query: 1 IRDPKKREFL 10
I+ PK +EFL
Sbjct: 343 IQYPKMKEFL 352


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 2 RDPKKREFL 10
R+P R+FL
Sbjct: 312 REPPNRDFL 320


>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)

Query: 1 IRDPKKRE 8
+RD KK+E
Sbjct: 506 VRDKKKKE 513


>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 1 IRDPKKRE 8
I+D KK+E
Sbjct: 163 IKDKKKKE 170


>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 PKKREFL 10
PK +EFL
Sbjct: 346 PKMKEFL 352


>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)

Query: 4 PKKREFL 10
PK +EFL
Sbjct: 346 PKMKEFL 352


>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)

Query: 1 IRDPKKRE 8
+RD KK+E
Sbjct: 506 VRDKKKKE 513


>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)

Query: 3 DPKKREFL 10
DP RE+L
Sbjct: 2095 DPLTREYL 2102


>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus

Query: 3 DPKKREFL 10
DP RE+L
Sbjct: 2093 DPLTREYL 2100


>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain

Query: 2 RDPKKREFL 10
+ PK REF+
Sbjct: 344 KKPKSREFV 352


>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka

Query: 2 RDPKKREFL 10
+ PK REF+
Sbjct: 344 KKPKSREFV 352


>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain

Query: 2 RDPKKR 7
RDPK+R
Sbjct: 116 RDPKQR 121


>sp|ICP27_HHV6Z|MRNA export factor ICP27 homolog|Human herpesvirus 6B (strain Z29)

Query: 2 RDPKKR 7
RDPK+R
Sbjct: 117 RDPKQR 122


>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)

Query: 3 DPKKREFL 10
DP +++FL
Sbjct: 513 DPARKQFL 520


>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain

Query: 1 IRDPKKREFL 10
I K+REFL
Sbjct: 209 ISHEKRREFL 218


>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)

Query: 1 IRDPKKREFL 10
I K+REFL
Sbjct: 209 ISHEKRREFL 218


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 3 DPKKREF 9
DPK EF
Sbjct: 802 DPKMHEF 808




31|Sequence|151|160|KREFLFNAIE

>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 121 EKNYLFNAIE 130


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 121 EKNYLFNAIE 130


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 121 EKNYLFNAIE 130


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 121 EKNYLFNAIE 130


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 121 EKNYLFNAIE 130


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 121 EKNYLFNAIE 130


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 KREFLFNAIE 10
++ +LFNAIE
Sbjct: 125 EKNYLFNAIE 134


>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P

Query: 1 KREFLFNAIE 10
KREF+ +A+E
Sbjct: 7 KREFIKSALE 16


>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)

Query: 1 KREFLFNAI 9
KRE LFN +
Sbjct: 1171 KREQLFNNV 1179


>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)

Query: 1 KREFLFNAI 9
KRE LFN +
Sbjct: 1172 KREQLFNNV 1180


>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 KREFLFN 7
KR+ LFN
Sbjct: 363 KRDILFN 369


>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 KREFLFN 7
KR+ LFN
Sbjct: 363 KRDILFN 369


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 1 KREFLFNAI 9
K+E +F+A+
Sbjct: 324 KKEIIFDAV 332




32|Sequence|156|165|FNAIETMPYV

>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FNAIETMPYV 10
FNAIETMP V
Sbjct: 126 FNAIETMPCV 135


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 FNAIETMPYV 10
FNAIETMP V
Sbjct: 126 FNAIETMPCV 135


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FNAIETMPYV 10
FNAIETMP V
Sbjct: 126 FNAIETMPCV 135


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FNAIETMPYV 10
FNAIETMP V
Sbjct: 126 FNAIETMPCV 135


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 FNAIETMPYV 10
FNAIETMP V
Sbjct: 126 FNAIETMPCV 135


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FNAIETMPYV 10
FNAIETMP V
Sbjct: 126 FNAIETMPCV 135




33|Sequence|161|170|TMPYVKKKAD

>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 TMPYVKKKAD 10
TMP VKKKAD
Sbjct: 131 TMPCVKKKAD 140


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 TMPYVKKKAD 10
TMP VKKKAD
Sbjct: 131 TMPCVKKKAD 140


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 TMPYVKKKAD 10
TMP VKKKAD
Sbjct: 131 TMPCVKKKAD 140


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 TMPYVKKKAD 10
TMP VKKKAD
Sbjct: 131 TMPCVKKKAD 140


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 TMPYVKKKAD 10
TMP VKKKAD
Sbjct: 131 TMPCVKKKAD 140


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 TMPYVKKKAD 10
TMP VKKKAD
Sbjct: 131 TMPCVKKKAD 140


>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 TMPYVKKKA 9
TM YV+K A
Sbjct: 215 TMTYVRKLA 223


>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 TMPYVKKKA 9
TM YV+K A
Sbjct: 215 TMTYVRKLA 223


>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United

Query: 3 PYVKKKAD 10
PYV K+A+
Sbjct: 1241 PYVYKRAN 1248


>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain

Query: 2 MPYVKKKAD 10
+PY+ K D
Sbjct: 1220 VPYIGSKTD 1228


>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain

Query: 2 MPYVKKKAD 10
+PY+ K D
Sbjct: 1220 VPYIGSKTD 1228


>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain

Query: 2 MPYVKKKAD 10
+PY+ K D
Sbjct: 1220 VPYIGSKTD 1228


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 3 PYVKKKAD 10
P+V+++AD
Sbjct: 561 PFVEQEAD 568


>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 MPYVKKKAD 10
MPY K AD
Sbjct: 262 MPYFKICAD 270


>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)

Query: 4 YVKKKAD 10
YV+K+AD
Sbjct: 45 YVEKEAD 51




34|Sequence|166|175|KKKADWALRW

>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 KKKADWALRW 10
KKKADWA +W
Sbjct: 136 KKKADWAQKW 145


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KKKADWALRW 10
KKKADWA +W
Sbjct: 136 KKKADWAQKW 145


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KKKADWALRW 10
KKKADWA +W
Sbjct: 136 KKKADWAQKW 145


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 KKKADWALRW 10
KKKADWA +W
Sbjct: 136 KKKADWAQKW 145


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 KKKADWALRW 10
KKKADWA +W
Sbjct: 136 KKKADWAQKW 145


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 KKKADWALRW 10
KKKADWA +W
Sbjct: 136 KKKADWAQKW 145


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 KKKADWALRW 10
K+KA+WA +W
Sbjct: 140 KQKANWAKKW 149


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 4 ADWALRW 10
A WA++W
Sbjct: 710 ASWAIKW 716


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4 ADWALRW 10
A WA++W
Sbjct: 710 ASWAIKW 716


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 4 ADWALRW 10
A WA++W
Sbjct: 710 ASWAIKW 716


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 6 WALRW 10
WA+RW
Sbjct: 712 WAIRW 716


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 6 WALRW 10
WA+RW
Sbjct: 710 WAVRW 714


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 6 WALRW 10
WAL+W
Sbjct: 720 WALKW 724


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 6 WALRW 10
WAL+W
Sbjct: 712 WALKW 716


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 6 WALRW 10
WAL+W
Sbjct: 718 WALKW 722


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 6 WALRW 10
WAL+W
Sbjct: 718 WALKW 722


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 1 KKKADWALRW 10
K + WA+ W
Sbjct: 138 KSDSSWAIHW 147


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 4 ADWALRW 10
A WA++W
Sbjct: 710 ASWAIKW 716


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 5 DWALRW 10
+WA++W
Sbjct: 715 NWAIKW 720


>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2

Query: 1 KKKADWALRW 10
+ K +W L W
Sbjct: 912 QPKQNWPLAW 921


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 6 WALRW 10
WA++W
Sbjct: 713 WAMKW 717


>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain

Query: 3 KADWALRW 10
+ +W+L W
Sbjct: 171 RREWSLSW 178


>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)

Query: 3 KADWALRW 10
+ +W+L W
Sbjct: 171 RREWSLSW 178


>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain

Query: 3 KADWALRW 10
+ +W+L W
Sbjct: 171 RREWSLSW 178


>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain

Query: 3 KADWALRW 10
+ +W+L W
Sbjct: 171 RREWSLSW 178


>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)

Query: 3 KADWALRW 10
+ +W+L W
Sbjct: 171 RREWSLSW 178


>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)

Query: 3 KADWALRW 10
+ +W+L W
Sbjct: 171 RREWSLSW 178


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 6 WALRW 10
WA++W
Sbjct: 717 WAIKW 721


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 6 WALRW 10
WA++W
Sbjct: 714 WAVKW 718


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 6 WALRW 10
WA++W
Sbjct: 717 WAVKW 721


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 6 WALRW 10
WA++W
Sbjct: 713 WAVKW 717


>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 6 WALRW 10
WA++W
Sbjct: 713 WAVKW 717


>sp|CAPSD_SOUV3|CAPSID protein VP1|Southampton virus (strain GI/Human/United

Query: 3 KADWALR 9
K DW +R
Sbjct: 328 KCDWHMR 334


>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain

Query: 2 KKADWAL 8
K+A W+L
Sbjct: 343 KRAQWSL 349


>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain

Query: 2 KKADWAL 8
K+A W+L
Sbjct: 343 KRAQWSL 349


>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate

Query: 5 DWALRW 10
DW L W
Sbjct: 137 DWILGW 142




35|Sequence|171|180|WALRWIADRK

>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 WALRWIAD 8
WALR IAD
Sbjct: 438 WALRQIAD 445


>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 WALRWIAD 8
WALR IAD
Sbjct: 438 WALRQIAD 445


>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 WALRWIAD 8
WALR IAD
Sbjct: 439 WALRQIAD 446


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 WALRWIAD 8
WA +WI D
Sbjct: 141 WAQKWIHD 148


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 WALRWIAD 8
WA +WI D
Sbjct: 141 WAQKWIHD 148


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 WALRWIAD 8
WA +WI D
Sbjct: 141 WAQKWIHD 148


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 WALRWIAD 8
WA +WI D
Sbjct: 141 WAQKWIHD 148


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 WALRWIAD 8
WA +WI D
Sbjct: 141 WAQKWIHD 148


>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain

Query: 1 WALRWIADR 9
W++ W+ D+
Sbjct: 178 WSIAWVGDQ 186


>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)

Query: 1 WALRWIADR 9
W++ W+ D+
Sbjct: 178 WSIAWVGDQ 186


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 WALRWIAD 8
WA +WI D
Sbjct: 141 WAQKWIHD 148


>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain

Query: 2 ALRWIADRK 10
L+W ADR+
Sbjct: 1016 GLKWAADRE 1024


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 1 WALRW 5
WA+RW
Sbjct: 712 WAIRW 716


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 1 WALRW 5
WA+RW
Sbjct: 710 WAVRW 714


>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P

Query: 1 WALRWIAD 8
WA WI D
Sbjct: 9 WATLWIID 16


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 4 RWIADRK 10
RW DRK
Sbjct: 596 RWTTDRK 602


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 4 RWIADRK 10
RW DRK
Sbjct: 596 RWTTDRK 602


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 4 RWIADRK 10
RW DRK
Sbjct: 596 RWTTDRK 602


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 WALRWIADR 9
WA +WI +
Sbjct: 145 WAKKWIESK 153


>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain

Query: 1 WALRWIAD 8
WAL IAD
Sbjct: 302 WALHPIAD 309


>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain

Query: 1 WALRWIAD 8
WAL IAD
Sbjct: 302 WALHPIAD 309


>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain

Query: 1 WALRWI 6
W+L W+
Sbjct: 174 WSLSWV 179


>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)

