1|SequenceR|10|1|SSQGMVQTAM
***** No hits found ******
2|SequenceR|15|6|LGGGGSSQGM
>sp|Y126_ADE07|UNCHARACTERIZED 12.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 GGGGSSQG 9
G GGS+QG
Sbjct: 67 GHGGSAQG 74
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 LGGGGSSQG 9
LGGG + QG
Sbjct: 2633 LGGGETDQG 2641
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 LGGGGSSQG 9
LGGG + QG
Sbjct: 2606 LGGGETDQG 2614
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 LGGGGSSQG 9
LGGG + QG
Sbjct: 2611 LGGGETDQG 2619
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 LGGGGSSQGM 10
LGG GS+ G+
Sbjct: 43 LGGRGSTLGL 52
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGGGSS 7
GGGG+S
Sbjct: 177 GGGGAS 182
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGGGSS 7
GGGG+S
Sbjct: 177 GGGGAS 182
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas)
Query: 2 GGGGSSQGM 10
GG G + GM
Sbjct: 15 GGAGMADGM 23
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LGGGGSSQGM 10
GGGG+++ M
Sbjct: 60 FGGGGANRLM 69
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 1 LGGGG 5
LGGGG
Sbjct: 74 LGGGG 78
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 1 LGGGG 5
LGGGG
Sbjct: 74 LGGGG 78
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 LGGGG 5
LGGGG
Sbjct: 74 LGGGG 78
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 LGGGG 5
LGGGG
Sbjct: 74 LGGGG 78
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GGGSSQG 9
GGG+S G
Sbjct: 422 GGGTSGG 428
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGGSSQG 9
GGG+S G
Sbjct: 422 GGGTSGG 428
3|SequenceR|20|11|GSSTFLGGGG
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 4 TFLGGG 9
TFLGGG
Sbjct: 129 TFLGGG 134
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GSSTFLGG 8
G+S F GG
Sbjct: 4982 GTSKFYGG 4989
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GSSTFLGG 8
G+S F GG
Sbjct: 4959 GTSKFYGG 4966
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 3 STFLGGG 9
+TFL GG
Sbjct: 252 ATFLDGG 258
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 4 TFLGGG 9
TFL GG
Sbjct: 129 TFLSGG 134
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 TFLGGG 9
TFL GG
Sbjct: 129 TFLSGG 134
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 4 TFLGGG 9
TFL GG
Sbjct: 129 TFLSGG 134
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 TFLGGG 9
TFL GG
Sbjct: 129 TFLSGG 134
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 4 TFLGGG 9
TFL GG
Sbjct: 129 TFLSGG 134
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 4 TFLGGG 9
TFL GG
Sbjct: 129 TFLSGG 134
4|SequenceR|25|16|AMGINGSSTF
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 AMGINGSSTF 10
A GI+GS++F
Sbjct: 894 AEGISGSNSF 903
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 AMGINGSSTF 10
A GI+GS++F
Sbjct: 894 AEGISGSNSF 903
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLKISSSF 323
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLKISSSF 323
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLKISSSF 323
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 2 MGINGSSTF 10
+G+N S+TF
Sbjct: 323 VGVNHSNTF 331
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 MGINGSSTF 10
+G+N S+TF
Sbjct: 323 VGVNHSNTF 331
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 MGINGSSTF 10
+G+N S+TF
Sbjct: 323 VGVNHSNTF 331
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 313 AMGLRISSSF 322
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 308 AMGLRISSSF 317
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 306 AMGLRISSSF 315
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 307 AMGLRISSSF 316
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 AMGINGSSTF 10
AMG+ SS+F
Sbjct: 314 AMGLRISSSF 323
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 AMGINGS 7
+MGI+GS
Sbjct: 480 SMGIDGS 486
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 AMGINGS 7
+MGI+GS
Sbjct: 480 SMGIDGS 486
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 AMGINGS 7
+MGI+GS
Sbjct: 480 SMGIDGS 486
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 AMGINGS 7
+MGI+GS
Sbjct: 480 SMGIDGS 486
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 AMGING 6
A+G+NG
Sbjct: 416 ALGVNG 421
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 AMGING 6
A+G+NG
Sbjct: 416 ALGVNG 421
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 1 AMGINGSS 8
++G++GSS
Sbjct: 119 SLGVSGSS 126
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 AMGING 6
A+GING
Sbjct: 73 AVGING 78
5|SequenceR|30|21|MDNPLAMGIN
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 MDNPLAM 7
+DNP AM
Sbjct: 337 LDNPFAM 343
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 DNPLAMGIN 10
D P+++GIN
Sbjct: 216 DRPVSVGIN 224
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 4 PLAMGIN 10
P+AMGIN
Sbjct: 17 PVAMGIN 23
>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)
Query: 4 PLAMGIN 10
P+AMGIN
Sbjct: 17 PVAMGIN 23
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 DNPLAMGIN 10
+NPL G+N
Sbjct: 1383 NNPLKGGLN 1391
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 4 PLAMGIN 10
P+A+GIN
Sbjct: 1420 PVAVGIN 1426
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 4 PLAMGIN 10
P+A+GIN
Sbjct: 1420 PVAVGIN 1426
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 3 NPLAMG 8
NPLA+G
Sbjct: 397 NPLAVG 402
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 MDNPLAMG 8
MD+PL G
Sbjct: 1394 MDSPLVKG 1401
Query: 3 NPLAMGIN 10
NPL G+N
Sbjct: 1382 NPLRGGLN 1389
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 3 NPLAMGIN 10
NP +G+N
Sbjct: 326 NPFRLGLN 333
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 NPLAMGIN 10
NPL G+N
Sbjct: 1384 NPLKGGLN 1391
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 NPLAMGIN 10
NPL G+N
Sbjct: 1382 NPLKGGLN 1389
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 3 NP---LAMGIN 10
NP LAMG+N
Sbjct: 501 NPSSDLAMGLN 511
>sp|VPK2_VAR67|SERINE/THREONINE-PROTEIN kinase 2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 LAMGIN 10
LAMG+N
Sbjct: 150 LAMGLN 155
>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 MDNPLAMGI 9
M N LA+GI
Sbjct: 1 MSNLLAIGI 9
6|SequenceR|35|26|DHLDYMDNPL
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 3 LDYMDNPL 10
L YMDNP+
Sbjct: 448 LHYMDNPV 455
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 3 LDYMDNPL 10
LD+++NPL
Sbjct: 70 LDHLNNPL 77
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 2 HLDYMDNP 9
H DY NP
Sbjct: 372 HFDYSSNP 379
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 2 HLDYMDNP 9
H DY NP
Sbjct: 377 HFDYSSNP 384
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 4 DYMDNPL 10
DYM++PL
Sbjct: 2035 DYMEDPL 2041
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 3 LDYMDN 8
LDYMDN
Sbjct: 417 LDYMDN 422
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 3 LDYMDNPL 10
LD+++NPL
Sbjct: 265 LDHLNNPL 272
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 DHLDYMDNP 9
D+L Y+++P
Sbjct: 1023 DYLSYLEDP 1031
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DHLDYMDNP 9
D+L Y+++P
Sbjct: 1045 DYLSYLEDP 1053
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 DHLDYMDNP 9
D+L Y+++P
Sbjct: 1018 DYLSYLEDP 1026
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 LDYMDN 8
LDYMDN
Sbjct: 526 LDYMDN 531
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 LDYMDN 8
LDYMDN
Sbjct: 542 LDYMDN 547
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 LDYMDN 8
+DY+DN
Sbjct: 1166 MDYLDN 1171
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 DHLDYMDNP 9
D LD++D P
Sbjct: 116 DLLDWLDAP 124
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 LDYMDNPL 10
+DY D PL
Sbjct: 405 VDYEDGPL 412
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 3 LDYMDNPL 10
L YM NP+
Sbjct: 448 LSYMSNPV 455
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LDYMDNPL 10
L YM NP+
Sbjct: 448 LSYMSNPV 455
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 DYMDNPL 10
DY+ NPL
Sbjct: 6133 DYLYNPL 6139
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 1 DHLDY 5
DH+DY
Sbjct: 28 DHIDY 32
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 1 DHLDY 5
DH+DY
Sbjct: 28 DHIDY 32
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LDYMDN 8
+DY+DN
Sbjct: 1166 MDYLDN 1171
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 DHLDYMDNP 9
D+ +Y+D P
Sbjct: 657 DNTEYLDAP 665
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 HLDYMDNP 9
H D+ +NP
Sbjct: 652 HFDHDENP 659
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 LDYMDNPL 10
DY NPL
Sbjct: 793 FDYTGNPL 800
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 4 DYMDNPL 10
+Y DNP+
Sbjct: 2040 EYRDNPI 2046
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 HLDYMDNP 9
+LD+ +NP
Sbjct: 293 YLDFQENP 300
>sp|CEP3_HHV6Z|CYTOPLASMIC envelopment protein 3|Human herpesvirus 6B (strain Z29)
Query: 3 LDYMDNPL 10
+DY NP+
Sbjct: 22 MDYKGNPI 29
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 DHLDYMDN 8
D +D++DN
Sbjct: 47 DMIDFIDN 54
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 DHLDY 5
DH+DY
Sbjct: 28 DHIDY 32
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 3 LDYMDN 8
LDYM+N
Sbjct: 419 LDYMEN 424
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 1 DHLDYMDN 8
DH+DY ++
Sbjct: 34 DHIDYWES 41
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 DYMDNPL 10
DY+D P
Sbjct: 1843 DYIDTPF 1849
>sp|CEP3_HHV6U|CYTOPLASMIC envelopment protein 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LDYMDNPL 10
+DY NP+
Sbjct: 22 IDYKGNPI 29
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 DHLDYMDNP 9
D LD++D P
Sbjct: 116 DLLDWLDAP 124
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 1 DHLDY 5
DH+DY
Sbjct: 28 DHIDY 32
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 DYMDNPL 10
DY+ NPL
Sbjct: 6171 DYVYNPL 6177
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 LDYMDNP 9
L+Y++NP
Sbjct: 918 LEYINNP 924
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 LDYMDNP 9
L+Y++NP
Sbjct: 918 LEYINNP 924
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 DYMDNPL 10
DY+ NPL
Sbjct: 6191 DYVYNPL 6197
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 DYMDNPL 10
DY+ NPL
Sbjct: 6221 DYVYNPL 6227
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 DYMDNPL 10
DY+D P
Sbjct: 1843 DYVDTPF 1849
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 LDYMDNPL 10
+DY + PL
Sbjct: 36 VDYQEKPL 43
7|SequenceR|40|31|EAKSLDHLDY
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 AKSLDHLD 9
A++LDH D
Sbjct: 472 AQALDHYD 479
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 4 SLDHLD 9
SLDHL+
Sbjct: 69 SLDHLN 74
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 5 LDHLDY 10
+DH+DY
Sbjct: 27 IDHIDY 32
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 6 DHLDY 10
DH+DY
Sbjct: 28 DHIDY 32
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 6 DHLDY 10
DHLD+
Sbjct: 1561 DHLDF 1565
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 6 DHLDY 10
DHLD+
Sbjct: 1559 DHLDF 1563
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 546 AKSVSHLE 553
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 556 AKSVQHLE 563
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 556 AKSVQHLE 563
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 556 AKSVQHLE 563
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 556 AKSVQHLE 563
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 556 AKSVQHLE 563
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 546 AKSVQHLE 553
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 546 AKSVQHLE 553
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 546 AKSVQHLE 553
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 546 AKSVQHLE 553
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 552 AKSVQHLE 559
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 557 AKSVQHLE 564
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 559 AKSVQHLE 566
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 559 AKSVQHLE 566
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 6 DHLDY 10
DH+DY
Sbjct: 28 DHIDY 32
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 AKSLDHLD 9
AKS+ HL+
Sbjct: 546 AKSVQHLE 553
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton
Query: 4 SLDHLDY 10
+L HLDY
Sbjct: 63 NLSHLDY 69
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain
Query: 4 SLDHLDY 10
+L HLDY
Sbjct: 63 NLSHLDY 69
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 SLDHLDY 10
+L HLDY
Sbjct: 63 NLSHLDY 69
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 SLDHLDY 10
+L HLDY
Sbjct: 63 NLSHLDY 69
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 4 SLDHLD 9
SLDHL+
Sbjct: 264 SLDHLN 269
8|SequenceR|45|36|QPAALEAKSL
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 PAALEAKSL 10
PA L+ KSL
Sbjct: 27 PATLDTKSL 35
9|SequenceR|50|41|ALMILQPAAL
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 ALMILQPAAL 10
A+ +QPAAL
Sbjct: 1220 AVFNIQPAAL 1229
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 4 ILQPAAL 10
IL PAAL
Sbjct: 272 ILSPAAL 278
10|SequenceR|55|46|TLAVNALMIL
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 TLAVNALMI 9
TLAVNAL +
Sbjct: 14 TLAVNALYL 22
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 TLAVNALMI 9
TLA+NAL +
Sbjct: 14 TLAINALYL 22
11|SequenceR|60|51|GNVEGTLAVN
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1577 GNVEGT 1582
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1576 GNVEGT 1581
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1576 GNVEGT 1581
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1576 GNVEGT 1581
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1576 GNVEGT 1581
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1576 GNVEGT 1581
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GNVEGT 6
GNVEGT
Sbjct: 1577 GNVEGT 1582
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 GNVEGT 6
GN+EGT
Sbjct: 1576 GNIEGT 1581
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GNVEGT 6
GN+EGT
Sbjct: 1577 GNIEGT 1582
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 GNVEGTLA 8
GNVEG ++
Sbjct: 375 GNVEGVIS 382
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 4 EGTLAVN 10
EGTLA N
Sbjct: 169 EGTLAYN 175
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 GNVEGTL 7
GN+ GTL
Sbjct: 743 GNLRGTL 749
12|SequenceR|65|56|YDCCSGNVEG
>sp|G7_VACCC|ASSEMBLY protein G7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YDCCSGNVE 9
Y+CC N+E
Sbjct: 56 YNCCESNIE 64
>sp|G7_VACCA|ASSEMBLY protein G7|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YDCCSGNVE 9
Y+CC N+E
Sbjct: 56 YNCCESNIE 64
>sp|G7_VARV|ASSEMBLY protein G7|Variola virus
Query: 1 YDCCSGNVE 9
Y+CC N+E
Sbjct: 56 YNCCESNIE 64
>sp|G7_VAR67|ASSEMBLY protein G7|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YDCCSGNVE 9
Y+CC N+E
Sbjct: 56 YNCCESNIE 64
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 3 CCSGNVE 9
CC+GNV+
Sbjct: 7 CCAGNVK 13
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 3 CCSGN 7
CC+GN
Sbjct: 523 CCTGN 527
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 3 CCSGN 7
CC+GN
Sbjct: 523 CCTGN 527
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 1 YDCCS 5
Y+CCS
Sbjct: 340 YECCS 344
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CSGNVEG 10
C G VEG
Sbjct: 101 CDGEVEG 107
Query: 3 CCSGNV 8
CC G+V
Sbjct: 130 CCCGSV 135
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YDCCSGNVE 9
Y CS N+E
Sbjct: 78 YAACSRNIE 86
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 YDCCSGNVE 9
Y CS N+E
Sbjct: 78 YAACSRNIE 86
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CSGNVEG 10
C G VEG
Sbjct: 101 CDGEVEG 107
Query: 3 CCSGNV 8
CC G+V
Sbjct: 130 CCCGSV 135
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 DCCSGNVE 9
DC S N E
Sbjct: 1302 DCVSSNTE 1309
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 CCSGNVE 9
C SGN E
Sbjct: 1732 CISGNTE 1738
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 DCCSGNVEG 10
DC NV+G
Sbjct: 179 DCSCRNVDG 187
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 1 YDCCSG 6
Y CC G
Sbjct: 105 YGCCPG 110
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 DCCSG 6
DCC G
Sbjct: 608 DCCIG 612
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 DCCSG 6
DCC G
Sbjct: 608 DCCIG 612
>sp|UL147_HCMVT|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 YDCCSGNVE 9
YD S N+E
Sbjct: 121 YDVVSTNIE 129
>sp|UL147_HCMVM|PUTATIVE viral CXC chemokine 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YDCCSGNVE 9
YD S N+E
Sbjct: 121 YDVVSTNIE 129
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YDCCSG 6
Y CC G
Sbjct: 105 YGCCPG 110
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 DCCSG 6
DCC G
Sbjct: 608 DCCIG 612
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 DCCSG 6
DCC G
Sbjct: 608 DCCIG 612
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 DCCSG 6
DCC G
Sbjct: 608 DCCIG 612
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 1 YDCCSGNV 8
Y CC G +
Sbjct: 57 YMCCEGEL 64
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 1 YDCCSGNV 8
Y CC G +
Sbjct: 57 YMCCEGEL 64
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 YDCCSGNV 8
Y CC G +
Sbjct: 57 YMCCGGEL 64
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 YDCCSG 6
YD C G
Sbjct: 6 YDVCKG 11
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 5 SGNVEG 10
SGN EG
Sbjct: 430 SGNTEG 435
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 6 GNVEG 10
GNVEG
Sbjct: 1577 GNVEG 1581
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 6 GNVEG 10
GNVEG
Sbjct: 1576 GNVEG 1580
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 6 GNVEG 10
GNVEG
Sbjct: 1576 GNVEG 1580
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 6 GNVEG 10
GNVEG
Sbjct: 1576 GNVEG 1580
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 6 GNVEG 10
GNVEG
Sbjct: 1576 GNVEG 1580
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 6 GNVEG 10
GNVEG
Sbjct: 1576 GNVEG 1580
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 6 GNVEG 10
GNVEG
Sbjct: 1577 GNVEG 1581
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 DCCSGNVEG 10
DC NV+G
Sbjct: 179 DCFCRNVDG 187
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 DCCSGNVEG 10
DC NV+G
Sbjct: 179 DCFCRNVDG 187
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 DCCSGNVEG 10
DC NV+G
Sbjct: 179 DCFCRNVDG 187
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 DCCSGNVEG 10
DC NV+G
Sbjct: 179 DCFCRNVDG 187
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 YDCCSGNVEG 10
YDC +EG
Sbjct: 1172 YDCKELRLEG 1181
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 3 CCSGNV 8
C SGN+
Sbjct: 355 CLSGNI 360
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 YDCCSGNV 8
Y C GN+
Sbjct: 350 YQCLRGNL 357
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 YDCCSGNV 8
Y C GN+
Sbjct: 350 YQCLRGNL 357
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 YDCCSGNV 8
Y C GN+
Sbjct: 350 YQCLRGNL 357
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 3 CCSGNVEG 10
CC +V+G
Sbjct: 1377 CCVRSVDG 1384
13|SequenceR|70|61|EEGVLYDCCS
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 5 LYDCCS 10
LYDCCS
Sbjct: 274 LYDCCS 279
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 GVLYDCC 9
G L+DCC
Sbjct: 64 GTLHDCC 70
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 GVLYDCC 9
G L+DCC
Sbjct: 64 GTLHDCC 70
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 EEGVLYDCCS 10
EE VL+DC S
Sbjct: 423 EEPVLWDCVS 432
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 5 LYDCCS 10
LY+CCS
Sbjct: 339 LYECCS 344
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 EEGVLYD 7
EEG LYD
Sbjct: 206 EEGALYD 212
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2027 LLYNCC 2032
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2026 LLYNCC 2031
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2026 LLYNCC 2031
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2027 LLYNCC 2032
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2026 LLYNCC 2031
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 1860 LLYNCC 1865
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2026 LLYNCC 2031
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2026 LLYNCC 2031
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2024 LLYNCC 2029
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VLYDCC 9
+LY+CC
Sbjct: 2026 LLYNCC 2031
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human
Query: 4 VLYDCCS 10
+LY CC+
Sbjct: 57 LLYTCCA 63
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 EGVLYDCCS 10
EG++ D CS
Sbjct: 1486 EGLIPDACS 1494
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 EGVLYD 7
EG++YD
Sbjct: 1458 EGIIYD 1463
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 EEGVLYDCCS 10
EEG CCS
Sbjct: 2417 EEGDSVVCCS 2426
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 EEGVLYDCCS 10
EEG CCS
Sbjct: 2416 EEGDSVVCCS 2425
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EEGVLYDC 8
E G LY C
Sbjct: 748 ENGELYTC 755
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EEGVLYDC 8
E G LY C
Sbjct: 748 ENGELYTC 755
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 EEGVLYDCCS 10
EEG CCS
Sbjct: 2434 EEGGSEVCCS 2443
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VLYDCC 9
+LYD C
Sbjct: 6 ILYDSC 11
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EGVLYD 7
EG++YD
Sbjct: 1221 EGLIYD 1226
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EGVLYD 7
EG++YD
Sbjct: 1221 EGLIYD 1226
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EGVLYD 7
EG++YD
Sbjct: 1221 EGLIYD 1226
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 EEGVLYD 7
+EG+LY+
Sbjct: 745 QEGLLYE 751
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 EGVLYDCC 9
EG++ D C
Sbjct: 249 EGIIVDQC 256
14|SequenceR|75|66|EAMQREEGVL
>sp|ORF35_HHV8P|PROTEIN ORF35|Human herpesvirus 8 type P
Query: 1 EAMQREEGVL 10
EA++RE +L
Sbjct: 73 EALKRERSIL 82
>sp|DNB2_ADE41|DNA-BINDING protein|Human adenovirus F serotype 41
Query: 5 REEGVL 10
REEGVL
Sbjct: 224 REEGVL 229
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 MQREEGVL 10
M++EEG++
Sbjct: 146 MEKEEGII 153
15|SequenceR|80|71|GVPMLEAMQR
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PMLEAMQR 10
P L A+QR
Sbjct: 13 PFLRALQR 20
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PMLEAMQR 10
P L A+QR
Sbjct: 13 PFLRALQR 20
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PMLEAMQR 10
P L A+QR
Sbjct: 13 PFLRALQR 20
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 PMLEAMQR 10
P L A+QR
Sbjct: 13 PFLRALQR 20
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 VPMLEAMQR 10
+P LE +QR
Sbjct: 76 LPRLEKLQR 84
16|SequenceR|85|76|SFNNDGVPML
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 SFNNDGVPML 10
SFN DG M+
Sbjct: 219 SFNEDGFLMV 228
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SFNNDGVPML 10
SFN DG M+
Sbjct: 219 SFNEDGFLMV 228
>sp|SPIKE_ADE1H|FIBER protein|Human adenovirus D serotype 15/H9
Query: 1 SFNNDG 6
SFNNDG
Sbjct: 163 SFNNDG 168
>sp|SPIKE_ADE09|FIBER protein|Human adenovirus D serotype 9
Query: 1 SFNNDG 6
SFNNDG
Sbjct: 163 SFNNDG 168
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 SFNNDGVP 8
SFN+ G P
Sbjct: 446 SFNSSGCP 453
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SFNNDGVP 8
SFN+ G P
Sbjct: 446 SFNSSGCP 453
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 SFNNDGVP 8
SFN+ G P
Sbjct: 446 SFNSSGCP 453
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 4 NDGVPML 10
NDG PM+
Sbjct: 251 NDGSPMI 257
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 FNNDGVPM 9
F+N+ VP+
Sbjct: 3709 FSNENVPL 3716
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 SFNND 5
SFNND
Sbjct: 300 SFNND 304
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SFNNDGVPM 9
+ NND VP+
Sbjct: 246 ALNNDYVPI 254
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SFNNDGVPM 9
+ NND VP+
Sbjct: 246 ALNNDYVPI 254
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SFNNDGVPM 9
+ NND VP+
Sbjct: 246 ALNNDYVPI 254
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 2 FNNDGV 7
F+NDG+
Sbjct: 366 FSNDGI 371
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 2 FNNDGV 7
F+NDG+
Sbjct: 366 FSNDGI 371
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 FNNDGV 7
F+NDG+
Sbjct: 366 FSNDGI 371
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 2 FNNDGV 7
F+NDG+
Sbjct: 366 FSNDGI 371
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 2 FNNDGV 7
F+NDG+
Sbjct: 366 FSNDGI 371
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 SFNND 5
SFNND
Sbjct: 300 SFNND 304
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 5 DGVPML 10
DG+P+L
Sbjct: 418 DGIPVL 423
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 5 DGVPML 10
DG+P+L
Sbjct: 417 DGIPVL 422
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 5 DGVPML 10
DG+P+L
Sbjct: 418 DGIPVL 423
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 4 NDGVPML 10
ND VPM+
Sbjct: 367 NDEVPMV 373
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NDGVPML 10
ND VPM+
Sbjct: 367 NDEVPMV 373
>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SFNNDGVPM 9
+FN+DG+ +
Sbjct: 128 AFNDDGIYI 136
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 FNNDG 6
FNNDG
Sbjct: 37 FNNDG 41
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 FNNDG 6
FNNDG
Sbjct: 37 FNNDG 41
17|SequenceR|90|81|GEESDSFNND
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 EESDSFNN 9
E+S+SFNN
Sbjct: 654 EDSNSFNN 661
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 EESDSFNND 10
EES+ FN D
Sbjct: 9 EESNDFNED 17
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 4 SDSFNND 10
SDS NN+
Sbjct: 355 SDSLNNE 361
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 5 DSFNN 9
DSFNN
Sbjct: 346 DSFNN 350
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 2 EESDSFN 8
EE+D FN
Sbjct: 13 EENDDFN 19
18|SequenceR|95|86|EELGEGEESD
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 4 GEGEESD 10
G+GEESD
Sbjct: 207 GDGEESD 213
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LGEGEESD 10
LG+GEE D
Sbjct: 410 LGDGEEED 417
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LGEGEESD 10
LG+GEE D
Sbjct: 410 LGDGEEED 417
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 GEGEESD 10
GEG ES+
Sbjct: 454 GEGNESE 460
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 EGEESD 10
EGEE D
Sbjct: 71 EGEEGD 76
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EELGEGEESD 10
++ GEG E+D
Sbjct: 1129 QDEGEGGEAD 1138
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EELGEGEESD 10
++ GEG E+D
Sbjct: 1130 QDEGEGGEAD 1139
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 EELGEGEESD 10
EE+G G E +
Sbjct: 1367 EEVGLGREGE 1376
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 EELGEGEESD 10
EEL GE+ D
Sbjct: 141 EELLAGEQRD 150
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EELGEG 6
EELG+G
Sbjct: 1248 EELGDG 1253
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EELGEG 6
EELG+G
Sbjct: 1247 EELGDG 1252
19|SequenceR|100|91|KIDASEELGE
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 1 KIDASEELGE 10
+ID S+ELG+
Sbjct: 319 RIDYSQELGK 328
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 KIDASEELGE 10
+ID E+LGE
Sbjct: 281 QIDRLEDLGE 290
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 KIDASEELGE 10
+I+ S+ELG+
Sbjct: 319 RINYSQELGK 328
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 KIDASEELG 9
+IDA+ E+G
Sbjct: 962 EIDAATEVG 970
20|SequenceR|105|96|GHPEGKIDAS
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 138 HVEGKID 144
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 138 HVEGKID 144
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 151 HVEGKID 157
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 152 HVEGKID 158
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 152 HVEGKID 158
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 152 HVEGKID 158
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 152 HVEGKID 158
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 HPEGKID 8
H EGKID
Sbjct: 136 HVEGKID 142
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EGKID
Sbjct: 151 HVEGKID 157
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 HPE-----GKIDAS 10
HPE G++DA+
Sbjct: 268 HPELKKYEGRVDAT 281
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 HPE-----GKIDAS 10
HPE G++DA+
Sbjct: 268 HPELKKYEGRVDAT 281
>sp|VE4_HPV47|PROTEIN E4|Human papillomavirus 47
Query: 1 GHPEGK 6
GHP+GK
Sbjct: 130 GHPQGK 135
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GHPEGKI 7
GH EG++
Sbjct: 151 GHTEGQV 157
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GHPEGKI 7
GH EG++
Sbjct: 151 GHTEGQV 157
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GHPEGKI 7
GH EG++
Sbjct: 151 GHTEGQV 157
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EG+ID
Sbjct: 138 HVEGRID 144
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HPEGKID 8
H EG+ID
Sbjct: 137 HVEGRID 143
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 HPEGKID 8
H EG+ID
Sbjct: 136 HVEGRID 142
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 GHPEGKIDA 9
GH E ++DA
Sbjct: 1854 GHTEPEVDA 1862
21|SequenceR|110|101|EMNELGHPEG
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NELGHPEG 10
++ GHPEG
Sbjct: 192 DKAGHPEG 199
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NELGHPEG 10
++ GHPEG
Sbjct: 192 DKAGHPEG 199
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 5 LGHPEG 10
LGHP G
Sbjct: 218 LGHPAG 223
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NELGHPEG 10
++ GHPEG
Sbjct: 192 DKAGHPEG 199
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NELGHPEG 10
++ GHPEG
Sbjct: 192 DKAGHPEG 199
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 5 LGHPEG 10
LGHP G
Sbjct: 215 LGHPAG 220
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 5 LGHPEG 10
LGHP G
Sbjct: 215 LGHPAG 220
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 3 NELGHPE 9
N GHPE
Sbjct: 45 NTQGHPE 51
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 MNELGHPEG 10
+ GHP G
Sbjct: 194 LGPFGHPRG 202
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MNELGHPEG 10
+NE+ H E
Sbjct: 495 LNEISHAEA 503
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 EMNELGH 7
+ N+LGH
Sbjct: 2045 DTNQLGH 2051
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 EMNELGH 7
+ N+LGH
Sbjct: 2044 DTNQLGH 2050
22|SequenceR|115|106|ELSRLEMNEL
***** No hits found ******
23|SequenceR|120|111|EVVSLELSRL
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 1 EVVSLELSRL 10
EV+SLE +L
Sbjct: 399 EVISLETPQL 408
24|SequenceR|125|116|FVPQPEVVSL
>sp|VE7_HPV26|PROTEIN E7|Human papillomavirus type 26
Query: 1 FVPQPEV 7
VPQPE+
Sbjct: 15 LVPQPEI 21
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 FVPQPEVV 8
F PQP ++
Sbjct: 81 FTPQPSII 88
>sp|VE7_HPV69|PROTEIN E7|Human papillomavirus 69
Query: 1 FVPQPEV 7
VPQPE+
Sbjct: 15 LVPQPEI 21
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 FVPQPEVV 8
F PQP ++
Sbjct: 55 FTPQPAII 62
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 FVPQPEVV 8
F PQP ++
Sbjct: 76 FTPQPSII 83
>sp|OX2V_HHV6Z|PUTATIVE OX-2 membrane glycoprotein homolog|Human herpesvirus 6B (strain
Query: 1 FVPQPE 6
FVP+PE
Sbjct: 20 FVPRPE 25
>sp|VPAP_HHV6Z|DNA polymerase processivity factor|Human herpesvirus 6B (strain Z29)
Query: 1 FVPQPEVV 8
F PQP ++
Sbjct: 56 FTPQPSII 63
>sp|VFLIP_HHV8P|VIRAL FLICE protein|Human herpesvirus 8 type P
Query: 1 FVPQPEVVSL 10
F+PQP + L
Sbjct: 29 FIPQPTLAQL 38
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 1 FVPQPEVVS 9
F+P+P+V S
Sbjct: 246 FLPKPKVAS 254
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 FVPQPEVVSL 10
FVP VVS+
Sbjct: 186 FVPDQSVVSI 195
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 FVPQPEVVSL 10
FVP VVS+
Sbjct: 186 FVPDQSVVSI 195
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 FVPQPEVVSL 10
FVP VVS+
Sbjct: 186 FVPDQSVVSI 195
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 FVPQPE 6
FVP PE
Sbjct: 417 FVPTPE 422
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 FVPQPEV 7
FVP+PE+
Sbjct: 2098 FVPKPEL 2104
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 FVPQPEVVSL 10
+VP PE + L
Sbjct: 151 YVPHPEPIIL 160
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 FVPQPEVVS 9
FVP VVS
Sbjct: 184 FVPDKAVVS 192
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 FVPQPEVVS 9
FVP VVS
Sbjct: 184 FVPDKAVVS 192
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 FVPQPEVVS 9
FVP VVS
Sbjct: 184 FVPDKAVVS 192
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 FVPQPEVVS 9
FVP VVS
Sbjct: 184 FVPDKAVVS 192
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 3 PQPEVVSL 10
P PE++ L
Sbjct: 149 PVPEIIDL 156
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 PQPEVVSL 10
P PE++ L
Sbjct: 149 PVPEIIDL 156
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 PQPEVVSL 10
P PE++ L
Sbjct: 149 PVPEIIDL 156
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 FVPQPE 6
+VPQP+
Sbjct: 244 YVPQPK 249
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 1 FVPQPE 6
FVP PE
Sbjct: 308 FVPVPE 313
25|SequenceR|130|121|AGSAEFVPQP
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 AGSAEFVPQ 9
AGS F PQ
Sbjct: 346 AGSVSFFPQ 354
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 1 AGSAEFVPQ 9
AGS F PQ
Sbjct: 346 AGSVSFFPQ 354
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 AGSAEFVPQ 9
AGS F PQ
Sbjct: 346 AGSVSFFPQ 354
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 1 AGSAEFVPQ 9
AGS F PQ
Sbjct: 346 AGSVSFFPQ 354
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 GSAEFVPQP 10
GSAE P P
Sbjct: 42 GSAELPPVP 50
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 GSAEFVPQP 10
GS+ + P+P
Sbjct: 1188 GSSYYYPEP 1196
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 GSAEFVPQP 10
GS+ + P+P
Sbjct: 1188 GSSYYYPEP 1196
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 GSAEFVPQP 10
GS+ + P+P
Sbjct: 1192 GSSYYYPEP 1200
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 GSAEFVPQP 10
+A+FV QP
Sbjct: 639 ATADFVAQP 647
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 GSAEFVPQP 10
+A+FV QP
Sbjct: 639 ATADFVAQP 647
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 GSAEFVPQP 10
+A+FV QP
Sbjct: 637 ATADFVAQP 645
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 GSAEFVPQP 10
+A+FV QP
Sbjct: 639 ATADFVAQP 647
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 GSAEFVPQP 10
+A+FV QP
Sbjct: 639 ATADFVAQP 647
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 1 AGSAEFVPQP 10
AG+ E P P
Sbjct: 30 AGTVESTPPP 39
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 2 GSAEFVPQP 10
+A+FV QP
Sbjct: 639 ATADFVAQP 647
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 AGSAEFVP 8
AGS+ ++P
Sbjct: 302 AGSSTYIP 309
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 GSAEFVPQP 10
GS+ + P+P
Sbjct: 1188 GSSFYAPEP 1196
26|SequenceR|135|126|SYIDPAGSAE
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 SYIDPAGSAE 10
+Y PAGSA+
Sbjct: 184 AYDQPAGSAD 193
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 SYIDPAGSAE 10
+Y PAGSA+
Sbjct: 184 AYDQPAGSAD 193
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 SYIDPAGSAE 10
+Y PAGSA+
Sbjct: 184 AYDQPAGSAD 193
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 SYIDPAGSAE 10
+Y PAGSA+
Sbjct: 184 AYDQPAGSAD 193
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 SYIDPAGSA 9
+Y++P+G A
Sbjct: 280 TYVNPSGKA 288
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 SYIDPAGSAE 10
+Y PAGSA+
Sbjct: 184 AYDQPAGSAD 193
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 4 DPAGSAE 10
DPAG+ E
Sbjct: 3 DPAGTDE 9
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 3 IDPAGSAE 10
+DPAG+ +
Sbjct: 386 VDPAGTLD 393
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 3 IDPAGSAE 10
+DPAG+ +
Sbjct: 386 VDPAGTLD 393
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 3 IDPAGSAE 10
IDP G+A+
Sbjct: 91 IDPVGAAD 98
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 SYIDPAGSAE 10
SY++ +GS+E
Sbjct: 472 SYVNISGSSE 481
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 SYIDPA 6
SY DPA
Sbjct: 355 SYFDPA 360
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 SYIDPAGSA 9
+Y+ P G A
Sbjct: 281 TYVKPTGKA 289
27|SequenceR|140|131|LDKNSSYIDP
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 LDKNSSYIDP 10
+DKN +YI P
Sbjct: 644 VDKNGTYIQP 653
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 LDKNSSYIDP 10
+DKN +YI P
Sbjct: 642 VDKNGAYIQP 651
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 LDKNSSYIDP 10
+DKN YI P
Sbjct: 641 VDKNGKYIQP 650
>sp|NCAP_SFSV|NUCLEOPROTEIN fever sicilian virus (SFS)
Query: 4 NSSYID 9
NSS+ID
Sbjct: 206 NSSFID 211
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 LDKNSSYI 8
LD NSS++
Sbjct: 360 LDANSSFL 367
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 1 LDKNSSYI 8
LD N+SYI
Sbjct: 377 LDINNSYI 384
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LDKNSSYI 8
LD N+SYI
Sbjct: 377 LDINNSYI 384
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 1 LDKNSSYI 8
LD NSS++
Sbjct: 360 LDANSSFL 367
28|SequenceR|145|136|PTEPPLDKNS
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 EPPLDKNS 10
+PPL++NS
Sbjct: 5143 KPPLNRNS 5150
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 EPPLDKNS 10
+PPL++NS
Sbjct: 5168 KPPLNRNS 5175
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 EPPLDKN 9
+PPL+KN
Sbjct: 5470 KPPLNKN 5476
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 EPPLDKN 9
+PPL+KN
Sbjct: 5508 KPPLNKN 5514
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 EPPLDKN 9
+PPL+KN
Sbjct: 5528 KPPLNKN 5534
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 EPPLDKN 9
+PPL+KN
Sbjct: 5558 KPPLNKN 5564
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 1 PTEPPLDK 8
P EPP D+
Sbjct: 45 PAEPPADE 52
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PT PPLD
Sbjct: 454 PTAPPLD 460
Query: 1 PTEPPLDKN 9
PT PP KN
Sbjct: 124 PTAPPSGKN 132
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PTEPPLDKN 9
PT PP KN
Sbjct: 124 PTAPPSGKN 132
>sp|GJ_HHV2H|ENVELOPE glycoprotein J|Human herpesvirus 2 (strain HG52)
Query: 1 PTEPPL 6
PT PPL
Sbjct: 39 PTHPPL 44
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PTEPPL 6
PTEPPL
Sbjct: 636 PTEPPL 641
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTEPPL 6
PTEPPL
Sbjct: 635 PTEPPL 640
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PT PPLD
Sbjct: 456 PTAPPLD 462
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 PTEPPLDK 8
PTEPP +
Sbjct: 996 PTEPPASR 1003
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PTEPPL 6
PT+PPL
Sbjct: 140 PTDPPL 145
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PTEPPL 6
PT+PPL
Sbjct: 140 PTDPPL 145
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PTEPPL 6
PT+PPL
Sbjct: 140 PTDPPL 145
>sp|VU84_HHV6U|PROTEIN U84|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTEPPLD 7
PTE P+D
Sbjct: 56 PTEKPVD 62
>sp|GAG_HV2SB|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PT PP+D
Sbjct: 455 PTAPPMD 461
>sp|REV_HV2UC|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PTE PLD
Sbjct: 62 PTEEPLD 68
>sp|REV_HV2EH|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PTE PLD
Sbjct: 62 PTEGPLD 68
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 PTEPPLD 7
PT+ PLD
Sbjct: 468 PTDTPLD 474
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 PTEPPLDKNS 10
PT PPL +S
Sbjct: 185 PTAPPLLSHS 194
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PT PP+D
Sbjct: 456 PTAPPID 462
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 PTEPPLD 7
PT+ PLD
Sbjct: 468 PTDTPLD 474
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 PTEPPLD 7
PT PP+D
Sbjct: 456 PTAPPID 462
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 TEPPLD 7
TEPPL+
Sbjct: 1771 TEPPLE 1776
>sp|REV_HV2D1|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PTEPPLDK 8
PT+ PLD+
Sbjct: 64 PTDSPLDR 71
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PTEPPLD 7
PT PPL+
Sbjct: 462 PTAPPLE 468
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 PTEPPLD 7
PT PPL+
Sbjct: 461 PTAPPLE 467
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PTEPPLDKNS 10
P PP+ KNS
Sbjct: 294 PAPPPVTKNS 303
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 1 PTEPPLDKN 9
P E P D+N
Sbjct: 589 PNEFPFDEN 597
>sp|REV_HV2BE|PROTEIN Rev|Human immunodeficiency virus type 2
Query: 1 PTEPPLDK 8
PT+ PLD+
Sbjct: 64 PTDSPLDR 71
29|SequenceR|150|141|KDEAGPTEPP
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 3 EAGPTEPP 10
+ GP EPP
Sbjct: 170 QQGPLEPP 177
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EAGPTEPP 10
+ GP EPP
Sbjct: 170 QQGPLEPP 177
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 5 GPTEPP 10
GP EPP
Sbjct: 171 GPLEPP 176
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 AGPTEPP 10
AGP EPP
Sbjct: 263 AGPLEPP 269
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 AGPTEPP 10
AGP EPP
Sbjct: 263 AGPLEPP 269
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 EAGPTEPP 10
EAG ++PP
Sbjct: 5478 EAGKSKPP 5485
Query: 1 KDEAGPTEPP 10
++EA P E P
Sbjct: 1026 QEEAQPVEVP 1035
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 KDEAGPTEP 9
+ E GPT+P
Sbjct: 1253 RGERGPTKP 1261
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 KDEAGPTEP 9
+ E GPT+P
Sbjct: 1253 RGERGPTKP 1261
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 KDEAGPTEP 9
+ E GPT+P
Sbjct: 1253 RGERGPTKP 1261
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 DEAGPTEP 9
DEAGP+ P
Sbjct: 2500 DEAGPSAP 2507
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 DEAGPTEP 9
D+AGP +P
Sbjct: 389 DDAGPADP 396
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 DEAGPTEP 9
D+AGP +P
Sbjct: 389 DDAGPADP 396
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 DEAGPTEP 9
D+AGP +P
Sbjct: 389 DDAGPADP 396
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GPTEPP 10
GPT PP
Sbjct: 11 GPTTPP 16
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KDEAGPTEPP 10
+DE T PP
Sbjct: 99 RDEGSFTSPP 108
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KDEAGPTEPP 10
+DE T PP
Sbjct: 99 RDEGSFTSPP 108
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 DEAGPTEP 9
D+AGP +P
Sbjct: 389 DDAGPADP 396
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 5 GPTEPP 10
GPT PP
Sbjct: 11 GPTTPP 16
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 DEAGPTEP 9
D+AGP +P
Sbjct: 389 DDAGPADP 396
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 EAGPTEPP 10
+ GPT PP
Sbjct: 378 DEGPTYPP 385
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KDEAGPTEPP 10
++EA P E P
Sbjct: 1026 QEEAQPVEVP 1035
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 DEAGPTE 8
DE+GP E
Sbjct: 3396 DESGPGE 3402
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 3 EAGPTEPP 10
+ GPT PP
Sbjct: 83 DVGPTRPP 90
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 DEAGPTE 8
DEAGP E
Sbjct: 16 DEAGPLE 22
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DEAGPTEPP 10
D GP PP
Sbjct: 573 DLPGPQRPP 581
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 3 EAGPTEPP 10
EAGPT P
Sbjct: 128 EAGPTSRP 135
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 DEAGPTEPP 10
+ GP+ PP
Sbjct: 208 ENGGPSLPP 216
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 3 EAGPTEPP 10
+ GPT PP
Sbjct: 84 DIGPTRPP 91
>sp|VL2_HPV69|MINOR capsid protein L2|Human papillomavirus 69
