REST_HUMAN Blast Output
Archaea
1|Sequence|1|10|MATQVMGQSS

***** No hits found ******


2|Sequence|6|15|MGQSSGGGGL

>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 MGQSSGGGGL 10
+GQ +GG GL
Sbjct: 117 LGQHAGGNGL 126


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 1 MGQSSGG 7
MGQ SGG
Sbjct: 7 MGQDSGG 13


>sp|HTR8_HALS3|TRANSDUCER protein Htr8|Halobacterium salinarum (strain ATCC 29341

Query: 1 MGQSSGGGG 9
MG+S+ GGG
Sbjct: 1 MGESARGGG 9


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MGQSSGGG 8
MGQS GG
Sbjct: 258 MGQSKKGG 265


>sp|PYCA_METTH|PYRUVATE carboxylase subunit A|Methanothermobacter thermautotrophicus

Query: 4 SSGGGGL 10
S+GGGG+
Sbjct: 160 SAGGGGI 166




3|Sequence|11|20|GGGGLFTSSG

>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGGGLFTSSG 10
GGGG T+SG
Sbjct: 294 GGGGRVTASG 303


>sp|HTR18_HALS3|TRANSDUCER protein Htr18|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGGGLFTSS 9
GGG + TSS
Sbjct: 149 GGGDVITSS 157


>sp|COBS_THEAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GGGGLFT 7
G GG+FT
Sbjct: 99 GAGGVFT 105




4|Sequence|16|25|FTSSGNIGMA

>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FTSSGNIGM 9
FT S NIG+
Sbjct: 183 FTDSSNIGL 191


>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 1 FTSSGNIGM 9
FT+S NIGM
Sbjct: 338 FTTSINIGM 346


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FTSSGNIGM 9
FT S NIG+
Sbjct: 183 FTDSTNIGL 191


>sp|SYW_PYRAE|TRYPTOPHAN--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FTSSGNIGM 9
FT S NIG+
Sbjct: 183 FTDSTNIGL 191


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 FTSSGNIGMA 10
F GN+GM+
Sbjct: 9 FIKMGNLGMS 18


>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 FTSSGNIGMA 10
F GN+GM+
Sbjct: 9 FIKMGNLGMS 18




5|Sequence|21|30|NIGMALPNDM

>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 NIGMALPNDM 10
N + LPNDM
Sbjct: 24 NAELGLPNDM 33


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 NIGMALPNDM 10
N + LPNDM
Sbjct: 24 NAELGLPNDM 33


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 NIGMALPNDM 10
N + LPNDM
Sbjct: 24 NAELGLPNDM 33


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 NIGMALPNDM 10
N + LPNDM
Sbjct: 24 NAELGLPNDM 33


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 NIGMALPNDM 10
N + LPNDM
Sbjct: 24 NAELGLPNDM 33


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 1 NIGMALPNDM 10
N + LPNDM
Sbjct: 24 NAELGLPNDM 33


>sp|BGAL_PYRWO|BETA-GALACTOSIDASE woesei

Query: 1 NIGMALPND 9
NIG+A P D
Sbjct: 278 NIGVAYPKD 286


>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NIGMALPNDM 10
N+G LP DM
Sbjct: 208 NMGPILPKDM 217


>sp|GSA_METLZ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 NIGMALPND 9
N+G LP+D
Sbjct: 204 NVGPVLPDD 212


>sp|GSA_METMJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NIGMALPND 9
N+G LP+D
Sbjct: 204 NVGPVLPDD 212


>sp|GSA_METB6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanoregula boonei (strain DSM 21154

Query: 1 NIGMALPND 9
NIG LP D
Sbjct: 204 NIGPVLPED 212


>sp|Y1401_SACS2|PUTATIVE CRISPR-associated protein SSO1401|Saccharolobus solfataricus

Query: 1 NIGMALPNDM 10
N+G+++ ND+
Sbjct: 27 NVGISIDNDV 36


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 NIGMALPND 9
N+G LP D
Sbjct: 212 NVGCILPQD 220


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 NIGMALPND 9
N+G LP D
Sbjct: 212 NVGCILPQD 220


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 NIGMALPND 9
N+G LP D
Sbjct: 212 NVGCILPKD 220


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NIGMALPND 9
N+G LP D
Sbjct: 212 NVGCILPKD 220




6|Sequence|26|35|LPNDMYDLHD

>sp|END4_METST|PROBABLE endonuclease 4|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LPNDMYDLH 9
LPN+MY+ H
Sbjct: 99 LPNNMYNFH 107


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 LPNDMYDLH 9
LP+D+ D+H
Sbjct: 111 LPSDVRDIH 119


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 LPNDMYDLH 9
LP+D+ D+H
Sbjct: 111 LPSDVRDIH 119


>sp|TRM56_METTP|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothrix thermoacetophila

Query: 1 LPNDMYDLHD 10
+P D+YD+ D
Sbjct: 112 VPPDVYDIAD 121


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum (strain

Query: 1 LPNDMYDLHD 10
+P D+Y+L D
Sbjct: 111 VPRDVYELAD 120


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 LPNDMYDLH 9
LP D+Y+ H
Sbjct: 164 LPYDLYEKH 172


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PNDMYDL 8
P D+YDL
Sbjct: 405 PGDVYDL 411


>sp|HOSA_SACS2|HOMOCITRATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPNDMYDLH 9
+PN YD+H
Sbjct: 190 VPNLEYDIH 198


>sp|TRM56_METLZ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocorpusculum labreanum

Query: 1 LPNDMYDLHD 10
+P D+Y+L D
Sbjct: 116 VPGDLYELAD 125


>sp|ARLY_METKA|ARGININOSUCCINATE lyase|Methanopyrus kandleri (strain AV19 /

Query: 1 LPNDMYDLHD 10
LP D D+H+
Sbjct: 78 LPEDAEDVHE 87


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 1 LPNDMYDLHD 10
+P YD+H+
Sbjct: 316 MPPGFYDIHE 325


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PNDMYDL 8
P D YDL
Sbjct: 405 PGDFYDL 411


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 LPNDMYD 7
+PND+Y+
Sbjct: 211 IPNDVYE 217


>sp|DGGGP_METVS|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 NDMYDL 8
ND+YDL
Sbjct: 58 NDIYDL 63


>sp|DGGGP_METMP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 NDMYDL 8
ND+YDL
Sbjct: 58 NDIYDL 63


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 3 NDMYDL 8
ND+YDL
Sbjct: 58 NDIYDL 63


>sp|DGGGP_METM6|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 3 NDMYDL 8
ND+YDL
Sbjct: 58 NDIYDL 63


>sp|DGGGP_METM5|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 3 NDMYDL 8
ND+YDL
Sbjct: 58 NDIYDL 63


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain

Query: 1 LPNDMYD 7
LP D YD
Sbjct: 4 LPRDFYD 10


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 3 NDMYDLHD 10
N +YD+HD
Sbjct: 590 NSIYDVHD 597


>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LPNDMYDLH 9
+P D YDL+
Sbjct: 10 IPEDYYDLY 18


>sp|PCCB_HALMT|PROPIONYL-COA carboxylase, carboxyltransferase subunit|Haloferax mediterranei

Query: 2 PNDMYDLHD 10
P YD+HD
Sbjct: 279 PRKPYDIHD 287


>sp|SRP54_METAR|SIGNAL recognition particle 54 kDa|Methanocella arvoryzae (strain DSM

Query: 3 NDMYD 7
NDMYD
Sbjct: 323 NDMYD 327


>sp|SYN_THEAC|ASPARAGINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LPNDMYD 7
LP D+YD
Sbjct: 53 LPEDVYD 59


>sp|URK_HALSA|URIDINE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 NDMYDLH 9
NDM DLH
Sbjct: 121 NDMLDLH 127


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 3 NDMYDLHD 10
ND++DL D
Sbjct: 19 NDLFDLSD 26


>sp|PYRB_HALWD|ASPARTATE carbamoyltransferase catalytic subunit|Haloquadratum walsbyi

Query: 3 NDMYDLHD 10
N YDLHD
Sbjct: 192 NIRYDLHD 199


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 DMYDLH 9
DMYD H
Sbjct: 451 DMYDSH 456




7|Sequence|31|40|YDLHDLSKAE

>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 YDLHDLSKA 9
Y+L DLSKA
Sbjct: 241 YELMDLSKA 249


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 YDLHDLSKA 9
YDL DLS A
Sbjct: 14 YDLEDLSIA 22


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 4 HDLSKAE 10
HD++KAE
Sbjct: 109 HDVNKAE 115


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 1 YDLHDLSKA 9
YDL+DL+ A
Sbjct: 14 YDLNDLAIA 22