Query: 1 WALRWI 6
W+L W+
Sbjct: 174 WSLSWV 179


>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain

Query: 1 WALRWI 6
W+L W+
Sbjct: 174 WSLSWV 179


>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain

Query: 1 WALRWI 6
W+L W+
Sbjct: 174 WSLSWV 179


>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)

Query: 1 WALRWI 6
W+L W+
Sbjct: 174 WSLSWV 179


>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)

Query: 1 WALRWI 6
W+L W+
Sbjct: 174 WSLSWV 179


>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain

Query: 5 WIADR 9
WIADR
Sbjct: 581 WIADR 585


>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54

Query: 1 WALRW 5
W LRW
Sbjct: 6 WKLRW 10


>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)

Query: 1 WALRWIAD 8
WA+ W ++
Sbjct: 143 WAIHWFSN 150


>sp|U18_HHV6U|PUTATIVE immediate early glycoprotein|Human herpesvirus 6A (strain

Query: 2 ALRWIAD 8
A RWI+D
Sbjct: 157 ASRWISD 163


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 3 LRWIADR 9
LRW A+R
Sbjct: 82 LRWYAER 88


>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka

Query: 3 LRWIADRK 10
L W DRK
Sbjct: 2220 LEWNTDRK 2227


>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)

Query: 3 LRWIADRK 10
L W DRK
Sbjct: 2220 LEWNTDRK 2227


>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P

Query: 1 WALRWIADRK 10
W + W+ ++K
Sbjct: 24 WGVGWLDEQK 33


>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 WALRWIADR 9
W L W+ D+
Sbjct: 401 WFLNWVEDK 409


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 WALRWIAD 8
W + WI D
Sbjct: 1017 WQVTWIPD 1024


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 WALRWIAD 8
W + WI D
Sbjct: 1015 WQVTWIPD 1022


>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 WALRWIADR 9
W L W+ +R
Sbjct: 392 WFLNWVENR 400


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 WALRWIAD 8
W + WI D
Sbjct: 1016 WQVTWIPD 1023


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 WALRWIAD 8
W + WI D
Sbjct: 1016 WQVTWIPD 1023


>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 WALRWIADR 9
W L W+ +R
Sbjct: 395 WFLNWVENR 403


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 WALRWIAD 8
W + WI D
Sbjct: 1015 WQVTWIPD 1022


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 WALRWIAD 8
W + WI D
Sbjct: 1014 WQVTWIPD 1021


>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)

Query: 1 WALRWIADR 9
W L +ADR
Sbjct: 311 WVLDVLADR 319


>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)

Query: 1 WALRWIADR 9
W L +ADR
Sbjct: 311 WVLDVLADR 319


>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 WALRWIADR 9
W L W+ +R
Sbjct: 400 WFLNWVENR 408


>sp|YVAN_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 WALRW 5
W +RW
Sbjct: 34 WGIRW 38


>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 WALRWIADR 9
W L W+ +R
Sbjct: 395 WFLNWVENR 403


>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2

Query: 1 WALRWIAD 8
W++ WI +
Sbjct: 103 WSMTWIEE 110


>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2

Query: 1 WALRWIADR 9
W L W+ +R
Sbjct: 393 WFLNWVENR 401




36|Sequence|176|185|IADRKSTFGE

>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988

Query: 2 ADRKST 7
ADRKST
Sbjct: 380 ADRKST 385


>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3

Query: 2 ADRKSTF 8
A RKSTF
Sbjct: 104 APRKSTF 110


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 ADRKSTFGE 10
ADR FGE
Sbjct: 519 ADRLVEFGE 527


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 ADRKSTFGE 10
ADR FGE
Sbjct: 519 ADRLVEFGE 527


>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 DRKSTFG 9
D+K T+G
Sbjct: 204 DKKDTYG 210


>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)

Query: 3 DRKSTFG 9
D+K T+G
Sbjct: 207 DKKDTYG 213




37|Sequence|181|190|STFGERVVAF

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 2 TFGERVVAF 10
T+GER+VAF
Sbjct: 156 TYGERLVAF 164


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 STFGERVVAF 10
+++GER++AF
Sbjct: 150 ASYGERLIAF 159


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 175 TTFAEGVVAF 184


>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 175 TTFAEGVVAF 184


>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 175 TTFAEGVVAF 184


>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 1 STFGERVVAF 10
+TF E V+AF
Sbjct: 175 TTFAEGVIAF 184


>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 1 STFGERVVAF 10
+TF E V+AF
Sbjct: 174 TTFAEGVIAF 183


>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 STFGERVVAF 10
+TF E V+AF
Sbjct: 175 TTFAEGVIAF 184


>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 STFGERVVAF 10
+TF E V+AF
Sbjct: 175 TTFAEGVIAF 184


>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 175 TTFTEGVVAF 184


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 3 FGERVVAF 10
+GER++AF
Sbjct: 152 YGERLIAF 159


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 3 FGERVVAF 10
+GER++AF
Sbjct: 152 YGERLIAF 159


>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 175 TTFTEGVVAF 184


>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 3 FGERVVAF 10
+GER++AF
Sbjct: 152 YGERLIAF 159


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 FGERVVAF 10
+GER++AF
Sbjct: 152 YGERLIAF 159


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 3 FGERVVAF 10
+GER++AF
Sbjct: 152 YGERLIAF 159


>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote

Query: 1 STFGERVVAF 10
+TF E V+AF
Sbjct: 174 TTFAEGVIAF 183


>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)

Query: 1 STFGERVVAF 10
+TF E VVAF
Sbjct: 174 TTFAEGVVAF 183


>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)

Query: 3 FGERVVAF 10
F ERV+AF
Sbjct: 555 FFERVLAF 562


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 2 TFGERVVAF 10
TF E++V+F
Sbjct: 2199 TFPEQLVSF 2207


>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 3 FGERVVAF 10
FG + +AF
Sbjct: 363 FGNKTIAF 370




38|Sequence|186|195|RVVAFAAVEG

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 RVVAFAAVEG 10
R+VAFAAVEG
Sbjct: 160 RLVAFAAVEG 169


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 RVVAFAAVEG 10
R++AFAAVEG
Sbjct: 155 RLIAFAAVEG 164


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 RVVAFAAVEG 10
R++AFAAVEG
Sbjct: 155 RLIAFAAVEG 164


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 RVVAFAAVEG 10
R++AFAAVEG
Sbjct: 155 RLIAFAAVEG 164


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RVVAFAAVEG 10
R++AFAAVEG
Sbjct: 155 RLIAFAAVEG 164


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RVVAFAAVEG 10
R++AFAAVEG
Sbjct: 155 RLIAFAAVEG 164


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 RVVAFAAVEG 10
R++AFAAVEG
Sbjct: 155 RLIAFAAVEG 164


>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5

Query: 1 RVVAFAA 7
RVVAFA+
Sbjct: 626 RVVAFAS 632


>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2

Query: 1 RVVAFAA 7
RVVAFA+
Sbjct: 626 RVVAFAS 632




39|Sequence|191|200|AAVEGVFFSG

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 165 AAVEGIFFSG 174


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 160 AAVEGIFFSG 169


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 160 AAVEGIFFSG 169


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 160 AAVEGIFFSG 169


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 160 AAVEGIFFSG 169


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 160 AAVEGIFFSG 169


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 AAVEGVFFSG 10
AAVEG+FFSG
Sbjct: 160 AAVEGIFFSG 169


>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)

Query: 2 AVEGVFF 8
A+EG+FF
Sbjct: 38 AIEGIFF 44


>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)

Query: 3 VEGVFFSG 10
V GVFF+G
Sbjct: 374 VNGVFFNG 381


>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3

Query: 1 AAVEGVF 7
AA+EGVF
Sbjct: 315 AAIEGVF 321


>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus

Query: 3 VEGVFFSG 10
V+G+F+SG
Sbjct: 423 VDGMFYSG 430


>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 VEGVFFSG 10
V+G+F+SG
Sbjct: 423 VDGMFYSG 430


>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 VEGVFFSG 10
V+G+F+SG
Sbjct: 423 VDGMFYSG 430


>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)

Query: 3 VEGVFFSG 10
V+G+F+SG
Sbjct: 423 VDGMFYSG 430


>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)

Query: 1 AAVEGVFFSG 10
A +GVFF+G
Sbjct: 372 AHYKGVFFNG 381


>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1

Query: 1 AAVEGVF 7
+A+EGVF
Sbjct: 323 SAIEGVF 329


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 3 VEGVFF 8
+EG+FF
Sbjct: 158 IEGIFF 163


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 3 VEGVFF 8
+EG+FF
Sbjct: 158 IEGIFF 163


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 VEGVFF 8
+EG+FF
Sbjct: 153 IEGIFF 158


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 VEGVFF 8
+EG+FF
Sbjct: 153 IEGIFF 158


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 3 VEGVFF 8
+EG+FF
Sbjct: 153 IEGIFF 158


>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)

Query: 5 GVFFSG 10
GVFF+G
Sbjct: 376 GVFFNG 381


>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)

Query: 5 GVFFSG 10
GVFF+G
Sbjct: 376 GVFFNG 381


>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 1 AAVEGVFFS 9
+EG+F+S
Sbjct: 127 GGLEGIFYS 135


>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)

Query: 3 VEGVFFSG 10
V+G+ FSG
Sbjct: 321 VQGIAFSG 328


>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)

Query: 3 VEGVFFSG 10
V+G+ FSG
Sbjct: 321 VQGIAFSG 328


>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)

Query: 3 VEGVFFSG 10
V+G+ FSG
Sbjct: 321 VQGIAFSG 328


>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 3 VEGVFFSG 10
V+G+ FSG
Sbjct: 321 VQGIAFSG 328


>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 AAVEGVF 7
AAV GVF
Sbjct: 788 AAVSGVF 794


>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV22|MINOR capsid protein L2|Human papillomavirus 22

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe

Query: 1 AAVEGVFF 8
AAV VFF
Sbjct: 203 AAVNSVFF 210


>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)

Query: 5 GVFFSG 10
G+FF+G
Sbjct: 376 GIFFNG 381


>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17

Query: 5 GVFFSG 10
GVFF G
Sbjct: 49 GVFFGG 54


>sp|NEF_HV2EH|PROTEIN Nef|Human immunodeficiency virus type 2

Query: 3 VEGVFFS 9
+EG+F+S
Sbjct: 111 LEGIFYS 117


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 3 VEGVFF 8
VEG++F
Sbjct: 156 VEGIYF 161


>sp|UL92_HHV6Z|PROTEIN U63|Human herpesvirus 6B (strain Z29)

Query: 2 AVEGVFFSG 10
A G+F+SG
Sbjct: 78 AKTGLFYSG 86


>sp|UL92_HHV6U|PROTEIN U63|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 AVEGVFFSG 10
A G+F+SG
Sbjct: 76 AKTGLFYSG 84


>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62

Query: 5 GVFFSG 10
GVFF G
Sbjct: 50 GVFFGG 55


>sp|ARBH_HHV8P|APOPTOSIS regulator Bcl-2 homolog|Human herpesvirus 8 type P

Query: 2 AVEGVFFS 9
A+EG+F +
Sbjct: 12 AIEGIFMA 19




40|Sequence|196|205|VFFSGSFAAI

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 VFFSGSFAAI 10
+FFSGSFAAI
Sbjct: 170 IFFSGSFAAI 179


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 VFFSGSFAAI 10
+FFSGSFA+I
Sbjct: 165 IFFSGSFASI 174


