RIR2B_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|AAEPREPDGM

>sp|RSMA_HALWD|PROBABLE ribosomal RNA small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AEPREPD 8
AEPR+PD
Sbjct: 214 AEPRDPD 220


>sp|SYC_HALMA|CYSTEINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 EPREPDGM 10
EPR+PD +
Sbjct: 17 EPRDPDSV 24


>sp|Y920_THESM|UPF0200 protein TSIB_0920|Thermococcus sibiricus (strain DSM 12597

Query: 4 PREPDGM 10
PR P+GM
Sbjct: 44 PRTPEGM 50


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 5 REPDGM 10
REPDG+
Sbjct: 487 REPDGI 492


>sp|COFE_METTH|COENZYME F420:L-glutamate ligase|Methanothermobacter thermautotrophicus

Query: 4 PREPDG 9
PR+PDG
Sbjct: 128 PRDPDG 133


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EPREPDGM 10
EP+ P+G+
Sbjct: 18 EPKPPEGL 25




2|SequenceR|15|6|DQDLGAAEPR

>sp|FAU1_HALSA|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DQDLGAAEP 9
D DLGAAEP
Sbjct: 38 DADLGAAEP 46


>sp|FAU1_HALS3|PROBABLE ribonuclease FAU-1|Halobacterium salinarum (strain ATCC 29341

Query: 1 DQDLGAAEP 9
D DLGAAEP
Sbjct: 38 DADLGAAEP 46


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 QDLGAAEP 9
QD+G EP
Sbjct: 242 QDMGVIEP 249


>sp|RS8_CALMQ|SMALL ribosomal subunit protein uS8|Caldivirga maquilingensis (strain

Query: 3 DLGAAEPR 10
D+GA +PR
Sbjct: 71 DIGAIKPR 78


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 3 DLGAAEP 9
DLGA+EP
Sbjct: 218 DLGASEP 224


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 2 QDLGAAEP 9
Q+LG AEP
Sbjct: 193 QELGFAEP 200


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QDLGAAEPR 10
++LG EPR
Sbjct: 186 RELGGGEPR 194


>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 3 DLGAAEP 9
D+G AEP
Sbjct: 859 DMGVAEP 865




3|SequenceR|20|11|SSSREDQDLG

>sp|AROD_METAC|3-DEHYDROQUINATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSSREDQD 8
S+SRED+D
Sbjct: 110 SASREDRD 117


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 EDQDLG 10
EDQDLG
Sbjct: 3 EDQDLG 8




4|SequenceR|25|16|SENTDSSSRE

>sp|TVOK_THEVO|CALCIUM-GATED potassium channel TvoK|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SENTDSSSR 9
SENTD+S +
Sbjct: 151 SENTDNSEK 159




5|SequenceR|30|21|NSKIESENTD

***** No hits found ******


6|SequenceR|35|26|LLPEENSKIE

>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 1 LLPEENSKI 9
L PEEN KI
Sbjct: 100 LTPEENGKI 108


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 PEENSKI 9
PEENSK+
Sbjct: 412 PEENSKL 418


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLPEENSK 8
LLPEEN K
Sbjct: 767 LLPEENMK 774


Query: 1 LLPEENSKIE 10
+LPEEN+ E
Sbjct: 149 ILPEENTLTE 158


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 4 EENSKIE 10
EEN KIE
Sbjct: 116 EENGKIE 122


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 4 EENSKIE 10
EEN KIE
Sbjct: 116 EENGKIE 122


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LLPEENSKI 9
+LPEE+S++
Sbjct: 231 VLPEEDSQV 239


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LPEENSKI 9
LPEE+SK+
Sbjct: 315 LPEESSKL 322


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLPEENSKI 9
+LPEE+ KI
Sbjct: 1 MLPEEDLKI 9


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC

Query: 1 LLPEENSKI 9
+LPEE+ KI
Sbjct: 1 MLPEEDLKI 9


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 1 LLPEENSKI 9
+LPEE+ KI
Sbjct: 1 MLPEEDLKI 9


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PEENSKI 9
PEEN+K+
Sbjct: 412 PEENAKL 418




7|SequenceR|40|31|RSSKRLLPEE

>sp|KHSE_THEKO|HOMOSERINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RSSKRLLPE 9
R ++R+LPE
Sbjct: 172 REARRILPE 180


>sp|MDH_METBF|MALATE dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RSSKRLLP 8
++SKR+LP
Sbjct: 241 KNSKRILP 248


>sp|RNH2_PYRNV|RIBONUCLEASE HII|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RSSKRLLPE 9
R SKRL PE
Sbjct: 38 RDSKRLSPE 46


>sp|SPT5_THEKO|TRANSCRIPTION elongation factor Spt5|Thermococcus kodakarensis (strain ATCC

Query: 1 RSSKRLLPEE 10
R +KR+LP E
Sbjct: 65 RHAKRVLPGE 74


>sp|COFG_METB6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoregula boonei (strain DSM 21154

Query: 3 SKRLLPEE 10
++R+LPEE
Sbjct: 229 ARRILPEE 236


>sp|RLMN_NITMS|RIBOSOMAL RNA large subunit methyltransferase|Nitrosopumilus maritimus

Query: 5 RLLPEE 10
RLLPEE
Sbjct: 6 RLLPEE 11




8|SequenceR|45|36|FIVFRRSSKR

***** No hits found ******


9|SequenceR|50|41|PYQIPFIVFR

>sp|ENDA_NATPD|TRNA-SPLICING endonuclease|Natronomonas pharaonis (strain ATCC 35678

Query: 4 IPFIVFR 10
+PF+V+R
Sbjct: 70 VPFLVYR 76


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 1 PYQIPFIVFR 10
PY+ F+ FR
Sbjct: 76 PYEPGFLAFR 85


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 3 QIPFIVF 9
Q+PFIV+
Sbjct: 143 QLPFIVY 149


>sp|GGGPS_SACS2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|GGGPS_SACI7|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|GGGPS_SACI3|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.27)

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|GGGPS_SACI2|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|GGGPS_SACI1|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|GGGPS_SACI6|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|GGGPS_SACI4|GERANYLGERANYLGLYCERYL phosphate synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 YQIPFIVF 9
Y+IP I+F
Sbjct: 82 YEIPKIIF 89


>sp|TBP_SACSH|TATA-BOX-BINDING protein|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PYQIPFIVFR 10
P Q P ++FR
Sbjct: 134 PEQFPGLIFR 143


>sp|TBP_SACS2|TATA-BOX-BINDING protein|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PYQIPFIVFR 10
P Q P ++FR
Sbjct: 134 PEQFPGLIFR 143




10|SequenceR|55|46|MKWIDPYQIP

>sp|Y2966_METMA|UPF0282 protein MM_2966|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MKWIDPYQIP 10
MK DPYQ+P
Sbjct: 81 MKAEDPYQLP 90


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 4 IDPYQIP 10
+DPY+IP
Sbjct: 506 LDPYKIP 512


>sp|PUR2_PYRHO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KWIDPYQIP 10
KWID Y P
Sbjct: 133 KWIDEYGKP 141


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19

Query: 2 KWIDPYQIP 10
+W+DP + P
Sbjct: 58 RWLDPEETP 66


>sp|FLPA_METMJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanoculleus marisnigri (strain

Query: 1 MKWIDPYQ 8
++W+DPY
Sbjct: 181 VRWLDPYH 188


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IDPYQIP 10
+DPY+IP
Sbjct: 813 LDPYRIP 819


>sp|RL19E_METJA|LARGE ribosomal subunit protein eL19|Methanocaldococcus jannaschii

Query: 3 WIDPYQI 9
WIDP Q+
Sbjct: 25 WIDPTQL 31


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MKWIDP 6
M WIDP
Sbjct: 1 MAWIDP 6


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 KWIDPYQIP 10
+W+ PY IP
Sbjct: 326 EWLLPYDIP 334


>sp|RL19E_THEKO|LARGE ribosomal subunit protein eL19|Thermococcus kodakarensis (strain

Query: 3 WIDPYQI 9
WIDP +I
Sbjct: 23 WIDPERI 29


>sp|RL19E_PYRFU|LARGE ribosomal subunit protein eL19|Pyrococcus furiosus (strain ATCC

Query: 3 WIDPYQI 9
WIDP +I
Sbjct: 23 WIDPERI 29


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 MKWIDPYQ 8
M W DPY+
Sbjct: 144 MDWDDPYK 151


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 3 WIDPYQIP 10
W+ PY+ P
Sbjct: 285 WLGPYREP 292


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 MKWIDPYQ 8
M W DPY+
Sbjct: 144 MDWDDPYK 151


>sp|PPM_THEKO|PHOSPHOPENTOMUTASE kodakarensis (strain ATCC BAA-918

Query: 3 WIDPY 7
WIDP+
Sbjct: 324 WIDPF 328


>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 MKWIDP 6
++WIDP
Sbjct: 154 IEWIDP 159


>sp|RL19E_PYRHO|LARGE ribosomal subunit protein eL19|Pyrococcus horikoshii (strain ATCC

Query: 3 WIDPYQI 9
WIDP ++
Sbjct: 23 WIDPEKV 29


>sp|RL19E_PYRAB|LARGE ribosomal subunit protein eL19|Pyrococcus abyssi (strain GE5 /

Query: 3 WIDPYQI 9
WIDP ++
Sbjct: 23 WIDPERV 29


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 MKWIDP 6
M+W DP
Sbjct: 447 MQWFDP 452


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MKWIDPY 7
M W DPY
Sbjct: 142 MNWDDPY 148


>sp|RL19E_METTH|LARGE ribosomal subunit protein eL19|Methanothermobacter

Query: 3 WIDPYQI 9
WIDP +I
Sbjct: 22 WIDPERI 28


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter

Query: 1 MKWIDPYQIP 10
++W+ P +IP
Sbjct: 53 IEWLKPSEIP 62


>sp|KTHY_METKA|PROBABLE thymidylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 MKWIDPY 7
++W DPY
Sbjct: 48 LEWDDPY 54


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 MKWIDPY 7
M W DPY
Sbjct: 144 MDWDDPY 150


>sp|DNLI_CALMQ|DNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 IDPYQIP 10
++PY+IP
Sbjct: 506 LEPYKIP 512


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 MKWIDPY 7
M W DPY
Sbjct: 144 MDWDDPY 150


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MKWIDPY 7
++W DPY
Sbjct: 142 LQWPDPY 148


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 MKWIDPY 7
M W DPY
Sbjct: 144 MDWDDPY 150


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KWIDPYQ 8
KWI+ YQ
Sbjct: 68 KWIEDYQ 74


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 DPYQIP 10
DPY IP
Sbjct: 105 DPYSIP 110


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KWIDPYQIP 10
+W PY IP
Sbjct: 326 EWNLPYDIP 334


>sp|Y642_METJA|UNCHARACTERIZED protein MJ0642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KWIDPYQIP 10
KW+D IP
Sbjct: 129 KWLDKNNIP 137


>sp|SYFA_PYRHO|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KWIDPYQI 9
+W D YQ+
Sbjct: 285 EWTDTYQL 292


>sp|SYFA_PYRAB|PHENYLALANINE--TRNA ligase alpha subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 KWIDPYQI 9
+W D YQ+
Sbjct: 286 EWTDTYQL 293




11|SequenceR|60|51|QAQKYMKWID

>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QAQKYMKWI 9
+ ++Y+KWI
Sbjct: 108 EGEEYVKWI 116


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 AQKYMKW 8
A+KYM W
Sbjct: 76 AEKYMLW 82