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YDLHDLSKAE 10
+DLHD AE
Sbjct: 278 HDLHDPEYAE 287


>sp|THII_THEAC|TRNA sulfurtransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YDLHDLSKA 9
YD+ DLS A
Sbjct: 369 YDIDDLSVA 377


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YDLHDLSKA 9
YD++DL +A
Sbjct: 258 YDIYDLPEA 266


>sp|TRM1_THEKO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus kodakarensis

Query: 1 YDLHDLSKA 9
YD H L++A
Sbjct: 320 YDTHTLARA 328




8|Sequence|36|45|LSKAELAAPQ

>sp|HIS7_METAC|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KAELAAPQ 10
KAE A+PQ
Sbjct: 118 KAEFASPQ 125


>sp|HIS7_METBF|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 KAELAAPQ 10
KAE A+PQ
Sbjct: 118 KAEFASPQ 125




9|Sequence|41|50|LAAPQLIMLA

***** No hits found ******


10|Sequence|46|55|LIMLANVALT

***** No hits found ******


11|Sequence|51|60|NVALTGEVNG

>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VALTGEVN 9
+A+TGE+N
Sbjct: 363 LAITGEIN 370


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 NVALTGEVN 9
NV+ TG+VN
Sbjct: 3166 NVSATGQVN 3174




12|Sequence|56|65|GEVNGSCCDY

>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei JF-1

Query: 2 EVNGSCCD 9
EVNG CD
Sbjct: 101 EVNGIVCD 108


>sp|DPH2_PYRHO|2-(3-AMINO-3-CARBOXYPROPYL)HISTIDINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GEVNGSCCD 9
GE+N CD
Sbjct: 52 GEINYGACD 60


>sp|GLNA_HALSA|GLUTAMINE synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GEVNGS 6
GE+NGS
Sbjct: 246 GEINGS 251




13|Sequence|61|70|SCCDYLVGEE

>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SCCDYLVGEE 10
+C DYL GE+
Sbjct: 387 ACIDYLAGEK 396


>sp|PPS_METHJ|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 DYLVGEE 10
DYL+GEE
Sbjct: 42 DYLLGEE 48


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SCCDYLVGEE 10
+C D+L GE+
Sbjct: 387 ACIDFLAGEK 396


>sp|MTRH_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanopyrus kandleri (strain AV19 /

Query: 2 CCDYLV 7
CCDYL+
Sbjct: 274 CCDYLL 279


>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DYLVGEE 10
DYL+GE+
Sbjct: 49 DYLIGEK 55


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CDYLVGEE 10
CD+++G++
Sbjct: 147 CDFVIGQQ 154


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 4 DYLVGEE 10
DY+VG+E
Sbjct: 357 DYIVGDE 363


>sp|RNH2_HYPBU|RIBONUCLEASE HII|Hyperthermus butylicus (strain DSM 5456

Query: 1 SCCDYLVGEE 10
S DYL+GE+
Sbjct: 229 SLLDYLLGEK 238


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 SCCDYLVGEE 10
SC + +GEE
Sbjct: 447 SCATHTIGEE 456


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 4 DYLVGE 9
DYL+GE
Sbjct: 44 DYLIGE 49


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 DYLVGE 9
DYL+GE
Sbjct: 44 DYLIGE 49


>sp|PPS_METMA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 DYLVGE 9
DYL+GE
Sbjct: 44 DYLIGE 49


>sp|Y1602_METBF|UNCHARACTERIZED protein Mbar_A1602|Methanosarcina barkeri (strain Fusaro /

Query: 3 CDYLVGEE 10
C+YL+G +
Sbjct: 142 CNYLIGAD 149


>sp|P936_METJA|PHOSPHODIESTERASE MJ0936|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CCDYLVG 8
CC YL G
Sbjct: 140 CCGYLTG 146


>sp|MTRA2_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A 2|Methanothermobacter

Query: 4 DYLVGEE 10
DY+VG+E
Sbjct: 20 DYVVGDE 26


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 CDYLVGE 9
CDYL+ E
Sbjct: 119 CDYLIIE 125


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 3 CDYLV 7
CDYLV
Sbjct: 221 CDYLV 225


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 CCDYLV 7
C DYLV
Sbjct: 768 CADYLV 773


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 4 DYLVGEE 10
DYL+G E
Sbjct: 47 DYLIGPE 53


>sp|RNZ_NITMS|RIBONUCLEASE Z|Nitrosopumilus maritimus (strain SCM1)

Query: 3 CDYLV 7
CDYLV
Sbjct: 221 CDYLV 225


>sp|PUR5_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 CDYLVGEE 10
CD +GEE
Sbjct: 206 CDTTIGEE 213


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 CDYLVGEE 10
CD+LV ++
Sbjct: 231 CDFLVSDD 238




14|Sequence|66|75|LVGEERQMAE

>sp|RS8E_METKA|SMALL ribosomal subunit protein eS8|Methanopyrus kandleri (strain AV19

Query: 1 LVGEERQMAE 10
LVGEER++ E
Sbjct: 36 LVGEERKLKE 45


>sp|GCH1_SULTO|GTP cyclohydrolase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LVGEERQMA 9
+VG+ER++A
Sbjct: 104 IVGQERKVA 112




15|Sequence|71|80|RQMAELMPVG

>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RQMAELMPVG 10
R++AE +PVG
Sbjct: 348 RELAEEIPVG 357


>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QMAELMPVG 10
++ +LMP+G
Sbjct: 82 EIVDLMPIG 90


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 1 RQMAELMPVG 10
R +AEL+P G
Sbjct: 255 RAVAELVPPG 264




16|Sequence|76|85|LMPVGDNNFS

>sp|ENO_PYRAB|ENOLASE abyssi (strain GE5 /

Query: 1 LMPVGDNNF 9
+MP+G N+F
Sbjct: 168 IMPIGANSF 176


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LMPVGDNNFS 10
L+PV D+N +
Sbjct: 543 LLPVSDDNIT 552


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 1 LMPVGDNNFS 10
+MP+G ++FS
Sbjct: 169 IMPIGADSFS 178


>sp|PFDA_IGNH4|PREFOLDIN subunit alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LMPVGDNNF 9
L+P+G NF
Sbjct: 82 LVPIGAGNF 90


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LMPVGDNNFS 10
LM +GDN F+
Sbjct: 179 LMVLGDNTFT 188


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 LMPVGDNNFS 10
+M + DNNFS
Sbjct: 150 VMILNDNNFS 159




17|Sequence|81|90|DNNFSDSEEG

>sp|PGK_METS5|PHOSPHOGLYCERATE kinase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DNNFSDSEE 9
DN+F+D EE
Sbjct: 67 DNDFTDLEE 75


>sp|TRM1_THEVO|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermoplasma volcanium

Query: 1 DNNFSDSEEG 10
DN+F D EG
Sbjct: 237 DNSFKDVNEG 246


>sp|VORA_PYRAB|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus abyssi (strain GE5 /

Query: 1 DNNFSDSEEG 10
D NFS +EG
Sbjct: 323 DRNFSFGQEG 332


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 1 DNNFSDSEEG 10
D NFS +EG
Sbjct: 322 DRNFSFGQEG 331


>sp|VORA_PYRFU|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DNNFSDSEEG 10
D NFS +EG
Sbjct: 322 DRNFSFGQEG 331


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 1 DNNFSDSEEG 10
D++FSD E+G
Sbjct: 726 DSDFSDEEDG 735


>sp|CSG2_HALHT|CELL surface glycoprotein 2|Haloarcula hispanica (strain ATCC 33960

Query: 1 DNNFSDSEEG 10
D++FSD E+G
Sbjct: 728 DSDFSDEEDG 737


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NNFSDSEEG 10
NNF + EEG
Sbjct: 224 NNFENMEEG 232


>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 4 FSDSEEG 10
FS+SEEG
Sbjct: 79 FSESEEG 85




18|Sequence|86|95|DSEEGEGLEE

>sp|NPD_METKA|NAD-DEPENDENT protein deacylase|Methanopyrus kandleri (strain AV19 /

Query: 1 DSEEGEGLE 9
D E GEGLE
Sbjct: 135 DPERGEGLE 143


>sp|RNP4_SULAC|RIBONUCLEASE P protein component 4|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DSEEGEGL 8
DS+EG+G+
Sbjct: 99 DSKEGKGI 106




19|Sequence|91|100|EGLEESADIK

>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 EGLEESADI 9
EGLEES D+
Sbjct: 456 EGLEESTDL 464


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EGLEESADIK 10
EG++ES D+K
Sbjct: 583 EGVQESEDLK 592


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GLEESADIK 10
GLE ++DIK
Sbjct: 112 GLEHTSDIK 120