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 VFFSGSFAAI 10
+FFSGSFA+I
Sbjct: 165 IFFSGSFASI 174


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 VFFSGSFAAI 10
+FFSGSFA+I
Sbjct: 165 IFFSGSFASI 174


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 VFFSGSFAAI 10
+FFSGSFA+I
Sbjct: 165 IFFSGSFASI 174


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 VFFSGSFAAI 10
+FFSGSFA+I
Sbjct: 165 IFFSGSFASI 174


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 VFFSGSFAAI 10
+FFSGSFA+I
Sbjct: 165 IFFSGSFASI 174


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 1 VFFSGSFAAI 10
+FF SFAAI
Sbjct: 161 IFFVSSFAAI 170


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 1 VFFSGSFAAI 10
+FF SFAAI
Sbjct: 161 IFFVSSFAAI 170


>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)

Query: 1 VFFSGS 6
VFF+GS
Sbjct: 194 VFFTGS 199


>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 VFFSGS 6
VFF+GS
Sbjct: 194 VFFTGS 199


>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)

Query: 1 VFFSGS 6
VFF+GS
Sbjct: 194 VFFTGS 199


>sp|VP8_VARV|CORE protein VP8|Variola virus

Query: 1 VFFSGSFA 8
+FF+GS +
Sbjct: 14 IFFAGSIS 21


>sp|VP8_VAR67|CORE protein VP8|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 1 VFFSGSFA 8
+FF+GS +
Sbjct: 14 IFFAGSIS 21


>sp|VP8_VACCC|CORE protein VP8|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 VFFSGSFA 8
+FF+GS +
Sbjct: 14 IFFAGSIS 21


>sp|VP8_MONPV|CORE protein VP8|Monkeypox virus (MPXV)

Query: 1 VFFSGSFA 8
+FF+GS +
Sbjct: 14 IFFAGSIS 21




41|Sequence|201|210|SFAAIFWLKK

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 SFAAIFWLKK 10
SFAAIFW+KK
Sbjct: 175 SFAAIFWIKK 184


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 SFAAIFWLKK 10
SFA+IFWLKK
Sbjct: 170 SFASIFWLKK 179


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 SFAAIFWLKK 10
SFA+IFWLKK
Sbjct: 170 SFASIFWLKK 179


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 SFAAIFWLKK 10
SFA+IFWLKK
Sbjct: 170 SFASIFWLKK 179


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 SFAAIFWLKK 10
SFA+IFWLKK
Sbjct: 170 SFASIFWLKK 179


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 SFAAIFWLKK 10
SFA+IFWLKK
Sbjct: 170 SFASIFWLKK 179


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 SFAAIFWLKK 10
SFA+IFWLKK
Sbjct: 170 SFASIFWLKK 179


>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 3 AAIFWLKK 10
AA+FW K+
Sbjct: 279 AALFWYKR 286


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 1 SFAAIFWLK 9
S AA+FW +
Sbjct: 315 SAAALFWFR 323


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 3 AAIFWLK 9
AA+FW +
Sbjct: 318 AALFWFR 324


>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 271 AALFWYK 277


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 272 AALFWYK 278


>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 272 AALFWYK 278


>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 272 AALFWYK 278


>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 270 AALFWYK 276


>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 272 AALFWYK 278


>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 271 AALFWYK 277


>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 271 AALFWYK 277


>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 271 AALFWYK 277


>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23

Query: 2 FAAIFWLKK 10
F FWLK+
Sbjct: 313 FNRPFWLKR 321


>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22

Query: 2 FAAIFWLKK 10
F FWLK+
Sbjct: 313 FNRPFWLKR 321


>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 FAAIFW 7
F+A+FW
Sbjct: 759 FSALFW 764


>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 271 AALFWYK 277


>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 270 AALFWYK 276


>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 275 AALFWYK 281


>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 271 AALFWYK 277


>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 273 AALFWYK 279


>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42

Query: 3 AAIFWLK 9
AAI+W +
Sbjct: 311 AAIYWFR 317


>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5

Query: 3 AAIFWLK 9
AA+FW K
Sbjct: 273 AALFWYK 279


>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32

Query: 3 AAIFWLK 9
AAI+W +
Sbjct: 310 AAIYWFR 316


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 SFAAIFWLK 9
+ +A+FW K
Sbjct: 274 TLSALFWYK 282


>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15

Query: 1 SFAAIFWLK 9
+ +A+FW K
Sbjct: 267 TLSALFWYK 275


>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)

Query: 4 AIFWLK 9
A+FWL+
Sbjct: 757 AMFWLQ 762


>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)

Query: 4 AIFWLK 9
A+FWL+
Sbjct: 771 ALFWLE 776


>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)

Query: 4 AIFWLK 9
A+FWL+
Sbjct: 771 ALFWLE 776


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 4 AIFWLKK 10
AIF+LK+
Sbjct: 2495 AIFYLKR 2501


>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17

Query: 2 FAAIFWLK 9
+A+FW K
Sbjct: 275 LSALFWYK 282


>sp|VE6_HPV04|PROTEIN E6|Human papillomavirus 4

Query: 4 AIFWLKK 10
A+F+LKK
Sbjct: 40 ALFYLKK 46


>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 FAAIFWL 8
F A+FW+
Sbjct: 749 FLALFWV 755


>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1

Query: 2 FAAIFWL 8
F A+FW+
Sbjct: 748 FLALFWV 754


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 5 IFWLKK 10
I WLKK
Sbjct: 371 ITWLKK 376


>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24

Query: 1 SFAAIFWLK 9
+ +A+FW K
Sbjct: 272 TVSALFWYK 280




42|Sequence|206|215|FWLKKRGLMP

>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FWLKKRGLMP 10
FWLKKRGLMP
Sbjct: 175 FWLKKRGLMP 184


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FWLKKRGLMP 10
FWLKKRGLMP
Sbjct: 175 FWLKKRGLMP 184


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 FWLKKRGLMP 10
FWLKKRGLMP
Sbjct: 175 FWLKKRGLMP 184


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FWLKKRGLMP 10
FWLKKRGLMP
Sbjct: 175 FWLKKRGLMP 184


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FWLKKRGLMP 10
FWLKKRGLMP
Sbjct: 175 FWLKKRGLMP 184


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 FWLKKRGLMP 10
FWLKKRGLMP
Sbjct: 175 FWLKKRGLMP 184


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 FWLKKRGLMP 10
FW+KKRGLMP
Sbjct: 180 FWIKKRGLMP 189


>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)

Query: 1 FWLKKRG 7
+WLK+RG
Sbjct: 1051 YWLKERG 1057


>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)

Query: 1 FWLKKRG 7
+WLK+RG
Sbjct: 1051 YWLKERG 1057


>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)

Query: 1 FWLKKRG 7
+WLK+RG
Sbjct: 1051 YWLKERG 1057


>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)

Query: 1 FWLKKRG 7
+W+K+RG
Sbjct: 1057 YWIKERG 1063


>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)

Query: 1 FWLKKRG 7
+W+K+RG
Sbjct: 1057 YWIKERG 1063


>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain

Query: 2 WLKKR 6
WLKKR
Sbjct: 373 WLKKR 377


>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)

Query: 2 WLKKRGLM 9
WL RGL+
Sbjct: 221 WLATRGLL 228


>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)

Query: 2 WLKKRGLM 9
WL RGL+
Sbjct: 221 WLATRGLL 228


>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)

Query: 2 WLKKRGLM 9
WL RGL+
Sbjct: 221 WLATRGLL 228


>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)

Query: 2 WLKKRGLM 9
WL RGL+
Sbjct: 221 WLAARGLL 228


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 WL---KKRGLM 9
WL KKRGL+
Sbjct: 2896 WLLDGKKRGLL 2906


>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23

Query: 1 FWLKKRGLM 9
++ +KRG+M
Sbjct: 44 YYARKRGIM 52


>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain

Query: 1 FWLKKRGLMP 10
FW K+ L P
Sbjct: 291 FWETKKKLFP 300


>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)

Query: 1 FWLKKRGLMP 10
FW K+ L P
Sbjct: 291 FWETKKKLFP 300


>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FWLKKRGLM 9
FW GL+
Sbjct: 668 FWFHPEGLL 676


>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain

Query: 2 WLKKRG 7
WLKK G
Sbjct: 3138 WLKKHG 3143


>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936

Query: 1 FWLKKRG 7
WL K+G
Sbjct: 166 LWLTKKG 172


>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933

Query: 1 FWLKKRG 7
WL K+G
Sbjct: 165 LWLTKKG 171


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 1 FWLKKRG 7
WL K+G
Sbjct: 166 LWLTKKG 172


>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 FWLKKRGLM 9
FW GL+
Sbjct: 668 FWFHPEGLL 676


>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)

Query: 2 WLKKRGLMP 10
WL GL+P
Sbjct: 256 WLMVDGLLP 264


>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus

Query: 3 LKKRGLMP 10
L+K GL P
Sbjct: 1149 LRKSGLQP 1156


>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)

Query: 2 WLKKRGLMP 10
WL GL+P
Sbjct: 163 WLTCLGLVP 171


>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)

Query: 1 FWLKKRGL 8
FW K+G
Sbjct: 1996 FWTTKKGF 2003


>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 2 WLKKRG 7
WL K+G
Sbjct: 163 WLTKKG 168


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 2 WLKKRGLM 9
WL++RG +
Sbjct: 2580 WLEERGYL 2587


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 2 WLKKRGLMP 10
WL GL+P
Sbjct: 256 WLMVDGLLP 264


>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985

Query: 1 FWLKKRG 7
W+ KRG
Sbjct: 166 LWIVKRG 172


>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37

Query: 2 WLKKRG 7
WLKK+
Sbjct: 1107 WLKKKA 1112


>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)

Query: 2 WLKKRG 7
WLKK+
Sbjct: 1107 WLKKKA 1112


>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)

Query: 2 WLKKRG 7
WLKK+
Sbjct: 1108 WLKKKA 1113


>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)

Query: 2 WLKKRG 7
WLKK+
Sbjct: 1108 WLKKKA 1113


>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)

Query: 2 WLKKRG 7
WLKK+
Sbjct: 1108 WLKKKA 1113


>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)

Query: 2 WLKKRGLMP 10
WL GL+P
Sbjct: 163 WLTCLGLVP 171


>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 523 LKKKGLI 529


>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 522 LKKKGLI 528


>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 522 LKKKGLI 528


>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 522 LKKKGLI 528


>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 522 LKKKGLI 528


>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 522 LKKKGLI 528


>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)

Query: 3 LKKRGLM 9
LKK+GL+
Sbjct: 522 LKKKGLI 528


>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 2 WLKKRGL 8
WL +GL
Sbjct: 137 WLSSKGL 143


>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 WLKKRGL 8
WL +GL
Sbjct: 137 WLSSKGL 143


>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 WLKKRGL 8
WL +GL
Sbjct: 137 WLSSKGL 143


>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)

Query: 2 WLKKRGL 8
WL +GL
Sbjct: 137 WLSSKGL 143


>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)

Query: 2 WLKKRGL 8
WL +GL
Sbjct: 136 WLSSKGL 142


>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1865 WLDENGLL 1872


>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1865 WLDENGLL 1872


>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1865 WLDENGLL 1872


>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1865 WLDENGLL 1872


>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1865 WLDENGLL 1872


>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 2 WLKKRG 7
W +KRG
Sbjct: 868 WYQKRG 873


