REST_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SSQGMVQTAM

***** No hits found ******


2|SequenceR|15|6|LGGGGSSQGM

>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 1 LGGGGSSQ 8
LGGGGS +
Sbjct: 237 LGGGGSGE 244


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 1 LGGGGSSQ 8
L GGG+SQ
Sbjct: 244 LSGGGASQ 251


>sp|CARB_HYPBU|CARBAMOYL phosphate synthase large chain|Hyperthermus butylicus (strain DSM

Query: 1 LGGGGS 6
LGGGGS
Sbjct: 174 LGGGGS 179


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 GGGSSQGM 10
GGGS++GM
Sbjct: 776 GGGSAEGM 783


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 1 LGGGGSSQGM 10
+G GGSS+ +
Sbjct: 129 IGAGGSSRAV 138


>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 1 LGGGGSSQGM 10
+GG G ++GM
Sbjct: 172 VGGSGQTKGM 181


>sp|MTRH_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina mazei (strain ATCC

Query: 1 LGGGGSSQGM 10
+GG G ++GM
Sbjct: 172 VGGSGQTKGM 181




3|SequenceR|20|11|GSSTFLGGGG

>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 1 GSSTFLGG 8
G++TF+GG
Sbjct: 320 GTNTFMGG 327


>sp|COXX_PYRAR|PROTOHEME IX farnesyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GSSTFLGG 8
G++TFLGG
Sbjct: 140 GNATFLGG 147


>sp|COXX_PYRIL|PROTOHEME IX farnesyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GSSTFLGG 8
G++TFLGG
Sbjct: 140 GNATFLGG 147


>sp|OTC_SULTO|ORNITHINE carbamoyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SSTFLGGGG 10
S TF+G GG
Sbjct: 152 SLTFVGDGG 160


>sp|COXX_PYRNV|PROTOHEME IX farnesyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GSSTFLGG 8
G++TFLGG
Sbjct: 140 GNATFLGG 147




4|SequenceR|25|16|AMGINGSSTF

>sp|G1PDH_PYRCJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AMGINGSS 8
AMGI GSS
Sbjct: 223 AMGIAGSS 230


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AMGINGSS 8
AMGI GSS
Sbjct: 226 AMGIAGSS 233


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AMGINGSS 8
AMGI GSS
Sbjct: 226 AMGIAGSS 233


>sp|G1PDH_PYRAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AMGINGSS 8
AMGI GSS
Sbjct: 226 AMGIAGSS 233


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 MGINGSSTF 10
MGIN STF
Sbjct: 235 MGINVLSTF 243


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 MGINGSSTF 10
MGIN STF
Sbjct: 235 MGINVLSTF 243


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AMGINGSS 8
AMGI GSS
Sbjct: 226 AMGIAGSS 233


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 1 AMGINGSSTF 10
MG++G+S F
Sbjct: 285 GMGVDGASGF 294




5|SequenceR|30|21|MDNPLAMGIN

>sp|RS13_HYPBU|SMALL ribosomal subunit protein uS13|Hyperthermus butylicus (strain DSM

Query: 1 MDNPLAMGI 9
M NPLA+GI
Sbjct: 69 MANPLAIGI 77


>sp|GLMS_SULAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfolobus acidocaldarius (strain

Query: 2 DNPLAMGI 9
DNPL +G+
Sbjct: 179 DNPLVIGL 186


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DNPLAMGIN 10
DNP +GIN
Sbjct: 111 DNPKWLGIN 119


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MDNPLAMG 8
MD PLA G
Sbjct: 152 MDKPLAKG 159


>sp|RISB_METTH|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DNPLAMGIN 10
D P+A+GI+
Sbjct: 97 DKPVALGIS 105


>sp|RTCA_METJA|RNA 3'-terminal phosphate cyclase|Methanocaldococcus jannaschii (strain

Query: 4 PLAMGIN 10
PL++GIN
Sbjct: 106 PLSLGIN 112


>sp|GLMS_METJA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanocaldococcus jannaschii

Query: 2 DNPLAMGIN 10
++PL +GIN
Sbjct: 681 ESPLILGIN 689


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 DNPLAMGIN 10
+ PL MG+N
Sbjct: 290 NGPLIMGVN 298


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 DNPLAMGIN 10
+NP+ GIN
Sbjct: 389 ENPMEFGIN 397


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MDNPLAMGIN 10
M LAMG+N
Sbjct: 266 MAKKLAMGVN 275


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 2 DNPLAMGI 9
D+PLA+G+
Sbjct: 247 DHPLALGM 254


>sp|IF5A_THESM|TRANSLATION initiation factor 5A|Thermococcus sibiricus (strain DSM 12597

Query: 2 DNPLAMGIN 10
D P+A G+N
Sbjct: 98 DVPIATGVN 106


>sp|RISB_META3|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DNPLAMGIN 10
D P+A+GI+
Sbjct: 95 DKPVALGIS 103




6|SequenceR|35|26|DHLDYMDNPL

>sp|ALF1_THETK|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermoproteus tenax (strain ATCC 35583

Query: 4 DYMDNP 9
D+MDNP
Sbjct: 33 DFMDNP 38


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DHLDYMDNP 9
DH+ Y+ NP
Sbjct: 66 DHMPYLPNP 74


>sp|END4_METLZ|PROBABLE endonuclease 4|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DHLDYMDNP 9
DH+ Y+ NP
Sbjct: 66 DHMPYLPNP 74


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 1 DHLDYM 6
DH DYM
Sbjct: 230 DHFDYM 235


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 3 LDYMDNPL 10
+ Y DNPL
Sbjct: 19 MTYFDNPL 26


>sp|RUXX_AERPE|PUTATIVE snRNP Sm-like protein|Aeropyrum pernix (strain ATCC 700893

Query: 3 LDYMDNPL 10
LDY+D P+
Sbjct: 14 LDYVDTPV 21


>sp|KPRS_METTH|RIBOSE-PHOSPHATE pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 1 DHLDYMDNPL 10
+H+ ++D+P+
Sbjct: 148 EHISFLDDPV 157


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DHLDYMDNP 9
DH Y D P
Sbjct: 285 DHFGYYDKP 293


>sp|PIMT_IGNH4|PROTEIN-L-ISOASPARTATE O-methyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 HLDYMDNPL 10
H+ Y D PL
Sbjct: 42 HMAYEDTPL 50


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 HLDYMDNPL 10
HL Y D PL
Sbjct: 52 HLAYEDTPL 60


>sp|Y838_METJA|UNCHARACTERIZED protein MJ0838|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DHLDYMDN 8
D+ DY+DN
Sbjct: 117 DYKDYLDN 124


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 DHLDYMDN 8
D+L YM+N
Sbjct: 247 DYLRYMEN 254


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 5 YMDNPL 10
Y DNPL
Sbjct: 46 YQDNPL 51


>sp|FER_HALSA|FERREDOXIN salinarum (strain ATCC 700922

Query: 2 HLDYMDN 8
HLDY+ N
Sbjct: 120 HLDYLQN 126


>sp|CHER_HALS3|CHEMOTAXIS protein methyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 DHLDYMDNP 9
D L ++DNP
Sbjct: 156 DQLGFLDNP 164


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DHLDYMD 7
DH+D MD
Sbjct: 271 DHIDIMD 277


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DHLDYMDNP 9
DH D +D+P
Sbjct: 262 DHPDQIDDP 270


>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLDYMDN 8
H DY DN
Sbjct: 143 HYDYWDN 149


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 2 HLDYMDNP 9
HLDY+ P
Sbjct: 129 HLDYVPEP 136


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 2 HLDYMDNPL 10
HL Y D P+
Sbjct: 20 HLSYDDQPI 28


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 HLDYMDNP 9
HL YM P
Sbjct: 194 HLQYMPTP 201


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 HLDYMDNPL 10
H DY NPL
Sbjct: 162 HDDYEGNPL 170


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 2 HLDYMDNPL 10
H D+M +PL
Sbjct: 308 HQDWMKHPL 316




7|SequenceR|40|31|EAKSLDHLDY

>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EAKSLDHLD 9
EA++LD+LD
Sbjct: 54 EARALDYLD 62


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AKSLDHLDY 10
AK+LD +DY
Sbjct: 58 AKALDEVDY 66


>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 3 KSLDHLD 9
++LDHLD
Sbjct: 36 RNLDHLD 42


>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain DSM

Query: 1 EAKSLDHLDY 10
EA+SL LDY
Sbjct: 188 EARSLFSLDY 197


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 AKSLDHLDY 10
AK+LD LD+
Sbjct: 51 AKNLDALDF 59


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 EAKSLDHLD 9
EA +LD+LD
Sbjct: 54 EALALDYLD 62


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 5 LDHLDY 10
+DH+DY
Sbjct: 160 IDHVDY 165


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 LDHLDY 10
+DH+DY
Sbjct: 160 IDHVDY 165


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 EAKSLDHLDY 10
+ KSLDH Y
Sbjct: 106 DIKSLDHEKY 115


>sp|SPSS2_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 LDHLDY 10
+DH+DY
Sbjct: 221 MDHIDY 226


>sp|PCNA_METB6|DNA polymerase sliding clamp|Methanoregula boonei (strain DSM 21154

Query: 1 EAKSLDHLDY 10
EA+SL LDY
Sbjct: 190 EARSLFSLDY 199


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 LDHLDY 10
+DH+DY
Sbjct: 160 IDHVDY 165


>sp|PCNA_NATPD|DNA polymerase sliding clamp|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAKSLDHLDY 10
EA+SL LDY
Sbjct: 190 EARSLFSLDY 199


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EAKSLDHLDY 10
E LDHL+Y
Sbjct: 199 ETVGLDHLEY 208


>sp|PCNA_METJA|DNA polymerase sliding clamp|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EAKSLDHLDY 10
EAKS +LDY
Sbjct: 193 EAKSAFNLDY 202




8|SequenceR|45|36|QPAALEAKSL

***** No hits found ******


9|SequenceR|50|41|ALMILQPAAL

***** No hits found ******


10|SequenceR|55|46|TLAVNALMIL

***** No hits found ******


11|SequenceR|60|51|GNVEGTLAVN

>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 1 GNVEGTLAV 9
GNVEG A+
Sbjct: 77 GNVEGNRAI 85


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 GNVEGTLAVN 10
GN+EG L ++
Sbjct: 362 GNIEGALILD 371


>sp|IF2B_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain

Query: 1 GNVEGTLAV 9
GN+EG+ A+
Sbjct: 70 GNLEGSRAI 78


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 1 GNVEGTLAVN 10
GN+EG + V+
Sbjct: 193 GNLEGAMRVD 202


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 1 GNVEGTLAVN 10
GN+EG + V+
Sbjct: 193 GNLEGAMRVD 202


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 1 GNVEGTLAVN 10
GN+EG + V+
Sbjct: 193 GNLEGAMRVD 202




12|SequenceR|65|56|YDCCSGNVEG

>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 DCCSGNVE 9
DCCSG VE
Sbjct: 74 DCCSGKVE 81


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YDCCSGNVEG 10
Y+ CSGNVE
Sbjct: 534 YEMCSGNVEA 543


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 YDCCSGNVEG 10
YDCC G V G
Sbjct: 262 YDCCFGPVMG 271


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YDCCSGNV 8
YDCC G +
Sbjct: 263 YDCCFGPI 270


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain

Query: 5 SGNVEG 10
SGNVEG
Sbjct: 76 SGNVEG 81


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 CSGNVE 9
C GNVE
Sbjct: 105 CQGNVE 110


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YDCCSG 6
Y CC+G
Sbjct: 96 YGCCTG 101


>sp|COOS1_METAC|CARBON monoxide dehydrogenase 1|Methanosarcina acetivorans (strain ATCC

Query: 3 CCSGN 7
CC+GN
Sbjct: 301 CCTGN 305


>sp|COOS1_METMA|CARBON monoxide dehydrogenase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CCSGN 7
CC+GN
Sbjct: 301 CCTGN 305


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 DCCSGNVEG 10
D SGNV+G
Sbjct: 96 DSFSGNVKG 104


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 YDCCSGNVEG 10
YD G VEG
Sbjct: 90 YDSREGKVEG 99


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 YDCCSGNVEG 10
YD +G +EG
Sbjct: 90 YDTDAGKIEG 99




13|SequenceR|70|61|EEGVLYDCCS

>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEGVLYDC 8
+EGV+Y+C
Sbjct: 297 KEGVMYEC 304


>sp|CDPAS_NATPD|CDP-ARCHAEOL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EEGVLYD 7
E+GVLYD
Sbjct: 44 EDGVLYD 50


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EEGVLYDCCS 10
E+GVL +C S
Sbjct: 359 EQGVLVNCTS 368


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EEGVLYDC 8
+EG++Y C
Sbjct: 297 KEGIMYQC 304


>sp|DNAG_SACS2|DNA primase DnaG|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 324 EGVLYD 329


>sp|DNAG_SACI7|DNA primase DnaG|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 320 EGVLYD 325


>sp|DNAG_SACI6|DNA primase DnaG|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 320 EGVLYD 325


>sp|DNAG_SACI4|DNA primase DnaG|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 320 EGVLYD 325


>sp|DNAG_SACI3|DNA primase DnaG|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 320 EGVLYD 325


>sp|DNAG_SACI2|DNA primase DnaG|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 320 EGVLYD 325


>sp|DNAG_SACI1|DNA primase DnaG|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EGVLYD 7
EGVLYD
Sbjct: 320 EGVLYD 325


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EEGVLYD 7
E GVLYD
Sbjct: 364 EAGVLYD 370


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEGVLYD 7
E GVLYD
Sbjct: 364 EAGVLYD 370


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 VLYDCCS 10
V+Y CC+
Sbjct: 467 VMYTCCT 473


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 6 YDCC 9
YDCC
Sbjct: 263 YDCC 266


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 EEGVLYDC 8
++G++Y+C
Sbjct: 293 KDGIMYEC 300


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEGVLYDC 8
++G++Y+C
Sbjct: 289 KDGIMYEC 296


>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 1 EEGVLYD 7
EEGV+Y+
Sbjct: 85 EEGVIYE 91


>sp|Y1316_THEGJ|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 EEGVLYD 7
EEGV+Y+
Sbjct: 85 EEGVIYE 91


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 6 YDCC 9
YDCC
Sbjct: 262 YDCC 265


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EEGVLYDCCS 10
E GVL +C S
Sbjct: 359 EHGVLVNCTS 368


>sp|RASEA_METAC|ARCHAEOSINE synthase subunit beta|Methanosarcina acetivorans (strain ATCC

Query: 3 GVLYDCCS 10
G +YDC S
Sbjct: 63 GYVYDCAS 70


>sp|ILVD_PYRAR|DIHYDROXY-ACID dehydratase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EEGVLYD 7
E G+LYD
Sbjct: 364 EAGILYD 370


>sp|Y539_THEKO|PUTATIVE HTH-type transcriptional regulatory protein|Thermococcus

Query: 1 EEGVLYD 7
EEGV+Y+
Sbjct: 85 EEGVVYE 91


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 3 GVLYDC 8
GV+YDC
Sbjct: 262 GVVYDC 267


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VLYDCC 9
+LY CC
Sbjct: 464 ILYTCC 469


>sp|RL10_METVO|LARGE ribosomal subunit protein uL10|Methanococcus voltae

Query: 1 EEGVLYD 7
E+G++YD
Sbjct: 201 EDGIVYD 207


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EEGVLYDC 8
+EG+L++C
Sbjct: 465 DEGLLHEC 472


>sp|ENO_METLZ|ENOLASE labreanum (strain ATCC 43576

Query: 1 EEGVLYDCCS 10
EEG+ D C+
Sbjct: 312 EEGIRNDACN 321




14|SequenceR|75|66|EAMQREEGVL

>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EAMQREEGV 9
E MQ+E G+
Sbjct: 390 EVMQKESGI 398


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EAMQREEGV 9
E MQ+E G+
Sbjct: 390 EVMQKESGI 398


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EAMQREEGV 9
E MQ+E G+
Sbjct: 390 EVMQKESGI 398


>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina barkeri

Query: 1 EAMQREEGVL 10
+ +QR EG+L
Sbjct: 105 DVIQRPEGIL 114


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EAMQREEGVL 10
E QRE+GV+
Sbjct: 419 ENYQREDGVV 428


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EAMQREEGVL 10
E QRE+GV+
Sbjct: 412 ENFQREDGVV 421


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 EAMQREEGV 9
EAM+REE +
Sbjct: 122 EAMEREESL 130




15|SequenceR|80|71|GVPMLEAMQR

>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 GVPMLEAMQR 10
GVPM E M+R
Sbjct: 316 GVPMYEEMKR 325


>sp|DPO4_SULAC|DNA polymerase IV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVPMLEAMQ 9
G+P+++AMQ
Sbjct: 58 GMPIIKAMQ 66


>sp|DPO4_SACSO|DNA polymerase IV|Saccharolobus solfataricus (Sulfolobus

Query: 1 GVPMLEAMQ 9
G+P+++AMQ
Sbjct: 58 GMPIIKAMQ 66


>sp|HPRL1_HALMA|HGPRTASE-LIKE protein 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|HPRL1_HALVD|HGPRTASE-LIKE protein 1|Haloferax volcanii (strain ATCC 29605

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|HPRL_NATPD|HGPRTASE-LIKE protein|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 160 GMPFLEALRQ 169


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 160 GMPFLEALRQ 169


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GVPMLEAMQ 9
G+P+LEA Q
Sbjct: 99 GLPILEAPQ 107


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVPMLEAMQR 10
GVP+ E M+R
Sbjct: 377 GVPVREVMRR 386


>sp|HPRL_HALSA|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|HPRL_HALS3|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|HPRL2_HALJB|HGPRTASE-LIKE protein 2|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 GVPMLE 6
GVPMLE
Sbjct: 29 GVPMLE 34


>sp|Y843_ARCFU|UNCHARACTERIZED protein AF_0843|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PMLEAMQR 10
PMLE M+R
Sbjct: 57 PMLELMRR 64


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 162 GMPYLEALRQ 171


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 162 GMPYLEALRQ 171


>sp|PYRG_NATPD|CTP synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 161 GMPYLEALRQ 170


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 151 GLPFLEAVRQ 160


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 162 GMPYLEALRQ 171


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 151 GLPFLEAVRQ 160


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 GVPMLEA 7
G+P+LEA
Sbjct: 97 GIPLLEA 103


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVPMLEAMQR 10
G+P LEA+++
Sbjct: 150 GMPFLEAIRQ 159


>sp|MVK_PYRFU|MEVALONATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VPMLEAMQR 10
VP+LEAM +
Sbjct: 218 VPILEAMGK 226


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB3_METBA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina barkeri

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 279 GIPMLE 284


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB1_METBF|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 327 GIPMLE 332


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 1 GVPMLE 6
G+PMLE
Sbjct: 279 GIPMLE 284




16|SequenceR|85|76|SFNNDGVPML

>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SFNNDGV 7
SFNNDGV
Sbjct: 53 SFNNDGV 59


>sp|HPRL_HALUD|HGPRTASE-LIKE protein|Halorhabdus utahensis (strain DSM 12940

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL_HALMD|HGPRTASE-LIKE protein|Halomicrobium mukohataei (strain ATCC 700874

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL2_HALMA|HGPRTASE-LIKE protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL2_HALJB|HGPRTASE-LIKE protein 2|Halalkalicoccus jeotgali (strain DSM 18796

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL_HALLT|HGPRTASE-LIKE protein|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 2 FNNDGVP 8
FN+DG P
Sbjct: 229 FNDDGTP 235


>sp|HPRL_HALSA|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 700922

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL_HALS3|HGPRTASE-LIKE protein|Halobacterium salinarum (strain ATCC 29341

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL_HALBP|HGPRTASE-LIKE protein|Halogeometricum borinquense (strain ATCC 700274

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL1_HALVD|HGPRTASE-LIKE protein 1|Haloferax volcanii (strain ATCC 29605

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|HPRL_NATPD|HGPRTASE-LIKE protein|Natronomonas pharaonis (strain ATCC 35678

Query: 4 NDGVPML 10
+DGVPML
Sbjct: 27 SDGVPML 33


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 FNNDGVPML 10
FN G+P++
Sbjct: 128 FNRSGIPLI 136


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SFNNDGV 7
+FNNDGV
Sbjct: 53 TFNNDGV 59


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 2 FNNDGVP 8
FN DG+P
Sbjct: 433 FNLDGIP 439


>sp|FLAB1_METVS|FLAGELLIN B1|Methanococcus vannielii (strain ATCC 35089

Query: 2 FNNDGVP 8
F NDG+P
Sbjct: 174 FGNDGIP 180


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 FNNDGVPML 10
FN G+P++
Sbjct: 128 FNRSGIPLI 136


>sp|HPRT_METZD|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 4 NDGVPML 10
+DGVP+L
Sbjct: 28 SDGVPLL 34


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 FNNDGVPML 10
FN G+P++
Sbjct: 128 FNRSGIPLI 136


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NNDGVP 8
NNDG+P
Sbjct: 1403 NNDGIP 1408


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FNNDGVPML 10
FNNDG ++
Sbjct: 120 FNNDGADIV 128




17|SequenceR|90|81|GEESDSFNND

>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 EESDSFNND 10
EE+D F ND
Sbjct: 544 EETDQFTND 552


>sp|F16A2_HALMA|FRUCTOSE-1,6-BISPHOSPHATASE class 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 GEESDSFNN 9
GE SD+FN+
Sbjct: 171 GERSDAFND 179


>sp|AATC_HALWD|A-TYPE ATP synthase subunit C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GEESDSFNND 10
G ESD+ N+D
Sbjct: 114 GTESDTVNDD 123


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 1 GEESDSFNND 10
G+ES S N D
Sbjct: 214 GQESSSENRD 223


>sp|SPEE_PICTO|POLYAMINE aminopropyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 EESDSFNN 9
E +DSFNN
Sbjct: 123 ELADSFNN 130




18|SequenceR|95|86|EELGEGEESD

>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 2 ELGEGEES 9
E GEG+ES
Sbjct: 210 EKGEGQES 217




19|SequenceR|100|91|KIDASEELGE

>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 4 ASEELGE 10
ASEELGE
Sbjct: 444 ASEELGE 450


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 2 IDASEELG 9
+DA+EE+G
Sbjct: 32 VDAAEEIG 39


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IDASEELG 9
IDA +ELG
Sbjct: 32 IDAQDELG 39


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IDASEELG 9
IDA +ELG
Sbjct: 32 IDAQDELG 39


>sp|IF6_METMJ|TRANSLATION initiation factor 6|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KIDASEELG 9
+ID +EE+G
Sbjct: 116 QIDVAEEIG 124




20|SequenceR|105|96|GHPEGKIDAS

>sp|MNTP_METBF|MANGANESE exporter MntP|Methanosarcina barkeri (strain Fusaro /

Query: 1 GHPEGKIDA 9
G P+GKI++
Sbjct: 91 GDPDGKINS 99


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PEGKIDAS 10
PEG +DA+
Sbjct: 400 PEGNVDAN 407


>sp|RS19_CALMQ|SMALL ribosomal subunit protein uS19|Caldivirga maquilingensis (strain

Query: 3 PEGKIDA 9
PEGK++A
Sbjct: 5 PEGKVEA 11


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 GHPEGKI 7
G+PEGK+
Sbjct: 101 GYPEGKV 107


>sp|MNTP_METMA|MANGANESE exporter MntP|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GHPEGKIDA 9
G P+GK+++
Sbjct: 91 GDPDGKVNS 99


>sp|LEUC1_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 GHPEGKI 7
G PEGKI
Sbjct: 388 GSPEGKI 394


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 GHPEGKID 8
GHP KI+
Sbjct: 151 GHPTNKIE 158


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 GHPEGKID 8
GHP KI+
Sbjct: 145 GHPTDKIE 152


>sp|RADA_PYRNV|DNA repair and recombination protein|Pyrobaculum neutrophilum (strain

Query: 2 HPEGKI 7
HPEG++
Sbjct: 314 HPEGEV 319


>sp|RADA_PYRIL|DNA repair and recombination protein|Pyrobaculum islandicum (strain DSM

Query: 2 HPEGKI 7
HPEG++
Sbjct: 314 HPEGEV 319


>sp|SYDND_METKA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PEGKIDA 9
P GK+DA
Sbjct: 109 PTGKVDA 115


>sp|RADA_PYRAE|DNA repair and recombination protein|Pyrobaculum aerophilum (strain

Query: 2 HPEGKI 7
HPEG++
Sbjct: 317 HPEGEV 322


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 2 HPEGKID 8
HPEG+++
Sbjct: 256 HPEGEVE 262


>sp|RADA_PYRCJ|DNA repair and recombination protein|Pyrobaculum calidifontis (strain

Query: 2 HPEGKI 7
HPEG++
Sbjct: 316 HPEGEV 321


>sp|LEUC_CALMQ|3-ISOPROPYLMALATE dehydratase large subunit|Caldivirga maquilingensis (strain ATCC

Query: 1 GHPEGKI 7
G PEGK+
Sbjct: 385 GSPEGKV 391


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 2 HPEGK 6
HPEGK
Sbjct: 261 HPEGK 265


>sp|RADA_PYRAR|DNA repair and recombination protein|Pyrobaculum arsenaticum (strain

Query: 2 HPEGKI 7
HPEG++
Sbjct: 317 HPEGEV 322


>sp|PSA_METBF|PROTEASOME subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 4 EGKIDAS 10
EGK DAS
Sbjct: 203 EGKFDAS 209




21|SequenceR|110|101|EMNELGHPEG

>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EMNELGHPE 9
EM ELGH E
Sbjct: 76 EMKELGHDE 84


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 EMNELGHPEG 10
E +E+G PEG
Sbjct: 137 EKSEVGAPEG 146


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 MNELGHP 8
MNE+G P
Sbjct: 134 MNEIGEP 140


>sp|MVHA_METFE|F420-NON-REDUCING hydrogenase subunit A|Methanothermus fervidus

Query: 2 MNELGHPEG 10
+ ELG+P+G
Sbjct: 277 LKELGYPDG 285


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MNELGHPEG 10
+ ELG+P+G
Sbjct: 53 VKELGNPKG 61


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 5 LGHPEG 10
LGHP+G
Sbjct: 395 LGHPDG 400


>sp|RL14_METMJ|LARGE ribosomal subunit protein uL14|Methanoculleus marisnigri (strain

Query: 2 MNELGHPEG 10
+NE G P+G
Sbjct: 98 INERGEPKG 106


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 5 LGHPEG 10
LGHP+G
Sbjct: 395 LGHPDG 400


>sp|RL2_THEKO|LARGE ribosomal subunit protein uL2|Thermococcus kodakarensis (strain

Query: 1 EMNELGHPEG 10
+MN + HP G
Sbjct: 196 KMNAVNHPHG 205


>sp|RL2_THEGJ|LARGE ribosomal subunit protein uL2|Thermococcus gammatolerans (strain

Query: 1 EMNELGHPEG 10
+MN + HP G
Sbjct: 196 KMNAVNHPHG 205


>sp|RL2_THEON|LARGE ribosomal subunit protein uL2|Thermococcus onnurineus (strain NA1)

Query: 1 EMNELGHPEG 10
+MN + HP G
Sbjct: 196 KMNAVNHPHG 205


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 2 MNELGH 7
M+ELGH
Sbjct: 135 MHELGH 140


>sp|AMZA_PYRAB|ARCHAEMETZINCIN abyssi (strain GE5 /

Query: 2 MNELGHPEG 10
M+ELGH G
Sbjct: 136 MHELGHVFG 144


>sp|AMZA_PYRHO|ARCHAEMETZINCIN horikoshii (strain ATCC 700860

Query: 2 MNELGHPEG 10
M+ELGH G
Sbjct: 136 MHELGHVFG 144




22|SequenceR|115|106|ELSRLEMNEL

***** No hits found ******


23|SequenceR|120|111|EVVSLELSRL

>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 EVVSLELSR 9
E VSLE+SR
Sbjct: 77 EEVSLEMSR 85


>sp|CHEB_HALMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Haloarcula marismortui

Query: 3 VSLELSRL 10
VS+E+SRL
Sbjct: 112 VSMEMSRL 119


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 EVVSLELSR 9
E VSLE+SR
Sbjct: 82 EEVSLEMSR 90


>sp|Y426_ARCFU|UNCHARACTERIZED protein AF_0426|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVSLELSRL 10
V+SLE+SR+
Sbjct: 14 VLSLEISRI 22




24|SequenceR|125|116|FVPQPEVVSL

>sp|RL10E_METM7|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 VPQPEVV 8
VPQP+VV
Sbjct: 26 VPQPKVV 32


>sp|RL10E_METM6|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 VPQPEVV 8
VPQP+VV
Sbjct: 26 VPQPKVV 32


>sp|RL10E_METM5|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 VPQPEVV 8
VPQP+VV
Sbjct: 26 VPQPKVV 32


>sp|RL10E_META3|LARGE ribosomal subunit protein uL16|Methanococcus aeolicus (strain

Query: 2 VPQPEVV 8
VPQP+VV
Sbjct: 26 VPQPKVV 32


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 FVPQPEVVSL 10
F P+P+VV L
Sbjct: 113 FAPRPDVVIL 122


>sp|RL10E_METMP|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 2 VPQPEVV 8
VPQP+VV
Sbjct: 26 VPQPKVV 32


>sp|IF2B_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 2 VPQPEVV 8
+P+PE++
Sbjct: 28 IPEPEII 34


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FVPQPEVVS 9
F+P P+V++
Sbjct: 167 FLPTPDVIN 175


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 2 VPQPEVV 8
VPQP+VV
Sbjct: 27 VPQPKVV 33


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FVPQPEVV 8
VP PEVV
Sbjct: 85 LVPDPEVV 92




25|SequenceR|130|121|AGSAEFVPQP

>sp|DNAG_HALMA|DNA primase DnaG|Haloarcula marismortui (strain ATCC 43049

Query: 1 AGSAEFVPQP 10
AG E+V QP
Sbjct: 427 AGHGEYVKQP 436


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SAEFVP 8
SAEFVP
Sbjct: 106 SAEFVP 111


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 1 AGSAEFVPQP 10
G EFVP P
Sbjct: 236 GGITEFVPLP 245


>sp|COFH_METTH|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanothermobacter thermautotrophicus

Query: 1 AGSAEFVPQP 10
G EFVP P
Sbjct: 244 GGFTEFVPLP 253


>sp|Y1828_METM6|UPF0145 protein MmarC6_1828|Methanococcus maripaludis (strain C6 /

Query: 1 AGSAEFV 7
AGSAEF+
Sbjct: 89 AGSAEFL 95


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GSAEFVPQP 10
G+AEFV P
Sbjct: 230 GAAEFVELP 238


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 AGSAEFVPQP 10
G EFVP P
Sbjct: 236 GGITEFVPLP 245


>sp|HIS1_PYRIL|ATP phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AGSAEFVPQ 9
AGS E +PQ
Sbjct: 139 AGSVEILPQ 147


>sp|Y137_METJA|UNCHARACTERIZED protein MJ0137|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSAEFVPQP 10
G+ EF+P P
Sbjct: 270 GTVEFMPYP 278


>sp|COFH1_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina barkeri (strain Fusaro

Query: 1 AGSAEFVPQP 10
G EFVP P
Sbjct: 236 GGITEFVPLP 245


>sp|TRPA_HALSA|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 700922

Query: 1 AGSAEFVPQP 10
AG+A VP+P
Sbjct: 264 AGAARGVPEP 273


>sp|TRPA_HALS3|TRYPTOPHAN synthase alpha chain|Halobacterium salinarum (strain ATCC 29341

Query: 1 AGSAEFVPQP 10
AG+A VP+P
Sbjct: 264 AGAARGVPEP 273


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 1 AGSAEFVPQ 9
AG+AEF P+
Sbjct: 413 AGAAEFGPR 421


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 2 GSAEFVPQP 10
G+ +F+P+P
Sbjct: 103 GAIDFIPKP 111


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 GSAEFVPQP 10
G+A +VP+P
Sbjct: 277 GAAIYVPEP 285




26|SequenceR|135|126|SYIDPAGSAE

>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 SYIDPAGSAE 10
S +DPAG+ E
Sbjct: 178 SQMDPAGTQE 187


>sp|COFE_ARCFU|COENZYME F420:L-glutamate ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IDPAGSAE 10
+DP GSAE
Sbjct: 123 LDPDGSAE 130


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 SYIDPAGSAE 10
S +DPAG+ E
Sbjct: 179 SDLDPAGTGE 188


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SYIDPAGSAE 10
+Y DP G AE
Sbjct: 58 TYYDPPGQAE 67


>sp|ECFA2_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 SYIDPAGSAE 10
S +DPAGS +
Sbjct: 169 SMLDPAGSED 178


>sp|AROD_SULAC|3-DEHYDROQUINATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SYIDPAGSA 9
+YIDPA A
Sbjct: 71 NYIDPAFKA 79


>sp|PSB_HALVD|PROTEASOME subunit beta|Haloferax volcanii (strain ATCC 29605

Query: 3 IDPAGS 8
IDPAGS
Sbjct: 161 IDPAGS 166


>sp|PSB_HALWD|PROTEASOME subunit beta|Haloquadratum walsbyi (strain DSM 16790

Query: 3 IDPAGS 8
IDPAGS
Sbjct: 161 IDPAGS 166


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain

Query: 1 SYIDPAGSAE 10
+Y P GSAE
Sbjct: 73 NYTHPLGSAE 82


>sp|IXTPA_ARCFU|DITP/XTP pyrophosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YIDPAGSA 9
YI+P GS+
Sbjct: 32 YIEPQGSS 39


>sp|PURL_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SYIDPAGSA 9
SYIDP A
Sbjct: 87 SYIDPYNGA 95


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC

Query: 1 SYIDPAGSA 9
SYIDP A
Sbjct: 87 SYIDPYNGA 95




27|SequenceR|140|131|LDKNSSYIDP

>sp|SECG_HALWD|PREPROTEIN translocase subunit SecG|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DKNSSYIDP 10
D+NS IDP
Sbjct: 24 DRNSIRIDP 32


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 LDKNSSYID 9
LDKN Y+D
Sbjct: 260 LDKNQKYLD 268


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 LDKNSSYIDP 10
LD+N+ ++DP
Sbjct: 18 LDQNAQHVDP 27


>sp|KATG_HALSA|CATALASE-PEROXIDASE salinarum (strain ATCC 700922

Query: 1 LDKNSSYIDP 10
LD+NS +DP
Sbjct: 23 LDQNSQQVDP 32


>sp|KATG_HALS3|CATALASE-PEROXIDASE salinarum (strain ATCC 29341

Query: 1 LDKNSSYIDP 10
LD+NS +DP
Sbjct: 23 LDQNSQQVDP 32


>sp|GLYA_THEVO|SERINE hydroxymethyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 DKNSSYIDP 10
DKN+ +DP
Sbjct: 142 DKNTMTVDP 150


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDKNSSYI 8
LDKN YI
Sbjct: 200 LDKNPGYI 207


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LDKNSSYIDP 10
+DKN + DP
Sbjct: 344 VDKNGRFADP 353


>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDKNSSYID 9
L KNSSYI+
Sbjct: 19 LYKNSSYIN 27


>sp|TYW3_SACS2|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 2 DKNSSYIDP 10
DK Y+DP
Sbjct: 18 DKEIGYLDP 26


>sp|Y2077_ARCFU|UNCHARACTERIZED protein AF_2077|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DKNSSYI 8
D NSSYI
Sbjct: 37 DNNSSYI 43


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 LDKNSSY 7
LD+NSSY
Sbjct: 280 LDENSSY 286


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 LDKNSSYIDP 10
L++ S+Y+DP
Sbjct: 473 LEELSTYLDP 482