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 1 EGLEESADI 9
E LEE ADI
Sbjct: 200 EALEERADI 208


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 EGLEESADI 9
EGLEESA +
Sbjct: 214 EGLEESARL 222


>sp|TKSP_THEKO|SUBTILISIN-LIKE serine protease|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGLEESA 7
EGL+ESA
Sbjct: 140 EGLDESA 146


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 2 GLEESAD 8
GLEE+AD
Sbjct: 171 GLEETAD 177




20|Sequence|96|105|SADIKGEPHG

>sp|KUP_METHJ|PROBABLE potassium transport system protein|Methanospirillum hungatei JF-1

Query: 1 SADIKGEPHG 10
S DIK EP+G
Sbjct: 513 SLDIKDEPYG 522


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 SADIKGEPHG 10
+ADI GEP G
Sbjct: 302 NADIGGEPSG 311


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IKGEPH 9
+KGEPH
Sbjct: 797 VKGEPH 802


>sp|HIS7_HALWD|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ADIKGEPH 9
ADI G PH
Sbjct: 122 ADISGRPH 129


>sp|Y905_PICTO|UPF0215 protein PTO0905|Picrophilus torridus (strain ATCC 700027

Query: 1 SADIKGEPHG 10
+A I+GE HG
Sbjct: 175 TAIIRGESHG 184


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 4 IKGEPHG 10
IKGE HG
Sbjct: 54 IKGERHG 60


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 4 IKGEPHG 10
IKGE HG
Sbjct: 54 IKGERHG 60


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DIKGEP 8
D+KGEP
Sbjct: 49 DLKGEP 54


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 4 IKGEPH 9
I+GEPH
Sbjct: 34 IEGEPH 39


>sp|TRPD_HALWD|ANTHRANILATE phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ADIKGEP 8
AD+K EP
Sbjct: 129 ADVKAEP 135


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 1 SADIKGEPH 9
S D KGE H
Sbjct: 65 SFDFKGETH 73


>sp|AROK_METBU|SHIKIMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 IKGEPHG 10
I+G PHG
Sbjct: 50 IEGVPHG 56




21|Sequence|101|110|GEPHGLENME

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 GEPHGLENM 9
G PHG E +
Sbjct: 1346 GNPHGTETL 1354


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 GEPHGL 6
GEPH L
Sbjct: 129 GEPHSL 134


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 GEPHGL 6
GEPH L
Sbjct: 129 GEPHSL 134


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GEPHGL 6
G PHGL
Sbjct: 670 GRPHGL 675


>sp|ADH_SULAC|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GEPHGLENME 10
GEP LE+M+
Sbjct: 10 GEPLRLEDMD 19


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 EPHGLENME 10
+P+ LEN+E
Sbjct: 17 DPYTLENIE 25


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EPHGLENME 10
+P+ LEN+E
Sbjct: 17 DPYTLENIE 25


>sp|P538_METTH|PROTEIN MTH_538|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PHGLENM 9
P+GLEN+
Sbjct: 75 PYGLENV 81


>sp|RIBA_THEVO|GTP cyclohydrolase-2|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GEPHGLENM 9
G+P G EN+
Sbjct: 36 GDPRGKENV 44




22|Sequence|106|115|LENMELRSLE

***** No hits found ******


23|Sequence|111|120|LRSLELSVVE

***** No hits found ******


24|Sequence|116|125|LSVVEPQPVF

>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 5 EPQPVF 10
EPQPV+
Sbjct: 757 EPQPVY 762


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 5 EPQPVF 10
EPQPVF
Sbjct: 330 EPQPVF 335


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 5 EPQPVF 10
EPQP F
Sbjct: 332 EPQPAF 337


>sp|DP2S_HALSA|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 LSVVEPQPVF 10
+ + EPQP F
Sbjct: 346 VRLAEPQPAF 355


>sp|DP2S_HALS3|DNA polymerase II small subunit|Halobacterium salinarum (strain ATCC

Query: 1 LSVVEPQPVF 10
+ + EPQP F
Sbjct: 346 VRLAEPQPAF 355


>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 VVEPQPVF 10
+ EP+P+F
Sbjct: 526 IPEPEPIF 533


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LSVVEPQPV 9
L VVEP P+
Sbjct: 69 LDVVEPDPL 77




25|Sequence|121|130|PQPVFEASGA

>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PQPVFEA 7
PQPV+EA
Sbjct: 27 PQPVYEA 33


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PQPVFEAS 8
P PVFE +
Sbjct: 135 PSPVFEVT 142


>sp|DP2S_ARCFU|DNA polymerase II small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 PQPVFEA 7
PQP FE
Sbjct: 333 PQPAFEG 339


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PQPVFEASGA 10
P+ VFE +GA
Sbjct: 533 PEEVFEKNGA 542




26|Sequence|126|135|EASGAPDIYS

>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 2 ASGAPDIY 9
+SGA DIY
Sbjct: 172 SSGASDIY 179


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 2 ASGAPDIY 9
+SGA DIY
Sbjct: 172 SSGASDIY 179


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ASGAPDIY 9
A+ APDIY
Sbjct: 242 AATAPDIY 249


>sp|RFCL_PYRHO|REPLICATION factor C large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EASGAPDI 8
E SGAP+I
Sbjct: 114 EPSGAPEI 121


>sp|RNP3_METVS|RIBONUCLEASE P protein component 3|Methanococcus vannielii (strain ATCC 35089

Query: 2 ASGAPDIY 9
+SGA DIY
Sbjct: 172 SSGANDIY 179


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 2 ASGAPDIY 9
+SGA DIY
Sbjct: 172 SSGANDIY 179


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 2 ASGAPDIY 9
+SGA DIY
Sbjct: 172 SSGANDIY 179


>sp|RFCL_PYRAB|REPLICATION factor C large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 EASGAPDI 8
E SGAP+I
Sbjct: 114 EPSGAPEI 121


>sp|PSB1_PYRAB|PROTEASOME subunit beta 1|Pyrococcus abyssi (strain GE5 /

Query: 1 EASGAPDIYS 10
+A+GA D+Y+
Sbjct: 166 KAAGARDVYT 175


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ASGAPDIY 9
A APDIY
Sbjct: 242 AKDAPDIY 249


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EASGAPDIY 9
E SG P++Y
Sbjct: 17 ENSGIPELY 25




27|Sequence|131|140|PDIYSSNKDL

>sp|Y321_METJA|UNCHARACTERIZED protein MJ0321|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PDIYSSNKDL 10
PDIYS+NK++
Sbjct: 82 PDIYSNNKEI 91


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DIYSSNKDL 10
D Y +NKDL
Sbjct: 401 DFYEANKDL 409


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 PDIYSSNKD 9
PDI++ N D
Sbjct: 2 PDIFTDNTD 10


>sp|Y529_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0529|Methanocaldococcus

Query: 1 PDIYSSNKD 9
P IYS NKD
Sbjct: 217 PPIYSINKD 225


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 PDIYSSNKDL 10
P+IY N+D+
Sbjct: 332 PEIYEYNEDI 341


>sp|ACDG2_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 PDIYSSNKD 9
P IY++NKD
Sbjct: 185 PLIYAANKD 193


>sp|APE1_AERPE|HOMING endonuclease I-ApeI|Aeropyrum pernix (strain ATCC 700893

Query: 4 YSSNKD 9
YSSNKD
Sbjct: 30 YSSNKD 35


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DIYSSNKDL 10
D Y SNK+L
Sbjct: 402 DFYESNKEL 410


>sp|HYD1A_PYRFU|SULFHYDROGENASE 1 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DIYSSNKDL 10
++Y +NKDL
Sbjct: 289 ELYEANKDL 297


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 DIYSSNKDL 10
D Y SNK+L
Sbjct: 402 DFYESNKEL 410


>sp|DNLI_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PDIYSSNKD 9
P IYS N D
Sbjct: 311 PRIYSRNMD 319


>sp|MPTA1_METAR|GTP cyclohydrolase MptA 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 PDIYSSNKDL 10
PD+ +SN D+
Sbjct: 7 PDVQASNPDV 16


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 IYSSNKDL 10
IYS+N+DL
Sbjct: 407 IYSNNRDL 414


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 IYSSNKDL 10
IY+ NKD+
Sbjct: 279 IYNENKDV 286


>sp|CSG_METVS|S-LAYER protein|Methanococcus vannielii (strain ATCC 35089

Query: 2 DIYSSNKDL 10
DI+ +NKD
Sbjct: 177 DIFGTNKDF 185


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 PDIYSSNKDL 10
PD++ N+DL
Sbjct: 337 PDLHILNRDL 346