>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1865 WLDENGLL 1872


>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1863 WLHENGLL 1870


>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype

Query: 2 WLKKRGLM 9
WL + GL+
Sbjct: 1699 WLDENGLL 1706


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2574 WLEERG 2579


>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2577 WLEERG 2582


>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2577 WLEERG 2582


>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy

Query: 2 WLKKRGL 8
W K+RG+
Sbjct: 949 WAKERGI 955


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2575 WLEERG 2580


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2575 WLEERG 2580


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2575 WLEERG 2580


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2575 WLEERG 2580


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 2 WLKKRG 7
WL++RG
Sbjct: 2575 WLEERG 2580




43|Sequence|211|220|RGLMPGLTFS

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 185 RGLMPGLTFS 194


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 180 RGLMPGLTFS 189


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 180 RGLMPGLTFS 189


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 180 RGLMPGLTFS 189


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 180 RGLMPGLTFS 189


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 180 RGLMPGLTFS 189


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 RGLMPGLTFS 10
RGLMPGLTFS
Sbjct: 180 RGLMPGLTFS 189


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 RGLMPGLTFS 10
RGLMPG+ +
Sbjct: 171 RGLMPGICLA 180


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RGLMPGLTFS 10
RGLMPG+ +
Sbjct: 171 RGLMPGICLA 180


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 RGLMPGLTFS 10
RGLMPG+ +
Sbjct: 171 RGLMPGICLA 180


>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P

Query: 1 RGLMPGLTFS 10
RG+MPG+ +
Sbjct: 174 RGIMPGVCLA 183


>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)

Query: 4 MPGLTFS 10
+PG+TF+
Sbjct: 610 LPGMTFT 616


>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New

Query: 2 GLMPGLTFS 10
G++PG+T S
Sbjct: 462 GILPGMTPS 470


>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)

Query: 1 RGLMPGLTF 9
R + PG TF
Sbjct: 1752 REMHPGFTF 1760


>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)

Query: 2 GLMPGLTFS 10
GL+ G TFS
Sbjct: 194 GLISGSTFS 202


>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)

Query: 2 GLMPGLTFS 10
GL+ G TFS
Sbjct: 194 GLISGSTFS 202


>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 GLMPGLTFS 10
GL+ G TFS
Sbjct: 194 GLISGSTFS 202


>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)

Query: 2 GLMPGLTFS 10
GL+ G TFS
Sbjct: 194 GLISGSTFS 202


>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)

Query: 2 GLMPGLTFS 10
GL+ G TFS
Sbjct: 194 GLISGSTFS 202


>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)

Query: 2 GLMPGLTFS 10
GL+ G TFS
Sbjct: 194 GLISGSTFS 202


>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 RGLMPG 6
RG++PG
Sbjct: 64 RGMLPG 69


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 LMPGLTFS 10
+ PG TFS
Sbjct: 3369 IQPGQTFS 3376


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 3 LMPGLTFS 10
+ PG TFS
Sbjct: 3346 IQPGQTFS 3353


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 LMPGLTFS 10
+ PG TFS
Sbjct: 3369 IQPGQTFS 3376


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 3 LMPGLTFS 10
+ PG TFS
Sbjct: 3346 IQPGQTFS 3353


>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)

Query: 3 LMPGLTFS 10
+MP LT+S
Sbjct: 14 IMPVLTYS 21


>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3

Query: 1 RGLMPGLT 8
RG MP T
Sbjct: 227 RGFMPSTT 234


>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 51 GNLPGCSFS 59


>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 167 GNLPGCSFS 175


>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 39 GNLPGCSFS 47


>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)

Query: 2 GLMPGLTFS 10
G +PG +FS
Sbjct: 51 GNLPGCSFS 59




44|Sequence|216|225|GLTFSNELIS

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 185 GLTFSNELIS 194


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 185 GLTFSNELIS 194


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 185 GLTFSNELIS 194


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 185 GLTFSNELIS 194


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 185 GLTFSNELIS 194


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 185 GLTFSNELIS 194


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 GLTFSNELIS 10
GLTFSNELIS
Sbjct: 190 GLTFSNELIS 199


>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)

Query: 2 LTFSNELIS 10
L+FSN L+S
Sbjct: 6748 LSFSNHLVS 6756


>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47

Query: 2 LTFSNE 7
LTF+NE
Sbjct: 117 LTFNNE 122




45|Sequence|221|230|NELISRDEGL

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 190 NELISRDEGL 199


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 190 NELISRDEGL 199


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 190 NELISRDEGL 199


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 190 NELISRDEGL 199


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 190 NELISRDEGL 199


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 190 NELISRDEGL 199


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 NELISRDEGL 10
NELISRDEGL
Sbjct: 195 NELISRDEGL 204


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 1 NELISRDEGL 10
N+LISRDE +
Sbjct: 186 NDLISRDEAI 195


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 1 NELISRDEGL 10
N+LISRDE +
Sbjct: 186 NDLISRDEAI 195


>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)

Query: 1 NELISRDEGL 10
N+LISRDE +
Sbjct: 214 NDLISRDEAV 223


>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)

Query: 1 NELISRDEGL 10
N+LISRDE +
Sbjct: 214 NDLISRDEAV 223


>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)

Query: 1 NELISRDEGL 10
N+LISRDE +
Sbjct: 211 NDLISRDEAV 220


>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)

Query: 1 NELISRDEGL 10
N+LISRDE +
Sbjct: 211 NDLISRDEAV 220


>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 NELISRDEG 9
N+ ISRDE
Sbjct: 56 NKAISRDEA 64


>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 ISRDEGL 10
++RDEGL
Sbjct: 81 LARDEGL 87


>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 ISRDEGL 10
++RDEGL
Sbjct: 81 LARDEGL 87


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 2 ELISRDE 8
ELI RDE
Sbjct: 2207 ELIERDE 2213


>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37

Query: 1 NELISRDE 8
N+LI+ DE
Sbjct: 327 NDLINEDE 334


>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United

Query: 2 ELISRDEGL 10
E+I++ EGL
Sbjct: 622 EMITQTEGL 630




46|Sequence|226|235|RDEGLHCDFA

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 200 RDEGLHCDFA 209


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 195 RDEGLHCDFA 204


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 195 RDEGLHCDFA 204


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 195 RDEGLHCDFA 204


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 195 RDEGLHCDFA 204


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 195 RDEGLHCDFA 204


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 RDEGLHCDFA 10
RDEGLHCDFA
Sbjct: 195 RDEGLHCDFA 204


>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus

Query: 3 EGLHCDFA 10
EG+ CDF+
Sbjct: 379 EGVECDFS 386


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 2 DEGLHCDFA 10
DE LH DF+
Sbjct: 593 DEFLHSDFS 601


>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean

Query: 4 GLHCD 8
G+HCD
Sbjct: 1470 GIHCD 1474


>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 2 DEGLHCDFA 10
DE LH D A
Sbjct: 857 DEALHRDLA 865


>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 2 DEGLHCDFA 10
DE LH D A
Sbjct: 857 DEALHRDLA 865


>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 2 DEGLHCDFA 10
DE LH D A
Sbjct: 857 DEALHRDLA 865


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 6 HCDF 9
HCDF
Sbjct: 2030 HCDF 2033


>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 6 HCDF 9
HCDF
Sbjct: 2030 HCDF 2033


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 6 HCDF 9
HCDF
Sbjct: 2030 HCDF 2033


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 6 HCDF 9
HCDF
Sbjct: 2030 HCDF 2033


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 6 HCDF 9
HCDF
Sbjct: 2030 HCDF 2033


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 6 HCDF 9
HCDF
Sbjct: 2030 HCDF 2033


>sp|CCU83_HHV6U|PUTATIVE CC-type chemokine U83|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 DEGLHCDFA 10
DEG CD A
Sbjct: 71 DEGSMCDMA 79


>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 4 GLHCDFA 10
G+HC+++
Sbjct: 127 GVHCNYS 133


>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60

Query: 6 HCDF 9
HCDF
Sbjct: 220 HCDF 223


>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 1 RDEGLHCD 8
RDE CD
Sbjct: 313 RDEIFRCD 320


>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)

Query: 1 RDEGLHCD 8
RDE CD
Sbjct: 313 RDEIFRCD 320


>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 2 DEGLHCDFA 10
D G +CD A
Sbjct: 338 DRGWYCDNA 346


>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 2 DEGLHCDFA 10
D G +CD A
Sbjct: 338 DRGWYCDNA 346


>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A

Query: 2 DEGLHCDFA 10
D G +CD A
Sbjct: 338 DRGWYCDNA 346


>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B

Query: 2 DEGLHCDFA 10
D G +CD A
Sbjct: 338 DRGWYCDNA 346


>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus

Query: 2 DEGLHCDFA 10
D G +CD A
Sbjct: 338 DRGWYCDNA 346


>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain

Query: 2 DEGLHCDFA 10
DE LH F
Sbjct: 1797 DESLHLSFG 1805


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 GLHCD 8
GL+CD
Sbjct: 105 GLYCD 109


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 3 EGLHCDF 9
+ LHC++
Sbjct: 2048 KNLHCEY 2054


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3 EGLHCDF 9
+ LHC++
Sbjct: 2048 KNLHCEY 2054


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 2 DEGLHCDFA 10
+EG H D A
Sbjct: 53 EEGYHLDTA 61


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 2 DEGLHCDFA 10
+EG H D A
Sbjct: 53 EEGYHLDTA 61


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 2 DEGLHCDFA 10
+EG H D A
Sbjct: 53 EEGYHLDTA 61




47|Sequence|231|240|HCDFACLMFQ

>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 HCDFACLMFQ 10
HCDFACLMF+
Sbjct: 200 HCDFACLMFK 209


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HCDFACLMFQ 10
HCDFACLMF+
Sbjct: 200 HCDFACLMFK 209


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 HCDFACLMFQ 10
HCDFACLMF+
Sbjct: 200 HCDFACLMFK 209


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 HCDFACLMFQ 10
HCDFACLMF+
Sbjct: 200 HCDFACLMFK 209


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 HCDFACLMFQ 10
HCDFACLMF+
Sbjct: 200 HCDFACLMFK 209


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 HCDFACLMFQ 10
HCDFACLMF+
Sbjct: 200 HCDFACLMFK 209


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 HCDFACLMFQ 10
HCDFAC+MF+
Sbjct: 205 HCDFACIMFK 214


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 1 HCDFACLMF 9
HC++ CL F
Sbjct: 2051 HCEYICLGF 2059


>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)

Query: 1 HCDFA-CLMFQ 10
HC CLMFQ
Sbjct: 522 HCALLDCLMFQ 532


>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)

Query: 1 HCDFA-CLMFQ 10
HC CLMFQ
Sbjct: 522 HCALLDCLMFQ 532


>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain

Query: 1 HCDFACLMFQ 10
H D CL +Q
Sbjct: 578 HLDEVCLRYQ 587


>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)

Query: 1 HCDFACLMF 9
H D+ C +F
Sbjct: 879 HADYTCKVF 887


>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain

Query: 1 HCDFACLMF 9
H D+ C +F
Sbjct: 879 HADYTCKVF 887


>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)

Query: 1 HCDFACLM 8
HC ACL+
Sbjct: 602 HCSDACLL 609


>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 1 HCDFACLM 8
HC ACL+
Sbjct: 602 HCSDACLL 609


>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 1 HCDFACLM 8
HC ACL+
Sbjct: 602 HCSDACLL 609


>sp|YVEB_VACCC|UNCHARACTERIZED 11.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 HCDFACLM 8
HC CLM
Sbjct: 48 HCSTICLM 55


>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)