Query: 3 EAGPTEPP 10
+ GPT PP
Sbjct: 84 DIGPTRPP 91
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 5 GPTEPP 10
GPT PP
Sbjct: 142 GPTRPP 147
30|SequenceR|155|146|KSSKGKDEAG
***** No hits found ******
31|SequenceR|160|151|RFPKTKSSKG
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 FPKTKSSKG 10
+P+TK +KG
Sbjct: 211 YPQTKPTKG 219
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 FPKTKS 7
FP+TKS
Sbjct: 912 FPQTKS 917
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 FPKTKS 7
FP+TKS
Sbjct: 912 FPQTKS 917
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 FPKTKS 7
FP+TKS
Sbjct: 912 FPQTKS 917
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 FPKTKSS 8
FP TK+S
Sbjct: 773 FPSTKTS 779
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 FPKTKSSK 9
+PKTK+++
Sbjct: 1894 YPKTKNNE 1901
32|SequenceR|165|156|QCPKCRFPKT
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 QCPKC 5
+CPKC
Sbjct: 1317 RCPKC 1321
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 PKCRFP 8
P+C+FP
Sbjct: 2282 PRCKFP 2287
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QCPKCRFP 8
+CPK FP
Sbjct: 269 ECPKFVFP 276
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QCPKCRFP 8
+CPK FP
Sbjct: 269 ECPKFVFP 276
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPKCRFPKT 10
CP+ R P+T
Sbjct: 1174 CPRRRSPRT 1182
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 CPKCR 6
CP+CR
Sbjct: 626 CPECR 630
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CPKCRFPKT 10
CP+ R P+T
Sbjct: 1173 CPRRRSPRT 1181
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPKCRFPKT 10
CP+ R P+T
Sbjct: 1175 CPRRRSPRT 1183
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 QCPKC 5
+CPKC
Sbjct: 18 ECPKC 22
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 1 QCPKCRFPKT 10
Q PKC F T
Sbjct: 57 QIPKCLFGYT 66
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 2 CPKCR 6
CP+CR
Sbjct: 625 CPECR 629
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 QCPKC 5
+CPKC
Sbjct: 18 ECPKC 22
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 QCPKC 5
+CPKC
Sbjct: 18 ECPKC 22
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 CPKCR 6
CP+CR
Sbjct: 627 CPECR 631
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 QCPKC 5
+CPKC
Sbjct: 18 ECPKC 22
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 CPKC 5
CPKC
Sbjct: 69 CPKC 72
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 CPKC 5
CPKC
Sbjct: 69 CPKC 72
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 CPKC 5
CPKC
Sbjct: 62 CPKC 65
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 CPKC 5
CPKC
Sbjct: 62 CPKC 65
>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 2 CPKCR 6
CP CR
Sbjct: 43 CPACR 47
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 1 QCPKCRFP 8
QCP CR P
Sbjct: 53 QCPLCRCP 60
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 2 CPKCR 6
CP CR
Sbjct: 43 CPACR 47
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 2 CPKCR 6
CP CR
Sbjct: 43 CPACR 47
>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)
Query: 2 CPKCR 6
CP CR
Sbjct: 43 CPACR 47
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 CPKC 5
CPKC
Sbjct: 19 CPKC 22
>sp|Z_LYCVT|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 QCPKCRFP 8
+CP C++P
Sbjct: 64 RCPLCKYP 71
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 CPKCR 6
CP CR
Sbjct: 219 CPICR 223
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 CPKCR 6
CP CR
Sbjct: 219 CPICR 223
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d
Query: 2 CPKC 5
CPKC
Sbjct: 19 CPKC 22
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CPKCR 6
CP CR
Sbjct: 222 CPICR 226
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 CPKC 5
CPKC
Sbjct: 1188 CPKC 1191
>sp|Z_LYCVA|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 QCPKCRFP 8
+CP C++P
Sbjct: 64 RCPLCKYP 71
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 CPKC 5
CPKC
Sbjct: 1186 CPKC 1189
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 1 QCPKCRFPK 9
Q PKC P+
Sbjct: 27 QIPKCPDPE 35
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 PKCRFP 8
PK RFP
Sbjct: 2281 PKSRFP 2286
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 2 CPKCR 6
CP CR
Sbjct: 222 CPICR 226
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 2 CPKCR 6
CP CR
Sbjct: 222 CPICR 226
>sp|VE7_HPV94|PROTEIN E7|Human papillomavirus type 94
Query: 2 CPKCRFP 8
CPKC P
Sbjct: 50 CPKCSLP 56
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 CPKCR 6
CP CR
Sbjct: 222 CPICR 226
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 QCPKCRFPK 9
Q PKC P+
Sbjct: 27 QIPKCPDPE 35
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 2 CPKCR 6
CP CR
Sbjct: 222 CPICR 226
>sp|Z_LYCVP|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 QCPKCRFP 8
+CP C++P
Sbjct: 43 RCPLCKYP 50
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 4 KCRFPKT 10
+CRFP +
Sbjct: 112 RCRFPNS 118
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 CPKCRF 7
CPKC +
Sbjct: 1175 CPKCAY 1180
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 4 KCRFPKT 10
+CRFP +
Sbjct: 112 RCRFPNS 118
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 4 KCRFPKT 10
+CRFP +
Sbjct: 111 RCRFPNS 117
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CPKCR 6
CP CR
Sbjct: 23 CPFCR 27
>sp|VE7_HPV49|PROTEIN E7|Human papillomavirus type 49
Query: 2 CPKCR 6
CP+CR
Sbjct: 91 CPQCR 95
>sp|VE7_HPV19|PROTEIN E7|Human papillomavirus 19
Query: 2 CPKCR 6
CP+CR
Sbjct: 90 CPECR 94
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 PKCRFP 8
PK RFP
Sbjct: 2277 PKKRFP 2282
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 2 CPKCR 6
CP CR
Sbjct: 88 CPTCR 92
>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12
Query: 2 CPKCR 6
CP+CR
Sbjct: 91 CPECR 95
>sp|VE7_HPV24|PROTEIN E7|Human papillomavirus 24
Query: 2 CPKCR 6
CP CR
Sbjct: 83 CPDCR 87
>sp|VE7_HPV09|PROTEIN E7|Human papillomavirus 9
Query: 2 CPKCR 6
CP+CR
Sbjct: 83 CPECR 87
33|SequenceR|170|161|SEAEYQCPKC
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YQCPKC 10
YQ PKC
Sbjct: 56 YQVPKC 61
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 5 YQCPKC 10
YQ PKC
Sbjct: 56 YQVPKC 61
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 5 YQCPKC 10
YQ PKC
Sbjct: 56 YQVPKC 61
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 5 YQCPKC 10
YQ PKC
Sbjct: 56 YQIPKC 61
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 6 QCPKC 10
QCP+C
Sbjct: 1149 QCPQC 1153
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 6 QCPKC 10
QCP+C
Sbjct: 1149 QCPQC 1153
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 EAEYQCP 8
EA+Y CP
Sbjct: 157 EAKYWCP 163
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SEAEYQC 7
SEA+Y+C
Sbjct: 2899 SEADYRC 2905
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SEAEYQC 7
SEA+Y+C
Sbjct: 2899 SEADYRC 2905
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 EYQCP 8
EY+CP
Sbjct: 175 EYECP 179
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 177 YECPK 181
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 5 YQCPK 9
Y+CPK
Sbjct: 176 YECPK 180
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 105 YECPK 109
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 SEAEYQCPKC 10
S E++CP C
Sbjct: 798 SRNEHRCPHC 807
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 YQCPK 9
Y+CPK
Sbjct: 178 YECPK 182
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 SEAEYQCPK 9
S EY CP+
Sbjct: 573 SANEYSCPE 581
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 4 EYQCPKC 10
+Y CP C
Sbjct: 20 KYTCPFC 26
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 4 EYQCPKC 10
+Y CP C
Sbjct: 20 KYTCPFC 26
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 4 EYQCPKC 10
+Y CP C
Sbjct: 20 KYTCPFC 26
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 4 EYQCPKC 10
+Y CP C
Sbjct: 20 KYTCPFC 26
>sp|PG096_VARV|PROTEIN OPG096|Variola virus
Query: 4 EYQCP 8
E+QCP
Sbjct: 30 EHQCP 34
>sp|PG096_VAR67|PROTEIN OPG096|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 EYQCP 8
E+QCP
Sbjct: 30 EHQCP 34
>sp|PG096_VACCC|PROTEIN OPG096|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 EYQCP 8
E+QCP
Sbjct: 30 EHQCP 34
>sp|PG096_VACCA|PROTEIN OPG096|Vaccinia virus (strain Ankara) (VACV)
Query: 4 EYQCP 8
E+QCP
Sbjct: 30 EHQCP 34
>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)
Query: 4 EYQCP 8
E+QCP
Sbjct: 30 EHQCP 34
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 4 EYQCP 8
EY CP
Sbjct: 167 EYNCP 171
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 4 EYQCPK 9
EYQC K
Sbjct: 142 EYQCKK 147
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 SEAEYQC 7
+EA+Y+C
Sbjct: 2925 NEADYRC 2931
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SEAEYQC 7
+EA+Y+C
Sbjct: 2925 NEADYRC 2931
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 AEYQCPKC 10
A+ QCP C
Sbjct: 572 ADGQCPYC 579
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 4 EYQCPKC 10
E QCP C
Sbjct: 571 EGQCPYC 577
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 EYQCPKC 10
E QCP C
Sbjct: 571 EGQCPYC 577
34|SequenceR|175|166|VFQEESEAEY
>sp|NEC2_HHV7J|NUCLEAR egress protein 2|Human herpesvirus 7 (strain JI)
Query: 2 FQEESEAEY 10
F ESE+EY
Sbjct: 148 FGPESESEY 156
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 VFQEESEAE 9
VF+E EAE
Sbjct: 424 VFKEGDEAE 432
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 VFQEESEAE 9
VF+E EAE
Sbjct: 424 VFKEGDEAE 432
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 VFQEESEAE 9
VF+E EAE
Sbjct: 424 VFKEGDEAE 432
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 EESEAEY 10
EE+EAE+
Sbjct: 1730 EEAEAEW 1736
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 EESEAEY 10
EE+EAE+
Sbjct: 1760 EEAEAEW 1766
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 VFQEESEAE 9
VF+ + EAE
Sbjct: 424 VFKNDDEAE 432
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 VFQEESEAE 9
VF+ + EAE
Sbjct: 424 VFKRDDEAE 432
35|SequenceR|180|171|VRIHHVFQEE
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 VRIHHVFQEE 10
V IHH F E
Sbjct: 418 VSIHHQFSSE 427
>sp|KBZIP_HHV8P|E3 SUMO-protein ligase K-bZIP|Human herpesvirus 8 type P
Query: 2 RIHHVFQEE 10
R+H F+EE
Sbjct: 130 RLHRKFEEE 138
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 3 IHHVFQEE 10
++H F EE
Sbjct: 55 VYHAFDEE 62
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 VRIHHVFQE 9
VR+ H++ E
Sbjct: 449 VRLPHIYHE 457
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 HHVFQ 8
HHVF+
Sbjct: 1763 HHVFE 1767
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 HHVFQ 8
HHVF+
Sbjct: 1752 HHVFE 1756
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 HHVFQ 8
HHVF+
Sbjct: 1784 HHVFE 1788
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 RIHHVFQEE 10
R+ +VF+EE
Sbjct: 266 RVFNVFREE 274
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 RIHHVFQE 9
RIH +F E
Sbjct: 216 RIHQLFSE 223
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 2 RIHHVFQE 9
RIH +F E
Sbjct: 216 RIHQLFSE 223
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 IHHVFQE 9
+HH+ +E
Sbjct: 898 VHHIMEE 904
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 HHVFQ 8
HH+F+
Sbjct: 1752 HHIFE 1756
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 4 HHVFQE 9
H +FQE
Sbjct: 204 HEIFQE 209
36|SequenceR|185|176|KKASHVRIHH
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 441 ASHVRVN 447
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 ASHVRIH 9
ASHVR++
Sbjct: 462 ASHVRVN 468
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 3 ASHVRIH 9
A+H R+H
Sbjct: 323 ATHKRVH 329
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 3 ASHVRIH 9
A+H R+H
Sbjct: 323 ATHKRVH 329
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 3 ASHVRIH 9
A+H R+H
Sbjct: 323 ATHKRVH 329
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 KKASHVRIH 9
++ +HVR H
Sbjct: 1452 EEVTHVRAH 1460
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 KKASHVRIH 9
++ +HVR H
Sbjct: 1452 EEVTHVRAH 1460
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ASHVRIHH 10
SH R+ H
Sbjct: 286 GSHSRVEH 293
37|SequenceR|190|181|EEVFFKKASH
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EEVFFKKASH 10
EE+F+ A+H
Sbjct: 6289 EELFYSYATH 6298
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EEVFFKKASH 10
EE+F+ A+H
Sbjct: 6266 EELFYSYATH 6275
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 EVFFKKAS 9
E+FFK+ S
Sbjct: 132 EIFFKRLS 139
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 EEVFFKKASH 10
EE+ F +A H
Sbjct: 1642 EELVFGRAGH 1651
>sp|GN_HHV7J|ENVELOPE glycoprotein N|Human herpesvirus 7 (strain JI)
Query: 1 EEVFFKKASH 10
EE+F+K H
Sbjct: 30 EELFYKPTCH 39
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 4 FFKKASH 10
+FK+ SH
Sbjct: 557 YFKRESH 563
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 1 EEVFFKKASH 10
++VFF SH
Sbjct: 57 DKVFFSILSH 66
38|SequenceR|195|186|QKEASEEVFF
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 5 SEEVFF 10
SEE+FF
Sbjct: 445 SEEIFF 450
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QKEASEEV 8
++EA+EE+
Sbjct: 105 EREANEEI 112
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QKEASEEV 8
++EA+EE+
Sbjct: 105 EREANEEI 112
39|SequenceR|200|191|ERAKAQKEAS
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 ERAKAQ 6
ERAKAQ
Sbjct: 896 ERAKAQ 901
40|SequenceR|205|196|TSSGSERAKA
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 TSSGSERAKA 10
+ SGS RAKA
Sbjct: 240 SRSGSIRAKA 249
41|SequenceR|210|201|DGEEATSSGS
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EEATSS 8
EEATSS
Sbjct: 297 EEATSS 302
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 GEEATSSGS 10
G EAT +GS
Sbjct: 479 GSEATFTGS 487
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 GEEATSSGS 10
G EAT +GS
Sbjct: 479 GSEATFTGS 487
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EEATSS 8
EEATSS
Sbjct: 297 EEATSS 302
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 2 GEEATSSGS 10
G EAT +GS
Sbjct: 479 GSEATFTGS 487
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 DGEEATSSG 9
D E+A S+G
Sbjct: 812 DSEQAASAG 820
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 2 GEEATSSGS 10
G EAT +GS
Sbjct: 479 GSEATFTGS 487
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DGEEATSS 8
DG++AT+S
Sbjct: 1899 DGDDATAS 1906
42|SequenceR|215|206|PGKSFDGEEA
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 FDGEE 9
FDGEE
Sbjct: 889 FDGEE 893
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGKSFDGE 8
PGK D E
Sbjct: 368 PGKGSDAE 375
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 GKSFDGEE 9
G+S DGE+
Sbjct: 121 GRSEDGEK 128
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PGKSFDGEE 9
PGK GE+
Sbjct: 2233 PGKQRSGED 2241
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 1 PGKSFDGE 8
PGK +GE
Sbjct: 107 PGKFVNGE 114
43|SequenceR|220|211|RDCRIPGKSF
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 RDCRIP 6
R+CRIP
Sbjct: 41 RNCRIP 46
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 RDCRIP 6
R+CRIP
Sbjct: 41 RNCRIP 46
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 RDCRIP 6
R+CRIP
Sbjct: 41 RNCRIP 46
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 RDCRIP 6
R+CRIP
Sbjct: 41 RNCRIP 46
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 RDCRIP 6
R+CRIP
Sbjct: 41 RNCRIP 46
>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 128 RIPGKS 133
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 128 RIPGKS 133
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 128 RIPGKS 133
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 125 RIPGKS 130
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 128 RIPGKS 133
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 128 RIPGKS 133
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 125 RIPGKS 130
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 125 RIPGKS 130
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 4 RIPGKS 9
RIPGKS
Sbjct: 128 RIPGKS 133
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 RDCRIPGKS 9
R CRIP ++
Sbjct: 616 RPCRIPVRA 624
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RDCRIPGKS 9
R CRIP ++
Sbjct: 616 RPCRIPVRA 624
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 4 RIPGKS 9
R+PGKS
Sbjct: 128 RVPGKS 133
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 4 RIPGKS 9
R+PGKS
Sbjct: 128 RVPGKS 133
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 4 RIPGKS 9
R+PGKS
Sbjct: 128 RVPGKS 133
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 4 RIPGKS 9
R+PGKS
Sbjct: 125 RVPGKS 130
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 RIPGKS 9
R+PGKS
Sbjct: 128 RVPGKS 133
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 RDCRIP 6
R CR+P
Sbjct: 2689 RSCRVP 2694
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 RDCRIP 6
R CR+P
Sbjct: 2689 RSCRVP 2694
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 397 RNCRAPRK 404
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 406 RNCRAPRK 413
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 398 RNCRAPRK 405
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 409 RNCRAPRK 416
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 402 RNCRAPRK 409
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 407 RNCRAPRK 414
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 398 RNCRAPRK 405
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 398 RNCRAPRK 405
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 400 RNCRAPRK 407
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 404 RNCRAPRK 411
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 400 RNCRAPRK 407
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 404 RNCRAPRK 411
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 404 RNCRAPRK 411
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 CRIPGKSF 10
C++PG F
Sbjct: 2119 CQVPGPEF 2126
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 407 RNCRAPRK 414
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|ORF57_VZVO|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DCRIPGKS 9
DCR GKS
Sbjct: 46 DCRKHGKS 53
>sp|ORF57_VZVD|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DCRIPGKS 9
DCR GKS
Sbjct: 46 DCRKHGKS 53
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 398 RNCRAPRK 405
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 409 RNCRAPRK 416
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 402 RNCRAPRK 409
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 400 RNCRAPRK 407
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 CRIPGKSF 10
C I GK+F
Sbjct: 480 CTIAGKAF 487
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 CRIPGKSF 10
C I GK+F
Sbjct: 480 CTIAGKAF 487
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 398 RNCRAPRK 405
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 400 RNCRAPRK 407
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 398 RNCRAPRK 405
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 397 RNCRAPRK 404
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 404 RNCRAPRK 411
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 1 RDCRIP 6
R+CR P
Sbjct: 83 RECRTP 88
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 404 RNCRAPRK 411
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|REV_HV1ZH|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 DCRIPGKS 9
D +IPGKS
Sbjct: 73 DSQIPGKS 80
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 403 RNCRAPRK 410
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 404 RNCRAPRK 411
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 RDCRIP 6
R CR+P
Sbjct: 43 RTCRLP 48
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RDCRIPGK 8
R+CR P K
Sbjct: 406 RNCRAPRK 413
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 RDCRIPG 7
+DC IP
Sbjct: 819 KDCSIPA 825
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 DCRIP 6
DC+IP
Sbjct: 820 DCQIP 824
>sp|SEMA_VAR67|SEMAPHORIN-LIKE protein A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DCRIPGKSF 10
+C I G+S+
Sbjct: 77 ECDIDGRSY 85
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CRIPGKSF 10
CR P K+F
Sbjct: 200 CRDPDKAF 207
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CRIPGKSF 10
CR P K+F
Sbjct: 131 CRDPDKAF 138
44|SequenceR|225|216|TNYGCRDCRI
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 3 YGCRDCR 9
+ CRDC+
Sbjct: 185 HACRDCK 191
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YGCRDCR 9
+ CRDC+
Sbjct: 185 HACRDCK 191
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 YGCRDCR 9
+ CRDC+
Sbjct: 185 HACRDCK 191
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 YGCRDCR 9
+ CRDC+
Sbjct: 185 HACRDCK 191
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 NYGCRDC 8
++ CRDC
Sbjct: 1103 DWCCRDC 1109
>sp|PG027_VARV|INTERFERON antagonist OPG027|Variola virus
Query: 2 NYGCR 6
NYGC+
Sbjct: 27 NYGCK 31
>sp|PG027_VAR67|INTERFERON antagonist OPG027|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NYGCR 6
NYGC+
Sbjct: 27 NYGCK 31
>sp|PG027_VACCC|INTERFERON antagonist OPG027|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NYGCR 6
NYGC+
Sbjct: 27 NYGCK 31
>sp|PG027_VACCA|INTERFERON antagonist OPG027|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NYGCR 6
NYGC+
Sbjct: 27 NYGCK 31
>sp|PG027_MONPZ|INTERFERON antagonist OPG027|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 NYGCR 6
NYGC+
Sbjct: 27 NYGCK 31
>sp|PG027_MONPV|INTERFERON antagonist OPG027|Monkeypox virus (MPXV)
Query: 2 NYGCR 6
NYGC+
Sbjct: 27 NYGCK 31
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 GCRDCR 9
GC +CR
Sbjct: 542 GCEECR 547
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 TNYGCRDC 8
++Y C DC
Sbjct: 228 SSYRCSDC 235
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 3 YGCRDC 8
+GCR C
Sbjct: 152 HGCRSC 157
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 3 YGCRDC 8
+GCR C
Sbjct: 152 HGCRSC 157
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 3 YGCRDCR 9
Y C+ CR
Sbjct: 138 YNCKMCR 144
>sp|VE7_HPV05|PROTEIN E7|Human papillomavirus 5
Query: 4 GCRDCRI 10
GCR+C +
Sbjct: 57 GCRNCEV 63
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NYGCR 6
NYGC+
Sbjct: 247 NYGCK 251
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NYGCR 6
NYGC+
Sbjct: 247 NYGCK 251
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NYGCR 6
NYGC+
Sbjct: 247 NYGCK 251
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 NYGCRD 7
NY CRD
Sbjct: 260 NYYCRD 265
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 NYGCRDC 8
N+ C DC
Sbjct: 2418 NWNCVDC 2424
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 YGCRDCR 9
YG RD R
Sbjct: 2531 YGARDVR 2537
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NYGCRDC 8
+Y C DC
Sbjct: 71 SYDCLDC 77
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 NYGCRDC 8
N+ C DC
Sbjct: 2418 NWNCVDC 2424
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8])
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 2 NYGC 5
NYGC
Sbjct: 1000 NYGC 1003
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 3 YGCRDC 8
+GC+ C
Sbjct: 161 HGCKSC 166
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 3 YGCR 6
YGCR
Sbjct: 153 YGCR 156
>sp|VE7_HPV5B|PROTEIN E7|Human papillomavirus type 5b
Query: 4 GCRDCRI 10
GCR C +
Sbjct: 57 GCRHCEV 63
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GCRDCR 9
GC +CR
Sbjct: 902 GCVECR 907
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 GCRDCR 9
GC +CR
Sbjct: 579 GCVECR 584
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 3 YGCRDCRI 10
+ C+DC +
Sbjct: 458 FRCQDCNL 465
45|SequenceR|230|221|HDYRNTNYGC
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 YRNTNY 8
YR TNY
Sbjct: 1281 YRTTNY 1286
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 1 HDYRNTNYG 9
+DY++ N+G
Sbjct: 362 NDYQDPNFG 370
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 2 DYRNT 6
DYRNT
Sbjct: 11 DYRNT 15
>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2
Query: 2 DYRNT 6
DYRNT
Sbjct: 11 DYRNT 15
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 HDYRNTNY 8
H YR NY
Sbjct: 2828 HPYRTWNY 2835
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 HDYRNTNY 8
H YR NY
Sbjct: 2825 HPYRTWNY 2832
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 HDYRNTNY 8
H YR NY
Sbjct: 2820 HPYRTWNY 2827
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 HDYRNTNY 8
H YR NY
Sbjct: 2828 HPYRTWNY 2835
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 4 RNTNYGC 10
++TNY C
Sbjct: 219 KSTNYSC 225
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 YRNTNY 8
YR TNY
Sbjct: 1356 YRTTNY 1361
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 YRNTNY 8
YR TNY
Sbjct: 1356 YRTTNY 1361
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 YRNTNY 8
YR TNY
Sbjct: 1356 YRTTNY 1361
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 HDYRNTNY 8
+DY N NY
Sbjct: 224 NDYPNMNY 231
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 1 HDYRNTN 7
+DY NTN
Sbjct: 555 YDYLNTN 561
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HDYRNTN 7
+DY NTN
Sbjct: 555 YDYLNTN 561
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 1 HDYRNTN 7
+DY NTN
Sbjct: 555 YDYLNTN 561
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HDYRNTN 7
+DY NTN
Sbjct: 555 YDYLNTN 561
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 1 HDYRNTN 7
+DY NTN
Sbjct: 555 YDYLNTN 561
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 4 RNTNYGC 10
++TNY C
Sbjct: 215 QSTNYSC 221
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 3 YRNTNY 8
Y+NTN+
Sbjct: 355 YKNTNF 360
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 4 RNTNY 8
RNTNY
Sbjct: 885 RNTNY 889
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 4 RNTNY 8
RNTNY
Sbjct: 885 RNTNY 889
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 4 RNTNY 8
RNTNY
Sbjct: 885 RNTNY 889
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 4 RNTNY 8
RNTNY
Sbjct: 884 RNTNY 888
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 HDYRNTN 7
DY NTN
Sbjct: 176 QDYINTN 182
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HDYRNTN 7
DY NTN
Sbjct: 176 QDYINTN 182
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 HDYRNTN 7
H YRN +
Sbjct: 508 HQYRNVS 514
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 HDYRNTN 7
H YRN +
Sbjct: 508 HQYRNVS 514
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 HDYRNTNY 8
H++R T Y
Sbjct: 287 HNHRKTKY 294
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 1 HDYRNTNYGC 10
HD N N C
Sbjct: 222 HDGVNPNMSC 231
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 HDYRNTNY 8
H++R T Y
Sbjct: 287 HNHRKTKY 294
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 1 HDYRNTNY 8
H++R T Y
Sbjct: 287 HNHRKTKY 294
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 HDYRNTNYG 9
HD T YG
Sbjct: 773 HDDAETQYG 781
46|SequenceR|235|226|LHATYHDYRN
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 213 TYHSYAN 219
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 213 TYHSYAN 219
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 213 TYHSYAN 219
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 212 TYHSYAN 218
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 212 TYHSYAN 218
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 212 TYHSYAN 218
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 213 TYHSYAN 219
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 212 TYHSYAN 218
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 3 ATYHDYRN 10
+T H YRN
Sbjct: 505 STKHQYRN 512
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 3 ATYHDYRN 10
+T H YRN
Sbjct: 505 STKHQYRN 512
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 213 TYHSYAN 219
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 4 TYHDYRN 10
TYH Y N
Sbjct: 212 TYHSYAN 218
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 LHATYHDYRN 10
++ T+H YRN
Sbjct: 2000 INHTHHVYRN 2009
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 LHATYHDYRN 10
++ T+H YRN
Sbjct: 2000 INHTHHVYRN 2009
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 LHATYHDY 8
LHA Y DY
Sbjct: 3 LHAAYIDY 10
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ATYHDYR 9
TYH YR
Sbjct: 282 GTYHHYR 288
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LHATYHDYRN 10
++ T+H YRN
Sbjct: 2000 INHTHHIYRN 2009
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 LHATYHDYRN 10
++ T+H YRN
Sbjct: 2000 INHTHHVYRN 2009
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LHATYHDYRN 10
++ T+H YRN
Sbjct: 2000 INHTHHVYRN 2009
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 LHATYHDY 8
LH+ Y DY
Sbjct: 131 LHSPYPDY 138
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 ATYHDY 8
+TYH+Y
Sbjct: 437 STYHNY 442
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 2 HATYHDY 8
HA Y DY
Sbjct: 5 HAAYIDY 11
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 865 IHAVAPDYR 873
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 851 IHAVAPDYR 859
>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40
Query: 1 LHATYHDYRN 10
LH + YRN
Sbjct: 69 LHGKVNQYRN 78
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 851 IHAVAPDYR 859
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 866 IHAVAPDYR 874
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 851 IHAVAPDYR 859
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 849 IHAVAPDYR 857
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 851 IHAVAPDYR 859
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 LHATYHDYR 9
+HA DYR
Sbjct: 866 IHAVAPDYR 874
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 ATYHDYRN 10
A YH Y N
Sbjct: 1977 ALYHTYTN 1984
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 2 HATYHDY 8
HA Y DY
Sbjct: 5 HAAYIDY 11
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 2 HATYHDY 8
HA Y DY
Sbjct: 5 HAAYIDY 11
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 HATYHDY 8
HA Y DY
Sbjct: 5 HAAYIDY 11
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HATYHDY 8
HA Y DY
Sbjct: 5 HAAYIDY 11
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 2 HATYHDY 8
HA Y DY
Sbjct: 5 HAAYIDY 11
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 5 YHDYR 9
YH+YR
Sbjct: 31 YHEYR 35
>sp|GI_HHV11|ENVELOPE glycoprotein I|Human herpesvirus 1 (strain 17)
Query: 2 HATYHD 7
H TY+D
Sbjct: 66 HTTYYD 71
>sp|GI_CHV1|ENVELOPE glycoprotein I|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 HATYHD 7
H TY+D
Sbjct: 65 HVTYYD 70
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 HATYHD 7
H T+HD
Sbjct: 274 HTTHHD 279
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 7020 MHANYLFWRN 7029
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 LHATYH 6
LH TYH
Sbjct: 231 LHFTYH 236
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 6683 IHANYVFWRN 6692
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 LHATYH 6
LH TYH
Sbjct: 231 LHFTYH 236
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 3 ATYHDY 8
AT HDY
Sbjct: 189 ATNHDY 194
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 7057 MHANYLFWRN 7066
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 7077 MHANYLFWRN 7086
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 7107 MHANYLFWRN 7116
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LHATYHD 7
LH Y+D
Sbjct: 911 LHGVYYD 917
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LHATYHD 7
LH Y+D
Sbjct: 911 LHGVYYD 917
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 7022 MHANYIFWRN 7031
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 6999 MHANYIFWRN 7008
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LHATYHDYRN 10
+HA Y +RN
Sbjct: 6999 MHANYIFWRN 7008
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 YHDYRN 10
Y DY+N
Sbjct: 2219 YDDYKN 2224
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 HATYHDY 8
+A Y+DY
Sbjct: 2064 NAAYYDY 2070
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 HATYHDY 8
+A Y+DY
Sbjct: 2064 NAAYYDY 2070
47|SequenceR|240|231|RTHHKLHATY
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 4 HKLHA 8
HKLHA
Sbjct: 304 HKLHA 308
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 THHKLH 7
TH++LH
Sbjct: 331 THNRLH 336
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 RTHHKLH 7
+T+H++H
Sbjct: 548 KTYHRMH 554
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 THHKLHA 8
TH++ HA
Sbjct: 498 THYRAHA 504
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 THHKLHA 8
TH++ HA
Sbjct: 498 THYRAHA 504
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 THHKLHA 8
TH++ HA
Sbjct: 498 THYRAHA 504
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 THHKLHA 8
TH++ HA
Sbjct: 498 THYRAHA 504
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 THHKLHA 8
TH++ HA
Sbjct: 498 THYRAHA 504
48|SequenceR|245|236|ENDGARTHHK
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 DGARTHH 9
+G RTHH
Sbjct: 513 NGTRTHH 519
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 DGARTHH 9
+G RTHH
Sbjct: 513 NGTRTHH 519
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 5 ARTHHK 10
+RTHHK
Sbjct: 897 SRTHHK 902
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 DGARTH 8
+GARTH
Sbjct: 597 NGARTH 602
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 3 DGARTH 8
+GARTH
Sbjct: 566 NGARTH 571
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 2 NDGARTHHK 10
N+G HH+
Sbjct: 415 NEGVSIHHQ 423
>sp|VL2_HPV1|MINOR capsid protein L2|Human papillomavirus type 1 (Human
Query: 4 GARTH 8
GARTH
Sbjct: 347 GARTH 351
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 DGARTH 8
DGA TH
Sbjct: 382 DGANTH 387
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 DGARTH 8
DGA TH
Sbjct: 382 DGANTH 387
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 NDGART 7
N+GART
Sbjct: 225 NEGART 230
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 ENDGARTHH 9
EN G T+H
Sbjct: 414 ENTGTGTYH 422
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 DGARTH 8
DGART+
Sbjct: 620 DGARTY 625
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 DGARTH 8
DGART+
Sbjct: 1951 DGARTY 1956
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 4 GARTHHK 10
G+RTH++
Sbjct: 1355 GSRTHYR 1361
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 4 GARTHHK 10
G+RTH++
Sbjct: 1356 GSRTHYR 1362
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 4 GARTHHK 10
G+RTH++
Sbjct: 1355 GSRTHYR 1361
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 NDGART 7
N+GART
Sbjct: 233 NEGART 238
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 NDGART 7
N+GART
Sbjct: 240 NEGART 245
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 NDGART 7
N+GART
Sbjct: 240 NEGART 245
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 NDGART 7
N+GART
Sbjct: 233 NEGART 238
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 NDGART 7
N+GART
Sbjct: 233 NEGART 238
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ARTHH 9
+RTHH
Sbjct: 2 SRTHH 6
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 NDGART 7
N+GART
Sbjct: 242 NEGART 247
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 NDGART 7
N+GART
Sbjct: 242 NEGART 247
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 ENDGARTH 8
E D RTH
Sbjct: 226 EGDSLRTH 233
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 ENDGARTH 8
E D RTH
Sbjct: 226 EGDSLRTH 233
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 ENDGARTH 8
E D RTH
Sbjct: 226 EGDSLRTH 233
>sp|J1L_HCMVA|UNCHARACTERIZED protein J1L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NDGARTHH 9
N +RTHH
Sbjct: 116 NTPSRTHH 123
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 ENDGARTH 8
E D RTH
Sbjct: 226 EGDSLRTH 233
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 ENDGARTH 8
E D RTH
Sbjct: 226 EGDSLRTH 233
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 NDGART 7
N+GART
Sbjct: 233 NEGART 238
49|SequenceR|250|241|CKYVRENDGA
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 CKYVRENDG 9
C Y E+DG
Sbjct: 762 CTYTLESDG 770
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CKYVREND 8
CK+V E+D
Sbjct: 4462 CKFVAEHD 4469
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 1 CKYVRENDG 9
C Y R N G
Sbjct: 157 CHYHRRNTG 165
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 1 CKYVRENDG 9
C Y R N G
Sbjct: 157 CHYHRRNTG 165
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 CKYVREND 8
CK +R ND
Sbjct: 424 CKVIRYND 431
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 3 YVREND 8
Y+RE+D
Sbjct: 320 YIREDD 325
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 3 YVREND 8
Y+RE+D
Sbjct: 320 YIREDD 325
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 3 YVREND 8
Y+RE+D
Sbjct: 338 YIREDD 343
>sp|SPIKE_ADE03|FIBER protein|Human adenovirus B serotype 3
Query: 3 YVREND 8
Y+RE+D
Sbjct: 314 YIREDD 319
>sp|PG095_VARV|ENTRY-FUSION complex associated protein OPG095|Variola virus
Query: 3 YVRENDG 9
Y+R+N G
Sbjct: 42 YIRQNHG 48
>sp|PG095_VAR67|ENTRY-FUSION complex associated protein OPG095|Variola virus (isolate
Query: 3 YVRENDG 9
Y+R+N G
Sbjct: 42 YIRQNHG 48
>sp|PG095_VACCC|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain
Query: 3 YVRENDG 9
Y+R+N G
Sbjct: 42 YIRQNHG 48
>sp|PG095_VACCA|ENTRY-FUSION complex associated protein OPG095|Vaccinia virus (strain Ankara)
Query: 3 YVRENDG 9
Y+R+N G
Sbjct: 42 YIRQNHG 48
>sp|PG095_MONPV|ENTRY-FUSION complex associated protein OPG095|Monkeypox virus (MPXV)
Query: 3 YVRENDG 9
Y+R+N G
Sbjct: 42 YIRQNHG 48
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 KYVREND 8
KY++EN+
Sbjct: 135 KYLKENE 141
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KYVREND 8
KY++EN+
Sbjct: 135 KYLKENE 141
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KYVREND 8
KY++EN+
Sbjct: 135 KYLKENE 141
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 2 KYVREND 8
KY++EN+
Sbjct: 135 KYLKENE 141
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 CKYVREND 8
CK++ ND
Sbjct: 818 CKHIDAND 825
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 2 KYVRENDG 9
KY +NDG
Sbjct: 5 KYCFDNDG 12
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 KYVREN 7
KYVR N
Sbjct: 207 KYVRNN 212
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 KYVREN 7
KYVR N
Sbjct: 207 KYVRNN 212
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KYVRENDG 9
KY +NDG
Sbjct: 5 KYCFDNDG 12
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KYVRENDG 9
KY +NDG
Sbjct: 5 KYCFDNDG 12
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KYVRENDG 9
+YV N+G
Sbjct: 55 RYVHRNEG 62
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KYVRENDG 9
+YV N+G
Sbjct: 55 RYVHRNEG 62
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 KYVREN 7
KYVR N
Sbjct: 212 KYVRNN 217
>sp|SCP_HHV6Z|SMALL capsomere-interacting protein|Human herpesvirus 6B (strain Z29)
Query: 2 KYVRENDG 9
KY ++N G
Sbjct: 55 KYAKQNGG 62
>sp|SCP_HHV6U|SMALL capsomere-interacting protein|Human herpesvirus 6A (strain
Query: 2 KYVRENDG 9
KY ++N G
Sbjct: 54 KYAKQNGG 61
>sp|SCP_HHV6H|SMALL capsomere-interacting protein|Human herpesvirus 6B (HHV-6 variant
Query: 2 KYVRENDG 9
KY ++N G
Sbjct: 55 KYAKQNGG 62
50|SequenceR|255|246|YTCIICKYVR
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 YTCIICKYV 9
YTCI C V
Sbjct: 133 YTCIFCDAV 141
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YTCIIC 6
YTCI+C
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YTCIIC 6
YTCI+C
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YTCIIC 6
YTCI+C
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YTCIIC 6
YTCI+C
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YTCIIC 6
YTCI+C
Sbjct: 223 YTCIVC 228
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 YTCIIC 6
YTCI+C
Sbjct: 223 YTCIVC 228
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 CIICKYVR 10
C+IC Y +
Sbjct: 497 CVICPYTK 504
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
Query: 1 YTCIIC 6
+TC+ C
Sbjct: 928 WTCVAC 933
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 CIICKYVR 10
C +C+Y R
Sbjct: 1037 CELCRYTR 1044
>sp|KITH_YMTV5|THYMIDINE kinase|Yaba monkey tumor virus (strain
Query: 1 YTCIICKYVR 10
YTC++ KY +
Sbjct: 35 YTCLVIKYSK 44
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 TCIICKYV 9
TCI+CK +
Sbjct: 704 TCILCKAI 711
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 TCIICK 7
TC+IC+
Sbjct: 1176 TCVICE 1181
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 TCIICK 7
TC+IC+
Sbjct: 1176 TCVICE 1181
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 TCIICK 7
TC+IC+
Sbjct: 1176 TCVICE 1181
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 YTCIIC 6
Y+C++C
Sbjct: 219 YSCMVC 224
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 YTCIIC 6
Y+C++C
Sbjct: 223 YSCMVC 228
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 YTCIIC 6
Y+C++C
Sbjct: 221 YSCMVC 226
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 501 ICEYIR 506
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 5 ICKYVR 10
IC+Y+R
Sbjct: 509 ICEYIR 514
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 YTCIICKYV 9
Y C +C+ V
Sbjct: 138 YNCKMCRTV 146
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 1 YTCIIC 6
+TC++C
Sbjct: 254 HTCLLC 259
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 YTCIICKYV 9
+ C +C+Y+
Sbjct: 193 FLCYLCRYL 201
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 YTCIICKYV 9
+TCI C +
Sbjct: 719 WTCISCAQI 727
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 1 YTCIICK 7
YTC C+
Sbjct: 21 YTCPFCR 27
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 1 YTCIICK 7
YTC C+
Sbjct: 21 YTCPFCR 27
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 1 YTCIICK 7
YTC C+
Sbjct: 21 YTCPFCR 27
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 1 YTCIICK 7
YTC C+
Sbjct: 21 YTCPFCR 27
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 YTCIICKYV 9
+TCI C +
Sbjct: 719 WTCISCAQI 727
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 YTCIICKYV 9
+TCI C +
Sbjct: 719 WTCISCAQI 727
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 YTCIICKYV 9
+TCI C +
Sbjct: 719 WTCISCAQI 727
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 YTCIICKYV 9
+TCI C +
Sbjct: 719 WTCISCAQI 727
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 YTCIICKY 8
Y C+ C Y
Sbjct: 72 YDCLDCAY 79
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YTCIICKYV 9
+ CI C YV
Sbjct: 143 WKCISCVYV 151
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 YTCIICKY 8
Y CI+C +
Sbjct: 3752 YGCILCVF 3759
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 TCIIC 6
TC++C
Sbjct: 447 TCLLC 451
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TCIIC 6
TC++C
Sbjct: 451 TCLLC 455
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TCIIC 6
TC++C
Sbjct: 453 TCLLC 457
51|SequenceR|260|251|ESVTTYTCII
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ESVTTYTCII 10
E+ TYTC++
Sbjct: 133 ETAGTYTCVL 142
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ESVTTYTCII 10
E+ TYTC++
Sbjct: 133 ETAGTYTCVL 142
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 ESVTTYTCI 9
ES T YTCI
Sbjct: 1089 ESPTEYTCI 1097
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 TTYTCII 10
T YTCI+
Sbjct: 221 TNYTCIV 227
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 2 SVTTYTCI 9
SVTTY CI
Sbjct: 202 SVTTYLCI 209
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 TTYTCII 10
T YTCI+
Sbjct: 221 TNYTCIV 227
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 TTYTCII 10
T YTCI+
Sbjct: 221 TNYTCIV 227