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PDIYSSNKDL 10
PD++S KDL
Sbjct: 335 PDMHSLCKDL 344


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 DIYSSNKDL 10
++YS NK+L
Sbjct: 393 NLYSRNKEL 401




28|Sequence|136|145|SNKDLPPETP

>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKDLPPETP 10
N LPP TP
Sbjct: 770 NFSLPPNTP 778


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 2 NKDLPPE 8
N DLPPE
Sbjct: 130 NLDLPPE 136


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKDLPPET 9
NKDL PET
Sbjct: 442 NKDLIPET 449


>sp|CBIH_METTH|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanothermobacter

Query: 5 LPPETP 10
LPP+TP
Sbjct: 178 LPPQTP 183


>sp|GGGPS_IGNH4|GERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KDLPPETP 10
K +PPE P
Sbjct: 143 KAIPPEKP 150


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKDLPPE 8
NK++PP+
Sbjct: 552 NKNIPPQ 558


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 5 LPPETP 10
LPP TP
Sbjct: 285 LPPNTP 290


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 5 LPPETP 10
LPP TP
Sbjct: 285 LPPNTP 290


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKDLPPET 9
NK++PP +
Sbjct: 113 NKEIPPNS 120


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 198 RKLPPEIP 205


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 203 EKLPPEVP 210


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 198 RKLPPEIP 205


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 KDLPPE 8
KD+PPE
Sbjct: 141 KDMPPE 146


>sp|RELE2_METJA|PUTATIVE toxin RelE2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKDLPPETP 10
NK+ PPE P
Sbjct: 37 NKNNPPEIP 45


>sp|HEM3_HALSA|PROBABLE porphobilinogen deaminase|Halobacterium salinarum (strain ATCC

Query: 1 SNKDLPPETP 10
S KD+P E P
Sbjct: 79 SMKDVPTEVP 88


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 203 EKLPPEVP 210


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 203 EKLPPEVP 210


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 3 KDLPPE 8
KD+PPE
Sbjct: 141 KDMPPE 146


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 200 RKLPPEVP 207


>sp|HTR2_HALMA|SENSORY rhodopsin II transducer|Haloarcula marismortui (strain ATCC 43049

Query: 1 SNKDLPP 7
SN++LPP
Sbjct: 103 SNEELPP 109


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 200 QKLPPEVP 207


>sp|PDXS_HALLT|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Halorubrum lacusprofundi (strain

Query: 1 SNKDLPPE 8
SN+DLP E
Sbjct: 287 SNEDLPDE 294


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 KDLPPETP 10
K LPPE P
Sbjct: 725 KGLPPEPP 732


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 3 KDLPPETP 10
+ LPPE P
Sbjct: 200 QKLPPEVP 207




29|Sequence|141|150|PPETPGAEDK

>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPETPGA 7
PP TPG+
Sbjct: 905 PPTTPGS 911


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 PPETPGAEDK 10
P PGAEDK
Sbjct: 244 PAPFPGAEDK 253


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PETPGAEDK 10
P TPGAE +
Sbjct: 324 PTTPGAERR 332


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PETPGAEDK 10
P TPGAE +
Sbjct: 327 PTTPGAERR 335


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PPETPGAED 9
PPE P ED
Sbjct: 168 PPELPITED 176


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PPETPGAEDK 10
PP TP EDK
Sbjct: 410 PPGTPQEEDK 419


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PPETPGAED 9
PPE P AED
Sbjct: 728 PPEPPKAED 736


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PGAEDK 10
PGAEDK
Sbjct: 41 PGAEDK 46


>sp|HIS51_METMP|IMIDAZOLE glycerol phosphate synthase subunit|Methanococcus maripaludis

Query: 2 PETPG 6
PETPG
Sbjct: 96 PETPG 100


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 PPETPGAEDK 10
P E PG ED+
Sbjct: 919 PEEAPGPEDR 928


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PPETPGAEDK 10
PP TP ED+
Sbjct: 406 PPGTPAKEDE 415




30|Sequence|146|155|GAEDKGKSSK

>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 AEDKGKSSK 10
AED+GK SK
Sbjct: 653 AEDRGKFSK 661


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AEDKGKSSK 10
AE++GK SK
Sbjct: 387 AEERGKPSK 395


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 GAEDKGK 7
GAE+KGK
Sbjct: 484 GAEEKGK 490




31|Sequence|151|160|GKSSKTKPFR

>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GKSSKTKPFR 10
GK + KPFR
Sbjct: 586 GKETSGKPFR 595


>sp|RS15_METMA|SMALL ribosomal subunit protein uS15|Methanosarcina mazei (strain ATCC

Query: 1 GKSSKTKPFR 10
GKSS T+P R
Sbjct: 10 GKSSSTRPNR 19


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 3 SSKTKPF 9
SSK KPF
Sbjct: 301 SSKRKPF 307


>sp|RS15_METAC|SMALL ribosomal subunit protein uS15|Methanosarcina acetivorans (strain

Query: 1 GKSSKTKPFR 10
GKSS T+P R
Sbjct: 10 GKSSSTRPIR 19


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 2 KSSKTKPFR 10
K SKTKP +
Sbjct: 35 KPSKTKPIQ 43


>sp|RS15_METBF|SMALL ribosomal subunit protein uS15|Methanosarcina barkeri (strain

Query: 1 GKSSKTKPFR 10
GKSS T+P R
Sbjct: 10 GKSSSTRPIR 19


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 GKSSKTKPF 9
G+S+ KPF
Sbjct: 389 GRSTSEKPF 397


>sp|MPNS_NITMS|METHYLPHOSPHONATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 SKTKPFR 10
SKT PFR
Sbjct: 116 SKTAPFR 122


>sp|RS15_METBU|SMALL ribosomal subunit protein uS15|Methanococcoides burtonii (strain

Query: 1 GKSSKTKPFR 10
GKS TKP R
Sbjct: 10 GKSGSTKPIR 19


>sp|RS15_SULTO|SMALL ribosomal subunit protein uS15|Sulfurisphaera tokodaii (strain

Query: 1 GKSSKTKPFR 10
GKS T+P R
Sbjct: 8 GKSHSTRPVR 17




32|Sequence|156|165|TKPFRCKPCQ

>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 KPFRCKPCQ 10
+PF C+ CQ
Sbjct: 36 QPFGCRYCQ 44


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 4 FRCKPCQ 10
FRCK C+
Sbjct: 368 FRCKKCR 374


>sp|SFSA_AERPE|SUGAR fermentation stimulation protein homolog|Aeropyrum pernix (strain

Query: 1 TKPFRCKPCQ 10
T P +C P Q
Sbjct: 228 TAPVQCPPLQ 237


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 6 CKPC 9
CKPC
Sbjct: 205 CKPC 208


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 4 FRCKPC 9
FRCK C
Sbjct: 374 FRCKKC 379


>sp|RS2_CALMQ|SMALL ribosomal subunit protein uS2|Caldivirga maquilingensis (strain

Query: 1 TKPFRCKPCQ 10
TKP+ KP Q
Sbjct: 83 TKPYAFKPIQ 92


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 4 FRCKPC 9
FRCK C
Sbjct: 374 FRCKKC 379


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 5 RCKPCQ 10
RC PC+
Sbjct: 169 RCMPCR 174


>sp|DNAJ_METAC|CHAPERONE protein DnaJ|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TKPFRCKPC 9
T P RC C
Sbjct: 156 TSPKRCPTC 164




33|Sequence|161|170|CKPCQYEAES

>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC

Query: 2 KPCQYEAE 9
KPC YE +
Sbjct: 3 KPCAYEKQ 10


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 3 PCQYEA 8
PC YEA
Sbjct: 213 PCLYEA 218


>sp|AMZA_SACI7|ARCHAEMETZINCIN islandicus (strain Y.G.57.14 /

Query: 1 CKPCQYEAES 10
CK C Y+ E+
Sbjct: 166 CKNCIYKIEN 175


>sp|AMZA_SACI6|ARCHAEMETZINCIN islandicus (strain M.16.4 /

Query: 1 CKPCQYEAES 10
CK C Y+ E+
Sbjct: 166 CKNCIYKIEN 175


>sp|AMZA_SACI4|ARCHAEMETZINCIN islandicus (strain M.14.25 /

Query: 1 CKPCQYEAES 10
CK C Y+ E+
Sbjct: 166 CKNCIYKIEN 175


>sp|AMZA_SACI3|ARCHAEMETZINCIN islandicus (strain M.16.27) (Sulfolobus

Query: 1 CKPCQYEAES 10
CK C Y+ E+
Sbjct: 166 CKNCIYKIEN 175


>sp|AMZA_SACI2|ARCHAEMETZINCIN islandicus (strain L.S.2.15 /

Query: 1 CKPCQYEAES 10
CK C Y+ E+
Sbjct: 166 CKNCIYKIEN 175


>sp|AMZA_SACI1|ARCHAEMETZINCIN islandicus (strain Y.N.15.51 /

Query: 1 CKPCQYEAES 10
CK C Y+ E+
Sbjct: 166 CKNCIYKIEN 175


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 1 CKPCQYEAE 9
CK C Y+AE
Sbjct: 333 CKKCGYKAE 341