Query: 2 CDFACLM 8
C+F C +
Sbjct: 464 CNFCCFL 470


Query: 1 HCDFACL 7
+C F CL
Sbjct: 311 YCTFRCL 317


>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986

Query: 2 CDFACL 7
CD AC+
Sbjct: 473 CDNACI 478


>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 2 CDFACL 7
CD AC+
Sbjct: 473 CDNACI 478


>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979

Query: 2 CDFACL 7
CD AC+
Sbjct: 473 CDNACI 478


>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong

Query: 2 CDFACL 7
CD AC+
Sbjct: 473 CDNACI 478


>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975

Query: 2 CDFACL 7
CD AC+
Sbjct: 490 CDNACI 495


>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong

Query: 2 CDFACL 7
CD AC+
Sbjct: 473 CDNACI 478


>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971

Query: 2 CDFACL 7
CD AC+
Sbjct: 488 CDNACI 493


>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930

Query: 2 CDFACL 7
CD AC+
Sbjct: 488 CDDACM 493


>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig

Query: 2 CDFACL 7
CD AC+
Sbjct: 488 CDDACM 493


>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 2 CDFACL 7
CD AC+
Sbjct: 489 CDNACI 494


>sp|CEP1_HHV8P|CYTOPLASMIC envelopment protein 1|Human herpesvirus 8 type P

Query: 1 HCDFACL 7
H D ACL
Sbjct: 64 HLDIACL 70


>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)

Query: 1 HCDFACLMF 9
H D+ C +F
Sbjct: 871 HPDYQCQVF 879


>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean

Query: 1 HCDFACLMFQ 10
HC AC +Q
Sbjct: 732 HCYGACTKYQ 741


>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 HCDFACLMF 9
H D+ C +F
Sbjct: 872 HPDYQCQVF 880


>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 HCDFACLMF 9
H D+ C +F
Sbjct: 874 HPDYQCQVF 882


>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)

Query: 1 HCDFACLM 8
H D+ C +
Sbjct: 135 HADYVCAL 142


>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo

Query: 1 HCDFACLMFQ 10
HC AC +Q
Sbjct: 732 HCYGACTKYQ 741


>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain

Query: 1 HCDFACLMF 9
H D+ C +F
Sbjct: 874 HPDYQCQVF 882




48|Sequence|236|245|CLMFQYLVNK

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 CLMFQYLVN 9
C+MF++L+N
Sbjct: 210 CIMFKHLLN 218


>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)

Query: 4 FQYLVN 9
FQYL+N
Sbjct: 355 FQYLIN 360


>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 4 FQYLVN 9
FQYL+N
Sbjct: 355 FQYLIN 360


>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus

Query: 1 CLMFQYLVNK 10
CL+F+ VN+
Sbjct: 382 CLVFEPFVNQ 391


>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 CLMFQYLVNK 10
CL+F+ VN+
Sbjct: 382 CLVFEPFVNQ 391


>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)

Query: 1 CLMFQYLVNK 10
CL+F+ VN+
Sbjct: 382 CLVFEPFVNQ 391


>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)

Query: 1 CLMFQYLVNK 10
CL+F+ VN+
Sbjct: 382 CLVFEPFVNQ 391


>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 CLMFQYLVNK 10
CL+F+ VN+
Sbjct: 382 CLVFEPFVNQ 391


>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)

Query: 1 CLMFQYL 7
C MF YL
Sbjct: 678 CEMFTYL 684


>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)

Query: 1 CLMFQYL 7
C MF YL
Sbjct: 676 CEMFTYL 682


>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)

Query: 1 CLMFQYL 7
C MF YL
Sbjct: 677 CEMFTYL 683


>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)

Query: 1 CLMFQYL 7
C MF YL
Sbjct: 678 CEMFTYL 684


>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)

Query: 1 CLMFQYL 7
CLM YL
Sbjct: 127 CLMVMYL 133


>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)

Query: 1 CLMFQYL 7
CLM YL
Sbjct: 127 CLMVMYL 133


>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 CLMFQYL 7
CLM YL
Sbjct: 127 CLMVMYL 133


>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann

Query: 1 CLMFQYL 7
CLM YL
Sbjct: 127 CLMVMYL 133


>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)

Query: 1 CLMFQYL 7
CLM YL
Sbjct: 127 CLMVMYL 133


>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)

Query: 1 CLMFQYL 7
CLM YL
Sbjct: 127 CLMVMYL 133


>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)

Query: 5 QYLVNK 10
QYL+NK
Sbjct: 1535 QYLLNK 1540


>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)

Query: 5 QYLVNK 10
QYL+NK
Sbjct: 1534 QYLLNK 1539


>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)

Query: 5 QYLVNK 10
QYL+NK
Sbjct: 1534 QYLLNK 1539


>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 543 CLAFSYM 549


>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 543 CLAFSYM 549


>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 543 CLAFSYM 549


>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 543 CLAFSYM 549


>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 543 CLAFSYM 549


>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 543 CLAFSYM 549


>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 533 CLAFSYM 539


>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 539 CLAFSYM 545


>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 544 CLAFSYM 550


>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 546 CLAFSYM 552


>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 546 CLAFSYM 552


>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 546 CLAFSYM 552


>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 539 CLAFSYM 545


>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 546 CLAFSYM 552


>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 546 CLAFSYM 552


>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 546 CLAFSYM 552


>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2

Query: 1 CLMFQYL 7
CL F Y+
Sbjct: 539 CLAFSYM 545


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 3 MFQYLVN 9
+F YLVN
Sbjct: 622 LFAYLVN 628


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 3 MFQYLVN 9
+F YLVN
Sbjct: 622 LFAYLVN 628


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 3 MFQYLVN 9
+F YLVN
Sbjct: 622 LFAYLVN 628




49|Sequence|241|250|YLVNKPSEER

>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b

Query: 3 VNKPSEER 10
+N PSE+R
Sbjct: 478 INGPSEDR 485


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 1 YLVNKPS 7
Y+VN+P+
Sbjct: 1035 YIVNRPT 1041


>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30

Query: 2 LVNKPSEE 9
+VN PSE+
Sbjct: 279 IVNVPSEQ 286


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 YLVNKPS 7
YLV KP+
Sbjct: 232 YLVGKPN 238


>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P

Query: 1 YLVNKPSEER 10
+ V KP EE+
Sbjct: 191 FRVRKPEEEQ 200


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 1 YLVNKPS 7
YLV KP+
Sbjct: 232 YLVEKPN 238




50|Sequence|246|255|PSEERVREII

>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)

Query: 1 PSEERVREII 10
PSE+R +EI+
Sbjct: 508 PSEKRRKEIV 517


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 PSEERVRE 8
P E R+RE
Sbjct: 2003 PGETRLRE 2010


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 4 ERVREII 10
ER+REII
Sbjct: 1927 ERLREII 1933




51|Sequence|251|260|VREIIVDAVK

>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human

Query: 1 VREIIVDAVK 10
VRE ++D+VK
Sbjct: 205 VRENLIDSVK 214


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 VREIIVDAV 9
VR+II++AV
Sbjct: 225 VRDIIIEAV 233


>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 3 EIIVDAVK 10
E+I+DAVK
Sbjct: 92 ELILDAVK 99


>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 REIIVDAV 9
+EII DAV
Sbjct: 325 KEIIFDAV 332


>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)

Query: 2 REIIVDAV 9
+EII DAV
Sbjct: 326 KEIIFDAV 333


>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense

Query: 3 EIIVDAVK 10
EI+VDA K
Sbjct: 2056 EIVVDAEK 2063


>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P

Query: 1 VREIIVDAVK 10
VR+ + DAVK
Sbjct: 164 VRQGVSDAVK 173


>sp|NSP6_ROTH6|NON-STRUCTURAL protein 6|Rotavirus A (strain

Query: 3 EIIVDAVK 10
++I+DA+K
Sbjct: 81 QVILDAIK 88




52|Sequence|256|265|VDAVKIEQEF

>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 VDAVKIEQEF 10
DAV IEQEF
Sbjct: 225 TDAVSIEQEF 234


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 VDAVKIEQEF 10
DAV IEQEF
Sbjct: 225 TDAVSIEQEF 234


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 VDAVKIEQEF 10
DAV IEQEF
Sbjct: 225 TDAVSIEQEF 234


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 VDAVKIEQEF 10
DAV IEQEF
Sbjct: 225 TDAVSIEQEF 234


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 VDAVKIEQEF 10
DAV IEQEF
Sbjct: 225 TDAVSIEQEF 234


>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)

Query: 1 VDAVKIE 7
+DA KIE
Sbjct: 410 IDATKIE 416




53|Sequence|261|270|IEQEFLTEAL

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 IEQEFLTEAL 10
IEQEFLT AL
Sbjct: 230 IEQEFLTAAL 239


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IEQEFLTEAL 10
IEQEFLT AL
Sbjct: 230 IEQEFLTAAL 239


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IEQEFLTEAL 10
IEQEFLT AL
Sbjct: 230 IEQEFLTAAL 239


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 IEQEFLTEAL 10
IEQEFLT AL
Sbjct: 230 IEQEFLTVAL 239


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 IEQEFLTEAL 10
IEQEFLT AL
Sbjct: 230 IEQEFLTVAL 239


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 IEQEFLTEAL 10
IEQEFLT AL
Sbjct: 230 IEQEFLTVAL 239


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 IEQEFLTEAL 10
IE+ FLTEA+
Sbjct: 235 IEKNFLTEAI 244


>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New

Query: 4 EFLTEAL 10
EF+TEA
Sbjct: 135 EFITEAF 141


>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A

Query: 4 EFLTEAL 10
+FLTEA+
Sbjct: 1003 DFLTEAI 1009


>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus

Query: 4 EFLTEAL 10
+FLTEA+
Sbjct: 1003 DFLTEAI 1009


>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B

Query: 4 EFLTEAL 10
+FLTEA+
Sbjct: 1003 DFLTEAI 1009




54|Sequence|266|275|LTEALPVGLI

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 LTEALPVGLI 10
LTEA+PV LI
Sbjct: 240 LTEAIPVKLI 249


>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LTEALPVGL 9
+TE +P+G+
Sbjct: 10 ITETIPIGM 18


>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)

Query: 1 LTEALPVGL 9
+TE +P+G+
Sbjct: 10 ITETIPIGM 18


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 LTEALPVGL 9
+TEA VGL
Sbjct: 2453 MTEAAAVGL 2461


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 LTEALPVGL 9
+TEA VGL
Sbjct: 2453 MTEAAAVGL 2461


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 2 TEALPVGL 9
TE+ P GL
Sbjct: 330 TESTPAGL 337


>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 TEALPVGLI 10
++ LP+GLI
Sbjct: 30 SKLLPLGLI 38


>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 TEALPVGLI 10
++ LP+GLI
Sbjct: 99 SKLLPLGLI 107


>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)

Query: 2 TEALPVGLI 10
++ LP+GLI
Sbjct: 99 SKLLPLGLI 107




55|Sequence|271|280|PVGLIGMNCI

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 245 PVKLIGMNC 253


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 240 PVKLIGMNC 248


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 240 PVKLIGMNC 248


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 240 PVKLIGMNC 248


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 240 PVKLIGMNC 248


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 240 PVKLIGMNC 248


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 PVGLIGMNC 9
PV LIGMNC
Sbjct: 240 PVKLIGMNC 248


>sp|NSP6_ROT41|NON-STRUCTURAL protein 6|Rotavirus A (isolate

Query: 4 LIGMNCI 10
L+GMNC+
Sbjct: 15 LVGMNCM 21


>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)