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 TTYTCII 10
T YTCI+
Sbjct: 221 TNYTCIV 227
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 TTYTCII 10
T YTCI+
Sbjct: 221 TNYTCIV 227
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 4 TTYTCII 10
T YTCI+
Sbjct: 221 TNYTCIV 227
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ESVTTYTCII 10
ES T Y C++
Sbjct: 1506 ESCTIYMCVV 1515
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ESVTTYTCII 10
ES T Y C++
Sbjct: 1506 ESCTIYMCVV 1515
>sp|IL1BP_CWPXB|INTERLEUKIN-1-BINDING protein|Cowpox virus (strain Brighton Red)
Query: 1 ESVTTYTCI 9
E TT+TC+
Sbjct: 302 EDATTFTCM 310
>sp|IL1BP_VACCA|INTERLEUKIN-1-BINDING protein|Vaccinia virus (strain Ankara) (VACV)
Query: 1 ESVTTYTCI 9
E TT+TC+
Sbjct: 302 EDATTFTCM 310
>sp|BEL1_FOAMV|PROTEIN Bel-1|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 VTTYTCI 9
+ +YTCI
Sbjct: 130 IVSYTCI 136
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 2 SVTTYTCI 9
+VTTY CI
Sbjct: 202 TVTTYLCI 209
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 ESVTTYTCI 9
E TY+C+
Sbjct: 157 EDSITYSCV 165
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ESVTTYTCII 10
ESV Y C +
Sbjct: 709 ESVGQYVCAL 718
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ESVTTYTCII 10
ESV Y C +
Sbjct: 709 ESVGQYVCAL 718
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ESVTTYTCII 10
ESV Y C +
Sbjct: 709 ESVGQYVCAL 718
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 ESVTTYTCII 10
+ V YTC++
Sbjct: 598 QQVRIYTCLL 607
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 ESVTTYTCII 10
+ V YTC++
Sbjct: 598 QQVRIYTCLL 607
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 SVTTYTC 8
+VTTY C
Sbjct: 34 TVTTYVC 40
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 ESVTTYTCII 10
E+ +TY C I
Sbjct: 455 ETTSTYVCAI 464
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 ESVTTYTCII 10
E+ +TY C I
Sbjct: 455 ETTSTYVCAI 464
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 ESVTTYTCII 10
E+ +TY C I
Sbjct: 457 ETTSTYVCAI 466
52|SequenceR|265|256|KRWHYESVTT
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 RWHYES 7
R+HYE+
Sbjct: 270 RYHYEA 275
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 3 WHYESVT 9
WH +SVT
Sbjct: 351 WHRDSVT 357
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 3 WHYESVT 9
WH +SVT
Sbjct: 351 WHRDSVT 357
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KRWHYES 7
K WHY S
Sbjct: 3863 KLWHYCS 3869
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KRWHYES 7
K WHY S
Sbjct: 3863 KLWHYCS 3869
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 KRWHYES 7
K+W Y S
Sbjct: 558 KKWQYNS 564
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 KRWHYESVTT 10
K+W Y S T
Sbjct: 557 KKWQYNSPLT 566
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 KRWHYESVTT 10
K+W Y S T
Sbjct: 557 KKWQYNSPLT 566
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 KRWHYESVTT 10
K+W Y S T
Sbjct: 557 KKWQYNSPLT 566
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 KRWHYES 7
K+W Y S
Sbjct: 558 KKWQYNS 564
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 HYESV 8
HYESV
Sbjct: 2509 HYESV 2513
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 WHYESV 8
W YES+
Sbjct: 730 WRYESM 735
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 WHYESV 8
W YES+
Sbjct: 730 WRYESM 735
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 KRWHYES 7
K+W Y S
Sbjct: 558 KKWQYNS 564
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 4 HYESV 8
HYES+
Sbjct: 417 HYESI 421
53|SequenceR|270|261|HNRLHKRWHY
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 HKRWHY 10
HK+W Y
Sbjct: 556 HKKWQY 561
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 HKRWHY 10
HK+W Y
Sbjct: 557 HKKWQY 562
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 HKRWHY 10
HK+W Y
Sbjct: 556 HKKWQY 561
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 HKRWHY 10
HK+W Y
Sbjct: 556 HKKWQY 561
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 HKRWHY 10
HK+W Y
Sbjct: 557 HKKWQY 562
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 5 HKRWHY 10
HKR HY
Sbjct: 460 HKRLHY 465
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 HNRLHKRWHY 10
HN ++ W+Y
Sbjct: 2822 HNNPYRTWNY 2831
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 5 HKRWHY 10
HK+W Y
Sbjct: 557 HKKWQY 562
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HNRLHKRW 8
H+R H W
Sbjct: 1169 HDRYHSNW 1176
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 HNRLHKRWH 9
HN++ WH
Sbjct: 1047 HNQIKGPWH 1055
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 HKRWHY 10
HK W Y
Sbjct: 557 HKNWQY 562
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 HNRLH 5
HNRLH
Sbjct: 332 HNRLH 336
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HNRLHKRW 8
H R H W
Sbjct: 1157 HERYHNNW 1164
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 3 RLHKRWHY 10
+LHK W++
Sbjct: 20 QLHKPWNF 27
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HNRLHKRW 8
H R H W
Sbjct: 1159 HERYHNNW 1166
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HNRLHKRW 8
H R H W
Sbjct: 1159 HERYHSNW 1166
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 HNRLHKRW 8
H R H W
Sbjct: 1169 HERYHSNW 1176
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 2 NRLHKRW 8
N LHK W
Sbjct: 60 NPLHKNW 66
Query: 1 HNRLHK 6
HN++HK
Sbjct: 628 HNKIHK 633
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 HKRWHY 10
HK+W +
Sbjct: 565 HKKWQF 570
>sp|MCEL_VARV|MRNA-CAPPING enzyme catalytic subunit|Variola virus
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 NRLHK 6
NRLHK
Sbjct: 113 NRLHK 117
>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 2 NRLHKR 7
NRL+KR
Sbjct: 40 NRLYKR 45
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 2 NRLHKRW 8
N LHK W
Sbjct: 60 NPLHKNW 66
Query: 1 HNRLHK 6
HN++HK
Sbjct: 637 HNKIHK 642
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 5 HKRWHY 10
HK+W +
Sbjct: 565 HKKWQF 570
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 LHKRW 8
LHK W
Sbjct: 1181 LHKEW 1185
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 2 NRLHKRW 8
N LHK W
Sbjct: 60 NPLHKNW 66
Query: 1 HNRLHK 6
HN++HK
Sbjct: 638 HNKIHK 643
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 2 NRLHKRW 8
NRL K W
Sbjct: 446 NRLKKDW 452
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1540 LHTMWH 1545
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1540 LHTMWH 1545
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 HNRLHK 6
+NR+HK
Sbjct: 157 YNRMHK 162
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1538 LHTMWH 1543
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 LHKRWH 9
LH WH
Sbjct: 1549 LHTLWH 1554
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 4 LHKRW 8
LHK W
Sbjct: 223 LHKSW 227
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 LHKRWHY 10
LH+ W Y
Sbjct: 2121 LHQLWPY 2127
54|SequenceR|275|266|VKRPFHNRLH
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 KRPFHNRLH 10
K+P H+ LH
Sbjct: 1007 KQPLHDELH 1015
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 RPFHN 7
RPFHN
Sbjct: 339 RPFHN 343
Query: 4 PFHN 7
PFHN
Sbjct: 189 PFHN 192
>sp|PAP_HHV8P|DNA polymerase processivity factor|Human herpesvirus 8 type P
Query: 4 PFHNRL 9
PFH+R+
Sbjct: 152 PFHDRM 157
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 6 HNRLH 10
HNRLH
Sbjct: 332 HNRLH 336
>sp|KITH_MONPZ|THYMIDINE kinase|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 KRPFHNRLH 10
+RPF+N L+
Sbjct: 115 RRPFNNILN 123
>sp|KITH_MONPV|THYMIDINE kinase|Monkeypox virus (MPXV)
Query: 2 KRPFHNRLH 10
+RPF+N L+
Sbjct: 115 RRPFNNILN 123
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 2 KRPFH 6
+RPFH
Sbjct: 137 RRPFH 141
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 1 VKRPFHN 7
VKR FHN
Sbjct: 875 VKRMFHN 881
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 VKRPFHN 7
VK+ FHN
Sbjct: 936 VKKTFHN 942
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 3 RPFHNRL 9
RPF NRL
Sbjct: 360 RPFINRL 366
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 3 RPFHNRL 9
RPF NRL
Sbjct: 360 RPFINRL 366
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 4 PFHN 7
PFHN
Sbjct: 304 PFHN 307
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 4 PFHN 7
PFHN
Sbjct: 304 PFHN 307
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 4 PFHN 7
PFHN
Sbjct: 304 PFHN 307
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 4 PFHN 7
PFHN
Sbjct: 304 PFHN 307
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 298 PFHN 301
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VKRPFHNRLH 10
VK+P LH
Sbjct: 154 VKKPITQELH 163
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VKRPFHNRLH 10
VK+P LH
Sbjct: 154 VKKPITQELH 163
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 4 PFHN 7
PFHN
Sbjct: 295 PFHN 298
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 4 PFHN 7
PFHN
Sbjct: 304 PFHN 307
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 295 PFHN 298
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VKRPFHNRLH 10
VK+P LH
Sbjct: 154 VKKPITQELH 163
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 4 PFHN 7
PFHN
Sbjct: 304 PFHN 307
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 4 PFHNRL 9
P++NRL
Sbjct: 136 PYYNRL 141
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 295 PFHN 298
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 295 PFHN 298
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 5 FHNRL 9
FHNR+
Sbjct: 1294 FHNRI 1298
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 VKRPFH 6
+K PFH
Sbjct: 1949 IKNPFH 1954
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 PFHN 7
PFHN
Sbjct: 306 PFHN 309
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 4 PFHN 7
PFHN
Sbjct: 302 PFHN 305
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 VKRPFH 6
+K PFH
Sbjct: 1949 IKNPFH 1954
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 1 VKRPFHNRLH 10
+KRP + LH
Sbjct: 103 LKRPLYITLH 112
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 VKRPFH 6
+K PFH
Sbjct: 1949 IKNPFH 1954
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 1 VKRPFHNRLH 10
+KRP + LH
Sbjct: 101 LKRPMYVTLH 110
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 1 VKRPFHNRLH 10
+KRP + LH
Sbjct: 103 LKRPLYITLH 112
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 1 VKRPFHNRLH 10
+KRP + LH
Sbjct: 103 LKRPLYITLH 112
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 4 PFHNRL 9
PF+N+L
Sbjct: 148 PFYNKL 153
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 1 VKRPFHNRLH 10
+KRP + LH
Sbjct: 103 LKRPLYITLH 112
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 1 VKRPFHNRLH 10
+KRP + LH
Sbjct: 103 LKRPLYITLH 112
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 4 PFHNRL 9
PF+N+L
Sbjct: 182 PFYNKL 187
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 2 KRPFHNRLH 10
KRP + LH
Sbjct: 104 KRPLYITLH 112
55|SequenceR|280|271|KGCTYVKRPF
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 KGCTYVK 7
+GCTY+K
Sbjct: 1074 QGCTYLK 1080
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 KGCTYV 6
KGC+Y+
Sbjct: 405 KGCSYI 410
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 3 CTYVKRPF 10
C Y KRP
Sbjct: 29 CVYCKRPL 36
>sp|VE2_HPV60|REGULATORY protein E2|Human papillomavirus type 60
Query: 1 KGCTY 5
+GCTY
Sbjct: 392 RGCTY 396
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 1 KGCTYV 6
+GCT+V
Sbjct: 266 RGCTFV 271
>sp|VE6_HPV39|PROTEIN E6|Human papillomavirus 39
Query: 2 GCTYVKRPF 10
C Y +RP
Sbjct: 31 ACVYCRRPL 39
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CTYVK 7
CTY+K
Sbjct: 225 CTYIK 229
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 1948 YIKNPF 1953
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 1948 YIKNPF 1953
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 1948 YIKNPF 1953
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 KGCTYVKRP 9
K CT KRP
Sbjct: 58 KICTQGKRP 66
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 CTYVK 7
CTY+K
Sbjct: 225 CTYIK 229
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 KGCTYV 6
+GCT+V
Sbjct: 262 RGCTFV 267
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GCTYVK 7
GC YVK
Sbjct: 5124 GCYYVK 5129
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 GCTYVK 7
GC YVK
Sbjct: 5094 GCYYVK 5099
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GCTYVK 7
GC YVK
Sbjct: 5074 GCYYVK 5079
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GCTYVK 7
GC YVK
Sbjct: 5036 GCYYVK 5041
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 2 GCTYVK 7
GCTY K
Sbjct: 214 GCTYCK 219
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 157 YIKTPF 162
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 157 YIKTPF 162
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 157 YIKTPF 162
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 157 YIKTPF 162
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 157 YIKTPF 162
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 5 YVKRPF 10
Y+K PF
Sbjct: 157 YIKTPF 162
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 TYVKRP 9
TY+K P
Sbjct: 433 TYIKEP 438
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GCTYVKRP 9
G YVK P
Sbjct: 2191 GINYVKSP 2198
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 GCTY 5
GCTY
Sbjct: 761 GCTY 764
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 GCTYVK 7
GCT+V+
Sbjct: 834 GCTHVE 839
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GCTYVKRP 9
G YVK P
Sbjct: 2191 GINYVKSP 2198
56|SequenceR|285|276|SFYNCKGCTY
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 SFYNCKGCTY 10
+++ C GC Y
Sbjct: 25 AYFVCGGCVY 34
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 SFYNCKGCTY 10
+++ C GC Y
Sbjct: 25 AYFVCGGCVY 34
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 3 YNCKGC 8
YNCK C
Sbjct: 138 YNCKMC 143
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 SFYNCK 6
SFY+CK
Sbjct: 375 SFYDCK 380
>sp|E1A_ADE12|EARLY E1A protein|Human adenovirus A serotype 12
Query: 3 YNCKGCTY 10
+NCK C +
Sbjct: 157 HNCKSCEH 164
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 FYNCKGCT 9
FY GCT
Sbjct: 158 FYTVHGCT 165
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGSDGCWY 1109
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CKGC 8
CKGC
Sbjct: 1299 CKGC 1302
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 CKGC 8
CKGC
Sbjct: 1299 CKGC 1302
>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 5 CKGCTY 10
CK C Y
Sbjct: 171 CKNCKY 176
>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate
Query: 5 CKGCTY 10
CK C Y
Sbjct: 171 CKNCKY 176
>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United
Query: 5 CKGCTY 10
CK C Y
Sbjct: 185 CKNCPY 190
>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 5 CKGCTY 10
CK C Y
Sbjct: 171 CKNCKY 176
>sp|PG159_MONPV|PROTEIN OPG159|Monkeypox virus (MPXV)
Query: 1 SFYNC 5
SFYNC
Sbjct: 15 SFYNC 19
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YNCKGCTY 10
Y+C C Y
Sbjct: 72 YDCLDCAY 79
>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 5 CKGCTY 10
CK C Y
Sbjct: 171 CKNCKY 176
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 CKGCT 9
C GCT
Sbjct: 973 CAGCT 977
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 5 CKGCT 9
C GCT
Sbjct: 973 CAGCT 977
>sp|PG159_VARV|PROTEIN OPG159|Variola virus
Query: 1 SFYNC 5
SFYNC
Sbjct: 15 SFYNC 19
>sp|PG159_VAR67|PROTEIN OPG159|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SFYNC 5
SFYNC
Sbjct: 15 SFYNC 19
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1093 SFWGPDGCWY 1102
>sp|PG159_VACCC|PROTEIN OPG159|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SFYNC 5
SFYNC
Sbjct: 15 SFYNC 19
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 3 YNCKGC 8
Y+CK C
Sbjct: 135 YHCKMC 140
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 SFYNCKGCTY 10
SF+ GC Y
Sbjct: 1100 SFHGNDGCWY 1109
>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)
Query: 2 FYNCKGCT 9
YNC CT
Sbjct: 68 LYNCTDCT 75
>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FYNCKGCT 9
YNC CT
Sbjct: 68 LYNCTDCT 75
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 CKGCT 9
CK CT
Sbjct: 1100 CKNCT 1104
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 CKGCT 9
CK CT
Sbjct: 1100 CKNCT 1104
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 FYNCKGCT 9
F N GCT
Sbjct: 763 FLNKDGCT 770
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 3 YNCK 6
YNCK
Sbjct: 252 YNCK 255
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YNCK 6
YNCK
Sbjct: 252 YNCK 255
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 YNCK 6
YNCK
Sbjct: 1625 YNCK 1628
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 YNCK 6
YNCK
Sbjct: 1625 YNCK 1628
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 3 YNCKGCTY 10
+ C+ C Y
Sbjct: 152 HGCRSCHY 159
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 3 YNCKGCTY 10
+ C+ C Y
Sbjct: 152 HGCRSCHY 159
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|NSP1_ROTHM|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 5 CKGCT 9
C+GCT
Sbjct: 54 CRGCT 58
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 3 YNCKGCTY 10
+ CK C +
Sbjct: 161 HGCKSCEF 168
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 3 YNCKGCTY 10
+ CK C +
Sbjct: 156 HGCKSCEF 163
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 5 CKGCTY 10
CK C Y
Sbjct: 412 CKNCRY 417
57|SequenceR|290|281|NNKRDSFYNC
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 NNKRDSFYN 9
NN +DS YN
Sbjct: 386 NNTQDSVYN 394
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 KRDSFY 8
K+DSFY
Sbjct: 562 KQDSFY 567
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 NKRDSFYNC 10
N+R S NC
Sbjct: 1440 NRRSSIGNC 1448
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 NKRDSFYNC 10
N+R S NC
Sbjct: 1440 NRRSSIGNC 1448
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 NNKRDSFYNC 10
N K +S NC
Sbjct: 400 NQKAESLANC 409
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 RDSFYNC 10
RD+ Y C
Sbjct: 856 RDAIYKC 862
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 RDSFYNC 10
RD FYN
Sbjct: 79 RDHFYNL 85
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 4 RDSFYNC 10
RD FYN
Sbjct: 79 RDHFYNL 85
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 RDSFYNC 10
RD FYN
Sbjct: 79 RDHFYNL 85
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 4 RDSFYNC 10
RD FYN
Sbjct: 79 RDHFYNL 85
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 NNKRDSFYNC 10
N K S Y C
Sbjct: 1315 NQKLSSMYAC 1324
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 NNKRDSFYNC 10
N K S Y C
Sbjct: 1315 NQKLSSMYAC 1324
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 2 NKRDSF 7
N+RDSF
Sbjct: 65 NRRDSF 70
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NKRDSF 7
N+RDSF
Sbjct: 65 NRRDSF 70
>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NKRDSF 7
N+RDSF
Sbjct: 65 NRRDSF 70
58|SequenceR|295|286|VHQVYNNKRD
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 HQVYNNK 8
H VY NK
Sbjct: 2004 HHVYRNK 2010
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 HQVYNNK 8
H VY NK
Sbjct: 2004 HHVYRNK 2010
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 HQVYNNK 8
H VY NK
Sbjct: 2004 HHVYRNK 2010
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 HQVYNNK 8
H VY NK
Sbjct: 2004 HHVYRNK 2010
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 VHQVYNNKRD 10
V VYNNK D
Sbjct: 35 VVSVYNNKYD 44
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 1 VHQVYNNKRD 10
V VYNNK D
Sbjct: 35 VVSVYNNKYD 44
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 1 VHQVYNNKRD 10
V VYNNK D
Sbjct: 35 VVSVYNNKYD 44
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 QVYNNK 8
Q+YNNK
Sbjct: 224 QIYNNK 229
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 QVYNNK 8
Q+YNNK
Sbjct: 224 QIYNNK 229
>sp|NSP3_ROTH6|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 QVYNNK 8
Q+YNNK
Sbjct: 224 QIYNNK 229
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 HQVYNNK 8
H +Y NK
Sbjct: 2004 HHIYRNK 2010
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 QVYNN 7
QVYNN
Sbjct: 1781 QVYNN 1785
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 2 HQVYNNKR 9
HQ YN R
Sbjct: 35 HQTYNRGR 42
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 2 HQVYNNKR 9
HQ YN R
Sbjct: 35 HQTYNRGR 42
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VHQVYN 6
VH VYN
Sbjct: 19 VHYVYN 24
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 HQVYNNKRD 10
H V +KRD
Sbjct: 407 HDVQESKRD 415
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 HQVYNNKRD 10
H V +KRD
Sbjct: 407 HDVQESKRD 415
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 HQVYNNKRD 10
H V +KRD
Sbjct: 73 HDVQESKRD 81
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VHQVYNNK 8
+ ++YNNK
Sbjct: 346 LRKIYNNK 353
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HQVYN 6
H+VYN
Sbjct: 984 HEVYN 988
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HQVYN 6
H+VYN
Sbjct: 984 HEVYN 988
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 HQVYNNKR 9
H+VYN+ +
Sbjct: 988 HEVYNSSQ 995
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HQVYN 6
H+VYN
Sbjct: 982 HEVYN 986
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 HQVYN 6
H+VYN
Sbjct: 981 HEVYN 985
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 HQVYN 6
H+VYN
Sbjct: 984 HEVYN 988
>sp|NSP3_ROTH3|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 3 QVYNNK 8
Q+YNNK
Sbjct: 224 QMYNNK 229
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 VYNNKRD 10
+Y+ KRD
Sbjct: 247 IYHEKRD 253
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 VYNNKRD 10
+Y+ KRD
Sbjct: 247 IYHEKRD 253
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 VYNNKRD 10
+Y+ KRD
Sbjct: 247 IYHEKRD 253
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 VHQVYNN 7
VH+++N+
Sbjct: 23 VHEIFNS 29
59|SequenceR|300|291|GTHTRVHQVY
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 4 TRVHQVY 10
TR+HQ++
Sbjct: 215 TRIHQLF 221
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 4 TRVHQVY 10
TR+HQ++
Sbjct: 215 TRIHQLF 221
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 GTHTRVH 7
TH RVH
Sbjct: 323 ATHKRVH 329
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 GTHTRVH 7
TH RVH
Sbjct: 323 ATHKRVH 329
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 GTHTRVH 7
TH RVH
Sbjct: 323 ATHKRVH 329
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 THTRVHQ 8
+HTR H+
Sbjct: 1821 SHTRTHE 1827
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 3 HTRVHQV 9
+TR+H+V
Sbjct: 383 YTRIHEV 389
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 THTRVHQ 8
TH R H+
Sbjct: 1455 THVRAHE 1461
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 THTRVHQ 8
TH R H+
Sbjct: 1455 THVRAHE 1461
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 1 GTHTRVHQ 8
G HTRV +
Sbjct: 161 GPHTRVKR 168
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 1 GTHTRVHQ 8
G HTRV +
Sbjct: 161 GPHTRVKR 168
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 GTHTRVH 7
TH R+H
Sbjct: 330 ATHNRLH 336
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTRVHQVY 10
HT+ Q+Y
Sbjct: 494 HTKKRQIY 501
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 TRVHQV 9
TRVH++
Sbjct: 95 TRVHEI 100
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 TRVHQV 9
TRVH++
Sbjct: 95 TRVHEI 100
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 TRVHQV 9
TRVH++
Sbjct: 95 TRVHEI 100
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 TRVHQV 9
TRVH++
Sbjct: 95 TRVHEI 100
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTRVHQVY 10
HT+ Q+Y
Sbjct: 494 HTKKRQIY 501
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTRVHQVY 10
HT+ Q+Y
Sbjct: 494 HTKKRQIY 501
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTRVHQVY 10
HT+ Q+Y
Sbjct: 494 HTKKRQIY 501
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 HTRVHQVY 10
HT+ Q+Y
Sbjct: 494 HTKKRQIY 501
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 HTRVHQVY 10
HTR ++Y
Sbjct: 494 HTRKRKIY 501
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 3 HTRVH 7
HTR+H
Sbjct: 534 HTRMH 538
60|SequenceR|305|296|KYPREGTHTR
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 PREGTHTR 10
PR+G H R
Sbjct: 1361 PRKGKHER 1368
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 PREGTHTR 10
PR+G H R
Sbjct: 1361 PRKGKHER 1368
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 4 REGTHT 9
+EGTHT
Sbjct: 9 KEGTHT 14
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 4 REGTH 8
REGTH
Sbjct: 9 REGTH 13
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 4 REGTH 8
REGTH
Sbjct: 9 REGTH 13
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain
Query: 4 REGTH 8
REGTH
Sbjct: 9 REGTH 13
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 REGTH 8
REGTH
Sbjct: 9 REGTH 13
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 4 REGTH 8
REGTH
Sbjct: 9 REGTH 13
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 YPREGTH 8
YP EGT+
Sbjct: 345 YPEEGTN 351
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 YPREGTH 8
YP EGT+
Sbjct: 345 YPEEGTN 351
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 YPREGTH 8
YP EGT+
Sbjct: 345 YPEEGTN 351
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 5 EGTHT 9
EGTHT
Sbjct: 958 EGTHT 962
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 REGTHT 9
REG+HT
Sbjct: 299 REGSHT 304
>sp|UNG_VACCC|URACIL-DNA glycosylase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YPREGT 7
YP++GT
Sbjct: 70 YPKDGT 75
>sp|UNG_VACCA|URACIL-DNA glycosylase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YPREGT 7
YP++GT
Sbjct: 70 YPKDGT 75
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 REGTHT 9
REG+HT
Sbjct: 299 REGSHT 304
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 4 REGTHT 9
REG+HT
Sbjct: 304 REGSHT 309
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 4 REGTHT 9
REG+HT
Sbjct: 304 REGSHT 309
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 4 REGTHT 9
REG+HT
Sbjct: 303 REGSHT 308
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 4 REGTHT 9
REG+HT
Sbjct: 304 REGSHT 309
>sp|UNG_MONPV|URACIL-DNA glycosylase|Monkeypox virus (MPXV)
Query: 2 YPREGT 7
YP++GT
Sbjct: 70 YPKDGT 75
>sp|UNG_VARV|URACIL-DNA glycosylase|Variola virus
Query: 2 YPREGT 7
YP++GT
Sbjct: 70 YPKDGT 75
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 4 REGTH 8
REGTH
Sbjct: 236 REGTH 240
>sp|UNG_VAR67|URACIL-DNA glycosylase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 YPREGT 7
YP++GT
Sbjct: 70 YPKDGT 75
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 YPREGTHT 9
Y RE HT
Sbjct: 533 YTREWNHT 540
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 3 PREGTHTR 10
PR G H R
Sbjct: 17 PRIGPHVR 24
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 YPREGTHT 9
Y RE TH+
Sbjct: 158 YKRESTHS 165
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 YPREGTHT 9
Y RE TH+
Sbjct: 158 YKRESTHS 165
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 PREGTHT 9
P+E THT
Sbjct: 270 PQEATHT 276
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 KYPREGT 7
KYP GT
Sbjct: 411 KYPSAGT 417
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 3 PREGTHT 9
P+E THT
Sbjct: 270 PQEATHT 276
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 YPREGTHT 9
Y RE TH+
Sbjct: 158 YKRESTHS 165
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 YPREGTHT 9
Y RE TH+
Sbjct: 158 YKRESTHS 165
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 YPREGTHT 9
Y RE TH+
Sbjct: 158 YKRESTHS 165
61|SequenceR|310|301|PCLECKYPRE
>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 2 CLECKYPRE 10
C CKY R+
Sbjct: 171 CKNCKYKRK 179
>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 2 CLECKYPRE 10
C CKY R+
Sbjct: 171 CKNCKYKRK 179
>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 2 CLECKYPRE 10
C CKY R+
Sbjct: 171 CKNCKYKRK 179
>sp|NSP5_ROT41|NON-STRUCTURAL protein 5|Rotavirus A (isolate
Query: 2 CLECKYPRE 10
C CKY R+
Sbjct: 171 CKNCKYKRK 179
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 PCLECKYPRE 10
PC+ C Y +E
Sbjct: 282 PCIPCCYEKE 291
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 CLECKY 7
CL+CK+
Sbjct: 273 CLDCKW 278
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 CLECKY 7
CL+CK+
Sbjct: 259 CLDCKW 264
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 3 LECKYPRE 10
L+C+ PR+
Sbjct: 216 LQCRAPRD 223
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 3 LECKYPRE 10
L+C+ PR+
Sbjct: 216 LQCRAPRD 223
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 ECKYPR 9
E KYPR
Sbjct: 331 ELKYPR 336
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 3 LECKYPRE 10
L+C+ PR+
Sbjct: 216 LQCRAPRD 223
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 3 LECKYPRE 10
L+C+ PR+
Sbjct: 216 LQCRAPRD 223
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 4 ECKYPR 9
E KYPR
Sbjct: 331 ELKYPR 336
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 ECKYPR 9
E KYPR
Sbjct: 331 ELKYPR 336
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 PCLECKYPR 9
P + CKY +
Sbjct: 383 PIIHCKYSK 391
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 CKYPR 9
CKYPR
Sbjct: 135 CKYPR 139
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 4 ECKYPR 9
E KYPR
Sbjct: 331 ELKYPR 336
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 PCLEC 5
PCLEC
Sbjct: 181 PCLEC 185
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 5 CKYPR 9
CKYPR
Sbjct: 135 CKYPR 139
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PCLECKYPRE 10
PC C Y +E
Sbjct: 282 PCTPCCYEKE 291
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 5 CKYPRE 10
C YP E
Sbjct: 327 CAYPEE 332
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CKYPRE 10
C YP E
Sbjct: 327 CAYPEE 332
>sp|VE7_HPV56|PROTEIN E7|Human papillomavirus 56
Query: 1 PCLECKY 7
PC ECK+
Sbjct: 64 PCCECKF 70
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 LECKYPRE 10
L+C+ PR+
Sbjct: 217 LQCRAPRD 224
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 PCLECKYPRE 10
PC C Y +E
Sbjct: 282 PCAPCCYEKE 291
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 LECKYPRE 10
L+C+ PR+
Sbjct: 217 LQCRAPRD 224
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PCLEC 5
PC EC
Sbjct: 1149 PCPEC 1153
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 5 CKYP 8
CKYP
Sbjct: 238 CKYP 241
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 5 CKYP 8
CKYP
Sbjct: 230 CKYP 233
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 PCLECKY 7
PC C+Y
Sbjct: 4353 PCNVCQY 4359
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PCLEC 5
PC EC
Sbjct: 1149 PCPEC 1153
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 5 CKYP 8
CKYP
Sbjct: 227 CKYP 230
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 5 CKYP 8
CKYP
Sbjct: 256 CKYP 259
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 5 CKYP 8
CKYP
Sbjct: 233 CKYP 236
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 5 CKYP 8
CKYP
Sbjct: 228 CKYP 231
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 5 CKYP 8
CKYP
Sbjct: 258 CKYP 261
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 CLECKY 7
C EC Y
Sbjct: 920 CTECTY 925
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 5 CKYP 8
CKYP
Sbjct: 230 CKYP 233
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 5 CKYP 8
CKYP
Sbjct: 230 CKYP 233
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 5 CKYP 8
CKYP
Sbjct: 230 CKYP 233
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PCLECKY 7
PC C+Y
Sbjct: 4353 PCNVCQY 4359
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 5 CKYP 8
CKYP
Sbjct: 230 CKYP 233
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PCLECKYPR 9
PC+ C Y +
Sbjct: 281 PCMPCCYEK 289
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 5 CKYP 8
CKYP
Sbjct: 230 CKYP 233
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PCLECKYPR 9
PC+ C Y +
Sbjct: 281 PCMPCCYEK 289
>sp|PG052_VACCC|PROTEIN OPG052|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLECKYPR 9
CL+ YPR
Sbjct: 49 CLKNDYPR 56
>sp|PG052_MONPV|PROTEIN OPG053|Monkeypox virus (MPXV)
Query: 2 CLECKYPR 9
CL+ YPR
Sbjct: 48 CLKNDYPR 55
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 2 CLECKYP 8
C+ECK P
Sbjct: 30 CVECKKP 36
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 PCLECKYPRE 10
PC C+Y +
Sbjct: 52 PCPFCQYDEQ 61
>sp|PG052_VAR67|PROTEIN OPG052|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CLECKYPR 9
CL+ YPR
Sbjct: 49 CLKNDYPR 56
>sp|PG052_VACCP|PROTEIN OPG052|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 CLECKYPR 9
CL+ YPR
Sbjct: 49 CLKNDYPR 56
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PCLECKYPR 9
P KYPR
Sbjct: 1965 PTYASKYPR 1973
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PCLECKYPR 9
PC+ C Y +
Sbjct: 281 PCMPCCYEK 289
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PCLECKYPR 9
PC+ C Y +
Sbjct: 280 PCMPCCYEK 288
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 5 CKYP 8
CKYP
Sbjct: 228 CKYP 231
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 PCLECKYPR 9
P KYPR
Sbjct: 1952 PTYTSKYPR 1960
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 PCLECKYPR 9
P KYPR
Sbjct: 1952 PTYTSKYPR 1960
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PCLECKYPR 9
PC+ C Y +
Sbjct: 279 PCMPCCYEK 287
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 5 CKYP 8
CKYP
Sbjct: 228 CKYP 231
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 PCLECKYPR 9
PC YPR
Sbjct: 151 PCRSIVYPR 159
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 5 CKYP 8
CKYP
Sbjct: 231 CKYP 234
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 5 CKYP 8
CKYP
Sbjct: 229 CKYP 232
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 5 CKYP 8
CKYP
Sbjct: 228 CKYP 231
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 5 CKYP 8
CKYP
Sbjct: 256 CKYP 259
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 5 CKYP 8
CKYP
Sbjct: 242 CKYP 245
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 5 CKYP 8
CKYP
Sbjct: 241 CKYP 244
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 5 CKYP 8
CKYP
Sbjct: 231 CKYP 234
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 3 LECKY 7
L+CKY
Sbjct: 502 LDCKY 506
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 5 CKYP 8
CKYP
Sbjct: 263 CKYP 266
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 5 CKYP 8
CKYP
Sbjct: 231 CKYP 234
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 5 CKYP 8
CKYP
Sbjct: 226 CKYP 229
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 5 CKYP 8
CKYP
Sbjct: 236 CKYP 239
>sp|ORF0_VZVD|MEMBRANE protein 0|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CLECKY 7
CL+C Y
Sbjct: 74 CLDCAY 79
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 5 CKYP 8
CKYP
Sbjct: 231 CKYP 234
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 CKYPRE 10
CKYP E
Sbjct: 777 CKYPVE 782
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 5 CKYP 8
CKYP
Sbjct: 225 CKYP 228
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 LECKY 7
L+CKY
Sbjct: 502 LDCKY 506
62|SequenceR|315|306|QSSSYPCLEC
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 3 SSYPCLEC 10
S+ PCLEC
Sbjct: 178 SNLPCLEC 185
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 QSSSYPCLEC 10
++SS+PC C
Sbjct: 47 KNSSFPCPFC 56
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 YPCLEC 10
YP LEC
Sbjct: 1084 YPELEC 1089
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 YPCLEC 10
YP LEC
Sbjct: 1084 YPELEC 1089
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 SSYPC 7
+SYPC
Sbjct: 2 ASYPC 6
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 SSYPC 7
+SYPC
Sbjct: 2 ASYPC 6
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 SSYPC 7
+SYPC
Sbjct: 2 ASYPC 6
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 SSYPC 7
+SYPC
Sbjct: 2 ASYPC 6
>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41
Query: 1 QSSSYPCLE 9
Q +YPC++
Sbjct: 31 QQITYPCIQ 39
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QSSSYP 6
QSSSYP
Sbjct: 785 QSSSYP 790
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QSSSYP 6
QSSSYP
Sbjct: 802 QSSSYP 807
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 4 SYPCLEC 10
SY CL+C
Sbjct: 71 SYDCLDC 77
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 QSSSYPCLEC 10
+ SSY L C
Sbjct: 496 KDSSYDALRC 505
63|SequenceR|320|311|TLHTKQSSSY
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 LHTKQSSSY 10
L KQ+SSY
Sbjct: 631 LRCKQASSY 639
64|SequenceR|325|316|TRMHRTLHTK
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 HRTLHT 9
HRT HT
Sbjct: 20 HRTYHT 25
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 RMHRTLHT 9
R HRT+ T
Sbjct: 296 RRHRTVQT 303
65|SequenceR|330|321|KEGSHTRMHR
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 5 HTRMHR 10
HT MHR
Sbjct: 597 HTEMHR 602
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 5 HTRMH 9
HTRMH
Sbjct: 534 HTRMH 538
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 5 HTRMHR 10
HT MHR
Sbjct: 597 HTEMHR 602
>sp|MCES_YMTV5|MRNA-CAPPING enzyme small subunit|Yaba monkey tumor virus (strain
Query: 1 KEGSHT 6
KEG+HT
Sbjct: 9 KEGTHT 14
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 SHTRMH 9
SHTR H
Sbjct: 1821 SHTRTH 1826
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 3 GSHTRMHR 10
G HTR+ R
Sbjct: 161 GPHTRVKR 168
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain AD169)
Query: 3 GSHTRMHR 10
G HTR+ R
Sbjct: 161 GPHTRVKR 168
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 KEGSHT 6
+EGSHT
Sbjct: 299 REGSHT 304
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 KEGSHT 6
+EGSHT
Sbjct: 299 REGSHT 304
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 KEGSHT 6
+EGSHT
Sbjct: 304 REGSHT 309
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 KEGSHT 6
+EGSHT
Sbjct: 303 REGSHT 308
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 KEGSHT 6
+EGSHT
Sbjct: 304 REGSHT 309
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 KEGSHT 6
+EGSHT
Sbjct: 304 REGSHT 309
66|SequenceR|335|326|DCKFPKEGSH
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 KFPKEG 8
+FPKEG
Sbjct: 636 EFPKEG 641
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CKFPKE 7
C FP+E
Sbjct: 56 CTFPEE 61
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 4 FPKEGSH 10
FPK+G++
Sbjct: 214 FPKDGTN 220
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 4 FPKEGSH 10
FPK+G++
Sbjct: 214 FPKDGTN 220
>sp|UNG_HHV23|URACIL-DNA glycosylase|Human herpesvirus 2 (strain 333)
Query: 2 CKFPKEGSH 10
C + K G+H
Sbjct: 12 CAYSKNGTH 20
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 DCKFPK 6
+CK PK
Sbjct: 43 NCKLPK 48
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 DCKFPK 6
+CK PK
Sbjct: 43 NCKLPK 48
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DCKFPKE 7
DCK PK+
Sbjct: 1181 DCKPPKD 1187
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DCKFPKE 7
DCK PK+
Sbjct: 1181 DCKPPKD 1187
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DCKFPKE 7
DCK PK+
Sbjct: 1181 DCKPPKD 1187
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 KFPKEG 8
KFP EG
Sbjct: 524 KFPYEG 529
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 3 KFPKEG 8
KFP EG
Sbjct: 524 KFPYEG 529
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KFPKEG 8
KFP EG
Sbjct: 525 KFPYEG 530
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 KFPKEG 8
KFP EG
Sbjct: 525 KFPYEG 530
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 3 KFPKEG 8
KFP EG
Sbjct: 525 KFPYEG 530
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 DCKFPKE 7
DCK PK+
Sbjct: 1179 DCKPPKD 1185
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 CKFP 5
CKFP
Sbjct: 2284 CKFP 2287
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 FPKEGSH 10
FP +G H
Sbjct: 75 FPYQGDH 81
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 DCKFPKE 7
DCK PK+
Sbjct: 1178 DCKPPKD 1184
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 KFPKEG 8
+FPK+G
Sbjct: 636 EFPKQG 641
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CKFPKEGSH 10
C+ K GSH
Sbjct: 18 CRILKLGSH 26
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 CKFPKEGSH 10
C+ K GSH
Sbjct: 18 CRILKLGSH 26
67|SequenceR|340|331|VYSCQDCKFP
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VYSCQDCKFP 10
V+ CQD +FP
Sbjct: 926 VHMCQDDEFP 935
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VYSCQDCKFP 10
V+ CQD +FP
Sbjct: 917 VHMCQDDEFP 926
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VYSCQDCKFP 10
V+ CQD +FP
Sbjct: 907 VHMCQDDEFP 916
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 2 YSCQDCKF 9
+ CQDC
Sbjct: 458 FRCQDCNL 465
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 YSCQDCK 8
++C+DCK
Sbjct: 185 HACRDCK 191
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 2 YSCQDCK 8
++C+DCK
Sbjct: 185 HACRDCK 191
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YSCQDCK 8
++C+DCK
Sbjct: 185 HACRDCK 191
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YSCQDCK 8
++C+DCK
Sbjct: 185 HACRDCK 191
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 YSCQDC 7
Y C DC
Sbjct: 230 YRCSDC 235
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 SCQDCKFP 10
+C+DC P
Sbjct: 1392 TCKDCHQP 1399
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 SCQDCKFP 10
+C+DC P
Sbjct: 1368 TCKDCHQP 1375
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYVCENC 1090
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYVCENC 1090
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1076 VYVCENC 1082
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYVCENC 1090
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 VYSCQD 6
+YSCQ+
Sbjct: 321 IYSCQN 326
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 VYSCQDCKFP 10
+YSCQ + P
Sbjct: 177 IYSCQSNEAP 186
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VYSCQD 6
V++CQD
Sbjct: 644 VFTCQD 649
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VYSCQD 6
V++CQD
Sbjct: 644 VFTCQD 649
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYICENC 1090
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYICENC 1090
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYICENC 1090
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYICENC 1090
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 VYSCQDC 7
VY C++C
Sbjct: 1084 VYICENC 1090
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CQDCKFP 10
C+D K+P
Sbjct: 963 CKDKKYP 969
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 1 VYSCQDC 7
VYS DC
Sbjct: 269 VYSTSDC 275
>sp|VE8E2_HPV35|PROTEIN E8^E2C|Human papillomavirus 35
Query: 1 VYSCQDC 7
VYS DC
Sbjct: 80 VYSTSDC 86
>sp|Y126_ADE07|UNCHARACTERIZED 12.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 YSCQDCK 8
Y CQ C+
Sbjct: 27 YHCQPCR 33
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 5 QDCKFP 10
+DCK P
Sbjct: 725 EDCKLP 730
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 2 YSCQDCK 8
+ CQDC+
Sbjct: 435 FQCQDCQ 441
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 VYSCQDCK 8
VYS CK
Sbjct: 231 VYSADHCK 238
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 5 QDCKFP 10
Q+CK P
Sbjct: 175 QNCKIP 180
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 5 QDCKFP 10
Q+CK P
Sbjct: 175 QNCKIP 180
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 4 CQDCKF 9
C DCK+
Sbjct: 273 CLDCKW 278
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 2 YSCQDCKF 9
Y C DC +
Sbjct: 72 YDCLDCAY 79
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 4 CQDCKF 9
C DCK+