>sp|ADEC_STAMF|ADENINE deaminase|Staphylothermus marinus (strain ATCC 43588

Query: 1 LDKNSSYIDP 10
L KN YI P
Sbjct: 354 LSKNIEYIKP 363




28|SequenceR|145|136|PTEPPLDKNS

>sp|AMZA_AERPE|ARCHAEMETZINCIN pernix (strain ATCC 700893

Query: 1 PTEPPLDKNS 10
P EPP++ S
Sbjct: 42 PLEPPIEAYS 51


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 3 EPPLDK 8
EPP+DK
Sbjct: 372 EPPIDK 377


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 PTEPPLDKN 9
P PLDKN
Sbjct: 284 PNLRPLDKN 292


>sp|Y1639_METJA|UNCHARACTERIZED protein MJ1639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTEPPLDKNS 10
P PLDKNS
Sbjct: 31 PFFEPLDKNS 40


>sp|EF1B_METM7|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C7 /

Query: 1 PTEPPLDKNS 10
PT P +DK S
Sbjct: 12 PTSPEVDKES 21


>sp|HTR6_HALS3|TRANSDUCER protein Htr6|Halobacterium salinarum (strain ATCC 29341

Query: 3 EPPLDKNS 10
EP LD NS
Sbjct: 225 EPVLDSNS 232


>sp|RS2_NANEQ|SMALL ribosomal subunit protein uS2|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 TEPPLDKNS 10
T+P +DKN+
Sbjct: 116 TDPIMDKNA 124




29|SequenceR|150|141|KDEAGPTEPP

>sp|PSTB2_NATPD|PHOSPHATE import ATP-binding protein PstB|Natronomonas pharaonis (strain ATCC

Query: 3 EAGPTE 8
EAGPTE
Sbjct: 258 EAGPTE 263


>sp|ACDD_METTH|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanothermobacter

Query: 1 KDEAGPTE 8
KDE GPT+
Sbjct: 318 KDEWGPTD 325


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 2 DEAGPTEPP 10
DE G EPP
Sbjct: 262 DELGVVEPP 270


>sp|THIE_METB6|THIAMINE-PHOSPHATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KDEAGP 6
KD+AGP
Sbjct: 135 KDDAGP 140


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DEAGPTEP 9
D+ GP EP
Sbjct: 549 DKVGPIEP 556




30|SequenceR|155|146|KSSKGKDEAG

***** No hits found ******


31|SequenceR|160|151|RFPKTKSSKG

>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FPKTKSS 8
FPKTK S
Sbjct: 485 FPKTKLS 491


>sp|ACSA_PYRAR|ACETYL-COENZYME A synthetase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RFPKTKSSK 9
+ PKT+S K
Sbjct: 618 KLPKTRSGK 626


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RFPKTKSSK 9
+ PKT+S K
Sbjct: 618 KLPKTRSGK 626




32|SequenceR|165|156|QCPKCRFPKT

>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CPKCRFPK 9
CP C +PK
Sbjct: 145 CPYCHYPK 152


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 1 QCPKCRFPK 9
QCP+ RFP+
Sbjct: 229 QCPRVRFPE 237


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CPKCRFPKT 10
C +CR P+T
Sbjct: 539 CRRCRVPRT 547


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 CPKCRFPKT 10
CPKC P T
Sbjct: 678 CPKCHKPTT 686


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 QCPKCRFP 8
+CPKC P
Sbjct: 627 RCPKCGMP 634


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QCPKC 5
QCPKC
Sbjct: 708 QCPKC 712


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 1 QCPKC 5
QCPKC
Sbjct: 360 QCPKC 364


>sp|IF2G_METAC|TRANSLATION initiation factor 2 subunit|Methanosarcina acetivorans (strain

Query: 1 QCPKCRFPK 9
+CPKC P+
Sbjct: 89 KCPKCPAPQ 97


>sp|IF2G_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 1 QCPKCRFPK 9
+CPKC P+
Sbjct: 57 KCPKCGAPE 65


>sp|SUI1_METLZ|PROTEIN translation factor SUI1 homolog|Methanocorpusculum labreanum

Query: 2 CPKCRFPK 9
CPKC PK
Sbjct: 6 CPKCGLPK 13


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 CPKCR 6
CPKCR
Sbjct: 171 CPKCR 175


>sp|IF2G_METMA|TRANSLATION initiation factor 2 subunit|Methanosarcina mazei (strain ATCC

Query: 1 QCPKCRFPK 9
+CPKC P+
Sbjct: 77 KCPKCPEPQ 85


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CPKCR 6
CPKCR
Sbjct: 171 CPKCR 175


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 189 CPKCENP 195


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 192 CPKCENP 198


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 192 CPKCENP 198


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 192 CPKCENP 198


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 144 CPNCNSPK 151


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QCPKCRFP 8
+CPKC P
Sbjct: 136 KCPKCGSP 143


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 144 CPNCNSPK 151


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 CPKCRFPKT 10
CP CR T
Sbjct: 676 CPSCRMKNT 684


>sp|Y282_ARCFU|UPF0212 protein AF_0282|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 51 CPKCNSP 57


>sp|IF2B_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 102 CPECGLPDT 110


>sp|IF2B_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 102 CPECGLPDT 110


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CPKCRF 7
CP+C F
Sbjct: 117 CPRCEF 122


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKCRFPKT 10
CPKC KT
Sbjct: 209 CPKCGATKT 217


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 177 CRRCKVPRT 185


>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 2 CPKCRFPKT 10
C KC P+T
Sbjct: 176 CRKCNVPRT 184


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 QCPKC 5
QCP+C
Sbjct: 183 QCPRC 187


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QCPKC 5
QCP+C
Sbjct: 183 QCPRC 187


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 QCPKC 5
QCP+C
Sbjct: 183 QCPRC 187


>sp|FRHG_METJA|COENZYME F420 hydrogenase subunit gamma|Methanocaldococcus jannaschii

Query: 1 QCPKCRFPK 9
QCP+ RFP+
Sbjct: 216 QCPRIRFPE 224


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 1 QCPKCRF 7
QCPKC +
Sbjct: 236 QCPKCPY 242


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 102 CPECGLPDT 110


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 QCPKCRF 7
+CPKC +
Sbjct: 245 ECPKCGY 251


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 200 CRRCKVPRT 208


>sp|RL37A_METMP|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 1 QCPKCRFPK 9
+CP C FPK
Sbjct: 40 KCPVCAFPK 48


>sp|RL37A_METM7|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 1 QCPKCRFPK 9
+CP C FPK
Sbjct: 40 KCPVCAFPK 48


>sp|RL37A_METM6|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 1 QCPKCRFPK 9
+CP C FPK
Sbjct: 40 KCPVCAFPK 48


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 CPKCR 6
CP+CR
Sbjct: 171 CPRCR 175


>sp|RL37A_METVS|LARGE ribosomal subunit protein eL43|Methanococcus vannielii (strain

Query: 1 QCPKCRFPK 9
+CP C FPK
Sbjct: 40 KCPVCAFPK 48


>sp|RL37A_METM5|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 1 QCPKCRFPK 9
+CP C FPK
Sbjct: 40 KCPVCAFPK 48


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CPKCR 6
CP+CR
Sbjct: 175 CPRCR 179


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPKCR 6
CP+CR
Sbjct: 171 CPRCR 175


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 205 CRRCKVPRT 213


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 171 CPKCGKP 177


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 171 CPKCGKP 177


>sp|Y819_METVS|UPF0212 protein Mevan_0819|Methanococcus vannielii (strain ATCC 35089

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|Y753_METM7|UPF0212 protein MmarC7_0753|Methanococcus maripaludis (strain C7 /

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|Y273_META3|UPF0212 protein Maeo_0273|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|Y1509_METMP|UPF0212 protein MMP1509|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|Y1509_METMI|UPF0212 protein in gatA 3'region|Methanococcus maripaludis (Methanococcus

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|Y1165_METM6|UPF0212 protein MmarC6_1165|Methanococcus maripaludis (strain C6 /

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|Y068_METM5|UPF0212 protein MmarC5_0068|Methanococcus maripaludis (strain C5 /

Query: 2 CPKCRFP 8
CPKC P
Sbjct: 52 CPKCGEP 58


>sp|RL37A_PYRIL|LARGE ribosomal subunit protein eL43|Pyrobaculum islandicum (strain DSM

Query: 1 QCPKCRF 7
QCPKC F
Sbjct: 58 QCPKCGF 64


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 205 CRRCKVPRT 213


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 QCPKCR 6
+CPKC+
Sbjct: 356 KCPKCK 361


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 QCPKCR 6
+CPKC+
Sbjct: 1059 RCPKCK 1064


Query: 1 QCPKC 5
+CPKC
Sbjct: 643 RCPKC 647


Query: 2 CPKC 5
CPKC
Sbjct: 683 CPKC 686


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 QCPKCRF 7
CPKC F
Sbjct: 250 HCPKCGF 256


>sp|RL37A_METJA|LARGE ribosomal subunit protein eL43|Methanocaldococcus jannaschii

Query: 1 QCPKCRFPK 9
+CP C FPK
Sbjct: 38 KCPVCGFPK 46


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 1 QCPKCRFPK 9
CP+C F K
Sbjct: 250 HCPRCGFRK 258


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 205 CRRCKVPRT 213


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 205 CRRCKVPRT 213


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 2 CPKCRFPKT 10
C +C+ P+T
Sbjct: 205 CRRCKVPRT 213


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKCR 6
CPKC+
Sbjct: 57 CPKCK 61


>sp|Y781_SACS2|UPF0148 protein SSO0781|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|Y1488_SACI1|UPF0148 protein YN1551_1488|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|Y1455_SACI2|UPF0148 protein LS215_1455|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|Y1409_SACI3|UPF0148 protein M1627_1409|Saccharolobus islandicus (strain M.16.27)

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|Y1359_SACI4|UPF0148 protein M1425_1359|Saccharolobus islandicus (strain M.14.25 /

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|Y1353_SACI7|UPF0148 protein YG5714_1353|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|Y1351_SACI6|UPF0148 protein M164_1351|Saccharolobus islandicus (strain M.16.4 /

Query: 2 CPKCRFP 8
CP C+ P
Sbjct: 27 CPICKMP 33


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QCPKC 5
+CPKC
Sbjct: 977 KCPKC 981


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 QCPKC 5
+CPKC
Sbjct: 350 KCPKC 354


>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 1 QCPKC 5
+CPKC
Sbjct: 136 KCPKC 140


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QCPKC 5
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 127 KCPKC 131


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QCPKC 5
+CPKC
Sbjct: 19 KCPKC 23


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 QCPKC 5
+CPKC
Sbjct: 358 KCPKC 362


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 QCPKC 5
+CPKC
Sbjct: 1178 KCPKC 1182


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 QCPKCRF 7
+CP+C F
Sbjct: 245 ECPRCGF 251


>sp|HYPA_METVS|HYDROGENASE maturation factor HypA|Methanococcus vannielii (strain ATCC 35089

Query: 1 QCPKC 5
+CPKC
Sbjct: 96 KCPKC 100


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 QCPKC 5
+CPKC
Sbjct: 714 KCPKC 718


Query: 1 QCPKC 5
+CPKC
Sbjct: 1620 KCPKC 1624


Query: 1 QCPKC 5
+CPKC
Sbjct: 758 RCPKC 762


Query: 1 QCPKC 5
CPKC
Sbjct: 739 HCPKC 743


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QCPKC 5
+CPKC
Sbjct: 703 KCPKC 707


Query: 2 CPKC 5
CPKC
Sbjct: 729 CPKC 732


Query: 2 CPKC 5
CPKC
Sbjct: 748 CPKC 751


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QCPKC 5
+CPKC
Sbjct: 127 RCPKC 131


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QCPKC 5
+CPKC
Sbjct: 129 RCPKC 133


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 QCPKC 5
+CPKC
Sbjct: 18 RCPKC 22


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QCPKC 5
+CPKC
Sbjct: 22 RCPKC 26


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 355 RCPKC 359


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 QCPKC 5
+CPKC
Sbjct: 323 RCPKC 327


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 QCPKC 5
+CPKC
Sbjct: 155 RCPKC 159


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 705 KCPKC 709


Query: 2 CPKC 5
CPKC
Sbjct: 750 CPKC 753


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 2 CPKCRFPKT 10
C +C+ P T
Sbjct: 102 CSECKLPDT 110


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKCR 6
CP CR
Sbjct: 531 CPNCR 535


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CPKCR 6
CP CR
Sbjct: 9 CPNCR 13


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPKCR 6
CP CR
Sbjct: 9 CPNCR 13


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 QCPKC 5
+CPKC
Sbjct: 95 ECPKC 99


Query: 2 CPKCRF 7
CP+C F
Sbjct: 73 CPECGF 78


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 QCPKC 5
+CPKC
Sbjct: 702 KCPKC 706


Query: 2 CPKC 5
CPKC
Sbjct: 747 CPKC 750


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CPKCR 6
CPKC+
Sbjct: 128 CPKCK 132


>sp|SUI1_METB6|PROTEIN translation factor SUI1 homolog|Methanoregula boonei (strain DSM

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 6 CPTCGLPK 13


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 QCPKCRF 7
+CPKC +
Sbjct: 383 KCPKCGY 389


Query: 2 CPKC 5
CPKC
Sbjct: 366 CPKC 369


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 CPKCRFPKT 10
C +C P+T
Sbjct: 176 CRRCNVPRT 184


>sp|SUI1_METMJ|PROTEIN translation factor SUI1 homolog|Methanoculleus marisnigri (strain

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 6 CPTCGLPK 13


>sp|HYPA_METM6|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C6 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 96 RCPKC 100


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 QCPKCRF 7
+CPKC +
Sbjct: 390 KCPKCGY 396


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 CPKCR 6
CP CR
Sbjct: 625 CPSCR 629


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 QCPKC 5
CPKC
Sbjct: 355 HCPKC 359


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 QCPKC 5
CPKC
Sbjct: 355 HCPKC 359


>sp|Y2370_ARCFU|UPF0148 protein AF_2370|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPKCRFP 8
CP+C+ P
Sbjct: 32 CPECKMP 38


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19

Query: 1 QCPKCR 6
+CP+CR
Sbjct: 17 ECPECR 22


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 1 QCPKCRF 7
QCPKC +
Sbjct: 236 QCPKCLY 242


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 QCPKC 5
+CPKC
Sbjct: 383 RCPKC 387


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 1 QCPKCRFPKT 10
+CPKC T
Sbjct: 689 KCPKCNSKTT 698


Query: 2 CPKC 5
CPKC
Sbjct: 1080 CPKC 1083


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 2 CPKCRF 7
CPKC F
Sbjct: 251 CPKCGF 256


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 QCPKC 5
+CPKC
Sbjct: 150 KCPKC 154


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 QCPKC 5
+CPKC
Sbjct: 1070 KCPKC 1074


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 465 ECPKC 469


>sp|SUI1_METJA|PROTEIN translation factor SUI1 homolog|Methanocaldococcus jannaschii

Query: 2 CPKCRFPK 9
CP+C PK
Sbjct: 6 CPRCGLPK 13


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QCPKC 5
+CPKC
Sbjct: 649 KCPKC 653


>sp|SCAF_METJA|DUF35 domain-containing scaffold protein|Methanocaldococcus jannaschii

Query: 2 CPKCR 6
CPKCR
Sbjct: 44 CPKCR 48


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPKCR 6
CPKC+
Sbjct: 124 CPKCQ 128


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKC 5
CPKC
Sbjct: 151 CPKC 154


>sp|Y068_METJA|UPF0212 protein MJ0068|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKC 5
CPKC
Sbjct: 52 CPKC 55


>sp|THIRX_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 2 CPKC 5
CPKC
Sbjct: 15 CPKC 18


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 CPKC 5
CPKC
Sbjct: 126 CPKC 129


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 CPKC 5
CPKC
Sbjct: 206 CPKC 209


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 CPKC 5
CPKC
Sbjct: 215 CPKC 218


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 2 CPKC 5
CPKC
Sbjct: 738 CPKC 741


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPKC 5
CPKC
Sbjct: 598 CPKC 601


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 2 CPKC 5
CPKC
Sbjct: 356 CPKC 359


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPKC 5
CPKC
Sbjct: 359 CPKC 362


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 2 CPKC 5
CPKC
Sbjct: 355 CPKC 358


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 2 CPKC 5
CPKC
Sbjct: 354 CPKC 357


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 CPKC 5
CPKC
Sbjct: 355 CPKC 358


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 2 CPKC 5
CPKC
Sbjct: 110 CPKC 113


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 2 CPKC 5
CPKC
Sbjct: 110 CPKC 113


>sp|HYPA_THEGJ|HYDROGENASE maturation factor HypA|Thermococcus gammatolerans (strain DSM 15229

Query: 2 CPKC 5
CPKC
Sbjct: 110 CPKC 113


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPKC 5
CPKC
Sbjct: 110 CPKC 113


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 CPKC 5
CPKC
Sbjct: 635 CPKC 638


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 2 CPKCR 6
CPKCR
Sbjct: 144 CPKCR 148


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 CPKCRF 7
CPKC +
Sbjct: 401 CPKCGY 406


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QCPKC 5
+CPKC
Sbjct: 110 KCPKC 114


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QCPKC 5
+CPKC
Sbjct: 149 RCPKC 153


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QCPKC 5
+CPKC
Sbjct: 149 KCPKC 153


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 CPKCR 6
CPKC+
Sbjct: 128 CPKCK 132


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 2 CPKCR 6
CP+CR
Sbjct: 206 CPRCR 210


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 QCPKC 5
+CPKC
Sbjct: 351 RCPKC 355


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain DSM

Query: 2 CPKC 5
CPKC
Sbjct: 1044 CPKC 1047


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 146 RCPKC 150


>sp|HYPA_METM7|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C7 /

Query: 2 CPKC 5
CPKC
Sbjct: 97 CPKC 100


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 QCPKC 5
+CPKC
Sbjct: 355 KCPKC 359


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 QCPKC 5
+CPKC
Sbjct: 153 RCPKC 157


>sp|HYPA_METMP|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPKC 5
CPKC
Sbjct: 97 CPKC 100


>sp|HYPA_METM5|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C5 /

Query: 2 CPKC 5
CPKC
Sbjct: 97 CPKC 100


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 2 CPKC 5
CPKC
Sbjct: 128 CPKC 131


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 CPKC 5
CPKC
Sbjct: 686 CPKC 689


Query: 2 CPKC 5
CPKC
Sbjct: 1076 CPKC 1079


>sp|IF2B_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 105 CPECGKPDT 113


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CPKC 5
CPKC
Sbjct: 189 CPKC 192


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKC 5
CPKC
Sbjct: 412 CPKC 415


>sp|IF2B_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 105 CPECGKPDT 113


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 2 CPKCR 6
CP CR
Sbjct: 28 CPSCR 32


>sp|SUI1_METBF|PROTEIN translation factor SUI1 homolog|Methanosarcina barkeri (strain

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 6 CPVCGLPK 13


>sp|SUI1_METAC|PROTEIN translation factor SUI1 homolog|Methanosarcina acetivorans

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 6 CPVCGLPK 13


>sp|HYPA_METJA|HYDROGENASE maturation factor HypA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CPKCR 6
CPKC+
Sbjct: 97 CPKCK 101


>sp|SUI1_METMA|PROTEIN translation factor SUI1 homolog|Methanosarcina mazei (strain ATCC

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 6 CPVCGLPK 13


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 CPKC 5
CPKC
Sbjct: 692 CPKC 695


Query: 2 CPKC 5
CPKC
Sbjct: 1082 CPKC 1085


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CPKC 5
CPKC
Sbjct: 432 CPKC 435


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CPKC-RF 7
CPKC RF
Sbjct: 131 CPKCNRF 137


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKC 5
CPKC
Sbjct: 139 CPKC 142


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 CPKC 5
CPKC
Sbjct: 685 CPKC 688


Query: 2 CPKC 5
CPKC
Sbjct: 1075 CPKC 1078


>sp|RL37_METMA|LARGE ribosomal subunit protein eL37|Methanosarcina mazei (strain ATCC

Query: 1 QCPKCRFPKT 10
QC C F KT
Sbjct: 33 QCTSCGFGKT 42


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 2 CPKC 5
CPKC
Sbjct: 115 CPKC 118


>sp|RL37_METBF|LARGE ribosomal subunit protein eL37|Methanosarcina barkeri (strain

Query: 1 QCPKCRFPKT 10
QC C F KT
Sbjct: 33 QCTSCGFGKT 42


>sp|IF2B_META3|TRANSLATION initiation factor 2 subunit|Methanococcus aeolicus (strain ATCC

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 106 CPECGKPDT 114


>sp|KAD_PYRFU|ADENYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CPKC 5
CPKC
Sbjct: 128 CPKC 131


>sp|RL37_METAC|LARGE ribosomal subunit protein eL37|Methanosarcina acetivorans (strain

Query: 1 QCPKCRFPKT 10
QC C F KT
Sbjct: 33 QCTSCGFGKT 42


>sp|SUI1_ARCFU|PROTEIN translation factor SUI1 homolog|Archaeoglobus fulgidus (strain

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 5 CPVCGLPK 12


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 QCPKCRFP 8
+CPKC P
Sbjct: 313 KCPKCGGP 320


>sp|TFE_NANEQ|TRANSCRIPTION factor E|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 CPKC 5
CPKC
Sbjct: 109 CPKC 112


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 1 QCPKCRFPKT 10
+CP C P T
Sbjct: 107 KCPVCEAPDT 116


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 610 KCPKC 614


>sp|IF2B_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 CPKCRFPKT 10
CP+C P T
Sbjct: 104 CPECGKPDT 112


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QCPKC 5
+CPKC
Sbjct: 605 KCPKC 609


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 CPKCRFPK 9
CP C F K
Sbjct: 143 CPYCGFEK 150


>sp|RL37A_PYRAE|LARGE ribosomal subunit protein eL43|Pyrobaculum aerophilum (strain

Query: 1 QCPKCRF 7
+CPKC F
Sbjct: 58 RCPKCGF 64


>sp|SUI1_METKA|PROTEIN translation factor SUI1 homolog|Methanopyrus kandleri (strain

Query: 2 CPKCRFPK 9
CP C PK
Sbjct: 7 CPVCGLPK 14


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 1 QCPKC 5
+CPKC
Sbjct: 108 KCPKC 112


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPKCRFPK 9
C KC F K
Sbjct: 314 CSKCNFCK 321


>sp|RL37A_PYRNV|LARGE ribosomal subunit protein eL43|Pyrobaculum neutrophilum (strain

Query: 1 QCPKCRF 7
+CPKC F
Sbjct: 58 KCPKCGF 64


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QCPKC 5
+CPKC
Sbjct: 27 KCPKC 31


>sp|RL37_NITMS|LARGE ribosomal subunit protein eL37|Nitrosopumilus maritimus (strain

Query: 1 QCPKCRFPK 9
QC C FP+
Sbjct: 34 QCASCGFPE 42


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QCPKC 5
+CPKC
Sbjct: 10 KCPKC 14


>sp|RL44E_DESA1|LARGE ribosomal subunit protein eL42|Desulfurococcus amylolyticus

Query: 2 CPKCR 6
CPKCR
Sbjct: 18 CPKCR 22




33|SequenceR|170|161|SEAEYQCPKC

>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 2 EAEYQCPKC 10
E E++CPKC
Sbjct: 132 ENEFKCPKC 140


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 389 YKCPKC 394


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 382 YKCPKC 387


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EAEYQCPKC 10
E E++CPKC
Sbjct: 132 ENEFKCPKC 140


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 244 YECPKC 249


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 SEAE---YQCPKC 10
S+AE Y CPKC
Sbjct: 739 SQAEGYSYSCPKC 751


Query: 3 AEYQCPKC 10
A ++CPKC
Sbjct: 700 AFFKCPKC 707


Query: 1 SEAEYQCPKC 10
+ E++C KC
Sbjct: 1115 TRQEFRCVKC 1124


>sp|YI48_METSM|INSERTION element ISM1 uncharacterized 48.3|Methanobrevibacter smithii

Query: 2 EAEYQCPKC 10
E +YQC KC
Sbjct: 96 EQQYQCKKC 104


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 757 YRCPKC 762


Query: 3 AEYQCPKC 10
A ++CPKC
Sbjct: 711 AFFKCPKC 718


Query: 2 EAEYQCPKC 10
E + CPKC
Sbjct: 735 ELLWHCPKC 743


Query: 1 SEAEYQCPKC 10
+ E++C KC
Sbjct: 1599 TRQEFRCVKC 1608


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 2 EAEYQCPKC 10
E E++CPKC
Sbjct: 142 EHEFRCPKC 150


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 SEAE---YQCPKC 10
S+AE Y CPKC
Sbjct: 741 SQAEGYNYTCPKC 753


Query: 3 AEYQCPKC 10
A ++CPKC
Sbjct: 702 AFFKCPKC 709


Query: 1 SEAEYQCPKC 10
+ E++C KC
Sbjct: 1302 TRQEFRCVKC 1311


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 4 EYQCPKC 10
+Y+CPKC
Sbjct: 321 KYRCPKC 327


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 1 SEAEYQCPKC 10
S EY CP C
Sbjct: 289 SGTEYTCPGC 298


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 4 EYQCPKC 10
+++CPKC
Sbjct: 381 DFRCPKC 387


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 6 QCPKC 10
QCPKC
Sbjct: 708 QCPKC 712


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EAEYQCPKC 10
+A Y CPKC
Sbjct: 146 KAYYICPKC 154


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 5 YQCPKC 10
+QCPKC
Sbjct: 235 HQCPKC 240


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 745 YTCPKC 750


Query: 3 AEYQCPKC 10
A ++CPKC
Sbjct: 699 ALFKCPKC 706


Query: 1 SEAEYQCPKC 10
+ E++C KC
Sbjct: 1280 TRQEFRCVKC 1289


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 SEAEYQCPKC 10
S+ ++CPKC
Sbjct: 1054 SKQAFRCPKC 1063


Query: 1 SEAEYQCPKC 10
++A Y+CP C
Sbjct: 663 TDAVYRCPHC 672


>sp|Y748_METKA|UPF0212 protein MK0748|Methanopyrus kandleri (strain AV19 /

Query: 5 YQCPKC 10
Y+CP+C
Sbjct: 55 YECPEC 60


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 204 YWCPKC 209


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 207 YYCPKC 212


>sp|SYV_SULTO|VALINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 187 YWCPKC 192


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 5 YQCPKC 10
Y+CP+C
Sbjct: 374 YRCPRC 379


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 124 YICPKC 129


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EAEYQCPKC 10
E ++CP C
Sbjct: 496 EVRFKCPTC 504


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain AV19

Query: 2 EAEYQCPKC 10
EAE +CP C
Sbjct: 427 EAEGECPVC 435


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EAEYQCPKC 10
E E+QCP C
Sbjct: 132 EYEFQCPIC 140


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 6 QCPKC 10
QCP+C
Sbjct: 183 QCPRC 187


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 6 QCPKC 10
QCP+C
Sbjct: 183 QCPRC 187


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 169 YWCPKC 174


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EAEYQCPKC 10
E ++CPKC
Sbjct: 6 EKRWKCPKC 14


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 169 YWCPKC 174


>sp|RL37A_PYRIL|LARGE ribosomal subunit protein eL43|Pyrobaculum islandicum (strain DSM

Query: 5 YQCPKC 10
+QCPKC
Sbjct: 57 WQCPKC 62


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YQCPKC 10
++CPKC
Sbjct: 648 WKCPKC 653


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 5 YQCPKC 10
Y CP+C
Sbjct: 180 YWCPRC 185


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 6 QCPKC 10
QCP+C
Sbjct: 183 QCPRC 187


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 1 SEAEYQCPKC 10
S+ E+ CP C
Sbjct: 129 SKCEFMCPAC 138


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 3 AEYQCPKC 10
E QCP C
Sbjct: 624 GERQCPAC 631


Query: 5 YQCPKC 10
++CP+C
Sbjct: 650 FRCPRC 655


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YQCPKC 10
Y CP+C
Sbjct: 179 YWCPRC 184


>sp|SYI_METMP|ISOLEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 YQCPKC 10
Y CP+C
Sbjct: 179 YWCPRC 184


>sp|TFE_SACS2|TRANSCRIPTION factor E|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EAEYQCPKC 10
+ Y+CP C
Sbjct: 194 KVSYKCPHC 202


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 5 YQCPKC 10
Y CP+C
Sbjct: 128 YTCPRC 133


Query: 4 EYQCPKC 10
++ CP+C
Sbjct: 146 DFTCPRC 152


>sp|TFE_PYRCJ|TRANSCRIPTION factor E|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EAEYQCPKC 10
EA Y CP C
Sbjct: 117 EAFYVCPNC 125


>sp|RS34_SACS2|SMALL ribosomal subunit protein aS34|Saccharolobus solfataricus (strain

Query: 1 SEAEYQCPKC 10
++ Y+CPKC
Sbjct: 32 TDILYKCPKC 41


>sp|PRIL_THEVO|DNA primase large subunit PriL|Thermoplasma volcanium (strain ATCC

Query: 1 SEAEYQCPKC 10
S EY PKC
Sbjct: 281 SGVEYSPPKC 290


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 331 YKCPTC 336


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 5 YQCPKC 10
Y CP C
Sbjct: 235 YHCPSC 240


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 EAEYQCPKC 10
+ EY+ PKC
Sbjct: 348 KVEYRKPKC 356


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 SEAEYQCPKC 10
+E Y CP C
Sbjct: 670 TEQLYYCPSC 679


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 SEAEYQCPKC 10
S EY PKC
Sbjct: 292 SGTEYTPPKC 301


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 6 QCPKC 10
QCPKC
Sbjct: 236 QCPKC 240


>sp|TFE_SACI1|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 331 YRCPTC 336


>sp|TFE_SACI7|TRANSCRIPTION factor E|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|TFE_SACI6|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|TFE_SACI4|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|TFE_SACI3|TRANSCRIPTION factor E|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|TFE_SACI2|TRANSCRIPTION factor E|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 131 ENEFKCLKC 139


>sp|AMZA_PYRAE|ARCHAEMETZINCIN aerophilum (strain ATCC 51768

Query: 2 EAEYQCPKC 10
++ Y CPKC
Sbjct: 139 KSPYFCPKC 147


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 137 YICPKC 142


>sp|RL37A_PICTO|LARGE ribosomal subunit protein eL43|Picrophilus torridus (strain ATCC

Query: 2 EAEYQCPKC 10
+A Y CPKC
Sbjct: 34 KAYYVCPKC 42


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 AEYQCPKC 10
A Y CP C
Sbjct: 117 AFYNCPNC 124


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 YQCPKC 10
Y CP+C
Sbjct: 169 YWCPRC 174


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 6 QCPKC 10
QCP C
Sbjct: 236 QCPNC 240


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 5 YQCPKC 10
Y CP C
Sbjct: 169 YYCPNC 174


>sp|RL37A_METM7|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 EAEYQCPKC 10
+ EY+CP C
Sbjct: 36 KKEYKCPVC 44


>sp|RL37A_METM6|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 EAEYQCPKC 10
+ EY+CP C
Sbjct: 36 KKEYKCPVC 44


>sp|Z143_THEKO|ZINC-FINGER protein TK0143|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EAEYQCPKC 10
E ++CP+C
Sbjct: 15 EILFRCPRC 23


>sp|RS21_SACS2|SMALL ribosomal subunit protein aS21|Saccharolobus solfataricus (strain

Query: 3 AEYQCPKC 10
AEY CP C
Sbjct: 53 AEYICPNC 60


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 4 EYQCPKC 10
E++C KC
Sbjct: 999 EFRCTKC 1005


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 EYQCPKC 10
E++C KC
Sbjct: 994 EFRCTKC 1000


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 4 EYQCPKC 10
E++C KC
Sbjct: 992 EFRCTKC 998


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 YQCPKC 10
Y CP+C
Sbjct: 169 YWCPRC 174


>sp|RL37A_METVS|LARGE ribosomal subunit protein eL43|Methanococcus vannielii (strain

Query: 4 EYQCPKC 10
EY+CP C
Sbjct: 38 EYKCPVC 44


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 6 QCPKC 10
QCPKC
Sbjct: 360 QCPKC 364


>sp|RL37A_METM5|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 4 EYQCPKC 10
EY+CP C
Sbjct: 38 EYKCPVC 44


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 SEAEYQCPKC 10
+E Y CP C
Sbjct: 736 TEPVYVCPDC 745


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EAEYQCPKC 10
E + CP+C
Sbjct: 134 ELNFTCPRC 142


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 327 YKCPVC 332


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 4 EYQCPK 9
EY CPK
Sbjct: 458 EYACPK 463


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 SEAEYQCPKC 10
S EY P C
Sbjct: 300 SPTEYTAPSC 309


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 1 SEAEYQCPKC 10
S EY P C
Sbjct: 300 SPTEYTAPSC 309


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YQCPKC 10
Y CP C
Sbjct: 529 YLCPNC 534


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 5 YQCPKC 10
Y CP C
Sbjct: 14 YLCPNC 19


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 4 EYQCPKC 10
EY+ PKC
Sbjct: 350 EYRKPKC 356


>sp|HYPA_THESM|HYDROGENASE maturation factor HypA|Thermococcus sibiricus (strain DSM 12597

Query: 2 EAEYQCPKC 10
EAE++C C
Sbjct: 68 EAEFKCRNC 76


>sp|TF2B2_THEVO|TRANSCRIPTION initiation factor IIB 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SEAEYQCPKC 10
SEA +CP+C
Sbjct: 11 SEAPKRCPEC 20


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 QCPKC 10
QCP+C
Sbjct: 152 QCPRC 156


>sp|Y1033_METBU|UPF0179 protein Mbur_1033|Methanococcoides burtonii (strain DSM 6242

Query: 1 SEAEYQCPKC 10
S+ YQ PKC
Sbjct: 92 SKIRYQAPKC 101


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 3 AEYQCPK 9
A ++CPK
Sbjct: 510 AHFECPK 516


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 YQCPKC 10
Y+C KC
Sbjct: 19 YKCKKC 24


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 3 AEYQCP 8
AEY CP
Sbjct: 113 AEYWCP 118


>sp|RS21_THEKO|SMALL ribosomal subunit protein aS21|Thermococcus kodakarensis (strain

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 52 YKCPKC 57


>sp|TFE_METTH|TRANSCRIPTION factor E|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SEAEYQCPKC 10
+E + CP+C
Sbjct: 131 TEENFTCPEC 140


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 YQCPKC 10
Y+C KC
Sbjct: 128 YRCSKC 133


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 5 YQCPKC 10
Y CPKC
Sbjct: 113 YVCPKC 118


>sp|TFE_CENSY|TRANSCRIPTION factor E|Cenarchaeum symbiosum (strain A)

Query: 2 EAEYQCPKC 10
E ++CP C
Sbjct: 132 EEMFKCPSC 140


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EAEYQCPKC 10
+ Y+CP C
Sbjct: 456 DGTYKCPIC 464


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 5 YQCPKC 10
Y+C KC
Sbjct: 128 YRCSKC 133


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 YQCPKC 10
++CP C
Sbjct: 138 FECPNC 143


>sp|RS21_THECE|SMALL ribosomal subunit protein aS21|Thermococcus celer

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 49 YKCPKC 54


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 5 YQCPKC 10
Y CP C
Sbjct: 328 YTCPAC 333


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 SEAEYQCPKC 10
S+ +++C KC
Sbjct: 1200 SKQKFRCTKC 1209


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 19 YKCPYC 24


>sp|RL37A_PYRAE|LARGE ribosomal subunit protein eL43|Pyrobaculum aerophilum (strain

Query: 5 YQCPKC 10
++CPKC
Sbjct: 57 WRCPKC 62


>sp|RS21_METJA|SMALL ribosomal subunit protein aS21|Methanocaldococcus jannaschii

Query: 5 YQCPKC 10
Y+CPKC
Sbjct: 47 YKCPKC 52


>sp|RPO12_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrococcus abyssi (strain GE5 /

Query: 2 EAEYQCPKC 10
EA Y+C KC
Sbjct: 3 EAIYRCAKC 11


>sp|RPO12_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrococcus horikoshii (strain ATCC