Query: 3 GLIGMNC 9
G+IGM+C
Sbjct: 1625 GIIGMHC 1631


>sp|VE6_HPV22|PROTEIN E6|Human papillomavirus 22

Query: 1 PVGLIGMNC 9
PVG I M C
Sbjct: 117 PVGQIYMRC 125


>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)

Query: 2 VGLIGMNC 9
VG++G++C
Sbjct: 380 VGILGISC 387


>sp|U21_HHV6U|GLYCOPROTEIN U21|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 VGLIGMNC 9
VG++G++C
Sbjct: 380 VGILGISC 387


>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)

Query: 1 PVGLIGMNC 9
P G +G+ C
Sbjct: 39 PKGTVGLQC 47


>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)

Query: 1 PVGLIGMNC 9
P G +G+ C
Sbjct: 39 PKGTVGLQC 47


>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)

Query: 1 PVGLIGMNC 9
P G +G+ C
Sbjct: 39 PKGTVGLQC 47


>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)

Query: 1 PVGLIGMNC 9
P G +G+ C
Sbjct: 39 PKGTVGLQC 47


>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)

Query: 1 PVGLIGMNC 9
P G +G+ C
Sbjct: 39 PKGTVGLQC 47


>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 VGLIGMNC 9
+GL+ M+C
Sbjct: 156 MGLVDMDC 163


>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 VGLIGMNC 9
+GL+ M+C
Sbjct: 156 MGLVDMDC 163


>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain

Query: 4 LIGMNCI 10
LIGM C+
Sbjct: 2173 LIGMLCV 2179


>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 570 PVNIIGRNIL 579


>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 568 PVNIIGRNIL 577


>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNIL 578


>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 570 PVNIIGRNLL 579


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 579 PVNIIGRNLL 588


>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNLL 578


>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 570 PVNIIGRNLL 579


>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 568 PVNIIGRNLL 577


>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 566 PVNIIGRNLL 575


>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNLL 578


>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 564 PVNIIGRNLL 573


>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 575 PVNIIGRNLL 584


>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNLL 578


>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 573 PVNIIGRNLL 582


>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNLL 578


>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNLL 578


>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 581 PVNIIGRNLL 590


>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 569 PVNIIGRNLL 578


>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 581 PVNIIGRNLL 590


>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 581 PVNIIGRNLL 590


>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 571 PVNIIGRNLL 580


>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 564 PVNIIGRNLL 573


>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong

Query: 1 PVGLIGMNCI 10
P+G+ CI
Sbjct: 289 PIGICSSECI 298


>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 563 PVNIIGRNML 572


>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 562 PVNIIGRNML 571


>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 566 PVNIIGRNML 575


>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 566 PVNIIGRNML 575


>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 574 PVNIIGRNML 583


>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 568 PVNIIGRNML 577


>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 573 PVNIIGRNML 582


>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 564 PVNIIGRNML 573


>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 564 PVNIIGRNML 573


>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMNCI 10
PV +IG N +
Sbjct: 565 PVNIIGRNML 574


>sp|UL41A_HCMVM|PROTEIN UL41A|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 VGLIGMNC 9
+G+IG+ C
Sbjct: 21 IGMIGVVC 28


>sp|UL41A_HCMVA|PROTEIN UL41A|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 VGLIGMNC 9
+G+IG+ C
Sbjct: 21 IGMIGVVC 28


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 PVGLIGMN 8
PV +IG N
Sbjct: 579 PVNIIGRN 586


>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 PVGLIGM 7
P GLIG+
Sbjct: 672 PEGLIGL 678


>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 PVGLIGM 7
P GLIG+
Sbjct: 672 PEGLIGL 678


>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1

Query: 1 PVGLIGM 7
P GLIG+
Sbjct: 672 PEGLIGL 678


>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain

Query: 3 GLIGMNCI 10
GLIG+N I
Sbjct: 421 GLIGINGI 428


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 1 PVGLIGMNC 9
P G +G NC
Sbjct: 6707 PQGNLGGNC 6715


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 1 PVGLIGMNC 9
P G +G NC
Sbjct: 6657 PQGNLGGNC 6665


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 1 PVGLIGMNC 9
P G +G NC
Sbjct: 6677 PQGNLGGNC 6685


>sp|NS1_HRSV|NON-STRUCTURAL protein 1|Human respiratory syncytial virus

Query: 1 PVGLIGMNC 9
P GLI NC
Sbjct: 101 PNGLIDDNC 109


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 4 LIGMNCI 10
L+G NC+
Sbjct: 51 LLGPNCV 57


>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka

Query: 3 GLIGMNCI 10
G+IG CI
Sbjct: 553 GIIGEYCI 560


>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)

Query: 3 GLIGMNCI 10
G+IG CI
Sbjct: 553 GIIGEYCI 560


>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 4 LIGMNC 9
L+G NC
Sbjct: 510 LVGSNC 515




56|Sequence|276|285|GMNCILMKQY

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 GMNCILMKQY 10
GMNC LMKQY
Sbjct: 250 GMNCDLMKQY 259


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 GMNCILMKQY 10
GMNC +MK Y
Sbjct: 245 GMNCEMMKTY 254


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 GMNCILMKQY 10
GMNC +MK Y
Sbjct: 245 GMNCEMMKTY 254


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 GMNCILMKQY 10
GMNC +MK Y
Sbjct: 245 GMNCEMMKTY 254


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 GMNCILMKQY 10
GMNC +MK Y
Sbjct: 245 GMNCEMMKTY 254


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 GMNCILMKQY 10
GMNC +MK Y
Sbjct: 245 GMNCEMMKTY 254


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 GMNCILMKQY 10
GMNC +MK Y
Sbjct: 245 GMNCEMMKTY 254


>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4

Query: 1 GMNCILMKQ 9
G+ CI+M++
Sbjct: 1488 GLECIIMEE 1496


>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New

Query: 1 GMNCI 5
GMNCI
Sbjct: 414 GMNCI 418


>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New

Query: 1 GMNCI 5
GMNCI
Sbjct: 414 GMNCI 418


>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)

Query: 3 NCILMKQY 10
+CI +K+Y
Sbjct: 702 SCIFLKRY 709


>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)

Query: 3 NCILMKQY 10
NCI QY
Sbjct: 104 NCIHQAQY 111


>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)

Query: 3 NCILMKQY 10
NCI QY
Sbjct: 104 NCIHQAQY 111


>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)

Query: 3 NCILMKQY 10
NCI QY
Sbjct: 104 NCIHQAQY 111


>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)

Query: 2 MNCILMKQY 10
+NC K+Y
Sbjct: 1454 VNCTFSKEY 1462


>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)

Query: 2 MNCILMKQY 10
+NC K+Y
Sbjct: 1454 VNCTFSKEY 1462


>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)

Query: 2 MNCILMKQY 10
+NC K+Y
Sbjct: 1454 VNCTFSKEY 1462


>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus

Query: 4 CILMKQY 10
C+L KQ+
Sbjct: 407 CVLNKQF 413


>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human

Query: 4 CILMKQY 10
C+L KQ+
Sbjct: 407 CVLNKQF 413


>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)

Query: 2 MNCILMKQY 10
MNC KQ+
Sbjct: 1 MNCFQEKQF 9


>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus

Query: 2 MNCILMKQY 10
MNC KQ+
Sbjct: 1 MNCFQEKQF 9


>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate

Query: 2 MNCILMKQY 10
MNC KQ+
Sbjct: 1 MNCFQEKQF 9


>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)

Query: 2 MNCILMKQY 10
MNC KQ+
Sbjct: 31 MNCFQEKQF 39




57|Sequence|281|290|LMKQYIEFVA

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 LMKQYIEFVA 10
LMKQYIEFVA
Sbjct: 255 LMKQYIEFVA 264


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 LMKQYIEFVA 10
+MK YIEFVA
Sbjct: 250 MMKTYIEFVA 259


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 LMKQYIEFVA 10
+MK YIEFVA
Sbjct: 250 MMKTYIEFVA 259


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 LMKQYIEFVA 10
+MK YIEFVA
Sbjct: 250 MMKTYIEFVA 259


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 LMKQYIEFVA 10
+MK YIEFVA
Sbjct: 250 MMKTYIEFVA 259


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 LMKQYIEFVA 10
+MK Y+EFVA
Sbjct: 250 MMKTYMEFVA 259


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 LMKQYIEFVA 10
+MK YI+FVA
Sbjct: 250 MMKTYIKFVA 259


>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain

Query: 1 LMKQYIEF 8
L+KQY+E
Sbjct: 1639 LLKQYLEL 1646


>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)

Query: 1 LMKQYIEFV 9
L+K+YI+F
Sbjct: 678 LLKEYIDFT 686


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 2 MKQYIEF 8
MKQ+I+F
Sbjct: 417 MKQWIKF 423


>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)

Query: 2 MKQYIEF 8
M+QYI+F
Sbjct: 700 MEQYIDF 706




58|Sequence|286|295|IEFVADRLLV

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 IEFVADRLLV 10
IEFVADRLL+
Sbjct: 260 IEFVADRLLL 269


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 IEFVADRLL 9
IEFVADRL+
Sbjct: 255 IEFVADRLI 263


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 IEFVADRLL 9
IEFVADRL+
Sbjct: 255 IEFVADRLI 263


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 IEFVADRLL 9
IEFVADRL+
Sbjct: 255 IEFVADRLI 263


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 IEFVADRLL 9
IEFVADRL+
Sbjct: 255 IEFVADRLI 263


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 IEFVADRLL 9
+EFVADRL+
Sbjct: 255 MEFVADRLI 263


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 IEFVADRLL 9
I+FVADRL+
Sbjct: 255 IKFVADRLI 263


>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain

Query: 1 IEFVADRLLV 10
+EF+ DR++V
Sbjct: 959 LEFIPDRIVV 968


>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus

Query: 1 IEFVADRLL 9
+EF DR+L
Sbjct: 2782 VEFYEDRIL 2790


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 1 IEFVADRLL 9
+EF DR+L
Sbjct: 2782 VEFYEDRIL 2790


>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)

Query: 1 IEFVADRLLV 10
++FV DR+ V
Sbjct: 611 VQFVKDRISV 620


>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)

Query: 1 IEFVADRLLV 10
++FV DR+ V
Sbjct: 611 VQFVKDRISV 620


>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)

Query: 1 IEFVADRLLV 10
++FV DR+ V
Sbjct: 611 VQFVKDRISV 620


>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2

Query: 4 VADRLL 9
VADRLL
Sbjct: 104 VADRLL 109


>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain

Query: 3 FVADRLL 9
F+ADR++
Sbjct: 1891 FIADRVI 1897


>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)

Query: 1 IEFVADRLL 9
++ +ADRLL
Sbjct: 313 LDVLADRLL 321


>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)

Query: 1 IEFVADRLL 9
++ +ADRLL
Sbjct: 313 LDVLADRLL 321




59|Sequence|291|300|DRLLVELGFS

>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 DRLLVELGF 9
DRL+ ELGF
Sbjct: 260 DRLISELGF 268


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 DRLLVELGF 9
DRL+ ELGF
Sbjct: 260 DRLISELGF 268


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 DRLLVELGF 9
DRL+ ELGF
Sbjct: 260 DRLISELGF 268


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 DRLLVELGF 9
DRL+ ELGF
Sbjct: 260 DRLISELGF 268


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 DRLLVELGF 9
DRL+ ELGF
Sbjct: 260 DRLISELGF 268


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 DRLLVELGF 9
DRL+ ELGF
Sbjct: 260 DRLISELGF 268