Sbjct: 259 CLDCKW 264
68|SequenceR|345|336|HQNSAVYSCQ
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 HQNSAVYS 8
HQN AVY+
Sbjct: 883 HQNKAVYT 890
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 HQNSAVYS 8
HQN AVY+
Sbjct: 883 HQNKAVYT 890
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 HQNSAVYS 8
HQN AVY+
Sbjct: 885 HQNKAVYT 892
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 HQNSAVYS 8
HQN AVY+
Sbjct: 885 HQNKAVYT 892
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 HQNSAVYS 8
HQN AVY+
Sbjct: 882 HQNKAVYT 889
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 HQNSAVYS 8
HQN AVY+
Sbjct: 882 HQNKAVYT 889
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 HQNSAVYS 8
H NSAVYS
Sbjct: 1249 HFNSAVYS 1256
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 HQNSAVY 7
HQN AVY
Sbjct: 883 HQNKAVY 889
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 HQNSAVY 7
HQN AVY
Sbjct: 890 HQNMAVY 896
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 QNSAVYSCQ 10
N+AVY C+
Sbjct: 168 HNAAVYHCE 176
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 QNSAVYSCQ 10
N+AVY C+
Sbjct: 168 HNAAVYHCE 176
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 QNSAVYSCQ 10
N+AVY C+
Sbjct: 168 HNAAVYHCE 176
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 HQNSAVYS 8
H NS+VYS
Sbjct: 1248 HFNSSVYS 1255
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I76AA|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I73A5|NUCLEOPROTEIN A virus (strain A/Port
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I73A3|NUCLEOPROTEIN A virus (strain A/Memphis/1/1973
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I73A2|NUCLEOPROTEIN A virus (strain A/Memphis/4/1973
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I72A4|NUCLEOPROTEIN A virus (strain A/Memphis/101/1972
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I72A2|NUCLEOPROTEIN A virus (strain A/Udorn/307/1972
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I71A1|NUCLEOPROTEIN A virus (strain A/Memphis/1/1971
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I68A6|NUCLEOPROTEIN A virus (strain A/Northern
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I68A4|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I68A2|NUCLEOPROTEIN A virus (strain A/Victoria/5/1968
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I60A0|NUCLEOPROTEIN A virus (strain A/Ann
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I57A5|NUCLEOPROTEIN A virus (strain A/Singapore/1/1957
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I55A0|NUCLEOPROTEIN A virus (strain A/England/19/1955
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I54A2|NUCLEOPROTEIN A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I51A0|NUCLEOPROTEIN A virus (strain A/USA:Albany/12/1951
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I50A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I40A0|NUCLEOPROTEIN A virus (strain A/Hickox/1940
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSQVYS 314
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HQNSAVYSC 9
HQ A ++C
Sbjct: 93 HQGGATFTC 101
>sp|NCAP_I47A0|NUCLEOPROTEIN A virus (strain A/Fort
Query: 2 QNSAVYS 8
QNS VYS
Sbjct: 308 QNSHVYS 314
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 HQNSAVYSC 9
H+N A Y C
Sbjct: 870 HKNEADYKC 878
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 HQNSAVY 7
H+N +VY
Sbjct: 854 HENKSVY 860
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 AVYSC 9
A+YSC
Sbjct: 258 AIYSC 262
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 HQNSAVY 7
HQ+ AVY
Sbjct: 854 HQSGAVY 860
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QNSAVYS 8
+NSA+YS
Sbjct: 674 RNSALYS 680
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 QNSAVYS 8
+NSA+YS
Sbjct: 673 RNSALYS 679
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 QNSAVYS 8
+NSA+YS
Sbjct: 673 RNSALYS 679
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 QNSAVYS 8
+NSA+YS
Sbjct: 674 RNSALYS 680
69|SequenceR|350|341|HRTVEHQNSA
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 1 HRTVEH 6
HRT EH
Sbjct: 258 HRTAEH 263
70|SequenceR|355|346|HVQRAHRTVE
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 RAHRTVE 10
R HRTV+
Sbjct: 296 RRHRTVQ 302
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VQRAHRTV 9
V+R+H TV
Sbjct: 275 VERSHETV 282
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 1 HVQRAH 6
H QRAH
Sbjct: 157 HSQRAH 162
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 QRAHR 7
QRAHR
Sbjct: 2394 QRAHR 2398
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 6 HRTVE 10
HRTVE
Sbjct: 109 HRTVE 113
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 HVQRAHRTV 9
+VQ H+TV
Sbjct: 729 YVQHPHKTV 737
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 HVQRAHRTV 9
+VQ H+TV
Sbjct: 729 YVQHPHKTV 737
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 HVQRAHRTV 9
+VQ H+TV
Sbjct: 729 YVQHPHKTV 737
71|SequenceR|360|351|PKPGNHVQRA
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 KPGNHVQR 9
+PGN+VQR
Sbjct: 449 RPGNYVQR 456
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 KPGNHVQR 9
+PGN+VQ+
Sbjct: 449 RPGNYVQK 456
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 PKPGNH 6
P PGNH
Sbjct: 257 PLPGNH 262
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 PKPGNHV 7
P PG+HV
Sbjct: 295 PTPGSHV 301
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1032 RPGYHTQTA 1040
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1032 RPGYHTQTA 1040
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1032 RPGYHTQTA 1040
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1032 RPGYHTQTA 1040
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1030 RPGYHTQTA 1038
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1030 RPGYHTQTA 1038
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 KPGNHV 7
KPG+HV
Sbjct: 2188 KPGDHV 2193
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1030 RPGYHTQTA 1038
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1030 RPGYHTQTA 1038
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1030 RPGYHTQTA 1038
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 PKPGN 5
P+PGN
Sbjct: 453 PRPGN 457
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 PKPGNHVQR 9
P P H+QR
Sbjct: 1765 PVPTRHIQR 1773
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PKPGNHVQRA 10
P+P + QRA
Sbjct: 2077 PRPAPNYQRA 2086
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PKPGNHVQRA 10
P+P + QRA
Sbjct: 2076 PRPAPNYQRA 2085
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 PKPGNHV 7
P+P +HV
Sbjct: 1733 PEPADHV 1739
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 KPGNHVQRA 10
+PG H Q A
Sbjct: 1032 RPGYHTQIA 1040
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 PKPGNHVQRA 10
P P +QRA
Sbjct: 1770 PVPAPRIQRA 1779
>sp|YVAT_VACCC|UNCHARACTERIZED 8.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PKPGNHVQR 9
P P HV R
Sbjct: 26 PPPTGHVTR 34
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 3 PGNHVQRA 10
PG+ QRA
Sbjct: 82 PGDQAQRA 89
>sp|Y215_ADE02|UNCHARACTERIZED protein F-215|Human adenovirus C serotype 2
Query: 1 PKPGNHVQ 8
P PGN V
Sbjct: 188 PAPGNQVS 195
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 PKPGNHVQRA 10
P P +QRA
Sbjct: 439 PVPAPRIQRA 448
72|SequenceR|365|356|HPCNLPKPGN
>sp|VU84_HHV7J|PROTEIN U84|Human herpesvirus 7 (strain JI)
Query: 1 HPCNLPKPGN 10
HPC L P N
Sbjct: 133 HPCGLCSPKN 142
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PCNLPKPGN 10
PCN+ KP N
Sbjct: 495 PCNITKPLN 503
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2121 PCQVPAP 2127
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PCNLPKP 8
PC LP P
Sbjct: 2117 PCQLPSP 2123
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HPCNLPKPGN 10
+ CNLP+ N
Sbjct: 999 YSCNLPQSQN 1008
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 PCNLPKP 8
PC LP P
Sbjct: 2117 PCQLPAP 2123
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PCNLPKP 8
PC LP P
Sbjct: 2117 PCQLPSP 2123
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PCNLPKPGN 10
P N +PGN
Sbjct: 282 PINCTRPGN 290
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 HPCNLPKPGN 10
H CN+ K GN
Sbjct: 237 HVCNIFKSGN 246
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 2 PCNLPKP 8
PC +P+P
Sbjct: 236 PCYIPEP 242
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 PCNLPKP 8
PC +P+P
Sbjct: 236 PCYIPEP 242
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 2 PCNLPKP 8
PC +P+P
Sbjct: 242 PCYIPEP 248
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 2 PCNLPKP 8
PC +P+P
Sbjct: 236 PCYIPEP 242
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PCNLPKPGN 10
PCNL GN
Sbjct: 569 PCNLGPTGN 577
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2114 PCQVPSP 2120
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQIPSP 2119
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PCNLPKPGN 10
PCNL GN
Sbjct: 569 PCNLGPTGN 577
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2114 PCQVPSP 2120
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CNLPK-PGN 10
CN+PK P N
Sbjct: 6291 CNVPKYPNN 6299
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PCNLPKP 8
PC LP P
Sbjct: 2117 PCQLPCP 2123
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2117 PCQVPAP 2123
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2117 PCQVPAP 2123
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPSP 2119
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPSP 2119
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPSP 2119
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPSP 2119
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 HPCNLPK 7
HP LPK
Sbjct: 40 HPTYLPK 46
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 HPCNLPK 7
HP LPK
Sbjct: 40 HPTYLPK 46
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 3 CNLPKP 8
CNL KP
Sbjct: 54 CNLQKP 59
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2114 PCQVPAP 2120
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2118 PCQVPAP 2124
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2111 PCQVPAP 2117
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2113 PCQVPAP 2119
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 4 NLPKPG 9
N+P PG
Sbjct: 13 NIPNPG 18
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2117 PCQVPAP 2123
>sp|CORE5_ADE12|CORE-CAPSID bridging protein|Human adenovirus A serotype 12
Query: 1 HPCNLPKPG 9
HP +P PG
Sbjct: 282 HPSIVPTPG 290
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2115 PCQVPAP 2121
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2117 PCQVPAP 2123
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2118 PCQVPGP 2124
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 3 CNLPKPG 9
C LP PG
Sbjct: 13 CALPTPG 19
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 CNLPKPG 9
C LP PG
Sbjct: 13 CALPTPG 19
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 CNLPKPG 9
C LP PG
Sbjct: 13 CALPTPG 19
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 PCNLP 6
PCN P
Sbjct: 677 PCNQP 681
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PCNLPKP 8
PC +P P
Sbjct: 2118 PCQVPLP 2124
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 HPCNLPK 7
HP N+P+
Sbjct: 1710 HPENIPE 1716
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 HPCNLPK 7
HP N+P+
Sbjct: 1710 HPENIPE 1716
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 HPCNLP 6
HP N+P
Sbjct: 161 HPLNMP 166
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 HPCNLP 6
HP N+P
Sbjct: 161 HPLNMP 166
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 HPCNLP 6
HP N+P
Sbjct: 161 HPLNMP 166
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PCNLPKPGN 10
P N +PGN
Sbjct: 434 PLNKERPGN 442
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 HPCNLP 6
+PCN P
Sbjct: 871 NPCNKP 876
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 HPCNLP 6
HP N+P
Sbjct: 161 HPLNMP 166
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 HPCNLPKP 8
+P N P P
Sbjct: 842 YPANFPYP 849
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 HPCNLPKP 8
+P N+P P
Sbjct: 858 YPANVPYP 865
>sp|E312_ADE02|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 2
Query: 3 CNLPKPG 9
CN P PG
Sbjct: 83 CNCPNPG 89
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 HPCNLPKP 8
+P N P P
Sbjct: 833 YPANFPYP 840
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 PCNLP 6
PC LP
Sbjct: 971 PCQLP 975
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PCNLPKPGN 10
P N +PGN
Sbjct: 440 PSNKGRPGN 448
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PCNLPKPGN 10
P N +PGN
Sbjct: 434 PSNRGRPGN 442
73|SequenceR|370|361|TKYDCHPCNL
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 2 KYDCHPCNL 10
+YD HP L
Sbjct: 507 RYDLHPAKL 515
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 5 CHPCN 9
CHPC+
Sbjct: 417 CHPCD 421
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 YDCHPCNL 10
Y C PC L
Sbjct: 661 YTCGPCPL 668
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 YDCHPCNL 10
Y C PC L
Sbjct: 661 YTCGPCPL 668
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 YDCHPCNL 10
Y C PC L
Sbjct: 661 YACGPCPL 668
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 YDCHPCNL 10
Y C PC L
Sbjct: 661 YACGPCPL 668
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 YDCHPCNL 10
Y C PC L
Sbjct: 661 YACGPCPL 668
>sp|ORF11_TTVV3|ORF1/1 protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 6 HPCN 9
HPCN
Sbjct: 45 HPCN 48
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 CHPCN 9
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 CHPCN 9
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 CHPCN 9
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 CHPCN 9
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 CHPCN 9
C PCN
Sbjct: 1120 CAPCN 1124
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 1 TKYDCHPCNL 10
+KYD CN+
Sbjct: 75 SKYDLSSCNI 84
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 YDCHPC 8
YD PC
Sbjct: 242 YDTQPC 247
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 YDCHPC 8
YD PC
Sbjct: 242 YDTQPC 247
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 YDCHPCN 9
+D HP N
Sbjct: 815 FDVHPLN 821
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TKYDCHPCN 9
T Y C CN
Sbjct: 150 TVYPCSACN 158
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TKYDCHPCN 9
T Y C CN
Sbjct: 150 TVYPCSACN 158
>sp|VL2_HPV50|MINOR capsid protein L2|Human papillomavirus type 50
Query: 1 TKYDCHP 7
+ YD HP
Sbjct: 488 SDYDLHP 494
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 YDCHPCN 9
YD PC+
Sbjct: 6276 YDAQPCS 6282
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 YDCHPCN 9
YD PC+
Sbjct: 6253 YDAQPCS 6259
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KYDCHP 7
K DCHP
Sbjct: 1189 KGDCHP 1194
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KYDCHP 7
K DCHP
Sbjct: 1189 KGDCHP 1194
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KYDCHP 7
K DCHP
Sbjct: 1190 KGDCHP 1195
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KYDCHP 7
K DCHP
Sbjct: 1189 KGDCHP 1194
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KYDCHP 7
K DCHP
Sbjct: 1190 KGDCHP 1195
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 KYDCHP 7
K DCHP
Sbjct: 1189 KGDCHP 1194
>sp|Y126_ADE07|UNCHARACTERIZED 12.6 kDa early protein|Human adenovirus B serotype 7
Query: 3 YDCHPC 8
Y C PC
Sbjct: 27 YHCQPC 32
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 KYDCHP 7
KY C P
Sbjct: 1489 KYQCRP 1494
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 KYDCHP 7
KY C P
Sbjct: 1489 KYQCRP 1494
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 3 YDCHP 7
YD HP
Sbjct: 525 YDIHP 529
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 3 YDCHP 7
YD HP
Sbjct: 489 YDLHP 493
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 TKYDCHPCNL 10
+KY HP N+
Sbjct: 1705 SKYIVHPENI 1714
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YDCHP 7
YDC P
Sbjct: 155 YDCTP 159
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 TKYDCHPCNL 10
+KY HP N+
Sbjct: 1705 SKYIVHPENI 1714
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 TKYDC 5
+KYDC
Sbjct: 389 SKYDC 393
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 1 TKYDC 5
+KYDC
Sbjct: 389 SKYDC 393
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 6 HPCNL 10
HPCN+
Sbjct: 374 HPCNV 378
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 KYDCHPCNL 10
KYDC+ N+
Sbjct: 120 KYDCNADNI 128
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 6 HPCNL 10
HPCN+
Sbjct: 372 HPCNV 376
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 6 HPCNL 10
HPCN+
Sbjct: 372 HPCNV 376
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 6 HPCNL 10
HPCN+
Sbjct: 372 HPCNV 376
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 6 HPCNL 10
HPCN+
Sbjct: 372 HPCNV 376
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 KYDCHPCN 9
KY C P +
Sbjct: 90 KYTCSPAS 97
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 KYDC 5
KYDC
Sbjct: 346 KYDC 349
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 KYDCHPCN 9
KY C P +
Sbjct: 90 KYTCSPAS 97
74|SequenceR|375|366|NSRDATKYDC
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 NSRDATKYD 9
N+ DAT+Y+
Sbjct: 113 NALDATRYE 121
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SRDATKY 8
SRD TK+
Sbjct: 370 SRDGTKH 376
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 RDATKY 8
RDAT+Y
Sbjct: 1768 RDATQY 1773
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 4 DATKYDC 10
+ATKY C
Sbjct: 174 EATKYGC 180
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 RDATKY 8
RDAT+Y
Sbjct: 1768 RDATQY 1773
75|SequenceR|380|371|VHKKFNSRDA
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VHKKFNSRD 9
VH +F+ RD
Sbjct: 88 VHNRFDIRD 96
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 VHKKFNSRD 9
VH +F+ RD
Sbjct: 88 VHNRFDIRD 96
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 VHKKFNSRD 9
+HK N RD
Sbjct: 427 IHKVLNDRD 435
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 VHKKFNSRD 9
+H+ N RD
Sbjct: 428 IHRTLNDRD 436
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 VHKKFNSRD 9
+H+ N RD
Sbjct: 428 IHRTLNDRD 436
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VHKKFNSRD 9
VH+K + RD
Sbjct: 88 VHEKIDVRD 96
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 HKKFNS 7
H KFNS
Sbjct: 444 HHKFNS 449
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 VHKKFNSRD 9
VH+K + RD
Sbjct: 88 VHEKIDVRD 96
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VHKKFNSRD 9
VH+K RD
Sbjct: 88 VHQKIEVRD 96
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 VHKKFNSRD 9
VH+K RD
Sbjct: 88 VHQKIEVRD 96
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VHKKFNSRD 9
V+K FN+ D
Sbjct: 1375 VYKHFNNYD 1383
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VHKKFNSRD 9
V+K FN+ D
Sbjct: 1375 VYKHFNNYD 1383
76|SequenceR|385|376|NVHLEVHKKF
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 NVHLEVHK 8
N+HL +H+
Sbjct: 3372 NIHLVIHR 3379
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 HLEVHKKF 10
HL V++KF
Sbjct: 920 HLAVYQKF 927
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 HLEVHKKF 10
HL V++KF
Sbjct: 920 HLAVYQKF 927
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 HLEVHKKF 10
HL V++KF
Sbjct: 920 HLAVYQKF 927
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 2 VHLEVH 7
VH EVH
Sbjct: 173 VHTEVH 178
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 HLEVHKK 9
H+E H+K
Sbjct: 103 HVETHEK 109
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 1 NVHLEVHK 8
+VH E+H+
Sbjct: 595 HVHTEMHR 602
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 NVHLEVHK 8
+VH E+H+
Sbjct: 595 HVHTEMHR 602
77|SequenceR|390|381|NFQRPNVHLE
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NFQRPNVH 8
NF+RP+ H
Sbjct: 192 NFRRPSSH 199
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NFQRPNVH 8
NF+RP+ H
Sbjct: 192 NFRRPSSH 199
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NFQRPNVH 8
NF+RP+ H
Sbjct: 192 NFRRPSSH 199
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 RPNVH 8
RPNVH
Sbjct: 2157 RPNVH 2161
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 2 FQRPNVHLE 10
FQR ++HL+
Sbjct: 126 FQRGDMHLQ 134
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 RPNVHLE 10
RP++H+E
Sbjct: 246 RPDLHIE 252
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 NFQRPNVH 8
++Q P VH
Sbjct: 2302 DYQAPTVH 2309
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 5 PNVHLE 10
PN+HL+
Sbjct: 80 PNIHLQ 85
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 5 PNVHLE 10
PN+HL+
Sbjct: 80 PNIHLQ 85
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 5 PNVHLE 10
PN+HL+
Sbjct: 82 PNIHLQ 87
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 QRPNVHLE 10
Q PN H E
Sbjct: 627 QEPNYHEE 634
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 FQRPNVHLE 10
FQ PN +E
Sbjct: 80 FQNPNSTIE 88
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 FQRPNVHLE 10
FQ PN +E
Sbjct: 80 FQNPNSTIE 88
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 FQRPNVHLE 10
FQ PN +E
Sbjct: 80 FQNPNSTIE 88
78|SequenceR|395|386|DCVPCNFQRP
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 DCVPCNFQR 9
DC P NF++
Sbjct: 1371 DCCPVNFKK 1379
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 CVPCNFQR 9
C+PC F R
Sbjct: 436 CIPCCFLR 443
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 DCVPCNFQR 9
+C P NF+R
Sbjct: 1381 ECCPVNFKR 1389
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 DCVPCNFQR 9
+C P NF+R
Sbjct: 1370 ECCPVNFKR 1378
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 DCVPCNFQR 9
+C P NF+R
Sbjct: 1382 ECCPVNFKR 1390
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 DCVPCNFQR 9
+C P NF+R
Sbjct: 1380 ECCPVNFKR 1388
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 DCVPCNFQR 9
+C P NF+R
Sbjct: 1372 ECCPVNFKR 1380
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 DCVPCNFQR 9
+C P NF+R
Sbjct: 1390 ECCPVNFKR 1398
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 CVPCNF 7
C+PC F
Sbjct: 441 CIPCCF 446
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 CVPCNF 7
CVP NF
Sbjct: 935 CVPANF 940
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 CVPCNF 7
CVP NF
Sbjct: 956 CVPANF 961
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1378 ECCPVNFKK 1386
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DCVPCNFQRP 10
DCV FQ P
Sbjct: 275 DCVLVGFQLP 284
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 CVPCNF 7
CVP NF
Sbjct: 936 CVPANF 941
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CVPCN 6
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CVPCN 6
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CVPCN 6
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CVPCN 6
C PCN
Sbjct: 1120 CAPCN 1124
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 CVPCN 6
C PCN
Sbjct: 1120 CAPCN 1124
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 CVPCNF 7
CVP NF
Sbjct: 937 CVPANF 942
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1370 ECCPVNFKK 1378
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1374 ECCPVNFKK 1382
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1388 ECCPVNFKK 1396
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1371 ECCPVNFKK 1379
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1380 ECCPVNFKK 1388
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1372 ECCPVNFKK 1380
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1372 ECCPVNFKK 1380
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1383 ECCPVNFKK 1391
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 DCVPCNFQR 9
+C P NF++
Sbjct: 1369 ECCPVNFKK 1377
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 CVPCNFQRP 10
CVP RP
Sbjct: 643 CVPGEITRP 651
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 CVPCNFQRP 10
CVP RP
Sbjct: 641 CVPGEIARP 649
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 CVPC 5
CVPC
Sbjct: 110 CVPC 113
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 5 CNFQRP 10
CN Q+P
Sbjct: 54 CNLQKP 59
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC----NFQR 9
CVPC NF R
Sbjct: 226 CVPCVRESNFSR 237
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 2 CVPCNFQRP 10
C PC F++P
Sbjct: 57 CRPCQFRQP 65
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 2 CVPC 5
CVPC
Sbjct: 110 CVPC 113
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 CVPC 5
CVPC
Sbjct: 98 CVPC 101
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 CVPCNFQR 9
C+PC +++
Sbjct: 283 CIPCCYEK 290
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 5 CNFQRP 10
C F RP
Sbjct: 231 CQFSRP 236
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 5 CNFQRP 10
C F RP
Sbjct: 230 CQFSRP 235
>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human
Query: 1 DCVPCNF 7
DC CN+
Sbjct: 174 DCERCNY 180
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 DCVPCNF 7
DC CN+
Sbjct: 173 DCERCNY 179
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 CVPCNFQ 8
CVPC ++
Sbjct: 290 CVPCCYE 296
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|VHR2_CWPXG|PROBABLE host range protein 2|Cowpox virus (strain GRI-90 /
Query: 3 VPCNFQR 9
V CNF+R
Sbjct: 135 VVCNFRR 141
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 4 PCNFQ 8
PCN++
Sbjct: 209 PCNYE 213
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 CVPCNFQ 8
CVPC ++
Sbjct: 290 CVPCCYE 296
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 CVPCNFQR 9
C+PC +++
Sbjct: 283 CIPCCYEK 290
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|GO_HHV6G|120 kDa Glycoprotein O|Human herpesvirus 6A (strain GS)
Query: 2 CVPCNFQ 8
CVP N Q
Sbjct: 238 CVPSNDQ 244
>sp|GO_HHV6U|120 kDa Glycoprotein O|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CVPCNFQ 8
CVP N Q
Sbjct: 238 CVPSNDQ 244
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CVPCNFQ 8
CV CN Q
Sbjct: 5306 CVLCNSQ 5312
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CVPCNFQ 8
CV CN Q
Sbjct: 5329 CVLCNSQ 5335
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 CVPC 5
C+PC
Sbjct: 226 CIPC 229
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 2 CVPC 5
CVPC
Sbjct: 226 CVPC 229
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CVPCNFQ 8
C+P +FQ
Sbjct: 11 CIPFSFQ 17
>sp|UL01_HCMVM|GLYCOPROTEIN UL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PCNF 7
PCNF
Sbjct: 66 PCNF 69
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 CVPC 5
C+PC
Sbjct: 226 CIPC 229
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 2 CVPC 5
CVPC
Sbjct: 110 CVPC 113
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CVPCNFQ 8
C+P +FQ
Sbjct: 11 CIPFSFQ 17
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 DCVPCNFQ 8
DCV +FQ
Sbjct: 126 DCVDDHFQ 133
79|SequenceR|400|391|KSAAYDCVPC
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 AAYDCVP 9
A Y CVP
Sbjct: 71 ATYACVP 77
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 AAYDCVP 9
A Y CVP
Sbjct: 69 ATYACVP 75
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 YDCVP 9
YDC P
Sbjct: 155 YDCTP 159
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 2 SAAYDCV 8
S AY+CV
Sbjct: 161 SLAYECV 167
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 SAAYDCV 8
S AY+CV
Sbjct: 161 SLAYECV 167
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 SAAYDCVP 9
SAA DC P
Sbjct: 286 SAAGDCPP 293
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 SAAYDCVP 9
SAA DC P
Sbjct: 192 SAAGDCPP 199
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 SAAYDCVP 9
SAA DC P
Sbjct: 180 SAAGDCPP 187
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 YDCVPC 10
Y C PC
Sbjct: 661 YTCGPC 666
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 5 YDCVPC 10
Y C PC
Sbjct: 661 YTCGPC 666
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 2 SAAYDCV 8
S YDCV
Sbjct: 207 SIDYDCV 213
>sp|DUT_ORFN2|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Orf virus (strain NZ2) (OV
Query: 3 AAYDCV 8
+AYDCV
Sbjct: 35 SAYDCV 40
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 5 YDCVPC 10
Y C PC
Sbjct: 661 YACGPC 666
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 YDCVPC 10
Y C PC
Sbjct: 661 YACGPC 666
>sp|A52_VACCC|PROTEIN A52|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KSAAYDCV 8
K YDC+
Sbjct: 128 KLTVYDCI 135
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 5 YDCVPC 10
Y C PC
Sbjct: 661 YACGPC 666
80|SequenceR|405|396|QLNCKKSAAY
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 LNCKKSAAY 10
L CKKS++Y
Sbjct: 627 LKCKKSSSY 635
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QLNCKK 6
+LNCKK
Sbjct: 325 ELNCKK 330
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QLNCKK 6
+LNCKK
Sbjct: 325 ELNCKK 330
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 LNCKKSAA 9
L CKK+A+
Sbjct: 1320 LGCKKTAS 1327
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 QLNCKKSAAY 10
Q+N K SA Y
Sbjct: 1317 QMNTKLSAVY 1326
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 CKKSAAY 10
C KSA Y
Sbjct: 192 CTKSAVY 198
>sp|GN_HHV6U|ENVELOPE glycoprotein N|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LNCKKSA 8
++CKKSA
Sbjct: 1 MSCKKSA 7
81|SequenceR|410|401|SKFHYQLNCK
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 SKFHYQLNCK 10
S FH+ L C+
Sbjct: 1309 STFHWHLRCQ 1318
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLQC 1317
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1309 STFHWHLRC 1317
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1310 STFHWHLRC 1318
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 SKFHYQLNC 9
S FH+ L C
Sbjct: 1310 STFHWHLRC 1318
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 HYQLNC 9
HY LNC
Sbjct: 1461 HYMLNC 1466
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHITCK 1300
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHITCK 1300
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHIRCK 1300
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHIRCK 1300
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHIACK 1300
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHIACK 1300
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 HYQLNCK 10
HY + CK
Sbjct: 1294 HYHIACK 1300
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 HYQLNCK 10
HY NC+
Sbjct: 1450 HYANNCR 1456
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 FHYQLNC 9
+HY++ C
Sbjct: 381 YHYEIGC 387
>sp|VPR_HV1AN|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 HYQLNCK 10
HY++ C+
Sbjct: 71 HYRIGCQ 77
>sp|VPR_HV1MV|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 HYQLNCK 10
HY++ C+
Sbjct: 71 HYRIGCQ 77
>sp|VPR_HV1YF|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 HYQLNCK 10
HY++ C+
Sbjct: 71 HYRIGCQ 77
>sp|VPR_HV1YB|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 4 HYQLNCK 10
HY++ C+
Sbjct: 71 HYRIGCQ 77
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 4 HYQLNCK 10
HY +CK
Sbjct: 1112 HYVFSCK 1118
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 3 FHYQLN 8
FH+QL+
Sbjct: 707 FHFQLD 712
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 FHYQLN 8
FH+QL+
Sbjct: 707 FHFQLD 712
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 KFHYQLN 8
K H++LN
Sbjct: 3871 KLHFKLN 3877
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 FHYQLNC 9
+HY + C
Sbjct: 381 YHYDIGC 387
82|SequenceR|415|406|CTPHKSKFHY
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 CTPHKS 6
CTPH+S
Sbjct: 572 CTPHRS 577
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 CTPHKS 6
CTPH+S
Sbjct: 572 CTPHRS 577
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 CTPHKSKFHY 10
CTP K F Y
Sbjct: 1142 CTPTKKAFPY 1151
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 CTPHKS 6
CTPH+S
Sbjct: 541 CTPHRS 546
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 CTPHKS 6
CTPH+S
Sbjct: 539 CTPHRS 544
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 CTPHKS 6
CTPH+S
Sbjct: 556 CTPHRS 561
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 CTPHKSKFHY 10
CTP K F Y
Sbjct: 1142 CTPTKKAFPY 1151
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 HKSKFHY 10
HKS +HY
Sbjct: 2780 HKSTWHY 2786
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 HKSKFHY 10
HKS +HY
Sbjct: 2779 HKSTWHY 2785
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 HKSKFHY 10
HKS +HY
Sbjct: 2780 HKSTWHY 2786
>sp|VE6_HPV66|PROTEIN E6|Human papillomavirus 66
Query: 4 HKSKFHY 10
HK +FHY
Sbjct: 124 HKRRFHY 130
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 CTPHKSKFH 9
CT +K+K H
Sbjct: 708 CTQYKTKQH 716
>sp|NSP5_ROTH7|NON-STRUCTURAL protein 5|Rotavirus A (isolate RVA/Human/United
Query: 4 HKSKFHY 10
HKS+ HY
Sbjct: 141 HKSRKHY 147
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CTPHKSKF 8
CT HK+ +
Sbjct: 2219 CTTHKTAY 2226
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CTPHKSKF 8
CT HK+ +
Sbjct: 2219 CTTHKTAY 2226
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 CTPHKS 6
C+P+KS
Sbjct: 58 CSPYKS 63
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PHKSKFH 9
PH+ KF+
Sbjct: 312 PHRKKFN 318
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 499 CVPWISQTHY 508
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 500 CVPWISQTHY 509
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 499 CVPWISQTHY 508
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 498 CVPWISQTHY 507
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CVPWISQTHY 506
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CVPWISQTHY 506
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 498 CVPWISQTHY 507
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CVPWISQTHY 506
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CVPWISQTHY 506
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CTPHKS 6
C+P+KS
Sbjct: 58 CSPYKS 63
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 CTPHKS 6
C+P+KS
Sbjct: 58 CSPYKS 63
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 TPHKSKFHY 10
T H+ FH+
Sbjct: 329 TTHEDSFHF 337
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 3 PHKSKFH 9
PH+ KF+
Sbjct: 312 PHRKKFN 318
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HKSKFHY 10
HK +HY
Sbjct: 2775 HKETWHY 2781
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HKSKFHY 10
HK +HY
Sbjct: 2775 HKETWHY 2781
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HKSKFHY 10
HK +HY
Sbjct: 2775 HKETWHY 2781
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HKSKFHY 10
HK +HY
Sbjct: 2775 HKETWHY 2781
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HKSKFHY 10
HK +HY
Sbjct: 2775 HKETWHY 2781
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CIPWISQTHY 506
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CIPWISQTHY 506
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 498 CIPWISQTHY 507
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 499 CIPWISQTHY 508
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 499 CIPWISQTHY 508
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 2 TPHKSKFHY 10
TP K +F Y
Sbjct: 498 TPDKFRFAY 506
>sp|NSP5_ROTH3|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9])
Query: 4 HKSKFHY 10
H+S+ HY
Sbjct: 141 HRSRKHY 147
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 499 CVPWISQTHY 508
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 498 CVPWISQTHY 507
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 CTPHKSKFHY 10
C P S+ HY
Sbjct: 497 CVPWISQTHY 506
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 TPHKSKF 8
+P+KS+F
Sbjct: 149 SPYKSRF 155
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HKSKFHY 10
H S +HY
Sbjct: 2777 HNSTWHY 2783
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HKSKFHY 10
H S +HY
Sbjct: 2777 HNSTWHY 2783
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HKSKFHY 10
H S +HY
Sbjct: 2777 HSSTWHY 2783
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HKSKFHY 10
H S +HY
Sbjct: 2777 HSSTWHY 2783
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HKSKFHY 10
H S +HY
Sbjct: 2777 HSSTWHY 2783
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 PHKSKFHY 10
P+K +F Y
Sbjct: 824 PYKQQFSY 831
>sp|NSP5_ROTHJ|NON-STRUCTURAL protein 5|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 4 HKSKFHY 10
H+S+ HY
Sbjct: 141 HRSRKHY 147
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 HKSKFH 9
HK K+H
Sbjct: 793 HKYKYH 798
>sp|TAT_HV2NZ|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 2 TPHKSKFH 9
TP K+K H
Sbjct: 85 TPKKTKAH 92
>sp|ADP_ADE02|ADENOVIRUS death protein|Human adenovirus C serotype 2
Query: 3 PHKSKFH 9
PH K H
Sbjct: 80 PHNEKIH 86
>sp|E311_ADE06|EARLY E3A 11.6 kDa glycoprotein|Human adenovirus C serotype 6
Query: 3 PHKSKFH 9
PH K H
Sbjct: 80 PHNEKIH 86
>sp|TAT_HV2ST|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 2 TPHKSKFH 9
TP K+K H
Sbjct: 85 TPKKTKAH 92
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CTPHKSKFHY 10
CT HK + +
Sbjct: 5042 CTNHKPQLSF 5051
83|SequenceR|420|411|MTKNPCTPHK
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 4 NPCTPHK 10
N CTPH+
Sbjct: 570 NLCTPHR 576
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 4 NPCTPHK 10
N CTPH+
Sbjct: 570 NLCTPHR 576
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 4 NPCTPHK 10
N CTPH+
Sbjct: 539 NLCTPHR 545
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 4 NPCTPHK 10
N CTPH+
Sbjct: 554 NLCTPHR 560
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 4 NPCTPHK 10
N CTPH+
Sbjct: 537 NLCTPHR 543
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TKNPCTP 8
T PCTP
Sbjct: 2066 TTGPCTP 2072
>sp|A28_MCV1|ENVELOPE protein A28 homolog|Molluscum contagiosum virus subtype 1
Query: 4 NPCT 7
NPCT
Sbjct: 121 NPCT 124
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 3 KNPC 6
KNPC
Sbjct: 294 KNPC 297
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 2 TKNPCTPHK 10
TK+P TP +
Sbjct: 109 TKDPSTPTR 117
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 2 TKNPCTPHK 10
TK+P TP +
Sbjct: 109 TKDPSTPTR 117
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MTKNPC 6
MT++PC
Sbjct: 1339 MTQDPC 1344
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 2 TKNPC 6
T NPC
Sbjct: 422 TNNPC 426
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 6 CTPH 9
CTPH
Sbjct: 48 CTPH 51
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 MTKNPCTPH 9
+ PC PH
Sbjct: 243 LLSGPCGPH 251
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 TKNPC 6
T NPC
Sbjct: 422 TNNPC 426
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 6 CTPH 9
CTPH
Sbjct: 77 CTPH 80
>sp|TEG3_VZVO|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 KNPCTPH 9
+NP TPH
Sbjct: 190 ENPPTPH 196
>sp|TEG3_VZVD|TEGUMENT protein UL14 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 KNPCTPH 9
+NP TPH
Sbjct: 190 ENPPTPH 196
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 TKNPCTP 8
T NP TP
Sbjct: 3333 TSNPKTP 3339
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TKNPCTP 8
T NP TP
Sbjct: 3333 TSNPKTP 3339
84|SequenceR|425|416|VKSVDMTKNP
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 3 SVDMTKNP 10
SVD+TK P
Sbjct: 330 SVDLTKKP 337
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KSVDMTKNP 10
KSV T NP
Sbjct: 1533 KSVYYTSNP 1541
85|SequenceR|430|421|TKKLKVKSVD
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 KLKVKSVD 10
K+KVKS++
Sbjct: 623 KIKVKSIN 630
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 1 TKKLKVKSV 9
T KL++KS+
Sbjct: 812 TTKLRIKSI 820
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 KLKVKSVD 10
+ KVKSVD
Sbjct: 341 QTKVKSVD 348
86|SequenceR|435|426|AERKKTKKLK
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 AERKKTKK 8
A+RKKTKK
Sbjct: 497 AKRKKTKK 504
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 AERKKTKK 8
A+RK+TKK
Sbjct: 524 AKRKRTKK 531
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 AERKKTKK 8
A+R+KT+K
Sbjct: 496 AKRRKTRK 503
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 ERKKTKK 8
+RKKTK+
Sbjct: 525 KRKKTKR 531
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 ERKKTKK 8
+RKKTK+
Sbjct: 499 KRKKTKR 505
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 ERKKTKK 8
+RK+TKK
Sbjct: 526 KRKRTKK 532
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 AERKKTKKLK 10
A+R+ T KL+
Sbjct: 3 ADRQSTAKLR 12
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 ERKKTKK 8
+RKKTK+
Sbjct: 499 KRKKTKR 505
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 AERKKTKKL 9
A+RK KKL
Sbjct: 652 AKRKAIKKL 660
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 AERKKTKKL 9
A+RK KKL
Sbjct: 652 AKRKAIKKL 660
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 AERKKTKKL 9
A+RK KKL
Sbjct: 652 AKRKAIKKL 660
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ERKKTKK 8
+RKKT+K
Sbjct: 554 DRKKTQK 560
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 ERKKTKKL 9
ERK TK+L
Sbjct: 1238 ERKFTKRL 1245
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ERKKTKK 8
+RKKT+K
Sbjct: 554 DRKKTQK 560
87|SequenceR|440|431|NDPLDAERKK
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 1 NDPLDAE 7
NDP+D E
Sbjct: 234 NDPVDTE 240
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 1 NDPLDAE 7
NDP+D E
Sbjct: 234 NDPVDTE 240
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 1 NDPLDAE 7
NDP+D E
Sbjct: 234 NDPVDTE 240
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)
Query: 1 NDPLDAE 7
NDP+D E
Sbjct: 234 NDPVDTE 240
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 NDPLDAERK 9
ND LDA R+
Sbjct: 216 NDKLDAVRQ 224
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 NDPLDAER 8
+DPL AER
Sbjct: 2344 SDPLMAER 2351
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 NDPLDAER 8
+DPL AER
Sbjct: 2331 SDPLMAER 2338
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 NDPLDAER 8
+DPL AER
Sbjct: 2331 SDPLMAER 2338
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 NDPLDAERK 9
ND LDA R+
Sbjct: 216 NDKLDAVRQ 224
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 PLDAERKK 10
P D ERK+
Sbjct: 69 PKDQERKR 76
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 3 PLDAERKK 10
P D ERK+
Sbjct: 69 PKDQERKR 76
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 3 PLDAERKK 10
P D ERK+
Sbjct: 69 PKDQERKR 76
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 PLDAERKK 10
P D ERK+
Sbjct: 69 PKDQERKR 76
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 PLDAERKK 10
P D ERK+
Sbjct: 69 PKDQERKR 76
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 NDPLDAE 7
+ PLDAE
Sbjct: 2125 SSPLDAE 2131
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 NDPLDAER 8
+DPL AER
Sbjct: 1013 SDPLMAER 1020
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 3 PLDAERKK 10
P D ERK+
Sbjct: 69 PKDQERKR 76
88|SequenceR|445|436|KENTINDPLD
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TINDPLD 10
TI+DP D
Sbjct: 177 TIDDPFD 183
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KENTIND 7
KEN IND
Sbjct: 7038 KENQIND 7044
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ENTINDPLD 10
E+TIND D
Sbjct: 941 EDTINDDED 949
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 KENTINDPLD 10
K NTI P D
Sbjct: 12 KRNTIRRPQD 21
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 KENTINDPLD 10
K NTI P D
Sbjct: 12 KRNTIRRPQD 21
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ENTINDPLD 10
E+TIND D
Sbjct: 941 EDTINDDED 949
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 ENTINDPLD 10