Query: 2 EAEYQCPKC 10
EA Y+C KC
Sbjct: 3 EAVYRCAKC 11


>sp|TFE_METM5|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C5 /

Query: 2 EAEYQCPKC 10
++ ++CP+C
Sbjct: 131 DSGFRCPQC 139


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 2 EAEYQCPKC 10
++ ++CP+C
Sbjct: 131 DSGFRCPQC 139


>sp|RL37A_PYRNV|LARGE ribosomal subunit protein eL43|Pyrobaculum neutrophilum (strain

Query: 5 YQCPKC 10
++CPKC
Sbjct: 57 WKCPKC 62


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 2 EAEYQCPKC 10
++ ++CP+C
Sbjct: 131 DSGFRCPQC 139


>sp|TFE_PYRAR|TRANSCRIPTION factor E|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 AEYQCPKC 10
A Y CP C
Sbjct: 118 AYYICPSC 125


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 5 YQCPKC 10
++CP+C
Sbjct: 134 FRCPQC 139


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 5 YQCPKC 10
Y+C KC
Sbjct: 393 YKCDKC 398


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 5 YQCPKC 10
Y+C KC
Sbjct: 242 YECSKC 247


>sp|TFE_PYRNV|TRANSCRIPTION factor E|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 AEYQCPKC 10
A Y CP C
Sbjct: 118 AYYVCPTC 125


>sp|RL37A_SACS2|LARGE ribosomal subunit protein eL43|Saccharolobus solfataricus (strain

Query: 4 EYQCPKC 10
E+QCP C
Sbjct: 33 EHQCPYC 39


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 35 YRCPIC 40


>sp|TFE_SULAC|TRANSCRIPTION factor E|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EAEYQCPKC 10
E E++C KC
Sbjct: 124 ENEFKCLKC 132


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 5 YQCPKC 10
++CP+C
Sbjct: 136 FECPEC 141


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 35 YRCPIC 40


>sp|RS21_HALVD|SMALL ribosomal subunit protein aS21|Haloferax volcanii (strain ATCC

Query: 1 SEAEYQCPKC 10
S A ++CP C
Sbjct: 23 SAATFKCPDC 32


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 35 YRCPIC 40


>sp|TFE_HALMA|TRANSCRIPTION factor E|Haloarcula marismortui (strain ATCC 43049

Query: 2 EAEYQCPKC 10
E ++CP+C
Sbjct: 133 EFGFECPEC 141


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 5 YQCPKC 10
Y+CP C
Sbjct: 5 YKCPVC 10




34|SequenceR|175|166|VFQEESEAEY

>sp|IDI2_SACI3|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.27)

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACI7|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACI6|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACI4|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACI2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACI1|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACSH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|IDI2_SACS2|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VFQEESEAEY 10
VFQ E E EY
Sbjct: 162 VFQPEGEPEY 171


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 3 QEESEAE 9
Q+ESEAE
Sbjct: 291 QDESEAE 297


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 1 VFQEESEAE 9
+F+EE EAE
Sbjct: 149 IFEEEYEAE 157


>sp|IDI2_METS5|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VFQEESEAEY 10
+FQ E E EY
Sbjct: 160 LFQPEGEPEY 169




35|SequenceR|180|171|VRIHHVFQEE

>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 3 IHHVFQEE 10
I+HVF EE
Sbjct: 8 INHVFDEE 15


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 1 VRIHHVFQEE 10
+ I+H+F EE
Sbjct: 6 IDINHIFDEE 15


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 RIHHVFQEE 10
++HH F++E
Sbjct: 563 KLHHEFKDE 571


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 RIHHVFQEE 10
++HH F++E
Sbjct: 563 KLHHEFKDE 571


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 RIHHVFQEE 10
++HH F++E
Sbjct: 563 KLHHEFKDE 571


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 2 RIHHVFQEE 10
++HH F++E
Sbjct: 563 KLHHEFRDE 571


>sp|DPCKG_METJA|GTP-DEPENDENT dephospho-CoA kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VRIHHVFQE 9
V+I+HVF++
Sbjct: 63 VKINHVFKK 71


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 VRIHHVFQEE 10
VRIH + EE
Sbjct: 105 VRIHEIHVEE 114


>sp|G3PP_METTH|GLYCERALDEHYDE 3-phosphate phosphatase|Methanothermobacter thermautotrophicus

Query: 3 IHHVFQE 9
IHH F E
Sbjct: 133 IHHFFDE 139


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HHVFQEE 10
HH+F+E+
Sbjct: 706 HHIFKEK 712




36|SequenceR|185|176|KKASHVRIHH

***** No hits found ******


37|SequenceR|190|181|EEVFFKKASH

>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EEVFFKKAS 9
E FF+KAS
Sbjct: 32 ETAFFEKAS 40


>sp|RL11_METS3|LARGE ribosomal subunit protein uL11|Methanobrevibacter smithii (strain

Query: 1 EEVFFKKASH 10
EE+ +KASH
Sbjct: 79 EELGIEKASH 88


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 2 EVFFKKA 8
EVFF KA
Sbjct: 436 EVFFNKA 442


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 EEVFFKKASH 10
EEVF K H
Sbjct: 501 EEVFIKSLRH 510




38|SequenceR|195|186|QKEASEEVFF

>sp|QOX2_SULAC|QUINOL oxidase subunit 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KEASEEVFF 10
KE +EEV+F
Sbjct: 4 KEHAEEVWF 12


>sp|IF6_METMA|TRANSLATION initiation factor 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QKEASEEVF 9
++EA EE+F
Sbjct: 162 EREALEEIF 170




39|SequenceR|200|191|ERAKAQKEAS

>sp|DNAK_METBU|CHAPERONE protein DnaK|Methanococcoides burtonii (strain DSM 6242

Query: 4 KAQKEAS 10
KAQKEAS
Sbjct: 579 KAQKEAS 585




40|SequenceR|205|196|TSSGSERAKA

>sp|THSA_METTH|CHAPERONIN subunit alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TSSGSERAK 9
T GSERAK
Sbjct: 160 TGKGSERAK 168




41|SequenceR|210|201|DGEEATSSGS

>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGEEATSSGS 10
DGE+ SGS
Sbjct: 311 DGEDVIISGS 320




42|SequenceR|215|206|PGKSFDGEEA

>sp|ILVD_PICTO|DIHYDROXY-ACID dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 PGKSFDGEEA 10
P K FDGEEA
Sbjct: 402 PAKVFDGEEA 411


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PGKSFDG 7
PG++FDG
Sbjct: 252 PGQAFDG 258


>sp|G1PDH_HYPBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Hyperthermus butylicus (strain DSM 5456

Query: 1 PGKSFDGEE 9
PGK+ GEE
Sbjct: 260 PGKALHGEE 268


>sp|CBSA_SULAC|CYTOCHROME b558/566 subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PGKSFDG 7
PG+ FDG
Sbjct: 243 PGQQFDG 249


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 PGKSFDGEE 9
PGK+FD ++
Sbjct: 80 PGKAFDTDK 88


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGKSFDGEE 9
P K FD EE
Sbjct: 401 PAKVFDSEE 409


>sp|TRUD_PYRFU|PROBABLE tRNA pseudouridine synthase D|Pyrococcus furiosus (strain ATCC

Query: 1 PGKSFDGEEA 10
PGK +G+EA
Sbjct: 191 PGKGMEGDEA 200


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 PGKSFD 6
PGK+FD
Sbjct: 80 PGKAFD 85


>sp|G1PDH_STAMF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Staphylothermus marinus (strain ATCC 43588

Query: 1 PGKSFDGEE 9
PGK+ GE+
Sbjct: 266 PGKALHGEQ 274


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PGKSFDGEE 9
PGK +DG E
Sbjct: 361 PGKFYDGLE 369


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGKSFDGEE 9
PGK +DG E
Sbjct: 359 PGKFYDGLE 367


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 1 PGKSFDG 7
PG+S DG
Sbjct: 277 PGESLDG 283


>sp|DLDH2_HALMA|DIHYDROLIPOYL dehydrogenase 2|Haloarcula marismortui (strain ATCC 43049

Query: 1 PGKSFDGE 8
PG FDGE
Sbjct: 157 PGFEFDGE 164


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 2 GKSFDG 7
GK+FDG
Sbjct: 187 GKNFDG 192


>sp|RS24_METBF|SMALL ribosomal subunit protein eS24|Methanosarcina barkeri (strain

Query: 1 PGKSFDGEEA 10
PG +GEEA
Sbjct: 92 PGMETEGEEA 101


>sp|RS24_METMA|SMALL ribosomal subunit protein eS24|Methanosarcina mazei (strain ATCC

Query: 1 PGKSFDGEEA 10
PG +GEEA
Sbjct: 92 PGSETEGEEA 101


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 PGKSFDGEE 9
PG+ +DG E
Sbjct: 359 PGRVYDGLE 367


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGKSFDGEE 9
PG+ +DG E
Sbjct: 359 PGRVYDGLE 367


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGKSFDG 7
PGK +DG
Sbjct: 361 PGKFYDG 367


>sp|TRUD_PYRAB|PROBABLE tRNA pseudouridine synthase D|Pyrococcus abyssi (strain GE5 /

Query: 1 PGKSFDGEEA 10
PG +G+EA
Sbjct: 190 PGNGMEGDEA 199


>sp|TRUD_PYRHO|PROBABLE tRNA pseudouridine synthase D|Pyrococcus horikoshii (strain ATCC

Query: 1 PGKSFDGEEA 10
PG +G+EA
Sbjct: 192 PGNGMEGDEA 201




43|SequenceR|220|211|RDCRIPGKSF

>sp|IF1A_PICTO|TRANSLATION initiation factor 1A|Picrophilus torridus (strain ATCC 700027

Query: 1 RDCRIPGK 8
R+CRIPGK
Sbjct: 45 RNCRIPGK 52


>sp|IF1A_PYRHO|TRANSLATION initiation factor 1A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RDCRIPGK 8
R CRIPGK
Sbjct: 49 RRCRIPGK 56


>sp|IF1A_PYRAB|TRANSLATION initiation factor 1A|Pyrococcus abyssi (strain GE5 /

Query: 1 RDCRIPGK 8
R CRIPGK
Sbjct: 47 RRCRIPGK 54


>sp|IF1A_PYRFU|TRANSLATION initiation factor 1A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RDCRIPGK 8
R CRIPG+
Sbjct: 49 RRCRIPGR 56


>sp|IF1A_THEKO|TRANSLATION initiation factor 1A|Thermococcus kodakarensis (strain ATCC

Query: 1 RDCRIPGK 8
R CRIPGK
Sbjct: 52 RRCRIPGK 59


>sp|IF1A_METST|TRANSLATION initiation factor 1A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RDCRIPGK 8
R CRIPGK
Sbjct: 56 RLCRIPGK 63


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 5 IPGKSF 10
IPGKSF
Sbjct: 290 IPGKSF 295


>sp|MCRB_METVA|METHYL-COENZYME M reductase subunit beta|Methanococcus vannielii

Query: 1 RDCRIPGKSF 10
+ C++PG++
Sbjct: 65 KGCKVPGRTL 74


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 DCRIPGKSF 10
D R PGK F
Sbjct: 474 DVRTPGKDF 482


>sp|Y144_METJA|UNCHARACTERIZED protein MJ0144|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DCRIPGKSF 10
DC PGK +
Sbjct: 188 DCFYPGKPY 196


>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DCRIP 6
DCR+P
Sbjct: 136 DCRVP 140


>sp|T2MW_METWO|TYPE II restriction enzyme MwoI|Methanothermobacter wolfeii

Query: 2 DCRIPGKS 9
DC+I GK+
Sbjct: 140 DCKIRGKN 147


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 3 CRIPG 7
CR+PG
Sbjct: 73 CRVPG 77




44|SequenceR|225|216|TNYGCRDCRI

>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYGCRDCR 9
N+GC DC+
Sbjct: 327 NFGCSDCK 334


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 YGCRDCRI 10
YGC DC I
Sbjct: 664 YGCPDCGI 671


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 NYGCRDC 8
+Y CRDC
Sbjct: 699 HYECRDC 705


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YGCRD 7
YGCRD
Sbjct: 430 YGCRD 434


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 NYGCRDCR 9
N+G DCR
Sbjct: 125 NHGVEDCR 132


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 TNYGCRDCR 9
T + CR CR
Sbjct: 176 TKWPCRSCR 184


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 4 GCRDCRI 10
GCR+C I
Sbjct: 106 GCRECGI 112


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 3 YGCRDC 8
YGC DC
Sbjct: 610 YGCGDC 615


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 3 YGCRDC 8
+ CRDC
Sbjct: 71 FKCRDC 76


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 TNYGCRDC 8
T GCR C
Sbjct: 201 TTIGCRRC 208


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 1 TNYGCRDC 8
T GCR C
Sbjct: 201 TTIGCRRC 208


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 TNYGCRDC 8
T GCR C
Sbjct: 202 TTIGCRRC 209


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 YGCRDC 8
YGC DC
Sbjct: 610 YGCGDC 615


>sp|PYLS_METAC|PYRROLYSINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CRDCRI 10
CR CR+
Sbjct: 69 CRHCRV 74


>sp|Y512_METJA|UNCHARACTERIZED protein MJ0512|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYGCRDCR 9
NY C+ CR
Sbjct: 125 NYYCKICR 132


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 1 TNYGCRDCR 9
TN+GC R
Sbjct: 61 TNFGCGSSR 69


>sp|RPO3_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo3|Thermoplasma volcanium (strain ATCC

Query: 2 NYGCRDCRI 10
+YGC D I
Sbjct: 211 DYGCNDLSI 219


>sp|CAS5A_SACS2|CRISPR system aCascade subunit Cas5|Saccharolobus solfataricus (strain

Query: 1 TNYGCRDC 8
T GC++C
Sbjct: 141 TRIGCKEC 148


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NYGCRDC 8
+Y C+DC
Sbjct: 419 SYVCKDC 425


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 1 TNYGCRDCR 9
+++ CR CR
Sbjct: 282 SHWDCRSCR 290


>sp|Y725_METJA|UNCHARACTERIZED protein MJ0725|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYGCRDC 8
N GCR C
Sbjct: 173 NLGCRVC 179


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain ATCC

Query: 1 TNYGCRDCR 9
T + CR+C+
Sbjct: 182 TEWPCRECK 190


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 YGCRDCRI 10
Y C DC I
Sbjct: 723 YVCYDCNI 730


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 3 YGCRDC 8
Y CR+C
Sbjct: 370 YKCREC 375


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YGCRDCRI 10
Y CR+C +
Sbjct: 119 YMCRNCSV 126


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 3 YGCRDCR 9
+GCR C+
Sbjct: 38 FGCRYCQ 44


>sp|Y309_METBU|UPF0280 protein Mbur_0309|Methanococcoides burtonii (strain DSM 6242

Query: 2 NYGCRDCRI 10
N+GC D +
Sbjct: 156 NFGCADAAV 164


>sp|Y2106_PYRCJ|UPF0179 protein Pcal_2106|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 CRDCRI 10
CR+CR+
Sbjct: 28 CRECRL 33


>sp|Y688_PYRIL|UPF0179 protein Pisl_0688|Pyrobaculum islandicum (strain DSM 4184

Query: 4 GCRDC 8
GC+DC
Sbjct: 100 GCKDC 104


>sp|Y681_PYRAE|UPF0179 protein PAE0681|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 CRDCRI 10
C+DCR+
Sbjct: 28 CKDCRL 33


>sp|Y609_METTH|UPF0179 protein MTH_609|Methanothermobacter thermautotrophicus (strain

Query: 5 CRDCR 9
CRDCR
Sbjct: 25 CRDCR 29


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain

Query: 4 GCRDCRI 10
GC+ CR+
Sbjct: 85 GCQHCRV 91


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 3 YGCRDC 8
Y CRDC
Sbjct: 409 YRCRDC 414


>sp|Y236_METTH|UNCHARACTERIZED protein MTH_236|Methanothermobacter thermautotrophicus (strain

Query: 4 GCRDC 8
GCR+C
Sbjct: 19 GCREC 23




45|SequenceR|230|221|HDYRNTNYGC

>sp|CPGS_METS3|CYCLIC 2,3-diphosphoglycerate synthetase|Methanobrevibacter smithii

Query: 2 DYRNTNYGC 10
DY TNY C
Sbjct: 363 DYLETNYNC 371


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DYRNTNYGC 10
+++NT++GC
Sbjct: 385 EFKNTSFGC 393


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DYRNTNYG 9
DY N NYG
Sbjct: 26 DYLNVNYG 33


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 2 DYRNTNYG 9
DYR T YG
Sbjct: 308 DYRETMYG 315


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 HDYRNTN 7
HD+RN N
Sbjct: 266 HDFRNEN 272


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 HDYRNTNY 8
+DY+N NY
Sbjct: 611 NDYKNCNY 618


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYRNTNYG 9
DY+N YG
Sbjct: 127 DYKNDEYG 134


>sp|BAT_HALSA|BACTERIOOPSIN transcriptional activator|Halobacterium salinarum (strain ATCC

Query: 3 YRNTNYG 9
YR+T YG
Sbjct: 408 YRSTTYG 414


>sp|TOP6B_NATPD|TYPE 2 DNA topoisomerase 6|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HDYRNTNYG 9
H+Y +TN G
Sbjct: 722 HNYGDTNVG 730


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 HDYRNTNY 8
H+Y +TN+
Sbjct: 81 HEYEDTNH 88


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 YRNTNYGC 10
+ NT +GC
Sbjct: 386 FENTAFGC 393


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 YRNTNYGC 10
+ NT +GC
Sbjct: 386 FENTAFGC 393


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 YRNTNYGC 10
+ NT +GC
Sbjct: 386 FENTAFGC 393


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 YRNTNYGC 10
+ NT +GC
Sbjct: 386 FENTAFGC 393


>sp|UVRC_HALWD|UVRABC system protein C|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HDYRNTNYGC 10
H Y N N C
Sbjct: 152 HKYNNRNRPC 161


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 2 DYRNTNY 8
DY +TNY
Sbjct: 120 DYLDTNY 126




46|SequenceR|235|226|LHATYHDYRN

>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 5 YHDYRN 10
YHD+RN
Sbjct: 265 YHDFRN 270


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LHATYHDY 8
L TYHDY
Sbjct: 1046 LSVTYHDY 1053


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 YHDYR 9
YHDYR
Sbjct: 44 YHDYR 48


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 4 TYHDYR 9
TYHD+R
Sbjct: 379 TYHDHR 384


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 TYHDYR 9
TYHD+R
Sbjct: 379 TYHDHR 384


>sp|AROA_METM6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 TYHDYR 9
TYHD+R
Sbjct: 379 TYHDHR 384


>sp|AROA_METM5|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C5 /

Query: 4 TYHDYR 9
TYHD+R
Sbjct: 379 TYHDHR 384


>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 4 TYHDYR 9
TYHD+R
Sbjct: 379 TYHDHR 384


>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 4 TYHDYR 9
TYHD+R
Sbjct: 383 TYHDHR 388


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 1 LHATYHD 7
+HA YHD
Sbjct: 121 VHAGYHD 127


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LHATYHDYRN 10
L AT+H Y N
Sbjct: 72 LEATWHAYIN 81


>sp|COBY_METJA|ADENOSYLCOBINAMIDE-PHOSPHATE guanylyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LHATYHDYRN 10
+++ Y DY+N
Sbjct: 60 INSAYKDYKN 69


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 TYHDYRN 10
+YH+Y N
Sbjct: 90 SYHEYEN 96


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 1 LHATYHDYRN 10
LH+T HD N
Sbjct: 246 LHSTVHDALN 255


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 1 LHATYHDYRN 10
LH+T HD N
Sbjct: 246 LHSTVHDALN 255


>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LHATYHDYRN 10
L+ Y D+RN
Sbjct: 111 LYVKYGDFRN 120


>sp|FTTA_METMA|TRANSCRIPTION termination factor FttA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LHATYHDYRN 10
+HAT+ +Y N
Sbjct: 454 IHATHPEYLN 463


>sp|MPTA_HALVD|GTP cyclohydrolase MptA|Haloferax volcanii (strain ATCC 29605

Query: 2 HATYHDYRN 10
H TYH + N
Sbjct: 240 HMTYHAHAN 248


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LHATYHD 7
L+ TYHD
Sbjct: 877 LYVTYHD 883


>sp|KDGA_PICTO|2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE aldolase|Picrophilus torridus (strain ATCC 700027

Query: 5 YHDYRN 10
YH+Y+N
Sbjct: 207 YHEYKN 212


>sp|SODM1_HALME|SUPEROXIDE dismutase [Mn] 1|Haloferax mediterranei (Halobacterium

Query: 2 HATYHDY 8
H+ YHDY
Sbjct: 128 HSYYHDY 134


>sp|HMED_ARCPA|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 ATYHD 7
ATYHD
Sbjct: 415 ATYHD 419


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LHATYHDYRN 10
LH +H Y N
Sbjct: 382 LHIAHHIYTN 391


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 3 ATYHD 7
ATYHD
Sbjct: 411 ATYHD 415


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LHATYHDYR 9
L TY DY+
Sbjct: 314 LRRTYEDYK 322




47|SequenceR|240|231|RTHHKLHATY

>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 RTHHKLHATY 10
R+H KL+A Y
Sbjct: 333 RSHPKLYAAY 342


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RTHHKLHATY 10
R+H KL+A Y
Sbjct: 333 RSHPKLYAAY 342


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RTHHKLHATY 10
R H KL+A Y
Sbjct: 337 RAHPKLYAAY 346


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RTHHKLHA 8
R HH +HA
Sbjct: 92 RPHHDVHA 99


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RTHHKLHATY 10
R+H KL++ Y
Sbjct: 337 RSHPKLYSAY 346


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 RTHHKLHATY 10
R+H KL++ Y
Sbjct: 337 RSHPKLYSAY 346


>sp|KAE1_METBU|TRNA N6-adenosine threonylcarbamoyltransferase|Methanococcoides

Query: 3 HHKLHAT 9
HH LHA+
Sbjct: 47 HHALHAS 53


>sp|GLNA_HALVD|GLUTAMINE synthetase|Haloferax volcanii (strain ATCC 29605

Query: 4 HKLHATY 10
H LHAT+
Sbjct: 236 HDLHATF 242


>sp|GLNA3_HALMT|GLUTAMINE synthetase 3|Haloferax mediterranei (strain ATCC 33500

Query: 4 HKLHATY 10
H LHAT+
Sbjct: 236 HDLHATF 242


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 HKLHATY 10
H LH TY
Sbjct: 164 HTLHETY 170


>sp|SODF_SULAC|SUPEROXIDE dismutase [Fe]|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HKLHATY 10
HKLHA Y
Sbjct: 82 HKLHAIY 88


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 HKLHATY 10
H LH TY
Sbjct: 164 HTLHETY 170


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 3 HHKLHA 8
HH +HA
Sbjct: 312 HHSIHA 317


>sp|SODF_SACS2|SUPEROXIDE dismutase [Fe]|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 HKLHATY 10
HKLHA Y
Sbjct: 82 HKLHALY 88


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 4 HKLHATY 10
H LH TY
Sbjct: 306 HNLHVTY 312




48|SequenceR|245|236|ENDGARTHHK

>sp|RS19_METLZ|SMALL ribosomal subunit protein uS19|Methanocorpusculum labreanum

Query: 1 ENDGARTHHK 10
E DG RTH +
Sbjct: 63 EGDGVRTHSR 72


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 2 NDGARTHH 9
+DG RT+H
Sbjct: 306 SDGPRTYH 313


>sp|PGK_METLZ|PHOSPHOGLYCERATE kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DGARTH 8
DGA+TH
Sbjct: 129 DGAKTH 134




49|SequenceR|250|241|CKYVRENDGA

>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KYVREND 8
KY REND
Sbjct: 365 KYAREND 371


>sp|PYRG_METJA|CTP synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KYVREND 8
KY REND
Sbjct: 374 KYAREND 380


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KYVRENDGA 10
KY+ EN+GA
Sbjct: 315 KYMAENEGA 323


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 2 KYVRENDGA 10
K VRE+DGA
Sbjct: 48 KLVRESDGA 56


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 3 YVRENDGA 10
Y+RE DGA
Sbjct: 405 YLREGDGA 412


>sp|SYD_PYRAB|ASPARTATE--TRNA(ASP) ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KYVRENDGA 10
KY+ EN+GA
Sbjct: 315 KYMLENEGA 323


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 2 KYVRENDGA 10
K VRE DGA
Sbjct: 48 KLVREEDGA 56


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CKYVREN-DG 9
C+Y+ EN DG
Sbjct: 216 CRYIEENYDG 225


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 2 KYVREND 8
+Y REND
Sbjct: 365 RYAREND 371


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 KYVREND 8
+Y REND
Sbjct: 365 RYAREND 371


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 KYVREND 8
+Y REND
Sbjct: 365 RYAREND 371


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KYVREND 8
+Y REND
Sbjct: 365 RYAREND 371


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KYVRENDGA 10
K VRE DGA
Sbjct: 48 KLVRERDGA 56


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 KYVREND 8
+Y REND
Sbjct: 369 RYAREND 375


>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KYVRENDGA 10
KY+ EN GA
Sbjct: 230 KYIVENTGA 238


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 2 KYVREND 8
+Y REND
Sbjct: 378 RYAREND 384


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KYVREND 8
+Y REND
Sbjct: 378 RYAREND 384


>sp|DMSD_HALSA|PUTATIVE dimethyl sulfoxide reductase chaperone|Halobacterium salinarum

Query: 3 YVRENDGA 10
Y+RE++GA
Sbjct: 136 YLREHEGA 143


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CKYVRENDG 9
C Y ENDG
Sbjct: 161 CLYRVENDG 169


>sp|SYD_PYRFU|ASPARTATE--TRNA(ASP) ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KYVRENDG 9
KY+ EN+G
Sbjct: 315 KYMSENEG 322


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 CKYVREND 8
KYVR ND
Sbjct: 1108 IKYVRAND 1115


>sp|RNH2_METM6|RIBONUCLEASE HII|Methanococcus maripaludis (strain C6 /

Query: 2 KYVRENDG 9
KYV EN G
Sbjct: 203 KYVHENKG 210


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 3 YVRENDG 9
Y+RE DG
Sbjct: 485 YIREPDG 491


>sp|TOP1_THEAC|DNA topoisomerase 1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CKYVREND 8
C Y REN+
Sbjct: 661 CSYNRENE 668


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 704 RYIAENEG 711


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 173 RYIAENEG 180


>sp|RFCS2_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 170 RYIAENEG 177


>sp|RFCS2_PYRAE|REPLICATION factor C small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 170 RYIAENEG 177


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 706 RYIAENEG 713


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 719 RYIAENEG 726


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 KYVRENDG 9
+Y+ EN+G
Sbjct: 1288 RYIAENEG 1295




50|SequenceR|255|246|YTCIICKYVR

>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 YTCIICKYV 9
YTC++CK++
Sbjct: 263 YTCVLCKFM 271


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TCIICK 7
TCIICK
Sbjct: 460 TCIICK 465


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 TCIICKY 8
TC++CK+
Sbjct: 262 TCVLCKF 268


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YTCIICKY 8
YTC C Y
Sbjct: 55 YTCTYCTY 62


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YTCIICKY 8
YTC C Y
Sbjct: 55 YTCTYCTY 62


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YTCIICKY 8
YTC C Y
Sbjct: 52 YTCTYCTY 59


>sp|SYP_SULAC|PROLINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 TCIICK 7
TC++CK
Sbjct: 465 TCVVCK 470


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YTCIICK 7
YTCI CK
Sbjct: 270 YTCIFCK 276


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TCIICK 7
TC++CK
Sbjct: 280 TCLLCK 285


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 TCIICK 7
TC++CK
Sbjct: 287 TCLLCK 292


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 6 CKYVR 10
CKYVR
Sbjct: 356 CKYVR 360


>sp|RNP4_SULAC|RIBONUCLEASE P protein component 4|Sulfolobus acidocaldarius (strain ATCC

Query: 2 TCIICKYVR 10
TC++C +VR
Sbjct: 84 TCLLCGWVR 92


>sp|THII_METS3|PROBABLE tRNA sulfurtransferase|Methanobrevibacter smithii (strain ATCC

Query: 2 TCIICK 7
TC++CK
Sbjct: 260 TCVLCK 265


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 CIICK 7
C+ICK
Sbjct: 464 CVICK 468


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 3 CIICKYVR 10
C+ C+Y R
Sbjct: 125 CVSCEYQR 132


>sp|RNP4_SACS2|RIBONUCLEASE P protein component 4|Saccharolobus solfataricus (strain ATCC

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YTCIICKY 8
Y C+ C +
Sbjct: 23 YNCVFCHF 30


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CIICK 7
C+ICK
Sbjct: 171 CVICK 175


>sp|RNP4_SACI3|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.27)

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90


>sp|RNP4_SACI7|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90


>sp|RNP4_SACI6|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.4 /

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90


>sp|RNP4_SACI4|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.14.25 /

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90


>sp|RNP4_SACI2|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90


>sp|RNP4_SACI1|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 TCIICKYVR 10
TC+IC + R
Sbjct: 82 TCLICNWQR 90




51|SequenceR|260|251|ESVTTYTCII

>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SVTTYTCI 9
SVT Y C+
Sbjct: 41 SVTAYLCV 48




52|SequenceR|265|256|KRWHYESVTT

>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RWHYESV 8
RWH ESV
Sbjct: 391 RWHAESV 397


>sp|TRPA_METKA|TRYPTOPHAN synthase alpha chain|Methanopyrus kandleri (strain AV19 /

Query: 1 KRWHYESV 8
+RWH E V
Sbjct: 215 ERWHVEEV 222


>sp|RS7_NANEQ|SMALL ribosomal subunit protein uS7|Nanoarchaeum equitans (strain

Query: 2 RWHYESVTT 10
RW YE VT
Sbjct: 8 RWDYEDVTV 16


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WHYESVTT 10
WH+E++ T
Sbjct: 983 WHHETIQT 990


>sp|SYW_THESM|TRYPTOPHAN--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KRWHYESV 8
KRW YE++
Sbjct: 129 KRWAYENI 136


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KRWHYESV 8
KRW YE++
Sbjct: 129 KRWAYENI 136


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KRWHYESVT 9
K WH SVT
Sbjct: 164 KNWHGTSVT 172


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 KRWHYESVT 9
K WH SVT
Sbjct: 96 KNWHSVSVT 104


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 KRWHYESVTT 10
++WH++ TT
Sbjct: 117 RKWHFKPNTT 126


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RWHY 5
RWHY
Sbjct: 209 RWHY 212


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KRWHYE 6
KRW YE
Sbjct: 395 KRWIYE 400


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RWHYESVT 9
+WHY +T
Sbjct: 9 QWHYSLLT 16


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RWHYES 7
RW YES
Sbjct: 303 RWDYES 308


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 KRWHYE 6
K+WH++
Sbjct: 118 KKWHFK 123


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 3 WHYESVTT 10
W Y +VTT
Sbjct: 402 WDYTNVTT 409




53|SequenceR|270|261|HNRLHKRWHY

>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 3 RLHKRW 8
R+H+RW
Sbjct: 195 RMHQRW 200


>sp|RL30_DESA1|LARGE ribosomal subunit protein uL30|Desulfurococcus amylolyticus

Query: 3 RLHKRWH 9
RLHK++H
Sbjct: 28 RLHKKYH 34


>sp|Y787_METJA|UNCHARACTERIZED protein MJ0787|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NRLHKR 7
NR+HKR
Sbjct: 168 NRIHKR 173


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain

Query: 3 RLHKRWH 9
RLHKR+H
Sbjct: 25 RLHKRYH 31


>sp|Y087_METJA|PUTATIVE ABC transporter permease protein|Methanocaldococcus jannaschii

Query: 4 LHKRWHY 10
++KRW Y
Sbjct: 226 MYKRWDY 232


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 5 HKRWH 9
H RWH
Sbjct: 373 HNRWH 377


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLHKRW 8
R+H++W
Sbjct: 298 RIHRKW 303


>sp|TRM14_ARCFU|TRNA (guanine(6)-N2)-methyltransferase|Archaeoglobus fulgidus (strain

Query: 4 LHKRW 8
+HKRW
Sbjct: 189 MHKRW 193




54|SequenceR|275|266|VKRPFHNRLH

>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKRPFHNRL 9
VKRP+ N+L
Sbjct: 194 VKRPYKNKL 202


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 VKRPFHNRL 9
VKRP+ N+L
Sbjct: 194 VKRPYKNKL 202


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RPFHNRLH 10
RP H +LH
Sbjct: 580 RPSHRKLH 587


>sp|HIS7_CENSY|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Cenarchaeum symbiosum (strain A)

Query: 1 VKRPFH 6
VKRP+H
Sbjct: 109 VKRPYH 114


>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 VKRPFHNR 8
V +PFH+R
Sbjct: 191 VYKPFHHR 198


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KRPFHN 7
KRPF+N
Sbjct: 299 KRPFNN 304




55|SequenceR|280|271|KGCTYVKRPF

>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 3 CTYVKRPF 10
C Y ++PF
Sbjct: 115 CDYCRKPF 122


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGCTYVKRPF 10
+GC+ KRP
Sbjct: 181 RGCSNFKRPL 190


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 KGCTYVKRPF 10
K C YV+ P
Sbjct: 354 KHCKYVRNPL 363


>sp|GLYA_CENSY|SERINE hydroxymethyltransferase|Cenarchaeum symbiosum (strain A)

Query: 2 GCTYV 6
GCTY+
Sbjct: 66 GCTYI 70


>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KGCTYVKRPF 10
K C Y++ P
Sbjct: 355 KHCRYIRNPL 364


>sp|Y481_METJA|UNCHARACTERIZED protein MJ0481|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CTYVKRPF 10
C Y K+PF
Sbjct: 61 CPYCKKPF 68


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GCTYV 6
GCTY+
Sbjct: 50 GCTYI 54


>sp|PRIL_PYRHO|DNA primase large subunit PriL|Pyrococcus horikoshii (strain ATCC

Query: 1 KGCTYVKRPF 10
K C Y++ P
Sbjct: 355 KHCKYIRNPL 364




56|SequenceR|285|276|SFYNCKGCTY

>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 FYNCKGC 8
FY CK C
Sbjct: 156 FYQCKNC 162


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SFYNCKGC 8
+FYNC C
Sbjct: 117 AFYNCPNC 124


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 FYNCKGCTY 10
FY C C Y
Sbjct: 620 FYRCTSCGY 628


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FYNCKGCTY 10
FY C C Y
Sbjct: 18 FYKCPYCNY 26


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YNCKGCTY 10
Y C CTY
Sbjct: 55 YTCTYCTY 62


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 YNCKGCTY 10
Y C CTY
Sbjct: 55 YTCTYCTY 62


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YNCKGCTY 10
Y C CTY
Sbjct: 52 YTCTYCTY 59


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 4 NCKGCTY 10
NCK C Y
Sbjct: 18 NCKKCGY 24


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FYNCKGCT 9
FY C+ C+
Sbjct: 118 FYMCRNCS 125


>sp|ATRMA_PYRAB|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus abyssi (strain GE5

Query: 1 SFYNCKGCT 9
+F C GCT
Sbjct: 63 AFGKCGGCT 71


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 2 FYNCKGC 8
FY CK C
Sbjct: 118 FYICKDC 124


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 5 CKGCT 9
C+GCT
Sbjct: 597 CRGCT 601


>sp|AMPA_CENSY|PROBABLE cytosol aminopeptidase|Cenarchaeum symbiosum (strain A)

Query: 2 FYNCKGCT 9
F C GCT
Sbjct: 273 FDKCGGCT 280


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 1 SFYNCKGCTY 10
+ + C+ C Y
Sbjct: 69 AVFKCRNCNY 78


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM 22066

Query: 3 YNCKGC 8
Y C GC
Sbjct: 293 YTCPGC 298


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 YNCKGC 8
Y C GC
Sbjct: 157 YRCTGC 162


>sp|Y3004_HALS3|UPF0179 protein OE_3004R|Halobacterium salinarum (strain ATCC 29341