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 DRLLVELG 8
DRLL+ELG
Sbjct: 265 DRLLLELG 272


>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)

Query: 1 DRLLVELGFS 10
+RLL +LGFS
Sbjct: 63 NRLLDDLGFS 72


>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)

Query: 1 DRLLVELGFS 10
+RLL +LGFS
Sbjct: 63 NRLLDDLGFS 72


>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)

Query: 1 DRLLVELGFS 10
+RLL +LGFS
Sbjct: 61 NRLLDDLGFS 70


>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)

Query: 1 DRLLVELGFS 10
+RLL +LGFS
Sbjct: 61 NRLLDDLGFS 70


>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 LLVELGF 9
LLVE+GF
Sbjct: 822 LLVEVGF 828


>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 LVELGFS 10
LVELGF+
Sbjct: 383 LVELGFN 389


>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 LVELGFS 10
LVELGF+
Sbjct: 383 LVELGFN 389


>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)

Query: 2 RLLVELGFS 10
R LVE GF+
Sbjct: 2584 RWLVERGFA 2592


>sp|VPR_HV2BE|PROTEIN Vpr|Human immunodeficiency virus type 2

Query: 2 RLLVELGF 9
RLL+ LG+
Sbjct: 42 RLLIALGY 49


>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)

Query: 3 LLVELGF 9
LL+ LGF
Sbjct: 3 LLIRLGF 9


>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)

Query: 3 LLVELGF 9
LL+ LGF
Sbjct: 3 LLIRLGF 9


>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)

Query: 1 DRLLVELG 8
+RL+VE G
Sbjct: 1290 ERLIVETG 1297


>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)

Query: 1 DRLLVELG 8
+RL+VE G
Sbjct: 1290 ERLIVETG 1297


>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)

Query: 3 LLVELGF 9
LL+ LGF
Sbjct: 3 LLIRLGF 9




60|Sequence|296|305|ELGFSKVFQA

>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)

Query: 2 LGFSKVFQA 10
+GFS FQ+
Sbjct: 505 IGFSGTFQS 513


>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)

Query: 2 LGFSKVFQA 10
+GFS FQ+
Sbjct: 505 IGFSGTFQS 513


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 ELGFSKVF 8
ELGF K++
Sbjct: 265 ELGFKKIY 272


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 ELGFSKVF 8
ELGF K++
Sbjct: 265 ELGFKKIY 272


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 ELGFSKVF 8
ELGF K++
Sbjct: 265 ELGFKKIY 272


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 ELGFSKVF 8
ELGF K++
Sbjct: 265 ELGFKKIY 272


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 ELGFSKVF 8
ELGF K++
Sbjct: 265 ELGFKKIY 272


>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d

Query: 2 LGFSKVFQ 9
LGF+ +FQ
Sbjct: 397 LGFTGLFQ 404


>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 3 GFSKVFQA 10
GF KV+++
Sbjct: 112 GFEKVYES 119


>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann

Query: 3 GFSKVFQA 10
GF KV+++
Sbjct: 112 GFEKVYES 119


>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)

Query: 3 GFSKVFQA 10
GF KV+++
Sbjct: 112 GFEKVYES 119


>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)

Query: 3 GFSKVFQA 10
GF KV+++
Sbjct: 112 GFEKVYES 119




61|Sequence|301|310|KVFQAENPFD

>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 KVFQAENPFD 10
K++ NPFD
Sbjct: 270 KIYNVTNPFD 279


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 KVFQAENPFD 10
K++ NPFD
Sbjct: 270 KIYNVTNPFD 279


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KVFQAENPFD 10
K++ NPFD
Sbjct: 270 KIYNVTNPFD 279


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 KVFQAENPFD 10
K++ NPFD
Sbjct: 270 KIYNVTNPFD 279


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KVFQAENPFD 10
K++ NPFD
Sbjct: 270 KIYNVTNPFD 279


>sp|VE1_HPV66|REPLICATION protein E1|Human papillomavirus 66

Query: 2 VFQAENPF 9
VF+ ENPF
Sbjct: 566 VFKFENPF 573


>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 KVFQAENPF 9
+VF +NPF
Sbjct: 624 RVFNPKNPF 632


>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain

Query: 1 KVFQAENPF 9
+VF +NPF
Sbjct: 624 RVFNPKNPF 632


>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann

Query: 1 KVFQAENPF 9
+VF +NPF
Sbjct: 624 RVFNPKNPF 632


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 1 KVFQAENPF 9
KVF NPF
Sbjct: 582 KVFTFSNPF 590


>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)

Query: 1 KVFQAENP 8
KVF ENP
Sbjct: 1584 KVFPIENP 1591


>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41

Query: 2 VFQAENPFD 10
+ +AE+PFD
Sbjct: 19 LLEAEHPFD 27


>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33

Query: 2 VFQAENPF 9
VF+ +NPF
Sbjct: 578 VFEFKNPF 585


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 1 KVFQAENPF 9
+VF+ NPF
Sbjct: 584 QVFEFPNPF 592


>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58

Query: 2 VFQAENPF 9
VF+ NPF
Sbjct: 578 VFEFNNPF 585


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 2 VFQAENPF 9
VF+ NPF
Sbjct: 584 VFEFPNPF 591


>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73

Query: 1 KVFQAENPF 9
KVF NPF
Sbjct: 585 KVFTFLNPF 593


>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)

Query: 3 FQAENPF 9
++AE PF
Sbjct: 6173 YEAERPF 6179


>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 VFQAENP 8
+F+A+NP
Sbjct: 251 MFRAQNP 257


>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P

Query: 1 KVFQAENPF 9
KVF E+P
Sbjct: 166 KVFDPESPL 174


>sp|NSP1_ROT41|NON-STRUCTURAL protein 1|Rotavirus A (isolate

Query: 1 KVFQAENP 8
K+F A NP
Sbjct: 390 KLFNAMNP 397


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 VFQAENP 8
+F+A+NP
Sbjct: 251 MFRAQNP 257


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 2 VFQAENP 8
+F+A+NP
Sbjct: 251 MFRAQNP 257


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 KVFQAENPFD 10
K+F +NP D
Sbjct: 588 KMFFVKNPTD 597


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 2 VFQAENP 8
VF+AE P
Sbjct: 634 VFRAEQP 640


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 2 VFQAENP 8
VF+AE P
Sbjct: 634 VFRAEQP 640


>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2

Query: 2 VFQAENP 8
+F+A+NP
Sbjct: 251 MFRAQNP 257


>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12

Query: 2 VFQAENP 8
VFQ NP
Sbjct: 402 VFQCANP 408




62|Sequence|306|315|ENPFDFMENI

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 ENPFDFMENI 10
+NPFDFMENI
Sbjct: 280 KNPFDFMENI 289


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 2 NPFDFMENI 10
NPFDFMENI
Sbjct: 276 NPFDFMENI 284


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 NPFDFMENI 10
NPFDFMENI
Sbjct: 276 NPFDFMENI 284


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 2 NPFDFMENI 10
NPFDFMENI
Sbjct: 276 NPFDFMENI 284


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 NPFDFMENI 10
NPFDFMENI
Sbjct: 276 NPFDFMENI 284


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 2 NPFDFMENI 10
NPFDFMENI
Sbjct: 276 NPFDFMENI 284


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 NPFDFMENI 10
NP DFMENI
Sbjct: 276 NPSDFMENI 284


>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4

Query: 1 ENPFDF 6
+NPFDF
Sbjct: 507 QNPFDF 512


>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34

Query: 1 ENPFDFMENI 10
E P DF+ N+
Sbjct: 241 EGPLDFVHNL 250


>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5

Query: 1 ENPFDF 6
+NPFDF
Sbjct: 524 QNPFDF 529


>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2

Query: 1 ENPFDF 6
+NPFDF
Sbjct: 524 QNPFDF 529


>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7

Query: 1 ENPFDF 6
+NPFDF
Sbjct: 512 QNPFDF 517


>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 1 ENPFDFME 8
+NP DF+E
Sbjct: 448 KNPIDFVE 455


>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33

Query: 1 ENPFDFMEN 9
+NPF F EN
Sbjct: 582 KNPFPFDEN 590


>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52

Query: 1 ENPFDFMEN 9
+NPF F EN
Sbjct: 585 KNPFPFDEN 593


>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus

Query: 4 FDFMEN 9
FDF+EN
Sbjct: 4541 FDFVEN 4546


>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41

Query: 1 ENPFDFME 8
E+PFDF E
Sbjct: 23 EHPFDFPE 30


>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12

Query: 1 ENPFDF 6
E PFDF
Sbjct: 479 EEPFDF 484


>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P

Query: 1 ENPFDFME 8
E P DF E
Sbjct: 144 ETPLDFTE 151


>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain

Query: 1 ENPFDFME 8
+NP +F+E
Sbjct: 448 KNPIEFVE 455


>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain

Query: 1 ENPFDFME 8
+NP +F+E
Sbjct: 448 KNPIEFVE 455


>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 590 NPFPFDSN 597


>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 589 NPFPFDSN 596


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 FDFMEN 9
+DF+EN
Sbjct: 4532 YDFVEN 4537


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 4 FDFMEN 9
+DF+EN
Sbjct: 4532 YDFVEN 4537


>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like

Query: 3 PFDFM 7
PFD+M
Sbjct: 447 PFDYM 451


>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31

Query: 2 NPFDFMEN 9
NPF F +N
Sbjct: 570 NPFPFDKN 577


>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 591 NPFPFDRN 598


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 4 FDFMEN 9
+DF+EN
Sbjct: 4555 YDFVEN 4560


>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 591 NPFPFDRN 598


>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 588 NPFPFDRN 595


>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 588 NPFPFDSN 595


>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 591 NPFPFDRN 598


>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)

Query: 4 FDFMEN 9
+DF+EN
Sbjct: 4570 YDFVEN 4575


>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)

Query: 4 FDFMEN 9
+DF+EN
Sbjct: 4590 YDFVEN 4595


>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)

Query: 4 FDFMEN 9
+DF+EN
Sbjct: 4620 YDFVEN 4625


>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44

Query: 2 NPFDFMEN 9
NPF F N
Sbjct: 585 NPFPFDRN 592




63|Sequence|311|320|FMENISLEGK

>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 280 FMENISLEGK 289


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 280 FMENISLEGK 289


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 280 FMENISLEGK 289


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 280 FMENISLEGK 289


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 280 FMENISLEGK 289


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 280 FMENISLEGK 289


>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 FMENISLEGK 10
FMENISLEGK
Sbjct: 285 FMENISLEGK 294


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 FMENISLEG 9
F+E ISL G
Sbjct: 1501 FIETISLAG 1509


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FMENISLEG 9
F+E ISL G
Sbjct: 1501 FIETISLAG 1509


>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56

Query: 3 ENISLEGK 10
+NIS++GK
Sbjct: 179 DNISVDGK 186


>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)

Query: 1 FMENISLE 8
FM+NIS +
Sbjct: 457 FMKNISFD 464


>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 FMENISLE 8
FM+NIS +
Sbjct: 454 FMKNISFD 461


>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 FMENISLEG 9
F+E +SL G
Sbjct: 1477 FVETVSLAG 1485


>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 FMENISLEG 9
F+E +SL G
Sbjct: 1477 FVETVSLAG 1485


>sp|VC21_VACCC|PROTEIN C21/B27|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 FMENISLE 8
FM+NIS +
Sbjct: 98 FMKNISFD 105