34|Sequence|166|175|YEAESEEQFV

>sp|AATF_METTP|A-TYPE ATP synthase subunit F|Methanothrix thermoacetophila (strain DSM

Query: 1 YEAESEEQFV 10
YEA SEE+ +
Sbjct: 24 YEATSEEELI 33


>sp|RIB7_SACS2|2,5-DIAMINO-6-RIBOSYLAMINO-4(3H)-PYRIMIDINONE 5'-phosphate reductase|Saccharolobus solfataricus (strain ATCC

Query: 1 YEAESEEQFV 10
YE+E E+F+
Sbjct: 103 YESEKVEEFI 112


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 YEAESEEQ 8
Y AESEE+
Sbjct: 335 YAAESEEE 342




35|Sequence|171|180|EEQFVHHIRV

>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 EQFVHHIR 9
E VHH+R
Sbjct: 179 EDLVHHVR 186


>sp|ARGB_META3|ACETYLGLUTAMATE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EEQFVHHIRV 10
E +F+H +RV
Sbjct: 77 EPEFIHGLRV 86


>sp|RS2_HALWD|SMALL ribosomal subunit protein uS2|Haloquadratum walsbyi (strain DSM

Query: 2 EQFVHHIR 9
E+F+H +R
Sbjct: 114 ERFIHRVR 121


>sp|RS2_HALMA|SMALL ribosomal subunit protein uS2|Haloarcula marismortui (strain ATCC

Query: 2 EQFVHHIR 9
E+F+H +R
Sbjct: 102 ERFIHRVR 109


>sp|RS13_METTH|SMALL ribosomal subunit protein uS13|Methanothermobacter

Query: 1 EEQFVHHIRV 10
EE+F H +R+
Sbjct: 2 EEEFKHMVRI 11


>sp|Y704_METJA|UNCHARACTERIZED protein MJ0704|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EQFVHHIR 9
E FVHH++
Sbjct: 323 EIFVHHLK 330


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 EEQFVHHI 8
+EQ+++HI
Sbjct: 416 DEQYLYHI 423


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 EQFVHHI 8
E +VHHI
Sbjct: 204 ELYVHHI 210


>sp|TRUA_METS3|TRNA pseudouridine synthase A|Methanobrevibacter smithii (strain ATCC

Query: 1 EEQFVHHIR 9
EE+ ++H+R
Sbjct: 28 EEELIYHLR 36




36|Sequence|176|185|HHIRVHSAKK

>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 IRVHSAKK 10
+R+H AK+
Sbjct: 384 VRIHDAKR 391




37|Sequence|181|190|HSAKKFFVEE

>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 AKKFFVEE 10
+K+FFVEE
Sbjct: 172 SKEFFVEE 179


>sp|SYA_SULAC|ALANINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 AKKFFVEE 10
AK+FF EE
Sbjct: 172 AKEFFTEE 179


>sp|RL31_HALSA|LARGE ribosomal subunit protein eL31|Halobacterium salinarum (strain

Query: 1 HSAKKFFVEE 10
H AK+F V+E
Sbjct: 37 HLAKQFAVDE 46


>sp|RL31_HALS3|LARGE ribosomal subunit protein eL31|Halobacterium salinarum (strain

Query: 1 HSAKKFFVEE 10
H AK+F V+E
Sbjct: 37 HLAKQFAVDE 46




38|Sequence|186|195|FFVEESAEKQ

>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 1 FFVEESAEK 9
+F+E+ AEK
Sbjct: 91 YFIEKGAEK 99


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 1 FFVEESAEK 9
+F+E+ AEK
Sbjct: 91 YFIEKGAEK 99


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 1 FFVEESAEK 9
FFV E AEK
Sbjct: 207 FFVRELAEK 215




39|Sequence|191|200|SAEKQAKARE

***** No hits found ******


40|Sequence|196|205|AKARESGSST

>sp|TMCA_AERPE|TRNA(MET) cytidine acetyltransferase TmcA|Aeropyrum pernix (strain ATCC

Query: 1 AKARESGSS 9
A+ARESG+S
Sbjct: 514 AQARESGAS 522


>sp|RNZ_CENSY|RIBONUCLEASE Z|Cenarchaeum symbiosum (strain A)

Query: 2 KARESGSST 10
+ARE+G ST
Sbjct: 237 RARETGHST 245


>sp|HEM3_METBF|PROBABLE porphobilinogen deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KARESGSS 9
KARE GSS
Sbjct: 280 KARELGSS 287


>sp|RS19_HALSA|SMALL ribosomal subunit protein uS19|Halobacterium salinarum (strain

Query: 1 AKARESGS 8
A+ARESG+
Sbjct: 56 AEARESGT 63


>sp|RS19_HALS3|SMALL ribosomal subunit protein uS19|Halobacterium salinarum (strain

Query: 1 AKARESGS 8
A+ARESG+
Sbjct: 56 AEARESGT 63




41|Sequence|201|210|SGSSTAEEGD

>sp|RS15_METHJ|SMALL ribosomal subunit protein uS15|Methanospirillum hungatei JF-1

Query: 2 GSSTAEEG 9
GSSTAE G
Sbjct: 44 GSSTAEIG 51


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGSSTAEEG 9
SGS T +EG
Sbjct: 422 SGSRTVKEG 430




42|Sequence|206|215|AEEGDFSKGP

>sp|ILVC_METHJ|KETOL-ACID reductoisomerase (NADP(+))|Methanospirillum hungatei JF-1 (strain

Query: 1 AEEGDFSKGP 10
A+ GD ++GP
Sbjct: 254 AQFGDLTRGP 263


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 1 AEEGDFSKGP 10
A+ GD ++GP
Sbjct: 254 AQYGDLTRGP 263


>sp|ILVC_METB6|KETOL-ACID reductoisomerase (NADP(+))|Methanoregula boonei (strain DSM 21154

Query: 1 AEEGDFSKGP 10
A+ GD ++GP
Sbjct: 254 AQYGDMTRGP 263


>sp|Y1356_METJA|UNCHARACTERIZED protein MJ1356|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEEGDFSK 8
+EE DFSK
Sbjct: 21 SEEKDFSK 28


>sp|RS3A_THEGJ|SMALL ribosomal subunit protein eS1|Thermococcus gammatolerans (strain

Query: 4 GDFSKG 9
GDF+KG
Sbjct: 61 GDFTKG 66


>sp|RS3A_PYRHO|SMALL ribosomal subunit protein eS1|Pyrococcus horikoshii (strain ATCC

Query: 4 GDFSKG 9
GDF+KG
Sbjct: 59 GDFTKG 64


>sp|RS3A_THEKO|SMALL ribosomal subunit protein eS1|Thermococcus kodakarensis (strain

Query: 4 GDFSKG 9
GDF+KG
Sbjct: 61 GDFTKG 66


>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 1 AEEGDFSKGP 10
A+ GD ++GP
Sbjct: 254 AQYGDITRGP 263


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEGDFSK 8
+EG+FSK
Sbjct: 128 DEGEFSK 134


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 AEEGDFS 7
A+EGDFS
Sbjct: 440 AKEGDFS 446


>sp|RS3A_THEON|SMALL ribosomal subunit protein eS1|Thermococcus onnurineus (strain

Query: 4 GDFSKG 9
GDF+KG
Sbjct: 61 GDFTKG 66


>sp|RL13_NANEQ|LARGE ribosomal subunit protein uL13|Nanoarchaeum equitans (strain

Query: 2 EEGDFSKGP 10
+ GD+ KGP
Sbjct: 59 KRGDYYKGP 67


>sp|RS3A_THESM|SMALL ribosomal subunit protein eS1|Thermococcus sibiricus (strain DSM

Query: 4 GDFSKG 9
GDF+KG
Sbjct: 61 GDFTKG 66


>sp|HELS_AERPE|ATP-DEPENDENT DNA helicase Hel308|Aeropyrum pernix (strain ATCC 700893

Query: 4 GDFSKGP 10
GDF +GP
Sbjct: 107 GDFREGP 113


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 AEEGDFS 7
AEEGD++
Sbjct: 160 AEEGDYT 166


>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AEEGDFSKGP 10
A+ G+F GP
Sbjct: 124 ADGGEFGHGP 133