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 AQKYMKWID 10
AQ++ WID
Sbjct: 100 AQRFKVWID 108


>sp|Y3510_METJA|UNCHARACTERIZED protein MJECL10|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QKYMKWI 9
QKY KWI
Sbjct: 210 QKYNKWI 216


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 5 YMKWID 10
Y+KWID
Sbjct: 274 YIKWID 279


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 KYMKWID 10
KY+ WID
Sbjct: 153 KYVYWID 159


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 KYMKWID 10
KY+ WID
Sbjct: 158 KYVYWID 164


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 2 AQKYMKW 8
A+KY++W
Sbjct: 76 AEKYIRW 82


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 KYMKWID 10
KY+ WID
Sbjct: 153 KYVYWID 159


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 KYMKWID 10
KY+ WID
Sbjct: 153 KYVYWID 159


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 QKYMKW 8
+KYM W
Sbjct: 510 EKYMSW 515


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AQKYMKWID 10
A+KY K++D
Sbjct: 283 AEKYAKYLD 291


>sp|PGK2_THEKO|2-PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AQKYMKWID 10
A+KY+K +D
Sbjct: 236 AEKYVKHVD 244


>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QAQKYMKWID 10
+ Q Y++WI+
Sbjct: 72 EEQHYIEWIE 81




12|SequenceR|65|56|TWFSAQAQKY

***** No hits found ******


13|SequenceR|70|61|DVEEATWFSA

>sp|SPSS_METAC|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DVEEATWFSA 10
+VE A WFSA
Sbjct: 287 EVENARWFSA 296


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVEEATWFSA 10
+VE A WFSA
Sbjct: 287 EVENARWFSA 296


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DVEEATWFSA 10
+VE A WFS+
Sbjct: 287 EVENARWFSS 296


>sp|SPSS_METTP|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DVEEATWFSA 10
+V++A WFS+
Sbjct: 286 EVDKARWFSS 295


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVEEATWFS 9
DVE+ WF+
Sbjct: 116 DVEKLKWFA 124


>sp|NADE_STAMF|NH(3)-DEPENDENT NAD(+) synthetase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DVEEATWF 8
D+E+A W
Sbjct: 77 DIEDALWL 84


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 1 DVEEATW 7
DVE+A W
Sbjct: 265 DVEKAVW 271


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 4 EATWFS 9
E+TWFS
Sbjct: 91 ESTWFS 96


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 DVEEATW 7
DVE+A W
Sbjct: 264 DVEKAVW 270


>sp|SPSS2_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVEEATWF 8
+VE+A WF
Sbjct: 287 EVEKARWF 294


>sp|RNP2_HALSA|RIBONUCLEASE P protein component 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 DVEEATWFSA 10
D + A WF+A
Sbjct: 31 DFQRALWFAA 40


>sp|RNP2_HALS3|RIBONUCLEASE P protein component 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 DVEEATWFSA 10
D + A WF+A
Sbjct: 31 DFQRALWFAA 40




14|SequenceR|75|66|LDKSLDVEEA

>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 1 LDKSLDVEE 9
LD++LDV E
Sbjct: 110 LDRTLDVPE 118


>sp|GRPE_HALSA|PROTEIN GrpE|Halobacterium salinarum (strain ATCC 700922

Query: 1 LDKSLDVEEA 10
LD++LD EE+
Sbjct: 125 LDRALDQEES 134


>sp|GRPE_HALS3|PROTEIN GrpE|Halobacterium salinarum (strain ATCC 29341

Query: 1 LDKSLDVEEA 10
LD++LD EE+
Sbjct: 125 LDRALDQEES 134




15|SequenceR|80|71|KNWHPLDKSL

>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 NWHPLDKSL 10
+W PL KSL
Sbjct: 703 HWEPLPKSL 711


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 KNWHPLDK 8
K W PL+K
Sbjct: 758 KGWKPLEK 765


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NWHPLDKSL 10
NW P D +L
Sbjct: 12 NWEPRDPAL 20


>sp|DNAG_SULTO|DNA primase DnaG|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNWHPLDK 8
+NW+P+++
Sbjct: 331 ENWNPIER 338


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNWHP 5
K WHP
Sbjct: 29 KKWHP 33


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KNWHP 5
K WHP
Sbjct: 29 KKWHP 33


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 3 WHPLDKSL 10
W P D+SL
Sbjct: 80 WRPEDESL 87


>sp|Y657_ARCFU|UNCHARACTERIZED protein AF_0657|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KNWHPLDKS 9
K+W PL+++
Sbjct: 42 KSWIPLERA 50


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KNWHPLD 7
K W P+D
Sbjct: 111 KRWRPVD 117


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 WHPLD 7
W+PLD
Sbjct: 589 WYPLD 593


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WHPLDKSL 10
W P+DK L
Sbjct: 200 WKPVDKKL 207


>sp|SYK_METMI|LYSINE--TRNA ligase|Methanococcus maripaludis (Methanococcus deltae)

Query: 2 NWHPLD 7
NW+PL+
Sbjct: 163 NWYPLN 168


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 WHPLD 7
W+PLD
Sbjct: 589 WYPLD 593


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 WHPLD 7
W+PLD
Sbjct: 589 WYPLD 593


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 3 WHPLD 7
W+PLD
Sbjct: 571 WYPLD 575


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 2 NWHPLDKSL 10
NW P DK +
Sbjct: 167 NWRPGDKGI 175


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 WHPLD 7
W+PLD
Sbjct: 588 WYPLD 592


>sp|ASSY_SULTO|ARGININOSUCCINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNWHPLDK 8
K W+P D+
Sbjct: 362 KGWYPTDE 369


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KNWHPLDK 8
+ W PLD+
Sbjct: 16 QEWRPLDE 23


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KNWHPLDKSL 10
+ W+PLD L
Sbjct: 558 RYWYPLDWRL 567


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNWHPLD 7
K W+P+D
Sbjct: 574 KYWYPVD 580


>sp|RS4E_SACI7|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 4 HPLDKSL 10
HP++KS+
Sbjct: 31 HPIEKSI 37


>sp|RS4E_SACI6|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 4 HPLDKSL 10
HP++KS+
Sbjct: 31 HPIEKSI 37


>sp|RS4E_SACI4|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 4 HPLDKSL 10
HP++KS+
Sbjct: 31 HPIEKSI 37


>sp|RS4E_SACI3|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 4 HPLDKSL 10
HP++KS+
Sbjct: 31 HPIEKSI 37


>sp|RS4E_SACI2|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 4 HPLDKSL 10
HP++KS+
Sbjct: 31 HPIEKSI 37


>sp|RS4E_SACI1|SMALL ribosomal subunit protein eS4|Saccharolobus islandicus (strain

Query: 4 HPLDKSL 10
HP++KS+
Sbjct: 31 HPIEKSI 37


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WHPLDKSL 10
W+P +KS+
Sbjct: 730 WNPFNKSI 737




16|SequenceR|85|76|EDAKLKNWHP

>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5

Query: 4 KLKNWH 9
KLKNWH
Sbjct: 94 KLKNWH 99


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 KLKNWH 9
KLKNWH
Sbjct: 94 KLKNWH 99


>sp|SERK_DESM0|ATP-DEPENDENT L-serine kinase|Desulfurococcus mucosus (strain ATCC 35584

Query: 1 EDAKLKNWHP 10
+D KLK W P
Sbjct: 101 QDVKLKTWLP 110


>sp|SERK_STAMF|ATP-DEPENDENT L-serine kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EDAKLKNWHP 10
E+ KLK W+P
Sbjct: 100 ENVKLKTWYP 109


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 3 AKLKNWH 9
KLKNWH
Sbjct: 102 VKLKNWH 108


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 4 KLKNWH 9
KLK+WH
Sbjct: 96 KLKDWH 101


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 EDAKLKNW 8
EDA LK+W
Sbjct: 906 EDALLKSW 913


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila

Query: 1 EDAKLKNWH 9
E AK+K W+
Sbjct: 10 ERAKVKQWY 18


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 1 EDAKLKNW 8
EDAKLK +
Sbjct: 328 EDAKLKGY 335


>sp|TRUD_ARCFU|PROBABLE tRNA pseudouridine synthase D|Archaeoglobus fulgidus (strain ATCC

Query: 2 DAKLKNW 8
D KLK W
Sbjct: 332 DTKLKGW 338


>sp|TYSY_METBF|PUTATIVE thymidylate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KLKNWH 9
+L+NWH
Sbjct: 94 RLRNWH 99


>sp|SERK_DESA1|ATP-DEPENDENT L-serine kinase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 DAKLKNWHP 10
+ KLK W P
Sbjct: 102 EVKLKTWLP 110


>sp|Y558_METJA|UNCHARACTERIZED protein MJ0558|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KLKNW 8
KLKNW
Sbjct: 68 KLKNW 72


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDAKLKNW 8
EDAK NW
Sbjct: 641 EDAKKYNW 648


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 EDAKLKNWHP 10
ED KL +++P
Sbjct: 163 EDGKLMDYYP 172


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EDAKLKNWHP 10
+D K+ W+P
Sbjct: 95 DDVKVYTWYP 104


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 3 AKLKNWHP 10
+ +KNW P
Sbjct: 206 SDVKNWRP 213


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DAKLKNW 8
DA++K W
Sbjct: 72 DARIKTW 78


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 1 EDAKLKNW 8
E+A LK+W
Sbjct: 904 EEALLKSW 911




17|SequenceR|90|81|SIFYKEDAKL

>sp|Y334_ARCFU|UNCHARACTERIZED protein AF_0334|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SIFYKEDAKL 10
+IFY EDA +
Sbjct: 29 TIFYSEDADV 38


>sp|RL15_THEKO|LARGE ribosomal subunit protein uL15|Thermococcus kodakarensis (strain

Query: 2 IFYKEDAKL 10
I Y+ED KL
Sbjct: 93 IIYEEDGKL 101


>sp|ILVC_METAR|KETOL-ACID reductoisomerase (NADP(+))|Methanocella arvoryzae (strain DSM

Query: 1 SIFYKEDAKL 10
+I+Y++DA L
Sbjct: 3 TIYYEKDADL 12


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 4 YKEDAKL 10
YK DAKL
Sbjct: 24 YKTDAKL 30


>sp|IF2P_METST|PROBABLE translation initiation factor IF-2|Methanosphaera stadtmanae

Query: 1 SIFYKEDAK 9
SI Y+ED K
Sbjct: 396 SIMYEEDEK 404


>sp|Y807_METJA|PUTATIVE lyase MJ0807|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IFYKEDAKL 10
I YKE AKL
Sbjct: 12 IIYKEIAKL 20


>sp|MSRA_METBU|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcoides burtonii

Query: 1 SIFYKEDAK 9
+IFY +DA+
Sbjct: 96 AIFYHDDAQ 104




18|SequenceR|95|86|FALIHSIFYK

>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 1 FALIHSIFY 9
+AL H++FY
Sbjct: 269 YALSHALFY 277




19|SequenceR|100|91|DSAAFFALIH

>sp|Y1394_ARCFU|UNCHARACTERIZED protein AF_1394|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SAAFFALIH 10
+AAF+ALIH
Sbjct: 104 AAAFYALIH 112


>sp|UPPP_KORCO|UNDECAPRENYL-DIPHOSPHATASE cryptofilum (strain OPF8)

Query: 1 DSAAFFALIH 10
SAAF AL+H
Sbjct: 38 SSAAFIALVH 47


>sp|MEND_HALMA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SAAFFAL 8
SAAFFAL
Sbjct: 57 SAAFFAL 63