+NTI DP D
Sbjct: 553 KNTIIDPFD 561
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ENTINDPLD 10
E+TIND D
Sbjct: 941 EDTINDDED 949
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 ENTINDPLD 10
E+TIND D
Sbjct: 941 EDTINDDED 949
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 ENTINDPLD 10
E+TIND D
Sbjct: 941 EDTINDDED 949
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ENTINDPLD 10
E+TIND D
Sbjct: 941 EDTINDDED 949
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 NTINDPL 9
NT+ DPL
Sbjct: 1135 NTVYDPL 1141
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 NTINDPL 9
NT+ DPL
Sbjct: 1117 NTVYDPL 1123
>sp|M21_HRSVB|PROTEIN M2-1|Human respiratory syncytial virus B
Query: 1 KENTINDPLD 10
KE+T+ND D
Sbjct: 177 KESTVNDQND 186
>sp|VE1_HPV32|REPLICATION protein E1|Human papillomavirus type 32
Query: 2 ENTINDPLD 10
ENTI+D D
Sbjct: 28 ENTISDDED 36
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 NTINDPLD 10
NTI+ P D
Sbjct: 442 NTISTPFD 449
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KENTINDPLD 10
K +NDPL+
Sbjct: 377 KNTDVNDPLE 386
89|SequenceR|450|441|QEIETKENTI
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 QEIETKEN 8
Q IETKEN
Sbjct: 2292 QRIETKEN 2299
>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24
Query: 2 EIETKENT 9
EIE KENT
Sbjct: 85 EIEQKENT 92
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 QEIETKENTI 10
QE+E+K N +
Sbjct: 3651 QEVESKCNVL 3660
90|SequenceR|455|446|GKIKTQEIET
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 GKIKTQEIET 10
GK+ TQ++ET
Sbjct: 387 GKVPTQDMET 396
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 GKIKTQEI 8
G IKTQE+
Sbjct: 703 GNIKTQEM 710
91|SequenceR|460|451|KGAVDGKIKT
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 AVDGKIKT 10
AVDG IKT
Sbjct: 700 AVDGNIKT 707
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 AVDGKIKT 10
AVDGK+ T
Sbjct: 398 AVDGKVNT 405
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KGAVDGKIKT 10
KG+VD IKT
Sbjct: 21 KGSVDVSIKT 30
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 VDGKIKT 10
+DGKI+T
Sbjct: 832 IDGKIRT 838
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KGAVDGKIK 9
K +DGKIK
Sbjct: 168 KTYIDGKIK 176
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KGAVDGKIK 9
K +DGKIK
Sbjct: 168 KTYIDGKIK 176
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 DGKIKT 10
DGK+KT
Sbjct: 870 DGKMKT 875
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 DGKIKT 10
DGK+KT
Sbjct: 870 DGKMKT 875
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KGAVDGKIKT 10
KG DG+ T
Sbjct: 322 KGVTDGQYAT 331
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KGAVDGKIKT 10
KG DG+ T
Sbjct: 322 KGVTDGQYAT 331
92|SequenceR|465|456|SKENKKGAVD
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 SKENKKGAVD 10
S+EN KG V+
Sbjct: 3021 SRENTKGGVE 3030
93|SequenceR|470|461|KEAKVSKENK
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 KEAKVSKENK 10
+E+K K+NK
Sbjct: 891 QESKARKKNK 900
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KEAKVSKENK 10
+E+K K+NK
Sbjct: 891 QESKARKKNK 900
94|SequenceR|475|466|KSVDRKEAKV
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2529 VDRSEAK 2535
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2529 VDRSEAK 2535
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2528 VDRSEAK 2534
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2523 VDRTEAK 2529
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2523 VDRTEAK 2529
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2523 VDRTEAK 2529
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2523 VDRTEAK 2529
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2523 VDRTEAK 2529
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2526 VDRTEAK 2532
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2526 VDRTEAK 2532
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2526 VDRTEAK 2532
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2526 VDRTEAK 2532
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VDRKEAK 9
VDR EAK
Sbjct: 2526 VDRTEAK 2532
95|SequenceR|480|471|SPKKEKSVDR
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 2 PKKEKSV 8
P+K+KS+
Sbjct: 458 PRKDKSI 464
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 2 PKKEKSV 8
P+K+KS+
Sbjct: 458 PRKDKSI 464
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 2 PKKEKS 7
PKK+KS
Sbjct: 458 PKKDKS 463
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 2 PKKEKS 7
PKK+KS
Sbjct: 458 PKKDKS 463
96|SequenceR|485|476|VSVNNSPKKE
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SVNNSPKK 9
S+NN PKK
Sbjct: 47 SLNNKPKK 54
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 VNNSPK 8
VNN+PK
Sbjct: 621 VNNTPK 626
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 4 NNSPKK 9
NN PKK
Sbjct: 497 NNPPKK 502
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 SVNNSPKK 9
SV+N PK+
Sbjct: 373 SVSNFPKR 380
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 4 NNSPKKE 10
NN+P KE
Sbjct: 424 NNAPAKE 430
97|SequenceR|490|481|TTVQIVSVNN
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 TTVQIVSVN 9
TT+ IVSV+
Sbjct: 268 TTLPIVSVS 276
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TTVQIVSVN 9
TT+ IVSV+
Sbjct: 268 TTLPIVSVS 276
98|SequenceR|495|486|SKRTRTTVQI
>sp|EBNA2_EBVA8|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SKRTRTTVQ 9
SKR RT+ Q
Sbjct: 446 SKRPRTSTQ 454
99|SequenceR|500|491|KVETVSKRTR
>sp|VP7_ROTH7|OUTER capsid glycoprotein VP7|Rotavirus A (isolate RVA/Human/United
Query: 2 VETVSKRTR 10
V+T+SKR+R
Sbjct: 307 VQTMSKRSR 315
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 KVETVS 6
KVETVS
Sbjct: 375 KVETVS 380
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 2 VETVSKRTR 10
++TVS R+R
Sbjct: 126 IKTVSARSR 134
100|SequenceR|505|496|HVDMEKVETV
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 VDMEKVETV 10
+DM VETV
Sbjct: 3702 LDMSSVETV 3710
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 VDMEKVETV 10
+DM VETV
Sbjct: 3702 LDMSSVETV 3710
>sp|VHR2_YMTV5|PROBABLE host range protein 2|Yaba monkey tumor virus (strain
Query: 1 HVDMEKV 7
HVD+EKV
Sbjct: 70 HVDVEKV 76
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 VDMEKVETV 10
++MEK+E +
Sbjct: 1417 LEMEKIEDI 1425
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 VDMEKVETV 10
++MEK+E +
Sbjct: 1417 LEMEKIEDI 1425
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 VDMEKVETV 10
++MEK+E +
Sbjct: 1417 LEMEKIEDI 1425
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 VDMEKVET 9
+ +EKVET
Sbjct: 1128 ISIEKVET 1135
101|SequenceR|510|501|SNSGTHVDME
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 3 SGTHVD 8
SGTH+D
Sbjct: 166 SGTHID 171
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SNSGTHV 7
SN+GTH+
Sbjct: 71 SNNGTHI 77
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 NSGTHVDM 9
N THVDM
Sbjct: 257 NLRTHVDM 264
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 SNSGTHV 7
+NSG+HV
Sbjct: 559 TNSGSHV 565
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 SGTHVDM 9
+G+HVD+
Sbjct: 2089 TGSHVDL 2095
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 5 THVDM 9
THVDM
Sbjct: 260 THVDM 264
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 THVDM 9
THVDM
Sbjct: 260 THVDM 264
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 THVDM 9
TH+DM
Sbjct: 260 THIDM 264
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 THVDM 9
TH+DM
Sbjct: 260 THIDM 264
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 5 THVDM 9
TH+DM
Sbjct: 260 THIDM 264
102|SequenceR|515|506|KSFKESNSGT
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KSFKESNSG 9
++FK SN+G
Sbjct: 6547 EAFKRSNNG 6555
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 SFKESNSGT 10
S+K SN GT
Sbjct: 502 SYKGSNRGT 510
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 SFKESNSGT 10
S+K SN GT
Sbjct: 511 SYKGSNRGT 519
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 KSFKESNSG 9
KSF+ +SG
Sbjct: 195 KSFRPQSSG 203
103|SequenceR|520|511|KSKKTKSFKE
***** No hits found ******
104|SequenceR|525|516|VELKRKSKKT
***** No hits found ******
105|SequenceR|530|521|LSHSDVELKR
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 3 HSDVELK 9
H+DVEL+
Sbjct: 149 HADVELQ 155
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HSDVELKR 10
HSD EL+R
Sbjct: 470 HSDGELRR 477
>sp|UL79_HHV6Z|PROTEIN U52|Human herpesvirus 6B (strain Z29)
Query: 3 HSDVELKR 10
HSD EL R
Sbjct: 93 HSDAELLR 100
>sp|UL79_HHV6U|PROTEIN U52|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HSDVELKR 10
HSD EL R
Sbjct: 93 HSDAELLR 100
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 HSDVELKR 10
H+D+ LKR
Sbjct: 2138 HADILLKR 2145
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 HSDVELKR 10
H+D+ LKR
Sbjct: 2138 HADILLKR 2145
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LSHSDVE 7
L+HSD+E
Sbjct: 113 LTHSDLE 119
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 LSHSDVE 7
L+HSD+E
Sbjct: 113 LTHSDLE 119
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSHSDVE 7
L+HSD+E
Sbjct: 113 LTHSDLE 119
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LSHSDV 6
L+HSDV
Sbjct: 431 LAHSDV 436
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 SHSDVE 7
SHSD E
Sbjct: 313 SHSDTE 318
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SHSDVEL 8
SHSD++
Sbjct: 739 SHSDIDF 745
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 LSHSDVEL 8
LSH VE+
Sbjct: 38 LSHQQVEI 45
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SHSDVEL 8
SHSD++
Sbjct: 739 SHSDIDF 745
106|SequenceR|535|526|NVPGHLSHSD
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPGHLSH 8
VP HL+H
Sbjct: 2105 VPSHLAH 2111
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPGHLSH 8
VP HL+H
Sbjct: 2105 VPSHLAH 2111
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPGHLSH 8
VP HL+H
Sbjct: 2105 VPSHLAH 2111
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPGHLSH 8
VP HL+H
Sbjct: 2105 VPSHLAH 2111
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPGHLSH 8
VP HL+H
Sbjct: 2105 VPSHLAH 2111
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VPGHLSHSD 10
+PG SH D
Sbjct: 101 IPGETSHKD 109
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VPGHLSHSD 10
+PG SH D
Sbjct: 101 IPGETSHKD 109
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VPGHLSHSD 10
+PG SH D
Sbjct: 101 IPGETSHKD 109
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PGHLS 7
PGHLS
Sbjct: 310 PGHLS 314
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PGHLS 7
PGHLS
Sbjct: 310 PGHLS 314
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 NVPGHLS 7
+VPGH +
Sbjct: 165 SVPGHFT 171
>sp|VB18_VARV|ANKYRIN repeat protein B18|Variola virus
Query: 5 HLSHSD 10
HLSH D
Sbjct: 121 HLSHKD 126
>sp|VB18_VAR67|ANKYRIN repeat protein B18|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 HLSHSD 10
HLSH D
Sbjct: 121 HLSHKD 126
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 PGHLSHSD 10
PG +SH D
Sbjct: 457 PGVVSHED 464
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 PGHLS 7
PGHLS
Sbjct: 310 PGHLS 314
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 HLSHSD 10
HLSH D
Sbjct: 121 HLSHRD 126
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 5 HLSHSD 10
HLSH D
Sbjct: 121 HLSHRD 126
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NVPGHLSH 8
++ GH SH
Sbjct: 28 DIEGHASH 35
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NVPGHLSH 8
++ GH SH
Sbjct: 28 DIEGHASH 35
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 NVPGHLSH 8
++ GH SH
Sbjct: 28 DIEGHASH 35
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 4 GHLSH 8
GHL+H
Sbjct: 735 GHLTH 739
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 GHLSH 8
GHL+H
Sbjct: 1548 GHLTH 1552
107|SequenceR|540|531|SSEEDNVPGH
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 EDNVPG 9
EDN+PG
Sbjct: 155 EDNIPG 160
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 EDNVPG 9
EDN+PG
Sbjct: 155 EDNIPG 160
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 EDNVPG 9
EDN+PG
Sbjct: 155 EDNIPG 160
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 SSEEDNVPGH 10
+ E D PGH
Sbjct: 903 AEESDEEPGH 912
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 4 EDNVPG 9
EDNVP
Sbjct: 86 EDNVPA 91
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 4 EDNVPG 9
E+N+PG
Sbjct: 262 EENIPG 267
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 4 EDNVPG 9
E+N+PG
Sbjct: 254 EENIPG 259
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 4 EDNVPG 9
E+N+PG
Sbjct: 254 EENIPG 259
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 4 EDNVPG 9
E+N+PG
Sbjct: 254 EENIPG 259
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EEDNVPGH 10
+++NVPG+
Sbjct: 607 DKNNVPGN 614
108|SequenceR|545|536|KKKKTSSEED
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 KKKKTSSE 8
K+K+TSSE
Sbjct: 1259 KRKETSSE 1266
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 KKKKTSSE 8
K+K+TSSE
Sbjct: 1259 KRKETSSE 1266
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 KKKKTSSE 8
K+K+TSSE
Sbjct: 1259 KRKETSSE 1266
109|SequenceR|550|541|KSEVKKKKKT
***** No hits found ******
110|SequenceR|555|546|SNNKSKSEVK
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 NNKSKSEV 9
+NKS+SE+
Sbjct: 604 SNKSQSEI 611
111|SequenceR|560|551|KPVEQSNNKS
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KPVEQSNN 8
KPVE SN+
Sbjct: 2017 KPVETSNS 2024
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KPVEQSNN 8
KPVE SN+
Sbjct: 2017 KPVETSNS 2024
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KPVEQSNNK 9
KP+EQ+ N+
Sbjct: 1075 KPLEQTTNQ 1083
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PVEQSNNKS 10
P E++ NKS
Sbjct: 228 PCEKTGNKS 236
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PVEQSNNK 9
PV Q NN+
Sbjct: 1025 PVSQHNNR 1032
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PVEQSNNK 9
PV Q NN+
Sbjct: 1025 PVSQHNNR 1032
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 PVEQSNNK 9
PV Q NN+
Sbjct: 745 PVSQHNNR 752
>sp|TAT_HV2SB|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 1 KPVEQSNNK 9
+P+E NNK
Sbjct: 45 RPLETCNNK 53
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 1 KPVEQSNN 8
KP+E NN
Sbjct: 59 KPIEYKNN 66
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 KPVEQSNN 8
KPV+ SN+
Sbjct: 1994 KPVDTSNS 2001
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KPVEQSNN 8
KPV+ SN+
Sbjct: 1994 KPVDTSNS 2001
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 1 KPVEQSNNKS 10
+P+EQS +S
Sbjct: 434 EPIEQSGRQS 443
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PVEQSNN 8
P+E +NN
Sbjct: 184 PIENTNN 190
112|SequenceR|565|556|VKSDGKPVEQ
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 VKSDGKPVEQ 10
V+ DGKPV+
Sbjct: 6291 VRKDGKPVDH 6300
Query: 3 SDGKPV 8
+DGKPV
Sbjct: 123 ADGKPV 128
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 KSDGKPVEQ 10
K DG P EQ
Sbjct: 769 KRDGDPAEQ 777
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 SDGKPV 8
+DGKPV
Sbjct: 123 ADGKPV 128
>sp|VE4_HPV08|PROTEIN E4|Human papillomavirus type 8
Query: 4 DGKPVEQ 10
DG+P EQ
Sbjct: 56 DGRPAEQ 62
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 2 KSDGKPVEQ 10
K DG PV Q
Sbjct: 555 KEDGTPVFQ 563
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 KSDGKPVE 9
K+DG+P +
Sbjct: 600 KTDGRPTD 607
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 KSDGKP 7
+SDGKP
Sbjct: 598 ESDGKP 603
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 VKSDGKP 7
++SDGKP
Sbjct: 338 LESDGKP 344
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 VKSDGKPV 8
+KSDG P+
Sbjct: 802 LKSDGAPL 809
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 3 SDGKPV 8
SDG+P+
Sbjct: 417 SDGEPI 422
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 4 DGKPV 8
DGKPV
Sbjct: 288 DGKPV 292
113|SequenceR|570|561|KKNEEVKSDG
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 KNEEVKSD 9
KNEE+K D
Sbjct: 483 KNEELKED 490
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 KNEEVKSDG 10
K +E+K DG
Sbjct: 551 KEKEIKPDG 559
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 KNEEVKSDG 10
K +E+K DG
Sbjct: 551 KEKEIKPDG 559
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 KNEEVKSDG 10
K +E+K DG
Sbjct: 552 KEKEIKPDG 560
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 NEEVKSDG 10
NEE + DG
Sbjct: 732 NEETEEDG 739
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 1 KKNEEVKSD 9
KKN +K+D
Sbjct: 47 KKNNNIKND 55
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KKNEEVKSD 9
KKN +K+D
Sbjct: 47 KKNNNIKND 55
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 KKNEEVKSDG 10
KK+ EV +DG
Sbjct: 3146 KKHVEVFTDG 3155
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KKNEEVKSDG 10
KK+ EV +DG
Sbjct: 3146 KKHVEVFTDG 3155
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 4 EEVKSDG 10
+E+KSDG
Sbjct: 800 KELKSDG 806
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 KNEEVKSDG 10
+NE+V DG
Sbjct: 1071 ENEKVYDDG 1079
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 KNEEVKSDG 10
+NE+V DG
Sbjct: 1072 ENEKVYDDG 1080
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 KNEEVKSDG 10
+NE+V DG
Sbjct: 1071 ENEKVYDDG 1079
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 KNEEVKSDG 10
+NE+V DG
Sbjct: 1071 ENEKVYDDG 1079
114|SequenceR|575|566|MCTNQKKNEE
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 TNQKKN 8
TNQ+KN
Sbjct: 398 TNQRKN 403
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 CTNQKKN 8
C N+KKN
Sbjct: 270 CYNRKKN 276
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 MCTNQKKNE 9
M +QKKNE
Sbjct: 377 MSFHQKKNE 385
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TNQKKNEE 10
T Q+KNE+
Sbjct: 652 TQQEKNEQ 659
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 MCTNQKKNE 9
M +QKKNE
Sbjct: 377 MSFHQKKNE 385
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 TNQKKNEE 10
T Q+KNE+
Sbjct: 640 TQQEKNEQ 647
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 CTNQKKN 8
C N KKN
Sbjct: 270 CYNHKKN 276
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CTNQKKNEE 10
C Q+K+EE
Sbjct: 4423 CRFQEKDEE 4431
115|SequenceR|580|571|KTSKKMCTNQ
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 KTSKKMCTN 9
KTS ++C N
Sbjct: 5942 KTSDELCVN 5950
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KTSKKMCTNQ 10
K SKKM TN+
Sbjct: 152 KPSKKMPTNK 161
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KTSKKMCTNQ 10
K SKKM TN+
Sbjct: 157 KPSKKMPTNK 166
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 1 KTSKKMCTNQ 10
K SKKM TN+
Sbjct: 155 KPSKKMPTNK 164
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 1 KTSKKMCTNQ 10
K SKKM TN+
Sbjct: 154 KPSKKMPTNK 163
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 1 KTSKKMCTNQ 10
K SKKM TN+
Sbjct: 154 KPSKKMPTNK 163
>sp|VNB_INBMD|GLYCOPROTEIN NB|Influenza B virus (strain B/Maryland/1959)
Query: 2 TSKKMCTN 9
T+KK CTN
Sbjct: 44 TNKKNCTN 51
>sp|VNB_INBSI|GLYCOPROTEIN NB|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 TSKKMCTN 9
T+KK CTN
Sbjct: 44 TNKKNCTN 51
>sp|VNB_INBUS|GLYCOPROTEIN NB|Influenza B virus (strain B/USSR/100/1983)
Query: 2 TSKKMCTN 9
T+KK CTN
Sbjct: 44 TNKKNCTN 51
116|SequenceR|585|576|KLTKKKTSKK
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 KLTKKKTSK 9
KLT KK+SK
Sbjct: 158 KLTYKKSSK 166
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 KLTKKKTSK 9
KLT KK+SK
Sbjct: 158 KLTYKKSSK 166
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 KLTKKKTSK 9
KLT KK+SK
Sbjct: 143 KLTFKKSSK 151
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 KLTKKKTSK 9
KLT KK+SK
Sbjct: 160 KLTYKKSSK 168
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 KLTKKKTSK 9
KLT KK+SK
Sbjct: 160 KLTYKKSSK 168
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KLTKKKT 7
KLT++KT
Sbjct: 206 KLTERKT 212
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLTKKKT 7
KLT++KT
Sbjct: 206 KLTERKT 212
117|SequenceR|590|581|KSSKNKLTKK
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 KSSKNKLTK 9
+SS+N LT+
Sbjct: 159 RSSENPLTR 167
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 1 KSSKNKLTK 9
+SS+N LT+
Sbjct: 159 RSSENPLTR 167
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 KSSKNKLTK 9
+SS+N LT+
Sbjct: 159 RSSENPLTR 167
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KSSKNKLTK 9
+SS+N LT+
Sbjct: 159 RSSENPLTR 167
118|SequenceR|595|586|PKSSKKSSKN
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PKSSKKSSKN 10
PK KK+ +N
Sbjct: 5 PKPQKKNKRN 14
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 PKSSKKSSKN 10
P + KKSS+N
Sbjct: 1500 PTTRKKSSRN 1509
119|SequenceR|600|591|PEKQPPKSSK
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 PEKQPPK 7
PEK PPK
Sbjct: 443 PEKSPPK 449
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PEKQPPKSS 9
P KQPP S
Sbjct: 2315 PAKQPPVPS 2323
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 PEKQPPKSSK 10
P+K PPK +
Sbjct: 454 PDKNPPKEKE 463
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 PEKQPPKSSK 10
P+K PPK +
Sbjct: 445 PDKNPPKEKE 454
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 446 PDKNPPK 452
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 475 PDKNPPK 481
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 PPKSS 9
PPKSS
Sbjct: 3807 PPKSS 3811
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 PPKSS 9
PPKSS
Sbjct: 3807 PPKSS 3811
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 PEKQPPKSSK 10
P+K PPK +
Sbjct: 445 PDKTPPKEKE 454
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 444 PDKSPPK 450
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 PEKQPPK 7
PEKQ PK
Sbjct: 918 PEKQGPK 924
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 445 PDKNPPK 451
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 445 PDKNPPK 451
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 447 PDKNPPK 453
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 PEKQPPK 7
P+K PPK
Sbjct: 447 PDKNPPK 453
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 PEKQPPKSSK 10
P KQ P S+K
Sbjct: 489 PTKQSPTSAK 498
>sp|TAT_HV1YB|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 KQPPKSSK 10
++PPKSSK
Sbjct: 56 RRPPKSSK 63
120|SequenceR|605|596|SGKEVPEKQP
>sp|TEG4_VZVD|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SGKEVPEKQP 10
SG+ EKQP
Sbjct: 232 SGEPYSEKQP 241
>sp|TEG4_VZVO|TEGUMENT protein UL21 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SGKEVPEKQP 10
SG+ EKQP
Sbjct: 232 SGEPYSEKQP 241
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain
Query: 1 SGKEVPEKQ 9
SGK P+KQ
Sbjct: 32 SGKRPPQKQ 40
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 SGKEVPEKQ 9
SGK P+KQ
Sbjct: 32 SGKRPPQKQ 40
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 338 RNVPEKQ 344
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 337 RNVPEKQ 343
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GKEVPEKQ 9
GKE PE++
Sbjct: 925 GKECPEEK 932
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1083 SGKAIPE 1089
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1083 SGKAIPE 1089
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 SGKEVP 6
+GKEVP
Sbjct: 77 NGKEVP 82
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 1 SGKEVP 6
+GKEVP
Sbjct: 77 NGKEVP 82
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 1 SGKEVPEKQP 10
S +VP KQP
Sbjct: 677 SPPQVPHKQP 686
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1081 SGKVIPE 1087
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 SGKEVPEKQP 10
S +VP KQP
Sbjct: 678 SPPQVPHKQP 687
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 SGKEVPEK 8
S KE+P+K
Sbjct: 454 SYKEIPKK 461
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1081 SGKVIPE 1087
>sp|HEMA_I69A0|HEMAGGLUTININ A virus (strain A/England/878/1969
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1081 SGKVIPE 1087
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 SGKEVPEK 8
S KE+P+K
Sbjct: 457 SYKEIPKK 464
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1081 SGKVIPE 1087
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1081 SGKVIPE 1087
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1081 SGKVIPE 1087
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1082 SGKVIPE 1088
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 SGKEVPEK 8
S KE+P+K
Sbjct: 457 SYKEIPKK 464
>sp|HEMA_I70A0|HEMAGGLUTININ A virus (strain A/Qu/7/1970
Query: 3 KEVPEKQ 9
+ VPEKQ
Sbjct: 321 RNVPEKQ 327
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 SGKEVPE 7
SGK +PE
Sbjct: 1075 SGKIIPE 1081
121|SequenceR|610|601|PDMQASGKEV
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PDMQASG 7
PD Q+SG
Sbjct: 606 PDTQSSG 612
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 1 PDMQASGKEV 10
PD+ A+G E+
Sbjct: 105 PDLGAAGAEL 114
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PDMQASG 7
PD +ASG
Sbjct: 604 PDTKASG 610
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PDMQASG 7
PD +ASG
Sbjct: 604 PDTKASG 610
122|SequenceR|615|606|PGMQPPDMQA
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PGMQPP 6
PG++PP
Sbjct: 201 PGIRPP 206
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 PGMQPPDMQA 10
P +Q PD+QA
Sbjct: 36 PMLQAPDLQA 45
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 PGMQPPDMQA 10
P +Q PD+QA
Sbjct: 36 PMLQAPDLQA 45
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 PGMQPPDM 8
PGM P D+
Sbjct: 176 PGMDPEDI 183
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 PGMQPP 6
PG QPP
Sbjct: 477 PGAQPP 482
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GMQPPDMQA 10
G+QP D QA
Sbjct: 2819 GLQPQDTQA 2827
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 GMQPPDMQA 10
G+QP D QA
Sbjct: 2792 GLQPQDTQA 2800
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 GMQPPDMQA 10
G+QP D QA
Sbjct: 2797 GLQPQDTQA 2805
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 PGMQPPDM 8
P +QPPD+
Sbjct: 341 PPLQPPDV 348
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 PGMQPPDM 8
P +QPPD+
Sbjct: 341 PPLQPPDV 348
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 PGMQPPDM 8
P +QPPD+
Sbjct: 341 PPLQPPDV 348
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PGMQPP 6
PG +PP
Sbjct: 477 PGAKPP 482
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PGMQPP 6
PG +PP
Sbjct: 476 PGAKPP 481
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 PGMQPP 6
PG QPP
Sbjct: 477 PGAQPP 482
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PGMQPP 6
PG +PP
Sbjct: 2304 PGYEPP 2309
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PGMQPP 6
PG +PP
Sbjct: 2310 PGYEPP 2315
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PGMQPP 6
PG +PP
Sbjct: 2310 PGYEPP 2315
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PGMQPPD 7
PG++P D
Sbjct: 575 PGIEPSD 581
123|SequenceR|620|611|AETPAPGMQP
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 TPAPGMQP 10
TP+PG +P
Sbjct: 223 TPSPGARP 230
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 AETPAPG 7
+E+PAPG
Sbjct: 195 SESPAPG 201
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 1 AETPAPGM 8
E+P+PGM
Sbjct: 451 VESPSPGM 458
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 1 AETPAPGM 8
E+P+PGM
Sbjct: 451 VESPSPGM 458
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 ETPAPGM 8
E P PGM
Sbjct: 200 ENPKPGM 206
>sp|RNB_HHV2H|PROBABLE RNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 TPAPGMQP 10
TP+ GMQP
Sbjct: 26 TPSDGMQP 33
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AETPAPGMQP 10
AE P PG P
Sbjct: 166 AEQPLPGNVP 175
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 1 AETPAPGMQ 9
+ TP PG+Q
Sbjct: 212 SSTPIPGIQ 220
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AETPAPG 7
+ TP+PG
Sbjct: 355 SRTPSPG 361
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 3 TPAPGMQ 9
TP PG+Q
Sbjct: 503 TPIPGLQ 509
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AETPAPG 7
+ TP+PG
Sbjct: 355 SRTPSPG 361
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AETPAPG 7
+ TP+PG
Sbjct: 355 SRTPSPG 361
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AETPAPGMQP 10
AE P PG P
Sbjct: 172 AERPLPGNVP 181
>sp|VGLJ_CHV1|ENVELOPE glycoprotein J|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 AETPAP 6
AETPAP
Sbjct: 63 AETPAP 68
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 AETPAPGMQP 10
AET G+QP
Sbjct: 158 AETGNQGVQP 167
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AETPAPGMQP 10
A+TP P +QP
Sbjct: 593 AQTPWPVVQP 602
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AETPAPGMQP 10
A+TP P +QP
Sbjct: 593 AQTPWPVVQP 602
124|SequenceR|625|616|PGKQVAETPA
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 PGKQVAET 8
PGKQ +ET
Sbjct: 1991 PGKQTSET 1998
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 PGKQVAET 8
PGKQ +ET
Sbjct: 1991 PGKQTSET 1998
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 PGKQVAET 8
PG+Q+A T
Sbjct: 548 PGRQIAAT 555
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 PGKQVAET 8
PG+Q+A T
Sbjct: 548 PGRQIAAT 555
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 PGKQVAETPA 10
PG+ ETP
Sbjct: 418 PGRSYFETPG 427
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GKQVAETP 9
G+Q ETP
Sbjct: 575 GRQEPETP 582
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GKQVAETP 9
G+Q ETP
Sbjct: 575 GRQEPETP 582
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 PGKQVAETPA 10
PG+ ETP
Sbjct: 401 PGRAYFETPG 410
125|SequenceR|630|621|PEVQVPGKQV
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PEVQVPGKQV 10
P+V +PG Q+
Sbjct: 907 PQVSIPGDQI 916
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PEVQVPGKQV 10
P+V +PG Q+
Sbjct: 907 PQVSIPGDQI 916
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PEVQVPGK 8
PE+Q+PG+
Sbjct: 362 PEIQIPGQ 369
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PEVQVPGK 8
PE+Q+PG+
Sbjct: 364 PEMQIPGR 371
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 PEVQVPG 7
PEV+VP
Sbjct: 130 PEVEVPA 136
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 1 PEVQVPG 7
PEV+VP
Sbjct: 128 PEVEVPA 134
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 PEVQVPG 7
PEV+VP
Sbjct: 128 PEVEVPA 134
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 PEVQVPG 7
PEV+VP
Sbjct: 130 PEVEVPA 136
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 1 PEVQVPG 7
PEV+VP
Sbjct: 128 PEVEVPA 134
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 1 PEVQVPG 7
PEV+VP
Sbjct: 128 PEVEVPA 134
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 365 PEMNIPGR 372
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 351 PEMHIPGQ 358
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PEVQVPGK 8
PE+++PG+
Sbjct: 362 PELRIPGE 369
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 362 PEMNIPGQ 369
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 362 PEMHIPGE 369
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PEVQVPGK 8
PE+++PG+
Sbjct: 364 PEMRIPGE 371
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PEVQVPGK 8
PE+++PG+
Sbjct: 364 PEMRIPGE 371
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 362 PEMNIPGQ 369
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 362 PEMNIPGQ 369
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 362 PEMHIPGE 369
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PEVQVPGK 8
P +VPGK
Sbjct: 442 PSPEVPGK 449
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 363 PELNIPGE 370
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PEVQVP 6
PEV++P
Sbjct: 49 PEVRIP 54
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 1 PEVQVP 6
PEV++P
Sbjct: 49 PEVRIP 54
>sp|PG077_VACCP|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 PEVQVP 6
PEV++P
Sbjct: 49 PEVRIP 54
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PEVQVP 6
PEV++P
Sbjct: 49 PEVRIP 54
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 PEVQVP 6
PEV++P
Sbjct: 49 PEVRIP 54
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 1 PEVQVP 6
PEV++P
Sbjct: 49 PEVRIP 54
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PEVQVPGK 8
PE+ +PG+
Sbjct: 362 PEMAIPGQ 369
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 VQVPGKQV 10
+ VPGK+V
Sbjct: 1174 INVPGKRV 1181
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 VQVPGKQV 10
+ VPGK+V
Sbjct: 1174 ISVPGKRV 1181
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 EVQVPGKQV 10
EV++PG Q+
Sbjct: 115 EVELPGGQL 123
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 PEVQVPGK 8
P VPGK
Sbjct: 501 PSPDVPGK 508
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 EVQVPGKQV 10
++ VPGK+V
Sbjct: 1175 KLSVPGKKV 1183
126|SequenceR|635|626|EMPPPPEVQV
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EMPPPPEVQ 9
++P PPE Q
Sbjct: 1479 DVPSPPETQ 1487
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EMPPPPEVQ 9
++P PPE Q
Sbjct: 1479 DVPSPPETQ 1487
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EMPPPPEVQ 9
+ P PPEV+
Sbjct: 1481 DTPSPPEVE 1489
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EMPPPPEVQ 9
+ P PPEV+
Sbjct: 1480 DTPSPPEVE 1488
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EMPPPPEVQ 9
+ P PPEV+
Sbjct: 1481 DTPSPPEVE 1489
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EMPPPPEVQ 9
++P PPE Q
Sbjct: 1479 DVPSPPETQ 1487
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EMPPPPEVQ 9
++P PPE Q
Sbjct: 1479 DVPSPPETQ 1487
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EMPPPPEVQ 9
++P PPE Q
Sbjct: 1479 DVPSPPETQ 1487
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EMPPPPEVQ 9
E+ PPE+Q
Sbjct: 69 ELQAPPEMQ 77
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 1 EMPPPPEVQ 9
E+ PPE+Q
Sbjct: 69 ELQAPPEMQ 77
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPEVQ 9
PPPP V+
Sbjct: 353 PPPPRVE 359
Query: 2 MPPPPEVQ 9
+PPPP+ +
Sbjct: 52 LPPPPDAE 59
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPEVQ 9
PPPP V+
Sbjct: 353 PPPPRVE 359
Query: 2 MPPPPEVQ 9
+PPPP+ +
Sbjct: 52 LPPPPDAE 59
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 EMPPPPEV 8
+PPPPEV
Sbjct: 565 HLPPPPEV 572
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 MPPPPEV 8
MPPP EV
Sbjct: 724 MPPPAEV 730
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 EMPPPPEV 8
+PPPPEV
Sbjct: 565 HLPPPPEV 572
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 2 MPPPP 6
+PPPP
Sbjct: 625 LPPPP 629
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 PPPP 6
PPPP
Sbjct: 2864 PPPP 2867
Query: 3 PPPP 6
PPPP
Sbjct: 2865 PPPP 2868
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 EMPPPPEVQV 10
E+PP P Q+
Sbjct: 50 ELPPVPIQQI 59
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 EMPPPPEV 8
+ PPPP +
Sbjct: 1422 DAPPPPAI 1429
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPP 6
PPPP
Sbjct: 14 PPPP 17
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPP 6
PPPP
Sbjct: 14 PPPP 17
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 2 MPPPPEVQ 9
MPP P +Q
Sbjct: 142 MPPLPTLQ 149
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 EMPPPPEVQV 10
E+PP P +V
Sbjct: 45 ELPPVPLAKV 54
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 122 LPPPPD 127
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 PPPPEV 8
PPPP +
Sbjct: 1417 PPPPAI 1422
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 EMPPPPEV 8
+ PPPP +
Sbjct: 1429 QSPPPPAI 1436
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 EMPPPPEV 8
+ PPPP +
Sbjct: 1418 DKPPPPAI 1425
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 2 MPPPPEVQV 10
+PPP E V
Sbjct: 20 LPPPSEDSV 28
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 5 PPEVQV 10
PP VQV
Sbjct: 356 PPSVQV 361
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 MPPPPEV 8
+PPPPEV
Sbjct: 566 LPPPPEV 572
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPPEV 8
PPPP +
Sbjct: 110 PPPPSL 115
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PPPPEV 8
PPPP +
Sbjct: 110 PPPPSL 115
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 MPPPPEVQ 9
+PP PE++
Sbjct: 98 LPPDPEIE 105
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EMPPPPEVQV 10
E P PP V
Sbjct: 26 EQPAPPATTV 35
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EMPPPPEVQV 10
E P PP V
Sbjct: 26 EQPAPPATTV 35
>sp|PRO_HTLV2|GAG-PRO polyprotein|Human T-cell leukemia virus 2
Query: 1 EMPPPPEV 8
+PPPP+V
Sbjct: 583 HLPPPPQV 590
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EMPPPPEVQV 10
E P PP V
Sbjct: 26 EQPAPPATTV 35
>sp|UL139_HCMVM|MEMBRANE glycoprotein UL139|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPPP 6
PPPP
Sbjct: 134 PPPP 137
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPVPSVQ 167
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 MPPPPEV 8
+PPPPEV
Sbjct: 566 LPPPPEV 572
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EMPPPPEVQV 10
E PPPP Q
Sbjct: 610 EQPPPPSRQT 619
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 EMPPPP 6
++PPPP
Sbjct: 67 KIPPPP 72
Query: 3 PPPP 6
PPPP
Sbjct: 70 PPPP 73
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EMPPPPEVQV 10
E PPPP Q
Sbjct: 609 EQPPPPSRQT 618
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1444 ETPPPPRI 1451
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 MPPPPEVQV 10
+PPPP +V
Sbjct: 13 LPPPPVSKV 21
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 EMPPPPEVQV 10
E PP PEV V
Sbjct: 96 ERPPSPEVIV 105
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 EMPPPPEVQV 10
E PP PEV V
Sbjct: 96 ERPPSPEVIV 105
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPLPSVQ 167
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EMPPPPEVQ 9
E P PEV+
Sbjct: 2676 ESSPSPEVE 2684
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 MPPPPEVQV 10
+PPPP +
Sbjct: 417 VPPPPSASL 425
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 MPPPP 6
+PPPP
Sbjct: 96 LPPPP 100
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 MPPPP 6
+PPPP
Sbjct: 96 LPPPP 100
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPLPSVQ 167
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPLPSVQ 167
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EMPPPPEVQ 9
E P PEV+
Sbjct: 2676 ESSPSPEVE 2684
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 EMPPPPEVQ 9
E P PEV+
Sbjct: 2676 ESSPSPEVE 2684
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EMPPPPEVQ 9
E P PEV+
Sbjct: 2676 ESSPSPEVE 2684
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPLPSVQ 167
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 416 VPPPPQ 421
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 MPPPPEVQV 10
+PPPP +
Sbjct: 511 VPPPPSASL 519
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1444 ETPPPPAI 1451
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1443 ETPPPPAI 1450
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1453 ETPPPPAI 1460
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1452 ETPPPPAI 1459
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1454 ETPPPPAI 1461
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1452 ETPPPPAI 1459
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1446 ETPPPPAI 1453
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1462 ETPPPPAI 1469
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1441 ETPPPPAI 1448
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 MPPPP 6
+PPPP
Sbjct: 96 LPPPP 100
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1443 ETPPPPAI 1450
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1442 ETPPPPAI 1449
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 EMPPPP 6
+ PPPP
Sbjct: 217 DAPPPP 222
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 EMPPPPEV 8
E PPPP +
Sbjct: 1455 ETPPPPAI 1462
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPLPSVQ 167
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 MPPPPEVQV 10
+PPPP +
Sbjct: 416 VPPPPSASL 424
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PPPPEVQ 9
PP P VQ
Sbjct: 161 PPLPSVQ 167
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 MPPPP 6
+PPPP
Sbjct: 212 VPPPP 216
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 PPPP 6
PPPP
Sbjct: 150 PPPP 153
Query: 3 PPPP 6
PPPP
Sbjct: 151 PPPP 154
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 MPPPP 6
+PPPP
Sbjct: 418 VPPPP 422
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 MPPPPE 7
+PPPP+
Sbjct: 212 VPPPPD 217
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 2 MPPPPE 7
+PPP E
Sbjct: 136 LPPPEE 141
127|SequenceR|640|631|EMQAHEMPPP
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 3 QAHEMPPP 10
Q H +PPP
Sbjct: 16 QTHRLPPP 23
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EMQAHEMP 8
EMQ +E+P
Sbjct: 75 EMQRNELP 82
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 1 EMQAHEMP 8
EMQ +E+P
Sbjct: 75 EMQRNELP 82
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 5 HEMPPP 10
HEM PP
Sbjct: 62 HEMAPP 67
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 EMQAHEMPPP 10
EMQ E+P P
Sbjct: 490 EMQPLEVPVP 499
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 5 HEMPPP 10
HEM PP
Sbjct: 62 HEMAPP 67
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 EMQAHEMPP 9
++Q H PP
Sbjct: 1585 KVQVHAFPP 1593
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1588 VQVHAFPP 1595
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1588 VQVHAFPP 1595
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 MQAHEMPP 9
+Q H PP
Sbjct: 1586 VQVHAFPP 1593
>sp|U24_HHV7J|U24 protein|Human herpesvirus 7 (strain JI)
Query: 5 HEMPPP 10
HE PPP
Sbjct: 3 HETPPP 8
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 HEMPP 9
HE+PP
Sbjct: 1017 HEIPP 1021
128|SequenceR|645|636|RIQAGEMQAH
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 5 GEMQAH 10
GE+Q+H
Sbjct: 92 GELQSH 97
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 5 GEMQAH 10
GE+Q+H
Sbjct: 92 GELQSH 97
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 5 GEMQAH 10
GE+Q+H
Sbjct: 92 GELQSH 97
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GEMQAH 10
GE+Q+H
Sbjct: 92 GELQSH 97
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 5 GEMQAH 10
GE+Q+H
Sbjct: 92 GELQSH 97
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 5 GEMQAH 10
GE+Q+H
Sbjct: 92 GELQSH 97
129|SequenceR|650|641|EDPAPRIQAG
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 2 DPAPRIQA 9
+PAPR QA
Sbjct: 255 NPAPRTQA 262
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 PAPRIQ 8
PAPRIQ
Sbjct: 1772 PAPRIQ 1777
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 DPAPRIQ 8
+PAPR++
Sbjct: 276 EPAPRVE 282
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 PAPRIQ 8
PAPRIQ
Sbjct: 441 PAPRIQ 446
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 PAPRIQ 8
P PRIQ
Sbjct: 1616 PCPRIQ 1621
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PAPRIQAG 10
P PRIQ G
Sbjct: 257 PMPRIQDG 264
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 PAPRIQAG 10
P+P ++AG
Sbjct: 2643 PSPTVEAG 2650
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 EDPAPRIQA 9
E P PRI +
Sbjct: 45 ESPHPRISS 53
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PAPRIQAG 10
P P I+AG
Sbjct: 2643 PNPTIEAG 2650
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 DPAPRIQAG 10
DP PR+ G
Sbjct: 301 DPRPRLGTG 309
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 EDPAPR 6
E PAPR
Sbjct: 196 EPPAPR 201
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 DPAPR 6
DPAPR
Sbjct: 729 DPAPR 733
130|SequenceR|655|646|EMQVPEDPAP
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 QVPEDPAP 10
Q PE PAP
Sbjct: 23 QTPEQPAP 30