43|Sequence|211|220|FSKGPIRCDR

>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FSKGPIRC 8
FSKG ++C
Sbjct: 250 FSKGDVKC 257


>sp|COBD_METM5|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus maripaludis

Query: 1 FSKGPIR 7
FSK PIR
Sbjct: 107 FSKAPIR 113


>sp|RS14Z_NANEQ|SMALL ribosomal subunit protein uS14|Nanoarchaeum equitans (strain

Query: 1 FSKGPIRCDR 10
F KG RC+R
Sbjct: 26 FGKGARRCER 35


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FSKGPIRCDR 10
FSK I CD+
Sbjct: 597 FSKFVINCDK 606


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SKGPIRCD 9
S+GP+R D
Sbjct: 169 SEGPLRMD 176


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 2 SKGPIR 7
SKGP+R
Sbjct: 137 SKGPVR 142




44|Sequence|216|225|IRCDRCGYNT

>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 3 CDRCGYN 9
CDRCGY+
Sbjct: 244 CDRCGYS 250


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 RCDRCGY 8
RC RCGY
Sbjct: 150 RCSRCGY 156


Query: 1 IRCDRCG 7
++C RCG
Sbjct: 166 LKCQRCG 172


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCG 7
++CDRCG
Sbjct: 82 VKCDRCG 88


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 1 IRCDRCGY 8
++C RCGY
Sbjct: 370 LKCKRCGY 377


Query: 2 RCDRCG 7
+C RCG
Sbjct: 355 KCPRCG 360


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 IRCDRCGY 8
++C RCGY
Sbjct: 370 LKCKRCGY 377


>sp|RL37_THEAC|LARGE ribosomal subunit protein eL37|Thermoplasma acidophilum (strain

Query: 1 IRCDRCGYNT 10
IRC RCG++T
Sbjct: 18 IRCRRCGHHT 27


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 128 IRCPRCG 134


>sp|COFG_ARCFU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCDRCGYNT 10
RCD CG+ +
Sbjct: 21 RCDYCGFRS 29


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 2 RCDRCGYN 9
RC RCG N
Sbjct: 332 RCPRCGSN 339


Query: 1 IRCDRCGYNT 10
++C +CG T
Sbjct: 349 LKCPKCGLIT 358


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 3 CDRCGY 8
CD+CGY
Sbjct: 1060 CDQCGY 1065


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC 51178

Query: 3 CDRCGY 8
CD+CGY
Sbjct: 1061 CDQCGY 1066


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 3 CDRCGY 8
CD+CGY
Sbjct: 1061 CDQCGY 1066


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RCDRCG 7
+CDRCG
Sbjct: 433 KCDRCG 438


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 RCDRCGYNT 10
RC+ CG+ T
Sbjct: 617 RCNSCGFET 625


Query: 2 RCDRCG 7
RC +CG
Sbjct: 1012 RCQKCG 1017


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RCDRCG 7
RCD+CG
Sbjct: 433 RCDKCG 438


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 1 IRCDRCGY 8
+ C+RCGY
Sbjct: 62 VVCERCGY 69


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 2 RCDRCG 7
+CDRCG
Sbjct: 155 QCDRCG 160


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RCDRCG 7
+CDRCG
Sbjct: 153 QCDRCG 158


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 2 RCDRCG 7
RCD+CG
Sbjct: 172 RCDQCG 177


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 2 RCDRCGYNT 10
+CD+CGY+
Sbjct: 394 KCDKCGYSV 402


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 323 LRCPECGY 330


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 IRCDRCGYN 9
+ C CGYN
Sbjct: 153 LNCGHCGYN 161


>sp|RL37_METTH|LARGE ribosomal subunit protein eL37|Methanothermobacter

Query: 1 IRCDRCGYNT 10
IRC RCG N+
Sbjct: 16 IRCRRCGKNS 25


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IRCDRCG 7
+RC++CG
Sbjct: 504 VRCEKCG 510


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 IRCDRCGY 8
++C +CGY
Sbjct: 371 LKCKKCGY 378


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IRCDRCG 7
+RC++CG
Sbjct: 504 VRCNKCG 510


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|RL37_METS5|LARGE ribosomal subunit protein eL37|Metallosphaera sedula (strain ATCC

Query: 1 IRCDRCGYNT 10
IRC RCG N+
Sbjct: 17 IRCRRCGRNS 26


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 2 RCDRCGYNT 10
RC CGY +
Sbjct: 622 RCTSCGYES 630


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CDRCGYNT 10
C RCG+ T
Sbjct: 246 CPRCGFQT 253


>sp|RL37_CENSY|LARGE ribosomal subunit protein eL37|Cenarchaeum symbiosum (strain A)

Query: 1 IRCDRCGYNT 10
IRC RCG N+
Sbjct: 18 IRCRRCGKNS 27


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RCDRCGY 8
RC CGY
Sbjct: 475 RCSSCGY 481


Query: 1 IRCDRCG 7
++C RCG
Sbjct: 512 LKCPRCG 518


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 2 RCDRCG--YNT 10
RC +CG YNT
Sbjct: 383 RCPKCGRRYNT 393


>sp|RL37_THEPD|LARGE ribosomal subunit protein eL37|Thermofilum pendens (strain DSM

Query: 1 IRCDRCGYNT 10
IRC RCG+++
Sbjct: 18 IRCRRCGHHS 27


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IRCDRCGY 8
I C RCGY
Sbjct: 24 IVCARCGY 31


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 1 IRCDRCGY 8
I C RCGY
Sbjct: 24 IVCARCGY 31


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RCDRCGY 8
RC +CG+
Sbjct: 129 RCSKCGF 135


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RCDRCGY 8
RC +CG+
Sbjct: 129 RCSKCGF 135


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 CDRCGY 8
C++CGY
Sbjct: 74 CEKCGY 79


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RCDRCGY 8
RC CGY
Sbjct: 207 RCSYCGY 213


Query: 2 RCDRCG 7
RC RCG
Sbjct: 183 RCARCG 188


>sp|SYG_METMP|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IRCDRCG 7
IRC +CG
Sbjct: 126 IRCPKCG 132


>sp|SYG_METJA|GLYCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCG 7
IRC +CG
Sbjct: 128 IRCPKCG 134


>sp|IF2B_METB6|TRANSLATION initiation factor 2 subunit|Methanoregula boonei (strain DSM 21154

Query: 1 IRCDRCG 7
+RCD CG
Sbjct: 122 LRCDACG 128


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 1 IRCDRCGYNT 10
+RC +CG T
Sbjct: 626 VRCPKCGMPT 635


>sp|RL37_SULAC|LARGE ribosomal subunit protein eL37|Sulfolobus acidocaldarius (strain

Query: 1 IRCDRCGYNT 10
+RC RCG N+
Sbjct: 17 VRCRRCGRNS 26


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCDRCG 7
+CD+CG
Sbjct: 144 KCDKCG 149


>sp|RL37_SULTO|LARGE ribosomal subunit protein eL37|Sulfurisphaera tokodaii (strain

Query: 1 IRCDRCGYNT 10
+RC RCG N+
Sbjct: 17 VRCRRCGRNS 26


>sp|RL37_METST|LARGE ribosomal subunit protein eL37|Methanosphaera stadtmanae (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 16 IRCRRCGRNA 25


>sp|Y012_METJA|TNPB-LIKE protein MJ0012|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCG 7
++CD+CG
Sbjct: 98 VKCDKCG 104


>sp|RL37_SACI7|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|RL37_SACI6|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|RL37_SACI4|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|RL37_SACI3|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|RL37_SACI2|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|NPD_AERPE|NAD-DEPENDENT protein deacylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RCDRCG 7
RC RCG
Sbjct: 125 RCTRCG 130


>sp|RL37_SACS2|LARGE ribosomal subunit protein eL37|Saccharolobus solfataricus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|RL37_SACI1|LARGE ribosomal subunit protein eL37|Saccharolobus islandicus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N
Sbjct: 17 IRCRRCGRNA 26


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 3 CDRCGYNT 10
C+RCG T
Sbjct: 71 CERCGTET 78


>sp|RL40_METAC|LARGE ribosomal subunit protein eL40|Methanosarcina acetivorans (strain

Query: 2 RCDRCGYNT 10
RC +CGY T
Sbjct: 30 RCRKCGYGT 38


>sp|Y4320_HALS3|UPF0148 protein OE_4320R|Halobacterium salinarum (strain ATCC 29341

Query: 3 CDRCG 7
CDRCG
Sbjct: 49 CDRCG 53


>sp|Y2366_HALSA|UPF0148 protein VNG_2366C|Halobacterium salinarum (strain ATCC 700922