>sp|MEND_NATPD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 SAAFFAL 8
SAAFFAL
Sbjct: 57 SAAFFAL 63


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SAAFFAL 8
SAAFFAL
Sbjct: 57 SAAFFAL 63


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SAAFFAL 8
SAAFFAL
Sbjct: 57 SAAFFAL 63




20|SequenceR|105|96|ENVIGDSAAF

>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ENVIGDSAAF 10
EN++GD F
Sbjct: 283 ENIVGDDLTF 292


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENVIGDSAAF 10
EN++GD F
Sbjct: 280 ENIVGDDLVF 289


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ENVIGDSAAF 10
EN++GD F
Sbjct: 285 ENIVGDDLVF 294


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 ENVIGDSAAF 10
EN++GD F
Sbjct: 280 ENIVGDDLVF 289


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 ENVIGDSAAF 10
EN++GD F
Sbjct: 283 ENIVGDDLTF 292


>sp|LYSZ_SACS2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|LYSZ_SACI7|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|LYSZ_SACI6|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|LYSZ_SACI4|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|LYSZ_SACI3|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|LYSZ_SACI2|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|LYSZ_SACI1|[LYSW]-AMINOADIPATE/[LYSW]-GLUTAMATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NVIGDSAAF 10
N+ GD AAF
Sbjct: 167 NIDGDQAAF 175


>sp|GGR2_METST|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 VIGDSAAF 10
V+GD+A F
Sbjct: 277 VVGDAAGF 284




21|SequenceR|110|101|REVLNENVIG

>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I

Query: 1 REVLNENVI 9
+EVLNE+V+
Sbjct: 68 KEVLNEDVV 76


>sp|Y1225_METJA|UNCHARACTERIZED protein MJ1225|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REVLNENVI 9
RE++ ENVI
Sbjct: 87 REIMEENVI 95


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 REVLNENVIG 10
RE++ EN+ G
Sbjct: 413 REMMRENIAG 422


>sp|MTMC2_METAC|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EVLNENVI 9
+VLNENV+
Sbjct: 130 DVLNENVV 137


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EVLNENVI 9
E++NEN +
Sbjct: 816 EIINENTV 823


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 3 VLNENVIG 10
+ NENV+G
Sbjct: 165 IANENVVG 172


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EVLNENVIG 10
EV NE ++G
Sbjct: 103 EVTNEEILG 111


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVLNENVIG 10
EV NE ++G
Sbjct: 103 EVTNEEILG 111


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EVLNENVIG 10
EV NE ++G
Sbjct: 103 EVTNEEILG 111


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 2 EVLNENVI 9
+VLNENV+
Sbjct: 130 DVLNENVV 137


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 REVLNENVIG 10
RE+L + VIG
Sbjct: 186 RELLGDEVIG 195


>sp|SMC_METJA|CHROMOSOME partition protein Smc|Methanocaldococcus jannaschii (strain ATCC

Query: 1 REVLNENVIG 10
RE+LN N+ G
Sbjct: 515 REILNANLPG 524




22|SequenceR|115|106|VEQSFREVLN

>sp|AROK_METTH|SHIKIMATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VEQSFREVLN 10
V+ +FREVL+
Sbjct: 198 VDMAFREVLD 207


>sp|Y3226_SACS2|UNCHARACTERIZED aldolase SSO3226|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EQSFREVLN 10
++SFR+V+N
Sbjct: 192 KESFRQVIN 200


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC

Query: 2 EQSFREVL 9
E+SF+EVL
Sbjct: 67 ERSFKEVL 74


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VEQSFREVLN 10
V+++FR+V+N
Sbjct: 267 VKETFRKVVN 276




23|SequenceR|120|111|AEPVQVEQSF

>sp|RL10E_THESM|LARGE ribosomal subunit protein uL16|Thermococcus sibiricus (strain DSM

Query: 1 AEPVQVEQS 9
AEPVQ+ Q+
Sbjct: 52 AEPVQIRQN 60


>sp|RL10E_PYRHO|LARGE ribosomal subunit protein uL16|Pyrococcus horikoshii (strain ATCC

Query: 1 AEPVQVEQS 9
AEPVQ+ Q+
Sbjct: 52 AEPVQIRQN 60


>sp|RL10E_PYRFU|LARGE ribosomal subunit protein uL16|Pyrococcus furiosus (strain ATCC

Query: 1 AEPVQVEQS 9
AEPVQ+ Q+
Sbjct: 52 AEPVQIRQN 60


>sp|TRPC_METKA|INDOLE-3-GLYCEROL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 EPVQVEQS 9
+PVQVE+S
Sbjct: 112 DPVQVEES 119




24|SequenceR|125|116|GYFCRAEPVQ

>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 3 FCRAEPV 9
FCR +PV
Sbjct: 93 FCRLKPV 99


>sp|RFCS_METS3|REPLICATION factor C small subunit|Methanobrevibacter smithii (strain ATCC

Query: 3 FCRAEPV 9
FCR +PV
Sbjct: 90 FCRLKPV 96


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GYFCRAEP 8
G+F R+EP
Sbjct: 454 GFFNRSEP 461


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GYFCRAE 7
YFCR E
Sbjct: 251 AYFCRFE 257




25|SequenceR|130|121|ILIQFGYFCR

>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ILIQFGYFC 9
I I FGY C
Sbjct: 222 IPIDFGYLC 230


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LIQFGYFC 9
LI+FGY C
Sbjct: 217 LIKFGYEC 224


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LIQFGYFC 9
L FGY+C
Sbjct: 227 LEMFGYYC 234


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii (strain

Query: 4 QFGYFCR 10
Q G FCR
Sbjct: 170 QMGLFCR 176


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain GE5

Query: 4 QFGYFCR 10
Q G FCR
Sbjct: 170 QMGLFCR 176


>sp|YD5A_METJA|UNCHARACTERIZED protein MJ1351.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 FGYFCR 10
FGY CR
Sbjct: 214 FGYKCR 219


>sp|KCY_METHJ|CYTIDYLATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LIQFGYFC 9
L +FG FC
Sbjct: 46 LAEFGSFC 53


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 3 IQFGYFC 9
+ F YFC
Sbjct: 246 VDFSYFC 252




26|SequenceR|135|126|SHVNEILIQF

>sp|FEN_THESM|FLAP endonuclease 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 SHVNEILIQ 9
S +NEILI+
Sbjct: 125 SKINEILIE 133


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HVNEILIQ 9
H+ EI+IQ
Sbjct: 193 HIQEIIIQ 200


>sp|SUMT_METBF|S-ADENOSYL-L-METHIONINE-DEPENDENT uroporphyrinogen III methyltransferase|Methanosarcina barkeri

Query: 1 SHVNEILIQ 9
+ +NE+L+Q
Sbjct: 70 AEINEVLVQ 78


>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 197 HIQEVIIQ 204


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 191 HIQEVIIQ 198


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 195 HIQEVIIQ 202


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 191 HIQEVIIQ 198


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 185 HIQEVIIQ 192


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 225 HIQEVIIQ 232


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 209 HIQEVIIQ 216


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 231 HIQEVIIQ 238


>sp|COFG_METJA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HVNEILIQ 9
H+ E++IQ
Sbjct: 226 HIQEVIIQ 233




27|SequenceR|140|131|LSYMESHVNE

>sp|DAPA_ARCFU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSYMESHVN 9
L Y+E HVN
Sbjct: 28 LDYLEKHVN 36


>sp|PFDA_CENSY|PREFOLDIN subunit alpha|Cenarchaeum symbiosum (strain A)

Query: 1 LSYMESHVNE 10
LSY+ES + E
Sbjct: 93 LSYLESRIKE 102


>sp|GCSH_HALSA|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 1 LSYMESH 7
L Y+ESH
Sbjct: 9 LQYLESH 15


>sp|GCSH_HALS3|PROBABLE glycine cleavage system H|Halobacterium salinarum (strain ATCC

Query: 1 LSYMESH 7
L Y+ESH
Sbjct: 9 LQYLESH 15




28|SequenceR|145|136|YTDILLSYME

>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TDILLSYME 10
TD++L YME
Sbjct: 202 TDVILIYME 210


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YTDILLSYM 9
YTD +LSY+
Sbjct: 228 YTDEILSYI 236


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TDILLSY 8
TDILL Y
Sbjct: 343 TDILLKY 349




29|SequenceR|150|141|KPDRIYTDIL

>sp|DMSC_HALSA|PUTATIVE dimethyl sulfoxide reductase membrane|Halobacterium salinarum

Query: 1 KPDRIY 6
+PDRIY
Sbjct: 117 RPDRIY 122


>sp|FTRL_METKA|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanopyrus kandleri (strain AV19 /

Query: 1 KPDRIYTDI 9
KP+ IY DI
Sbjct: 209 KPETIYPDI 217


>sp|PROF_THOAA|THOR profilin|Thorarchaeota archaeon (strain AB_25)

Query: 1 KPDRIYTDI 9
+PD +Y D+
Sbjct: 109 QPDGVYVDV 117


>sp|AROB_PYRCJ|3-DEHYDROQUINATE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PDRIYTDIL 10
PDR+Y L
Sbjct: 154 PDRVYRSAL 162


>sp|RNH2_METBF|RIBONUCLEASE HII|Methanosarcina barkeri (strain Fusaro /

Query: 1 KPDRIYTD 8
KPD +Y D
Sbjct: 98 KPDLLYAD 105


>sp|RNH2_THEKO|RIBONUCLEASE HII|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KPDRIYTD 8
KPD IY D
Sbjct: 98 KPDVIYAD 105


>sp|RNH2_METAC|RIBONUCLEASE HII|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KPDRIYTD 8
KPD +Y D
Sbjct: 98 KPDIVYAD 105


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DRIYTDI 9
DR+Y+DI
Sbjct: 175 DRLYSDI 181


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 DRIYTDI 9
DR+Y+DI
Sbjct: 175 DRLYSDI 181


>sp|G3PP_PYRFU|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DRIYTDI 9
DR+Y+DI
Sbjct: 177 DRLYSDI 183


>sp|RNH2_METMA|RIBONUCLEASE HII|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KPDRIYTD 8
KPD +Y D
Sbjct: 98 KPDIVYAD 105


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PDRIYTDI 9
PD ++TD+
Sbjct: 200 PDEVWTDV 207


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PDRIYTDI 9
PD ++TD+
Sbjct: 200 PDEVWTDV 207


>sp|PYRH_SACI3|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KPDRIYTDI 9
K R+YTD+
Sbjct: 147 KDPRVYTDV 155


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KPDRIYTDI 9
KPD IY I
Sbjct: 880 KPDHIYIKI 888


>sp|PYRH_SACI7|URIDYLATE kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KPDRIYTDI 9
K R+YTD+
Sbjct: 147 KDPRVYTDV 155


>sp|PYRH_SACI6|URIDYLATE kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KPDRIYTDI 9
K R+YTD+
Sbjct: 147 KDPRVYTDV 155


>sp|PYRH_SACI4|URIDYLATE kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KPDRIYTDI 9
K R+YTD+
Sbjct: 147 KDPRVYTDV 155


>sp|PYRH_SACI2|URIDYLATE kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KPDRIYTDI 9
K R+YTD+
Sbjct: 147 KDPRVYTDV 155


>sp|PYRH_SACI1|URIDYLATE kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KPDRIYTDI 9
K R+YTD+
Sbjct: 147 KDPRVYTDV 155


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 PDRIYTDIL 10
PD I TD++
Sbjct: 707 PDSILTDVI 715