Query: 4 NCKGCTY 10
+C+GC Y
Sbjct: 25 DCEGCPY 31


>sp|Y1401_HALSA|UPF0179 protein VNG_1401C|Halobacterium salinarum (strain ATCC 700922

Query: 4 NCKGCTY 10
+C+GC Y
Sbjct: 25 DCEGCPY 31


>sp|Y2319_HALLT|UPF0179 protein Hlac_2319|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 NCKGCTY 10
+C+GC Y
Sbjct: 26 DCEGCPY 32


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FYNCKGCTY 10
FY C C Y
Sbjct: 26 FYKCPFCDY 34


>sp|BRIX_METBU|PROBABLE Brix domain-containing ribosomal biogenesis|Methanococcoides

Query: 1 SFYNCKGCT 9
SF+NCK T
Sbjct: 22 SFFNCKYMT 30


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 2 FYNCKGCTY 10
+Y C C Y
Sbjct: 241 YYECSKCGY 249


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YNCKGCTY 10
+NC C Y
Sbjct: 24 FNCGACGY 31


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 2 FYNCKGCTY 10
+Y C C Y
Sbjct: 243 YYECPKCGY 251


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FYNCK 6
+YNCK
Sbjct: 79 YYNCK 83




57|SequenceR|290|281|NNKRDSFYNC

>sp|CDC6M_HALMA|ORC1-TYPE DNA replication protein 13|Haloarcula marismortui (strain ATCC

Query: 2 NKRDSFYN 9
N+RD+FY+
Sbjct: 242 NRRDAFYD 249


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 1 NNKRDSFY 8
N+KRD FY
Sbjct: 454 NDKRDFFY 461


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 4 RDSFYNC 10
RDSF NC
Sbjct: 222 RDSFGNC 228


>sp|LYSK_SACI7|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 NNKRDSFYN 9
NNKRD N
Sbjct: 233 NNKRDDLIN 241


>sp|LYSK_SACI6|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 NNKRDSFYN 9
NNKRD N
Sbjct: 233 NNKRDDLIN 241


>sp|LYSK_SACI4|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 NNKRDSFYN 9
NNKRD N
Sbjct: 233 NNKRDDLIN 241


>sp|LYSK_SACI3|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 NNKRDSFYN 9
NNKRD N
Sbjct: 233 NNKRDDLIN 241


>sp|LYSK_SACI2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 NNKRDSFYN 9
NNKRD N
Sbjct: 233 NNKRDDLIN 241


>sp|LYSK_SACI1|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 NNKRDSFYN 9
NNKRD N
Sbjct: 233 NNKRDDLIN 241


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain

Query: 1 NNKRDSFY 8
+NKR++FY
Sbjct: 30 DNKRENFY 37


>sp|Y2543_HALSA|PROTEIN VNG_2543C|Halobacterium salinarum (strain ATCC 700922

Query: 4 RDSFYN 9
RD+FYN
Sbjct: 41 RDAFYN 46


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 1 NNKRDSFY 8
N++RD FY
Sbjct: 454 NDRRDFFY 461


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 1 NNKRDSFYNC 10
N KR F NC
Sbjct: 21 NTKRKLFCNC 30


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 1 NNKRDSFYNC 10
N KR F NC
Sbjct: 21 NTKRKLFCNC 30


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 1 NNKRDSFYNC 10
N KR F NC
Sbjct: 21 NTKRKLFCNC 30


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 1 NNKRDSFYNC 10
N KR F NC
Sbjct: 21 NTKRKLFCNC 30


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae

Query: 3 KRDSFYN 9
KRD +YN
Sbjct: 5 KRDHYYN 11


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 NNKRDSFYNC 10
N KR F NC
Sbjct: 21 NTKRKLFCNC 30


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6 /

Query: 3 KRDSFYN 9
K+D FYN
Sbjct: 826 KKDRFYN 832


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5 /

Query: 3 KRDSFYN 9
K+D FYN
Sbjct: 826 KKDRFYN 832


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 1 NNKRDSFY 8
N KR+ FY
Sbjct: 30 NGKREGFY 37


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7 /

Query: 3 KRDSFYN 9
K+D FYN
Sbjct: 826 KKDRFYN 832


>sp|RIBL_THEKO|FAD synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 DSFYNC 10
D F+NC
Sbjct: 101 DQFFNC 106


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 KRDSFYN 9
K+D FYN
Sbjct: 826 KKDRFYN 832


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NNKRDSFYN 9
N RD+ YN
Sbjct: 450 NENRDNVYN 458


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NNKRDSFYN 9
N KR+ YN
Sbjct: 308 NEKREELYN 316


>sp|COFH_META3|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus aeolicus (strain ATCC

Query: 3 KRDSFYN 9
+RD+FYN
Sbjct: 353 ERDTFYN 359


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 1 NNKRDSFYNC 10
NN D + NC
Sbjct: 173 NNDYDIYINC 182




58|SequenceR|295|286|VHQVYNNKRD

>sp|Y104_SACS2|UNCHARACTERIZED aminotransferase SSO0104|Saccharolobus solfataricus (strain ATCC

Query: 1 VHQVYNNKRD 10
+ +VY KRD
Sbjct: 298 IRRVYKEKRD 307


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 VHQVYN 6
VHQ+YN
Sbjct: 108 VHQMYN 113




59|SequenceR|300|291|GTHTRVHQVY

>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GTHTRVHQV 9
GTH VHQV
Sbjct: 240 GTHDYVHQV 248


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTHTRVHQ 8
GTH VHQ
Sbjct: 248 GTHDYVHQ 255


>sp|SYS2_METVS|TYPE-2 serine--tRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GTHTRVHQ 8
GT+TR H+
Sbjct: 65 GTYTRAHE 72


>sp|SYS2_METMP|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GTHTRVHQ 8
GT+TR H+
Sbjct: 65 GTYTRAHE 72


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GTHTRVHQ 8
GT+TR H+
Sbjct: 65 GTYTRAHE 72


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GTHTRVHQ 8
GT+TR H+
Sbjct: 65 GTYTRAHE 72


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GTHTRVHQ 8
GT+TR H+
Sbjct: 65 GTYTRAHE 72


>sp|SYS2_METJA|TYPE-2 serine--tRNA ligase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GTHTRVHQ 8
GT+TR H+
Sbjct: 68 GTYTRAHE 75


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GTHTRVHQ 8
GTH VHQ
Sbjct: 248 GTHDYVHQ 255


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTHTRVHQ 8
GTH VHQ
Sbjct: 248 GTHDYVHQ 255


>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GTHTRVHQVY 10
GTH + +VY
Sbjct: 206 GTHREIDEVY 215


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 HTRVHQVY 10
TR+H+VY
Sbjct: 104 ETRLHEVY 111




60|SequenceR|305|296|KYPREGTHTR

>sp|RL2_PICTO|LARGE ribosomal subunit protein uL2|Picrophilus torridus (strain ATCC

Query: 1 KYPREGTH 8
KYPR+GT+
Sbjct: 29 KYPRDGTY 36


>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 1 KYPREG 6
KYPR+G
Sbjct: 136 KYPRKG 141


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 1 KYPREGTHT 9
+YP EGT T
Sbjct: 24 EYPTEGTPT 32


>sp|PA84_METTH|PROTEIN MTH_1184|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YPREGTHTR 10
Y REG TR
Sbjct: 14 YSREGAKTR 22


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 YPREGTHTR 10
YP THT+
Sbjct: 140 YPVTATHTK 148


>sp|HIS3_METHJ|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YPREGTHT 9
Y R+G HT
Sbjct: 2 YQRDGNHT 9


>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YPREGTHTR 10
YP THT+
Sbjct: 140 YPVTATHTK 148


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 1 KYPREGTHT 9
++P++G H+
Sbjct: 31 RFPKDGEHS 39




61|SequenceR|310|301|PCLECKYPRE

>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 1 PCLECKYPRE 10
PC+E K P E
Sbjct: 226 PCIEHKLPEE 235


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PCLEC 5
PC+EC
Sbjct: 235 PCMEC 239


>sp|RL6_METM7|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 3 LECKYPRE 10
+EC +PR+
Sbjct: 55 IECTFPRK 62


>sp|RL6_METM6|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 3 LECKYPRE 10
+EC +PR+
Sbjct: 55 IECTFPRK 62


>sp|RL6_METM5|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 3 LECKYPRE 10
+EC +PR+
Sbjct: 55 IECTFPRK 62


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PCLECKYPRE 10
PC E Y RE
Sbjct: 67 PCSELLYSRE 76


>sp|RL6_METMP|LARGE ribosomal subunit protein uL6|Methanococcus maripaludis (strain

Query: 3 LECKYPRE 10
+EC +PR+
Sbjct: 55 IECAFPRK 62


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PCLEC 5
PC+EC
Sbjct: 93 PCIEC 97


>sp|ALF1_AERPE|PROBABLE fructose-bisphosphate aldolase class 1|Aeropyrum pernix (strain

Query: 1 PCLECKYPR 9
P L+ YPR
Sbjct: 147 PALQLAYPR 155


>sp|TF2B_METST|TRANSCRIPTION initiation factor IIB|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CLECKYPR 9
C CK PR
Sbjct: 177 CRRCKVPR 184


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 3 LECKYPRE 10
EC+YP E
Sbjct: 21 FECEYPTE 28


>sp|IF2B_PICTO|TRANSLATION initiation factor 2 subunit|Picrophilus torridus (strain ATCC

Query: 2 CLECKYP 8
C ECK P
Sbjct: 103 CYECKSP 109


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 2 CLECKYPRE 10
C EC P E
Sbjct: 105 CAECDIPTE 113


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 2 CLECKYP 8
C ECK P
Sbjct: 102 CSECKLP 108


>sp|THS_METTL|CHAPERONIN subunit|Methanothermococcus thermolithotrophicus

Query: 4 ECKYPR 9
ECK+P+
Sbjct: 360 ECKHPK 365


>sp|THS_METMP|CHAPERONIN subunit|Methanococcus maripaludis (strain DSM 14266

Query: 4 ECKYPR 9
ECK+P+
Sbjct: 358 ECKHPK 363


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CLECKYPR 9
C CK PR
Sbjct: 200 CRRCKVPR 207


>sp|PUR1_ARCFU|AMIDOPHOSPHORIBOSYLTRANSFERASE fulgidus (strain ATCC 49558

Query: 2 CLECKYP 8
CL KYP
Sbjct: 441 CLTSKYP 447


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain ATCC

Query: 1 PCLECK 6
PC ECK
Sbjct: 185 PCRECK 190


>sp|RNP4_METVS|RIBONUCLEASE P protein component 4|Methanococcus vannielii (strain ATCC 35089

Query: 1 PCLECKY 7
CLECK+
Sbjct: 93 TCLECKH 99




62|SequenceR|315|306|QSSSYPCLEC

>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QSSSYPCLEC 10
+S PC+EC
Sbjct: 230 KSGIKPCMEC 239


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QSSSYPCLEC 10
+S PCL+C
Sbjct: 230 KSGVKPCLDC 239


>sp|FLPA_METTP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanothrix thermoacetophila

Query: 5 YPCLE 9
YPCLE
Sbjct: 52 YPCLE 56


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 PCLEC 10
PC+EC
Sbjct: 93 PCIEC 97


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 SSSYPCLEC 10
+S PC EC
Sbjct: 25 ASGLPCREC 33


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SSSYPCL 8
S+SYPC+
Sbjct: 124 SASYPCV 130


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain ATCC

Query: 3 SSYPCLEC 10
+ +PC EC
Sbjct: 182 TEWPCREC 189


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 SSSYPCLEC 10
++ Y C+EC
Sbjct: 425 AAQYICMEC 433


>sp|HIS6_METS3|IMIDAZOLE glycerol phosphate synthase subunit|Methanobrevibacter smithii

Query: 6 PCLEC 10
PCL+C
Sbjct: 8 PCLDC 12


>sp|HIS6_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 6 PCLEC 10
PCL+C
Sbjct: 8 PCLDC 12


>sp|HIS6_METST|IMIDAZOLE glycerol phosphate synthase subunit|Methanosphaera stadtmanae

Query: 6 PCLEC 10
PCL+C
Sbjct: 8 PCLDC 12


>sp|MCH_METHJ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SSSYPCLEC 10
S+ YP + C
Sbjct: 81 STDYPAISC 89




63|SequenceR|320|311|TLHTKQSSSY

>sp|NTPTH_THEPD|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermofilum pendens (strain DSM 2475

Query: 1 TLHTKQSSS 9
T+H ++SSS
Sbjct: 135 TIHERESSS 143


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 4 TKQSSSY 10
T+QSSSY
Sbjct: 100 TEQSSSY 106




64|SequenceR|325|316|TRMHRTLHTK

>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 MHRTLH 8
+HRTLH
Sbjct: 388 VHRTLH 393




65|SequenceR|330|321|KEGSHTRMHR

>sp|RL15E_METBU|LARGE ribosomal subunit protein eL15|Methanococcoides burtonii (strain

Query: 1 KEGSHTRMHR 10
KEGS TR+ R
Sbjct: 34 KEGSVTRVER 43


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 KEGSHTRMH 9
KEG H R++
Sbjct: 159 KEGKHPRVN 167




66|SequenceR|335|326|DCKFPKEGSH

>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 3 KFPKEGSH 10
+FPK+G H
Sbjct: 31 RFPKDGEH 38


>sp|RS24_METST|SMALL ribosomal subunit protein eS24|Methanosphaera stadtmanae (strain

Query: 1 DCKFPKEGS 9
+C++P EG+
Sbjct: 22 ECEYPTEGT 30


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 2 CKFPKEGS 9
C+F KEG+
Sbjct: 249 CRFAKEGA 256


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 2 CKFPKEGS 9
C PKEG+
Sbjct: 112 CSLPKEGA 119


>sp|GCSH_PICTO|PROBABLE glycine cleavage system H|Picrophilus torridus (strain ATCC

Query: 4 FPKEGSH 10
FPK G H
Sbjct: 44 FPKNGEH 50


>sp|TRUD_METTH|PROBABLE tRNA pseudouridine synthase D|Methanothermobacter

Query: 3 KFPKEGSH 10
K PK GSH
Sbjct: 361 KVPKLGSH 368


>sp|LYSY_SACS2|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 PKEGSH 10
P EGSH
Sbjct: 191 PSEGSH 196


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 PKEGSH 10
P EGSH
Sbjct: 188 PSEGSH 193




67|SequenceR|340|331|VYSCQDCKFP

>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 1 VYSCQDCKF 9
V+SCQDC +
Sbjct: 301 VWSCQDCTW 309


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VYSCQDCKFP 10
V+ C+ C FP
Sbjct: 57 VWECEGCGFP 66


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 1 VYSCQDC 7
VY C+DC
Sbjct: 244 VYHCEDC 250


>sp|KPTA_METAC|PROBABLE RNA 2'-phosphotransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 SCQDCKFP 10
SCQ CK P
Sbjct: 15 SCQQCKRP 22


>sp|KPTA_METMA|PROBABLE RNA 2'-phosphotransferase|Methanosarcina mazei (strain ATCC

Query: 3 SCQDCKFP 10
SCQ CK P
Sbjct: 15 SCQQCKRP 22


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YSCQDCKFP 10
YSC D K P
Sbjct: 239 YSCPDHKLP 247


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYSCQDC 7
VY+C DC
Sbjct: 256 VYACGDC 262


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 VYSCQDC 7
VY C DC
Sbjct: 663 VYGCPDC 669


>sp|TRM1_HALSA|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 VYSCQDC 7
VY CQ C
Sbjct: 235 VYHCQQC 241


>sp|TRM1_HALS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Halobacterium salinarum

Query: 1 VYSCQDC 7
VY CQ C
Sbjct: 235 VYHCQQC 241


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 1 VYSCQDCK 8
VY C DC+
Sbjct: 739 VYVCPDCE 746


>sp|Y2370_ARCFU|UPF0148 protein AF_2370|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YSCQDCKFP 10
+SC +CK P
Sbjct: 30 HSCPECKMP 38


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 4 CQDCKFP 10
C +CK P
Sbjct: 102 CSECKLP 108


>sp|ASPG_PYRFU|L-ASPARAGINASE furiosus (strain ATCC 43587

Query: 1 VYSCQDCKF 9
+ C+DC F
Sbjct: 36 IKDCEDCDF 44


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 1 VYSCQDC 7
V+ C+DC
Sbjct: 70 VFKCRDC 76


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 2 YSCQDC 7
Y C+DC
Sbjct: 700 YECRDC 705


>sp|FSX1_UNCAX|FUSEXIN 1|Uncultured archaeon

Query: 1 VYSCQD 6
+Y+CQD
Sbjct: 474 IYTCQD 479


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 4 CQDCKFP 10
CQD +FP
Sbjct: 87 CQDPRFP 93


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 YSCQDCKF 9
Y+C CKF
Sbjct: 263 YTCVLCKF 270


>sp|Y011_PYRAR|PROTEIN Pars_0011|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 CQDCKFP 10
CQD +FP
Sbjct: 87 CQDPRFP 93


>sp|RL37A_METMP|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 YSCQDCKFP 10
Y C C FP
Sbjct: 39 YKCPVCAFP 47


>sp|RL37A_METM5|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 YSCQDCKFP 10
Y C C FP
Sbjct: 39 YKCPVCAFP 47


>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 2 YSCQDC 7
Y C+DC
Sbjct: 409 YRCRDC 414


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VYSCQDCK--FP 10
+Y C CK FP
Sbjct: 156 IYRCTGCKKVFP 167


>sp|RL37A_METM7|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 YSCQDCKFP 10
Y C C FP
Sbjct: 39 YKCPVCAFP 47


>sp|RL37A_METM6|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 YSCQDCKFP 10
Y C C FP
Sbjct: 39 YKCPVCAFP 47


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 YSCQDCKFP 10
YSC + K P
Sbjct: 239 YSCSNHKLP 247


>sp|RL37A_METVS|LARGE ribosomal subunit protein eL43|Methanococcus vannielii (strain

Query: 2 YSCQDCKFP 10
Y C C FP
Sbjct: 39 YKCPVCAFP 47


>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 CQDCKFP 10
CQD +FP
Sbjct: 87 CQDPRFP 93


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 1 VYSCQDC 7
VY QDC
Sbjct: 12 VYDAQDC 18


>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC

Query: 4 CQDCKF 9
C+DC F
Sbjct: 73 CEDCGF 78


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YSCQDC 7
Y C+DC
Sbjct: 420 YVCKDC 425


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 2 YSCQDCKF 9
Y C DC+F
Sbjct: 99 YKCMDCQF 106


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YSCQDC 7
+ CQDC
Sbjct: 47 FICQDC 52


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 3 SCQDCKFP 10
SC D FP
Sbjct: 407 SCYDISFP 414


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 1 VYSCQDCKF 9
V+ C++C +
Sbjct: 70 VFKCRNCNY 78


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 2 YSCQDC 7
Y C+DC
Sbjct: 119 YICKDC 124


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 2 YSCQDC 7
Y C+DC
Sbjct: 48 YLCKDC 53


>sp|RL37A_METJA|LARGE ribosomal subunit protein eL43|Methanocaldococcus jannaschii

Query: 2 YSCQDCKFP 10
Y C C FP
Sbjct: 37 YKCPVCGFP 45


>sp|UDGA_SULTO|TYPE-4 uracil-DNA glycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VYSCQDCKF 9
V SC+ CK
Sbjct: 11 VISCKKCKL 19


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 VYSCQDCK 8
VY C D K
Sbjct: 696 VYGCDDAK 703


>sp|HYPA_METMP|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain DSM

Query: 4 CQDCKF 9
C DC+F
Sbjct: 78 CNDCEF 83


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YSCQDCK 8
+ C DCK
Sbjct: 328 FGCSDCK 334


>sp|HYPA_METM7|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C7 /

Query: 4 CQDCKF 9
C DC+F
Sbjct: 78 CMDCEF 83


>sp|HYPA_METM6|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C6 /

Query: 4 CQDCKF 9
C DC+F
Sbjct: 78 CMDCEF 83


>sp|HYPA_METM5|HYDROGENASE maturation factor HypA|Methanococcus maripaludis (strain C5 /

Query: 4 CQDCKF 9
C DC+F
Sbjct: 78 CMDCEF 83


>sp|Y1627_METJA|UPF0179 protein MJ1627|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VYSCQDCKF 9
+ C++CKF
Sbjct: 27 IEECKNCKF 35


>sp|RS21_HALVD|SMALL ribosomal subunit protein aS21|Haloferax volcanii (strain ATCC

Query: 1 VYSCQDCKF 9
+Y C DC F
Sbjct: 48 LYECPDCGF 56




68|SequenceR|345|336|HQNSAVYSCQ

>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 HQNSAVYSC 9
H NSAV +C
Sbjct: 223 HGNSAVIAC 231


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 1 HQNSAVYSCQ 10
HQ +A SC
Sbjct: 449 HQKAAAVSCH 458


>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 HQNSAVYSCQ 10
+ N ++Y CQ
Sbjct: 37 YMNYSIYDCQ 46


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NSAVYSCQ 10
NSA+YS Q
Sbjct: 725 NSALYSIQ 732




69|SequenceR|350|341|HRTVEHQNSA

>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HRTVEHQNSA 10
H TV H N A
Sbjct: 214 HNTVRHLNEA 223


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HRTVEHQNSA 10
H TV H N A
Sbjct: 214 HNTVRHLNEA 223


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 HRTVEHQNSA 10
H TV+HQ+ +
Sbjct: 68 HGTVDHQSRS 77


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HRTVEHQNSA 10
H T +H N A
Sbjct: 214 HNTTKHLNEA 223




70|SequenceR|355|346|HVQRAHRTVE

>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 HVQRAHRTVE 10
H+ R H T+E
Sbjct: 947 HITREHVTIE 956


>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 HVQRAHRTVE 10
HV A+RTVE
Sbjct: 143 HVHIANRTVE 152


>sp|RL1_METKA|LARGE ribosomal subunit protein uL1|Methanopyrus kandleri (strain AV19 /

Query: 2 VQRAHRT 8
++RAHRT
Sbjct: 145 IERAHRT 151




71|SequenceR|360|351|PKPGNHVQRA

>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 PGNHVQRA 10
PG+HVQ+
Sbjct: 108 PGSHVQQG 115


>sp|PYRDB_METAR|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanocella arvoryzae

Query: 1 PKPGNH 6
PKPG+H
Sbjct: 50 PKPGHH 55


>sp|CFBA_METMP|SIROHYDROCHLORIN cobaltochelatase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PGNHVQR 9
PGNH +R
Sbjct: 72 PGNHTER 78


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PKPGNH 6
PKPG H
Sbjct: 429 PKPGVH 434


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPGNHVQ 8
KPG+HV+
Sbjct: 189 KPGDHVR 195




72|SequenceR|365|356|HPCNLPKPGN

>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 CNLPKPG 9
CNLP PG
Sbjct: 172 CNLPHPG 178


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HPCNLPKPGN 10
HP NL PGN
Sbjct: 231 HPNNLGHPGN 240


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HPCNLP 6
HPCN+P
Sbjct: 374 HPCNMP 379


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 CNLPKPG 9
CN+P PG
Sbjct: 171 CNMPHPG 177


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 CNLPKPG 9
CN+P PG
Sbjct: 171 CNMPHPG 177


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 CNLPKPG 9
CN+P PG
Sbjct: 171 CNMPHPG 177


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PCNLPKPG 9
P LPKPG
Sbjct: 9 PLRLPKPG 16


>sp|Y1612_HALMA|UNCHARACTERIZED protein rrnAC1612|Haloarcula marismortui (strain ATCC 43049

Query: 1 HPCNLPKPGN 10
HP +LP P +
Sbjct: 128 HPISLPVPAD 137


>sp|AGLF_HALVD|UTP--GLUCOSE-1-PHOSPHATE uridylyltransferase AglF|Haloferax volcanii (strain ATCC 29605

Query: 1 HPCNLPKPGN 10
H C+L +P N
Sbjct: 180 HACHLVQPSN 189


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PCNLPKPGN 10
P LPKP +
Sbjct: 147 PAELPKPSD 155


>sp|BGAL_SACSH|BETA-GALACTOSIDASE shibatae (strain ATCC 51178

Query: 2 PCNLPKPGN 10
P LPKP N
Sbjct: 89 PNQLPKPQN 97


>sp|CRYD_NATPD|CRYPTOCHROME DASH|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HPCNLPKP 8
HP +LP P
Sbjct: 138 HPDDLPTP 145


>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 3 CNLPKPG 9
CN+ KPG
Sbjct: 136 CNVLKPG 142


>sp|Y280_METAC|UNCHARACTERIZED solute-binding protein MA_0280|Methanosarcina acetivorans (strain

Query: 4 NLPKPGN 10
N P+PGN
Sbjct: 28 NQPEPGN 34


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 CNLPKPG 9
CNL PG
Sbjct: 171 CNLSHPG 177


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NLPKPGN 10
N+PKP N
Sbjct: 212 NIPKPPN 218


>sp|HMD_METVO|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus voltae

Query: 1 HPCNLPKP 8
H C +P P
Sbjct: 174 HACTIPTP 181


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 3 CNLPKPG 9
C+LPK G
Sbjct: 112 CSLPKEG 118


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 HPCNLPKP 8
H C +P P
Sbjct: 174 HACTIPTP 181


>sp|TRPE2_HALSA|ANTHRANILATE synthase component 1 2|Halobacterium salinarum (strain ATCC 700922

Query: 3 CNLPKPG 9
C++P PG
Sbjct: 98 CDVPHPG 104


>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 1 HPCNLPKPGN 10
HP P P N
Sbjct: 150 HPAENPSPRN 159


>sp|HMD_METM7|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 HPCNLPKP 8
H C +P P
Sbjct: 174 HACTIPTP 181


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 HPCNLPKP 8
H C +P P
Sbjct: 174 HACTIPTP 181


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HPCNLPKP 8
H C +P P
Sbjct: 174 HACTIPTP 181


>sp|HMD_METTL|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermococcus thermolithotrophicus

Query: 1 HPCNLPKP 8
H C +P P
Sbjct: 174 HACTIPTP 181


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 2 PCNLPKPGN 10
PCN +P N
Sbjct: 115 PCNEKRPEN 123




73|SequenceR|370|361|TKYDCHPCNL

>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DCHPCNL 10
DC PC L
Sbjct: 215 DCQPCGL 221


>sp|GCST_HALSA|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 DCHPCNL 10
DC PC L
Sbjct: 220 DCQPCGL 226


>sp|GCST_HALS3|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 DCHPCNL 10
DC PC L
Sbjct: 220 DCQPCGL 226


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KYDCHPC 8
++ CHPC
Sbjct: 509 RWYCHPC 515


>sp|Y1199_ARCFU|UNCHARACTERIZED protein AF_1199|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YDCHPCNL 10
+ HPCN+
Sbjct: 371 FASHPCNM 378


>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 1 TKYDCHPC 8
+K D HPC
Sbjct: 244 SKIDDHPC 251


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 2 KYDCHPCNL 10
+Y C+ CN+
Sbjct: 722 RYVCYDCNI 730


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 4 DCHPCNL 10
+C PC L
Sbjct: 218 ECQPCGL 224


>sp|RPO5_NITMS|DNA-DIRECTED RNA polymerase subunit Rpo5|Nitrosopumilus maritimus (strain

Query: 2 KYDCHPCNL 10
KY+C P L
Sbjct: 33 KYNCKPTEL 41


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DCHPC 8
D HPC
Sbjct: 126 DAHPC 130


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KYDCHPC 8
KY+C C
Sbjct: 15 KYECRSC 21


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 KYDCHPCNL 10
++DC+ C L
Sbjct: 856 RFDCNDCPL 864


>sp|RNZ_METMP|RIBONUCLEASE Z|Methanococcus maripaludis (strain DSM 14266

Query: 1 TKYDCHP 7
TKY HP
Sbjct: 14 TKYRAHP 20


>sp|RNZ_METM7|RIBONUCLEASE Z|Methanococcus maripaludis (strain C7 /

Query: 1 TKYDCHP 7
TKY HP
Sbjct: 14 TKYRAHP 20


>sp|RNZ_METM6|RIBONUCLEASE Z|Methanococcus maripaludis (strain C6 /

Query: 1 TKYDCHP 7
TKY HP
Sbjct: 14 TKYRAHP 20


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 1 TKYDCHP 7
TKY HP
Sbjct: 14 TKYRAHP 20


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YDCH 6
YDCH
Sbjct: 201 YDCH 204


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YDCH 6
YDCH
Sbjct: 193 YDCH 196


>sp|IF2B_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 5 CHPCN 9
CH CN
Sbjct: 102 CHECN 106


>sp|RL24_METMP|LARGE ribosomal subunit protein uL24|Methanococcus maripaludis (strain

Query: 1 TKYDCHPCNL 10
T Y HP N+
Sbjct: 92 TAYPIHPSNV 101


>sp|RL24_METM7|LARGE ribosomal subunit protein uL24|Methanococcus maripaludis (strain C7

Query: 1 TKYDCHPCNL 10
T Y HP N+
Sbjct: 92 TAYPIHPSNV 101


>sp|RL24_METM5|LARGE ribosomal subunit protein uL24|Methanococcus maripaludis (strain C5

Query: 1 TKYDCHPCNL 10
T Y HP N+
Sbjct: 92 TAYPIHPSNV 101


>sp|RL24_METVS|LARGE ribosomal subunit protein uL24|Methanococcus vannielii (strain ATCC

Query: 1 TKYDCHPCNL 10
T Y HP N+
Sbjct: 92 TPYPIHPSNV 101


>sp|RL24_METVA|LARGE ribosomal subunit protein uL24|Methanococcus vannielii

Query: 1 TKYDCHPCNL 10
T Y HP N+
Sbjct: 92 TPYPIHPSNV 101


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YDCH 6
YDCH
Sbjct: 193 YDCH 196


>sp|IF2B_METST|TRANSLATION initiation factor 2 subunit|Methanosphaera stadtmanae (strain ATCC

Query: 5 CHPCN 9
CH CN
Sbjct: 109 CHECN 113


>sp|Y1008_CALMQ|UPF0179 protein Cmaq_1008|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 CHPC 8
CHPC
Sbjct: 103 CHPC 106




74|SequenceR|375|366|NSRDATKYDC

>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 3 RDATKY 8
RDATKY
Sbjct: 133 RDATKY 138


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NSRDATKY 8
N RDA KY
Sbjct: 260 NPRDAQKY 267


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 SRDATKYDC 10
S+D T+ DC
Sbjct: 32 SKDKTREDC 40


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 4 DATKYDC 10
DAT +DC
Sbjct: 166 DATGHDC 172


>sp|KDXD_HALVD|PROBABLE 2-keto-3-deoxyxylonate dehydratase|Haloferax volcanii (strain

Query: 2 SRDATKYD 9
SRD+T YD
Sbjct: 17 SRDSTTYD 24


>sp|CFBE_METJA|COENZYME F(430) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NSRDATKYD 9
N RD +YD
Sbjct: 212 NKRDINRYD 220


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 RDATKYD 9
R+ATKY+
Sbjct: 174 REATKYE 180




75|SequenceR|380|371|VHKKFNSRDA

>sp|Y572_METJA|UNCHARACTERIZED protein MJ0572|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHKKFNSRD 9
HKK+NS D
Sbjct: 76 THKKYNSDD 84


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HKKFNSRD 9
H FNS+D
Sbjct: 150 HHAFNSKD 157


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 HKKFNSRD 9
H FNS+D
Sbjct: 150 HHAFNSKD 157


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HKKFNSRD 9
H FNS+D
Sbjct: 150 HHAFNSKD 157


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 HKKFNSRD 9
H FNS+D
Sbjct: 150 HHAFNSKD 157


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KKFNSRD 9
KKFN RD
Sbjct: 8 KKFNGRD 14


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HKKFNSRD 9
H FNS+D
Sbjct: 150 HHAFNSKD 157


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 2 HKKFN 6
HKKFN
Sbjct: 402 HKKFN 406


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 2 HKKFNSRD 9
HK FNS D
Sbjct: 39 HKSFNSVD 46


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HKKFNSR 8
HKKF S+
Sbjct: 77 HKKFESK 83


>sp|TRM14_METJA|TRNA (guanine(6)-N2)-methyltransferase|Methanocaldococcus jannaschii

Query: 1 VHKKFNSRD 9
+H+KFN D
Sbjct: 293 LHEKFNESD 301


>sp|NADA_METJA|QUINOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VHKKFNSRD 9
VHKKF D
Sbjct: 175 VHKKFTIDD 183


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VHKKFNSRD 9
VHKKF D
Sbjct: 176 VHKKFTIED 184




76|SequenceR|385|376|NVHLEVHKKF

>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVHLEVHKKF 10
N HLEV KKF
Sbjct: 102 NYHLEVLKKF 111


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VHLEVHKK 9
+HL+VHKK
Sbjct: 276 IHLKVHKK 283


>sp|MUTS_HALWD|DNA mismatch repair protein MutS|Haloquadratum walsbyi (strain DSM

Query: 1 NVHLEVHKK 9
N+H +VH+K
Sbjct: 778 NLHFKVHRK 786


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 268 VHLNLHKTF 276


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 267 VHLNLHKTF 275


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 267 VHLNLHKTF 275


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 267 VHLNLHKTF 275


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 267 VHLNLHKTF 275


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 272 VHLNLHKTF 280


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 272 VHLNLHKTF 280


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 272 VHLNLHKTF 280


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 272 VHLNLHKTF 280


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 272 VHLNLHKTF 280


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 272 VHLNLHKTF 280


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 271 VHLNLHKTF 279


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 267 VHLNLHKTF 275


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 VHLEVHKKF 10
VH +HK F
Sbjct: 262 VHFNLHKSF 270


>sp|RS15_ARCFU|SMALL ribosomal subunit protein uS15|Archaeoglobus fulgidus (strain ATCC

Query: 3 HLEVHKK 9
HLEVH+K
Sbjct: 101 HLEVHRK 107


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 VHLEVHKKF 10
VH +HK F
Sbjct: 262 VHFNLHKSF 270


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 NVHLEVHKKF 10
++H+++HK F
Sbjct: 436 SLHIDLHKLF 445


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 2 VHLEVHKKF 10
VHL +HK F
Sbjct: 267 VHLNLHKTF 275


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 EVHKKF 10
E+HKKF
Sbjct: 100 EIHKKF 105


>sp|NADA_THEKO|QUINOLINATE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NVHLEVHKKF 10
N H VH+KF
Sbjct: 170 NGHCYVHRKF 179


>sp|FPRA_METJA|COENZYME F420H(2) oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EVHKKF 10
E+HKKF
Sbjct: 98 EIHKKF 103


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VHLEVHKK 9
+HL+ HKK
Sbjct: 196 IHLDNHKK 203


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HLEVHKK 9
+LE+HKK
Sbjct: 177 YLEIHKK 183


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 NVHLEVH 7
NV++EVH
Sbjct: 577 NVNMEVH 583


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 NVHLEVHKKF 10
N H VH+KF
Sbjct: 167 NGHCYVHQKF 176




77|SequenceR|390|381|NFQRPNVHLE

>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 NFQRPNVHL 9
N+QRP+V L
Sbjct: 9 NYQRPDVQL 17


>sp|Y570_METJA|UNCHARACTERIZED protein MJ0570|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQRPNVHL 9
F PNVHL
Sbjct: 43 FHIPNVHL 50


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 NFQRPNVH 8
N+QRP V
Sbjct: 26 NYQRPEVQ 33


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 2 FQRPNVHLE 10
FQ N+H E
Sbjct: 68 FQSDNIHAE 76


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 2 FQRPNVHLE 10
FQ N+H E
Sbjct: 68 FQSDNIHAE 76


>sp|RL13E_SACS2|LARGE ribosomal subunit protein eL13|Saccharolobus solfataricus (strain

Query: 3 QRPNVHLE 10
+RPN H E
Sbjct: 9 KRPNYHFE 16


>sp|RL13E_SACI7|LARGE ribosomal subunit protein eL13|Saccharolobus islandicus (strain