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 QVPEDPAP 10
Q PE PAP
Sbjct: 23 QTPEQPAP 30
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 QVPEDPAP 10
Q PE PAP
Sbjct: 23 QTPEQPAP 30
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP+P
Sbjct: 74 VPSDPSP 80
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP+P
Sbjct: 71 VPTDPSP 77
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP+P
Sbjct: 74 VPTDPSP 80
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP+P
Sbjct: 74 VPTDPSP 80
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPTP 81
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 66 VPTDPNP 72
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 64 VPTDPNP 70
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 71 VPTDPNP 77
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 71 VPTDPNP 77
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 76 VPTDPNP 82
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 76 VPTDPNP 82
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 80 VPTDPNP 86
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 VPEDPAP 10
VP DP P
Sbjct: 71 VPTDPNP 77
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 QVPEDPAP 10
Q+P DP+P
Sbjct: 444 QLPRDPSP 451
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 QVPEDPAP 10
Q+P DP+P
Sbjct: 444 QLPRDPSP 451
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 VPEDP 8
+PEDP
Sbjct: 626 IPEDP 630
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 VPEDP 8
+PEDP
Sbjct: 626 IPEDP 630
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 4 VPEDPAP 10
VPEDP P
Sbjct: 156 VPEDPLP 162
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EMQVPEDPAP 10
E+ +PE P P
Sbjct: 187 ELALPEVPGP 196
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 VPEDP 8
+PEDP
Sbjct: 805 IPEDP 809
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 5 PEDPAP 10
PE PAP
Sbjct: 1457 PETPAP 1462
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 MQVPEDPAP 10
++VPE P P
Sbjct: 167 LEVPEGPQP 175
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 3 QVPEDPAP 10
+ P+DP+P
Sbjct: 196 ETPDDPSP 203
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 4 VPEDPAP 10
+PE+P P
Sbjct: 198 MPENPGP 204
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 QVPEDPAP 10
Q+P DP P
Sbjct: 2163 QLPCDPEP 2170
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 QVPEDPAP 10
Q+P DP P
Sbjct: 2163 QLPCDPEP 2170
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 QVPEDPAP 10
Q+P DP P
Sbjct: 2163 QLPCDPEP 2170
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 5 PEDPAP 10
PE P+P
Sbjct: 93 PESPSP 98
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus
Query: 5 PEDPAP 10
PE P+P
Sbjct: 93 PESPSP 98
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 EMQVPEDPA 9
E+QVP DP
Sbjct: 775 EVQVPPDPG 783
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 3 QVPEDPAP 10
Q+P PAP
Sbjct: 182 QIPPTPAP 189
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 EMQVPEDPAP 10
E Q P DP P
Sbjct: 90 ERQGPNDPQP 99
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 EMQVPEDPAP 10
E Q P DP P
Sbjct: 90 ERQGPNDPQP 99
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 MQVPEDPA 9
+ +P+DPA
Sbjct: 143 LDIPDDPA 150
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 MQVPEDPAP 10
+ +PE+P P
Sbjct: 196 LWMPENPKP 204
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 4 VPEDPAP 10
+PE+P P
Sbjct: 198 MPENPRP 204
131|SequenceR|660|651|GEQVVEMQVP
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 GEQVVEMQV 9
G Q +EMQ+
Sbjct: 69 GHQAIEMQM 77
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 GEQVVEMQV 9
G Q +EMQ+
Sbjct: 69 GHQAIEMQM 77
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 368 GGGFIEMQLP 377
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 368 GGGFIEMQLP 377
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 368 GGGFIEMQLP 377
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 368 GGGFIEMQLP 377
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GEQVVEMQ 8
E+V+EMQ
Sbjct: 3147 AEEVLEMQ 3154
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GEQVVEMQ 8
E+V+EMQ
Sbjct: 3147 AEEVLEMQ 3154
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GEQVVEMQ 8
E+V+EMQ
Sbjct: 3143 AEEVLEMQ 3150
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 647 GGGFIEMQLP 656
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 GEQVVEMQVP 10
G +EMQ+P
Sbjct: 648 GGGFIEMQLP 657
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 2 EQVVEMQV 9
EQ+VEM V
Sbjct: 240 EQLVEMDV 247
132|SequenceR|665|656|EKQAPGEQVV
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 2 KQAPGEQV 9
KQ PG+Q+
Sbjct: 307 KQVPGDQM 314
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 3 QAPGEQV 9
+ PGEQV
Sbjct: 178 RCPGEQV 184
133|SequenceR|670|661|VPPLLEKQAP
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 VPPLLEKQAP 10
+ PLL++Q+P
Sbjct: 1179 IVPLLQQQSP 1188
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 LLEKQAP 10
LLE QAP
Sbjct: 67 LLELQAP 73
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas)
Query: 4 LLEKQAP 10
LLE QAP
Sbjct: 67 LLELQAP 73
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PPLLEK 7
PPLL+K
Sbjct: 2301 PPLLQK 2306
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 3 PLLEKQA 9
PLLE+QA
Sbjct: 691 PLLEEQA 697
134|SequenceR|675|666|MQAPEVPPLL
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 QAPEVPP 8
QAP PP
Sbjct: 244 QAPSSPP 250
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 APEVPP 8
APE PP
Sbjct: 1460 APETPP 1465
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 MQAPEVPPLL 10
+Q P+VP LL
Sbjct: 1691 VQPPKVPILL 1700
Query: 2 QAPEVPPL 9
Q P++P L
Sbjct: 15 QVPDIPEL 22
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 APEVPP 8
APE PP
Sbjct: 1450 APETPP 1455
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2415 EAPEMPAL 2422
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 APEVPP 8
APE PP
Sbjct: 1440 APETPP 1445
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2416 EAPEMPAL 2423
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2415 EAPEMPAL 2422
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 APEVPP 8
APE PP
Sbjct: 1441 APETPP 1446
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2416 EAPEMPAL 2423
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2415 EAPEMPAL 2422
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2415 EAPEMPAL 2422
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2415 EAPEMPAL 2422
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 APEVPP 8
APE PP
Sbjct: 1452 APETPP 1457
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 APEVPP 8
APE PP
Sbjct: 1444 APETPP 1449
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 APEVPP 8
APE PP
Sbjct: 1451 APETPP 1456
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 APEVPP 8
APE PP
Sbjct: 1441 APETPP 1446
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2416 EAPEMPAL 2423
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 APEVPP 8
APE PP
Sbjct: 1442 APETPP 1447
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 APEVPP 8
APE PP
Sbjct: 1442 APETPP 1447
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 APEVPP 8
APE PP
Sbjct: 1439 APETPP 1444
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 APEVPP 8
APE PP
Sbjct: 1458 APETPP 1463
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 APEVPP 8
APE PP
Sbjct: 1450 APETPP 1455
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 APEVPP 8
APE PP
Sbjct: 1453 APETPP 1458
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 5 EVPPLL 10
E+PPLL
Sbjct: 45 ELPPLL 50
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 3 APEVPP 8
AP++PP
Sbjct: 658 APKIPP 663
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 MQAPEVPPL 9
M AP+ PP+
Sbjct: 182 MTAPDQPPV 190
>sp|VE2_HPV2A|REGULATORY protein E2|Human papillomavirus type 2a
Query: 2 QAPEVPP 8
QAP PP
Sbjct: 252 QAPTSPP 258
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 QAPEVPPL 9
+APE+P L
Sbjct: 2415 EAPEMPVL 2422
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PEVPPLL 10
PE PPL+
Sbjct: 1682 PEQPPLI 1688
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MQAPEVPPL 9
M PEVPP+
Sbjct: 704 MSPPEVPPV 712
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MQAPEVPPL 9
M PEVPP+
Sbjct: 704 MSPPEVPPV 712
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 2 QAPEVPP 8
QAP PP
Sbjct: 53 QAPSSPP 59
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 APEVPP 8
AP+ PP
Sbjct: 1442 APDTPP 1447
135|SequenceR|680|671|IQAGVMQAPE
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 QAGVMQAPE 10
Q GV+ APE
Sbjct: 870 QKGVLGAPE 878
>sp|Y172_ADE02|UNCHARACTERIZED protein D-172|Human adenovirus C serotype 2
Query: 1 IQAGVMQAPE 10
I GV++ PE
Sbjct: 105 ISGGVLEGPE 114
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 2 QAGVMQAPE 10
QAG +Q PE
Sbjct: 120 QAGAVQGPE 128
136|SequenceR|685|676|MHALVIQAGV
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 2 HALVIQAG 9
HA+VIQ G
Sbjct: 437 HAIVIQGG 444
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 HALVIQAG 9
H LV+QAG
Sbjct: 185 HLLVLQAG 192
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 1 MHALVIQAGV 10
+HA++ +AG+
Sbjct: 306 LHAMMAKAGL 315
137|SequenceR|690|681|PPPLEMHALV
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 PPPLEMHA 8
P PLEMH
Sbjct: 1094 PHPLEMHG 1101
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PPPLEMHA 8
P PLEMH
Sbjct: 1104 PHPLEMHG 1111
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PPPLEMHA 8
P PLEMH
Sbjct: 1104 PHPLEMHG 1111
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 PPPLEMHA 8
PP L +HA
Sbjct: 6 PPELGLHA 13
>sp|RP30_VAR67|DNA-DIRECTED RNA polymerase 30 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PPLEMHA 8
PPL HA
Sbjct: 180 PPLVRHA 186
>sp|RP30_VACCC|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPLEMHA 8
PPL HA
Sbjct: 180 PPLVRHA 186
>sp|RP30_VACCA|DNA-DIRECTED RNA polymerase 30 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PPLEMHA 8
PPL HA
Sbjct: 180 PPLVRHA 186
>sp|RP30_MONPV|DNA-DIRECTED RNA polymerase 30 kDa|Monkeypox virus (MPXV)
Query: 2 PPLEMHA 8
PPL HA
Sbjct: 180 PPLVRHA 186
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 4 LEMHAL 9
LE+HAL
Sbjct: 271 LELHAL 276
138|SequenceR|695|686|QATEMPPPLE
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ATEMPPPLE 10
A MPPPL
Sbjct: 623 AATMPPPLS 631
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ATEMPPPLE 10
A MPPPL
Sbjct: 622 AATMPPPLS 630
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 ATEMPPP 8
A E PPP
Sbjct: 1460 APETPPP 1466
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 ATEMPPP 8
A E PPP
Sbjct: 1440 APETPPP 1446
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 ATEMPPP 8
A E PPP
Sbjct: 1444 APETPPP 1450
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 ATEMPPP 8
A E PPP
Sbjct: 1452 APETPPP 1458
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 ATEMPPP 8
A E PPP
Sbjct: 1442 APETPPP 1448
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 ATEMPPP 8
A E PPP
Sbjct: 1439 APETPPP 1445
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 ATEMPPP 8
AT+ PPP
Sbjct: 178 ATDNPPP 184
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QATEMPPPLE 10
Q T +PPP++
Sbjct: 151 QPTTVPPPID 160
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QATEMPPPLE 10
Q T +PPP++
Sbjct: 152 QPTTVPPPID 161
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 QATEMPPP 8
Q ++PPP
Sbjct: 553 QGVDLPPP 560
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QATEMPPPLE 10
Q T +PPP++
Sbjct: 151 QPTTVPPPID 160
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 QATEMPPP 8
Q ++PPP
Sbjct: 553 QGVDLPPP 560
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 QATEMPPP 8
Q ++PPP
Sbjct: 553 QGVDLPPP 560
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 EMPPPLE 10
EM PPL+
Sbjct: 63 EMAPPLK 69
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 QATEMPPP 8
Q ++PPP
Sbjct: 553 QGVDLPPP 560
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 EMPPPLE 10
EM PPL+
Sbjct: 63 EMAPPLK 69
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 QATEMPPP 8
Q ++PPP
Sbjct: 553 QGVDLPPP 560
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 QATEMPPP 8
+ATE PPP
Sbjct: 3 EATEPPPP 10
139|SequenceR|700|691|QAVETQATEM
***** No hits found ******
140|SequenceR|705|696|PAPGMQAVET
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 3 PGMQAV 8
PGMQA+
Sbjct: 376 PGMQAI 381
>sp|VE8E2_HPV29|PROTEIN E8^E2C|Human papillomavirus 29
Query: 3 PGMQAV 8
PGMQA+
Sbjct: 176 PGMQAI 181
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 PAPGMQAVET 10
P PG + VET
Sbjct: 305 PTPGPREVET 314
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 PGMQA 7
PGMQA
Sbjct: 2380 PGMQA 2384
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PAPGMQAV 8
P P +QAV
Sbjct: 764 PTPDLQAV 771
141|SequenceR|710|701|QAPEMPAPGM
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QAPEMPAP 8
Q PE PAP
Sbjct: 23 QTPEQPAP 30
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QAPEMPAP 8
Q PE PAP
Sbjct: 23 QTPEQPAP 30
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QAPEMPAP 8
Q PE PAP
Sbjct: 23 QTPEQPAP 30
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2415 EAPEMPA 2421
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2415 EAPEMPA 2421
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2415 EAPEMPA 2421
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2415 EAPEMPA 2421
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2415 EAPEMPA 2421
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2416 EAPEMPA 2422
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2416 EAPEMPA 2422
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 3 PEMPAPGM 10
PE P PGM
Sbjct: 199 PENPKPGM 206
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 QAPEMPA 7
+APEMPA
Sbjct: 2416 EAPEMPA 2422
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 QAPEMP 6
+APEMP
Sbjct: 2415 EAPEMP 2420
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 5 MPAPGM 10
MP PG+
Sbjct: 175 MPGPGL 180
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 QAPEMPAP 8
QAP P P
Sbjct: 244 QAPSSPPP 251
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 PEMPAP 8
PE PAP
Sbjct: 1457 PETPAP 1462
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 4 EMPAPG 9
E+PAPG
Sbjct: 208 EIPAPG 213
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1450 APETPPP 1456
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1460 APETPPP 1466
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1440 APETPPP 1446
Query: 3 PEMPAPG 9
PEM PG
Sbjct: 362 PEMNIPG 368
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1452 APETPPP 1458
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1444 APETPPP 1450
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1441 APETPPP 1447
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1451 APETPPP 1457
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1441 APETPPP 1447
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1442 APETPPP 1448
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1439 APETPPP 1445
Query: 3 PEMPAPG 9
PEM PG
Sbjct: 364 PEMQIPG 370
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1458 APETPPP 1464
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 QAPEMPAP 8
QAP PAP
Sbjct: 180 QAPPTPAP 187
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1450 APETPPP 1456
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1453 APETPPP 1459
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 APEMPAP 8
APE P P
Sbjct: 1442 APETPPP 1448
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 QAPEMPAPG 9
+ E PAPG
Sbjct: 193 RGSESPAPG 201
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 4 EMPAPGM 10
E P+PGM
Sbjct: 452 ESPSPGM 458
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 4 EMPAPGM 10
E P+PGM
Sbjct: 452 ESPSPGM 458
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PEMPAPG 9
PEM PG
Sbjct: 362 PEMAIPG 368
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PEMPAPG 9
PEM PG
Sbjct: 362 PEMHIPG 368
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 QAPEMPAPGM 10
Q P PAPG
Sbjct: 437 QPPSAPAPGY 446
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QAPEMPAPG 9
Q P +P+PG
Sbjct: 217 QGPMLPSPG 225
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PEMPAPG 9
PEM PG
Sbjct: 362 PEMNIPG 368
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PEMPAP 8
PE+P P
Sbjct: 191 PEVPGP 196
142|SequenceR|715|706|QAVEMQAPEM
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 2 AVEMQAPE 9
AVE+Q+P+
Sbjct: 63 AVEVQSPD 70
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United
Query: 2 AVEMQAPE 9
AVE+Q+P+
Sbjct: 63 AVEVQSPD 70
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 2 AVEMQAPE 9
AVE+Q+P+
Sbjct: 63 AVEVQSPD 70
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 2 AVEMQAPE 9
AVE+Q+P+
Sbjct: 63 AVEVQSPD 70
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11])
Query: 2 AVEMQAPE 9
A+E+Q+P+
Sbjct: 63 AIEIQSPD 70
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 2 AVEMQAPE 9
A+E+Q+P+
Sbjct: 63 AIEVQSPD 70
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 2 AVEMQAPE 9
AVE Q+P+
Sbjct: 63 AVETQSPD 70
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 QAVEMQ 6
QA+EMQ
Sbjct: 71 QAIEMQ 76
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 QAVEMQ 6
QA+EMQ
Sbjct: 71 QAIEMQ 76
143|SequenceR|720|711|PASEVQAVEM
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 PASEVQAVEM 10
P SEV AVE+
Sbjct: 18 PTSEVGAVEL 27
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 PASEVQAVEM 10
P SEV AVE+
Sbjct: 17 PNSEVGAVEL 26
144|SequenceR|725|716|QVVQMPASEV
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3473 QVVQLPVKD 3481
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3493 QVVQLPVKD 3501
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3523 QVVQLPVKD 3531
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3473 QVVQLPVKD 3481
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3493 QVVQLPVKD 3501
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3523 QVVQLPVKD 3531
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3435 QVVQLPIQD 3443
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QVVQMPASE 9
QVVQ+P +
Sbjct: 3435 QVVQLPIQD 3443
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 3 VQMPASE 9
V+MP SE
Sbjct: 332 VEMPGSE 338
145|SequenceR|730|721|QVPEKQVVQM
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 QVPEKQVVQ 9
Q PE+ ++Q
Sbjct: 125 QPPERSIIQ 133
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 QVPEKQVVQ 9
Q PE+ ++Q
Sbjct: 125 QPPERSIIQ 133
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VPEKQVV 8
VPE+Q++
Sbjct: 173 VPERQLI 179
>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VPEKQVV 8
VPE+Q++
Sbjct: 187 VPERQLI 193
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 2 VPEKQVV 8
VPE+Q++
Sbjct: 187 VPERQLI 193
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 VPEKQVV 8
VPE+Q++
Sbjct: 187 VPERQLI 193
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 3 PEKQVVQM 10
PEKQ+ ++
Sbjct: 79 PEKQISEL 86
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PEKQVV 8
PE+QVV
Sbjct: 95 PERQVV 100
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 3 PEKQVV 8
PE+QVV
Sbjct: 95 PERQVV 100
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 VPEKQVV 8
+PEKQ++
Sbjct: 299 IPEKQML 305
146|SequenceR|735|726|PSLEMQVPEK
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 PSLEMQVP 8
P+LE+Q P
Sbjct: 912 PTLELQNP 919
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 LEMQVPE 9
LEM +PE
Sbjct: 1244 LEMGIPE 1250
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 SLEMQVP 8
SLE+Q P
Sbjct: 619 SLELQTP 625
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 PSLEMQV 7
PS+E+QV
Sbjct: 13 PSVELQV 19
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 PSLEMQVPE 9
P+L +VPE
Sbjct: 549 PALAKKVPE 557
147|SequenceR|740|731|VVEMPPSLEM
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 VVEMPPSLEM 10
+VE+ P LEM
Sbjct: 1005 IVEVQPQLEM 1014
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 VVEMPPSLEM 10
+VE+ P LEM
Sbjct: 1005 IVEVQPQLEM 1014
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VVEMPPSLE 9
++EMPP ++
Sbjct: 1624 MLEMPPRIQ 1632
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VVEMPPSLE 9
++EMPP ++
Sbjct: 1624 MLEMPPRIQ 1632
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VVEMPPSLE 9
++EMPP ++
Sbjct: 1624 MLEMPPRIQ 1632
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VVEMPPSLE 9
++EMPP ++
Sbjct: 1624 MLEMPPRIQ 1632
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VEMPPSLE 9
VE+P SLE
Sbjct: 1240 VELPNSLE 1247
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VEMPPSLE 9
VE+P SLE
Sbjct: 1241 VELPNSLE 1248
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 VEMPPSLE 9
VE+P SLE
Sbjct: 1241 VELPNSLE 1248
>sp|RP35_VAR67|DNA-DIRECTED RNA polymerase 35 kDa|Variola virus (isolate
Query: 1 VVEMPPSL 8
VVE+ PSL
Sbjct: 11 VVELEPSL 18
>sp|RP35_VACCT|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 VVEMPPSL 8
VVE+ PSL
Sbjct: 11 VVELEPSL 18
>sp|RP35_VACCC|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VVEMPPSL 8
VVE+ PSL
Sbjct: 11 VVELEPSL 18
>sp|RP35_VACCA|DNA-DIRECTED RNA polymerase 35 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VVEMPPSL 8
VVE+ PSL
Sbjct: 11 VVELEPSL 18
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 VEMPPSL 8
VE+PP L
Sbjct: 44 VELPPLL 50
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 3 EMPPSLEM 10
+M PS+EM
Sbjct: 466 DMTPSIEM 473
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 3 EMPPSLEM 10
+M PS+EM
Sbjct: 466 DMTPSIEM 473
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 EMPPSLEM 10
+M PS+EM
Sbjct: 466 DMTPSIEM 473
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 3 EMPPSLEM 10
+M PS+EM
Sbjct: 466 DMTPSIEM 473
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 3 EMPPSLEM 10
+M PS+EM
Sbjct: 466 DMTPSIEM 473
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 2 VEMPPSLE 9
VE+PP ++
Sbjct: 333 VELPPMIK 340
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 2 VEMPPSLE 9
VE+PP ++
Sbjct: 333 VELPPMIK 340
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 3 EMPPSLEM 10
+M PS+EM
Sbjct: 466 DMTPSIEM 473
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PPSLE 9
PPSLE
Sbjct: 6 PPSLE 10
>sp|PHOSP_RABVH|PHOSPHOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 VVEMPPSLE 9
V PPSLE
Sbjct: 177 VASGPPSLE 185
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 VVEMPPSLE 9
+ E+P SLE
Sbjct: 2161 LAELPDSLE 2169
148|SequenceR|745|736|VPEKQVVEMP
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 PEKQVVEM 9
PEKQ+ E+
Sbjct: 79 PEKQISEL 86
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 VPEKQVVEMP 10
+PEKQ++ P
Sbjct: 299 IPEKQMLIEP 308
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VPEKQVVEMP 10
VP +Q E P
Sbjct: 734 VPHRQEAETP 743
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 VPEKQVVEM 9
VPEK +EM
Sbjct: 462 VPEKTNLEM 470
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PEKQVV 7
PE+QVV
Sbjct: 95 PERQVV 100
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 2 PEKQVV 7
PE+QVV
Sbjct: 95 PERQVV 100
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 VPEKQVVE 8
+P+KQV +
Sbjct: 4096 IPDKQVFD 4103
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 VPEKQVVE 8
+P+KQV +
Sbjct: 4116 IPDKQVFD 4123
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 VPEKQVVE 8
+P+KQV +
Sbjct: 4146 IPDKQVFD 4153
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VPEKQVVE 8
+P+KQV +
Sbjct: 4096 IPDKQVFD 4103
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VPEKQVVE 8
+P+KQV +
Sbjct: 4116 IPDKQVFD 4123
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VPEKQVVE 8
+P+KQV +
Sbjct: 4146 IPDKQVFD 4153
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 VPEKQVVEMP 10
V +KQ VE P
Sbjct: 139 VEKKQEVEKP 148
149|SequenceR|750|741|SLEIQVPEKQ
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 SLEIQVPEKQ 10
+ EIQ PE+Q
Sbjct: 562 TFEIQGPERQ 571
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 LEIQVP 7
LE+QVP
Sbjct: 774 LEVQVP 779
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 1 SLEIQVPEKQ 10
+ EIQ PE+Q
Sbjct: 560 TFEIQGPEQQ 569
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 531 FHIQVPQK 538
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 529 FHIQVPQK 536
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 427 FHIQVPQK 434
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 546 FHIQVPQK 553
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 525 FHIQVPQK 532
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 549 FHIQVPQK 556
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 543 FHIQVPQK 550
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 550 FHIQVPQK 557
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 574 FHIQVPQK 581
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 558 FHIQVPQK 565
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 449 FHIQVPQK 456
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 476 FHIQVPQK 483
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 SLEIQVP 7
SLE+Q P
Sbjct: 619 SLELQTP 625
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 2 LEIQVPEK 9
IQVP+K
Sbjct: 451 FHIQVPQK 458
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EIQVPEKQ 10
+IQ+PEK+
Sbjct: 853 KIQLPEKE 860
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EIQVPEKQ 10
+IQ+PEK+
Sbjct: 854 KIQLPEKE 861
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 EIQVPEKQ 10
+IQ+PEK+
Sbjct: 852 KIQLPEKE 859
150|SequenceR|755|746|VEMPPSLEIQ
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VEMPPSLE 8
VE+P SLE
Sbjct: 1241 VELPNSLE 1248
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VEMPPSLE 8
VE+P SLE
Sbjct: 1240 VELPNSLE 1247
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 VEMPPSLE 8
VE+P SLE
Sbjct: 1241 VELPNSLE 1248
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VEMPPSLE 8
+EMPP ++
Sbjct: 1625 LEMPPRIQ 1632
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VEMPPSLE 8
+EMPP ++
Sbjct: 1625 LEMPPRIQ 1632
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VEMPPSLE 8
+EMPP ++
Sbjct: 1625 LEMPPRIQ 1632
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 VEMPPSLEIQ 10
+E PS+E+Q
Sbjct: 9 IEFNPSVELQ 18
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 VEMPPSLE 8
+EMPP ++
Sbjct: 1625 LEMPPRIQ 1632
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 VEMPPSL 7
VE+PP L
Sbjct: 44 VELPPLL 50
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 VEMPPSLEIQ 10
VEM P L+++
Sbjct: 160 VEMFPELDLE 169
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PPSLE 8
PPSLE
Sbjct: 6 PPSLE 10
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 VEMPPSLE 8
VE+PP ++
Sbjct: 333 VELPPMIK 340
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 VEMPPSLE 8
VE+PP ++
Sbjct: 333 VELPPMIK 340
151|SequenceR|760|751|PEKQVVEMPP
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 PEKQVVEMPP 10
PEKQ++ PP
Sbjct: 300 PEKQMLIEPP 309
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 EKQVVEMPP 10
EKQ++ PP
Sbjct: 255 EKQIISEPP 263
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 2 EKQVVEMPP 10
EKQ++ PP
Sbjct: 256 EKQILSEPP 264
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 1 PEKQVVEMPP 10
PE+Q++ PP
Sbjct: 300 PERQMLIEPP 309
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 EKQVVEMPP 10
EKQ++ PP
Sbjct: 256 EKQILSEPP 264
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 EKQVVEMPP 10
EKQ++ PP
Sbjct: 257 EKQILSEPP 265
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 EKQVVEMPP 10
EKQ++ PP
Sbjct: 257 EKQILSEPP 265
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PEKQVVEMPP 10
P K +VE PP
Sbjct: 1655 PRKYLVETPP 1664
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PEKQVVEMPP 10
P K +VE PP
Sbjct: 1655 PRKYLVETPP 1664
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 1 PEKQVVEMPP 10
PE Q++ PP
Sbjct: 291 PETQLLIEPP 300
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PEKQVVEMPP 10
PE +V +PP
Sbjct: 1880 PETTLVGIPP 1889
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 PEKQVVEMPP 10
PE Q++ PP
Sbjct: 302 PENQMLIEPP 311
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 255 EQQILSEPP 263
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 PEKQVVEMPP 10
PE Q++ PP
Sbjct: 333 PESQMLIEPP 342
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 PEKQVVEMPP 10
PE Q++ PP
Sbjct: 500 PENQILARPP 509
>sp|VE1_HPV47|REPLICATION protein E1|Human papillomavirus 47
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 257 EQQILSEPP 265
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 1 PEKQVVEMPP 10
PE Q++ PP
Sbjct: 500 PENQILARPP 509
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 256 EQQILSEPP 264
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 258 EQQILSEPP 266
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 259 EEQILSEPP 267
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PEKQVV 6
PE+QVV
Sbjct: 95 PERQVV 100
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 PEKQVVEMPP 10
PE ++ +PP
Sbjct: 1880 PETTLIGIPP 1889
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 256 EQQILSEPP 264
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 256 EQQILSEPP 264
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 EKQVVEMPP 10
E+Q++ PP
Sbjct: 258 EQQILSEPP 266
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 PEKQVV 6
PE+QVV
Sbjct: 95 PERQVV 100
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 1 PEKQVVEMPP 10
PE Q++ PP
Sbjct: 426 PENQILVRPP 435
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 1 PEKQVVEMPP 10
PEK ++ PP
Sbjct: 295 PEKHMLIEPP 304
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 PEKQVVEMPP 10
PEK ++ PP
Sbjct: 295 PEKHMLIEPP 304
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 2 EKQVVEMPP 10
+KQV++ PP
Sbjct: 51 KKQVIKTPP 59
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 PEKQVVEMPP 10
PEK ++ PP
Sbjct: 295 PEKHMLIEPP 304
152|SequenceR|765|756|LEIKVPEKQV
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LEIKVPEKQV 10
L I +P+KQV
Sbjct: 4142 LTIVIPDKQV 4151
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LEIKVPEKQV 10
L I +P+KQV
Sbjct: 4142 LTIVIPDKQV 4151
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LEIKVPEKQV 10
L I +P+KQV
Sbjct: 4092 LTIIIPDKQV 4101
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LEIKVPEKQV 10
L I +P+KQV
Sbjct: 4112 LTIIIPDKQV 4121
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LEIKVPEKQV 10
L I +P+KQV
Sbjct: 4092 LTIIIPDKQV 4101
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LEIKVPEKQV 10
L I +P+KQV
Sbjct: 4112 LTIIIPDKQV 4121
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 IKVPEKQV 10
IK+PEK+V
Sbjct: 841 IKLPEKEV 848
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 4 KVPEKQ 9
K+PE+Q
Sbjct: 78 KIPERQ 83
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 3 IKVPEKQV 10
+ +PEKQ+
Sbjct: 297 LNIPEKQM 304
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 LEIKVPEKQV 10
LE+ PE+++
Sbjct: 337 LEVNPPEQRI 346
153|SequenceR|770|761|EIPPSLEIKV
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 EIPPSLEI 8
+IPPS++I
Sbjct: 361 KIPPSIKI 368
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 2 IPPSLEIKV 10
IPPS+ + V
Sbjct: 347 IPPSVHVSV 355
>sp|VE2_HPV66|REGULATORY protein E2|Human papillomavirus 66
Query: 1 EIPPSLEI 8
+IPPS+++
Sbjct: 354 KIPPSVQV 361
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 EIPPSL 6
EIPP L
Sbjct: 4 EIPPEL 9
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 IPPSLEIKV 10
+PPS +K+
Sbjct: 799 VPPSASVKI 807
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 IPPSLEIKV 10
+PPS +K+
Sbjct: 799 VPPSASVKI 807
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 1 EIPPSL 6
++PPSL
Sbjct: 128 QVPPSL 133
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EIPPSL 6
++PPSL
Sbjct: 128 QVPPSL 133
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EIPPSL 6
++PPSL
Sbjct: 124 QVPPSL 129
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 1 EIPPSL 6
++PPSL
Sbjct: 124 QVPPSL 129
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 1 EIPPSL 6
++PPSL
Sbjct: 107 QVPPSL 112
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PPSLE 7
PPSLE
Sbjct: 6 PPSLE 10
154|SequenceR|775|766|EKQVVEIPPS
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 EKQVVEIPP 9
EKQ++ PP
Sbjct: 255 EKQIISEPP 263
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 EKQVVEIPP 9
EKQ++ PP
Sbjct: 256 EKQILSEPP 264
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 EKQVVEIPP 9
EKQ++ PP
Sbjct: 256 EKQILSEPP 264
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 EKQVVEIPP 9
EKQ++ PP
Sbjct: 257 EKQILSEPP 265
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 EKQVVEIPP 9
EKQ++ PP
Sbjct: 257 EKQILSEPP 265
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 EKQVVEIPP 9
E Q++ +PP
Sbjct: 1564 EVQLIAVPP 1572
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 EKQVVEIPP 9
+KQV++ PP
Sbjct: 51 KKQVIKTPP 59
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 EKQVVEIP 8
E+QV EIP
Sbjct: 537 EEQVKEIP 544
155|SequenceR|780|771|EMQVPEKQVV
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 2 MQVPEKQVV 10
+ +PEKQ++
Sbjct: 297 LNIPEKQML 305
>sp|A47_VACCC|PROTEIN A47|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VPEKQVV 10
VPE+Q++
Sbjct: 187 VPERQLI 193
>sp|A47_VACCA|PROTEIN A47|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VPEKQVV 10
VPE+Q++
Sbjct: 173 VPERQLI 179
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 4 VPEKQVV 10
VPE+Q++
Sbjct: 187 VPERQLI 193
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VPEKQVV 10
VPE+Q++
Sbjct: 187 VPERQLI 193
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EMQVPEKQV 9
++Q+PEK+V
Sbjct: 854 KIQLPEKEV 862
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EMQVPEKQV 9
++Q+PEK+V
Sbjct: 853 KIQLPEKEV 861
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EMQVPEKQV 9
++Q+PEK+V
Sbjct: 852 KIQLPEKEV 860
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 5 PEKQVV 10
PE+QVV
Sbjct: 95 PERQVV 100
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 PEKQVV 10
PE+QVV
Sbjct: 95 PERQVV 100
156|SequenceR|785|776|MPPSLEMQVP
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PPSLEMQVP 10
PPS Q+P
Sbjct: 712 PPSYTQQIP 720
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PPSLEMQVP 10
PPS Q+P
Sbjct: 716 PPSYTQQIP 724
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PPSLEMQVP 10
PPS Q+P
Sbjct: 717 PPSYTQQIP 725
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 PPSLEMQVP 10
PP L+ VP
Sbjct: 713 PPDLDAHVP 721
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 MPPSLEMQVP 10
+ SLE+Q P
Sbjct: 616 LASSLELQTP 625
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 PSLEMQVP 10
P+LE+Q P
Sbjct: 912 PTLELQNP 919
>sp|YVDG_VACCC|UNCHARACTERIZED 10.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PPSLE 6
PPSLE
Sbjct: 6 PPSLE 10
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 MPPSLEM 7
M PS+EM
Sbjct: 467 MTPSIEM 473
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 MPPSLEM 7
M PS+EM
Sbjct: 467 MTPSIEM 473
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 MPPSLEM 7
M PS+EM
Sbjct: 467 MTPSIEM 473
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 MPPSLEM 7
M PS+EM
Sbjct: 467 MTPSIEM 473
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 MPPSLEM 7
M PS+EM
Sbjct: 467 MTPSIEM 473
157|SequenceR|790|781|KQVVGMPPSL
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 KQVVGMPPSL 10
K VVG PPS+
Sbjct: 910 KAVVGRPPSV 919
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 KQVVGMPPSL 10
K VVG PPS+
Sbjct: 909 KAVVGRPPSV 918
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 1 KQVVGMPPSL 10
KQ++ PP L
Sbjct: 256 KQIISEPPKL 265
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 1 KQVVGMPPSL 10
KQ++ PP L
Sbjct: 257 KQILSEPPKL 266
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 KQVVGMPPSL 10
KQ++ PP L
Sbjct: 258 KQILSEPPKL 267
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 KQVVGMPPSL 10
KQ++ PP L
Sbjct: 257 KQILSEPPKL 266
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 KQVVGMPPSL 10
KQ++ PP L
Sbjct: 258 KQILSEPPKL 267
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype
Query: 1 KQVVGMPPSL 10
++ +G PP+L
Sbjct: 10 REYLGRPPTL 19
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 QVVGMPPS 9
VVG+PP+
Sbjct: 55 HVVGVPPA 62
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 2 QVVGMPPSL 10
Q++ PP L
Sbjct: 256 QIIAEPPKL 264
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 5 GMPPSL 10
G PPSL
Sbjct: 1263 GCPPSL 1268
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 5 GMPPSL 10
G PPSL
Sbjct: 1286 GCPPSL 1291
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 5 GMPPSL 10
G PPSL
Sbjct: 1286 GCPPSL 1291
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 QVVGMPP 8
V+G+PP
Sbjct: 55 HVIGVPP 61
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 KQVVGMPP 8
KQV+ PP
Sbjct: 52 KQVIKTPP 59
158|SequenceR|795|786|RQAPEKQVVG
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 APEKQVV 9
APE+QVV
Sbjct: 94 APERQVV 100
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 3 APEKQVV 9
APE+QVV
Sbjct: 94 APERQVV 100
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQMLVG 1163
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 RQAPEKQ 7
R+AP+KQ
Sbjct: 68 REAPQKQ 74
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 RQAPEKQVVG 10
RQ P++ +VG
Sbjct: 1154 RQGPKQILVG 1163
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 QAPEKQ 7
+APEKQ
Sbjct: 916 KAPEKQ 921
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 1 RQAPEKQ 7
RQ+P KQ
Sbjct: 229 RQSPRKQ 235
159|SequenceR|800|791|PPPPERQAPE
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 2 PPPERQAP 9
PPP R+ P
Sbjct: 242 PPPSRKRP 249
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 2 PPPERQAP 9
PPPE AP
Sbjct: 137 PPPEEAAP 144
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 PPPPERQAPE 10
P P+R APE
Sbjct: 115 PSSPKRSAPE 124
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 PPPPERQAPE 10
P P+R APE
Sbjct: 115 PSSPKRSAPE 124
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 PPPPERQAPE 10
P P+R APE
Sbjct: 115 PSSPKRSAPE 124
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPPPERQAPE 10
P PPE Q E
Sbjct: 1481 PSPPETQKAE 1490
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPPPERQAPE 10
P PPE Q E
Sbjct: 1481 PSPPETQKAE 1490
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPPPERQAPE 10
P PPE Q E
Sbjct: 1481 PSPPETQKAE 1490
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPPPERQAPE 10
P PPE Q E
Sbjct: 1481 PSPPETQKAE 1490
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 PPPPERQAPE 10
P PPE Q E
Sbjct: 1481 PSPPETQKAE 1490
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 1 PPPPERQ 7
P PP RQ
Sbjct: 49 PSPPPRQ 55
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PPPPERQ 7
P PP RQ
Sbjct: 49 PSPPPRQ 55
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 2 PPPERQ 7
PPP+RQ
Sbjct: 249 PPPKRQ 254
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 PPERQAPE 10
PP+ +AP+
Sbjct: 1925 PPKEKAPD 1932
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 PPPERQAP 9
PPPE+Q P
Sbjct: 430 PPPEKQDP 437
>sp|UL05_HCMVA|PROTEIN UL5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPPER 6
PPP+R
Sbjct: 81 PPPDR 85
>sp|UL05_HCMVM|PROTEIN UL5|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPPER 6
PPP+R
Sbjct: 81 PPPDR 85
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 PPPERQ 7
P PERQ
Sbjct: 2237 PEPERQ 2242
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 2 PPPERQAP 9
PPP R+ P
Sbjct: 47 PPPSRKRP 54
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PPPPERQ 7
PPPP RQ
Sbjct: 612 PPPPSRQ 618
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PERQAPE 10
PE++ PE
Sbjct: 414 PEKEIPE 420
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 4 PERQAPE 10
PE++ PE
Sbjct: 414 PEKELPE 420
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PPPPERQ 7
PPPP RQ
Sbjct: 611 PPPPSRQ 617
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 3 PPERQAP 9
PP R AP
Sbjct: 3 PPRRSAP 9
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 PPPERQAPE 10
P P+ +APE
Sbjct: 1507 PKPKSRAPE 1515
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 PPPERQA 8
P PERQA
Sbjct: 575 PLPERQA 581
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 PPPERQAP 9
PP E+Q P
Sbjct: 462 PPTEKQDP 469
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 2 PPPERQ 7
PP ERQ
Sbjct: 47 PPGERQ 52
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 PPPERQAP 9
PP ER+ P
Sbjct: 460 PPKEREDP 467
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 PPPERQAPE 10
P PER+AP
Sbjct: 233 PVPERKAPS 241
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 PPPERQAP 9
PP ER+ P
Sbjct: 449 PPKEREDP 456
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 PPPERQAP 9
P PER+ P
Sbjct: 444 PAPERKDP 451
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 PPPPERQ 7
PPP ERQ
Sbjct: 79 PPPEERQ 85
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 2 PPPERQ 7
PPP R+
Sbjct: 122 PPPSRE 127
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 2 PPPERQ 7
PP ERQ
Sbjct: 43 PPGERQ 48
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 2 PPPERQ 7
PP ERQ
Sbjct: 43 PPGERQ 48
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 2 PPPERQ 7
PP ERQ
Sbjct: 43 PPGERQ 48
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 2 PPPERQ 7
PP ERQ
Sbjct: 43 PPGERQ 48
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 2 PPPERQ 7
PP ERQ
Sbjct: 43 PPGERQ 48
160|SequenceR|805|796|LPPERPPPPE
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1461 PETPPPP 1467
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1442 PETPPPP 1448
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1441 PETPPPP 1447
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LPPERPPPP 9
+ PE PPPP
Sbjct: 1438 IAPETPPPP 1446
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1451 PETPPPP 1457
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1442 PETPPPP 1448
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1445 PETPPPP 1451
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1452 PETPPPP 1458
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1453 PETPPPP 1459
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1459 PETPPPP 1465
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1451 PETPPPP 1457
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1443 PETPPPP 1449
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1454 PETPPPP 1460
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PERPPPP 9
PE PPPP
Sbjct: 1443 PETPPPP 1449
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PERPPPP 9
PE+P PP
Sbjct: 25 PEQPAPP 31
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PERPPPP 9
PE+P PP
Sbjct: 25 PEQPAPP 31
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PERPPPP 9
PE+P PP
Sbjct: 25 PEQPAPP 31
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PERPPPP 9
P+ PPPP
Sbjct: 1443 PDTPPPP 1449
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 PERPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 PERPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 3 PERPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PERPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PERPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 PERPPPP 9