>sp|RNH2_PYRHO|RIBONUCLEASE HII|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KPDRIYTD 8
KP +IY D
Sbjct: 98 KPQKIYVD 105




30|SequenceR|155|146|LFERKKPDRI

>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 1 LFERKKPDR 9
+FERK P R
Sbjct: 166 IFERKDPVR 174


>sp|SYS2_METBU|TYPE-2 serine--tRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 FERKKPDRI 10
ER+ PDRI
Sbjct: 140 LERRIPDRI 148


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 FERKKPD 8
F+RK PD
Sbjct: 27 FQRKNPD 33


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 LFERKKPDRI 10
+ ER+KPD I
Sbjct: 68 VIEREKPDLI 77


>sp|PURT_METM5|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 LFERKKPDRI 10
+ ER+KPD I
Sbjct: 68 VIEREKPDLI 77


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 3 ERKKPDRI 10
ER+KPD I
Sbjct: 76 EREKPDAI 83


>sp|PURT_METM7|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus

Query: 1 LFERKKPDRI 10
+ ER+KPD I
Sbjct: 68 VIEREKPDLI 77


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 3 ERKKPDRI 10
ER+KPD I
Sbjct: 76 EREKPDAI 83


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 LFERKKPDRI 10
+ ER+KPD +
Sbjct: 616 VIEREKPDGV 625


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 3 ERKKPDRI 10
ER+KPD I
Sbjct: 76 EREKPDAI 83


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 3 ERKKPDRI 10
ER+KPD I
Sbjct: 76 EREKPDAI 83


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC

Query: 1 LFERKKP 7
+FERK+P
Sbjct: 15 IFERKQP 21


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 LFERKKPDRI 10
+ ER++PD I
Sbjct: 77 VIERERPDAI 86


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 LFERKKPDRI 10
L ER+ PDR+
Sbjct: 95 LSERRIPDRL 104


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LFERKKPDRI 10
LFE+ + DRI
Sbjct: 546 LFEKLEDDRI 555


>sp|RL34_THEON|LARGE ribosomal subunit protein eL34|Thermococcus onnurineus (strain

Query: 2 FERKKPD 8
FERKKP
Sbjct: 26 FERKKPK 32


>sp|RL34_PYRFU|LARGE ribosomal subunit protein eL34|Pyrococcus furiosus (strain ATCC

Query: 2 FERKKPD 8
FERKKP
Sbjct: 26 FERKKPK 32


>sp|RL34_PYRHO|LARGE ribosomal subunit protein eL34|Pyrococcus horikoshii (strain ATCC

Query: 2 FERKKPD 8
FERKKP
Sbjct: 26 FERKKPK 32


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 ERKKPDRI 10
++K PDRI
Sbjct: 167 DKKNPDRI 174


>sp|QUEC_SACS2|7-CYANO-7-DEAZAGUANINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ERKKPDRI 10
++K PDRI
Sbjct: 167 DKKNPDRI 174


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 3 ERKKPDRI 10
ER+ PDRI
Sbjct: 308 ERELPDRI 315


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus

Query: 1 LFERKKPDRI 10
LFE K+ DR+
Sbjct: 66 LFELKEGDRL 75


>sp|DNLI_PYRCJ|DNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LFERKKPDRI 10
LF++ KP+ I
Sbjct: 29 LFKKAKPEEI 38




31|SequenceR|160|151|EIANFLFERK

>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 EIANFLFER 9
EI NF+FER
Sbjct: 119 EIENFVFER 127


>sp|RL6_METAR|LARGE ribosomal subunit protein uL6|Methanocella arvoryzae (strain DSM

Query: 2 IANFLFERK 10
I NFL ERK
Sbjct: 109 IGNFLGERK 117


>sp|RL6_METTP|LARGE ribosomal subunit protein uL6|Methanothrix thermoacetophila (strain

Query: 2 IANFLFERK 10
I+NFL ERK
Sbjct: 108 ISNFLGERK 116


>sp|RSMA_METBU|PROBABLE ribosomal RNA small subunit|Methanococcoides burtonii (strain DSM

Query: 1 EIANFLFERK 10
EIANF+F+ +
Sbjct: 258 EIANFIFKMR 267


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 IANFLFERK 10
+AN++F RK
Sbjct: 391 VANYIFGRK 399


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 IANFLFERK 10
+ F+FERK
Sbjct: 297 VFKFIFERK 305




32|SequenceR|165|156|VYPMTEIANF

>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYPMTEIANF 10
++P+TE+A F
Sbjct: 216 IHPLTEVAKF 225


>sp|MOAC_SULAC|PROBABLE cyclic pyranopterin monophosphate synthase|Sulfolobus

Query: 2 YPMTEIA 8
YP+TEI+
Sbjct: 125 YPLTEIS 131


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 VYPMTEIANF 10
++P+ E+A F
Sbjct: 216 IHPLEEVAKF 225


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VYPMTE 6
VYPMT+
Sbjct: 129 VYPMTD 134


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VYPMTEIANF 10
+YP IAN+
Sbjct: 139 IYPAEAIANY 148




33|SequenceR|170|161|DAKKKVYPMT

>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 DAKKKVYPM 9
DA++KV PM
Sbjct: 155 DARRKVLPM 163


>sp|COFD_METKA|2-PHOSPHO-L-LACTATE transferase|Methanopyrus kandleri (strain AV19 /

Query: 3 KKKVYPMT 10
K KVYPMT
Sbjct: 126 KWKVYPMT 133


>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DAKKKVYPMT 10
DA+K+VY +T
Sbjct: 357 DAEKRVYDLT 366


>sp|PSB2_CALMQ|PROTEASOME subunit beta 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 KKVYPMT 10
KKVYP+T
Sbjct: 41 KKVYPIT 47


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 KKVYPMT 10
KK+YP+T
Sbjct: 38 KKIYPLT 44


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DAKKKVYPM 9
D K +VYPM
Sbjct: 266 DDKYRVYPM 274


>sp|COFD_METM5|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C5 /

Query: 3 KKKVYPMT 10
K K+YPM+
Sbjct: 125 KSKIYPMS 132


>sp|COFD_METM6|2-PHOSPHO-L-LACTATE transferase|Methanococcus maripaludis (strain C6 /

Query: 3 KKKVYPMT 10
K K+YPM+
Sbjct: 125 KSKIYPMS 132


>sp|Y249_PYRAB|PUTATIVE GTPase PYRAB02490|Pyrococcus abyssi (strain GE5 /

Query: 4 KKVYPMT 10
+K+YP+T
Sbjct: 36 RKIYPLT 42


>sp|RS3A_SACS2|SMALL ribosomal subunit protein eS1|Saccharolobus solfataricus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EAAKKIYPL 179


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 4 KKVYPMT 10
KK+YP++
Sbjct: 183 KKIYPLS 189


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DAKKKVYPMT 10
+A+KK YP T
Sbjct: 114 EARKKGYPWT 123


>sp|RS3A_SACI7|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EATKKIYPL 179


>sp|RS3A_SACI6|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EATKKIYPL 179


>sp|RS3A_SACI4|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EATKKIYPL 179


>sp|RS3A_SACI3|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EATKKIYPL 179


>sp|RS3A_SACI2|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EATKKIYPL 179


>sp|RS3A_SACI1|SMALL ribosomal subunit protein eS1|Saccharolobus islandicus (strain

Query: 1 DAKKKVYPM 9
+A KK+YP+
Sbjct: 171 EATKKIYPL 179


>sp|Y1397_PYRAB|UNCHARACTERIZED protein PYRAB13970|Pyrococcus abyssi (strain GE5 /

Query: 1 DAKKKVYPMT 10
+A+KK YP T
Sbjct: 109 EARKKGYPWT 118




34|SequenceR|175|166|WRLAWDAKKK

>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 WRLAWDAKK 9
W++ WD KK
Sbjct: 762 WKIDWDKKK 770


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 WRLAWDAKK 9
W++ W AKK
Sbjct: 759 WKIDWKAKK 767


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WRLAWDAKK 9
WR WD KK
Sbjct: 297 WRYKWDRKK 305


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WRLAWDAK 8
WR+ W AK
Sbjct: 207 WRIEWPAK 214


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 WRLAWDAK 8
WR+ W AK
Sbjct: 207 WRVEWPAK 214


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WRLAWDAK 8
WR+ W AK
Sbjct: 210 WRVEWPAK 217


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 3 LAWDAKKK 10
++WDAK K
Sbjct: 384 ISWDAKPK 391


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 WRLAWDAKKK 10
WR+ W A+ K
Sbjct: 233 WRVEWAARWK 242


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WRLAWDAKKK 10
WR+ W A+ K
Sbjct: 215 WRVEWAARWK 224


>sp|FAE_METBF|5,6,7,8-TETRAHYDROMETHANOPTERIN hydro-lyase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LAWDAKKK 10
+ WDAK K
Sbjct: 131 IEWDAKDK 138


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WRLAW 5
WR AW
Sbjct: 347 WRYAW 351


>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WRLAWD 6
+R+AWD
Sbjct: 38 YRIAWD 43


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WRLAWDAK 8
WR+ W A+
Sbjct: 216 WRVDWPAR 223


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WRLAWDAK 8
WR W A+
Sbjct: 251 WRFEWPAQ 258


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WRLAWDAKK 9
WR A DAK+
Sbjct: 156 WRPAADAKE 164


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 5 WDAKKK 10
WDA+KK
Sbjct: 611 WDAEKK 616


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 WRLAWDA 7
WR WD+
Sbjct: 346 WRREWDS 352


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WRLAWDAK 8
WR+ W A+
Sbjct: 212 WRVDWPAR 219


>sp|THIC_METKA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 WRLAWD 6
W L WD
Sbjct: 377 WNLDWD 382


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 WRLAWDAK 8
WR+ W A+
Sbjct: 216 WRVDWPAR 223


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 1 WRLAWD 6
W++ WD
Sbjct: 191 WKVKWD 196


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WRLAWDAK 8
W++ +DAK
Sbjct: 245 WKVCFDAK 252


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WRLAWDAK 8
W++ +DAK
Sbjct: 245 WKVCFDAK 252


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WRLAWDAK 8
WR+ W A+
Sbjct: 216 WRVDWPAR 223


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WRLAWDAK 8
WR W A+
Sbjct: 249 WRFEWPAQ 256


>sp|SYK_HALMA|LYSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WRLAWDAK 8
WR W A+
Sbjct: 250 WRFEWPAQ 257


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 WRLAWD 6
W L WD
Sbjct: 1445 WNLPWD 1450


>sp|RNZ_PYRAR|RIBONUCLEASE Z|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 WRLAWDAKKK 10
W L WD K
Sbjct: 131 WLLEWDVGYK 140


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 WRLAWDAKKK 10
+R WD K+K
Sbjct: 307 YRYYWDEKEK 316




35|SequenceR|180|171|KRDAIWRLAW

>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DAIWRLA 9
DA+WR+A
Sbjct: 320 DAVWRMA 326


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 DAIWRLA 9
DA+W LA
Sbjct: 661 DAVWELA 667


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 2 RDAIWRLA 9
R+A WR+A
Sbjct: 231 REAAWRIA 238


>sp|HIS3_META3|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 RDAIWR 7
RD IWR
Sbjct: 61 RDKIWR 66


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 2 RDAIWRL 8
+DAIW L
Sbjct: 386 KDAIWAL 392


>sp|OFOA1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 2 RDAIWRL 8
+DAIW L
Sbjct: 386 KDAIWAL 392


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 6 WRLAW 10
WR AW
Sbjct: 347 WRYAW 351


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 1 KRDAIWRLAW 10
K D I RL W
Sbjct: 169 KEDVISRLKW 178