Query: 2 FQRPNVHLE 10
+RPN H E
Sbjct: 8 IKRPNYHFE 16


>sp|RL13E_SACI6|LARGE ribosomal subunit protein eL13|Saccharolobus islandicus (strain

Query: 2 FQRPNVHLE 10
+RPN H E
Sbjct: 8 IKRPNYHFE 16


>sp|RL13E_SACI4|LARGE ribosomal subunit protein eL13|Saccharolobus islandicus (strain

Query: 2 FQRPNVHLE 10
+RPN H E
Sbjct: 8 IKRPNYHFE 16


>sp|RL13E_SACI3|LARGE ribosomal subunit protein eL13|Saccharolobus islandicus (strain

Query: 2 FQRPNVHLE 10
+RPN H E
Sbjct: 8 IKRPNYHFE 16


>sp|RL13E_SACI1|LARGE ribosomal subunit protein eL13|Saccharolobus islandicus (strain

Query: 2 FQRPNVHLE 10
+RPN H E
Sbjct: 8 IKRPNYHFE 16


>sp|RL13E_SACI2|LARGE ribosomal subunit protein eL13|Saccharolobus islandicus (strain

Query: 2 FQRPNVHLE 10
+RPN H E
Sbjct: 8 IKRPNYHFE 16




78|SequenceR|395|386|DCVPCNFQRP

>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 1 DCVPCN 6
DC+PC+
Sbjct: 203 DCIPCD 208


>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 5 CNFQRP 10
C FQRP
Sbjct: 546 CTFQRP 551


>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 DCVPCNFQR 9
+CV C +QR
Sbjct: 124 ECVSCEYQR 132


>sp|RNP4_SACS2|RIBONUCLEASE P protein component 4|Saccharolobus solfataricus (strain ATCC

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DCVPCNFQR 9
DC CNF++
Sbjct: 30 DCGYCNFKK 38


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 2 CVPCNFQR 9
C CNF+R
Sbjct: 40 CEKCNFRR 47


>sp|RNP4_SACI7|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|RNP4_SACI2|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|RNP4_SACI1|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|RNP4_SACI6|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.4 /

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|RNP4_SACI4|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.14.25 /

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|RNP4_SACI3|RIBONUCLEASE P protein component 4|Saccharolobus islandicus (strain M.16.27)

Query: 2 CVPCNFQR 9
C+ CN+QR
Sbjct: 83 CLICNWQR 90


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 DCVPCNFQR 9
+C PC F+R
Sbjct: 26 ECEPCRFKR 34


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 DCVPCNFQR 9
+C PC F+R
Sbjct: 26 ECEPCRFKR 34


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 DCVPCNFQR 9
+C PC F+R
Sbjct: 26 ECEPCRFKR 34


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 1 DCVPCNFQR 9
+C PC F+R
Sbjct: 26 ECEPCRFKR 34


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 2 CVPCNFQR 9
CV C F+R
Sbjct: 179 CVACRFRR 186


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 1 DCVPCNF 7
DC+P N+
Sbjct: 425 DCLPLNY 431


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 3 VPCNFQRP 10
PCN +RP
Sbjct: 114 TPCNEKRP 121




79|SequenceR|400|391|KSAAYDCVPC

>sp|TRM56_PICTO|TRNA (cytidine(56)-2'-O)-methyltransferase|Picrophilus torridus (strain

Query: 6 DCVPC 10
DC+PC
Sbjct: 203 DCIPC 207


>sp|GCST_NATPD|PROBABLE aminomethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 AAYDCVPC 10
+A DC PC
Sbjct: 212 SALDCQPC 219


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain

Query: 1 KSAAYDCV 8
K AYDCV
Sbjct: 65 KYTAYDCV 72


>sp|GCST_HALSA|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 4 AYDCVPC 10
A DC PC
Sbjct: 218 ANDCQPC 224


>sp|GCST_HALS3|PROBABLE aminomethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 4 AYDCVPC 10
A DC PC
Sbjct: 218 ANDCQPC 224


>sp|Y1642_METJA|UNCHARACTERIZED protein MJ1642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YDCVPC 10
YDC+ C
Sbjct: 77 YDCISC 82


>sp|PAND_PYRIL|ASPARTATE 1-decarboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 AAYDCV 8
AAY+CV
Sbjct: 85 AAYECV 90




80|SequenceR|405|396|QLNCKKSAAY

>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 LNCKKSAAY 10
+NC K A+Y
Sbjct: 453 INCGKDASY 461


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 2 LNCKKSAAY 10
LN KK AY
Sbjct: 202 LNAKKETAY 210




81|SequenceR|410|401|SKFHYQLNCK

>sp|RS6E_NITMS|SMALL ribosomal subunit protein eS6|Nitrosopumilus maritimus (strain

Query: 5 YQLNCK 10
YQ+NCK
Sbjct: 104 YQINCK 109


>sp|PYRB_THEGJ|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus gammatolerans

Query: 2 KFHYQLNCK 10
K YQ+NCK
Sbjct: 245 KGSYQVNCK 253


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 4 HYQLNC 9
HY LNC
Sbjct: 18 HYTLNC 23


>sp|HIS3_META3|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FHYQLNCK 10
FHY+LN K
Sbjct: 108 FHYKLNLK 115


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 SKFHYQLN 8
SKF YQ N
Sbjct: 608 SKFSYQAN 615


>sp|DCDA_METJA|DIAMINOPIMELATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FHYQLNCK 10
+H+ +NCK
Sbjct: 340 YHHIINCK 347


>sp|RFRNP_METBU|RNA-FREE ribonuclease P|Methanococcoides burtonii (strain DSM 6242

Query: 1 SKFHYQLNC 9
S+ H Q++C
Sbjct: 40 SRLHLQISC 48


>sp|AMYA_PYRHO|ALPHA-AMYLASE horikoshii (strain ATCC 700860

Query: 1 SKFHYQLNCK 10
S +HYQ+ K
Sbjct: 495 SSYHYQIEDK 504




82|SequenceR|415|406|CTPHKSKFHY

>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 2 TPHKSKFHY 10
TPHK +F Y
Sbjct: 378 TPHKREFEY 386


>sp|HCY_NATPH|HALOCYANIN pharaonis (Natronobacterium pharaonis)

Query: 1 CTPHKSKFHY 10
CTPH+++ Y
Sbjct: 148 CTPHRAQGMY 157


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CTPHKSK 7
C PH+SK
Sbjct: 392 CKPHRSK 398


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CTPHKSKFHY 10
C HK +F Y
Sbjct: 152 CIGHKGRFEY 161


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 PHKSKFHY 10
PHK HY
Sbjct: 84 PHKVSLHY 91


>sp|ARLY_ARCFU|ARGININOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPHKSKFH 9
TPH +K H
Sbjct: 90 TPHGAKMH 97


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPHKSKFHY 10
T H+S F+Y
Sbjct: 942 TKHRSMFYY 950


>sp|SYK_SACS2|LYSINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 CTPHKSK 7
C PH++K
Sbjct: 385 CKPHRNK 391


>sp|NRPR_METMP|GLOBAL nitrogen regulator NrpR|Methanococcus maripaludis (strain DSM 14266

Query: 1 CTPHKSKF 8
C PH+S +
Sbjct: 274 CVPHESGY 281


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 3 PHKSKFHY 10
PHK F Y
Sbjct: 160 PHKRPFFY 167


>sp|RIFK_METM5|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C5 /

Query: 2 TPHKSKF 8
TP+K+KF
Sbjct: 21 TPYKNKF 27


>sp|RIMK_METBU|PROBABLE alpha-L-glutamate ligase|Methanococcoides burtonii (strain DSM

Query: 2 TPHKSKFHY 10
T HK HY
Sbjct: 42 TSHKPSIHY 50


>sp|RIFK_METM7|RIBOFLAVIN kinase|Methanococcus maripaludis (strain C7 /

Query: 2 TPHKSKF 8
TP+K+KF
Sbjct: 21 TPYKNKF 27




83|SequenceR|420|411|MTKNPCTPHK

>sp|FOLD_NATPD|BIFUNCTIONAL protein FolD|Natronomonas pharaonis (strain ATCC 35678

Query: 5 PCTPH 9
PCTPH
Sbjct: 138 PCTPH 142


>sp|FOLD1_HALMA|BIFUNCTIONAL protein FolD 1|Haloarcula marismortui (strain ATCC 43049

Query: 5 PCTPH 9
PCTPH
Sbjct: 138 PCTPH 142


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PCTPH 9
PCTPH
Sbjct: 145 PCTPH 149


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PCTPH 9
PCTPH
Sbjct: 148 PCTPH 152


>sp|FOLD_HALSA|BIFUNCTIONAL protein FolD|Halobacterium salinarum (strain ATCC 700922

Query: 5 PCTPH 9
PCTPH
Sbjct: 138 PCTPH 142


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 5 PCTPH 9
PCTPH
Sbjct: 138 PCTPH 142


>sp|FOLD_METBF|BIFUNCTIONAL protein FolD|Methanosarcina barkeri (strain Fusaro /

Query: 5 PCTPH 9
PCTPH
Sbjct: 145 PCTPH 149


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 1 MTKNPCTPHK 10
+T NP PHK
Sbjct: 44 VTLNPLEPHK 53


>sp|FOLD_HALWD|BIFUNCTIONAL protein FolD|Haloquadratum walsbyi (strain DSM 16790

Query: 5 PCTPH 9
PCTPH
Sbjct: 154 PCTPH 158


>sp|Y1308_METAC|UPF0173 metal-dependent hydrolase MA_1308|Methanosarcina acetivorans

Query: 3 KNPCTPHK 10
K PCTP +
Sbjct: 33 KAPCTPEE 40


>sp|PNCB_METMA|NICOTINATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TKNPCTP 8
TKNP TP
Sbjct: 142 TKNPGTP 148


>sp|HCY_NATPH|HALOCYANIN pharaonis (Natronobacterium pharaonis)

Query: 6 CTPHK 10
CTPH+
Sbjct: 148 CTPHR 152


>sp|Y2300_METMA|UPF0173 metal-dependent hydrolase MM_2300|Methanosarcina mazei (strain

Query: 3 KNPCTP 8
K+PC+P
Sbjct: 33 KSPCSP 38


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 5 PCTPH 9
PCTP+
Sbjct: 43 PCTPY 47


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 PCTPH 9
PCTP+
Sbjct: 45 PCTPY 49


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 3 KNPCTPH 9
KNP PH
Sbjct: 359 KNPFEPH 365


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 4 NPCTPHK 10
NP TP+K
Sbjct: 81 NPTTPNK 87


>sp|BIOB_METVS|BIOTIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 KNPCTPHK 10
KN CT H+
Sbjct: 175 KNICTTHE 182




84|SequenceR|425|416|VKSVDMTKNP

>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KSVDMTKNP 10
+SVD+TKNP
Sbjct: 181 RSVDVTKNP 189


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KSVDMTKNP 10
+SVD+TKNP
Sbjct: 181 RSVDVTKNP 189


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KSVDMTKNP 10
+SVD+TKNP
Sbjct: 181 RSVDVTKNP 189


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 2 KSVDMTKNP 10
+SVD+TKNP
Sbjct: 181 RSVDVTKNP 189


>sp|FLPA_METVS|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus vannielii (strain

Query: 2 KSVDMTKNP 10
+S+D+TKNP
Sbjct: 181 RSIDVTKNP 189


>sp|FLPA_STAMF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Staphylothermus marinus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 185 RSIDVTKEP 193


>sp|FLPA_SACI3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 SVDMTKNP 10
S+D+ KNP
Sbjct: 240 SIDVVKNP 247


>sp|FLPA_SACI7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_SACI6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_SACI4|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_SACI2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_SACI1|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 2 KSVDMTKNP 10
+SVD+T+NP
Sbjct: 179 RSVDVTENP 187


>sp|FLPA_SULAC|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_NANEQ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Nanoarchaeum equitans (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 182 RSIDVTKDP 190


>sp|FLPA_SACS2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus solfataricus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 184 RSIDVTKDP 192


>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 2 KSVDMTKNP 10
+S+D+TK+P
Sbjct: 181 RSIDVTKDP 189


>sp|FLPA_SULTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfurisphaera tokodaii (strain

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 184 RSIDVTKEP 192


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 2 KSVDMTKNP 10
+SVD+ +NP
Sbjct: 182 RSVDVLRNP 190


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain ATCC

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 181 RSIDVTKEP 189


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 181 RSIDVTKEP 189


>sp|FLPA_THEGJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus gammatolerans (strain

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 180 RSIDVTKEP 188


>sp|FLPA_THEON|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus onnurineus (strain

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 180 RSIDVTKEP 188


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 181 RSIDVTKEP 189


>sp|FLPA_THESM|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus sibiricus (strain DSM

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 180 RSIDVTKEP 188


>sp|FLPA_THEKO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Thermococcus kodakarensis (strain

Query: 2 KSVDMTKNP 10
+S+D+TK P
Sbjct: 180 RSIDVTKEP 188


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 4 VDMTKN 9
+DMTKN
Sbjct: 116 IDMTKN 121




85|SequenceR|430|421|TKKLKVKSVD

>sp|PAN_PYRAB|PROTEASOME-ACTIVATING nucleotidase|Pyrococcus abyssi (strain GE5 /

Query: 1 TKKLKVKSVD 10
T+++K+K+VD
Sbjct: 321 TRRMKLKNVD 330




86|SequenceR|435|426|AERKKTKKLK

***** No hits found ******


87|SequenceR|440|431|NDPLDAERKK

>sp|Y781_SACS2|UPF0148 protein SSO0781|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|Y1488_SACI1|UPF0148 protein YN1551_1488|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|Y1455_SACI2|UPF0148 protein LS215_1455|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|Y1409_SACI3|UPF0148 protein M1627_1409|Saccharolobus islandicus (strain M.16.27)

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|Y1359_SACI4|UPF0148 protein M1425_1359|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|Y1353_SACI7|UPF0148 protein YG5714_1353|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|Y1351_SACI6|UPF0148 protein M164_1351|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DPLDAER 8
DPLD+ER
Sbjct: 89 DPLDSER 95


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DPLDAERKK 10
DPLDA R++
Sbjct: 498 DPLDAYRER 506


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 2 DPLDAERKK 10
DPL AER +
Sbjct: 352 DPLSAERTR 360


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DPLDAERK 9
D LDAE+K
Sbjct: 549 DALDAEKK 556


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DPLDAERKK 10
DP DA++++
Sbjct: 258 DPFDAQKRR 266


>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NDPLDAERKK 10
N PL+A RK+
Sbjct: 274 NAPLEAYRKE 283


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DPLDAE 7
DP+DAE
Sbjct: 45 DPIDAE 50


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 1 NDPLDAERKK 10
N P++ ER+K
Sbjct: 205 NHPINEERRK 214


>sp|GYAR_KORCO|GLYOXYLATE reductase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 NDPLDAE 7
DP+DAE
Sbjct: 54 TDPIDAE 60




88|SequenceR|445|436|KENTINDPLD

>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 1 KENTINDPLD 10
KE+++ DP+D
Sbjct: 281 KEDSVPDPVD 290


>sp|Y1027_METJA|UNCHARACTERIZED protein MJ1027|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ENTINDPL 9
E T+NDP+
Sbjct: 190 ERTVNDPM 197


>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KENTINDPL 9
KEN +N PL
Sbjct: 72 KENEVNKPL 80


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ENTINDPLD 10
+NTIND LD
Sbjct: 297 KNTINDLLD 305


>sp|COBQ_METBF|PROBABLE cobyric acid synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ENTINDPLD 10
+NT+ND LD
Sbjct: 297 KNTVNDLLD 305


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 3 NTINDPL 9
NTI DPL
Sbjct: 192 NTITDPL 198


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ENTINDPLD 10
+NT+ND LD
Sbjct: 297 KNTVNDLLD 305


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ENTINDPLD 10
E IN+PLD
Sbjct: 156 EYEINEPLD 164


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 3 NTINDPL 9
NTI DPL
Sbjct: 192 NTITDPL 198


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 INDPLD 10
+NDPLD
Sbjct: 418 LNDPLD 423


>sp|SYK_METMJ|LYSINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 INDPLD 10
+NDPLD
Sbjct: 418 LNDPLD 423


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 3 NTINDPL 9
NT+ DPL
Sbjct: 192 NTVTDPL 198


>sp|THS3_HALVD|CHAPERONIN subunit CTT3|Haloferax volcanii (strain ATCC 29605

Query: 2 ENTINDPLD 10
ENT DP+D
Sbjct: 451 ENTGMDPID 459




89|SequenceR|450|441|QEIETKENTI

>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain

Query: 1 QEIETKENTI 10
QE+ TK+NT+
Sbjct: 69 QEVITKDNTV 78


>sp|COMB_THEVO|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma volcanium (strain

Query: 4 ETKENTI 10
ETKENT+
Sbjct: 174 ETKENTV 180




90|SequenceR|455|446|GKIKTQEIET

>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GKIKTQEIE 9
GKIK +E+E
Sbjct: 163 GKIKPREVE 171


>sp|AMPPA_PYRFU|AMP phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GKIKTQEIET 10
GKIK +IET
Sbjct: 3 GKIKILDIET 12




91|SequenceR|460|451|KGAVDGKIKT

>sp|DADD_METAC|5'-DEOXYADENOSINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KGAVDGKIKT 10
+GA DG+IKT
Sbjct: 170 QGAADGRIKT 179


>sp|DADD_METBF|5'-DEOXYADENOSINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 1 KGAVDGKIKT 10
+GA DG+IKT
Sbjct: 170 QGAADGRIKT 179


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 1 KGAVDGKI 8
+G+VDGKI
Sbjct: 591 RGSVDGKI 598


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 3 AVDGKIKT 10
+VDGK+KT
Sbjct: 254 SVDGKLKT 261


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GAVDGKIK 9
GAV+G++K
Sbjct: 97 GAVEGRVK 104


>sp|MOAA_METS5|PROBABLE GTP 3',8-cyclase|Metallosphaera sedula (strain ATCC 51363

Query: 4 VDGKIKT 10
VDGK+KT
Sbjct: 256 VDGKLKT 262


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 VDGKIKT 10
VDGK+KT
Sbjct: 254 VDGKLKT 260


>sp|RL30_THEVO|LARGE ribosomal subunit protein uL30|Thermoplasma volcanium (strain ATCC

Query: 1 KGAVDGKIK 9
K VDGKIK
Sbjct: 97 KALVDGKIK 105


>sp|PRIS_STAMF|DNA primase small subunit PriS|Staphylothermus marinus (strain ATCC

Query: 5 DGKIKT 10
DGKIKT
Sbjct: 123 DGKIKT 128


>sp|DADD_METMA|5'-DEOXYADENOSINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KGAVDGKIKT 10
+GA G+IKT
Sbjct: 170 QGAAKGRIKT 179


>sp|RL18_METB6|LARGE ribosomal subunit protein uL18|Methanoregula boonei (strain DSM

Query: 1 KGAVDGKIK 9
KGAVDG ++
Sbjct: 121 KGAVDGGLE 129


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KGAVDG 6
KGA+DG
Sbjct: 139 KGAIDG 144




92|SequenceR|465|456|SKENKKGAVD

>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 2 KENKKGAV 9
KENKKG V
Sbjct: 257 KENKKGTV 264


>sp|PFDB_THEVO|PREFOLDIN subunit beta|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SKENKKGAV 9
+++NKKGAV
Sbjct: 115 NQDNKKGAV 123


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 2 KENKKGAV 9
KEN KG V
Sbjct: 257 KENSKGTV 264




93|SequenceR|470|461|KEAKVSKENK

>sp|DGGGP_METVS|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KEAKVSKENK 10
K AK+ K+NK
Sbjct: 119 KYAKIYKKNK 128




94|SequenceR|475|466|KSVDRKEAKV

>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KSVDRKEAK 9
K +DR EAK
Sbjct: 526 KGIDRDEAK 534


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 3 VDRKEAKV 10
+DRKEA V
Sbjct: 145 IDRKEATV 152


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 VDRKEAKV 10
+DRKEA V
Sbjct: 149 IDRKEATV 156


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 3 VDRKEAKV 10
+DRKEA V
Sbjct: 149 IDRKEATV 156


>sp|EF2_THEVO|ELONGATION factor 2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KSVDRKEAK 9
K +DR+EA+
Sbjct: 526 KGIDREEAR 534


>sp|RF1_METS3|PEPTIDE chain release factor subunit|Methanobrevibacter smithii (strain

Query: 3 VDRKEAKV 10
+DRKEA +
Sbjct: 147 IDRKEATI 154


>sp|ILVE_METJA|PUTATIVE branched-chain-amino-acid aminotransferase|Methanocaldococcus

Query: 1 KSVDRKEAKV 10
K VD K+AKV
Sbjct: 8 KFVDEKDAKV 17




95|SequenceR|480|471|SPKKEKSVDR

>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SPKKEKSVDR 10
SP+KEK DR
Sbjct: 619 SPEKEKLFDR 628


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKKEKSV 8
PKKEK++
Sbjct: 401 PKKEKTI 407


>sp|LONB_THEVO|ARCHAEAL Lon protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SPKKEKSVDR 10
SP+K+K DR
Sbjct: 619 SPEKDKLFDR 628


>sp|Y1268_SULTO|PUTATIVE HTH-type transcriptional regulatory protein|Sulfurisphaera

Query: 3 KKEKSVD 9
KKEKS+D
Sbjct: 26 KKEKSID 32




96|SequenceR|485|476|VSVNNSPKKE

>sp|LONB_THEAC|ARCHAEAL Lon protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VSVNNSPKKE 10
V++ NSP+KE
Sbjct: 614 VALVNSPEKE 623




97|SequenceR|490|481|TTVQIVSVNN

***** No hits found ******


98|SequenceR|495|486|SKRTRTTVQI

>sp|GCH3_NATPD|GTP cyclohydrolase III|Natronomonas pharaonis (strain ATCC 35678

Query: 1 SKRTRTTVQI 10
S+RT T VQI
Sbjct: 130 SERTDTDVQI 139




99|SequenceR|500|491|KVETVSKRTR

***** No hits found ******


100|SequenceR|505|496|HVDMEKVETV

>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VDMEKVETV 10
+DMEKVE +
Sbjct: 248 IDMEKVEAI 256


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 HVDMEKVET 9
H D+E+VET
Sbjct: 231 HRDLERVET 239


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 HVDMEKVET 9
H DME+++T
Sbjct: 228 HRDMERIKT 236


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 HVDMEKVET 9
H D+E+VET
Sbjct: 224 HRDLERVET 232


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HVDMEKVE 8
HVD+EK++
Sbjct: 162 HVDIEKIK 169


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 1 HVDMEKV 7
HVD+EK+
Sbjct: 223 HVDLEKI 229


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VDMEKVET 9
+DMEK++T
Sbjct: 40 IDMEKLKT 47


>sp|Y1674_METAR|UPF0280 protein UNCMA_16740|Methanocella arvoryzae (strain DSM 22066

Query: 1 HVDMEKV 7
HVD EK+
Sbjct: 235 HVDYEKI 241




101|SequenceR|510|501|SNSGTHVDME

>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NSGTHVDM 9
+SGT++DM
Sbjct: 380 SSGTNIDM 387


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 NSGTHVDME 10
N+G H D+E
Sbjct: 677 NAGRHTDIE 685


>sp|QUEC_METPE|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 GTHVDM 9
GTH+D+
Sbjct: 153 GTHIDL 158


>sp|SYK_PICTO|LYSINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SNSGTHVDME 10
+N G H+D +
Sbjct: 297 NNPGRHIDFD 306




102|SequenceR|515|506|KSFKESNSGT

>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 KSFKESNSGT 10
K+F+ESN T
Sbjct: 12 KAFQESNEKT 21


>sp|CG121_PYRAB|KEOPS complex subunit Cgi121|Pyrococcus abyssi (strain GE5 /

Query: 1 KSFKESNSG 9
K+FK NSG
Sbjct: 6 KNFKHDNSG 14


>sp|SYC_THEAC|CYSTEINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FKESNSG 9
FKE NSG
Sbjct: 14 FKEMNSG 20


>sp|YF1B_METJA|UNCHARACTERIZED protein MJ1516.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSFKESNS 8
+SFK+SNS
Sbjct: 68 QSFKKSNS 75




103|SequenceR|520|511|KSKKTKSFKE

***** No hits found ******


104|SequenceR|525|516|VELKRKSKKT

>sp|HIS7_METHJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ELKRKSKKT 10
E+KRK+K+T
Sbjct: 5 EIKRKTKET 13


>sp|HIS7_METST|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VELKRKSKKT 10
VEL RK+++T
Sbjct: 6 VELTRKTRET 15


>sp|CBSA_SACS2|CYTOCHROME b558/566 subunit A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VELKRKSKKT 10
+ +KRKSK T
Sbjct: 9 MSIKRKSKYT 18


>sp|MPTA_METMA|GTP cyclohydrolase MptA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VELKRKSKK 9
VE+KRK K+
Sbjct: 34 VEIKRKDKR 42


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 1 VELKRKSKK 9
VE+KRK K+
Sbjct: 34 VEIKRKDKR 42




105|SequenceR|530|521|LSHSDVELKR

>sp|SUI1_SULTO|PROTEIN translation factor SUI1 homolog|Sulfurisphaera tokodaii (strain

Query: 1 LSHSDVELKR 10
LS SDVELK+
Sbjct: 43 LSGSDVELKK 52


>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 1 LSHSDVELKR 10
L+HSDV+ R
Sbjct: 90 LTHSDVQCDR 99


>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LSHSDVEL 8
L H DVEL
Sbjct: 152 LKHRDVEL 159


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LSHSDVEL 8
L H DVEL
Sbjct: 152 LKHRDVEL 159


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 1 LSHSDVEL 8
L H DVEL
Sbjct: 149 LKHHDVEL 156


>sp|PYRG_CALMQ|CTP synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LSHSDVELKR 10
L HS +EL+R
Sbjct: 190 LQHSVMELRR 199


>sp|Y1037_META3|UPF0179 protein Maeo_1037|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LSHSDVE 7
LSHSD++
Sbjct: 92 LSHSDIQ 98


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 LSHSDVELKR 10
L+HSDV R
Sbjct: 90 LTHSDVHCDR 99


>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LSHSDVELK 9
S+SD+EL+
Sbjct: 109 FSYSDIELR 117


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 SHSDVELK 9
+H DVE+K
Sbjct: 23 NHKDVEVK 30




106|SequenceR|535|526|NVPGHLSHSD

>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 NVPGHLSH 8
N PGH H
Sbjct: 67 NCPGHFGH 74


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 1 NVPGHLSH 8
N PGH H
Sbjct: 67 NCPGHFGH 74


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NVPGHLSHS 9
N P HL HS
Sbjct: 50 NSPMHLGHS 58


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VPGHLSH 8
V GHLSH
Sbjct: 65 VEGHLSH 71


>sp|KAD6_THEGJ|PUTATIVE adenylate kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 VPGHLSH 8
V GHLSH
Sbjct: 70 VDGHLSH 76


>sp|GLYA_PYRCJ|SERINE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 GHLSHSD 10
GH+SHS+
Sbjct: 120 GHISHSN 126


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NVPGH 5
NVPGH
Sbjct: 284 NVPGH 288


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 VPGHLSH 8
V GHLSH
Sbjct: 69 VEGHLSH 75


>sp|HTPX_SACI1|PROTEASE HtpX homolog|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 150 GHLKHRD 156


>sp|HTPX2_SULTO|PROTEASE HtpX homolog 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 149 GHLRHKD 155


>sp|HTPX2_SACS2|PROTEASE HtpX homolog 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 150 GHLKHRD 156


>sp|HTPX_THEVO|PROTEASE HtpX homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 152 GHLKHHD 158


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 2 VPGHLSHSD 10
VPG SH D
Sbjct: 140 VPGWKSHED 148


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NVPGHLSHS 9
N+P SHS
Sbjct: 823 NIPSPFSHS 831


>sp|RTCA_ARCFU|RNA 3'-terminal phosphate cyclase|Archaeoglobus fulgidus (strain ATCC

Query: 1 NVPGHLS 7
N+PGH++
Sbjct: 193 NLPGHVA 199


>sp|HTPX_THEAC|PROTEASE HtpX homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 149 GHLRHRD 155


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 147 GHLKHHD 153


>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 138 GHLRHRD 144


>sp|VHTG_METMA|F420 non-reducing hydrogenase II small|Methanosarcina mazei (strain ATCC

Query: 1 NVPGHLSHSD 10
N+PG +H D
Sbjct: 223 NIPGCPAHPD 232


>sp|HTPX_AERPE|PROTEASE HtpX homolog|Aeropyrum pernix (strain ATCC 700893

Query: 4 GHLSHSD 10
GHL H D
Sbjct: 137 GHLKHRD 143


>sp|GLYA_METKA|SERINE hydroxymethyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 4 GHLSHSD 10
GH+SH D
Sbjct: 120 GHISHHD 126


>sp|KAD6_THEON|PUTATIVE adenylate kinase|Thermococcus onnurineus (strain NA1)

Query: 4 GHLSH 8
GHLSH
Sbjct: 72 GHLSH 76


>sp|KAD6_THEKO|PUTATIVE adenylate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GHLSH 8
GHLSH
Sbjct: 72 GHLSH 76


>sp|KAD6_PYRHO|PUTATIVE adenylate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GHLSH 8
GHLSH
Sbjct: 72 GHLSH 76


>sp|KAD6_PYRFU|PUTATIVE adenylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GHLSH 8
GHLSH
Sbjct: 72 GHLSH 76


>sp|KAD6_PYRAB|PUTATIVE adenylate kinase|Pyrococcus abyssi (strain GE5 /

Query: 4 GHLSH 8
GHLSH
Sbjct: 72 GHLSH 76


>sp|HTPX1_SULTO|PROTEASE HtpX homolog 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 GHLSHSD 10
GH+ H+D
Sbjct: 140 GHIKHND 146


>sp|IF2P_ARCFU|PROBABLE translation initiation factor IF-2|Archaeoglobus fulgidus (strain

Query: 2 VPGHLSHSD 10
+PG SH D
Sbjct: 140 IPGWQSHED 148


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 4 GHLSH 8
GHLSH
Sbjct: 121 GHLSH 125


>sp|RS4_METST|SMALL ribosomal subunit protein uS4|Methanosphaera stadtmanae (strain

Query: 1 NVPGHL 6
N PGHL
Sbjct: 138 NAPGHL 143


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 4 GHLSH 8
GHLSH
Sbjct: 121 GHLSH 125


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GHLSH 8
GHLSH
Sbjct: 121 GHLSH 125


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 4 GHLSH 8
GHLSH
Sbjct: 121 GHLSH 125


>sp|GLYA_METPE|SERINE hydroxymethyltransferase|Methanosphaerula palustris (strain ATCC

Query: 4 GHLSH 8
GHLSH
Sbjct: 122 GHLSH 126


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 4 GHLSH 8
GHLSH
Sbjct: 121 GHLSH 125




107|SequenceR|540|531|SSEEDNVPGH

>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 SEEDNVP 8
SEEDNVP
Sbjct: 119 SEEDNVP 125


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 SEEDNVP 8
S+EDNVP
Sbjct: 119 SDEDNVP 125


>sp|RS3A_METLZ|SMALL ribosomal subunit protein eS1|Methanocorpusculum labreanum

Query: 1 SSEEDNVPG 9
SS +NVPG
Sbjct: 39 SSNPENVPG 47


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 SEEDNVP 8
S+E+NVP
Sbjct: 118 SDEENVP 124


>sp|RS15_METBU|SMALL ribosomal subunit protein uS15|Methanococcoides burtonii (strain

Query: 1 SSEEDNVP 8
+SEE NVP
Sbjct: 78 NSEEPNVP 85




108|SequenceR|545|536|KKKKTSSEED

>sp|Y793_METJA|UNCHARACTERIZED protein MJ0793|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKKKTSSEED 10
KK+K +EED
Sbjct: 134 KKEKPLTEED 143




109|SequenceR|550|541|KSEVKKKKKT

***** No hits found ******


110|SequenceR|555|546|SNNKSKSEVK

>sp|RFCL_METBF|REPLICATION factor C large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SNNKSKSEVK 10
S+N KSEVK
Sbjct: 614 SDNSEKSEVK 623




111|SequenceR|560|551|KPVEQSNNKS

***** No hits found ******


112|SequenceR|565|556|VKSDGKPVEQ

>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DGKPVE 9
DGKPVE
Sbjct: 181 DGKPVE 186


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VKSDGKPVE 9
V DGKP+E
Sbjct: 828 VNVDGKPIE 836


>sp|KDPC_THEAC|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KSDGKPVE 9
+S+G+PVE
Sbjct: 37 QSEGQPVE 44


>sp|SAHH_ARCFU|ADENOSYLHOMOCYSTEINASE fulgidus (strain ATCC 49558

Query: 1 VKSDGKPVE 9
V +DG PVE
Sbjct: 329 VAADGHPVE 337


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KSDGKPV 8
K DGKPV
Sbjct: 89 KKDGKPV 95


>sp|MDH_SACS2|MALATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKSDGKPVEQ 10
VK +GKP E+
Sbjct: 183 VKVNGKPFEE 192


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 VKSDGKP 7
VKSDG P
Sbjct: 282 VKSDGTP 288


>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KSDGKPV 8
K DGKPV
Sbjct: 197 KKDGKPV 203


>sp|G3PP_PYRAB|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 SDGKPVEQ 10
+DG PV+Q
Sbjct: 117 TDGNPVKQ 124


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 1 VKSDGKPV 8
+K+D KPV
Sbjct: 276 IKTDAKPV 283


>sp|RS3_METAR|SMALL ribosomal subunit protein uS3|Methanocella arvoryzae (strain DSM

Query: 1 VKSDGKPVEQ 10
+K GKPVE+
Sbjct: 151 IKHCGKPVEE 160


>sp|G3PP_PYRHO|GLYCERALDEHYDE 3-phosphate phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 SDGKPVEQ 10
+DG PV+Q
Sbjct: 117 TDGNPVKQ 124


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 4 DGKPVEQ 10
DG+P EQ
Sbjct: 215 DGEPTEQ 221


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VKSDGKPV 8
VKSD +PV
Sbjct: 198 VKSDWRPV 205


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 DGKPVEQ 10
DGKPV++
Sbjct: 416 DGKPVQE 422


>sp|ASSY_PICTO|ARGININOSUCCINATE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VKSDGK 6
VKSDGK
Sbjct: 162 VKSDGK 167


>sp|RS3_METAC|SMALL ribosomal subunit protein uS3|Methanosarcina acetivorans (strain

Query: 1 VKSDGKPVEQ 10
+K G PVE+
Sbjct: 151 IKHSGNPVEE 160


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 4 DGKPVEQ 10
DG+P EQ
Sbjct: 218 DGEPTEQ 224


>sp|ADEC_METBU|ADENINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VKSDGKPVEQ 10
V S+GK VEQ
Sbjct: 498 VVSNGKVVEQ 507


>sp|SYFB_SULTO|PHENYLALANINE--TRNA ligase beta subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VKSDGKPVEQ 10
+KS+ KP++Q
Sbjct: 29 LKSEMKPIDQ 38


>sp|RS3_METTP|SMALL ribosomal subunit protein uS3|Methanothrix thermoacetophila (strain

Query: 1 VKSDGKPVEQ 10
+K GKP E+
Sbjct: 151 IKHSGKPAEE 160


>sp|Y114_METJA|UNCHARACTERIZED protein MJ0114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKSDGKPV 8
V DGKPV
Sbjct: 245 VAKDGKPV 252


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 4 DGKPVEQ 10
DG+P EQ
Sbjct: 218 DGEPTEQ 224


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VKSDGK 6
VKSDGK
Sbjct: 45 VKSDGK 50




113|SequenceR|570|561|KKNEEVKSDG

>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KNEEVKSD 9
KNE++KSD
Sbjct: 276 KNEKIKSD 283