Query: 3 CDRCG 7
CDRCG
Sbjct: 49 CDRCG 53


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 2 RCDRCG 7
RC RCG
Sbjct: 372 RCPRCG 377


>sp|TIAS_ACIS3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Acidilobus saccharovorans

Query: 2 RCDRCG 7
RC RCG
Sbjct: 357 RCPRCG 362


Query: 2 RCDRCG 7
RC RCG
Sbjct: 375 RCPRCG 380


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 RCDRCG 7
RC RCG
Sbjct: 760 RCPRCG 765


Query: 2 RCDRCGY 8
RC CGY
Sbjct: 746 RCLDCGY 752


>sp|HYPA_META3|HYDROGENASE maturation factor HypA|Methanococcus aeolicus (strain ATCC

Query: 1 IRCDRCGY 8
I C+ CGY
Sbjct: 75 IACNNCGY 82


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 RCDRCG 7
RC RCG
Sbjct: 651 RCPRCG 656


Query: 2 RCDRCG 7
+C RCG
Sbjct: 1219 KCTRCG 1224


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 IRCDRCG 7
+RC +CG
Sbjct: 1035 VRCTKCG 1041


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 RCDRCGY 8
RC CGY
Sbjct: 142 RCPYCGY 148


>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCDRCG 7
RC++CG
Sbjct: 118 RCNKCG 123


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCDRCGY 8
RC CGY
Sbjct: 583 RCRDCGY 589


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 2 RCDRCG 7
RC++CG
Sbjct: 322 RCEKCG 327


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IRCDRCGY 8
++C RC Y
Sbjct: 122 VKCTRCDY 129


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCDRCG 7
+CD+CG
Sbjct: 149 KCDKCG 154


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 RCDRCGYNT 10
+C RCG T
Sbjct: 655 KCPRCGTET 663


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IRCDRCG 7
++C++CG
Sbjct: 444 VKCNKCG 450


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 IRCDRCG 7
++C++CG
Sbjct: 507 VKCNKCG 513


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 IRCDRCG 7
++C++CG
Sbjct: 507 VKCNKCG 513


>sp|PYRI_METVS|ASPARTATE carbamoyltransferase regulatory chain|Methanococcus vannielii

Query: 1 IRCDRC 6
IRCD C
Sbjct: 132 IRCDYC 137


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 1 IRCDRCG 7
++CD CG
Sbjct: 121 LKCDACG 127


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IRCDRC 6
+ CDRC
Sbjct: 758 VHCDRC 763


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RCDRCG 7
+C+RCG
Sbjct: 155 QCERCG 160


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDRCG 7
CD+CG
Sbjct: 437 CDKCG 441


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IRCDRCG 7
IRC CG
Sbjct: 129 IRCPECG 135


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IRCDRCG 7
IRC CG
Sbjct: 129 IRCPECG 135


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IRCDRCG 7
IRC CG
Sbjct: 127 IRCPECG 133


>sp|RL37_CALMQ|LARGE ribosomal subunit protein eL37|Caldivirga maquilingensis (strain

Query: 1 IRCDRCGYNT 10
IRC RCG ++
Sbjct: 18 IRCPRCGRHS 27


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 IRCDRCGY 8
++C+ CG+
Sbjct: 331 VKCNHCGW 338


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RCDRCG 7
+CD CG
Sbjct: 148 KCDECG 153


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RCDRCG 7
RC++CG
Sbjct: 172 RCNQCG 177


>sp|Y653_METJA|UNCHARACTERIZED protein MJ0653|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDRCGY 8
C+ CGY
Sbjct: 164 CENCGY 169


>sp|RL37_THEVO|LARGE ribosomal subunit protein eL37|Thermoplasma volcanium (strain

Query: 1 IRCDRCGYNT 10
I C RCG++T
Sbjct: 18 ITCRRCGHHT 27


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IRCDRCGY 8
++C+ CG+
Sbjct: 331 VKCNNCGW 338


>sp|RL37_NITMS|LARGE ribosomal subunit protein eL37|Nitrosopumilus maritimus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG N+
Sbjct: 18 IRCRRCGKNS 27


>sp|Y1230_METJA|UNCHARACTERIZED protein MJ1230|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCGYN 9
I C +CGY+
Sbjct: 45 ITCKKCGYS 53


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 IRCDRCG 7
++CD CG
Sbjct: 122 LKCDACG 128


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 IRCDRCG 7
+RC+ CG
Sbjct: 58 LRCETCG 64


>sp|RL37_IGNH4|LARGE ribosomal subunit protein eL37|Ignicoccus hospitalis (strain

Query: 1 IRCDRCGYNT 10
IRC RCG ++
Sbjct: 18 IRCRRCGRHS 27


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 IRCDRCGY 8
I C +CG+
Sbjct: 249 IHCPKCGF 256


>sp|RL37_ARCFU|LARGE ribosomal subunit protein eL37|Archaeoglobus fulgidus (strain

Query: 1 IRCDRCGYNT 10
IRC RCG ++
Sbjct: 18 IRCRRCGRHS 27


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 3 CDRCGY 8
C +CGY
Sbjct: 244 CSKCGY 249


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 4 DRCGYN 9
++CGYN
Sbjct: 297 EKCGYN 302


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DRCGYN 9
++CGYN
Sbjct: 299 EKCGYN 304


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 RCDRCG 7
+CD CG
Sbjct: 72 KCDSCG 77


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5

Query: 2 RCDRCG 7
+CD CG
Sbjct: 72 KCDSCG 77


>sp|RL37_DESA1|LARGE ribosomal subunit protein eL37|Desulfurococcus amylolyticus

Query: 1 IRCDRCGYNT 10
IRC RCG ++
Sbjct: 18 IRCRRCGRHS 27


>sp|KAD_HALMA|ADENYLATE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CDRCGYN 9
CD CG N
Sbjct: 129 CDDCGTN 135


Query: 3 CDRCG 7
CD CG
Sbjct: 149 CDECG 153


>sp|RTCA_METTP|RNA 3'-terminal phosphate cyclase|Methanothrix thermoacetophila (strain

Query: 2 RCDRCGY 8
RC+R GY
Sbjct: 150 RCERRGY 156


>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 3 CDRCG 7
C+RCG
Sbjct: 661 CERCG 665


Query: 1 IRCDRCGYNT 10
IRC CG T
Sbjct: 634 IRCWACGERT 643


>sp|TFS1_SACS2|TRANSCRIPTION factor S1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RCDRCGY 8
RC +CGY
Sbjct: 26 RCTKCGY 32


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RCDRCGY 8
RC+ CG+
Sbjct: 194 RCEICGF 200


>sp|RL37A_PYRAE|LARGE ribosomal subunit protein eL43|Pyrobaculum aerophilum (strain

Query: 2 RCDRCGY 8
RC +CG+
Sbjct: 58 RCPKCGF 64


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 3 CDRCGY 8
C RCG+
Sbjct: 251 CPRCGF 256


>sp|RL37_HYPBU|LARGE ribosomal subunit protein eL37|Hyperthermus butylicus (strain DSM

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCPRCG 24


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 IRCDRCG 7
++CD CG
Sbjct: 661 LKCDVCG 667


>sp|TRM1_METKA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanopyrus kandleri

Query: 1 IRCDRCGYNT 10
+ C CGY +
Sbjct: 241 LHCRECGYTS 250


>sp|SYG_METVS|GLYCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IRCDRCG 7
I+C +CG
Sbjct: 126 IKCPKCG 132


>sp|SYG_METM7|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 IRCDRCG 7
I+C +CG
Sbjct: 126 IKCPKCG 132


>sp|SYG_METM6|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 IRCDRCG 7
I+C +CG
Sbjct: 126 IKCPKCG 132


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 IRCDRCG 7
I+C +CG
Sbjct: 126 IKCPKCG 132


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 3 CDRCGYNT 10
C+RCG T
Sbjct: 297 CERCGSKT 304


Query: 1 IRCDRCG 7
+ CD+CG
Sbjct: 1 MECDKCG 7


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CDRCG 7
C+RCG
Sbjct: 1696 CNRCG 1700


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 IRCDRCGY 8
I+C+ C Y
Sbjct: 331 IKCNNCDY 338


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RCDRCGY 8
+C CGY
Sbjct: 72 KCRNCGY 78


>sp|TIAS_METMA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina mazei (strain

Query: 2 RCDRCGYNT 10
RC +CG ++
Sbjct: 375 RCKKCGTDS 383


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 RCDRCG 7
+CD CG
Sbjct: 156 QCDECG 161


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RCDRCG 7
+CD CG
Sbjct: 155 QCDECG 160


>sp|Y981_METJA|UNCHARACTERIZED protein MJ0981|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCGY 8
++C+ CG+
Sbjct: 9 LKCENCGF 16