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 4 AIWRLAW 10
+IW +AW
Sbjct: 117 SIWYIAW 123




36|SequenceR|185|176|EGFTSKRDAI

>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GFTSKRD 8
GFTSK+D
Sbjct: 100 GFTSKKD 106


>sp|ILVC_METPE|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaerula palustris (strain ATCC

Query: 2 GFTSKRDAI 10
GFT+ RD+I
Sbjct: 242 GFTNMRDSI 250


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 2 GFTSKRDAI 10
GFT RD+I
Sbjct: 242 GFTKMRDSI 250


>sp|BRIX_SULTO|PROBABLE Brix domain-containing ribosomal biogenesis|Sulfurisphaera

Query: 3 FTSKRDA 9
FTS RDA
Sbjct: 10 FTSSRDA 16


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GFTSKRD 8
GF SKRD
Sbjct: 101 GFRSKRD 107


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FTSKRDAI 10
F +KRDAI
Sbjct: 451 FRNKRDAI 458


>sp|DUT_METBF|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 1 EGFTSKRDA 9
EGF K+DA
Sbjct: 135 EGFRLKKDA 143


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 2 GFTSKRDAI 10
GFT R+AI
Sbjct: 242 GFTKMREAI 250


>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EGFTSK 6
EGFTSK
Sbjct: 119 EGFTSK 124


>sp|PYRDB_PYRHO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Pyrococcus horikoshii (strain

Query: 2 GFTSKRDAI 10
G TS RDA+
Sbjct: 242 GITSWRDAV 250


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 1 EGFTSKRDAI 10
+GF +++DAI
Sbjct: 109 DGFDTEQDAI 118


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19

Query: 2 GFTSKRDA 9
G+T +RDA
Sbjct: 6 GYTGERDA 13




37|SequenceR|190|181|FAVVREGFTS

>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VVREGFTS 10
VVREGF S
Sbjct: 281 VVREGFMS 288


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FAVVREGF 8
F VVREGF
Sbjct: 53 FYVVREGF 60


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 FAVVREGFTS 10
FA++REG +
Sbjct: 194 FALIREGLVA 203




38|SequenceR|195|186|GEVAAFAVVR

>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GEVAAFAVV 9
G+VAAFA V
Sbjct: 142 GDVAAFAQV 150




39|SequenceR|200|191|GSFFVGEVAA

>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 GSFFVGEVA 9
GSF++GE++
Sbjct: 264 GSFYLGEIS 272


>sp|YC12A_PYRHO|UPF0248 protein PH1212.1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSFFVGE 7
G FFVGE
Sbjct: 50 GYFFVGE 56


>sp|Y315_THEKO|UPF0248 protein TK0315|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSFFVGE 7
G FFVGE
Sbjct: 50 GYFFVGE 56


>sp|Y1300_PYRFU|UPF0248 protein PF1300|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GSFFVGE 7
G FFVGE
Sbjct: 50 GYFFVGE 56


>sp|RL15E_SULTO|LARGE ribosomal subunit protein eL15|Sulfurisphaera tokodaii (strain DSM

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 114 GSYYVGE 120


>sp|RL15E_SACS2|LARGE ribosomal subunit protein eL15|Saccharolobus solfataricus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|RL15E_SACI7|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|RL15E_SACI6|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|RL15E_SACI4|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|RL15E_SACI3|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|RL15E_SACI2|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|RL15E_SACI1|LARGE ribosomal subunit protein eL15|Saccharolobus islandicus (strain

Query: 1 GSFFVGE 7
GS++VGE
Sbjct: 115 GSYYVGE 121


>sp|Y1209_THEGJ|UPF0248 protein TGAM_1209|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GSFFVGE 7
G FF+GE
Sbjct: 50 GYFFIGE 56


>sp|Y1058_PYRAB|UPF0248 protein PYRAB10580|Pyrococcus abyssi (strain GE5 /

Query: 1 GSFFVGE 7
G FF+GE
Sbjct: 50 GYFFIGE 56


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 GSFFVGEVA 9
G F++GE++
Sbjct: 264 GPFYLGEIS 272


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 GSFFVGEVA 9
G F++GE++
Sbjct: 264 GPFYLGEIS 272


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 GSFFVGEVA 9
G F++GE++
Sbjct: 264 GPFYLGEIS 272


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 GSFFVGEVA 9
G F++GE++
Sbjct: 264 GPFYLGEIS 272


>sp|Y856_PYRHO|UNCHARACTERIZED protein PH0856|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SFFVGEV 8
+FFVGEV
Sbjct: 125 TFFVGEV 131


>sp|RIFK_METM6|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C6 /

Query: 1 GSFFVG 6
GSFFVG
Sbjct: 14 GSFFVG 19




40|SequenceR|205|196|IAAFSGSFFV

>sp|DNLI_METTP|DNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IAAFSGS 7
+AAFSGS
Sbjct: 104 LAAFSGS 110




41|SequenceR|210|201|KKLWFIAAFS

>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KKLWFIAAFS 10
++ WF+A FS
Sbjct: 682 EEAWFVARFS 691


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KKLWFIA 7
KK WF+A
Sbjct: 355 KKQWFVA 361


>sp|FPON_METMA|F(420)H(2) dehydrogenase subunit N|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KKLWFIAAF 9
KK+ F+AAF
Sbjct: 251 KKMGFVAAF 259


>sp|IF2B_METS5|TRANSLATION initiation factor 2 subunit|Metallosphaera sedula (strain ATCC

Query: 1 KKLWFIAAFS 10
KK+W+I +
Sbjct: 121 KKIWYIQCLA 130




42|SequenceR|215|206|PMLGRKKLWF

>sp|RS24_THESM|SMALL ribosomal subunit protein eS24|Thermococcus sibiricus (strain DSM

Query: 2 MLGRKKLWF 10
+LGRK+++F
Sbjct: 13 LLGRKEIYF 21


>sp|RS24_THEON|SMALL ribosomal subunit protein eS24|Thermococcus onnurineus (strain

Query: 2 MLGRKKLWF 10
+LGRK+++F
Sbjct: 13 LLGRKEIYF 21


>sp|RS24_THEKO|SMALL ribosomal subunit protein eS24|Thermococcus kodakarensis (strain

Query: 2 MLGRKKLWF 10
+LGRK+++F
Sbjct: 13 LLGRKEIYF 21


>sp|RS24_THEGJ|SMALL ribosomal subunit protein eS24|Thermococcus gammatolerans (strain

Query: 2 MLGRKKLWF 10
+LGRK+++F
Sbjct: 13 LLGRKEIYF 21


>sp|HIS3_SACS2|PHOSPHORIBOSYL-AMP cyclohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LGRKKLWF 10
L RKKLW
Sbjct: 24 LSRKKLWL 31


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 PMLGRKK 7
P+LGRKK
Sbjct: 215 PVLGRKK 221


>sp|HIS3_SULTO|PHOSPHORIBOSYL-AMP cyclohydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LGRKKLWF 10
L RKKLW
Sbjct: 61 LSRKKLWL 68


>sp|K6PF_THELI|ADP-SPECIFIC phosphofructokinase|Thermococcus litoralis

Query: 1 PMLGRKK 7
P+LGRK+
Sbjct: 123 PLLGRKQ 129


>sp|G3P_METB6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoregula boonei (strain DSM 21154

Query: 3 LGRKKLW 9
LG+K LW
Sbjct: 101 LGKKALW 107


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PMLGRKK 7
PM+GRK+
Sbjct: 647 PMIGRKR 653


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 PMLGRKK 7
PM+GRK+
Sbjct: 647 PMVGRKR 653


>sp|HIS3_METJA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RKKLW 9
RKKLW
Sbjct: 61 RKKLW 65


>sp|HIS3_ARCFU|PHOSPHORIBOSYL-AMP cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 RKKLW 9
RKKLW
Sbjct: 50 RKKLW 54


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 4 GRKKLWF 10
G KK WF
Sbjct: 221 GEKKTWF 227


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 4 GRKKLWF 10
G KK WF
Sbjct: 221 GEKKTWF 227


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 GRKKLWF 10
G KK WF
Sbjct: 218 GEKKSWF 224


>sp|AATI_AERPE|A-TYPE ATP synthase subunit I|Aeropyrum pernix (strain ATCC 700893

Query: 2 MLGRKKLWF 10
MLG +LW+
Sbjct: 420 MLGLPELWY 428




43|SequenceR|220|211|SFTLGPMLGR

>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SFTLGPMLG 9
SF+LGP LG
Sbjct: 79 SFSLGPGLG 87


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SFTLGPMLG 9
SF+LGP LG
Sbjct: 78 SFSLGPGLG 86


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SFTLGPMLG 9
SF+LGP LG
Sbjct: 78 SFSLGPGLG 86


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SFTLGPMLG 9
SF+LGP LG
Sbjct: 78 SFSLGPGLG 86


>sp|RL1_METTP|LARGE ribosomal subunit protein uL1|Methanothrix thermoacetophila (strain

Query: 3 TLGPMLGR 10
TLGP+LG+
Sbjct: 118 TLGPILGK 125


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 2 FTLGPML 8
FTLGP+L
Sbjct: 154 FTLGPIL 160


>sp|RL1_META3|LARGE ribosomal subunit protein uL1|Methanococcus aeolicus (strain ATCC

Query: 3 TLGPMLG 9
TLGP+LG
Sbjct: 118 TLGPVLG 124


>sp|RL1_METTL|LARGE ribosomal subunit protein uL1|Methanothermococcus

Query: 3 TLGPMLG 9
TLGP+LG
Sbjct: 118 TLGPVLG 124


>sp|SECF_METKA|PROTEIN-EXPORT membrane protein SecF|Methanopyrus kandleri (strain AV19 /

Query: 3 TLGPMLGR 10
T+GP LGR
Sbjct: 109 TIGPALGR 116


>sp|Y2513_HALS3|UPF0173 metal-dependent hydrolase OE_2513F|Halobacterium salinarum (strain

Query: 2 FTLGPM 7
FT+GPM
Sbjct: 175 FTMGPM 180


>sp|Y1038_HALSA|UPF0173 metal-dependent hydrolase VNG_1038C|Halobacterium salinarum (strain

Query: 2 FTLGPM 7
FT+GPM
Sbjct: 175 FTMGPM 180


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SFTLGPMLGR 10
++ +GP LGR
Sbjct: 26 AYEIGPGLGR 35


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 LGPMLG 9
LGPM+G
Sbjct: 34 LGPMMG 39


>sp|Y300_HALMA|UPF0173 metal-dependent hydrolase rrnAC0300|Haloarcula marismortui (strain

Query: 2 FTLGPM 7
FT+GPM
Sbjct: 178 FTMGPM 183


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 2 FTLGPMLG 9
F +GPM+G
Sbjct: 344 FGVGPMIG 351


>sp|AROD_AERPE|3-DEHYDROQUINATE dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 SFTLGP 6
SFTLGP
Sbjct: 170 SFTLGP 175


>sp|IF6_HALLT|TRANSLATION initiation factor 6|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 TLGPMLGR 10
T GP LGR
Sbjct: 205 TTGPELGR 212


>sp|IF6_METBF|TRANSLATION initiation factor 6|Methanosarcina barkeri (strain Fusaro /

Query: 1 SFTLGPMLGR 10
S T GP LGR
Sbjct: 201 SDTTGPELGR 210


>sp|IF6_NATPD|TRANSLATION initiation factor 6|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TLGPMLGR 10
T GP LGR
Sbjct: 205 TTGPELGR 212