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 1 KKNEEVKSD 9
K+NE VK+D
Sbjct: 152 KQNERVKTD 160


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKNEEVK 7
KKNEEVK
Sbjct: 20 KKNEEVK 26




114|SequenceR|575|566|MCTNQKKNEE

>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CTNQKKNE 9
C N+KK E
Sbjct: 360 CANEKKAE 367


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 2 CTNQKKNE 9
C N+KK E
Sbjct: 360 CANEKKAE 367


>sp|THI4_META3|THIAMINE thiazole synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CTNQKKNEE 10
CT +KNE+
Sbjct: 183 CTLARKNED 191




115|SequenceR|580|571|KTSKKMCTNQ

***** No hits found ******


116|SequenceR|585|576|KLTKKKTSKK

>sp|Y871_METJA|UNCHARACTERIZED protein MJ0871|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLTKKKTSKK 10
KL KK+ +KK
Sbjct: 166 KLNKKENAKK 175




117|SequenceR|590|581|KSSKNKLTKK

***** No hits found ******


118|SequenceR|595|586|PKSSKKSSKN

***** No hits found ******


119|SequenceR|600|591|PEKQPPKSSK

>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 1 PEKQPPKSSK 10
P++QPP + +
Sbjct: 2 PQRQPPGTEE 11




120|SequenceR|605|596|SGKEVPEKQP

>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GKEVPEKQ 9
G++VPE+Q
Sbjct: 7 GRKVPEEQ 14


>sp|TYSY_METJA|PUTATIVE thymidylate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KEVPEKQP 10
K+VPEK P
Sbjct: 51 KKVPEKYP 58


>sp|SYK_NATPD|LYSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EVPEKQP 10
E+PE+QP
Sbjct: 386 ELPERQP 392


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 3 KEVPEKQ 9
KE+PE+Q
Sbjct: 499 KEIPEEQ 505


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 3 KEVPEKQP 10
KE+ E+QP
Sbjct: 185 KEISERQP 192


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 KEVPEKQP 10
KE+PE +P
Sbjct: 524 KEIPEPEP 531


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 3 KEVPEK 8
KE+PEK
Sbjct: 197 KEIPEK 202


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 2 GKEVPEKQP 10
G VPE QP
Sbjct: 117 GMMVPEDQP 125


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GKEVPEKQP 10
G VPE QP
Sbjct: 117 GMMVPEDQP 125


>sp|BIOB_METVS|BIOTIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SGKEVPEKQ 9
SGK++ EK+
Sbjct: 114 SGKKISEKE 122


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GKEVPEKQP 10
G+E PEK P
Sbjct: 896 GEEFPEKVP 904




121|SequenceR|610|601|PDMQASGKEV

>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PDMQASGKEV 10
P+M++ GKEV
Sbjct: 876 PEMRSHGKEV 885


>sp|KPRS_SULAC|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PDMQASGKEV 10
PD++ GKEV
Sbjct: 203 PDLRLDGKEV 212


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 PDMQASGKE 9
PD+ A+GK+
Sbjct: 453 PDLNATGKK 461


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PDMQASGKEV 10
P+M+ GKEV
Sbjct: 894 PEMRKHGKEV 903


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 PDMQASGKEV 10
P+M+ GKE+
Sbjct: 894 PEMRKHGKEI 903


>sp|RS6E_THEVO|SMALL ribosomal subunit protein eS6|Thermoplasma volcanium (strain ATCC

Query: 1 PDMQASGKE 9
PD+Q GK+
Sbjct: 65 PDLQTQGKK 73


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 PDMQASGKEV 10
P+++A+ KEV
Sbjct: 38 PELKANAKEV 47


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PDMQASGKEV 10
PD++ GKE+
Sbjct: 875 PDLKRFGKEI 884


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 PDMQASGKEV 10
PD+QAS +V
Sbjct: 7 PDVQASNPDV 16


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DMQASGKEV 10
D+Q GKEV
Sbjct: 268 DVQIEGKEV 276


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DMQASGKEV 10
+++ASGK+V
Sbjct: 65 ELKASGKDV 73


>sp|MPTA_NATPD|GTP cyclohydrolase MptA|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PDMQASGKEV 10
PD+QAS +V
Sbjct: 6 PDVQASSPDV 15


>sp|MPTA_HALMA|GTP cyclohydrolase MptA|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDMQASGKEV 10
PD+QAS +V
Sbjct: 6 PDVQASSPDV 15


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 DMQASGKEV 10
DMQ +G+E+
Sbjct: 655 DMQQNGEEI 663




122|SequenceR|615|606|PGMQPPDMQA

>sp|HELS_THEAC|ATP-DEPENDENT DNA helicase Hel308|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GMQPPDMQA 10
G+ P DMQA
Sbjct: 561 GIAPGDMQA 569


>sp|RS4E_THEAC|SMALL ribosomal subunit protein eS4|Thermoplasma acidophilum (strain

Query: 1 PGMQPPD 7
PGM P D
Sbjct: 29 PGMHPKD 35


>sp|RS17_AERPE|SMALL ribosomal subunit protein uS17|Aeropyrum pernix (strain ATCC

Query: 1 PGMQPPD 7
PG++PP+
Sbjct: 13 PGVEPPE 19


>sp|Y803_METMA|DNA-BINDING protein MM_0803|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 QPPDMQA 10
QP DMQA
Sbjct: 28 QPSDMQA 34




123|SequenceR|620|611|AETPAPGMQP

>sp|NTPPA_METBF|DTTP/UTP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ETPAPGMQP 10
E+P PGM P
Sbjct: 34 ESPCPGMHP 42


>sp|RS4E_THEAC|SMALL ribosomal subunit protein eS4|Thermoplasma acidophilum (strain

Query: 3 TPAPGMQP 10
TP PGM P
Sbjct: 26 TPNPGMHP 33


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ETPAPG 7
ETPAPG
Sbjct: 535 ETPAPG 540


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ETPAPGMQ 9
+TPAPG +
Sbjct: 175 QTPAPGFK 182


>sp|RS11_SULAC|SMALL ribosomal subunit protein uS11|Sulfolobus acidocaldarius (strain

Query: 1 AETPAPGMQP 10
++TP PG QP
Sbjct: 86 SKTPGPGAQP 95


>sp|RS11_SULTO|SMALL ribosomal subunit protein uS11|Sulfurisphaera tokodaii (strain

Query: 1 AETPAPGMQP 10
++TP PG QP
Sbjct: 86 SKTPGPGAQP 95


>sp|RS11_SACS2|SMALL ribosomal subunit protein uS11|Saccharolobus solfataricus (strain

Query: 1 AETPAPGMQP 10
++TP PG QP
Sbjct: 86 SKTPGPGAQP 95


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 2 ETPAPGM 8
ETP PG+
Sbjct: 93 ETPVPGI 99


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ETPAPGMQP 10
+TPAP P
Sbjct: 516 QTPAPATPP 524


>sp|RS11_METS5|SMALL ribosomal subunit protein uS11|Metallosphaera sedula (strain ATCC

Query: 2 ETPAPGMQP 10
+TP PG QP
Sbjct: 87 KTPGPGAQP 95


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 AETPAPGMQP 10
+E PAP QP
Sbjct: 303 SEIPAPAPQP 312


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 3 TPAPGMQP 10
TP+PG +P
Sbjct: 84 TPSPGSKP 91


>sp|RL4_HALWD|LARGE ribosomal subunit protein uL4|Haloquadratum walsbyi (strain DSM

Query: 1 AETPAPGMQP 10
AE APG QP
Sbjct: 222 AEDLAPGTQP 231


>sp|CAS1_HYPBU|CRISPR-ASSOCIATED endonuclease Cas1|Hyperthermus butylicus (strain DSM 5456

Query: 3 TPAPGMQP 10
TP PG QP
Sbjct: 183 TPFPGRQP 190


>sp|NTPPA_METAC|DTTP/UTP pyrophosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ETPAPGMQP 10
E P PG+ P
Sbjct: 34 EPPQPGLDP 42


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AETPAPG 7
A TPAPG
Sbjct: 283 APTPAPG 289


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 AETPAPG 7
A TPAPG
Sbjct: 283 APTPAPG 289


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 ETPAPGMQ 9
ETP PG Q
Sbjct: 354 ETPFPGTQ 361




124|SequenceR|625|616|PGKQVAETPA

>sp|Y1254_METJA|UNCHARACTERIZED protein MJ1254|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PGKQVAETPA 10
PG+ + E PA
Sbjct: 236 PGQNIIEQPA 245


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 PGKQVAETP 9
PGK A TP
Sbjct: 348 PGKAAAITP 356


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 PGKQVAETP 9
PGK A TP
Sbjct: 356 PGKAAAVTP 364


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 PGKQVAETP 9
PGK A TP
Sbjct: 351 PGKAAAVTP 359


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKQVAET 8
GK+VAET
Sbjct: 254 GKKVAET 260


>sp|RS2_NITMS|SMALL ribosomal subunit protein uS2|Nitrosopumilus maritimus (strain

Query: 2 GKQVAETP 9
G+Q AETP
Sbjct: 74 GRQYAETP 81


>sp|NIKR_METKA|PUTATIVE nickel-responsive regulator|Methanopyrus kandleri (strain AV19 /

Query: 1 PGKQVAE 7
PGK++AE
Sbjct: 111 PGKRIAE 117




125|SequenceR|630|621|PEVQVPGKQV

>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEVQVPGKQV 10
PE+Q+P K V
Sbjct: 338 PELQIPHKHV 347


>sp|FTSZ1_PYRWO|CELL division protein FtsZ 1|Pyrococcus woesei

Query: 1 PEVQVP 6
PEVQVP
Sbjct: 14 PEVQVP 19


>sp|FTSZ1_PYRFU|CELL division protein FtsZ 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEVQVP 6
PEVQVP
Sbjct: 20 PEVQVP 25


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EVQVPGKQV 10
+VQ+ GK+V
Sbjct: 268 DVQIEGKEV 276


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 2 EVQVPGKQV 10
+VQ PG+QV
Sbjct: 298 DVQRPGQQV 306


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 PEVQVPGKQV 10
PE VPG ++
Sbjct: 359 PEYAVPGVEI 368




126|SequenceR|635|626|EMPPPPEVQV

>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EMPPPPEV 8
+MP PPEV
Sbjct: 242 KMPDPPEV 249


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 MPPPPEV 8
+PPPPE+
Sbjct: 155 IPPPPEL 161


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PPPEVQV 10
PPPE+++
Sbjct: 294 PPPEIEI 300


>sp|PCNA_METTH|DNA polymerase sliding clamp|Methanothermobacter thermautotrophicus

Query: 1 EMPPPPEVQ 9
E P PPE++
Sbjct: 119 ETPSPPEIE 127


>sp|PUR5_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MPPPPEV 8
MP PP++
Sbjct: 247 MPDPPQI 253


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 1 EMPPPPEV 8
EM PPP V
Sbjct: 582 EMRPPPHV 589


>sp|GCH1_SACS2|GTP cyclohydrolase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|DCDA_THEAC|DIAMINOPIMELATE decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PPPPEVQV 10
P PPE+ +
Sbjct: 372 PRPPEIMI 379


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EMPPPPEVQ 9
E+PP P +Q
Sbjct: 133 EIPPTPAIQ 141


>sp|GCH1_SACI1|GTP cyclohydrolase 1|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|GCH1_SACI7|GTP cyclohydrolase 1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|GCH1_SACI6|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.4 /

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|GCH1_SACI4|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.14.25 /

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|GCH1_SACI3|GTP cyclohydrolase 1|Saccharolobus islandicus (strain M.16.27)

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|GCH1_SACI2|GTP cyclohydrolase 1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 PPPEVQV 10
PPP+++V
Sbjct: 56 PPPQIKV 62


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 EMPPPPEVQ 9
EMP P EV+
Sbjct: 956 EMPSPKEVK 964


>sp|Y011_METJA|UNCHARACTERIZED protein MJ0011|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PPPEVQ 9
PPPE++
Sbjct: 56 PPPEIR 61


>sp|IF2A_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter thermautotrophicus

Query: 5 PPEVQV 10
PPEVQ+
Sbjct: 177 PPEVQI 182


>sp|TBP_PYRIL|TATA-BOX-BINDING protein|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EMPPPPEVQV 10
E+P PEVQV
Sbjct: 92 EVPFDPEVQV 101


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EMPPPPEVQ 9
E PP PE +
Sbjct: 245 EKPPGPEAE 253


>sp|RL24_PICTO|LARGE ribosomal subunit protein uL24|Picrophilus torridus (strain ATCC

Query: 4 PPPEV 8
PPPEV
Sbjct: 105 PPPEV 109


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MPPPPEV 8
+PP PE+
Sbjct: 253 LPPTPEI 259


>sp|TBP_PYRCJ|TATA-BOX-BINDING protein|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EMPPPPEVQV 10
E+P PEVQ+
Sbjct: 92 EVPFDPEVQI 101


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 EMPPPPEVQV 10
+ P PPE+ V
Sbjct: 302 DAPVPPEILV 311




127|SequenceR|640|631|EMQAHEMPPP

>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 1 EMQAHEMP 8
E+ AHE+P
Sbjct: 381 ELTAHEIP 388




128|SequenceR|645|636|RIQAGEMQAH

>sp|PRIL_PYRFU|DNA primase large subunit PriL|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IQAGEMQAH 10
+QAGE++ H
Sbjct: 218 VQAGELKHH 226




129|SequenceR|650|641|EDPAPRIQAG

>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PAPRIQAG 10
P PRI+ G
Sbjct: 187 PVPRIEEG 194


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 3 PAPRIQAG 10
PAP +QAG
Sbjct: 134 PAPFLQAG 141


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 1 EDPAPRIQAG 10
EDP P+I G
Sbjct: 34 EDPLPQIFEG 43


>sp|BASB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 2 DPAPRIQAG 10
DP PR AG
Sbjct: 326 DPTPRAVAG 334




130|SequenceR|655|646|EMQVPEDPAP

>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EMQVPEDPAP 10
EM++ EDP P
Sbjct: 299 EMEIMEDPKP 308


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EMQVPEDPAP 10
EM++PE+P P
Sbjct: 510 EMKLPENPEP 519


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 MQVPEDPA 9
+ +PEDPA
Sbjct: 492 LYIPEDPA 499


>sp|FUMC_HALSA|FUMARATE hydratase class II|Halobacterium salinarum (strain ATCC 700922

Query: 1 EMQVPEDP 8
EMQVP D
Sbjct: 14 EMQVPADA 21


>sp|TBP_NATPD|TATA-BOX-BINDING protein|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EMQVPEDP 8
E+QV EDP
Sbjct: 90 EIQVDEDP 97


>sp|NAC_METTH|NASCENT polypeptide-associated complex protein|Methanothermobacter

Query: 1 EMQVPED 7
EM++PED
Sbjct: 76 EMEIPED 82


>sp|Y408_ARCFU|UNCHARACTERIZED protein AF_0408|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EMQVPEDP 8
E ++PEDP
Sbjct: 143 EGELPEDP 150


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EMQVPEDPAP 10
E +VPE P P
Sbjct: 270 EFEVPETPFP 279




131|SequenceR|660|651|GEQVVEMQVP

>sp|RS2_IGNH4|SMALL ribosomal subunit protein uS2|Ignicoccus hospitalis (strain

Query: 1 GEQVVEMQVP 10
GE+VVE+ +P
Sbjct: 6 GEKVVELLIP 15


>sp|OTSBH_THEAC|TREHALOSE-6-PHOSPHATE phosphatase-related protein|Thermoplasma acidophilum (strain ATCC

Query: 1 GEQVVEMQVP 10
G+ ++E++VP
Sbjct: 146 GKMIIELRVP 155


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQVVEMQVP 10
E++VE++VP
Sbjct: 90 EKIVEVRVP 98


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 GEQVVEMQ 8
GEQVVE++
Sbjct: 795 GEQVVELK 802


>sp|THYX_THEON|FLAVIN-DEPENDENT thymidylate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GEQVVEMQVP 10
GE+ VEM +P
Sbjct: 41 GEKDVEMHLP 50


>sp|MCRD_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 1 GEQVVEMQV 9
G+QV+E+++
Sbjct: 75 GDQVIELKI 83




132|SequenceR|665|656|EKQAPGEQVV

>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 KQAPGEQVV 10
K+APG++V+
Sbjct: 364 KEAPGKEVI 372


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KQAPGEQVV 10
K+APG++V+
Sbjct: 364 KEAPGKEVI 372


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KQAPGEQVV 10
K+APG++V+
Sbjct: 364 KEAPGKEVI 372


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 4 APGEQVV 10
APG+QV+
Sbjct: 44 APGKQVI 50


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 EKQAPGEQV 9
EK+A GE+V
Sbjct: 60 EKRASGEEV 68




133|SequenceR|670|661|VPPLLEKQAP

>sp|ADEC_CENSY|ADENINE deaminase|Cenarchaeum symbiosum (strain A)

Query: 1 VPPLLEKQA 9
+PP+L+K+A
Sbjct: 262 LPPMLKKEA 270


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 VPPLLEKQA 9
VPP+ E+Q
Sbjct: 302 VPPVAERQG 310


>sp|QUEC2_SULTO|7-CYANO-7-DEAZAGUANINE synthase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VPPLLEK 7
VPP+L+K
Sbjct: 135 VPPILDK 141




134|SequenceR|675|666|MQAPEVPPLL

>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MQAPEVPPL 9
M P++PPL
Sbjct: 262 MPEPDIPPL 270


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 MQAPEVPP 8
++ PE+PP
Sbjct: 145 IEKPEIPP 152


>sp|PUR5_METVS|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 PEVPPLL 10
PE+PP+
Sbjct: 263 PEIPPIF 269


>sp|SODM_HALMA|SUPEROXIDE dismutase [Mn]|Haloarcula marismortui (strain ATCC 43049

Query: 4 PEVPPL 9
PE+PPL
Sbjct: 7 PELPPL 12


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PEVPPLL 10
PE+PP L
Sbjct: 344 PEIPPTL 350


>sp|KHSE_PYRAE|HOMOSERINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PEVPPL 9
PEVPP+
Sbjct: 164 PEVPPM 169


>sp|Y1285_METTH|UNCHARACTERIZED HTH-type transcriptional regulator MTH_1285|Methanothermobacter

Query: 4 PEVPP 8
PEVPP
Sbjct: 88 PEVPP 92


>sp|PIMT_METBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcoides burtonii (strain DSM 6242

Query: 3 APEVPP 8
APEVPP
Sbjct: 145 APEVPP 150


>sp|HIS1_PYRCJ|ATP phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 MQAPEVPPL 9
M+AP V PL
Sbjct: 232 MEAPSVTPL 240


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 4 PEVPPL 9
PE+PPL
Sbjct: 330 PEMPPL 335




135|SequenceR|680|671|IQAGVMQAPE

>sp|NCPP_PYRIL|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum islandicum (strain

Query: 1 IQAGVMQA 8
I+AGV+QA
Sbjct: 72 IEAGVLQA 79




136|SequenceR|685|676|MHALVIQAGV

***** No hits found ******


137|SequenceR|690|681|PPPLEMHALV

>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PPPLEMHALV 10
PP EM+AL+
Sbjct: 177 PPKNEMNALI 186


>sp|CAS1_METJA|CRISPR-ASSOCIATED endonuclease Cas1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPPLEMHALV 10
PP EM+AL+
Sbjct: 177 PPKNEMNALI 186


>sp|CAS1_THEKO|CRISPR-ASSOCIATED endonuclease Cas1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPPLEMHALV 10
PP EM+AL+
Sbjct: 181 PPENEMNALI 190


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus vannielii

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 178 PLELHA 183


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 180 PLELHA 185


>sp|TRMY_METM7|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 178 PLELHA 183


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 178 PLELHA 183


>sp|TRMY_METJA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocaldococcus

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 181 PLELHA 186


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 182 PLELHA 187


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 PLEMHA 8
PLE+HA
Sbjct: 178 PLELHA 183


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 3 PLEMHALV 10
PLE H LV
Sbjct: 325 PLEHHTLV 332




138|SequenceR|695|686|QATEMPPPLE

>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 5 MPPPL 9
MPPPL
Sbjct: 4 MPPPL 8


>sp|THIL_NITMS|THIAMINE-MONOPHOSPHATE kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QATEMPPPLE 10
Q+T++PP ++
Sbjct: 43 QSTDIPPKMK 52


>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TEMPPPLE 10
TE+PP L+
Sbjct: 96 TELPPGLQ 103


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ATEMPPP 8
ATE PPP
Sbjct: 16 ATEPPPP 22




139|SequenceR|700|691|QAVETQATEM

***** No hits found ******


140|SequenceR|705|696|PAPGMQAVET

>sp|PFDA_METMA|PREFOLDIN subunit alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 APGMQAVET 10
A GMQA+ET
Sbjct: 124 AQGMQALET 132


>sp|DCDA_METTH|DIAMINOPIMELATE decarboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PAPGMQAVET 10
P P M AVET
Sbjct: 206 PEPFMLAVET 215


>sp|RS4E_METTH|SMALL ribosomal subunit protein eS4|Methanothermobacter

Query: 1 PAPGMQAVE 9
P+PG A+E
Sbjct: 32 PSPGPHAIE 40


>sp|PIMT_PYRNV|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PAPGMQAVET 10
P PGM+ +E
Sbjct: 70 PKPGMKILEV 79


>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PAPGMQAVET 10
P PGM+ +E
Sbjct: 70 PRPGMKILEV 79


>sp|PIMT_PYRIL|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PAPGMQAVET 10
P PGM+ +E
Sbjct: 70 PRPGMKILEV 79


>sp|PIMT_PYRCJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PAPGMQAVET 10
P PGM+ +E
Sbjct: 70 PRPGMKILEV 79


>sp|RL4_METB6|LARGE ribosomal subunit protein uL4|Methanoregula boonei (strain DSM

Query: 2 APGMQA 7
APGMQA
Sbjct: 226 APGMQA 231




141|SequenceR|710|701|QAPEMPAPGM

>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 4 EMPAPG 9
E+PAPG
Sbjct: 124 EVPAPG 129


>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 PEMPAPG 9
PE P+PG
Sbjct: 69 PEEPSPG 75




142|SequenceR|715|706|QAVEMQAPEM

>sp|KPRS_THEAC|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QAVEMQAPEM 10
+ VEM+AP++
Sbjct: 190 RTVEMKAPDI 199


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 4 EMQAPEM 10
EM+APE+
Sbjct: 66 EMEAPEL 72




143|SequenceR|720|711|PASEVQAVEM

>sp|GLYA_SACI6|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PASEVQAVEM 10
PA+ + AVEM
Sbjct: 272 PATAITAVEM 281


>sp|GLYA_SACI7|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275


>sp|GLYA_SACI3|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275


>sp|GLYA_SACI2|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275


>sp|GLYA_SACI1|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275


>sp|GLYA_SACI4|SERINE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PASEVQAVEM 10
PA+ V A+EM
Sbjct: 266 PATAVTAIEM 275




144|SequenceR|725|716|QVVQMPASEV

>sp|RL2_METAR|LARGE ribosomal subunit protein uL2|Methanocella arvoryzae (strain DSM

Query: 2 VVQMPASEV 10
VVQMP+ E+
Sbjct: 138 VVQMPSGEI 146




145|SequenceR|730|721|QVPEKQVVQM

>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 QVPEKQVVQM 10
QVPE+Q+V++
Sbjct: 167 QVPERQIVKV 176


>sp|CFBC_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 2 VPEKQVVQ 9
+P++QVVQ
Sbjct: 207 IPKRQVVQ 214


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VPEKQVVQM 10
+P+KQ+V M
Sbjct: 166 LPQKQIVAM 174


>sp|PSTB1_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 2 VPEKQVVQM 10
+PEKQV M
Sbjct: 76 IPEKQVTAM 84


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 2 VPEKQVVQ 9
+P+KQVV+
Sbjct: 157 IPDKQVVK 164


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PEKQVVQM 10
P+KQ+V M
Sbjct: 37 PKKQIVSM 44




146|SequenceR|735|726|PSLEMQVPEK

>sp|FTSZ1_PYRWO|CELL division protein FtsZ 1|Pyrococcus woesei

Query: 1 PSLEMQVPE 9
PS+E+ +PE
Sbjct: 357 PSIEISIPE 365


>sp|FTSZ1_PYRFU|CELL division protein FtsZ 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PSLEMQVPE 9
PS+E+ +PE
Sbjct: 363 PSIEISIPE 371


>sp|BRIX_METTH|PROBABLE Brix domain-containing ribosomal biogenesis|Methanothermobacter

Query: 1 PSLEMQVPE 9
PS EM+ PE
Sbjct: 77 PSFEMKKPE 85


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SLEMQVPEK 10
+L++QVPEK
Sbjct: 239 ALKLQVPEK 247


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 PSLEMQVP 8
PSLE+++P
Sbjct: 37 PSLEVEIP 44


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PSLEMQVP 8
P++EM++P
Sbjct: 199 PTVEMEIP 206


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PSLEMQVPE 9
PSL++++P+
Sbjct: 35 PSLDVEIPQ 43


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 PSLEMQVPE 9
PSL++++P+
Sbjct: 35 PSLDVEIPQ 43




147|SequenceR|740|731|VVEMPPSLEM

>sp|RNJ_PYRAB|RIBONUCLEASE J|Pyrococcus abyssi (strain GE5 /

Query: 1 VVEMPPSLE 9
VVE+P SLE
Sbjct: 442 VVEIPGSLE 450


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 1 VVEMPPSL 8
V+E+PP+L
Sbjct: 198 VIEVPPAL 205


>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC

Query: 3 EMPPSLEM 10
E+PP LE+
Sbjct: 82 ELPPGLEL 89


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VVEMPPSL 8
V+E+PP+L
Sbjct: 198 VIEVPPAL 205


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 VVEMPPSL 8
V+E+PP+L
Sbjct: 197 VIEVPPTL 204


>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VVEMPPSL 8
V+E+PP+L
Sbjct: 197 VIEVPPTL 204


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VVEMPPSL 8
V+E+PP+L
Sbjct: 197 VIEVPPTL 204




148|SequenceR|745|736|VPEKQVVEMP

>sp|MVK_ARCFU|MEVALONATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEKQVVEMP 10
PE++ VEMP
Sbjct: 150 PERRKVEMP 158


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 VPEKQVVEM 9
VPEKQ +EM
Sbjct: 49 VPEKQRLEM 57


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VPEKQVVEM 9
+P KQV+EM
Sbjct: 330 LPAKQVLEM 338


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VPEKQVVEMP 10
+PEK+ VE+P
Sbjct: 420 LPEKKEVELP 429


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 1 VPEKQVVEMP 10
+PE++ VE+P
Sbjct: 238 LPEREKVEIP 247


>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 VPEKQVVEM 9
VP++Q VEM
Sbjct: 51 VPDRQRVEM 59


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei (strain

Query: 1 VPEKQVVEMP 10
V EKQ VE+P
Sbjct: 103 VCEKQGVEIP 112


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 VPEKQVVEMP 10
+PE++ VE+P
Sbjct: 238 LPEREKVEIP 247


>sp|PSTB1_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 1 VPEKQVVEM 9
+PEKQV M
Sbjct: 76 IPEKQVTAM 84


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VPEKQVVEM 9
+PE ++VEM
Sbjct: 245 MPEARIVEM 253


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPEKQVVEM 9
+P+KQ+V M
Sbjct: 166 LPQKQIVAM 174


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PEKQVVEM 9
PEK +VEM
Sbjct: 481 PEKTLVEM 488


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 1 VPEKQVVEM 9
VPE+Q+V++
Sbjct: 168 VPERQIVKV 176


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 1 VPEKQVVEMP 10
VP +QV+E+P
Sbjct: 263 VPVEQVIEVP 272


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 1 VPEKQVVE 8
+P+KQVV+
Sbjct: 157 IPDKQVVK 164




149|SequenceR|750|741|SLEIQVPEKQ

>sp|Y293_THEAC|PUTATIVE esterase Ta0293|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SLEIQVPEKQ 10
S+EI+VP K+
Sbjct: 31 SIEIKVPLKE 40


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SLEIQVP 7
SLE+QVP
Sbjct: 119 SLEVQVP 125


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SLEIQVPEK 9
+L++QVPEK
Sbjct: 239 ALKLQVPEK 247


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 LEIQVPEK 9
LE+++PEK
Sbjct: 32 LEVEIPEK 39


>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 1 SLEIQVP 7
S+E+QVP
Sbjct: 129 SIEVQVP 135


>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SLEIQVPEKQ 10
SLE+Q+P Q
Sbjct: 133 SLEVQIPMLQ 142


>sp|Y1726_THEGJ|MEMO1 family protein TGAM_1726|Thermococcus gammatolerans (strain DSM

Query: 1 SLEIQVP 7
S+E+QVP
Sbjct: 129 SIEVQVP 135


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 2 LEIQVPE 8
LEI++PE
Sbjct: 448 LEIEIPE 454


>sp|RL6_SULAC|LARGE ribosomal subunit protein uL6|Sulfolobus acidocaldarius (strain

Query: 3 EIQVPEK 9
EIQ+P+K
Sbjct: 12 EIQIPDK 18


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 1 SLEIQVPEK 9
S++IQVP++
Sbjct: 332 SVQIQVPQR 340


>sp|ALBA2_AERPE|DNA/RNA-BINDING protein Alba 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LEIQVPEKQ 10
+E+Q PE Q
Sbjct: 74 IEVQTPEGQ 82




150|SequenceR|755|746|VEMPPSLEIQ

>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC

Query: 2 EMPPSLEI 9
E+PP LE+
Sbjct: 82 ELPPGLEL 89


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 4 PPSLEIQ 10
PP LE+Q
Sbjct: 110 PPELELQ 116


>sp|RS3_METKA|SMALL ribosomal subunit protein uS3|Methanopyrus kandleri (strain AV19 /

Query: 1 VEMPPSLEIQ 10
VE+P LEI+
Sbjct: 195 VELPDELEIR 204




151|SequenceR|760|751|PEKQVVEMPP

>sp|MVK_ARCFU|MEVALONATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEKQVVEMP 9
PE++ VEMP
Sbjct: 150 PERRKVEMP 158


>sp|DADD_METBU|5'-DEOXYADENOSINE deaminase|Methanococcoides burtonii (strain DSM 6242

Query: 1 PEKQVVEM 8
P KQV+EM
Sbjct: 331 PAKQVLEM 338


>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEKQVVEMPP 10
P +VE+PP
Sbjct: 479 PSYLIVELPP 488


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KQVVEMPP 10
K V+E PP
Sbjct: 210 KNVIEFPP 217


>sp|COBQ_HALMA|PROBABLE cobyric acid synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PEKQVVEMPP 10
PE+ V +PP
Sbjct: 232 PEEDSVALPP 241


>sp|CBIJ_METJA|COBALT-PRECORRIN-6A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PEKQVVEM 8
P+KQ+V M
Sbjct: 167 PQKQIVAM 174


>sp|NADA_SACS2|QUINOLINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PEKQVVEMPP 10
P K+++++PP
Sbjct: 162 PNKKIIKVPP 171


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 4 QVVEMPP 10
QV+E+PP
Sbjct: 197 QVIEVPP 203


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 1 PEKQVVEMP 9
PE++ VE+P
Sbjct: 239 PEREKVEIP 247


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PEKQVVEMP 9
PEK +VEM
Sbjct: 481 PEKTLVEMA 489


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 1 PEKQVVEMP 9
PE++ VE+P
Sbjct: 239 PEREKVEIP 247


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PEKQVVEMP 9
PEK+ VE+P
Sbjct: 421 PEKKEVELP 429


>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 QVVEMPP 10
QV+E+PP
Sbjct: 196 QVIEVPP 202




152|SequenceR|765|756|LEIKVPEKQV

>sp|Y293_THEAC|PUTATIVE esterase Ta0293|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LEIKVPEKQ 9
+EIKVP K+
Sbjct: 32 IEIKVPLKE 40


>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KVPEKQV 10
KVPE+Q+
Sbjct: 9 KVPEEQI 15


>sp|PSTB1_HALMA|PHOSPHATE import ATP-binding protein PstB|Haloarcula marismortui (strain

Query: 1 LEIKVPEKQV 10
+++ +PEKQV
Sbjct: 72 IDLAIPEKQV 81


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 LEIKVPEK 8
+EI+VPEK
Sbjct: 32 VEIRVPEK 39


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 LEIKVPEK 8
LE+++PEK
Sbjct: 32 LEVEIPEK 39


>sp|RS17_THEVO|SMALL ribosomal subunit protein uS17|Thermoplasma volcanium (strain

Query: 1 LEIKVPEKQ 9
L++ VPEK+
Sbjct: 8 LDVSVPEKE 16




153|SequenceR|770|761|EIPPSLEIKV

>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 IPPSLEIKV 10
+PP +E+KV
Sbjct: 26 LPPGIEVKV 34


>sp|NAC_METAC|NASCENT polypeptide-associated complex protein|Methanosarcina acetivorans

Query: 1 EIPPSLEI 8
E+P SLEI
Sbjct: 66 EVPKSLEI 73


>sp|HYPA_METBF|HYDROGENASE maturation factor HypA|Methanosarcina barkeri (strain Fusaro /

Query: 2 IPPSLEIKV 10
IPPSLE +
Sbjct: 67 IPPSLECEC 75


>sp|HYPA_METAC|HYDROGENASE maturation factor HypA|Methanosarcina acetivorans (strain ATCC

Query: 2 IPPSLEIKV 10
IPPSLE +
Sbjct: 67 IPPSLECEC 75


>sp|NAC_METMA|NASCENT polypeptide-associated complex protein|Methanosarcina mazei

Query: 1 EIPPSLEI 8
E+P SLEI
Sbjct: 73 EVPKSLEI 80


>sp|HEM3_METS5|PROBABLE porphobilinogen deaminase|Metallosphaera sedula (strain ATCC

Query: 1 EIPPSLEI 8
E+PP LE+
Sbjct: 82 ELPPGLEL 89


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 EIPPSLEIKV 10
E+ P LEIKV
Sbjct: 341 EVLPKLEIKV 350


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IPPSLEIKV 10
+PP EI+V
Sbjct: 685 VPPGREIRV 693


>sp|TBP_METST|TATA-BOX-BINDING protein|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EIPPSLEIKV 10
EIP EIK+
Sbjct: 90 EIPEEFEIKI 99


>sp|TBP_METS3|TATA-BOX-BINDING protein|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EIPPSLEIKV 10
EIP EIK+
Sbjct: 90 EIPHEFEIKI 99


>sp|PFDB_PYRAR|PREFOLDIN subunit beta|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EIPPSLE 7
+IPPSL+
Sbjct: 3 QIPPSLQ 9




154|SequenceR|775|766|EKQVVEIPPS

>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 QVVEIPPS 10
QV+E+PP+
Sbjct: 196 QVIEVPPT 203


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QVVEIPPS 10
QV+E+PP+
Sbjct: 197 QVIEVPPA 204


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 3 QVVEIPPS 10
QV+E+PP+
Sbjct: 197 QVIEVPPA 204


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 3 QVVEIPPS 10
QV+E+PP+
Sbjct: 196 QVIEVPPT 203


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QVVEIPPS 10
QV+E+PP+
Sbjct: 196 QVIEVPPT 203


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei (strain

Query: 1 EKQVVEIP 8
EKQ VEIP
Sbjct: 105 EKQGVEIP 112


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 EKQVVEIPP 9
EK+V +PP
Sbjct: 366 EKKVYPVPP 374


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KQVVEIPP 9
K V+E PP
Sbjct: 210 KNVIEFPP 217


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KQVVEIPPS 10
K+++E PPS
Sbjct: 182 KEIIEKPPS 190


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain

Query: 3 QVVEIPP 9
QVV++PP
Sbjct: 62 QVVDVPP 68


>sp|METK_ARCFU|S-ADENOSYLMETHIONINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKQVVEI 7
EKQV+EI
Sbjct: 15 EKQVIEI 21