>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain

Query: 1 FMENISLEGK 10
F+EN+S E K
Sbjct: 448 FVENVSEEQK 457


>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41

Query: 1 FMENISLEG 9
+ EN+S+E
Sbjct: 261 YAENVSIEA 269


>sp|PG065_VAR67|RNA-BINDING protein OPG065|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 MENISLEG 9
++NI LEG
Sbjct: 19 IKNIGLEG 26


>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain

Query: 1 FMENISLE 8
F EN+S+E
Sbjct: 617 FDENVSIE 624




64|Sequence|316|325|SLEGKTNFFE

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 290 SLEGKTNFFE 299


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 285 SLEGKTNFFE 294


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 285 SLEGKTNFFE 294


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 285 SLEGKTNFFE 294


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 285 SLEGKTNFFE 294


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 285 SLEGKTNFFE 294


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 SLEGKTNFFE 10
SLEGKTNFFE
Sbjct: 285 SLEGKTNFFE 294


>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)

Query: 2 LEGKTNF 8
L+GK+NF
Sbjct: 264 LKGKSNF 270


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 5 KTNFFE 10
+TNFFE
Sbjct: 283 QTNFFE 288


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 5 KTNFFE 10
+TNFFE
Sbjct: 283 QTNFFE 288


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 5 KTNFFE 10
+TNFFE
Sbjct: 283 QTNFFE 288


>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 LEGKTNF 8
L+GKT+F
Sbjct: 264 LKGKTSF 270


>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 LEGKTNF 8
L+GKT+F
Sbjct: 264 LKGKTSF 270


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 2 LEGKTNF 8
L+GKT+F
Sbjct: 264 LKGKTSF 270


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 6 TNFFE 10
TNFFE
Sbjct: 288 TNFFE 292


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 6 TNFFE 10
TNFFE
Sbjct: 288 TNFFE 292


>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)

Query: 2 LEGKTNFF 9
++GKT+F
Sbjct: 2070 IQGKTDFL 2077


>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549


>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 409 LRGKLSFWE 417


>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549


>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549


>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549


>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 540 LRGKLSFWE 548


>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549


>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 539 LRGKLSFWE 547


>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549


>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1

Query: 2 LEGKTNFFE 10
L GK +F+E
Sbjct: 541 LRGKLSFWE 549




65|Sequence|321|330|TNFFEKRVSE

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 TNFFEKRVSE 10
TNFFEKRVSE
Sbjct: 295 TNFFEKRVSE 304


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 TNFFEKRVSE 10
TNFFEKRV E
Sbjct: 290 TNFFEKRVGE 299


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 TNFFEKRVSE 10
TNFFEKRV E
Sbjct: 290 TNFFEKRVGE 299


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 TNFFEKRVSE 10
TNFFEKRV E
Sbjct: 290 TNFFEKRVGE 299


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 TNFFEKRVSE 10
TNFFEKRV E
Sbjct: 290 TNFFEKRVGE 299


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 TNFFEKRVSE 10
TNFFEKRV E
Sbjct: 290 TNFFEKRVGE 299


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 TNFFEKRVSE 10
TNFFEKRV E
Sbjct: 290 TNFFEKRVGE 299


>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)

Query: 2 NFFEKRVS 9
NFF+KR+S
Sbjct: 1279 NFFKKRIS 1286


>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain

Query: 3 FFEKRVSE 10
FF+KR+ E
Sbjct: 299 FFQKRIEE 306


>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)

Query: 1 TNFFEKRVS 9
TN+FE+ VS
Sbjct: 273 TNYFEQPVS 281


>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)

Query: 1 TNFFEKRVS 9
TN+FE+ VS
Sbjct: 273 TNYFEQPVS 281


>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)

Query: 1 TNFFEKRVS 9
TN+FE+ VS
Sbjct: 273 TNYFEQPVS 281


>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 TNFFEKRVSE 10
TNFFE+ S+
Sbjct: 284 TNFFEQESSD 293


>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 TNFFEKRVSE 10
TNFFE+ S+
Sbjct: 284 TNFFEQESSD 293


>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 TNFFEKRVSE 10
TNFFE+ S+
Sbjct: 284 TNFFEQESSD 293


>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)

Query: 2 NFFEKRVS 9
+FFEK+ S
Sbjct: 900 SFFEKKAS 907


>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)

Query: 2 NFFEKRV 8
NF EK+V
Sbjct: 1143 NFLEKQV 1149


>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)

Query: 1 TNFFEK 6
TNFFE+
Sbjct: 288 TNFFER 293


>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)

Query: 1 TNFFEK 6
TNFFE+
Sbjct: 288 TNFFER 293


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 NFFEKRVS 9
NF +KR+S
Sbjct: 1211 NFCKKRIS 1218


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 2 NFFEKRVS 9
NF +KR+S
Sbjct: 1225 NFCKKRIS 1232


>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P

Query: 1 TNFFEKR 7
T FF KR
Sbjct: 406 TGFFRKR 412


>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)

Query: 2 NFFEKRV 8
N FEK++
Sbjct: 470 NMFEKKI 476




66|Sequence|326|335|KRVSEYQRFA

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 1 KRVSEYQRFA 10
KRVSEYQ+ +
Sbjct: 300 KRVSEYQKMS 309


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 1 KRVSEYQRFA 10
KRV EYQ+
Sbjct: 295 KRVGEYQKMG 304


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 1 KRVSEYQRFA 10
KRV EYQ+
Sbjct: 295 KRVGEYQKMG 304


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 1 KRVSEYQRFA 10
KRV EYQ+
Sbjct: 295 KRVGEYQKMG 304


>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)

Query: 3 VSEYQRF 9
VSE+QRF
Sbjct: 655 VSEFQRF 661


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 KRVSEYQRFA 10
KRV EYQ+
Sbjct: 295 KRVGEYQKMG 304


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 1 KRVSEYQRFA 10
KRV EYQ+
Sbjct: 295 KRVGEYQKMG 304


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 1 KRVSEYQRFA 10
KRV EYQ+
Sbjct: 295 KRVGEYQKMG 304


>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)

Query: 3 VSEYQRF 9
VSE+QRF
Sbjct: 660 VSEFQRF 666


>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)

Query: 3 VSEYQRF 9
VSE+QRF
Sbjct: 660 VSEFQRF 666


>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)

Query: 3 VSEYQRF 9
VSE+Q+F
Sbjct: 660 VSEFQKF 666


>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P

Query: 2 RVSEYQRFA 10
R+S Y +FA
Sbjct: 413 RLSNYSQFA 421




67|Sequence|331|340|YQRFAVMAET

>sp|NSP2_ROTAD|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219


>sp|NSP2_ROTWI|NON-STRUCTURAL protein 2|Rotavirus A (isolate RVA/Human/United

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219


>sp|NSP2_ROTHT|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219


>sp|NSP2_ROTHP|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219


>sp|NSP2_ROTHK|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219


>sp|NSP2_ROTHW|NON-STRUCTURAL protein 2|Rotavirus A (strain RVA/Human/United

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219


>sp|NSP2_ROTHL|NON-STRUCTURAL protein 2|Rotavirus A (strain

Query: 1 YQRFAVM 7
Y RFAV+
Sbjct: 213 YNRFAVI 219




68|Sequence|336|345|VMAETTDNVF

>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)

Query: 3 AETTDNV 9
AETT+N+
Sbjct: 1928 AETTENI 1934


>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)

Query: 3 AETTDNV 9
AETT+N+
Sbjct: 1928 AETTENI 1934


>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United

Query: 5 TTDNVF 10
TTDNVF
Sbjct: 438 TTDNVF 443


>sp|BALF1_EBVG|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 3 AETTDNVF 10
A++TD+VF
Sbjct: 42 AKSTDSVF 49


>sp|BALF1_EBVB9|APOPTOSIS regulator BALF1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 3 AETTDNVF 10
A++TD+VF
Sbjct: 42 AKSTDSVF 49


>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)

Query: 3 AETTDNV 9
AETT+N+
Sbjct: 1925 AETTENL 1931


>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)

Query: 3 AETTDNV 9
AETT+N+
Sbjct: 1925 AETTENL 1931


>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)

Query: 3 AETTDNV 9
AETT+N+
Sbjct: 1926 AETTENL 1932


>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)

Query: 3 AETTDNV 9
AETT+N+
Sbjct: 1926 AETTENL 1932


>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)

Query: 2 MAETTDNVF 10
+A+TTD F
Sbjct: 85 LADTTDKKF 93




69|Sequence|341|351|TDNVFTLDADF

>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)

Query: 2 DNVFTLDADF 11
DNVF+LD DF
Sbjct: 316 DNVFSLDIDF 325


>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)

Query: 2 DNVFTLDADF 11
DN F+LD DF
Sbjct: 310 DNHFSLDVDF 319


>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)

Query: 2 DNVFTLDADF 11
DN F+LD DF
Sbjct: 310 DNHFSLDVDF 319


>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus

Query: 2 DNVFTLDADF 11
DN F+LD DF
Sbjct: 310 DNHFSLDVDF 319


>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)

Query: 2 DNVFTLDADF 11
DN F+LD DF
Sbjct: 310 DNHFSLDVDF 319


>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)

Query: 2 DNVFTLDADF 11
DN F+LD DF
Sbjct: 310 DNHFSLDVDF 319


>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)

Query: 2 DNVFTLDADF 11
DN F+LD DF
Sbjct: 310 DNHFSLDVDF 319


>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5

Query: 4 VFTLDAD 10
VFT+DAD
Sbjct: 738 VFTVDAD 744


>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2

Query: 4 VFTLDAD 10
VFT+DAD
Sbjct: 738 VFTVDAD 744


>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40

Query: 4 VFTLDAD 10
+FT+DAD
Sbjct: 729 IFTIDAD 735


>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12

Query: 4 VFTLDAD 10
+FT+DAD
Sbjct: 602 IFTIDAD 608


>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7

Query: 4 VFTLDAD 10
+FT+DAD
Sbjct: 662 IFTIDAD 668


>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4

Query: 4 VFTLDAD 10
+FT+DAD
Sbjct: 733 IFTIDAD 739


>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus

Query: 1 TDNVFTLDAD 10
TDNV+ +AD
Sbjct: 1035 TDNVYIKNAD 1044


>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)

Query: 1 TDNVFTLDAD 10
T+N F +D D
Sbjct: 923 TNNSFVVDGD 932


>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French

Query: 1 TDNVFTLDAD 10
T+N F +D D
Sbjct: 923 TNNSFVVDGD 932


>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)

Query: 1 TDNVFTLDAD 10
T+N F +D D
Sbjct: 919 TNNSFVVDGD 928


>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)

Query: 2 DNVFTLDAD 10
D+V+ LD+D
Sbjct: 803 DDVYQLDSD 811


>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus

Query: 1 TDNVFTLDADF 11
TDNV+ +AD
Sbjct: 1035 TDNVYIKNADI 1045


>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)

Query: 2 DNVFTLDAD 10
D+V+ LD+D
Sbjct: 804 DHVYQLDSD 812


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 2 DNVFTLDAD 10
D ++TL+AD
Sbjct: 306 DYLYTLNAD 314


>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain

Query: 2 DNVFTLDA 9
DN TLD+
Sbjct: 321 DNTITLDS 328


>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27

Query: 1 TDNVFTLDA 9
T+N TLD+
Sbjct: 238 TENAHTLDS 246


>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)

Query: 2 DNVFTLD 8
DNV T+D
Sbjct: 268 DNVITID 274


>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)

Query: 2 DNVFTLD 8
DNV T+D
Sbjct: 268 DNVITID 274






THE END