>sp|IF6_METAC|TRANSLATION initiation factor 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SFTLGPMLGR 10
S T GP LGR
Sbjct: 200 SETTGPELGR 209


>sp|TATC_CENSY|SEC-INDEPENDENT protein translocase protein TatC|Cenarchaeum symbiosum (strain A)

Query: 2 FTLGPMLG 9
F GPM+G
Sbjct: 236 FVAGPMIG 243


>sp|IF6_METMA|TRANSLATION initiation factor 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SFTLGPMLGR 10
S T GP LGR
Sbjct: 201 SETTGPELGR 210




44|SequenceR|225|216|SILENSFTLG

>sp|Y4660_METAC|UPF0200 protein MA_4660|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LENSFTL 9
+ENSFTL
Sbjct: 160 IENSFTL 166


>sp|SRP54_HALWD|SIGNAL recognition particle 54 kDa|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ILENSFTL 9
I+E SFTL
Sbjct: 320 IMEGSFTL 327


>sp|Y052_ARCFU|UNCHARACTERIZED protein AF_0052|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ILENSFTL 9
ILEN FTL
Sbjct: 22 ILENFFTL 29


>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain

Query: 1 SILENSFTLG 10
SIL+N FT G
Sbjct: 76 SILKNPFTNG 85


>sp|Y2246_METAC|UNCHARACTERIZED serpin-like protein MA_2246|Methanosarcina acetivorans (strain ATCC

Query: 3 LENSFTL 9
LEN+FTL
Sbjct: 288 LENNFTL 294




45|SequenceR|230|221|LGEDRSILEN

>sp|PSTB_METHJ|PHOSPHATE import ATP-binding protein PstB|Methanospirillum hungatei JF-1

Query: 1 LGEDRSILEN 10
GE R I EN
Sbjct: 229 FGETRQIFEN 238


>sp|DPHB_SACI7|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67


>sp|DPHB_SACI6|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67


>sp|DPHB_SACI4|DIPHTHINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67


>sp|DPHB_SACI3|DIPHTHINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67


>sp|DPHB_SACI2|DIPHTHINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67


>sp|DPHB_SACI1|DIPHTHINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 3 EDRSILEN 10
EDRSI+E
Sbjct: 424 EDRSIIET 431


>sp|AATB_METTP|A-TYPE ATP synthase subunit B|Methanothrix thermoacetophila (strain DSM

Query: 3 EDRSILE 9
EDRSI+E
Sbjct: 418 EDRSIIE 424


>sp|DPHB_SACS2|DIPHTHINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DRSILEN 10
DRS+LEN
Sbjct: 61 DRSLLEN 67




46|SequenceR|235|226|AFDCHLGEDR

>sp|RS8E_METB6|SMALL ribosomal subunit protein eS8|Methanoregula boonei (strain DSM

Query: 3 DCHLGEDR 10
D H+GEDR
Sbjct: 33 DTHIGEDR 40


>sp|RTCA_SULAC|RNA 3'-terminal phosphate cyclase|Sulfolobus acidocaldarius (strain

Query: 1 AFDCHLGE 8
AFD H+G+
Sbjct: 278 AFDSHMGD 285


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 AFDCHLGE 8
AFD H+G+
Sbjct: 289 AFDSHMGD 296


>sp|RTCA_KORCO|RNA 3'-terminal phosphate cyclase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 AFDCHLGE 8
AFD H+G+
Sbjct: 281 AFDSHMGD 288


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 3 DCHLGEDR 10
DCHLG +
Sbjct: 178 DCHLGAQK 185


>sp|XAD_HALVD|D-XYLONATE dehydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 AFDCH 5
AFDCH
Sbjct: 228 AFDCH 232


>sp|NFI_THEPD|ENDONUCLEASE V|Thermofilum pendens (strain DSM 2475

Query: 1 AFDCHLG 7
F CHLG
Sbjct: 120 GFACHLG 126


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FDCHLGED 9
F CH G D
Sbjct: 372 FSCHAGMD 379


>sp|ASD_ARCFU|PUTATIVE archaetidylserine decarboxylase proenzyme|Archaeoglobus fulgidus

Query: 2 FDCHL 6
FDCH+
Sbjct: 76 FDCHI 80


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DCHLGED 9
DCH GE+
Sbjct: 266 DCHSGEN 272


>sp|METE_AERPE|METHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 AFDCHLGEDR 10
+FD H G+ R
Sbjct: 146 SFDLHYGDRR 155


>sp|RTCA_DESA1|RNA 3'-terminal phosphate cyclase|Desulfurococcus amylolyticus (strain

Query: 1 AFDCHLGE 8
AFD H+G+
Sbjct: 289 AFDRHMGD 296


>sp|Y224_METJA|UNCHARACTERIZED protein MJ0224|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AFDCHLG 7
AFDC+L
Sbjct: 37 AFDCNLA 43


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 1 AFDCHLGE 8
AFD H+G+
Sbjct: 286 AFDDHMGD 293


>sp|Y564_METTH|UNCHARACTERIZED protein MTH_564|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AFDCHLGED 9
AFD + GED
Sbjct: 118 AFDTYGGED 126


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 1 AFDCHLGE 8
AFD HL +
Sbjct: 272 AFDAHLAD 279


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 2 FDCHLGEDR 10
F CH ED+
Sbjct: 197 FICHAHEDK 205


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HLGEDR 10
HLGE+R
Sbjct: 111 HLGEER 116




47|SequenceR|240|231|QFMLCAFDCH

>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FMLCAFDCH 10
F C ++CH
Sbjct: 101 FQECMYECH 109


>sp|Y2020_ARCFU|UNCHARACTERIZED protein AF_2020|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FMLCAFD 8
FMLCA D
Sbjct: 64 FMLCAKD 70


>sp|MTAD_PYRAB|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus abyssi (strain GE5 /

Query: 5 CAFDC 9
C+FDC
Sbjct: 189 CSFDC 193


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 4 LCAFDC 9
+C FDC
Sbjct: 69 ICNFDC 74




48|SequenceR|245|236|KNVLYQFMLC

>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 NVLYQFM 8
N+LYQF+
Sbjct: 33 NMLYQFL 39


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 2 NVLYQFM 8
N++YQF+
Sbjct: 30 NIIYQFL 36


>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 NVLYQFM 8
N++YQF+
Sbjct: 30 NIIYQFL 36


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NVLYQFML 9
N LYQF+
Sbjct: 32 NALYQFLF 39


>sp|FEN_METTP|FLAP endonuclease 1|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NTLYQFL 36


>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NTLYQFL 36


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NTLYQFL 36


>sp|FEN_METBU|FLAP endonuclease 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NTLYQFL 36


>sp|FEN_METB6|FLAP endonuclease 1|Methanoregula boonei (strain DSM 21154

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 31 NTLYQFL 37


>sp|FEN_METAR|FLAP endonuclease 1|Methanocella arvoryzae (strain DSM 22066

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NTLYQFL 36


>sp|FEN_IGNH4|FLAP endonuclease 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NTLYQFL 40


>sp|FEN_SULTO|FLAP endonuclease 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NALYQFL 36


>sp|FEN_STAMF|FLAP endonuclease 1|Staphylothermus marinus (strain ATCC 43588

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NALYQFL 40


>sp|FEN_SACS2|FLAP endonuclease 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NALYQFL 36


>sp|FEN_PYRNV|FLAP endonuclease 1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NALYQFL 40


>sp|FEN_PYRCJ|FLAP endonuclease 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NALYQFL 40


>sp|FEN_PYRAR|FLAP endonuclease 1|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NALYQFL 40


>sp|FEN_PYRAE|FLAP endonuclease 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NALYQFL 40


>sp|FEN_METPE|FLAP endonuclease 1|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 31 NALYQFL 37


>sp|FEN_METMJ|FLAP endonuclease 1|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 31 NALYQFL 37


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 31 NALYQFL 37


>sp|FEN_METKA|FLAP endonuclease 1|Methanopyrus kandleri (strain AV19 /

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 31 NALYQFL 37


>sp|FEN_METJA|FLAP endonuclease 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 30 NALYQFL 36


>sp|FEN_METHJ|FLAP endonuclease 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 31 NALYQFL 37


>sp|FEN_HYPBU|FLAP endonuclease 1|Hyperthermus butylicus (strain DSM 5456

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 33 NALYQFL 39


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 NVLYQFM 8
N LYQF+
Sbjct: 34 NALYQFL 40


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 KNVLYQFML 9
KN+L QF+L
Sbjct: 248 KNMLEQFVL 256


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KNVLYQFML 9
KN+ Y FM
Sbjct: 202 KNIKYDFMF 210




49|SequenceR|250|241|REESPKNVLY

>sp|SYT_META3|THREONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 EESPKNVLY 10
EE+P+NV+Y
Sbjct: 47 EENPQNVIY 55


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 REESPKNV 8
REESP+N+
Sbjct: 162 REESPENI 169


>sp|RNP1_IGNH4|RIBONUCLEASE P protein component 1|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 EESPKNVLY 10
+ +PKNV+Y
Sbjct: 2 KHTPKNVIY 10


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 REESPKNVLY 10
R+ +P+NVL+
Sbjct: 153 RDWAPRNVLF 162


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 REESPKNVLY 10
R+ +P+NVL+
Sbjct: 153 RDWAPRNVLF 162


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EESPKNVLY 10
E +PKNVL+
Sbjct: 151 EWAPKNVLF 159


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain ATCC

Query: 2 EESPKNVL 9
EE P+NVL
Sbjct: 184 EECPRNVL 191


>sp|CDC6_METB6|ORC1-TYPE DNA replication protein|Methanoregula boonei (strain DSM 21154

Query: 1 REESPKNVL 9
R E+P N+L
Sbjct: 56 RNETPSNIL 64


>sp|CBIF_METJA|COBALT-PRECORRIN-4 C(11)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 REESPKNVLY 10
REE+P V+Y
Sbjct: 186 REETPVAVVY 195


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 REESPKNVL 9
R E+P NVL
Sbjct: 55 RGETPSNVL 63


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC

Query: 1 REESPKNVL 9
R E+P NVL
Sbjct: 55 RGETPSNVL 63


>sp|Y066_METJA|UNCHARACTERIZED protein MJ0066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REESPKNVLY 10
RE++P N LY
Sbjct: 407 REKAPYNKLY 416


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ESPKNVL 9
E+PKNV+
Sbjct: 501 EAPKNVI 507


>sp|CDC61_SACS2|ORC1-TYPE DNA replication protein 1|Saccharolobus solfataricus (strain ATCC

Query: 1 REESPKNVL 9
REE P N+
Sbjct: 52 REEKPNNIF 60


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 3 ESPKNVLY 10
E+PKN Y
Sbjct: 64 EAPKNAYY 71


>sp|GLYA_METS3|SERINE hydroxymethyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 EESPKNVLY 10
EE PK VL+
Sbjct: 161 EEKPKIVLF 169


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 ESPKNVLY 10
E PK VLY
Sbjct: 177 EVPKEVLY 184


>sp|Y011_METJA|UNCHARACTERIZED protein MJ0011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EESPKNVLY 10
EE+PKN+ +
Sbjct: 161 EETPKNLGF 169




50|SequenceR|255|246|IIERVREESP

>sp|RIFK_METTH|RIBOFLAVIN kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IIERVREESP 10
I+ER+RE +P
Sbjct: 43 IVERIREGAP 52


>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 1 IIERVREESP 10
IER +EESP
Sbjct: 44 FIERKKEESP 53