P+R PPP
Sbjct: 10 PKRDPPP 16
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 RPPPPE 10
RPPP E
Sbjct: 6047 RPPPGE 6052
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2769 PPGDPPQPE 2777
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2768 PPGDPPQPE 2776
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2791 PPGDPPKPE 2799
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2768 PPGDPPKPE 2776
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2768 PPGDPPQPE 2776
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2769 PPGDPPQPE 2777
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2769 PPGDPPQPE 2777
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2769 PPGDPPQPE 2777
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2768 PPGDPPQPE 2776
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2769 PPGDPPQPE 2777
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PPERP 6
PP+RP
Sbjct: 729 PPDRP 733
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2768 PPGDPPQPE 2776
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2768 PPGDPPRPE 2776
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 PPERPPP 8
PPE P P
Sbjct: 682 PPEIPKP 688
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 PPERPPP 8
PPE P P
Sbjct: 682 PPEIPKP 688
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PERPPPP 9
P RP PP
Sbjct: 156 PRRPKPP 162
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RPPPP 9
RPPPP
Sbjct: 109 RPPPP 113
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RPPPP 9
RPPPP
Sbjct: 109 RPPPP 113
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 6 PPPP 9
PPPP
Sbjct: 2864 PPPP 2867
Query: 6 PPPP 9
PPPP
Sbjct: 2865 PPPP 2868
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2791 PPGDPPRPE 2799
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PERPPPP 9
P R PPP
Sbjct: 603 PARDPPP 609
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 ERPPPP 9
++PPPP
Sbjct: 1418 DKPPPP 1423
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PERPPPP 9
P R PPP
Sbjct: 603 PARDPPP 609
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PERPPPP 9
P R PPP
Sbjct: 603 PARDPPP 609
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 PPERPPP 8
P RPPP
Sbjct: 46 PASRPPP 52
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 PPERPPP 8
P RPPP
Sbjct: 46 PASRPPP 52
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 PPERP 6
PPE+P
Sbjct: 1691 PPEKP 1695
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 2 PPERPPP 8
P E PPP
Sbjct: 497 PSEEPPP 503
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 PPERP 6
PPE+P
Sbjct: 1691 PPEKP 1695
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 PPERP 6
PPE+P
Sbjct: 1691 PPEKP 1695
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 1 LPPERPPPPE 10
LPP P PPE
Sbjct: 512 LPPRNPAPPE 521
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 3 PERPPPPE 10
PE+ PP E
Sbjct: 443 PEKSPPKE 450
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 LPPERPP 7
+PP+ PP
Sbjct: 528 IPPQTPP 534
Query: 4 ERPPPP 9
+ PPPP
Sbjct: 1415 KNPPPP 1420
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PPERPPPPE 10
PP PP PE
Sbjct: 2791 PPGDPPRPE 2799
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 PPPP 9
PPPP
Sbjct: 14 PPPP 17
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 PPPP 9
PPPP
Sbjct: 14 PPPP 17
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 2 PPERPPPP 9
P R PPP
Sbjct: 39 PLYREPPP 46
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 3 PERPP 7
PERPP
Sbjct: 226 PERPP 230
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 LPPERPPP 8
LPP + PP
Sbjct: 2313 LPPAKQPP 2320
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 PPERPPPP 9
P RP PP
Sbjct: 275 PDRRPLPP 282
Query: 2 PPERPPPP 9
P R PPP
Sbjct: 74 PLYRQPPP 81
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPPERPPP 8
LPP P P
Sbjct: 24 LPPTSPAP 31
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 PPERPPPPE 10
PP++PP PE
Sbjct: 2709 PPDQPPTPE 2717
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 6 PPPPE 10
PPPP+
Sbjct: 123 PPPPD 127
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 4 ERPPPP 9
+ PPPP
Sbjct: 1429 QSPPPP 1434
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 LPPERPPP 8
LPP P P
Sbjct: 24 LPPTSPAP 31
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 4 ERPPPPE 10
ERPP PE
Sbjct: 96 ERPPSPE 102
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 4 ERPPPPE 10
ERPP PE
Sbjct: 96 ERPPSPE 102
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 ERPPPP 9
+ PPPP
Sbjct: 1422 DAPPPP 1427
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 LPPERPPPP 9
L +RP PP
Sbjct: 1580 LEGQRPDPP 1588
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LPPERP 6
+PPE P
Sbjct: 1190 IPPESP 1195
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 ERPPPP 9
ERPP P
Sbjct: 487 ERPPTP 492
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PPERPPPP 9
PP PP P
Sbjct: 2777 PPGDPPQP 2784
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 PPERPPPP 9
P R PPP
Sbjct: 74 PLYRQPPP 81
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 ERPPPP 9
ERPP P
Sbjct: 486 ERPPTP 491
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 6 PPPP 9
PPPP
Sbjct: 626 PPPP 629
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 LPPERP 6
+PPE P
Sbjct: 1190 IPPESP 1195
161|SequenceR|810|801|IPEMHLPPER
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 PEMHLPPE 9
PEMH+P E
Sbjct: 362 PEMHIPGE 369
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 PEMHLPPE 9
PEMH+P E
Sbjct: 362 PEMHIPGE 369
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 994 IPKFHLPVER 1003
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 995 IPKFHLPVER 1004
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 996 IPKFHLPVER 1005
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 997 IPKFHLPVER 1006
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 995 IPKFHLPVER 1004
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 996 IPKFHLPVER 1005
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 997 IPKFHLPVER 1006
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
IP+ HLP ER
Sbjct: 996 IPKFHLPVER 1005
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 IPEMHLPPER 10
+P+ HLP ER
Sbjct: 995 VPKFHLPVER 1004
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PEMHLP 7
PEMH+P
Sbjct: 351 PEMHIP 356
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 EMHLPPE 9
+MH+PP+
Sbjct: 492 DMHMPPD 498
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 MHLPPER 10
+H+PP+R
Sbjct: 67 IHVPPKR 73
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 EMHLPPE 9
+MH+PP+
Sbjct: 501 DMHMPPD 507
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 EMHLPP 8
E+H+PP
Sbjct: 2297 EVHIPP 2302
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 3 EMHLPPE 9
EM LPP+
Sbjct: 530 EMSLPPQ 536
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 EMHLPPER 10
EMH PP +
Sbjct: 1108 EMHGPPSK 1115
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 IPEMHLPPER 10
+P H+PP R
Sbjct: 451 LPRTHVPPHR 460
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 IPEMHLPPER 10
+P H+PP R
Sbjct: 446 LPRTHVPPHR 455
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 EMHLPPE 9
+MH+PP+
Sbjct: 501 DMHMPPD 507
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 MHLPPE 9
+HLPPE
Sbjct: 190 LHLPPE 195
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 492 EVHMPPD 498
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 492 EVHMPPD 498
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 492 EVHMPPD 498
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 4 MHLPPER 10
++LPP+R
Sbjct: 16 INLPPDR 22
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 4 MHLPPE 9
MH+PP+
Sbjct: 487 MHVPPD 492
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 5 HLPPE 9
HLPPE
Sbjct: 191 HLPPE 195
Query: 2 PEMHLPP 8
PE+ LPP
Sbjct: 194 PEVLLPP 200
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 MHLPP 8
+HLPP
Sbjct: 2028 LHLPP 2032
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 493 EVHMPPD 499
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 493 EVHMPPD 499
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 493 EVHMPPD 499
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 4 MHLPPER 10
+H+ PER
Sbjct: 93 VHITPER 99
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HLPPER 10
+LPPE+
Sbjct: 2624 YLPPEK 2629
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HLPPER 10
+LPPE+
Sbjct: 2624 YLPPEK 2629
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HLPPER 10
+LPPE+
Sbjct: 2624 YLPPEK 2629
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HLPPER 10
+LPPE+
Sbjct: 2624 YLPPEK 2629
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HLPPER 10
+LPPE+
Sbjct: 2624 YLPPEK 2629
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 EMHLPPE 9
+MH PP+
Sbjct: 500 DMHTPPD 506
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 EMHLPPE 9
E+H+PP+
Sbjct: 493 EVHMPPD 499
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 EMHLPPE 9
+MH PP+
Sbjct: 502 DMHTPPD 508
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 EMHLPPE 9
+MH PP+
Sbjct: 502 DMHTPPD 508
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 HLPPE 9
H+PPE
Sbjct: 293 HVPPE 297
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 EMHLPPE 9
+MH PP+
Sbjct: 500 DMHTPPD 506
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 IPEMHLPPE 9
IP + +PP+
Sbjct: 163 IPHVWMPPQ 171
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IPEMHLPPE 9
IP + +PP+
Sbjct: 163 IPHVWMPPQ 171
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 IPEMHLPPE 9
IPE+ PP+
Sbjct: 1192 IPEVWHPPD 1200
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 IPEMHLPPE 9
IPE+ PP+
Sbjct: 1192 IPEVWHPPD 1200
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 IPEMHLPPE 9
IPE+ PP+
Sbjct: 1192 IPEVWHPPD 1200
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 IPEMHLPPE 9
IPE+ PP+
Sbjct: 1192 IPEVWHPPD 1200
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 IPEMHLPPE 9
IP + +PP+
Sbjct: 164 IPHVWMPPQ 172
162|SequenceR|815|806|PPKKSIPEMH
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 KSIPEMH 10
KS+P MH
Sbjct: 2521 KSVPNMH 2527
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 KSIPEMH 10
KS+P MH
Sbjct: 2521 KSVPNMH 2527
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PPKKSIPEM 9
PP+ SIP M
Sbjct: 746 PPRMSIPFM 754
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PPKKSIPEM 9
PP+ SIP M
Sbjct: 746 PPRMSIPFM 754
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PPKKSIPEM 9
PP+ SIP M
Sbjct: 746 PPRMSIPFM 754
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PPKKSIPEM 9
PP+ SIP M
Sbjct: 750 PPRMSIPFM 758
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PPKKSIPEM 9
PP+ SIP M
Sbjct: 747 PPRMSIPFM 755
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PPKKSIPEM 9
PP+ S+P M
Sbjct: 744 PPRMSVPFM 752
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 747 PPRMSIP 753
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 767 PPRMSIP 773
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 747 PPRMSIP 753
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PKKSIPE 8
P+K IPE
Sbjct: 414 PEKEIPE 420
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 745 PPRMSIP 751
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 745 PPRMSIP 751
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 KKSIPEM 9
K+SIPE+
Sbjct: 221 KRSIPEI 227
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 3 KKSIPEM 9
K+SIPE+
Sbjct: 221 KRSIPEI 227
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 747 PPRMSIP 753
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 745 PPRISIP 751
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 773 PPRISIP 779
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PPKKSIP 7
PP+ S+P
Sbjct: 745 PPRMSVP 751
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 PPKKSIP 7
PP+ SIP
Sbjct: 749 PPRMSIP 755
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 PKKSIPE 8
PK+S PE
Sbjct: 118 PKRSAPE 124
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 PKKSIPE 8
PK+S PE
Sbjct: 118 PKRSAPE 124
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 PPKKSIPEMH 10
P K IPE H
Sbjct: 962 PNKVKIPETH 971
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 PPKKSIPEMH 10
P K IPE H
Sbjct: 962 PNKVKIPETH 971
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PPKKSIPE 8
PP +IPE
Sbjct: 1312 PPTVTIPE 1319
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 2 PKKSIPE 8
P+K +PE
Sbjct: 414 PEKELPE 420
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 KSIPEMH 10
+S+P MH
Sbjct: 2267 ESLPNMH 2273
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 PPKKSIPE 8
PP IPE
Sbjct: 1622 PPADGIPE 1629
163|SequenceR|820|811|KDKRLPPKKS
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 KDKRLPPKKS 10
KDK L PKKS
Sbjct: 473 KDKALSPKKS 482
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 4 RLPPKK 9
RLPPKK
Sbjct: 199 RLPPKK 204
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DKRLPPKKS 10
DKR+ P K+
Sbjct: 153 DKRIRPSKN 161
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 2 DKRLPPKKS 10
DKR+ P K+
Sbjct: 139 DKRIRPSKN 147
>sp|VCCL3_HHV8P|PROTEIN vCCL3|Human herpesvirus 8 type P
Query: 4 RLPPKK 9
RLPP K
Sbjct: 46 RLPPDK 51
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 KRLPPK 8
K+LPPK
Sbjct: 33 KKLPPK 38
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 KDKRLPPK 8
+ KR+PP+
Sbjct: 357 ESKRVPPR 364
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 KDKRLPPK 8
+ KR+PP+
Sbjct: 359 ESKRVPPR 366
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 3 KRLPPK 8
KR+PP+
Sbjct: 354 KRVPPR 359
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 4 RLPPKK 9
R+PPKK
Sbjct: 109 RVPPKK 114
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 KDKRLPPKKS 10
KDK L KKS
Sbjct: 120 KDKILSKKKS 129
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 KDKRLPPKKS 10
KDK L KKS
Sbjct: 120 KDKILSKKKS 129
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KDKRLPPKKS 10
KDK L KKS
Sbjct: 120 KDKILSKKKS 129
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 4 RLPPKK 9
R+PPKK
Sbjct: 111 RVPPKK 116
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KDKRLPPKKS 10
KDK L KKS
Sbjct: 120 KDKILSKKKS 129
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 KDKRLPPKKS 10
KDK L KKS
Sbjct: 120 KDKILSKKKS 129
164|SequenceR|825|816|NSKEKKDKRL
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NSKEKKDKR 9
N K+K DKR
Sbjct: 122 NDKQKDDKR 130
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NSKEKKDKRL 10
N +KK KRL
Sbjct: 328 NKTKKKIKRL 337
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 4 EKKDKRL 10
+KKDK+L
Sbjct: 784 QKKDKQL 790
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 4 EKKDKRL 10
+KKDK+L
Sbjct: 784 QKKDKQL 790
165|SequenceR|830|821|RESQMNSKEK
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 ESQMNSKE 9
ESQ+++KE
Sbjct: 2069 ESQISTKE 2076
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 ESQMNSKE 9
ESQ+++KE
Sbjct: 2089 ESQISTKE 2096
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 ESQMNSKE 9
ESQ+++KE
Sbjct: 2119 ESQISTKE 2126
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 ESQMNSKE 9
ESQ+++KE
Sbjct: 2069 ESQISTKE 2076
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 ESQMNSKE 9
ESQ+++KE
Sbjct: 2089 ESQISTKE 2096
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 ESQMNSKE 9
ESQ+++KE
Sbjct: 2119 ESQISTKE 2126
166|SequenceR|835|826|QEKRARESQM
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EKRARESQM 10
E+R RE+QM
Sbjct: 2 EERGRETQM 10
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EKRARESQM 10
E+R RE+QM
Sbjct: 2 EERGRETQM 10
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 1 QEKRARESQ 9
+EK+ARE+Q
Sbjct: 68 REKKAREAQ 76
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 1 QEKRARESQ 9
+EK+ARE+Q
Sbjct: 68 REKKAREAQ 76
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 1 QEKRARESQ 9
+EK+ARE+Q
Sbjct: 68 REKKAREAQ 76
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 QEKRARES 8
QE+RARE+
Sbjct: 1428 QERRAREA 1435
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 3 KRARESQM 10
K+A+ES M
Sbjct: 110 KKAKESDM 117
167|SequenceR|840|831|VEILVQEKRA
***** No hits found ******
168|SequenceR|845|836|VPVLGVEILV
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 2 PVLGVEIL 9
PV+G E+L
Sbjct: 461 PVVGAELL 468
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 2 PVLGVEIL 9
PV+G E+L
Sbjct: 461 PVVGAELL 468
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 VPVLGVE 7
VPV+G++
Sbjct: 206 VPVMGID 212
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 1 VPVLGVE 7
VPV+G++
Sbjct: 206 VPVMGID 212
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 1 VPVLGVE 7
VPV+G++
Sbjct: 206 VPVMGID 212
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 VPVLGVE 7
VPV GVE
Sbjct: 644 VPVEGVE 650
169|SequenceR|850|841|LWSDKVPVLG
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 LWSDKVPVL 9
+W D+VP+L
Sbjct: 1392 VWGDEVPLL 1400
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 LWSDKVPVL 9
+W D+VP+L
Sbjct: 1389 VWGDEVPLL 1397
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 WSDKVPVL 9
WSD PV
Sbjct: 2053 WSDDTPVF 2060
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 WSDKVPVL 9
WSD PV
Sbjct: 2053 WSDDTPVF 2060
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 WSDKVPVL 9
WSD PV
Sbjct: 2053 WSDDTPVF 2060
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 LWSDKVPVL 9
+W ++VP+L
Sbjct: 1379 VWGEEVPLL 1387
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LWSDKVPVL 9
+W D PVL
Sbjct: 44 VWEDATPVL 52
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 WSDKVPVLG 10
WS + P++G
Sbjct: 6194 WSVEYPIIG 6202
Query: 1 LWSDKVPVL 9
L +DK PVL
Sbjct: 6223 LLADKFPVL 6231
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LWSDKVPVL 9
L +DK PVL
Sbjct: 6246 LLADKFPVL 6254
>sp|RDRP_INCJJ|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 5 KVPVLG 10
KVPV+G
Sbjct: 205 KVPVMG 210
>sp|RDRP_INCJH|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain
Query: 5 KVPVLG 10
KVPV+G
Sbjct: 205 KVPVMG 210
>sp|RDRP_INCAA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza C virus (strain C/Ann
Query: 5 KVPVLG 10
KVPV+G
Sbjct: 205 KVPVMG 210
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 4 DKVPVLG 10
DK PVLG
Sbjct: 220 DKHPVLG 226
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 4 DKVPVLG 10
DK PVLG
Sbjct: 220 DKHPVLG 226
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 4 DKVPVL 9
D+VPVL
Sbjct: 40 DRVPVL 45
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 LWSDKV 6
LW DK+
Sbjct: 338 LWGDKI 343
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 LWSDKVPV 8
+WS VP+
Sbjct: 2584 MWSPIVPI 2591
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 LWSDKVPVL 9
+W + PVL
Sbjct: 45 VWEEAAPVL 53
170|SequenceR|855|846|VSEKLLWSDK
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2150 ISEKTIWS 2157
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2150 ISEKTIWS 2157
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2150 ISEKTIWS 2157
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2150 ISEKTIWS 2157
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2148 ISEKTIWS 2155
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2150 ISEKTIWS 2157
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 2150 ISEKTIWS 2157
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
+SEK +WS
Sbjct: 1984 ISEKTIWS 1991
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 SEKLLWS 8
++KLLW+
Sbjct: 50 TQKLLWA 56
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
++EK +WS
Sbjct: 2151 IAEKTIWS 2158
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSEKLLWS 8
++EK +WS
Sbjct: 2151 IAEKTIWS 2158
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 SEKLLWS 8
++KLLW+
Sbjct: 50 TQKLLWA 56
>sp|PHOSP_HMPVC|PHOSPHOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 KLLWSDK 10
KL W+DK
Sbjct: 68 KLAWTDK 74
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 3 EKLLWS 8
E+L+WS
Sbjct: 97 ERLVWS 102
171|SequenceR|860|851|LDETSVSEKL
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LDETSVSE 8
LDE+++SE
Sbjct: 3113 LDESAISE 3120
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 LDETSVSEKL 10
LD+T EKL
Sbjct: 213 LDDTFFPEKL 222
>sp|CAP6_ADE12|PRE-PROTEIN VI|Human adenovirus A serotype 12
Query: 2 DETSVSEKL 10
DE V EKL
Sbjct: 112 DEVMVEEKL 120
172|SequenceR|865|856|PSPPSLDETS
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSPPSL 6
PSPP L
Sbjct: 234 PSPPKL 239
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSPPSL 6
PSPP L
Sbjct: 234 PSPPKL 239
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 PPSLDET 9
PP LDET
Sbjct: 1939 PPKLDET 1945
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 PPSLDET 9
PPS DET
Sbjct: 1606 PPSWDET 1612
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 PPSLDET 9
PPS DET
Sbjct: 1607 PPSWDET 1613
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PSPPSLD 7
P PPSL+
Sbjct: 110 PPPPSLN 116
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PSPPSLD 7
P PPSL+
Sbjct: 110 PPPPSLN 116
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 1 PSPPSLDET 9
P PP+LD T
Sbjct: 6 PDPPALDTT 14
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSPPSLDET 9
P PP+LD+
Sbjct: 6 PGPPALDDN 14
>sp|UL32_HHV6Z|PACKAGING protein UL32 homolog|Human herpesvirus 6B (strain Z29)
Query: 1 PSPPSLDETS 10
P PP ET+
Sbjct: 28 PQPPIPSETT 37
>sp|UL32_HHV6U|PACKAGING protein UL32|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PSPPSLDETS 10
P PP ET+
Sbjct: 28 PQPPIPSETT 37
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 PPSLDE 8
PP+LDE
Sbjct: 1906 PPALDE 1911
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 PPSLDE 8
PP+LDE
Sbjct: 575 PPALDE 580
>sp|UNG_EBVB9|URACIL-DNA glycosylase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSPPSL 6
P PPSL
Sbjct: 110 PVPPSL 115
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 PSPPSLDET 9
P+P +L+ET
Sbjct: 134 PAPIALEET 142
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 PSPPSLDETS 10
PSP + D TS
Sbjct: 1696 PSPSTADNTS 1705
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PPSLDET 9
PP LDE
Sbjct: 1900 PPKLDEV 1906
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 PPSLDE 8
PP LDE
Sbjct: 1939 PPKLDE 1944
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PPSLDE 8
PP LDE
Sbjct: 1940 PPKLDE 1945
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PPSLDE 8
PP LDE
Sbjct: 1863 PPKLDE 1868
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 PPSLDE 8
PP LDE
Sbjct: 1900 PPKLDE 1905
173|SequenceR|870|861|EKPLPPSPPS
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EKPLPPSP 8
E PL PSP
Sbjct: 216 ETPLQPSP 223
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 1 EKPLPP 6
E PLPP
Sbjct: 31 EDPLPP 36
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 EKPLPP 6
E PLPP
Sbjct: 31 EDPLPP 36
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 4 LPPSPP 9
LPP+PP
Sbjct: 13 LPPTPP 18
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PLPPSP 8
PLPP P
Sbjct: 143 PLPPDP 148
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 4 LPPSPP 9
LPP+PP
Sbjct: 13 LPPTPP 18
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 EKPLPPSPP 9
++PL SPP
Sbjct: 741 KEPLDSSPP 749
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 4 LPPSPP 9
LPP+PP
Sbjct: 13 LPPTPP 18
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 4 LPPSPP 9
LPP+PP
Sbjct: 13 LPPTPP 18
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PLPPSP 8
PLPP P
Sbjct: 143 PLPPDP 148
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EKPLPPSP 8
E PL PSP
Sbjct: 213 ETPLQPSP 220
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PLPPSPPS 10
P+PP+PPS
Sbjct: 1950 PMPPNPPS 1957
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 4 LPPSPP 9
LPP+PP
Sbjct: 13 LPPTPP 18
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 1 EKPLPPSPP 9
++P P PP
Sbjct: 40 DRPQPNQPP 48
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PLPPSPPS 10
P+PP+PPS
Sbjct: 1950 PIPPNPPS 1957
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PLPPSPPS 10
P+PP+PPS
Sbjct: 1950 PIPPNPPS 1957
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PLPPSPPS 10
P+PP+PPS
Sbjct: 1950 PIPPNPPS 1957
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 LPPSPP 9
LPP+PP
Sbjct: 13 LPPTPP 18
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 KPLPPSPP 9
+P P SPP
Sbjct: 386 RPAPGSPP 393
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 PPSPP 9
PP PP
Sbjct: 2864 PPPPP 2868
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 PLPPSPPS 10
P+PP+PPS
Sbjct: 1950 PVPPNPPS 1957
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 PLPPSP 8
P PPSP
Sbjct: 622 PRPPSP 627
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 PLPPSP 8
P PPSP
Sbjct: 626 PPPPSP 631
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 EKPLPPSPP 9
E P+PP P
Sbjct: 1742 ENPIPPPRP 1750
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 KPLPPS 7
+PLPP+
Sbjct: 278 RPLPPA 283
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EKPLPPS 7
E+P PP+
Sbjct: 26 EQPAPPA 32
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EKPLPPS 7
E+P PP+
Sbjct: 26 EQPAPPA 32
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 4 LPPSPPS 10
LPP PP+
Sbjct: 394 LPPVPPN 400
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 4 LPPSPPS 10
LPP PP+
Sbjct: 396 LPPVPPN 402
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EKPLPPS 7
E+P PP+
Sbjct: 26 EQPAPPA 32
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 3 PLPPSPP 9
P+P PP
Sbjct: 627 PIPNGPP 633
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 3 PLPPSPP 9
P PP PP
Sbjct: 632 PHPPLPP 638
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 EKPLPPSPP 9
E P P PP
Sbjct: 1120 ETPSPADPP 1128
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 EKPLPPSPP 9
E P P PP
Sbjct: 1120 ETPSPADPP 1128
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 4 LPPSPPS 10
+PPSPP+
Sbjct: 647 VPPSPPA 653
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 1 EKPLPPSPP 9
+ P P +PP
Sbjct: 250 KDPTPTTPP 258
>sp|PG052_VACCP|PROTEIN OPG052|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 EKPLPPSPPS 10
E+P P +PPS
Sbjct: 18 EQPRPRTPPS 27
>sp|PG052_MONPV|PROTEIN OPG053|Monkeypox virus (MPXV)
Query: 1 EKPLPPSPPS 10
E+P P +PPS
Sbjct: 17 EQPRPRTPPS 26
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 KPLPPSP 8
+P+PPSP
Sbjct: 312 RPVPPSP 318
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 KPLPPSP 8
+P+PPSP
Sbjct: 312 RPVPPSP 318
174|SequenceR|875|866|EERLNEKPLP
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 EERLNEKPL 9
EERLNE+ L
Sbjct: 215 EERLNEQLL 223
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 RLNEKPLP 10
R+N KP P
Sbjct: 6037 RVNAKPPP 6044
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 5 NEKPLP 10
+EKPLP
Sbjct: 1153 DEKPLP 1158
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 EERLNE 6
+ERLNE
Sbjct: 215 DERLNE 220
175|SequenceR|880|871|QDGSAEERLN
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 QDGSAEERL 9
Q GSAE+R+
Sbjct: 281 QHGSAEQRV 289
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 DGSAEERLN 10
DGS E+LN
Sbjct: 555 DGSLSEQLN 563
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 DGSAEER 8
+GS+EER
Sbjct: 140 NGSSEER 146
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 3 GSAEERL 9
G+AEE+L
Sbjct: 310 GTAEEKL 316
>sp|UL14_HCMVA|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QDGSAEERLN 10
+DG A +RL+
Sbjct: 116 EDGGAAQRLS 125
>sp|UL14_HCMVM|UNCHARACTERIZED protein UL14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QDGSAEERLN 10
+DG A +RL+
Sbjct: 116 EDGGAAQRLS 125
176|SequenceR|885|876|TNLLKQDGSA
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 1 TNLLKQDGS 9
T LL++DGS
Sbjct: 145 TPLLREDGS 153
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TNLLKQDGS 9
TNL +DGS
Sbjct: 189 TNLQHRDGS 197
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TNLLKQDGS 9
T +LK DG+
Sbjct: 4174 TKILKDDGN 4182
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TNLLKQDGS 9
T +LK DG+
Sbjct: 4174 TKILKDDGN 4182
177|SequenceR|890|881|KNGEGTNLLK
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 KNGEGTNLL 9
K+GEG N+L
Sbjct: 3071 KSGEGFNIL 3079
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 KNGEGTNLL 9
K+GEG N+L
Sbjct: 3071 KSGEGFNIL 3079
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 KNGEGTNLLK 10
K G+GT +++
Sbjct: 121 KEGDGTTVIR 130
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 KNGEGTNLLK 10
K G+GT +++
Sbjct: 121 KEGDGTTVIR 130
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 3 GEGTNLLK 10
GEG L+K
Sbjct: 184 GEGDKLMK 191
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 KNGEGTNLL 9
KNG GT +
Sbjct: 152 KNGGGTQVF 160
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KNGEGTNLL 9
KNG GT +
Sbjct: 152 KNGGGTQVF 160
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 KNGEGTNLL 9
KNG GT +
Sbjct: 152 KNGGGTQVF 160
178|SequenceR|895|886|QLPAEKNGEG
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 3 PAEKNGEG 10
PAE+ G+G
Sbjct: 143 PAEQGGQG 150
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 2 LPAEKNG 8
LPAE NG
Sbjct: 176 LPAEVNG 182
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 PAEKNGEG 10
P EKN +G
Sbjct: 1379 PIEKNAQG 1386
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PAEKNGEG 10
P E NG G
Sbjct: 1217 PGELNGHG 1224
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 6 KNGEG 10
KNGEG
Sbjct: 361 KNGEG 365
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 KNGEG 10
KNGEG
Sbjct: 361 KNGEG 365
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 PAEKNGE 9
P EK GE
Sbjct: 218 PGEKGGE 224
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 PAEKNGE 9
P EK GE
Sbjct: 218 PGEKGGE 224
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 3 PAEKNGEG 10
++KNGEG
Sbjct: 217 ASQKNGEG 224
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 PAEKNGEG 10
++KNGEG
Sbjct: 217 ASQKNGEG 224
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 LPAEKNGEG 10
LPA + G G
Sbjct: 62 LPARRPGNG 70
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 4 AEKNGEG 10
++KNGEG
Sbjct: 218 SQKNGEG 224
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 4 AEKNGEG 10
++KNGEG
Sbjct: 218 SQKNGEG 224
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 4 AEKNGEG 10
++KNGEG
Sbjct: 218 SQKNGEG 224
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 4 AEKNGEG 10
++KNGEG
Sbjct: 218 SQKNGEG 224
179|SequenceR|900|891|EAGVKQLPAE
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 3 GVKQLPAE 10
GVKQLP +
Sbjct: 396 GVKQLPEQ 403
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GVKQLP 8
G+KQLP
Sbjct: 828 GLKQLP 833
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GVKQLP 8
G+KQLP
Sbjct: 828 GLKQLP 833
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 AGVKQLPA 9
G+K+LPA
Sbjct: 28 GGLKRLPA 35
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate
Query: 2 AGVKQLPA 9
G+K+LPA
Sbjct: 28 GGLKRLPA 35
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 AGVKQLPA 9
G+K+LPA
Sbjct: 28 GGLKRLPA 35
180|SequenceR|905|896|SEDAEEAGVK
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EDAEEAGVK 10
+DA EAG+K
Sbjct: 43 KDAREAGIK 51
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EDAEEAGVK 10
+DA EAG+K
Sbjct: 43 KDAREAGIK 51
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EDAEEAGVK 10
+DA EAG+K
Sbjct: 43 KDAREAGIK 51
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1005 DDAMEQGVK 1013
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1004 DDAMEQGVK 1012
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1006 DDAMEQGVK 1014
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 996 DDAMEQGVK 1004
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 996 DDAMEQGVK 1004
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1012 DDAMEQGVK 1020
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 994 DDAMEQGVK 1002
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 995 DDAMEQGVK 1003
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 996 DDAMEQGVK 1004
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 994 DDAMEQGVK 1002
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 998 DDAMEQGVK 1006
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 993 DDAMEQGVK 1001
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1007 DDAMEQGVK 1015
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1004 DDAMEQGVK 1012
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1002 DDAMEQGVK 1010
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 EDAEEAGVK 10
+DA E GVK
Sbjct: 1014 DDAMEQGVK 1022
181|SequenceR|910|901|ALGPLSEDAE
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 GPLSEDAE 10
GPL+ED +
Sbjct: 673 GPLTEDPD 680
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 ALGPLSEDAE 10
AL PLS D E
Sbjct: 509 ALPPLSADVE 518
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 ALGPLSEDA 9
A PLSEDA
Sbjct: 9 AAAPLSEDA 17
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 LGPLSEDAE 10
+GP SE+A+
Sbjct: 1647 MGPYSEEAK 1655
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 GPLSEDA 9
GPL +DA
Sbjct: 2778 GPLDKDA 2784
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 GPLSEDA 9
GP+SE+A
Sbjct: 220 GPVSEEA 226
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 GPLSEDA 9
GP+SE+A
Sbjct: 220 GPVSEEA 226
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 ALGPLS 6
ALGP+S
Sbjct: 60 ALGPMS 65
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 ALGPLSEDAE 10
AL PL+ D E
Sbjct: 509 ALPPLAADVE 518
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 GPLSED 8
GP SED
Sbjct: 1975 GPTSED 1980
182|SequenceR|915|906|ENINAALGPL
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 NAALGPL 10
NAALGP+
Sbjct: 2915 NAALGPV 2921
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2458 SAALGPL 2464
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2457 SAALGPL 2463
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2458 SAALGPL 2464
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2457 SAALGPL 2463
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2457 SAALGPL 2463
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2458 SAALGPL 2464
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2457 SAALGPL 2463
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2457 SAALGPL 2463
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 NAALGPL 10
+AALGPL
Sbjct: 2457 SAALGPL 2463
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 ENINAALGPL 10
+++NAALG L
Sbjct: 498 DDLNAALGDL 507
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 AALGPL 10
AALGPL
Sbjct: 900 AALGPL 905
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 INAALGP 9
++AALGP
Sbjct: 1796 VDAALGP 1802
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 ENINAALGPL 10
EN+ LGP
Sbjct: 323 ENLKLKLGPF 332
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 ENINAALGPL 10
EN+ LGP
Sbjct: 323 ENLKLKLGPF 332
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 ENINAALGPL 10
+NI A GP+
Sbjct: 1987 DNITTARGPV 1996
183|SequenceR|920|911|SIHTSENINA
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IHTSENINA 10
IH SEN++A
Sbjct: 748 IHNSENVDA 756
>sp|HEMA_CWPXG|PROTEIN OPG185|Cowpox virus (strain GRI-90 /
Query: 3 HTSENINA 10
+TSENIN
Sbjct: 186 YTSENINT 193
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 IHTSENINA 10
+HTS+N+ +
Sbjct: 287 LHTSDNLKS 295
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 2 IHTSEN 7
IHT EN
Sbjct: 148 IHTGEN 153
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IHTSEN 7
IHT EN
Sbjct: 148 IHTGEN 153
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IHTSEN 7
IHT EN
Sbjct: 148 IHTGEN 153
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 HTSENIN 9
HT EN N
Sbjct: 1325 HTPENTN 1331
184|SequenceR|925|916|NQGSSSIHTS
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 NQGSSSIHT 9
NQG+ ++H+
Sbjct: 565 NQGAPTVHS 573
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QGSSSIHTS 10
QGS++IH S
Sbjct: 1162 QGSATIHFS 1170
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QGSSSIHTS 10
QGS++IH S
Sbjct: 1161 QGSATIHFS 1169
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QGSSSIHTS 10
QGS++IH S
Sbjct: 1162 QGSATIHFS 1170
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QGSSSIHTS 10
QGS++IH S
Sbjct: 1161 QGSATIHFS 1169
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QGSSSIHTS 10
QGS++IH S
Sbjct: 1161 QGSATIHFS 1169
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 QGSSSIH 8
+GSS+IH
Sbjct: 6699 KGSSTIH 6705
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 NQGSSSIHTS 10
N GS ++H S
Sbjct: 1134 NPGSVTVHDS 1143
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 QGSSSIHTS 10
QGS +IH S
Sbjct: 1161 QGSVTIHFS 1169
185|SequenceR|930|921|EPTNLNQGSS
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 EPTNLNQG 8
+PTN+ QG
Sbjct: 176 KPTNVQQG 183
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 1 EPTNLN 6
EP NLN
Sbjct: 177 EPLNLN 182
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 2 PTNLNQ 7
PTNLN+
Sbjct: 253 PTNLNK 258
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PTNLNQ 7
PTNLN+
Sbjct: 253 PTNLNK 258
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 EPTNLNQ 7
EP LNQ
Sbjct: 1921 EPARLNQ 1927
186|SequenceR|935|926|NLTEGEPTNL
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 NLTEGEPTNL 10
N T G+P NL
Sbjct: 649 NFTRGDPCNL 658
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 1 NLTEGEPTNL 10
N+T GEP N+
Sbjct: 261 NVTIGEPANI 270
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 1 NLTEGEPTNL 10
N+T GEP N+
Sbjct: 261 NVTIGEPANI 270
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 NLTEGEPTNL 10
N+T GEP N+
Sbjct: 263 NVTIGEPANI 272
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 NLTEGEPTNL 10
NLT+GE N+
Sbjct: 715 NLTKGEKANV 724
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 NLTEGEPTNL 10
NLT+GE N+
Sbjct: 715 NLTKGEKANV 724
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 NLTEGEPTNL 10
NLT+GE N+
Sbjct: 715 NLTKGEKANV 724
>sp|VP7_ROTHL|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 LTEGEPTN 9
LT+G PTN
Sbjct: 107 LTKGWPTN 114
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TEGEPT 8
T+GEPT
Sbjct: 76 TQGEPT 81
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NLTEGEPTNL 10
N+ G PTN+
Sbjct: 2556 NVVPGVPTNV 2565
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 NLTEGEPTNL 10
N+ G PTN+
Sbjct: 2556 NVVPGVPTNV 2565
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 TEGEPTNL 10
T GEP L
Sbjct: 1932 TSGEPATL 1939
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TEGEPT 8
T+GEPT
Sbjct: 356 TQGEPT 361
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 TEGEPT 8
T+GEPT
Sbjct: 356 TQGEPT 361
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 NLTEGE 6
N TEGE
Sbjct: 2083 NFTEGE 2088
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 NLTEGE 6
N TEGE
Sbjct: 2083 NFTEGE 2088
187|SequenceR|940|931|TQHKGNLTEG
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 QHKGNLTEG 10
QH+GN+ G
Sbjct: 40 QHRGNIKFG 48
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 TQHKGNLTE 9
T H+G LT+
Sbjct: 1731 TTHQGKLTD 1739
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 GNLTEG 10
GN+TEG
Sbjct: 399 GNITEG 404
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 2 QHKGNL 7
QHKG L
Sbjct: 130 QHKGTL 135
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 5 GNLTEG 10
GN+TEG
Sbjct: 119 GNITEG 124
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 5 GNLTEG 10
GN+TEG
Sbjct: 119 GNITEG 124
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 GNLTEG 10
GNLT+G
Sbjct: 34 GNLTDG 39
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 5 GNLTEG 10
GN+TEG
Sbjct: 119 GNITEG 124
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 5 GNLTEG 10
GN+TEG
Sbjct: 119 GNITEG 124
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 QHKGN 6
QH+GN
Sbjct: 808 QHRGN 812
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 QHKGN 6
QH+GN
Sbjct: 808 QHRGN 812
188|SequenceR|945|936|CVISDTQHKG
>sp|UL58_HCMVA|UNCHARACTERIZED protein UL58|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CVISDTQH 8
CVIS +QH
Sbjct: 56 CVISTSQH 63
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CVISDTQHKG 10
C+IS H G
Sbjct: 128 CIISGKNHNG 137
>sp|M1_I96A3|MATRIX protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 ISDTQHK 9
I+D+QHK
Sbjct: 154 IADSQHK 160
>sp|M1_I96A2|MATRIX protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 ISDTQHK 9
I+D+QHK
Sbjct: 154 IADSQHK 160
>sp|M1_I83A1|MATRIX protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 3 ISDTQHK 9
I+D+QHK
Sbjct: 154 IADSQHK 160
>sp|M1_I80AA|MATRIX protein 1|Influenza A virus (strain A/India/6263/1980
Query: 3 ISDTQHK 9
I+D+QHK
Sbjct: 154 IADSQHK 160
>sp|M1_I07A0|MATRIX protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 ISDTQHK 9
I+D+QHK
Sbjct: 151 IADSQHK 157
>sp|M1_I00A1|MATRIX protein 1|Influenza A virus (strain A/New
Query: 3 ISDTQHK 9
I+D+QHK
Sbjct: 154 IADSQHK 160
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 CVISDTQHKG 10
C+IS H G
Sbjct: 128 CIISGKNHDG 137
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CVISDTQHKG 10
C+IS H G
Sbjct: 128 CIISGKNHDG 137
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 VISDTQ 7
VISDTQ
Sbjct: 2181 VISDTQ 2186
>sp|M1_I96A0|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I89A2|MATRIX protein 1|Influenza A virus (strain A/Beijing/353/1989
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I88A7|MATRIX protein 1|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I88A5|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I88A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/8/1988
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I85A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Netherlands/12/1985
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I85A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I83A8|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I82A9|MATRIX protein 1|Influenza A virus (strain A/Philippines/2/1982
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I82A7|MATRIX protein 1|Influenza A virus (strain A/Swine/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I81A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I80A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I80A2|MATRIX protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I79A0|MATRIX protein 1|Influenza A virus (strain A/Bangkok/1/1979
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I78A8|MATRIX protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I78A7|MATRIX protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I78A3|MATRIX protein 1|Influenza A virus (strain A/Mallard/New
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I77AC|MATRIX protein 1|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I77AB|MATRIX protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I77AA|MATRIX protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I77A9|MATRIX protein 1|Influenza A virus (strain A/Equine/New