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 KQVVEIPPS 10
KQV ++PP+
Sbjct: 495 KQVKDLPPT 503


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 QVVEIPPS 10
++VEIPP+
Sbjct: 183 KLVEIPPN 190


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 2 KQVVEIPP 9
++VVE+PP
Sbjct: 388 EKVVEVPP 395




155|SequenceR|780|771|EMQVPEKQVV

>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 2 MQVPEKQVV 10
MQVPE+Q+V
Sbjct: 166 MQVPERQIV 174


>sp|Y781_METJA|UNCHARACTERIZED protein MJ0781|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EMQVPEKQVV 10
E+Q+P K V+
Sbjct: 339 ELQIPHKHVI 348


>sp|RS4E_METAC|SMALL ribosomal subunit protein eS4|Methanosarcina acetivorans (strain

Query: 2 MQVPEKQVV 10
+ +P+KQVV
Sbjct: 155 LSIPDKQVV 163


>sp|RS4E_ARCFU|SMALL ribosomal subunit protein eS4|Archaeoglobus fulgidus (strain ATCC

Query: 2 MQVPEKQVV 10
+++PEK+VV
Sbjct: 155 LRIPEKEVV 163




156|SequenceR|785|776|MPPSLEMQVP

>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 2 PPSLEMQV 9
PPS+EM++
Sbjct: 55 PPSVEMRI 62


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 3 PSLEMQVP 10
PSLE+++P
Sbjct: 37 PSLEVEIP 44




157|SequenceR|790|781|KQVVGMPPSL

>sp|Y753_METJA|UNCHARACTERIZED protein MJ0753|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KQVVGMPPSL 10
K+V G+PPS+
Sbjct: 137 KEVYGIPPSV 146


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QVVGMPPSL 10
QV+G+PP L
Sbjct: 161 QVLGIPPEL 169


>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 KQVVGMPPSL 10
++ VG+PP L
Sbjct: 280 REAVGLPPPL 289


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KQVVGMPP 8
K+++G PP
Sbjct: 78 KRIIGFPP 85


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 4 VGMPPSL 10
VGMPP L
Sbjct: 405 VGMPPEL 411


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KQVVGMPPSL 10
++ GMPP L
Sbjct: 124 EKFTGMPPEL 133


>sp|RNP2_ARCFU|RIBONUCLEASE P protein component 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 GMPPSL 10
G+PPSL
Sbjct: 3 GLPPSL 8


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VVGMPPSL 10
+ G+PPSL
Sbjct: 102 IKGIPPSL 109


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 QVVGMPPS 9
Q+VG+PP+
Sbjct: 437 QLVGIPPA 444


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 3 VVGMPPSL 10
V G+PPSL
Sbjct: 18 VEGVPPSL 25


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QVVGMPPSL 10
QV+ +PP+L
Sbjct: 197 QVIEVPPAL 205


>sp|IF6_METAR|TRANSLATION initiation factor 6|Methanocella arvoryzae (strain DSM 22066

Query: 1 KQVVGMPPSL 10
+QVV +PP L
Sbjct: 21 EQVVVLPPDL 30


>sp|MAP2_THEON|METHIONINE aminopeptidase|Thermococcus onnurineus (strain NA1)

Query: 2 QVVGMPPSL 10
QV+ +PP+L
Sbjct: 197 QVIEVPPAL 205


>sp|MAP2_PYRAB|METHIONINE aminopeptidase|Pyrococcus abyssi (strain GE5 /

Query: 2 QVVGMPPSL 10
QV+ +PP+L
Sbjct: 196 QVIEVPPTL 204


>sp|RPO3_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum calidifontis (strain DSM

Query: 3 VVGMPPSL 10
V G+PPSL
Sbjct: 18 VEGVPPSL 25


>sp|RPO3_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum arsenaticum (strain DSM

Query: 3 VVGMPPSL 10
V G+PPSL
Sbjct: 18 VEGVPPSL 25


>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QVVGMPPSL 10
QV+ +PP+L
Sbjct: 196 QVIEVPPTL 204


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QVVGMPPSL 10
QV+ +PP+L
Sbjct: 196 QVIEVPPTL 204


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 5 GMPPSL 10
G+PPSL
Sbjct: 314 GLPPSL 319


>sp|UPPP_METKA|UNDECAPRENYL-DIPHOSPHATASE kandleri (strain AV19 /

Query: 2 QVVGMPPS 9
+V+G+PPS
Sbjct: 36 KVLGIPPS 43


>sp|RL11_NANEQ|LARGE ribosomal subunit protein uL11|Nanoarchaeum equitans (strain

Query: 1 KQVVGMPPS 9
K +VG+PP+
Sbjct: 65 KIIVGLPPT 73


>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 KQVVGMPPSL 10
KQ G PP+L
Sbjct: 153 KQQSGKPPAL 162


>sp|KPRS_METKA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanopyrus kandleri (strain AV19 /

Query: 1 KQVVGMPPSL 10
+Q+V +PP L
Sbjct: 36 EQIVRVPPEL 45




158|SequenceR|795|786|RQAPEKQVVG

>sp|Y1562_ARCFU|UNCHARACTERIZED protein AF_1562|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RQAPEKQVV 9
R+ PE+Q++
Sbjct: 8 RKVPEEQII 16


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QAPEKQVVG 10
QAPE VVG
Sbjct: 341 QAPEYTVVG 349


>sp|TRPD_THEVO|ANTHRANILATE phosphoribosyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 APEKQVVG 10
AP+K+V+G
Sbjct: 179 APKKRVIG 186


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QAPEKQVVG 10
QAPE VVG
Sbjct: 340 QAPEYTVVG 348


>sp|RS4E_THEKO|SMALL ribosomal subunit protein eS4|Thermococcus kodakarensis (strain

Query: 2 QAPEKQVV 9
Q PE+Q+V
Sbjct: 167 QVPERQIV 174


>sp|RNP2_METVS|RIBONUCLEASE P protein component 2|Methanococcus vannielii (strain ATCC 35089

Query: 4 PEKQVVG 10
P+K+VVG
Sbjct: 27 PQKEVVG 33




159|SequenceR|800|791|PPPPERQAPE

>sp|CAS2B_PYRAE|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PPPPERQ 7
PPPP R+
Sbjct: 80 PPPPARK 86


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 PPPPERQAP 9
P PP R P
Sbjct: 36 PSPPRRATP 44


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PPPERQAPE 10
P PER++PE
Sbjct: 183 PEPERESPE 191


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPPPERQAP 9
P PP+R AP
Sbjct: 19 PSPPQRTAP 27




160|SequenceR|805|796|LPPERPPPPE

>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPERPPPPE 10
PPE+PP E
Sbjct: 324 PPEQPPKNE 332


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 PPPPE 10
PPPPE
Sbjct: 156 PPPPE 160


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 3 PERPPPP 9
P RP PP
Sbjct: 505 PTRPSPP 511


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LPPERP 6
+PPERP
Sbjct: 157 VPPERP 162


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 PPERPPP 8
PPE PP
Sbjct: 146 PPELAPP 152


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPERPPPP 9
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PPERPPPPE 10
P E+P PE
Sbjct: 824 PAEKPATPE 832


>sp|SELD_METMP|SELENIDE, water dikinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LPPERPPP 8
+PPE P P
Sbjct: 96 IPPELPVP 103


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 LPPERPPP 8
+PP RP P
Sbjct: 35 IPPGRPIP 42


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PPERPPPP 9
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PPERPPPP 9
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PERPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PERPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPPERP 6
+PPERP
Sbjct: 155 VPPERP 160


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPERPPPP 9
PP P PP
Sbjct: 275 PPREPLPP 282


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 3 PERPPPPE 10
PERPP E
Sbjct: 175 PERPPIAE 182


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PERPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRC_THEKO|DIHYDROOROTASE kodakarensis (strain ATCC BAA-918

Query: 3 PERPPPPE 10
PERPP E
Sbjct: 179 PERPPEAE 186


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PERPPPP 9
P RP PP
Sbjct: 510 PGRPSPP 516


>sp|PYRC_PYRAB|DIHYDROOROTASE abyssi (strain GE5 /

Query: 3 PERPP 7
PERPP
Sbjct: 175 PERPP 179


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 3 PERPP 7
PERPP
Sbjct: 178 PERPP 182


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 1 LPPERP 6
LPP RP
Sbjct: 232 LPPRRP 237


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PERPPPP 9
P RP PP
Sbjct: 509 PYRPSPP 515


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PPERPPPPE 10
PP+RP P+
Sbjct: 72 PPQRPSIPD 80


>sp|AOCD_METJA|ORNITHINE cyclodeaminase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPPERP 6
+PPE+P
Sbjct: 157 IPPEKP 162


>sp|ABLB_METMA|BETA-LYSINE N(6)-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PPERPPPPE 10
PPE+ PE
Sbjct: 31 PPEKKDEPE 39




161|SequenceR|810|801|IPEMHLPPER

>sp|PINA_SACI5|HOLLIDAY junction branch migration ATPase|Saccharolobus islandicus (strain

Query: 3 EMHLPPE 9
+MHLPPE
Sbjct: 287 DMHLPPE 293


>sp|PINA_SULAC|HOLLIDAY junction branch migration ATPase|Sulfolobus acidocaldarius (strain

Query: 3 EMHLPPE 9
+MHLPPE
Sbjct: 289 DMHLPPE 295


>sp|MTIP_METAC|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanosarcina acetivorans

Query: 3 EMHLPPER 10
E+H+PP R
Sbjct: 57 EIHIPPHR 64


>sp|RSMA_METKA|PROBABLE ribosomal RNA small subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 MHLPPER 10
+HLPPER
Sbjct: 259 LHLPPER 265


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEMHLPP 8
P+ HLPP
Sbjct: 17 PQYHLPP 23


>sp|CETZ_PYRHO|TUBULIN-LIKE protein CetZ|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 HLPPER 10
H+PPER
Sbjct: 41 HIPPER 46


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IPEMHLPPE 9
IP M+L PE
Sbjct: 263 IPHMYLKPE 271


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IPEMHLPPE 9
IP M+L PE
Sbjct: 263 IPHMYLKPE 271


>sp|END4_THEVO|PROBABLE endonuclease 4|Thermoplasma volcanium (strain ATCC 51530

Query: 4 MHLPPER 10
+HL PER
Sbjct: 24 LHLAPER 30


>sp|SPSS_METMA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PEMHLPPER 10
PE HL P R
Sbjct: 137 PEYHLDPGR 145


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.16.4

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain M.14.25

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|NIFH2_METTL|NITROGENASE iron protein 2|Methanothermococcus thermolithotrophicus

Query: 1 IPEMHLPPE 9
+P HL PE
Sbjct: 221 VPNSHLIPE 229


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 IPEMHL 6
+PEMHL
Sbjct: 321 LPEMHL 326


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain ATCC

Query: 2 PEMHLPPER 10
PE +PP R
Sbjct: 434 PETDIPPRR 442


>sp|CETZ_PYRFU|TUBULIN-LIKE protein CetZ|Pyrococcus furiosus (strain ATCC 43587

Query: 5 HLPPER 10
H+PP+R
Sbjct: 41 HIPPDR 46


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain

Query: 4 MHLPPE 9
MH PPE
Sbjct: 65 MHYPPE 70


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 2 PEMHLPPER 10
PE LPP R
Sbjct: 427 PETDLPPVR 435


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 4 MHLPPE 9
MH PPE
Sbjct: 61 MHYPPE 66


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 4 MHLPPE 9
MH PPE
Sbjct: 61 MHYPPE 66


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 IPEMHLPPE 9
IP + LPPE
Sbjct: 435 IPSIFLPPE 443


>sp|PCNA_METBU|DNA polymerase sliding clamp|Methanococcoides burtonii (strain DSM 6242

Query: 1 IPEMHLPPE 9
IP++ LP E
Sbjct: 122 IPQLELPAE 130


>sp|RPO10_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo10|Aeropyrum pernix (strain ATCC 700893

Query: 4 MHLPPER 10
+H+PPER
Sbjct: 66 IHVPPER 72


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 2 PEMHLPPE 9
PE+ +PPE
Sbjct: 189 PELRMPPE 196


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans (strain

Query: 1 IPEMHLPPER 10
+PE PP R
Sbjct: 104 VPEKDAPPSR 113


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IPEMHLPPE 9
IPE LP E
Sbjct: 197 IPEFRLPKE 205




162|SequenceR|815|806|PPKKSIPEMH

>sp|CBIA_SULAC|COBYRINATE a,c-diamide synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KKSIPE 8
KKSIPE
Sbjct: 159 KKSIPE 164


>sp|Y1295_METJA|UNCHARACTERIZED protein MJ1295|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PKKSIPEM 9
P KSIP+M
Sbjct: 77 PPKSIPKM 84


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PPKKSIP 7
PP KS+P
Sbjct: 543 PPSKSLP 549


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 PKKSIPEMH 10
PKK I E+H
Sbjct: 232 PKKLIDELH 240


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 PKKSIPEMH 10
PKK I E+H
Sbjct: 232 PKKLIDELH 240


>sp|RS4E_SULTO|SMALL ribosomal subunit protein eS4|Sulfurisphaera tokodaii (strain DSM

Query: 2 PKKSIPEMH 10
PK+ +PEM+
Sbjct: 145 PKEKVPEMN 153


>sp|KTHY_METJA|PROBABLE thymidylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KKSIPEMH 10
KKS+ E+H
Sbjct: 169 KKSVEEVH 176


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 PPKKSIPEM 9
PP +++P++
Sbjct: 187 PPSRALPQL 195


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPKKSIPE 8
PP+KSI E
Sbjct: 93 PPEKSIVE 100




163|SequenceR|820|811|KDKRLPPKKS

>sp|Y672_PYRHO|UPF0252 protein PH0672|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 DKRLPPK 8
D+RLPPK
Sbjct: 150 DQRLPPK 156


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 KDKRLPPKKS 10
+D+R PP+++
Sbjct: 335 RDRREPPRRA 344


>sp|SYP_METTP|PROLINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KDKRLPPKKS 10
+D +LPPK +
Sbjct: 7 RDAKLPPKSN 16


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 KDKRLPPKKS 10
KD+++PP+ S
Sbjct: 406 KDRKIPPELS 415


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 3 KRLPPKK 9
++LPPKK
Sbjct: 259 EKLPPKK 265


>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 2 DKRLPP 7
DK+LPP
Sbjct: 208 DKKLPP 213


>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 3 KRLPPK 8
K+LPPK
Sbjct: 132 KKLPPK 137




164|SequenceR|825|816|NSKEKKDKRL

***** No hits found ******


165|SequenceR|830|821|RESQMNSKEK

***** No hits found ******


166|SequenceR|835|826|QEKRARESQM

>sp|RS3A_METAC|SMALL ribosomal subunit protein eS1|Methanosarcina acetivorans (strain

Query: 3 KRARESQM 10
KRAR SQM
Sbjct: 127 KRARSSQM 134


>sp|RS3A_METMA|SMALL ribosomal subunit protein eS1|Methanosarcina mazei (strain ATCC

Query: 3 KRARESQM 10
KRAR SQM
Sbjct: 127 KRARSSQM 134


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 EKRARES 8
EK+ARES
Sbjct: 276 EKKARES 282


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 RARESQM 10
+ARESQM
Sbjct: 42 KARESQM 48


>sp|Y086_METMP|PUTATIVE transcriptional regulatory protein MMP0086|Methanococcus

Query: 2 EKRARES 8
EKRARE+
Sbjct: 40 EKRAREN 46


>sp|Y1098_METVS|PUTATIVE transcriptional regulatory protein Mevan_1098|Methanococcus

Query: 2 EKRARES 8
EKRARE+
Sbjct: 40 EKRAREN 46




167|SequenceR|840|831|VEILVQEKRA

>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus (strain

Query: 1 VEILVQEKR 9
+E+LV EKR
Sbjct: 164 IEVLVAEKR 172




168|SequenceR|845|836|VPVLGVEILV

***** No hits found ******


169|SequenceR|850|841|LWSDKVPVLG

>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWSDKVPVL 9
+W DK+P++
Sbjct: 249 VWVDKIPMI 257


>sp|PUR2_METBF|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LWSDKVPVLG 10
LW +PV+G
Sbjct: 85 LWEAGIPVVG 94


>sp|PUR2_METAC|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LWSDKVPVLG 10
LW +PV+G
Sbjct: 87 LWEAGIPVVG 96


>sp|PUR2_METMA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LWSDKVPVLG 10
LW +PV+G
Sbjct: 87 LWDAGIPVVG 96


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 2 WSDKVPV 8
W D+VP+
Sbjct: 318 WKDEVPI 324


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WSDKVPVL 9
W D VPV+
Sbjct: 399 WKDYVPVM 406


>sp|Y1350_METJA|UNCHARACTERIZED protein MJ1350|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WSDKVPVL 9
+ DKVPVL
Sbjct: 132 YKDKVPVL 139


>sp|HIS6_METM6|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 WSDKVPVLG 10
W+ KV +LG
Sbjct: 177 WAKKVEILG 185


>sp|GLYA_HYPBU|SERINE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LWSDKVPVL 9
W +K+P+L
Sbjct: 4 FWQEKLPLL 12


>sp|MTD_METLZ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocorpusculum

Query: 2 WSDKVPVLG 10
W+D VP++
Sbjct: 224 WTDYVPIVA 232


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 LWSDKVPVL 9
LWS K+P L
Sbjct: 442 LWSTKLPCL 450


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 2 WSDKVPV 8
W D++P+
Sbjct: 307 WKDEIPI 313


>sp|NADM_METPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 2 WSDKVP 7
W D+VP
Sbjct: 140 WEDRVP 145


>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WSDKVPVL 9
W D++P++
Sbjct: 301 WGDRIPLI 308


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 DKVPVL 9
DKVPVL
Sbjct: 360 DKVPVL 365


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 DKVPVL 9
DKVPVL
Sbjct: 362 DKVPVL 367


>sp|FPRA_METAZ|COENZYME F420H(2) oxidase|Methanobrevibacter arboriphilus

Query: 1 LWSDKVPVLG 10
+W+D + V+G
Sbjct: 240 IWTDPMKVIG 249


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 WSDKVPV 8
W D++P+
Sbjct: 246 WGDRIPI 252


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 WSDKVPV 8
W D++P+
Sbjct: 246 WGDRIPI 252


>sp|Y34A_METJA|UNCHARACTERIZED protein MJ0347.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LWSDKV 6
LW+DK+
Sbjct: 43 LWNDKI 48


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 WSDKVPV 8
W +K+P+
Sbjct: 246 WGEKIPI 252


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LWSDKVPVLG 10
L+ KVP++G
Sbjct: 240 LFGHKVPIMG 249


>sp|RL32_ARCFU|LARGE ribosomal subunit protein eL32|Archaeoglobus fulgidus (strain

Query: 2 WSDKVPV 8
WS ++PV
Sbjct: 54 WSGRIPV 60


>sp|HIS4_METTH|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermobacter

Query: 2 WSDKVP 7
W++KVP
Sbjct: 140 WTEKVP 145




170|SequenceR|855|846|VSEKLLWSDK

>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SEKLLWSD 9
+EK+LW+D
Sbjct: 126 TEKILWAD 133


>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SEKLLWSD 9
+EKLLW D
Sbjct: 24 AEKLLWVD 31


>sp|RL4_THEON|LARGE ribosomal subunit protein uL4|Thermococcus onnurineus (strain NA1)

Query: 3 EKLLWSD 9
EK++W D
Sbjct: 98 EKIIWED 104


>sp|RL4_THEGJ|LARGE ribosomal subunit protein uL4|Thermococcus gammatolerans (strain

Query: 3 EKLLWSD 9
EK++W D
Sbjct: 98 EKIIWED 104


>sp|RL4_THEKO|LARGE ribosomal subunit protein uL4|Thermococcus kodakarensis (strain

Query: 3 EKLLWSD 9
EK++W D
Sbjct: 98 EKIIWED 104


>sp|RL4_PYRFU|LARGE ribosomal subunit protein uL4|Pyrococcus furiosus (strain ATCC

Query: 3 EKLLWSD 9
EK++W D
Sbjct: 98 EKIIWED 104


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 SEKLLWSDK 10
+EKL W D+
Sbjct: 24 TEKLAWVDE 32


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VSEKLLWSD 9
+S+KL+W D
Sbjct: 1 MSDKLVWID 9


>sp|THI4_METMP|THIAMINE thiazole synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SEKLLWSDK 10
EK +W+DK
Sbjct: 197 GEKSMWADK 205


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VSEKLLWSDK 10
++EK +W DK
Sbjct: 242 LTEKAIWLDK 251


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 KLLWSDK 10
K+LWS K
Sbjct: 440 KILWSTK 446


>sp|UPPS_SULAC|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (GGDP specific)|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VSEKLLWS 8
+ EK+LWS
Sbjct: 17 IYEKILWS 24




171|SequenceR|860|851|LDETSVSEKL

>sp|TRPD_METS3|ANTHRANILATE phosphoribosyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 LDETSVSEK 9
LDE SVS+K
Sbjct: 223 LDEISVSDK 231


>sp|Y338_HYPBU|UPF0200 protein Hbut_0338|Hyperthermus butylicus (strain DSM 5456

Query: 1 LDETSVSEKL 10
LDE +V EKL
Sbjct: 96 LDEVAVFEKL 105


>sp|DPHB_METB6|DIPHTHINE synthase|Methanoregula boonei (strain DSM 21154

Query: 2 DETSVSEK 9
D+T VSEK
Sbjct: 11 DKTDVSEK 18


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LDETSVSEK 9
+DE SV+EK
Sbjct: 261 VDEKSVAEK 269


>sp|AROC_METMP|CHORISMATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 LDETSVSEK 9
+DE S++EK
Sbjct: 278 IDENSINEK 286


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LDETSVSEK 9
+DE SV+EK
Sbjct: 257 VDEKSVAEK 265


>sp|Y053_NANEQ|UNCHARACTERIZED RNA methyltransferase NEQ053|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 LDETSVSEKL 10
L + S+SEKL
Sbjct: 248 LGDVSISEKL 257


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LDETSVSEK 9
+DE SV+EK
Sbjct: 261 VDEKSVAEK 269


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LDETSVSEK 9
+DE SV+EK
Sbjct: 261 VDEKSVAEK 269




172|SequenceR|865|856|PSPPSLDETS

>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PSPPSLDE 8
P PP LDE
Sbjct: 156 PPPPELDE 163


>sp|QUEC_METTH|7-CYANO-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PSPPSLDET 9
PSP +LD+T
Sbjct: 79 PSPSNLDDT 87


>sp|RS3_IGNH4|SMALL ribosomal subunit protein uS3|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PSPPSLDET 9
P P+L+ET
Sbjct: 224 PEAPTLEET 232


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PSPPSLDET 9
P PPS+ +T
Sbjct: 1104 PYPPSVQKT 1112


>sp|FOLD_PYRIL|BIFUNCTIONAL protein FolD|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PSPPSLDET 9
P PP +DET
Sbjct: 105 PLPPYVDET 113


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SPPSLDETS 10
+PPS+ ETS
Sbjct: 376 NPPSIQETS 384


>sp|NREA_ARCFU|DNA repair protein NreA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSPPSL 6
PSPPS+
Sbjct: 41 PSPPSI 46




173|SequenceR|870|861|EKPLPPSPPS

>sp|TRUA_THESM|TRNA pseudouridine synthase A|Thermococcus sibiricus (strain DSM 12597

Query: 1 EKPLPPSPP 9
+K LPP+PP
Sbjct: 208 DKKLPPAPP 216


>sp|TRUA_THEGJ|TRNA pseudouridine synthase A|Thermococcus gammatolerans (strain DSM

Query: 1 EKPLPPSPP 9
EK +PP+PP
Sbjct: 209 EKKVPPAPP 217


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 2 KPLPPSPP 9
K +PP+PP
Sbjct: 206 KKVPPAPP 213


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KPLPPSPP 9
+ +PP+PP
Sbjct: 206 RKVPPAPP 213


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPLPPSPP 9
K LPPSPP
Sbjct: 721 KGLPPSPP 728


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 EKPLPPSP 8
E P+PP+P
Sbjct: 685 EMPIPPAP 692


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 2 KPLPPSPP 9
K +PP+PP
Sbjct: 210 KKIPPAPP 217


>sp|CETZ6_HALVD|TUBULIN-LIKE protein CetZ6|Haloferax volcanii (strain ATCC 29605

Query: 1 EKPLPPSPPS 10
E+PLPP S
Sbjct: 237 ERPLPPRDTS 246


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 1 EKPLPPSP 8
E P+PP+P
Sbjct: 685 EMPIPPAP 692


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 EKPLPPSP 8
E P+PP+P
Sbjct: 685 EMPIPPAP 692


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EKPLPPSPPS 10
E P PPSP +
Sbjct: 40 ENPRPPSPAA 49


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 EKPLPPSPPS 10
E PL PSP +
Sbjct: 48 ENPLGPSPAA 57


>sp|Y238_METTH|UNCHARACTERIZED protein MTH_238|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 KPLPPSPPS 10
KP+PP+ S
Sbjct: 274 KPVPPTSES 282


>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 EKPLPPSPPS 10
E P+P +PP+
Sbjct: 442 EPPVPETPPA 451


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KPLPP 6
KPLPP
Sbjct: 127 KPLPP 131


>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KPLPPSP 8
+PL PSP
Sbjct: 513 RPLAPSP 519


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPLPPSP 8
+P PPSP
Sbjct: 191 RPAPPSP 197


>sp|THIL_PYRCJ|THIAMINE-MONOPHOSPHATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KPLPPSPPS 10
KPL P PP+
Sbjct: 178 KPLWPLPPA 186


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KPLPPSP 8
+PL PSP
Sbjct: 512 RPLSPSP 518


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LPPSPP 9
+PP PP
Sbjct: 828 IPPLPP 833


>sp|HIS8_METBU|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EKPLPPSPPS 10
E PL PSP +
Sbjct: 44 ENPLGPSPKA 53


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KPLPPSPP 9
K PPSPP
Sbjct: 234 KTPPPSPP 241


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EKPLPPSP 8
E P+PP+P
Sbjct: 567 EGPIPPTP 574


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 2 KPLPPSP 8
KP PP P
Sbjct: 1242 KPEPPKP 1248


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPLPPSPP 9
+PL P PP
Sbjct: 453 EPLVPEPP 460


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 4 LPPSPP 9
+PPSPP
Sbjct: 93 IPPSPP 98


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EKPLPPS 7
E P PPS
Sbjct: 37 ENPFPPS 43


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KPLPPSPP 9
K LPP PP
Sbjct: 725 KGLPPEPP 732


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 2 KPLPPS 7
KPLPP+
Sbjct: 54 KPLPPN 59


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 KPLPPSPPS 10
KP+PPS P+
Sbjct: 181 KPVPPSFPA 189


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 1 EKPLPPSPPS 10
++ +PP PPS
Sbjct: 374 QEMVPPRPPS 383




174|SequenceR|875|866|EERLNEKPLP

>sp|ARLY_NITMS|ARGININOSUCCINATE lyase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ERLNEKPL 9
ER+N+ PL
Sbjct: 182 ERINQSPL 189


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 1 EERLNEKPL 9
EERL+E+P+
Sbjct: 382 EERLSEEPV 390


>sp|RPIA_PICTO|RIBOSE-5-PHOSPHATE isomerase A|Picrophilus torridus (strain ATCC 700027

Query: 2 ERLNEKPLP 10
ERL++ PLP
Sbjct: 123 ERLHKFPLP 131


>sp|ARLY_HALMA|ARGININOSUCCINATE lyase|Haloarcula marismortui (strain ATCC 43049

Query: 2 ERLNEKPL 9
ER+N+ PL
Sbjct: 197 ERVNQNPL 204


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 4 LNEKPLP 10
+N+KPLP
Sbjct: 199 MNKKPLP 205


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 4 LNEKPLP 10
+N+KPLP
Sbjct: 199 MNKKPLP 205


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 LNEKPLP 10
+N+KPLP
Sbjct: 199 MNKKPLP 205


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 4 LNEKPLP 10
+N+KPLP
Sbjct: 199 MNKKPLP 205


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EERLNEKPLP 10
EE+L KP P
Sbjct: 117 EEKLGFKPYP 126


>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ERLNEKPLP 10
ER+ E P P
Sbjct: 187 ERIEETPFP 195


>sp|TRUA_NANEQ|TRNA pseudouridine synthase A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EERLNEKP 8
+ERLN KP
Sbjct: 186 KERLNPKP 193


>sp|SYE_NANEQ|GLUTAMATE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 ERLNEKPL 9
ERL +KPL
Sbjct: 454 ERLKQKPL 461


>sp|MRE11_METAC|DNA double-strand break repair protein|Methanosarcina acetivorans

Query: 5 NEKPLP 10
NEKP+P
Sbjct: 438 NEKPIP 443




175|SequenceR|880|871|QDGSAEERLN

>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GSAEERLN 10
GSA ERLN
Sbjct: 237 GSAAERLN 244




176|SequenceR|885|876|TNLLKQDGSA

>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 LLKQDGS 9
LL+QDGS
Sbjct: 513 LLRQDGS 519


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NLLKQDGSA 10
NL+KQD +A
Sbjct: 460 NLIKQDKAA 468


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 NLLKQD 7
NLLKQD
Sbjct: 634 NLLKQD 639


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 TNLLKQDGS 9
T++LK+DG+
Sbjct: 219 TSILKKDGT 227


>sp|TRPC_THEAC|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 TNLLKQDGS 9
T++LK+DG+
Sbjct: 219 TSILKRDGT 227




177|SequenceR|890|881|KNGEGTNLLK

>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 1 KNGEGTNLLK 10
K GEG N+L+
Sbjct: 25 KGGEGLNVLR 34


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 KNGEGTNLLK 10
+NGEGT L+
Sbjct: 131 RNGEGTASLE 140


>sp|Y1058_METJA|UNCHARACTERIZED protein MJ1058|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NGEGTNLLK 10
NGE NLLK
Sbjct: 263 NGELYNLLK 271


>sp|AATC_METMA|A-TYPE ATP synthase subunit C|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KNGEGTNL 8
KN E TNL
Sbjct: 330 KNNEATNL 337


>sp|COFC_METTH|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 NGEGTNLL 9
NG GTN L
Sbjct: 130 NGGGTNTL 137


>sp|FLAB1_AERPE|PROBABLE flagellin 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 NGEGTNLLK 10
NG+G N+L+
Sbjct: 143 NGDGDNVLE 151




178|SequenceR|895|886|QLPAEKNGEG

>sp|Y1136_SULTO|PUTATIVE ABC transporter ATP-binding protein|Sulfurisphaera tokodaii (strain

Query: 1 QLPAEKNGE 9
+LP EK GE
Sbjct: 322 KLPVEKRGE 330


>sp|RADA_SULTO|DNA repair and recombination protein|Sulfurisphaera tokodaii (strain

Query: 1 QLPAEKNGEG 10
QLP EK G G
Sbjct: 132 QLPLEKGGLG 141


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPAEKNGEG 10
LP EK EG
Sbjct: 458 LPEEKKSEG 466


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LPAEKNGE 9
LP E NGE
Sbjct: 219 LPVEVNGE 226


>sp|HUTI_HALSA|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 700922

Query: 1 QLPAEKNG 8
QLPA NG
Sbjct: 201 QLPAAANG 208


>sp|HUTI_HALS3|IMIDAZOLONEPROPIONASE salinarum (strain ATCC 29341

Query: 1 QLPAEKNG 8
QLPA NG
Sbjct: 201 QLPAAANG 208


>sp|RADA_SACI7|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SACI6|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SACI4|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SACI3|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SACI2|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SACI1|DNA repair and recombination protein|Saccharolobus islandicus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SACS2|DNA repair and recombination protein|Saccharolobus solfataricus (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 132 QLPPEKGG 139


>sp|RADA_SULAC|DNA repair and recombination protein|Sulfolobus acidocaldarius (strain

Query: 1 QLPAEKNG 8
QLP EK G
Sbjct: 129 QLPQEKGG 136




179|SequenceR|900|891|EAGVKQLPAE

>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 EAGVKQLPAE 10
+ GVK+LP E
Sbjct: 36 DTGVKELPYE 45


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAGVKQLPAE 10
E G++ LPA+
Sbjct: 385 ERGIRSLPAD 394


>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EAGVKQL 7
EAGV+QL
Sbjct: 256 EAGVRQL 262


>sp|SYC_METBF|CYSTEINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EAGVKQLPAE 10
E+G K++P E
Sbjct: 415 ESGKKEIPTE 424


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 AGVKQLPAE 10
AGV+++P++
Sbjct: 399 AGVREIPSD 407


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 EAGVKQLP 8
E+G++Q+P
Sbjct: 99 ESGIEQIP 106


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 EAGVKQLP 8
E+G++Q+P
Sbjct: 99 ESGIEQIP 106


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EAGVKQLP 8
E+G++Q+P
Sbjct: 99 ESGIEQIP 106


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EAGVKQLP 8
E+G++Q+P
Sbjct: 99 ESGIEQIP 106


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 EAGVKQLP 8
E+G++Q+P
Sbjct: 99 ESGIEQIP 106


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EAGVKQLP 8
E+G++Q+P
Sbjct: 99 ESGIEQIP 106


>sp|PHR_HALSA|DEOXYRIBODIPYRIMIDINE photo-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EAGVKQLPAE 10
+AG++QL AE
Sbjct: 335 DAGMRQLRAE 344


>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EAGVKQL 7
EAGVKQ+
Sbjct: 102 EAGVKQV 108




180|SequenceR|905|896|SEDAEEAGVK

>sp|Y2093_ARCFU|UNCHARACTERIZED protein AF_2093|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SEDAEEAGVK 10
SEDA+ AG+K
Sbjct: 188 SEDAKRAGLK 197


>sp|FDHA2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 SEDAEEAGVK 10
+EDA+E G+K
Sbjct: 600 TEDAKELGIK 609


>sp|SUI1_PYRAE|PROTEIN translation factor SUI1 homolog|Pyrobaculum aerophilum (strain

Query: 1 SEDAEEAGVK 10
SEDA++ G+K
Sbjct: 57 SEDAKQLGIK 66


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 EDAEEAGVK 10
EDAE+ G+K
Sbjct: 599 EDAEKMGIK 607


>sp|RL32_METAC|LARGE ribosomal subunit protein eL32|Methanosarcina acetivorans (strain

Query: 4 AEEAGVK 10
AEEAG+K
Sbjct: 115 AEEAGIK 121


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SEDAEEAGVK 10
SEDA +AG++
Sbjct: 840 SEDAVKAGLR 849


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EDAEEAG 8
+DAEEAG
Sbjct: 123 QDAEEAG 129


>sp|RL32_METMA|LARGE ribosomal subunit protein eL32|Methanosarcina mazei (strain ATCC

Query: 4 AEEAGVK 10
AEEAG+K
Sbjct: 115 AEEAGIK 121


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EDAEEAG 8
+DAEEAG
Sbjct: 123 QDAEEAG 129


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SEDAEEAGVK 10
+ED E GVK
Sbjct: 329 AEDVERQGVK 338


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 1 SEDAEEAGVK 10
+ED E+ GVK
Sbjct: 329 AEDVEKHGVK 338


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SEDAEEAG 8
S DA+EAG
Sbjct: 330 SADAQEAG 337




181|SequenceR|910|901|ALGPLSEDAE

>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 GPLSEDAE 10
GPL EDAE
Sbjct: 216 GPLYEDAE 223


>sp|SURE_METB6|5'-NUCLEOTIDASE SurE|Methanoregula boonei (strain DSM 21154

Query: 3 GPLSEDAE 10
GPL EDAE
Sbjct: 216 GPLLEDAE 223


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 1 ALGPLSED 8
ALG LSED
Sbjct: 218 ALGQLSED 225


>sp|RS4_KORCO|SMALL ribosomal subunit protein uS4|Korarchaeum cryptofilum (strain