>sp|FAEHP_METST|BIFUNCTIONAL enzyme Fae/Hps|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IIERVREESP 10
II ++REE P
Sbjct: 219 IISKIREERP 228


>sp|ISCS2_ARCFU|CYSTEINE desulfurase IscS 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIERVREESP 10
+IER+R SP
Sbjct: 369 VIERLRSMSP 378


>sp|ISCS1_ARCFU|CYSTEINE desulfurase IscS 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIERVREESP 10
+IER+R SP
Sbjct: 369 VIERLRSMSP 378


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IIERVREESP 10
++E +RE+SP
Sbjct: 12 VVEILREKSP 21


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IIERVREES 9
+IER REE+
Sbjct: 176 VIERTREEN 184


>sp|TRUA_METPE|TRNA pseudouridine synthase A|Methanosphaerula palustris (strain ATCC

Query: 2 IERVREESP 10
+ RVRE+SP
Sbjct: 140 LARVREKSP 148


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IIERVREES 9
+I+RVREE+
Sbjct: 578 LIKRVREET 586


>sp|Y1456_ARCFU|UNCHARACTERIZED protein AF_1456|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIERVREESP 10
IIERVR E+
Sbjct: 18 IIERVRREAK 27


>sp|SRP54_PYRAR|SIGNAL recognition particle 54 kDa|Pyrobaculum arsenaticum (strain DSM

Query: 2 IERVREESP 10
++R+REE P
Sbjct: 55 VKRIREEKP 63


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IIERVREE 8
IIER R+E
Sbjct: 176 IIERTRDE 183


>sp|BPSA_THEKO|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IIERVREES 9
IIERV+E++
Sbjct: 4 IIERVKEKT 12


>sp|SRP54_PYRCJ|SIGNAL recognition particle 54 kDa|Pyrobaculum calidifontis (strain DSM

Query: 2 IERVREESP 10
++R+REE P
Sbjct: 54 VKRIREEKP 62


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 IERVREES 9
IERV EES
Sbjct: 33 IERVEEES 40


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IIERVREESP 10
+IE++R+E P
Sbjct: 283 MIEKIRKELP 292


>sp|TRPA_METTH|TRYPTOPHAN synthase alpha chain|Methanothermobacter thermautotrophicus

Query: 1 IIERVRE 7
+IERVRE
Sbjct: 86 LIERVRE 92


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 1 IIERVREE 8
I+ER REE
Sbjct: 230 ILERTREE 237




51|SequenceR|260|251|KVADVIIERV

***** No hits found ******


52|SequenceR|265|256|FEQEIKVADV

>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FEQEIKVADV 10
FE+ +KV +V
Sbjct: 53 FEERVKVMEV 62


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FEQEIKVAD 9
F +E+K+AD
Sbjct: 135 FGKEVKIAD 143




53|SequenceR|270|261|LAETLFEQEI

>sp|ILVC_METTH|KETOL-ACID reductoisomerase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 1 LAETLFEQEI 10
+ ET+FEQ I
Sbjct: 84 IQETVFEQSI 93


>sp|THSA_HALSA|THERMOSOME subunit alpha|Halobacterium salinarum (strain ATCC 700922

Query: 2 AETLFEQEI 10
AETL EQ+I
Sbjct: 112 AETLLEQDI 120




54|SequenceR|275|266|ILGVPLAETL

>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 2 LGVPLAE 8
LG+PLAE
Sbjct: 178 LGIPLAE 184


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ILGVPLAE 8
+LGVPL E
Sbjct: 445 VLGVPLDE 452


>sp|QUEC_HALMA|7-CYANO-7-DEAZAGUANINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LGVPLAET 9
LGVP A+T
Sbjct: 182 LGVPYADT 189


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 3 GVPLAETL 10
GVPL ET+
Sbjct: 156 GVPLIETV 163


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ILGVPLAE 8
+LG+PL E
Sbjct: 450 VLGIPLDE 457


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ILGVPLAETL 10
I G+P+ ET+
Sbjct: 597 IYGIPVYETI 606


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 LGVPLAETL 10
LGV L ETL
Sbjct: 456 LGVELKETL 464


>sp|PORC_METJA|PYRUVATE synthase subunit PorC|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ILGVPLAET 9
+LGVP+ T
Sbjct: 120 VLGVPIVNT 128


>sp|PORC_METBF|PYRUVATE synthase subunit PorC|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILGVPLAETL 10
I+GVP+ T+
Sbjct: 124 IIGVPIVNTV 133




55|SequenceR|280|271|ICNMGILGVP

>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 NMGILG 8
NMGILG
Sbjct: 790 NMGILG 795


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NMGILG 8
NMGILG
Sbjct: 790 NMGILG 795


>sp|Y3021_SACS2|UNCHARACTERIZED protein SSO3021|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 NMGILGVP 10
++GI+G+P
Sbjct: 347 HLGIIGIP 354


>sp|FEN_METAC|FLAP endonuclease 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 MGILGVP 10
+GI+G+P
Sbjct: 139 LGIMGIP 145


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GILGVP 10
GILG+P
Sbjct: 447 GILGIP 452


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 5 GILGVP 10
GILG+P
Sbjct: 445 GILGIP 450


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 GILGVP 10
GILG+P
Sbjct: 447 GILGIP 452


>sp|SYP_METAC|PROLINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 GILGVP 10
GILG+P
Sbjct: 447 GILGIP 452


>sp|RUVB_METHJ|HOLLIDAY junction branch migration complex|Methanospirillum hungatei JF-1

Query: 5 GILGVP 10
GILG+P
Sbjct: 195 GILGIP 200


>sp|DEOC_HALMA|DEOXYRIBOSE-PHOSPHATE aldolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ICNMGIL 7
+CN+G+L
Sbjct: 88 VCNVGLL 94


>sp|SECF_THEGJ|PROTEIN-EXPORT membrane protein SecF|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ICNMGILGV 9
+ MGILG+
Sbjct: 193 LATMGILGI 201


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 ICNMGILGV 9
+ N+G++GV
Sbjct: 299 VVNLGLIGV 307


>sp|PDXT_META3|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus aeolicus

Query: 3 NMGILGV 9
N+GILG+
Sbjct: 2 NIGILGI 8


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 GILGVP 10
G+LGVP
Sbjct: 113 GVLGVP 118




56|SequenceR|285|276|YQKMLICNMG

>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 3 KMLICNMG 10
+M ICNM
Sbjct: 215 RMTICNMA 222


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 3 KMLICNMG 10
+++ICN+G
Sbjct: 19 ELVICNLG 26


>sp|THIC_METPE|PHOSPHOMETHYLPYRIMIDINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 YQKMLICNMG 10
Y+K+ IC +G
Sbjct: 46 YRKVKICGIG 55


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 YQKMLICNMG 10
Y+K+ IC +G
Sbjct: 46 YRKVKICGIG 55


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YQKMLICNMG 10
Y+K+ +C +G
Sbjct: 46 YRKVKLCGIG 55


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YQKMLICNMG 10
Y+K+ +C +G
Sbjct: 46 YRKVKLCGIG 55




57|SequenceR|290|281|AVFEIYQKML

>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 3 FEIYQKML 10
FE+YQ +L
Sbjct: 371 FEVYQNLL 378


>sp|NADB_PYRFU|L-ASPARTATE oxidase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EIYQKML 10
EIY+KML
Sbjct: 254 EIYRKML 260


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 AVFEIYQKML 10
AVFE+ +ML
Sbjct: 213 AVFEMVDRML 222


>sp|KPYK_METJA|PYRUVATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AVFEIYQKM 9
AV+E+Y+K+
Sbjct: 341 AVYELYKKL 349


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 1 AVFEIYQKM 9
AVF+IY K+
Sbjct: 251 AVFDIYMKV 259


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 1 AVFEIYQKM 9
AVF+IY K+
Sbjct: 251 AVFDIYMKV 259


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AVFEIYQKML 10
AV E Y +ML
Sbjct: 136 AVIETYNRML 145


>sp|Y916_METST|UPF0425 pyridoxal phosphate-dependent protein Msp_0916|Methanosphaera

Query: 4 EIYQKML 10
E+YQK+L
Sbjct: 267 ELYQKLL 273


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 4 EIYQKML 10
E+YQK+L
Sbjct: 178 EVYQKLL 184


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 FEIYQKML 10
FE+Y+K L
Sbjct: 346 FEVYKKKL 353


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 AVFEIYQKML 10
A FE+Y+K L
Sbjct: 344 AEFELYKKNL 353


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 1 AVFEIYQ 7
A+FE+Y+
Sbjct: 220 AIFEVYE 226




58|SequenceR|295|286|VLLRDAVFEI

>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LLRDAVFEI 10
LLRDAV E+
Sbjct: 322 LLRDAVIEL 330


>sp|Y1023_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 LLRDAVFEI 10
LLRD +FE+
Sbjct: 161 LLRDIIFEL 169


>sp|SYY_METHJ|TYROSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LRDAVFEI 10
LRDA FE+
Sbjct: 55 LRDAGFEV 62




59|SequenceR|300|291|SFGLEVLLRD

>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 3 GLEVLLR 9
GLEVLLR
Sbjct: 734 GLEVLLR 740


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FGLEVLLRD 10
FGLEV +D
Sbjct: 250 FGLEVFKKD 258


>sp|DLYKI_THEX4|D-LYXOSE ketol-isomerase|Thermofilum sp. (strain ex4484_79)

Query: 1 SFGLEVLL 8
+FGLE+L+
Sbjct: 45 TFGLEILV 52


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 3 GLEVLLRD 10
G EV+LRD
Sbjct: 564 GREVILRD 571




60|SequenceR|305|296|AQFVKSFGLE

>sp|Y876_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 2 QFVKSFGLE 10
Q+ KSFGL+
Sbjct: 227 QYAKSFGLD 235


>sp|Y378_NANEQ|UPF0173 metal-dependent hydrolase NEQ378|Nanoarchaeum equitans (strain

Query: 1 AQFVKSFGLE 10
A+FVK F +E
Sbjct: 65 AEFVKQFNIE 74


>sp|RS17E_METPE|SMALL ribosomal subunit protein eS17|Methanosphaerula palustris (strain

Query: 3 FVKSFGLE 10
++K+FGLE
Sbjct: 7 YIKNFGLE 14


>sp|EF1A_SULAC|ELONGATION factor 1-alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AQFVKSFGLE 10
++F+KSFG +
Sbjct: 174 SKFMKSFGFD 183


>sp|Y891_ARCFU|UNCHARACTERIZED protein AF_0891|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QFVKSFGL 9
+FVK+FGL
Sbjct: 58 EFVKAFGL 65


>sp|SYFB_THEVO|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FVKSFGLE 10
F+KS+G+E
Sbjct: 332 FIKSYGIE 339


>sp|Y551_METJA|UNCHARACTERIZED protein MJ0551|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AQFVKSFGLE 10
A FV+++G+E
Sbjct: 255 ADFVENYGIE 264


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QFVKSFGLE 10
+F KS GLE
Sbjct: 560 KFAKSIGLE 568


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 QFVKSFGLE 10
QF+K+ G+E
Sbjct: 198 QFLKNLGIE 206


>sp|HACA_METJA|METHANOGEN homoaconitase large subunit|Methanocaldococcus jannaschii (strain

Query: 2 QFVKSFGLE 10
+FVK FG++
Sbjct: 80 EFVKRFGIK 88


>sp|TRPC_SULAC|INDOLE-3-GLYCEROL phosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QFVKSFGLE 10
++ KS+GLE
Sbjct: 148 KYAKSYGLE 156