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I77A4|MATRIX protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I76A6|MATRIX protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I75A0|MATRIX protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I73A5|MATRIX protein 1|Influenza A virus (strain A/Port
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I72A8|MATRIX protein 1|Influenza A virus (strain A/Udorn/1972
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I72A4|MATRIX protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I72A3|MATRIX protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I72A2|MATRIX protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I71A1|MATRIX protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I70A0|MATRIX protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I69A0|MATRIX protein 1|Influenza A virus (strain A/England/878/1969
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I68A6|MATRIX protein 1|Influenza A virus (strain A/Northern
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I68A5|MATRIX protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I68A4|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I67A2|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I67A0|MATRIX protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I60A0|MATRIX protein 1|Influenza A virus (strain A/Ann
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I59A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I57A5|MATRIX protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I57A3|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I57A2|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I57A1|MATRIX protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I57A0|MATRIX protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I56A3|MATRIX protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I54A2|MATRIX protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I51A0|MATRIX protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I50A0|MATRIX protein 1|Influenza A virus (strain A/Fort
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I45A0|MATRIX protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I43A0|MATRIX protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I40A0|MATRIX protein 1|Influenza A virus (strain A/Hickox/1940
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I37A0|MATRIX protein 1|Influenza A virus (strain A/Swine/29/1937
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I36A0|MATRIX protein 1|Influenza A virus (strain A/Henry/1936
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I35A3|MATRIX protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I34A1|MATRIX protein 1|Influenza A virus (strain A/Puerto
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I33A0|MATRIX protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I30A0|MATRIX protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I18A0|MATRIX protein 1|Influenza A virus (strain A/Brevig
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I06A0|MATRIX protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I05A1|MATRIX protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I03A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I03A0|MATRIX protein 1|Influenza A virus (strain A/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I02A7|MATRIX protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 152 IADSQHR 158
>sp|M1_I02A6|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I02A5|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I02A4|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I02A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I02A1|MATRIX protein 1|Influenza A virus (strain A/Guinea
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 147 IADSQHR 153
>sp|M1_I02A0|MATRIX protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I01A3|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I01A2|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I01A1|MATRIX protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I01A0|MATRIX protein 1|Influenza A virus (strain A/Silky
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I00A0|MATRIX protein 1|Influenza A virus (strain A/Duck/Hong
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I000X|MATRIX protein 1|Influenza A virus (strain A/X-31
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|M1_I000F|MATRIX protein 1|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 ISDTQHK 9
I+D+QH+
Sbjct: 154 IADSQHR 160
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 CVISDTQHKG 10
C + QH+G
Sbjct: 34 CYVETFQHRG 43
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 CVISDTQHKG 10
C ++DT G
Sbjct: 580 CTVADTMRTG 589
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 CVISDTQHKG 10
C+ +D+Q +G
Sbjct: 632 CIYNDSQLEG 641
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 CVISDTQHKG 10
C+ +D+Q +G
Sbjct: 632 CIYNDSQLEG 641
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 CVISDTQHKG 10
C+ +D+Q +G
Sbjct: 632 CIYNDSQLEG 641
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ISDTQH 8
+S+TQH
Sbjct: 590 VSETQH 595
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ISDTQH 8
+S+TQH
Sbjct: 590 VSETQH 595
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ISDTQH 8
+S+TQH
Sbjct: 590 VSETQH 595
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ISDTQH 8
+S+TQH
Sbjct: 590 VSETQH 595
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 ISDTQH 8
+S+TQH
Sbjct: 590 VSETQH 595
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 3 ISDTQH 8
+SD+QH
Sbjct: 95 VSDSQH 100
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 2 VISDTQHKG 10
V D QH+G
Sbjct: 149 VPGDAQHEG 157
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 VISDTQH 8
+I+DT H
Sbjct: 131 IINDTSH 137
189|SequenceR|950|941|DMKMECVISD
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 DMKMECVISD 10
D+K+ECV D
Sbjct: 575 DIKLECVRRD 584
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 DMKMEC 6
DMK+EC
Sbjct: 24 DMKIEC 29
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 DMKMEC 6
DMK+EC
Sbjct: 24 DMKIEC 29
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 DMKMEC 6
DMK+EC
Sbjct: 24 DMKIEC 29
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 DMKMEC 6
DMK+EC
Sbjct: 24 DMKIEC 29
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 DMKMECVISD 10
D++++C +SD
Sbjct: 273 DIEVDCDVSD 282
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 DMKMECVISD 10
D++++C +SD
Sbjct: 273 DIEVDCDVSD 282
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 ECVISD 10
ECV+SD
Sbjct: 119 ECVLSD 124
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 DMKMECVISD 10
D K+ CV D
Sbjct: 284 DQKVSCVCRD 293
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 3 KMECVI 8
+MECV+
Sbjct: 37 RMECVL 42
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 DMKMEC 6
++KMEC
Sbjct: 29 ELKMEC 34
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 DMKMECVIS 9
D K++C +S
Sbjct: 548 DFKVQCYMS 556
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 DMKMEC 6
++KMEC
Sbjct: 29 ELKMEC 34
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 DMKMEC 6
++KMEC
Sbjct: 25 ELKMEC 30
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 ECVISD 10
+CV+SD
Sbjct: 265 DCVLSD 270
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 ECVISD 10
+CV+SD
Sbjct: 271 DCVLSD 276
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 DMKMEC 6
++KMEC
Sbjct: 29 ELKMEC 34
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 DMKMEC 6
++KMEC
Sbjct: 29 ELKMEC 34
190|SequenceR|955|946|TNQDTDMKME
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 4 DTDMKME 10
D+D+KME
Sbjct: 413 DSDIKME 419
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 NQDTDMKME 10
+Q TD+K+E
Sbjct: 53 DQVTDLKIE 61
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 TNQDTD 6
TNQD D
Sbjct: 411 TNQDAD 416
191|SequenceR|960|951|TLNERTNQDT
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 LNERTNQD 9
LN+R N+D
Sbjct: 113 LNQRENRD 120
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 LNERTNQ 8
+NE+TNQ
Sbjct: 29 VNEKTNQ 35
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 1 TLNERTNQDT 10
TLN R + DT
Sbjct: 139 TLNNRHSNDT 148
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 1 TLNERTNQDT 10
TLN R + DT
Sbjct: 139 TLNNRHSNDT 148
192|SequenceR|965|956|TSNIGTLNER
>sp|FUS_PI1HC|FUSION glycoprotein F0|Human parainfluenza 1 virus (strain
Query: 1 TSNIGTLNER 10
+SN+GT+ E+
Sbjct: 218 SSNLGTIGEK 227
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 TSNIGTLN 8
T N+GT N
Sbjct: 538 TGNVGTTN 545
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 TSNIGTLN 8
T N+GT N
Sbjct: 538 TGNVGTTN 545
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 5 GTLNER 10
GTLNE+
Sbjct: 2073 GTLNEK 2078
193|SequenceR|970|961|VPEEVTSNIG
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 VPEEVTSNIG 10
+P++++SN G
Sbjct: 82 IPKKISSNFG 91
>sp|M1_INBYA|MATRIX protein 1|Influenza B virus (strain B/Yamagata/1/1973)
Query: 3 EEVTSNIG 10
EE+ SNIG
Sbjct: 203 EELQSNIG 210
>sp|M1_INBSI|MATRIX protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 EEVTSNIG 10
EE+ SNIG
Sbjct: 203 EELQSNIG 210
>sp|M1_INBMP|MATRIX protein 1|Influenza B virus (strain B/Memphis/12/1997)
Query: 3 EEVTSNIG 10
EE+ SNIG
Sbjct: 203 EELQSNIG 210
>sp|M1_INBAD|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 EEVTSNIG 10
EE+ SNIG
Sbjct: 203 EELQSNIG 210
>sp|M1_INBAC|MATRIX protein 1|Influenza B virus (strain B/Ann
Query: 3 EEVTSNIG 10
EE+ SNIG
Sbjct: 203 EELQSNIG 210
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 1 VPEEVTSNIG 10
+P+ +TS +G
Sbjct: 362 IPQSITSTLG 371
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 VPEEVTSNIG 10
+P+ +TS +G
Sbjct: 355 IPQSITSTLG 364
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 PEEVTSNI 9
PEE SNI
Sbjct: 1777 PEESRSNI 1784
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 PEEVTSNI 9
PEE SNI
Sbjct: 1777 PEESRSNI 1784
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 PEEVTSNIG 10
PE SN+G
Sbjct: 486 PESTQSNLG 494
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 PEEVTS 7
PEE+TS
Sbjct: 18 PEEITS 23
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 PEEVTS 7
PEE+TS
Sbjct: 18 PEEITS 23
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 PEEVTS 7
PEE+TS
Sbjct: 18 PEEITS 23
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 1 VPEEVT 6
VP+EVT
Sbjct: 245 VPDEVT 250
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 3 EEVTSNIG 10
EE+ +NIG
Sbjct: 203 EELQNNIG 210
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 2 PEEVTSN 8
PEEVT +
Sbjct: 142 PEEVTGD 148
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 2 PEEVTSN 8
PEEVT +
Sbjct: 142 PEEVTGD 148
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PEEVTSN 8
P EVT N
Sbjct: 68 PREVTEN 74
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PEEVTSN 8
P EVT N
Sbjct: 68 PREVTEN 74
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VPEEVTSN 8
+P+E TSN
Sbjct: 472 LPQESTSN 479
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PEEVTSNI 9
P+E+ SN+
Sbjct: 1016 PDEILSNV 1023
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 5 VTSNIG 10
VTSN+G
Sbjct: 242 VTSNLG 247
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 EEVTSNIG 10
EEVT +IG
Sbjct: 2143 EEVTFSIG 2150
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 3 EEVTSNI 9
EEV SNI
Sbjct: 147 EEVDSNI 153
194|SequenceR|975|966|PLMPSVPEEV
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 LMPSVPEEV 10
MP++PE V
Sbjct: 899 FMPTLPENV 907
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 2 LMPSVPEEV 10
MP++PE V
Sbjct: 899 FMPTLPENV 907
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 LMPSVPEEV 10
MP++PE V
Sbjct: 899 FMPTLPENV 907
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 2 LMPSVPEEV 10
MP++PE V
Sbjct: 899 FMPTLPENV 907
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LMPSVPEE 9
L PSVP E
Sbjct: 327 LQPSVPRE 334
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 2 LMPSVPEEV 10
MP++PE V
Sbjct: 899 FMPNLPENV 907
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLMPSVPEEV 10
P MP+V EE+
Sbjct: 2672 PYMPTVIEEL 2681
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLMPSVPEEV 10
P MP+V EE+
Sbjct: 2672 PYMPTVIEEL 2681
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 PLMPSVPE 8
P++PS PE
Sbjct: 245 PMVPSKPE 252
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PLMPSVPE 8
P++PS PE
Sbjct: 245 PMVPSKPE 252
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLMPSVPEEV 10
P MP+V EE+
Sbjct: 2672 PYMPTVIEEL 2681
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLMPSVPEEV 10
P MP+V EE+
Sbjct: 2672 PYMPTVIEEL 2681
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 PLMPSVPEEV 10
P MP+V EE+
Sbjct: 2672 PYMPTVIEEL 2681
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 2 LMPSVPEE 9
L PS+P E
Sbjct: 327 LQPSIPRE 334
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLMPSVPEEV 10
P MPSV E++
Sbjct: 2676 PYMPSVIEKM 2685
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 LMPSVPEEV 10
L PSVP+E+
Sbjct: 259 LQPSVPQEL 267
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLMPSVPEEV 10
P MPSV E++
Sbjct: 2676 PYMPSVIEKM 2685
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 PLMPSVPEEV 10
P MPSV E++
Sbjct: 2676 PYMPSVIEKM 2685
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLMPSVPEEV 10
P MPSV E++
Sbjct: 2676 PYMPSVIEKM 2685
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLMPSVPEEV 10
P MPSV E++
Sbjct: 2676 PYMPSVIEKM 2685
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PLMPSVPE 8
P MPSV E
Sbjct: 2677 PYMPSVVE 2684
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PLMPSVPE 8
P MPSV E
Sbjct: 2676 PYMPSVVE 2683
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 PLMPSVPE 8
P MPSV E
Sbjct: 2677 PYMPSVVE 2684
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 2 LMPSVPEE 9
L PSVP+E
Sbjct: 309 LQPSVPQE 316
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLMPSVPEEV 10
P MPSV E +
Sbjct: 2676 PYMPSVIERM 2685
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLMPSVPEEV 10
P MPSV E +
Sbjct: 2673 PYMPSVIERM 2682
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 PLMPSVPEEV 10
P MP+V +E+
Sbjct: 2706 PYMPAVIKEL 2715
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PLMPSVPEEV 10
P MP V E++
Sbjct: 2694 PYMPEVVEKL 2703
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PLMPSVPEE 9
PL+P V +E
Sbjct: 510 PLLPEVDKE 518
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 2 LMPSVPEE 9
L P+ PEE
Sbjct: 372 LFPNFPEE 379
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 LMPSVP 7
LMPS+P
Sbjct: 2003 LMPSLP 2008
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 PLMPSVPE 8
PL+ +VPE
Sbjct: 286 PLIMNVPE 293
>sp|E1BS_ADE07|E1B protein, small T-antigen|Human adenovirus B serotype 7
Query: 1 PLMPSVPEE 9
P MP+V +E
Sbjct: 153 PTMPAVLQE 161
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PLMPSVPEE 9
PL+P V E
Sbjct: 510 PLLPEVERE 518
195|SequenceR|980|971|EVASPPLMPS
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 VASPPLMP 9
V +PPL+P
Sbjct: 1388 VVNPPLLP 1395
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 VASPPLMP 9
V +PPL+P
Sbjct: 1388 VVNPPLLP 1395
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 VASPPLMP 9
V +PPL+P
Sbjct: 1388 VVNPPLLP 1395
>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2
Query: 3 ASPPLMPS 10
ASPP++PS
Sbjct: 40 ASPPIVPS 47
>sp|C13_VACCC|PROTEIN C13|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VASPPL 7
+ASPP+
Sbjct: 17 IASPPI 22
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 EVASPPLMP 9
E PPL+P
Sbjct: 496 ESQEPPLIP 504
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 SPPLMPS 10
+PPL+PS
Sbjct: 2302 NPPLLPS 2308
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 ASPPLMP 9
A PPL+P
Sbjct: 507 ALPPLLP 513
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 4 SPPLMP 9
SPPL+P
Sbjct: 676 SPPLLP 681
>sp|UL133_HCMVM|PROTEIN UL133|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ASPPLMP 9
ASPP MP
Sbjct: 219 ASPPAMP 225
196|SequenceR|985|976|VAEREEVASP
>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain
Query: 2 AEREEVASP 10
A REE+AS
Sbjct: 175 ASREEIASA 183
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VAEREEVASP 10
VAE E+V P
Sbjct: 57 VAEGEQVTIP 66
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 1 VAEREEVAS 9
VAER+E +S
Sbjct: 522 VAERQEPSS 530
197|SequenceR|990|981|LATKSVAERE
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 3 TKSVAERE 10
TKS +ERE
Sbjct: 711 TKSTSERE 718
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 TKSVAERE 10
TKS ERE
Sbjct: 711 TKSTPERE 718
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 1 LATKSVAER 9
+ATKSV+ R
Sbjct: 310 MATKSVSFR 318
198|SequenceR|995|986|APPSALATKS
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1698 PPSALET 1704
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1698 PPSALET 1704
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 PPSALAT 8
PPSAL T
Sbjct: 1709 PPSALET 1715
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 APPSALATKS 10
APP TKS
Sbjct: 1106 APPLRFVTKS 1115
199|SequenceR|1000|991|NAAMTAPPSA
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 1 NAAMTAPPSA 10
AA+TAPPS+
Sbjct: 110 QAALTAPPSS 119
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 2 AAMTAPPSA 10
AA TAPPSA
Sbjct: 279 AARTAPPSA 287
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 3 AMTAPPS 9
AMT+PPS
Sbjct: 112 AMTSPPS 118
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 2 AAMTAP 7
AAMTAP
Sbjct: 503 AAMTAP 508
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 2 AAMTAPPSA 10
+A++APPS+
Sbjct: 135 SAISAPPSS 143
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 NAAMTAPPSA 10
N +T PPSA
Sbjct: 402 NIGVTPPPSA 411
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 NAAMTAPPSA 10
N +T PPSA
Sbjct: 404 NFGLTLPPSA 413
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 NAAMTAPPSA 10
N +T PPSA
Sbjct: 403 NFGLTLPPSA 412
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 NAAMTAPPSA 10
+ MT PPS
Sbjct: 151 DQKMTTPPST 160
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 122 TAPPSG 127
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 AMTAPPSA 10
+T PPSA
Sbjct: 435 GLTPPPSA 442
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 122 TAPPSG 127
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 NAAMTAPPS 9
N +T PPS
Sbjct: 431 NFGLTLPPS 439
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 NAAMTAPPSA 10
N +T PPS
Sbjct: 428 NFGLTPPPSG 437
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 TAPPSA 10
TAPPS
Sbjct: 125 TAPPSG 130
200|SequenceR|1005|996|IEQSENAAMT
>sp|VE6_HPV24|PROTEIN E6|Human papillomavirus 24
Query: 1 IEQSENAAMT 10
IEQ EN ++
Sbjct: 86 IEQKENTPLS 95
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 IEQSENAAMT 10
IE+ N AMT
Sbjct: 2824 IEEVTNMAMT 2833
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 1 IEQSENA 7
IEQ ENA
Sbjct: 135 IEQVENA 141
201|SequenceR|1010|1001|GEDEDIEQSE
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GEDEDIEQS 9
GED D+EQS
Sbjct: 285 GEDHDMEQS 293
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 GEDEDIEQS 9
GED DIE++
Sbjct: 289 GEDHDIEKN 297
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 GEDEDIEQS 9
GED DIE++
Sbjct: 289 GEDHDIEKN 297
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 GEDEDIEQS 9
GED DIE++
Sbjct: 289 GEDHDIEKN 297
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GEDEDIEQS 9
GED DIE++
Sbjct: 289 GEDHDIEKN 297
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 4 EDIEQSE 10
ED+EQ+E
Sbjct: 637 EDVEQAE 643
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 EDEDIEQS 9
+ EDIEQS
Sbjct: 554 DTEDIEQS 561
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 EDEDIEQS 9
+DED+E S
Sbjct: 123 KDEDVENS 130
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 EDEDIEQS 9
EDE+IE S
Sbjct: 621 EDEEIETS 628
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 EDEDIEQS 9
+DED+E S
Sbjct: 123 KDEDVENS 130
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 GEDEDIE 7
GED DI+
Sbjct: 284 GEDHDID 290
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 GEDEDIEQSE 10
G +ED ++SE
Sbjct: 527 GREEDAQESE 536
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 EDEDIEQS 9
EDE ++QS
Sbjct: 246 EDEGLQQS 253
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 EDEDIEQS 9
+ EDIEQ+
Sbjct: 554 DTEDIEQT 561
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 4 EDIEQSE 10
ED+EQ++
Sbjct: 637 EDVEQTQ 643
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 EDIEQSE 10
+D+E+SE
Sbjct: 1028 DDVEESE 1034
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 EDIEQSE 10
+D+E+SE
Sbjct: 1028 DDVEESE 1034
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 EDIEQSE 10
+D+E+SE
Sbjct: 1028 DDVEESE 1034
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 EDIEQSE 10
+D+E+SE
Sbjct: 1028 DDVEESE 1034
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GEDEDIE 7
GE+ D+E
Sbjct: 2390 GEESDVE 2396
202|SequenceR|1015|1006|EHSHIGEDED
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 EHSHIGEDE 9
EH H+GE E
Sbjct: 62 EHGHLGEHE 70
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 HSHIGED 8
H+H GED
Sbjct: 332 HNHAGED 338
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 2 HSHIGEDED 10
H H+G+D D
Sbjct: 394 HFHLGDDMD 402
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 1 EHSHIGEDED 10
+H H+G+D D
Sbjct: 398 DHFHLGDDMD 407
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 EHSHIGEDED 10
+H H+G+D D
Sbjct: 398 DHFHLGDDMD 407
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 1 EHSHIGEDED 10
+H H+G+D D
Sbjct: 398 DHFHLGDDMD 407
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 1 EHSHIGEDED 10
+H H+G+D D
Sbjct: 398 DHFHLGDDMD 407
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 2 HSHIGEDED 10
H H+G+D D
Sbjct: 394 HFHLGDDMD 402
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 EHSHIGEDED 10
+H H+G+D D
Sbjct: 398 DHFHLGDDMD 407
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 EHSHIGEDED 10
+H H+G+D D
Sbjct: 398 DHFHLGDDMD 407
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 2 HSHIGEDED 10
H H+G+D D
Sbjct: 394 HFHLGDDMD 402
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 HSHIGEDE 9
+ H+G+DE
Sbjct: 502 YEHVGQDE 509
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 2 HSHIGEDED 10
H H+G+D D
Sbjct: 395 HFHLGDDMD 403
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 2 HSHIGEDE 9
H H G DE
Sbjct: 55 HGHDGSDE 62
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 EHSHIGED 8
E +H+ ED
Sbjct: 3424 EETHVSED 3431
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 SHIGEDED 10
+H+G+D D
Sbjct: 201 AHVGDDWD 208
>sp|DUT_HCMVM|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 EHSHIGEDE 9
+ H GEDE
Sbjct: 82 KEQHPGEDE 90
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 1 EHSHIGEDE 9
+ H GEDE
Sbjct: 82 KEQHPGEDE 90
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 3 SHIGEDED 10
SHI D+D
Sbjct: 25 SHIKNDDD 32
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 EHSHIGEDED 10
E SH+ ED D
Sbjct: 500 EASHLLEDPD 509
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EHSHIGEDED 10
E SH+ ED D
Sbjct: 500 EASHLLEDPD 509
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 EHSHIGEDED 10
E SH+ ED D
Sbjct: 500 EASHLLEDPD 509
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 HIGEDED 10
H GE+E+
Sbjct: 139 HFGENEE 145
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 HIGEDED 10
H GE+E+
Sbjct: 139 HFGENEE 145
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 HIGEDE 9
H GEDE
Sbjct: 2168 HNGEDE 2173
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 3 SHIGEDED 10
SH+ D+D
Sbjct: 25 SHVKNDDD 32
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 3 SHIGEDED 10
SH+ D+D
Sbjct: 25 SHVKNDDD 32
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SHIGEDED 10
SH+ D+D
Sbjct: 25 SHVKNDDD 32
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SHIGEDED 10
SH+ D+D
Sbjct: 25 SHVKNDDD 32
203|SequenceR|1020|1011|SLDSGEHSHI
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1028 LNQDEHSHI 1036
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQDEHSHI 1042
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQEEHSHI 1042
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LDSGEHSHI 10
L+ EHSHI
Sbjct: 1034 LNQEEHSHI 1042
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 LDSGEHSHI 10
LD+ H+H+
Sbjct: 810 LDTSRHNHL 818
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 DSGEHSH 9
D+G H+H
Sbjct: 1298 DNGNHTH 1304
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 4 SGEHSHI 10
SG H+H+
Sbjct: 558 SGNHAHV 564
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 1 SLDSGEHSH 9
S+ +GE SH
Sbjct: 37 SIQTGEKSH 45
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 1 SLDSGEHSH 9
S+ +GE SH
Sbjct: 37 SIQTGEKSH 45
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 SGEHSHI 10
SG H+H+
Sbjct: 558 SGNHAHV 564
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 4 SGEHSHI 10
SG H+H+
Sbjct: 558 SGNHAHV 564
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 2 LDSGEHSHI 10
LD+ E SH+
Sbjct: 312 LDTAEDSHL 320
>sp|UL96_HHV6Z|PROTEIN U68|Human herpesvirus 6B (strain Z29)
Query: 3 DSGEHSHI 10
D+ EH H+
Sbjct: 49 DNAEHQHV 56
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 GEHSHI 10
GE+SH+
Sbjct: 3072 GEYSHV 3077
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 GEHSHI 10
GE+SH+
Sbjct: 3072 GEYSHV 3077
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DSGEHSH 9
DSG H H
Sbjct: 394 DSGRHEH 400
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 DSGEHSH 9
DSG H H
Sbjct: 463 DSGRHEH 469
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 4 SGEHSHI 10
SG HSH+
Sbjct: 428 SGWHSHL 434
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 SLDSGE 6
SLDSGE
Sbjct: 1584 SLDSGE 1589
204|SequenceR|1025|1016|ESMNDSLDSG
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 NDSLDSG 10
N+SLD+G
Sbjct: 430 NESLDTG 436
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ESMNDSLDSG 10
E + D+LD G
Sbjct: 1006 EVLEDTLDDG 1015
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ESMNDSLDSG 10
E + D+LD G
Sbjct: 1006 EVLEDTLDDG 1015
>sp|NSP4_ROTHV|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 2 SMNDSLDS 9
SMND+L S
Sbjct: 16 SMNDTLHS 23
>sp|NSP4_ROTHT|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 SMNDSLDS 9
SMND+L S
Sbjct: 16 SMNDTLHS 23
>sp|NSP4_ROTHW|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 2 SMNDSLDS 9
SMND+L S
Sbjct: 16 SMNDTLHS 23
>sp|NSP4_ROTHM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 SMNDSLDS 9
SMND+L S
Sbjct: 16 SMNDTLHS 23
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 5 DSLDSG 10
DSLDSG
Sbjct: 1583 DSLDSG 1588
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 2 SMNDSLDS 9
S++DS+DS
Sbjct: 68 SVSDSIDS 75
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 4 NDSLDSG 10
ND LD+G
Sbjct: 121 NDHLDNG 127
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 NDSLDSG 10
ND LD+G
Sbjct: 121 NDHLDNG 127
205|SequenceR|1030|1021|SDDSGESMND
>sp|RL5A_HCMVM|PROTEIN RL5A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DDSGESMND 10
DD GES+ D
Sbjct: 31 DDGGESLYD 39
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DDSGESMND 10
DD GE+ D
Sbjct: 184 DDEGEAEED 192
Query: 2 DDSGESMND 10
DD GE+ D
Sbjct: 195 DDEGEAEED 203
>sp|TEG7_HHV2H|TEGUMENT protein UL51|Human herpesvirus 2 (strain HG52)
Query: 2 DDSGESMND 10
DD+ ES++D
Sbjct: 54 DDALESLDD 62
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 DSGESMND 10
D+G MND
Sbjct: 671 DAGALMND 678
206|SequenceR|1035|1026|AGHLGSDDSG
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HLGSDD 8
HLG+DD
Sbjct: 144 HLGADD 149
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HLGSDD 8
HLG+DD
Sbjct: 144 HLGADD 149
>sp|VE5_HPV5B|PROBABLE protein E5|Human papillomavirus type 5b
Query: 3 HLGSDDSG 10
H+G DSG
Sbjct: 70 HVGRQDSG 77
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 AGHLGSDD 8
+GHL S+D
Sbjct: 52 SGHLTSED 59
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 HLGSDDS 9
++GSDDS
Sbjct: 405 NMGSDDS 411
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 AGHLGSDDS 9
GH DDS
Sbjct: 1981 GGHTNEDDS 1989
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 AGHLGSDDS 9
GH DDS
Sbjct: 1981 GGHTNEDDS 1989
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 AGHLGSDDS 9
GH DDS
Sbjct: 1977 GGHTNEDDS 1985
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 GHLGSDD 8
GHLG+ D
Sbjct: 144 GHLGTVD 150
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 2 GHLGSDDSG 10
H+G DSG
Sbjct: 254 AHIGPVDSG 262
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 2 GHLGSDDSG 10
H+G DSG
Sbjct: 254 AHIGPVDSG 262
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 AGHLGSDDSG 10
GH+ +DD+
Sbjct: 3049 GGHMFADDTA 3058
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 GHLGSDDSG 10
G LGS D+G
Sbjct: 59 GPLGSADAG 67
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 AGHLGSDDSG 10
AGH S D G
Sbjct: 964 AGHSESGDCG 973
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 GHLGSDDSG 10
G LGS D+G
Sbjct: 59 GPLGSADAG 67
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 2 GHLGSDDS 9
GH G+D +
Sbjct: 565 GHYGADQT 572
207|SequenceR|1040|1031|QPVPRAGHLG
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 VPRAGH 8
VPRA H
Sbjct: 1056 VPRAAH 1061
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 VPRAGH 8
VPRA H
Sbjct: 1056 VPRAAH 1061
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 VPRAGH 8
VPRA H
Sbjct: 1056 VPRAAH 1061
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 QPVPRA 6
QP+PRA
Sbjct: 63 QPIPRA 68
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 PVPRAG 7
P PRAG
Sbjct: 5 PSPRAG 10
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PVPRAGH 8
P P AGH
Sbjct: 149 PYPTAGH 155
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 PVPRAGH 8
P P AGH
Sbjct: 149 PYPTAGH 155
>sp|K42_HHV8P|PROTEIN K4.2|Human herpesvirus 8 type P
Query: 1 QPVPRAGHL 9
+PV RAG L
Sbjct: 11 KPVGRAGFL 19
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 4 PRAGHLG 10
PR G+LG
Sbjct: 123 PRGGYLG 129
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 QPVPRA 6
QP+P+A
Sbjct: 63 QPIPKA 68
208|SequenceR|1045|1036|KRSSEQPVPR
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 RSSEQPVPR 10
RS QP+PR
Sbjct: 59 RSRRQPIPR 67
>sp|VIF_HV2RO|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 KRSSEQPVPR 10
+RSSE P PR
Sbjct: 192 QRSSESPTPR 201
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RSSEQPVPR 10
RSSE P+ R
Sbjct: 159 RSSENPLTR 167
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 2 RSSEQPVPR 10
RSSE P+ R
Sbjct: 159 RSSENPLTR 167
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 2 RSSEQPVPR 10
RSSE P+ R
Sbjct: 159 RSSENPLTR 167
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RSSEQPVPR 10
RSSE P+ R
Sbjct: 159 RSSENPLTR 167
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 RSSEQPVPR 10
+S E+PVP+
Sbjct: 1816 KSEEKPVPK 1824
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 3 SSEQPVPR 10
S E P PR
Sbjct: 2 SEENPCPR 9
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 KRSSEQPVPR 10
+R SE P PR
Sbjct: 192 QRGSEPPAPR 201
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|PG144_MONPV|VIRION membrane protein OPG144 precursor|Monkeypox virus (MPXV)
Query: 1 KRSSEQPVP 9
KRS P+P
Sbjct: 166 KRSINVPIP 174
>sp|VE6_HPV27|PROTEIN E6|Human papillomavirus 27
Query: 3 SSEQPVPR 10
S E P PR
Sbjct: 8 SEENPCPR 15
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 3 SSEQPVPR 10
S E P PR
Sbjct: 2 SEENPCPR 9
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 RSSEQPVP 9
R SEQP P
Sbjct: 195 RGSEQPDP 202
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 RSSEQPVP 9
R SEQP P
Sbjct: 194 RGSEQPDP 201
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
>sp|NP_ADE40|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus F serotype 40
Query: 1 KRSSEQPV 8
+RSS+ PV
Sbjct: 26 RRSSQHPV 33
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 2 RSSEQPVPR 10
R QP+P+
Sbjct: 59 RGRRQPIPK 67
209|SequenceR|1050|1041|AEKANKRSSE
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 AEKANKRS 8
AE+ N+RS
Sbjct: 1354 AERRNRRS 1361
210|SequenceR|1055|1046|AKVALAEKAN
***** No hits found ******
211|SequenceR|1060|1051|FDGKAAKVAL
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 FDGKAAKVAL 10
FDG ++AL
Sbjct: 122 FDGDLMRIAL 131
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 DGKAAKVAL 10
DG+ A VAL
Sbjct: 106 DGRTAVVAL 114
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 DGKAAKVAL 10
DG+ A VAL
Sbjct: 106 DGRTAVVAL 114
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FDGKAAKVA 9
FDG KVA
Sbjct: 183 FDGLVKKVA 191
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 FDGKAAKVA 9
FDG K+A
Sbjct: 201 FDGLVKKIA 209
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 FDGKAAKVAL 10
F GKA +AL
Sbjct: 1381 FYGKAIPIAL 1390
212|SequenceR|1065|1056|CFICVFDGKA
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CFICVF 6
CF+C+F
Sbjct: 57 CFLCIF 62
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CFICVF 6
CF+C+F
Sbjct: 57 CFLCIF 62
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ICVFDGKA 10
+CVFDG +
Sbjct: 296 VCVFDGPS 303
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 ICVFDGKA 10
+C FDG A
Sbjct: 297 VCTFDGAA 304
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 3 ICVFDGKA 10
+C FDG A
Sbjct: 297 VCTFDGAA 304
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 CFICVFD 7
C++C+F+
Sbjct: 106 CYLCIFN 112
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 2 FICVFD 7
F+CV+D
Sbjct: 9 FLCVYD 14
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 3 ICVFDGK 9
+C+F+GK
Sbjct: 204 LCIFNGK 210
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 FICVFDGK 9
++C FDGK
Sbjct: 118 YMCGFDGK 125
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 FICVFDGK 9
++C FDGK
Sbjct: 118 YMCGFDGK 125
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 ICVFDGKA 10
+ VFDGK+
Sbjct: 2540 VIVFDGKS 2547
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 ICVFDGKA 10
+ VFDGK+
Sbjct: 2517 VIVFDGKS 2524
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 ICVFDGKA 10
+ VFDGK+
Sbjct: 2540 VIVFDGKS 2547
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 ICVFDGKA 10
+ VFDGK+
Sbjct: 2517 VIVFDGKS 2524
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 235 CYLMITDGSA 244
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 235 CYLMITDGSA 244
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 235 CYLMITDGSA 244
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 235 CYLMITDGSA 244
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 235 CYLMITDGSA 244
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 CFICVFDGKA 10
C++ + DG A
Sbjct: 236 CYLMITDGSA 245
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CFICVF 6
C +CVF
Sbjct: 3754 CILCVF 3759
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 CFICVF 6
CF C++
Sbjct: 79 CFFCLY 84
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CFICVF 6
C +CVF
Sbjct: 3704 CILCVF 3709
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CFICVF 6
C +CVF
Sbjct: 3724 CILCVF 3729
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CVFDGK 9
CV DGK
Sbjct: 303 CVNDGK 308
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 4 CVFDGK 9
CV DGK
Sbjct: 303 CVNDGK 308
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 CFICVFDGKA 10
CF+ +G+A
Sbjct: 524 CFVANAEGRA 533
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 CFICVFDGKA 10
CF+ +G+A
Sbjct: 524 CFVANAEGRA 533
213|SequenceR|1070|1061|RFSRDCFICV
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RFSRDCF 7
R+SR CF
Sbjct: 292 RYSRRCF 298
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 6 CFICV 10
CF+C+
Sbjct: 40 CFVCI 44
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FSRDCF 7
F+RDCF
Sbjct: 384 FARDCF 389
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FSRDCF 7
F+RDCF
Sbjct: 384 FARDCF 389
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 6 CFICV 10
CF+C+
Sbjct: 57 CFLCI 61
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 6 CFICV 10
CF+C+
Sbjct: 57 CFLCI 61
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SRDCFIC 9
SR C +C
Sbjct: 449 SRTCLLC 455
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RFSRDCF 7
R+SR C+
Sbjct: 289 RYSRRCY 295
>sp|US02_HHV2H|PROTEIN US2|Human herpesvirus 2 (strain HG52)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 241 RPCFTCM 247
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 2 FSRDC 6
F+RDC
Sbjct: 211 FARDC 215
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 3 SRDCF 7
+RDCF
Sbjct: 198 ARDCF 202
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SRDCFIC 9
SR C +C
Sbjct: 451 SRTCLLC 457
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SRDCFIC 9
SR C +C
Sbjct: 445 SRTCLLC 451
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 184 RKCFRCI 190
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 189 RKCFRCI 195
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 189 RKCFRCI 195
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 4 RDCFICV 10
R CF C+
Sbjct: 189 RKCFRCI 195
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 189 RKCFRCI 195
>sp|NS1_INCTA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 184 RKCFRCI 190
>sp|NS1_INCJH|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 184 RKCFRCI 190
>sp|NS1_INCYA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/10/1981)
Query: 4 RDCFICV 10
R CF C+
Sbjct: 184 RKCFRCI 190
>sp|NS1_INCGL|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Great
Query: 4 RDCFICV 10
R CF C+
Sbjct: 184 RKCFRCI 190
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 CFIC 9
CF+C
Sbjct: 12 CFVC 15
214|SequenceR|1075|1066|YDKGKRFSRD
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 DKGKRFSRD 10
+K KR++RD
Sbjct: 616 EKAKRYTRD 624
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 YDKGKRFSRD 10
YD FSRD
Sbjct: 764 YDGWSNFSRD 773
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 YDKGKRFSRD 10
YD FSRD
Sbjct: 764 YDGWSNFSRD 773
>sp|YVFD_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YDKGKRFSRD 10
Y + RF RD
Sbjct: 16 YKRKSRFDRD 25
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 DKGKRF 7
DKGKR+
Sbjct: 2806 DKGKRY 2811
>sp|US02_HCMVT|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 2 DKGKRFSR 9
D GK F+R
Sbjct: 55 DNGKLFAR 62
>sp|US02_HCMVM|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 DKGKRFSR 9
D GK F+R
Sbjct: 55 DNGKLFAR 62
>sp|US02_HCMVA|UNIQUE short US2 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 DKGKRFSR 9
D GK F+R
Sbjct: 55 DNGKLFAR 62
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 DKGKRFSRD 10
DK RFS++
Sbjct: 287 DKALRFSKN 295
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 GKRFSRD 10
GK+FS++
Sbjct: 1356 GKKFSKE 1362
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 GKRFSRD 10
GK+FS++
Sbjct: 1376 GKKFSKE 1382
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 GKRFSRD 10
GK+FS++
Sbjct: 1406 GKKFSKE 1412
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 GKRFSRD 10
GK+FS++
Sbjct: 1356 GKKFSKE 1362
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 GKRFSRD 10
GK+FS++
Sbjct: 1376 GKKFSKE 1382
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 GKRFSRD 10
GK+FS++
Sbjct: 1406 GKKFSKE 1412
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 YDKGKRFSRD 10
++KG++ S+D
Sbjct: 948 FNKGQKTSKD 957
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 YDKGKRFSRD 10
++KG++ S+D
Sbjct: 948 FNKGQKTSKD 957
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 DKGKRFSRD 10
DK RFS++
Sbjct: 286 DKALRFSKN 294
215|SequenceR|1080|1071|NLHKSYDKGK
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 NLHKSYD 7
N H SYD
Sbjct: 2834 NYHGSYD 2840
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 LHKSYDKGK 10
L K YDK +
Sbjct: 875 LQKDYDKAQ 883
216|SequenceR|1085|1076|NVLHRNLHKS
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NVLHRNLHK 9
+++H NLHK
Sbjct: 430 SMVHSNLHK 438
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NVLHRNLH 8
N+LH +LH
Sbjct: 678 NLLHHSLH 685
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 NVLHRNLHK 9
+++H N+HK
Sbjct: 430 SMVHSNIHK 438
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 NVLHRNLHK 9
+++H N+HK
Sbjct: 430 SMVHSNIHK 438
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 NVLHRNLHKS 10
NVL +LHK+
Sbjct: 1215 NVLKWHLHKA 1224
>sp|ORF23_TTVV2|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 NVLHRNLH 8
N HRN H
Sbjct: 146 NTTHRNSH 153
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 VLHRNLHK 9
V+HRN+ K
Sbjct: 407 VIHRNVVK 414
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 3 LHRNLHK 9
LH +LHK
Sbjct: 504 LHPSLHK 510
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 NVLHRN 6
NVLH N
Sbjct: 271 NVLHSN 276
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 VLHRNL 7
++HRNL
Sbjct: 401 IVHRNL 406
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VLHRNLH 8
VLH N H
Sbjct: 1146 VLHHNEH 1152
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VLHRNLH 8
VLH N H
Sbjct: 1146 VLHHNEH 1152
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 VLHRNLH 8
VLH N H
Sbjct: 1146 VLHHNEH 1152
>sp|ORF23_TTVV1|PROBABLE protein VP2|Torque teno virus (strain VT416)
Query: 1 NVLHRNLH 8
N HRN H
Sbjct: 146 NTTHRNSH 153
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 LHRNLHKS 10
+H N+H S
Sbjct: 425 IHMNVHAS 432
217|SequenceR|1090|1081|ELYYVNVLHR
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 2 LYYVNVLHR 10
L YV+VL+R
Sbjct: 225 LAYVSVLYR 233
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 2 LYYVNVLHR 10
L YV+VL+R
Sbjct: 225 LAYVSVLYR 233
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 2 LYYVNVLHR 10
L+YVNV R
Sbjct: 350 LWYVNVEQR 358
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YVNVLH 9
YVN LH
Sbjct: 706 YVNALH 711
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YVNVLH 9
YVN LH
Sbjct: 706 YVNALH 711
>sp|MATRX_HRSVB|MATRIX protein|Human respiratory syncytial virus B
Query: 4 YVNVLH 9
YVN LH
Sbjct: 4 YVNKLH 9
>sp|MATRX_HRSVA|MATRIX protein|Human respiratory syncytial virus A
Query: 4 YVNVLH 9
YVN LH
Sbjct: 4 YVNKLH 9
>sp|MATRX_HRSV|MATRIX protein|Human respiratory syncytial virus
Query: 4 YVNVLH 9
YVN LH
Sbjct: 4 YVNKLH 9
>sp|MATRX_HRSS2|MATRIX protein|Human respiratory syncytial virus A
Query: 4 YVNVLH 9
YVN LH
Sbjct: 4 YVNKLH 9
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 ELYYVNV 7
ELY +N+
Sbjct: 344 ELYLINI 350
218|SequenceR|1097|1086|EQGQAAEELYYV
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 EQGQAAEELYY 11
E+G A EE YY
Sbjct: 643 EKGSALEETYY 653
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 QGQAAE 7
QGQAAE
Sbjct: 185 QGQAAE 190
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 QGQAAE 7
QGQAAE
Sbjct: 185 QGQAAE 190
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 7 EELYY 11
EELYY
Sbjct: 20 EELYY 24
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 EQGQAAEELYY 11
E GQ A YY
Sbjct: 1694 ESGQVAVTSYY 1704
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 EQGQAAEELYY 11
E GQ A YY
Sbjct: 1694 ESGQVAVTSYY 1704
THE END