Query: 1 ALGPLSEDA 9
ALG LS+DA
Sbjct: 78 ALGILSKDA 86


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 PLSEDAE 10
PL EDAE
Sbjct: 449 PLDEDAE 455


>sp|Y404_METJA|UNCHARACTERIZED protein MJ0404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGPLSEDAE 10
+GPL E+AE
Sbjct: 75 IGPLIEEAE 83


>sp|RL7A_METAC|LARGE ribosomal subunit protein eL8|Methanosarcina acetivorans (strain

Query: 2 LGPLSED 8
+GPLSE+
Sbjct: 64 IGPLSEE 70


>sp|RL7A_METMA|LARGE ribosomal subunit protein eL8|Methanosarcina mazei (strain ATCC

Query: 2 LGPLSED 8
+GPLSE+
Sbjct: 64 IGPLSEE 70


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 ALGPLSEDAE 10
A GPL+ DA+
Sbjct: 322 ANGPLTADAD 331


>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALGPLSEDAE 10
A GPL+ DA+
Sbjct: 319 ANGPLTADAD 328




182|SequenceR|915|906|ENINAALGPL

>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ENINAALGPL 10
E INAALG +
Sbjct: 96 EEINAALGAI 105


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NINAALGP 9
NIN LGP
Sbjct: 200 NINVVLGP 207


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum (strain

Query: 1 ENINAALG 8
E INAA+G
Sbjct: 125 EKINAAIG 132


>sp|Y792_METJA|UNCHARACTERIZED protein MJ0792|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INAALGP 9
I+AALGP
Sbjct: 65 ISAALGP 71


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ENINAALG 8
E+IN ALG
Sbjct: 287 EDINVALG 294


>sp|HIS4_METMA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina mazei (strain ATCC

Query: 1 ENINAALGPL 10
E INAALG +
Sbjct: 237 EAINAALGDI 246


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 NINAALGPL 10
NIN L PL
Sbjct: 3 NINVQLNPL 11




183|SequenceR|920|911|SIHTSENINA

***** No hits found ******


184|SequenceR|925|916|NQGSSSIHTS

***** No hits found ******


185|SequenceR|930|921|EPTNLNQGSS

>sp|FLAB5_PYRAB|FLAGELLIN B5|Pyrococcus abyssi (strain GE5 /

Query: 1 EPTNLNQ 7
EP NLNQ
Sbjct: 91 EPINLNQ 97


>sp|CDPAS_METMP|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain DSM 14266

Query: 4 NLNQGSS 10
NLNQG S
Sbjct: 116 NLNQGQS 122


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EPTNLN 6
EPTN+N
Sbjct: 71 EPTNVN 76


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPTNLN 6
EPTN+N
Sbjct: 369 EPTNVN 374


>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TNLNQGS 9
TN+N+GS
Sbjct: 140 TNINKGS 146




186|SequenceR|935|926|NLTEGEPTNL

>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 1 NLTEGEPTNL 10
++ EGEP N+
Sbjct: 15 SIIEGEPNNI 24


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 5 GEPTNL 10
GEPTNL
Sbjct: 139 GEPTNL 144


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NLTEGEPTNL 10
+L EG+PT++
Sbjct: 226 SLAEGKPTSI 235


>sp|Y692_METTH|UNCHARACTERIZED protein MTH_692|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LTEGEPTN 9
+ EG+PTN
Sbjct: 245 MHEGDPTN 252


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 GEPTNL 10
GEPTN+
Sbjct: 368 GEPTNV 373


>sp|AMPPA_METB6|AMP phosphorylase|Methanoregula boonei (strain DSM 21154

Query: 1 NLTEGE 6
NLTEGE
Sbjct: 72 NLTEGE 77


>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 2 LTEGEPTN 9
LTE EP N
Sbjct: 258 LTEDEPVN 265




187|SequenceR|940|931|TQHKGNLTEG

>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 TQHKGNLTE 9
T HKGN+T+
Sbjct: 1086 TMHKGNVTK 1094


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 4 KGNLTEG 10
+GNLTEG
Sbjct: 33 RGNLTEG 39


>sp|CAS1B_METHJ|PUTATIVE CRISPR-associated endonuclease Cas1 2|Methanospirillum hungatei

Query: 2 QHKGNLTE 9
QHKG +T+
Sbjct: 18 QHKGKITD 25


>sp|IF5A_THEKO|TRANSLATION initiation factor 5A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 KGNLTEG 10
KG LTEG
Sbjct: 110 KGQLTEG 116


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 4 KGNLTEG 10
KGNLT G
Sbjct: 35 KGNLTHG 41




188|SequenceR|945|936|CVISDTQHKG

>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CVISDTQHKG 10
CV+ T+H G
Sbjct: 213 CVVMSTKHLG 222


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CVISDTQHKG 10
CV+ T+H G
Sbjct: 213 CVVMSTKHLG 222


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CVISDTQHKG 10
CV+ T+H G
Sbjct: 213 CVVMSTKHLG 222


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CVISDTQHKG 10
CV+ T+H G
Sbjct: 213 CVVMSTKHLG 222


>sp|SYFB_THEAC|PHENYLALANINE--TRNA ligase beta subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CVISDTQ 7
CVI+DT+
Sbjct: 450 CVIADTR 456


>sp|CBID_SULAC|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CVISDTQHK 9
CV+ T HK
Sbjct: 196 CVVKSTGHK 204




189|SequenceR|950|941|DMKMECVISD

>sp|GLNK1_HALMT|NITROGEN regulatory protein GlnK1|Haloferax mediterranei (strain ATCC

Query: 2 MKMECVISD 10
+K+ECV++D
Sbjct: 69 VKIECVVAD 77


>sp|GLNK2_HALMT|NITROGEN regulatory protein GlnK2|Haloferax mediterranei (strain ATCC

Query: 2 MKMECVISD 10
+K+ECV++D
Sbjct: 70 VKVECVVAD 78


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 DMKMECVISD 10
D K+ECV D
Sbjct: 221 DGKLECVYVD 230




190|SequenceR|955|946|TNQDTDMKME

>sp|ARGC_METTH|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 QDTDMKME 10
QDTD+K E
Sbjct: 50 QDTDLKFE 57


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 1 TNQDTDMKM 9
TNQ TDM +
Sbjct: 249 TNQGTDMHL 257


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 1 TNQDTDMKM 9
TNQ TDM +
Sbjct: 249 TNQGTDMHL 257




191|SequenceR|960|951|TLNERTNQDT

>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 TLNERTNQD 9
T+ ERT+QD
Sbjct: 159 TVRERTDQD 167




192|SequenceR|965|956|TSNIGTLNER

>sp|MER_METTI|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanolobus tindarius

Query: 2 SNIGTLNE 9
S+IG+LNE
Sbjct: 75 SSIGSLNE 82


>sp|CBIA_METBF|COBYRINATE a,c-diamide synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 NIGTLNE 9
NIGTLN+
Sbjct: 403 NIGTLNK 409


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 TSNIGTLNER 10
++NIGT+ +R
Sbjct: 506 STNIGTIPDR 515


>sp|MTM7_METJA|PUTATIVE type II methyltransferase M.MjaORF1200P|Methanocaldococcus

Query: 4 IGTLNER 10
+GTLNE+
Sbjct: 88 LGTLNEK 94


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 SNIGTLNER 10
SN+ LNER
Sbjct: 251 SNLEVLNER 259


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SNIGTLNE 9
S IGT+NE
Sbjct: 75 SAIGTINE 82


>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC 43049

Query: 1 TSNIGTLNE 9
T+NIGT+ E
Sbjct: 282 TNNIGTVKE 290




193|SequenceR|970|961|VPEEVTSNIG

>sp|BIOB_NITMS|BIOTIN synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PEEVTSNI 9
PEEVT NI
Sbjct: 230 PEEVTINI 237


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 2 PEEVTSNIG 10
PE +TS +G
Sbjct: 417 PEHITSKLG 425


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PEEVTSNIG 10
PEE NIG
Sbjct: 148 PEETYENIG 156


>sp|MBHLB_PYRFU|MEMBRANE-BOUND hydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPEEVTSNIG 10
VPEE+ N G
Sbjct: 154 VPEEMVKNAG 163


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PEEVTSNIG 10
PE +TS +G
Sbjct: 402 PERITSKLG 410


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPEEVTSN 8
+PEE T N
Sbjct: 169 IPEETTKN 176


>sp|IF6_METHJ|TRANSLATION initiation factor 6|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VPEEVTSN 8
VPEEVT+
Sbjct: 30 VPEEVTTR 37


>sp|GSA_PICTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Picrophilus torridus (strain ATCC 700027

Query: 1 VPEEVTSNI 9
VPEE+T +
Sbjct: 164 VPEEITKTV 172




194|SequenceR|975|966|PLMPSVPEEV

>sp|Y2548_METHJ|PUTATIVE HTH-type transcriptional regulatory protein|Methanospirillum

Query: 1 PLMPSVPEEV 10
P MP VPEE+
Sbjct: 198 PEMPEVPEEI 207


>sp|GSA_THEAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PLMPSVPEEV 10
P P VPEEV
Sbjct: 159 PSSPGVPEEV 168


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PLMPSVPEEV 10
P+MP + EE+
Sbjct: 683 PIMPFIAEEI 692


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 3 MPSVPEEV 10
+P VPEEV
Sbjct: 554 LPKVPEEV 561


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLMPSVPEEV 10
P+MP + EE+
Sbjct: 683 PIMPFITEEI 692


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PLMPSV 6
PLMPSV
Sbjct: 355 PLMPSV 360


>sp|THIM_METPE|HYDROXYETHYLTHIAZOLE kinase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PLMPSVPEEV 10
P+M PEEV
Sbjct: 42 PVMAEAPEEV 51


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 2 LMPSVPEE 9
L+PS+PEE
Sbjct: 241 LIPSIPEE 248


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PLMPSVPEEV 10
P+MP + EE+
Sbjct: 663 PIMPFITEEL 672


>sp|COFH_HALMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Haloarcula marismortui (strain ATCC

Query: 3 MPSVPEEV 10
MP VPE V
Sbjct: 1 MPDVPETV 8


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PLMPSVPEE 9
P+M + PEE
Sbjct: 46 PIMANAPEE 54


>sp|GLMS_PYRHO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus horikoshii (strain ATCC

Query: 3 MPSVPEEV 10
+P VPEE+
Sbjct: 554 LPKVPEEL 561


>sp|RS3_SACS2|SMALL ribosomal subunit protein uS3|Saccharolobus solfataricus (strain

Query: 4 PSVPEEV 10
PSVP+EV
Sbjct: 199 PSVPQEV 205


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 PLMPSVPEEV 10
PL +P+E+
Sbjct: 541 PLFSKIPDEI 550


>sp|THIM_METMJ|HYDROXYETHYLTHIAZOLE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PLMPSVPEE 9
P+M PEE
Sbjct: 56 PVMAEAPEE 64


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PLMPSVPEEV 10
P+ P++P E+
Sbjct: 245 PIPPNIPSEI 254


>sp|URE1_HALWD|UREASE subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LMPSVPEEV 10
L P VPE+V
Sbjct: 324 LNPDVPEDV 332


>sp|TRPB2_AERPE|TRYPTOPHAN synthase beta chain 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LMPSVPEEV 10
++P +PEEV
Sbjct: 22 ILPDLPEEV 30


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 2 LMPSVPEE 9
+PS+PEE
Sbjct: 168 FIPSLPEE 175


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PLMPSVPEEV 10
P PS+P++V
Sbjct: 73 PQRPSIPDDV 82




195|SequenceR|980|971|EVASPPLMPS

>sp|PYRH_THEPD|URIDYLATE kinase|Thermofilum pendens (strain DSM 2475

Query: 4 SPPLMP 9
SPPL+P
Sbjct: 95 SPPLIP 100


>sp|Y952_ARCFU|UNCHARACTERIZED protein AF_0952|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VASPPL 7
VASPPL
Sbjct: 106 VASPPL 111




196|SequenceR|985|976|VAEREEVASP

>sp|DHQS_METMP|3-DEHYDROQUINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VAEREEVAS 9
+AE+EE++S
Sbjct: 32 IAEKEEISS 40




197|SequenceR|990|981|LATKSVAERE

>sp|RFCL_METJA|REPLICATION factor C large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LATKSVAERE 10
L TK+ AERE
Sbjct: 335 LLTKTKAERE 344




198|SequenceR|995|986|APPSALATKS

>sp|RS25_SACS2|SMALL ribosomal subunit protein eS25|Saccharolobus solfataricus (strain

Query: 3 PSALATKS 10
P ALATKS
Sbjct: 67 PYALATKS 74




199|SequenceR|1000|991|NAAMTAPPSA

>sp|Y1096_ARCFU|UNCHARACTERIZED protein AF_1096|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NAAMTAPPSA 10
N A APPSA
Sbjct: 40 NVAPAAPPSA 49




200|SequenceR|1005|996|IEQSENAAMT

***** No hits found ******


201|SequenceR|1010|1001|GEDEDIEQSE

>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 GEDEDIEQ 8
G +ED+EQ
Sbjct: 103 GSNEDVEQ 110


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 1 GEDEDIE 7
GE+EDIE
Sbjct: 45 GENEDIE 51


>sp|RRP4_METAC|EXOSOME complex component Rrp4|Methanosarcina acetivorans (strain ATCC

Query: 1 GEDEDIE 7
G+DEDIE
Sbjct: 182 GKDEDIE 188


>sp|RRP4_METMA|EXOSOME complex component Rrp4|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GEDEDIE 7
G+DEDIE
Sbjct: 182 GKDEDIE 188




202|SequenceR|1015|1006|EHSHIGEDED

>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EHSHIGE 7
EH+HIGE
Sbjct: 223 EHAHIGE 229


>sp|END4_HALSA|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 700922

Query: 1 EHSHIGE 7
EH+HIGE
Sbjct: 223 EHAHIGE 229


>sp|END4_HALS3|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 29341

Query: 1 EHSHIGE 7
EH+HIGE
Sbjct: 223 EHAHIGE 229


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EHSHIGE 7
EH+HIGE
Sbjct: 224 EHAHIGE 230


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 EHSHIGE 7
EH+HIGE
Sbjct: 224 EHAHIGE 230


>sp|PANB_HALSA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 EHSHIGEDED 10
EHSH+ +D D
Sbjct: 262 EHSHVADDVD 271


>sp|PANB_HALS3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 EHSHIGEDED 10
EHSH+ +D D
Sbjct: 262 EHSHVADDVD 271


>sp|RS8E_METB6|SMALL ribosomal subunit protein eS8|Methanoregula boonei (strain DSM

Query: 3 SHIGED 8
+HIGED
Sbjct: 34 THIGED 39


>sp|PDAD_METBU|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EHSHIGEDE 9
EH GEDE
Sbjct: 101 EHHSFGEDE 109


>sp|FAU1_PYRNV|PROBABLE ribonuclease FAU-1|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 HIGEDE 9
HIGE+E
Sbjct: 164 HIGEEE 169


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EHSHIGEDED 10
EH I E+ED
Sbjct: 8 EHIRIAENED 17


>sp|IF2P_META3|PROBABLE translation initiation factor IF-2|Methanococcus aeolicus (strain

Query: 4 HIGEDE 9
HIGED+
Sbjct: 545 HIGEDD 550




203|SequenceR|1020|1011|SLDSGEHSHI

>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 3 DSGEHSH 9
DSGEH H
Sbjct: 951 DSGEHLH 957


>sp|RL7A_CENSY|LARGE ribosomal subunit protein eL8|Cenarchaeum symbiosum (strain A)

Query: 2 LDSGEHSHI 10
LDSG+ HI
Sbjct: 101 LDSGDAQHI 109


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 2 LDSGEHSHI 10
+DSG HS I
Sbjct: 75 IDSGLHSQI 83


>sp|SFSA_THEAC|SUGAR fermentation stimulation protein homolog|Thermoplasma acidophilum

Query: 2 LDSGEHSHI 10
+DSG HS I
Sbjct: 75 IDSGLHSDI 83




204|SequenceR|1025|1016|ESMNDSLDSG

>sp|TYW3_THESM|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 ESMNDSLDSG 10
ES+ND+L+ G
Sbjct: 17 ESLNDALEKG 26


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ESMNDSLDSG 10
+ +ND+LD G
Sbjct: 161 QEINDALDEG 170


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 ESMNDSLDSG 10
+ +ND+LD G
Sbjct: 161 QEINDALDEG 170


>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESMNDSLDSG 10
+ +ND+LD G
Sbjct: 161 QEINDALDEG 170


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ESMNDSLDS 9
ESMN SLD+
Sbjct: 83 ESMNISLDN 91


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 MNDSLDSG 10
+ND+LD G
Sbjct: 163 INDALDEG 170


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 3 MNDSLDSG 10
+ND+LD G
Sbjct: 163 VNDALDEG 170


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 MNDSLDSG 10
+ND+LD G
Sbjct: 163 VNDALDEG 170


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 MNDSLDSG 10
+ND+LD G
Sbjct: 163 VNDALDDG 170


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 ESMNDSLDSG 10
E++ DSL+SG
Sbjct: 17 EAIVDSLESG 26




205|SequenceR|1030|1021|SDDSGESMND

***** No hits found ******


206|SequenceR|1035|1026|AGHLGSDDSG

>sp|CDC6G_HALMA|ORC1-TYPE DNA replication protein 7|Haloarcula marismortui (strain ATCC 43049

Query: 3 HLGSDD 8
H+GSDD
Sbjct: 150 HIGSDD 155


>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 AGHLGSDDS 9
AGH+ SD++
Sbjct: 111 AGHISSDEA 119


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AGHLGSDDS 9
AG++G DD+
Sbjct: 368 AGNVGKDDT 376


>sp|APGM_METMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGHLGSDDS 9
AGH+ SD++
Sbjct: 111 AGHISSDEA 119




207|SequenceR|1040|1031|QPVPRAGHLG

>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 4 PRAGHLG 10
PR GH+G
Sbjct: 32 PRVGHIG 38


>sp|AROK_PYRFU|SHIKIMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QPVPRAGHLG 10
+P+ +A HLG
Sbjct: 226 EPISKALHLG 235


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PVPRAGH 8
PVP GH
Sbjct: 163 PVPSKGH 169


>sp|PYRB_METMJ|ASPARTATE carbamoyltransferase catalytic subunit|Methanoculleus marisnigri

Query: 1 QPVPRAGHL 9
P+PRAG +
Sbjct: 258 HPLPRAGEI 266


>sp|NADA_THEON|QUINOLINATE synthase|Thermococcus onnurineus (strain NA1)

Query: 2 PVPRAGH 8
PVP GH
Sbjct: 166 PVPEYGH 172


>sp|NADA_METTH|QUINOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PVPRAGH 8
P+P GH
Sbjct: 166 PIPEEGH 172


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QPVPRAGH 8
+P+P GH
Sbjct: 90 EPIPLIGH 97


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 3 VPRAGH 8
+PRAGH
Sbjct: 152 LPRAGH 157


>sp|RS14Z_METJA|SMALL ribosomal subunit protein uS14|Methanocaldococcus jannaschii

Query: 1 QPVPRAGHLG 10
+P R GH+G
Sbjct: 15 RPCQRCGHVG 24


>sp|MPTA_HALSA|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 700922

Query: 3 VPRAGH 8
VP+AGH
Sbjct: 190 VPQAGH 195


>sp|MPTA_HALS3|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 29341

Query: 3 VPRAGH 8
VP+AGH
Sbjct: 190 VPQAGH 195


>sp|RL30_METBU|LARGE ribosomal subunit protein uL30|Methanococcoides burtonii (strain

Query: 4 PRAGHLG 10
PR GH G
Sbjct: 121 PRKGHAG 127


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 3 VPRAGHLG 10
V RAGH G
Sbjct: 61 VERAGHAG 68


>sp|RL30_METAC|LARGE ribosomal subunit protein uL30|Methanosarcina acetivorans (strain

Query: 4 PRAGHLG 10
PR GH G
Sbjct: 121 PRKGHAG 127


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 3 VPRAGHLG 10
V RAGH G
Sbjct: 61 VERAGHAG 68


>sp|RL30_METMA|LARGE ribosomal subunit protein uL30|Methanosarcina mazei (strain ATCC

Query: 4 PRAGHLG 10
PR GH G
Sbjct: 121 PRKGHAG 127


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain

Query: 3 VPRAGHLG 10
V RAGH G
Sbjct: 61 VERAGHAG 68




208|SequenceR|1045|1036|KRSSEQPVPR

>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 KRSSEQPVPR 10
+R E+P+PR
Sbjct: 360 QRGLERPLPR 369


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 KRSSEQPVPR 10
KR+SE P P+
Sbjct: 366 KRTSEYPRPK 375




209|SequenceR|1050|1041|AEKANKRSSE

>sp|Y456_ARCFU|UNCHARACTERIZED protein AF_0456|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AEKANKRSSE 10
AEKA +RS E
Sbjct: 4 AEKAKRRSIE 13




210|SequenceR|1055|1046|AKVALAEKAN

***** No hits found ******


211|SequenceR|1060|1051|FDGKAAKVAL

>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 3 GKAAKVAL 10
GKA K+AL
Sbjct: 38 GKAIKIAL 45


>sp|VAPC3_METJA|RIBONUCLEASE VapC3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FDGKAAKVA 9
FD K++K+A
Sbjct: 60 FDDKSSKIA 68


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 GKAAKVAL 10
GKAAK+ L
Sbjct: 181 GKAAKILL 188


>sp|MPGP_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GKAAKVAL 10
GKAAK+ L
Sbjct: 181 GKAAKILL 188




212|SequenceR|1065|1056|CFICVFDGKA

>sp|PURL_NATPD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FICVFDGK 9
++C FDG+
Sbjct: 344 YVCTFDGE 351


>sp|NDK_METPE|NUCLEOSIDE diphosphate kinase|Methanosphaerula palustris (strain ATCC

Query: 1 CFICVFDGK 9
CF+ V++GK
Sbjct: 70 CFLMVWEGK 78


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CFICVFDGK 9
CF+ V++GK
Sbjct: 70 CFLMVWEGK 78


>sp|MCRB_METVO|METHYL-COENZYME M reductase subunit beta|Methanococcus voltae

Query: 3 ICVFDGKA 10
IC+FD K
Sbjct: 8 ICLFDAKG 15


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 CVFDGK 9
CVFDG+
Sbjct: 348 CVFDGE 353


>sp|PURL_HALSA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 700922

Query: 2 FICVFDGK 9
++C FDG+
Sbjct: 338 YVCEFDGE 345


>sp|PURL_HALS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halobacterium salinarum (strain ATCC 29341

Query: 2 FICVFDGK 9
++C FDG+
Sbjct: 338 YVCEFDGE 345


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 ICVFDGKA 10
+ VFDGKA
Sbjct: 76 VYVFDGKA 83


>sp|Y1032_METJA|UNCHARACTERIZED protein MJ1032|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFICVF 6
C IC+F
Sbjct: 301 CLICIF 306


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ICVFDGK 9
ICV DGK
Sbjct: 24 ICVKDGK 30


>sp|IF5A_AERPE|TRANSLATION initiation factor 5A|Aeropyrum pernix (strain ATCC 700893

Query: 3 ICVFDGK 9
ICVF G+
Sbjct: 47 ICVFSGQ 53


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CFICVF 6
CF+CV
Sbjct: 46 CFLCVL 51


>sp|TFE_STAMF|TRANSCRIPTION factor E|Staphylothermus marinus (strain ATCC 43588

Query: 2 FICVFDGK 9
F+C +DG+
Sbjct: 118 FLCPYDGE 125


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 3 ICVFDGK 9
IC+FD +
Sbjct: 469 ICIFDNR 475


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 ICVFDGK 9
IC+FD +
Sbjct: 477 ICIFDNR 483


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 ICVFDGK 9
+CVF G+
Sbjct: 30 VCVFSGR 36


>sp|APBC_SACS2|IRON-SULFUR cluster carrier protein|Saccharolobus solfataricus (strain ATCC

Query: 2 FICVFDGK 9
F+C DGK
Sbjct: 220 FVCPSDGK 227


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 3 ICVFDGKA 10
I +FDGK+
Sbjct: 36 ILIFDGKS 43


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 2 FICVFDGK 9
++C F+G+
Sbjct: 344 YVCTFEGE 351


>sp|SYP_METB6|PROLINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 CFICVFDGKA 10
C IC GKA
Sbjct: 462 CIICGKPGKA 471


>sp|NDK_METMJ|NUCLEOSIDE diphosphate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 CFICVFDGKA 10
CF+ ++GK
Sbjct: 70 CFLMAWEGKG 79


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFICVFDGK 9
C + V DGK
Sbjct: 363 CIVAVKDGK 371




213|SequenceR|1070|1061|RFSRDCFICV

>sp|ARFB_METMP|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain DSM

Query: 3 SRDCFI 8
S+DCFI
Sbjct: 123 SKDCFI 128


>sp|ARFB_METM5|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus maripaludis (strain C5 /

Query: 3 SRDCFI 8
S+DCFI
Sbjct: 123 SKDCFI 128


>sp|GFCR_HALVD|TRANSCRIPTIONAL regulator GfcR|Haloferax volcanii (strain ATCC 29605

Query: 4 RDCFI 8
RDCFI
Sbjct: 149 RDCFI 153


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 4 RDCFIC 9
R CFIC
Sbjct: 91 RTCFIC 96


>sp|ENO_METST|ENOLASE stadtmanae (strain ATCC 43021

Query: 4 RDCFIC 9
+DC IC
Sbjct: 301 KDCLIC 306


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain

Query: 4 RDCFIC 9
R C+IC
Sbjct: 90 RSCYIC 95


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 5 DCFIC 9
DCF C
Sbjct: 24 DCFFC 28


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RFSRDCFICV 10
+FS CF+CV
Sbjct: 43 KFS--CFLCV 50


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 5 DCFIC 9
DCF+C
Sbjct: 84 DCFMC 88


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 3 SRDCFICV 10
+ DC ICV
Sbjct: 188 TNDCSICV 195


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 3 SRDCFICV 10
+ DC ICV
Sbjct: 188 TNDCSICV 195




214|SequenceR|1075|1066|YDKGKRFSRD

>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YDKGKRFSRD 10
YD GKR +R+
Sbjct: 236 YDTGKRIARE 245


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YDKGKRFSRD 10
YD GKR R+
Sbjct: 245 YDTGKRIVRE 254


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YDKGKRFSRD 10
YD GKR R+
Sbjct: 241 YDTGKRIVRE 250


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YDKGKRFSRD 10
YD GKR R+
Sbjct: 245 YDTGKRIVRE 254


>sp|SYK_THEAC|LYSINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YDKGKRFSRD 10
YD G+R +R+
Sbjct: 239 YDTGRRIARE 248


>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 3 KGKRFSRD 10
KG RF RD
Sbjct: 4 KGTRFERD 11


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YDKGKRFSRD 10
Y KG RF D
Sbjct: 156 YHKGGRFQAD 165


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain

Query: 1 YDKGKRFSRD 10
Y K +RF+ D
Sbjct: 31 YSKDRRFNED 40


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 YDKGKRFSRD 10
YD GKR ++
Sbjct: 245 YDTGKRIVKE 254


>sp|CHED_METM5|PROBABLE chemoreceptor glutamine deamidase CheD|Methanococcus maripaludis

Query: 1 YDKGKR 6
YDKGK+
Sbjct: 32 YDKGKK 37


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 DKGKRFSRD 10
++GKR +RD
Sbjct: 88 EEGKRVARD 96




215|SequenceR|1080|1071|NLHKSYDKGK

>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 NLHKSYDKG 9
NLH +YD+G
Sbjct: 109 NLHGTYDRG 117


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 NLHKSYDKG 9
NLH +YD+G
Sbjct: 114 NLHGNYDRG 122


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 3 HKSYDKG 9
H SYDKG
Sbjct: 118 HSSYDKG 124


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NLHKSYDKG 9
N+H +YD+G
Sbjct: 119 NIHGNYDRG 127


>sp|PHNC2_HALMA|PHOSPHONATES import ATP-binding protein PhnC|Haloarcula marismortui (strain

Query: 1 NLHKSYDKG 9
NL K+YD G
Sbjct: 6 NLEKTYDSG 14


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NLHKSYDKG 9
N+H YD+G
Sbjct: 113 NIHYQYDRG 121


>sp|RLME_METB6|RIBOSOMAL RNA large subunit methyltransferase|Methanoregula boonei (strain

Query: 3 HKSYDKGK 10
HKSYD+ +
Sbjct: 116 HKSYDQAR 123


>sp|PHNC_HALSA|PHOSPHONATES import ATP-binding protein PhnC|Halobacterium salinarum (strain

Query: 1 NLHKSY 6
NLHKSY
Sbjct: 8 NLHKSY 13


>sp|RNFB_METAC|ION-TRANSLOCATING oxidoreductase complex subunit B|Methanosarcina acetivorans (strain

Query: 2 LHKSYDKGK 10
L +S+DKGK
Sbjct: 199 LCRSHDKGK 207


>sp|RL30_HYPBU|LARGE ribosomal subunit protein uL30|Hyperthermus butylicus (strain DSM

Query: 2 LHKSYDKGK 10
LHK YDK K
Sbjct: 126 LHKLYDKQK 134


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 NLHKSYDKG 9
NLH+ D+G
Sbjct: 106 NLHQHKDRG 114


>sp|RPO1C_METMP|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus maripaludis (strain DSM

Query: 2 LHKSYDKGK 10
+ KSY++GK
Sbjct: 376 IDKSYEEGK 384


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 4 KSYDKGK 10
K YDKG+
Sbjct: 264 KEYDKGE 270


>sp|RFCL_HALSA|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 NLHKSYDKG 9
NLH + D+G
Sbjct: 109 NLHGNIDRG 117


>sp|RFCL_HALS3|REPLICATION factor C large subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 NLHKSYDKG 9
NLH + D+G
Sbjct: 109 NLHGNIDRG 117


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LHKSYDKGK 10
LH+S KGK
Sbjct: 110 LHESVPKGK 118


>sp|RS7_METM5|SMALL ribosomal subunit protein uS7|Methanococcus maripaludis (strain

Query: 1 NLHKSYDKGK 10
N KS+DK K
Sbjct: 39 NTKKSFDKAK 48


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 LHKSYDKGK 10
+H+ DKGK
Sbjct: 519 IHQIQDKGK 527


>sp|MPTA_PICTO|GTP cyclohydrolase MptA|Picrophilus torridus (strain ATCC 700027

Query: 1 NLHKSYDKGK 10
N+ K YD+GK
Sbjct: 197 NMLKRYDEGK 206




216|SequenceR|1085|1076|NVLHRNLHKS

>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 NVLHRNLHKS 10
+++H NLHKS
Sbjct: 260 DIVHFNLHKS 269


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 NVLHRNLHKS 10
+++H NLHKS
Sbjct: 260 DIVHFNLHKS 269


>sp|GCSPB_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NVLHRNLHKS 10
+V+H NLHK+
Sbjct: 265 DVVHLNLHKT 274


>sp|GCSPB_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 266 DIVHLNLHKT 275


>sp|GCSPB_PYRFU|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus furiosus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 265 DIVHLNLHKT 274


>sp|GCSPB_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 265 DIVHLNLHKT 274


>sp|GCSPB_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 265 DIVHLNLHKT 274


>sp|GCSPB_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 265 DIVHLNLHKT 274


>sp|GCSPB_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 265 DIVHLNLHKT 274


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 NVLHRNLHKS 10
+++H N+HK+
Sbjct: 262 DIMHFNVHKT 271


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 269 DIVHLNLHKT 278


>sp|GCSPB_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 NVLHRNLHKS 10
++ H NLHK+
Sbjct: 271 DIAHVNLHKT 280


>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 270 DIVHLNLHKT 279


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 270 DIVHLNLHKT 279


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 270 DIVHLNLHKT 279


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 270 DIVHLNLHKT 279


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 270 DIVHLNLHKT 279


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 NVLHRNLHKS 10
+++H NLHK+
Sbjct: 270 DIVHLNLHKT 279


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 NVLHRNLH 8
N +HR LH
Sbjct: 386 NFVHRTLH 393


>sp|PSB_METVS|PROTEASOME subunit beta|Methanococcus vannielii (strain ATCC 35089

Query: 1 NVLHRNLH 8
NVLH N H
Sbjct: 99 NVLHGNRH 106


>sp|PSB_METM7|PROTEASOME subunit beta|Methanococcus maripaludis (strain C7 /

Query: 1 NVLHRNLH 8
NVLH N H
Sbjct: 99 NVLHGNRH 106


>sp|PSB_METM6|PROTEASOME subunit beta|Methanococcus maripaludis (strain C6 /

Query: 1 NVLHRNLH 8
NVLH N H
Sbjct: 99 NVLHGNRH 106


>sp|PSB_METMP|PROTEASOME subunit beta|Methanococcus maripaludis (strain DSM 14266

Query: 1 NVLHRNLH 8
NVLH N H
Sbjct: 99 NVLHGNRH 106


>sp|IPYR_HALVD|INORGANIC pyrophosphatase|Haloferax volcanii (strain ATCC 29605

Query: 2 VLHRNLH 8
VLH N+H
Sbjct: 46 VLHSNVH 52


>sp|IPYR_HALSA|INORGANIC pyrophosphatase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VLHRNLH 8
VLH N+H
Sbjct: 46 VLHSNVH 52


>sp|PSB_METM5|PROTEASOME subunit beta|Methanococcus maripaludis (strain C5 /

Query: 1 NVLHRNLH 8
NVLH N H
Sbjct: 99 NVLHGNRH 106


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 1 NVLHRNLH 8
N+LH +LH
Sbjct: 47 NILHDSLH 54


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 NVLHRNLHKS 10
++ H N+HK+
Sbjct: 271 DIAHINIHKT 280




217|SequenceR|1090|1081|ELYYVNVLHR

>sp|G3P_METFO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium formicicum

Query: 1 ELYYVNVLHR 10
ELYY+ +H+
Sbjct: 293 ELYYMQAIHQ 302


>sp|G3P_METBR|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanobacterium bryantii

Query: 1 ELYYVNVLHR 10
ELYY+ +H+
Sbjct: 293 ELYYMQAIHQ 302


>sp|Y640_PYRHO|PUTATIVE phosphate permease PH0640|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LYYVNVLH 9
++Y+ VLH
Sbjct: 194 MFYIKVLH 201


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 2 LYYVNVLH 9
++Y+ VLH
Sbjct: 194 MFYIKVLH 201


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 2 LYYVNVLH 9
++Y+ VLH
Sbjct: 193 MFYIKVLH 200


>sp|Y1020_PYRFU|PUTATIVE phosphate permease PF1020|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LYYVNVLH 9
++Y+ VLH
Sbjct: 199 MFYIKVLH 206


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 2 LYYVNVLHR 10
LYYV +H+
Sbjct: 291 LYYVQAVHQ 299


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM

Query: 1 ELYYVNVL 8
ELYY+N L
Sbjct: 39 ELYYINDL 46




218|SequenceR|1097|1086|EQGQAAEELYYV

>sp|TNAA_AERPE|PROBABLE tryptophanase|Aeropyrum pernix (strain ATCC 700893

Query: 2 QGQAAEELYY 11
QG+AAE + Y
Sbjct: 104 QGRAAERILY 113


>sp|Y1432_METJA|UNCHARACTERIZED protein MJ1432|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EQGQAAEELYYV 12
++G+A + L+YV
Sbjct: 142 DKGKAIKNLHYV 153


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 QAAEELYYV 12
+++E+LYY+
Sbjct: 793 ESSEDLYYI 801


>sp|Y409_METJA|UNCHARACTERIZED protein MJ0409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EQGQAAEELYY 11
E+G +E +YY
Sbjct: 459 EEGAKSENVYY 469


>sp|ARLY_PYRAR|ARGININOSUCCINATE lyase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EQGQAAEELYY 11
E+G+ ELYY
Sbjct: 348 EKGRRDAELYY 358




THE END