>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 2 QFVKSFGLE 10
+F+KSFG +
Sbjct: 175 KFMKSFGFD 183


>sp|EF1A_SULTO|ELONGATION factor 1-alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AQFVKSFGLE 10
+F+KSFG +
Sbjct: 174 GKFMKSFGFD 183


>sp|BPSA_METJA|N(4)-BIS(AMINOPROPYL)SPERMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QFVKSFGL 9
+F+KS+G+
Sbjct: 75 EFIKSYGI 82


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FVKSFGLE 10
F+KS G+E
Sbjct: 476 FIKSLGVE 483


>sp|PYRDB_THEAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma acidophilum

Query: 4 VKSFGLE 10
VK FGLE
Sbjct: 131 VKGFGLE 137


>sp|Y2332_ARCFU|UNCHARACTERIZED protein AF_2332|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AQFVKSFGLE 10
A+F KSF L+
Sbjct: 105 AEFYKSFALK 114


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 FVKSFGLE 10
FVK FG++
Sbjct: 410 FVKGFGIK 417


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 FVKSFGLE 10
F+K+ GLE
Sbjct: 424 FIKNIGLE 431


>sp|PYRDB_THEVO|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Thermoplasma volcanium (strain

Query: 4 VKSFGLE 10
VK FGLE
Sbjct: 131 VKGFGLE 137


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FVKSFGLE 10
F KSFG++
Sbjct: 130 FAKSFGIK 137




61|SequenceR|310|301|DFPNEAQFVK

>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 FPNEAQFV 9
FP EAQ V
Sbjct: 331 FPREAQIV 338


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DFPNEAQFVK 10
+FP E+ F++
Sbjct: 250 EFPKESSFIR 259


>sp|RL23_NATPD|LARGE ribosomal subunit protein uL23|Natronomonas pharaonis (strain

Query: 1 DFPNEAQFV 9
DF N+ QFV
Sbjct: 17 DFENKLQFV 25


>sp|Y1259_THEVO|UPF0292 protein TV1259|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DFPNEAQFVK 10
DF N+ F+K
Sbjct: 62 DFDNKGSFLK 71




62|SequenceR|315|306|INEMFDFPNE

>sp|GCSPA_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 INEMFDFPNE 10
++E+FD P E
Sbjct: 26 VDELFDIPPE 35


>sp|GCSPA_HALS3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 INEMFDFPNE 10
++E+FD P E
Sbjct: 26 VDELFDIPPE 35


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 INEMFDFPNE 10
+NE DFP E
Sbjct: 130 LNENVDFPRE 139


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EMFDFPN 9
+ FDFPN
Sbjct: 91 QYFDFPN 97


>sp|RL5_META3|LARGE ribosomal subunit protein uL5|Methanococcus aeolicus (strain ATCC

Query: 1 INEMFDFPNE 10
I E DFPN+
Sbjct: 112 IPEHIDFPNQ 121


>sp|SYD_THEKO|ASPARTATE--TRNA(ASP) ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 INEMFDFPN 9
I +M D PN
Sbjct: 414 IKQMLDLPN 422


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 INEMFDFP 8
+NE DFP
Sbjct: 50 VNEKSDFP 57


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 INEMFDFPN 9
+NE++D N
Sbjct: 231 VNELYDLKN 239


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 INEMFDF 7
+NEMF F
Sbjct: 931 LNEMFSF 937


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 INEMFDFPN 9
++ + DFPN
Sbjct: 77 VHSLIDFPN 85


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 4 MFDFPNE 10
+FD+P+E
Sbjct: 298 LFDYPSE 304




63|SequenceR|320|311|KGELSINEMF

>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 KGELSINEM 9
KGEL+IN++
Sbjct: 426 KGELTINDL 434


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 KGELSINEMF 10
+G+L++NE F
Sbjct: 241 RGQLAVNEKF 250


>sp|RL3_NANEQ|LARGE ribosomal subunit protein uL3|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 ELSINEMF 10
ELSIN++F
Sbjct: 176 ELSINDVF 183


>sp|RL4_METBU|LARGE ribosomal subunit protein uL4|Methanococcoides burtonii (strain

Query: 1 KGELSINEMF 10
KGE+++ E+F
Sbjct: 14 KGEIALPEVF 23


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 2 GELSINEMF 10
G+ S+NE+F
Sbjct: 336 GDASLNELF 344


>sp|BRIX_METJA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanocaldococcus

Query: 1 KGELSINEMF 10
+G+LS+ E+F
Sbjct: 31 RGKLSLKEIF 40


>sp|Y1714_PYRHO|UNCHARACTERIZED lipoprotein PH1714|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KGELSINEM 9
+G+LS N+M
Sbjct: 48 RGDLSFNDM 56


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGELSINEM 9
+G+LS N+M
Sbjct: 44 RGDLSFNDM 52


>sp|Y452_PYRAB|UNCHARACTERIZED lipoprotein PYRAB04520|Pyrococcus abyssi (strain GE5 /

Query: 1 KGELSINEM 9
+G+LS N+M
Sbjct: 47 RGDLSFNDM 55


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ELSINEMF 10
E S+NE+F
Sbjct: 237 ETSVNELF 244




64|SequenceR|325|316|EFFNTKGELS

>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 EFFNTKGE 8
EF TKGE
Sbjct: 28 EFLKTKGE 35


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 EFFNTKGEL 9
++FN GEL
Sbjct: 389 QYFNKDGEL 397


>sp|RS27_METTH|SMALL ribosomal subunit protein eS27|Methanothermobacter

Query: 2 FFNTKGEL 9
F+NTKG
Sbjct: 6 FYNTKGNF 13


>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 3 FNTKGELS 10
FNT GEL+
Sbjct: 25 FNTPGELA 32


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM

Query: 3 FNTKGELS 10
FN++GEL+
Sbjct: 52 FNSEGELA 59


>sp|LEUD_METAC|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 FNTKGELS 10
FNT GEL+
Sbjct: 25 FNTPGELA 32


>sp|RS27A_HALMA|SMALL ribosomal subunit protein eS31|Haloarcula marismortui (strain

Query: 1 EFFNTKGEL 9
E++N GEL
Sbjct: 5 EYYNDDGEL 13


>sp|RL30_DESA1|LARGE ribosomal subunit protein uL30|Desulfurococcus amylolyticus (strain

Query: 3 FNTKGEL 9
FN KGEL
Sbjct: 141 FNMKGEL 147


>sp|EPDD_METMP|MINOR structural pilin EpdD|Methanococcus maripaludis (strain DSM 14266

Query: 1 EFFNTKGELS 10
+FF+ +G+LS
Sbjct: 7 KFFSKRGQLS 16


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EFFNTKGELS 10
+++N GELS
Sbjct: 93 DYYNLSGELS 102


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EFFNTKGELS 10
E F+T GE+S
Sbjct: 277 ECFDTSGEVS 286


>sp|GPI_THEON|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus onnurineus (strain NA1)

Query: 1 EFFNTKG 7
EFF TKG
Sbjct: 81 EFFFTKG 87


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EFFNTKG 7
EFF TKG
Sbjct: 81 EFFFTKG 87


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EFFNTKGEL 9
EFF T GE+
Sbjct: 401 EFFRTVGEI 409




65|SequenceR|330|321|ESVRKEFFNT

>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 ESVRKEFFNT 10
E+VRK F+NT
Sbjct: 272 EAVRKAFYNT 281


>sp|CSA5A_SACS2|CRISPR type I-A cluster 1/Apern-associated|Saccharolobus solfataricus

Query: 1 ESVRKEFFN 9
ESV KEFF+
Sbjct: 134 ESVIKEFFD 142


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 VRKEFFNT 10
V+KE FNT
Sbjct: 1169 VKKENFNT 1176


>sp|DHYS_SULAC|PROBABLE deoxyhypusine synthase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 VRKEFFN 9
+R+E+FN
Sbjct: 78 IRREYFN 84


>sp|NTPPA_METBU|DTTP/UTP pyrophosphatase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ESVRKEFFN 9
ES+ +FFN
Sbjct: 163 ESINGDFFN 171


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VRKEFFN 9
VRK+F+N
Sbjct: 250 VRKDFYN 256




66|SequenceR|335|326|AFRQYESVRK

>sp|HIS4_PYRFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Pyrococcus furiosus (strain

Query: 1 AFRQYESVRK 10
FR YES++K
Sbjct: 82 GFRDYESIKK 91


>sp|HIS4_THEON|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus onnurineus (strain

Query: 1 AFRQYESVRK 10
FR YES+ K
Sbjct: 80 GFRSYESIAK 89


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 3 RQYESVR 9
R YESVR
Sbjct: 25 RMYESVR 31


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 2 FRQYESVRK 10
FR YES K
Sbjct: 240 FRSYESFEK 248


>sp|AAT_SULTO|ASPARTATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 QYESVRK 10
+YESVRK
Sbjct: 87 KYESVRK 93




67|SequenceR|340|331|TEAMVAFRQY

>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 2 EAMVAFRQY 10
+A++AFRQ+
Sbjct: 70 DALLAFRQH 78




68|SequenceR|345|336|FVNDTTEAMV

>sp|CSD_AERPE|PROBABLE cysteine desulfurase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FVNDTTEAM 9
F +TTEAM
Sbjct: 85 FTRNTTEAM 93


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 FVNDTTEAMV 10
FVN TEA V
Sbjct: 111 FVNSGTEATV 120


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FVNDTTEAMV 10
FVN TEA V
Sbjct: 112 FVNSGTEATV 121


>sp|GSA_HALSA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FVNDTTEAMV 10
FVN TEA V
Sbjct: 112 FVNSGTEATV 121


>sp|GSA_HALS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halobacterium salinarum (strain ATCC 29341

Query: 1 FVNDTTEAMV 10
FVN TEA V
Sbjct: 112 FVNSGTEATV 121


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 FVNDTTEAM 9
FV+D TEA+
Sbjct: 100 FVSDVTEAI 108


>sp|GSA_HALLT|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 FVNDTTEAMV 10
FVN TEA V
Sbjct: 111 FVNSGTEATV 120


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FVNDTTEAMV 10
FVN TEA V
Sbjct: 111 FVNSGTEATV 120




69|SequenceR|351|341|FDADLTFVNDT

>sp|PANE_ARCFU|2-DEHYDROPANTOATE 2-reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DADLTFV 8
DAD+TFV
Sbjct: 65 DADITFV 71


>sp|HMGCS_AERPE|HYDROXYMETHYLGLUTARYL-COA synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FDADLTFVNDT 11
F++ T+V DT
Sbjct: 185 FESSFTYVTDT 195


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 1 FDADLTFVND 10
+DA LT VND
Sbjct: 558 YDAYLTKVND 567


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 FDADLTFVND 10
FDA + F+ND
Sbjct: 77 FDAHVQFLND 86


>sp|IF6_THEGJ|TRANSLATION initiation factor 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FDADLTFVN 9
+DA+L F+N
Sbjct: 76 WDAELDFIN 84


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FDADLTFVNDT 11
F+A ++V DT
Sbjct: 177 FEASYSYVTDT 187


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DADLTFVND 10
DAD ++V+D
Sbjct: 665 DADASYVSD 673


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 1 FDADLTFVN 9
+DAD+T +N
Sbjct: 366 YDADITVIN 374


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 1 FDADLTFVND 10
+ +DLT+ ND
Sbjct: 94 YSSDLTYEND 103


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 2 DADLTFVND 10
DAD++ +ND
Sbjct: 14 DADVSTIND 22


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 DADLTFVNDT 11
D DL +V DT
Sbjct: 154 DVDLGWVGDT 163




THE END