Query: 1 IRCDRCG 7
+RC CG
Sbjct: 35 VRCPNCG 41


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RCDRCG 7
RC+ CG
Sbjct: 172 RCNECG 177


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RCDRCG 7
RC+ CG
Sbjct: 168 RCNECG 173


>sp|RL37_THEGJ|LARGE ribosomal subunit protein eL37|Thermococcus gammatolerans (strain

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7

Query: 2 RCDRCG 7
+CD CG
Sbjct: 72 KCDACG 77


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6

Query: 2 RCDRCG 7
+CD CG
Sbjct: 72 KCDACG 77


>sp|RL37_THEKO|LARGE ribosomal subunit protein eL37|Thermococcus kodakarensis (strain

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|RL37_METJA|LARGE ribosomal subunit protein eL37|Methanocaldococcus jannaschii

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 CDRCGY 8
C RCG+
Sbjct: 75 CKRCGH 80


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 RCDRCG 7
+CD CG
Sbjct: 157 QCDNCG 162


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RCDRCG 7
+CD CG
Sbjct: 157 QCDNCG 162


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 RCDRCG 7
+CD CG
Sbjct: 155 QCDNCG 160


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 RCDRCG 7
+CD CG
Sbjct: 155 QCDNCG 160


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RCDRCG 7
+CD CG
Sbjct: 155 QCDNCG 160


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 RCDRCG 7
+CD CG
Sbjct: 155 QCDNCG 160


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 RCDRCG 7
+CD CG
Sbjct: 155 QCDNCG 160


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 73 CDQCCYCT 80


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 73 CDQCCYCT 80


>sp|RL37_PYRHO|LARGE ribosomal subunit protein eL37|Pyrococcus horikoshii (strain ATCC

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|RL37_PYRAB|LARGE ribosomal subunit protein eL37|Pyrococcus abyssi (strain GE5 /

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 IRCDRCGYNT 10
++C+ CG T
Sbjct: 128 LKCEACGAET 137


>sp|RL37_PYRFU|LARGE ribosomal subunit protein eL37|Pyrococcus furiosus (strain ATCC

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IRCDRCG 7
+RC CG
Sbjct: 90 VRCTSCG 96


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 69 CDQCCYCT 76


Query: 1 IRCDRCGY 8
I C RC Y
Sbjct: 452 IACGRCEY 459


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 IRCDRCGY 8
++C CGY
Sbjct: 328 LKCRVCGY 335


>sp|SYA_KORCO|ALANINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RCDRCG 7
RC +CG
Sbjct: 18 RCPKCG 23


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RCDRCG 7
RC +CG
Sbjct: 22 RCPKCG 27


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 RCDRCG 7
+C RCG
Sbjct: 132 KCPRCG 137


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 RCDRCG 7
RC +CG
Sbjct: 355 RCPKCG 360


>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 2 RCDRCG 7
RC +CG
Sbjct: 323 RCPKCG 328


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RCDRCG 7
RC +CG
Sbjct: 149 RCPKCG 154


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 2 RCDRCG 7
+C RCG
Sbjct: 149 KCPRCG 154


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RCDRCG 7
RC +CG
Sbjct: 153 RCPKCG 158


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 72 CDQCCYCT 79


>sp|RL37_STAMF|LARGE ribosomal subunit protein eL37|Staphylothermus marinus (strain

Query: 1 IRCDRCG 7
IRC RCG
Sbjct: 18 IRCRRCG 24


>sp|PYRI_STAMF|ASPARTATE carbamoyltransferase regulatory chain|Staphylothermus marinus

Query: 1 IRCDRCGY 8
+ C CGY
Sbjct: 144 LECQYCGY 151


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 72 CDQCCYCT 79


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 73 CDQCCYCT 80


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 2 RCDRCGY 8
+C CGY
Sbjct: 329 KCSVCGY 335


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 RCDRCGY 8
+C CGY
Sbjct: 329 KCSVCGY 335


>sp|NPD_HALMA|NAD-DEPENDENT protein deacetylase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IRCDRCGY 8
+ CD CG+
Sbjct: 138 VVCDDCGH 145


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 RCDRCG 7
+C RCG
Sbjct: 1169 KCPRCG 1174


>sp|TRM1_METAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina acetivorans

Query: 1 IRCDRCGY 8
I C +CG+
Sbjct: 249 IYCPKCGF 256


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 2 RCDRCG 7
RC +CG
Sbjct: 375 RCKKCG 380


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 73 CDQCCYCT 80


>sp|RL40_METAR|LARGE ribosomal subunit protein eL40|Methanocella arvoryzae (strain DSM

Query: 2 RCDRCGYN 9
RC +CGY
Sbjct: 30 RCRKCGYE 37


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 RCDRCG 7
RC +CG
Sbjct: 155 RCPKCG 160


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IRCDRCG 7
++C++CG
Sbjct: 152 VKCEKCG 158


Query: 3 CDRCGYNT 10
C CGY T
Sbjct: 134 CPACGYET 141


>sp|RS14Z_NANEQ|SMALL ribosomal subunit protein uS14|Nanoarchaeum equitans (strain

Query: 2 RCDRCG 7
RC+RCG
Sbjct: 32 RCERCG 37


>sp|RPO12_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfurisphaera tokodaii (strain DSM

Query: 1 IRCDRCGYN 9
+RC CGY
Sbjct: 24 VRCPYCGYK 32


>sp|Y954_METVS|UNCHARACTERIZED solute-binding protein Mevan_0954|Methanococcus vannielii (strain

Query: 4 DRCGYNT 10
D CGY T
Sbjct: 142 DPCGYRT 148


>sp|Y925_METM7|UNCHARACTERIZED solute-binding protein MmarC7_0925|Methanococcus maripaludis

Query: 4 DRCGYNT 10
D CGY T
Sbjct: 156 DPCGYRT 162


>sp|Y1756_METM5|UNCHARACTERIZED solute-binding protein MmarC5_1756|Methanococcus maripaludis

Query: 4 DRCGYNT 10
D CGY T
Sbjct: 159 DPCGYRT 165


>sp|WTPA_METJA|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DRCGYNT 10
D CGY T
Sbjct: 158 DPCGYRT 164


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 IRCDRCG 7
+ C RCG
Sbjct: 652 LSCSRCG 658


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RCDRCG 7
+C++CG
Sbjct: 518 KCEKCG 523


>sp|IF2B_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 IRCDRCGYNT 10
++C+ CG T
Sbjct: 126 LKCEACGAET 135


>sp|IF2B_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IRCDRCGYNT 10
++C+ CG T
Sbjct: 126 LKCEACGAET 135


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 RCDRCGYNT 10
RC +CG T
Sbjct: 643 RCPKCGTVT 651


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 73 CDQCCYCT 80


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 2 RCDRCG 7
+C RCG
Sbjct: 382 KCTRCG 387


>sp|KPTA_METKA|PROBABLE RNA 2'-phosphotransferase|Methanopyrus kandleri (strain AV19 /

Query: 3 CDRCGYNT 10
C+RCG T
Sbjct: 19 CERCGRRT 26


>sp|IF2B_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IRCDRCGYNT 10
++C+ CG T
Sbjct: 126 LKCEACGAET 135


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 IRCDRCG 7
+ C RCG
Sbjct: 500 LECGRCG 506


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RCDRCGYNT 10
+C++CG T
Sbjct: 464 QCEQCGERT 472


>sp|RL40_METBU|LARGE ribosomal subunit protein eL40|Methanococcoides burtonii (strain

Query: 2 RCDRCGY 8
RC +CGY
Sbjct: 30 RCRKCGY 36


>sp|IF2B_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain DSM

Query: 1 IRCDRCGYNT 10
++C+ CG T
Sbjct: 128 LKCEACGAET 137


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 CDRCGYNT 10
CD+C Y T
Sbjct: 72 CDQCCYCT 79


>sp|IF2B_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 IRCDRCG 7
+RC CG
Sbjct: 113 VRCPTCG 119


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 IRCDRCG 7
+RC CG
Sbjct: 128 LRCPECG 134


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 3 CDRCG 7
CD CG
Sbjct: 51 CDNCG 55


>sp|RL44E_DESA1|LARGE ribosomal subunit protein eL42|Desulfurococcus amylolyticus

Query: 1 IRCDRCGY 8
++C +CGY
Sbjct: 76 LKCSKCGY 83


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 3 CDRCGYN 9
CD CG N
Sbjct: 70 CDLCGEN 76


>sp|Y042_METJA|UNCHARACTERIZED protein MJ0042|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCG 7
++C +CG
Sbjct: 26 VKCPKCG 32


>sp|RS27A_IGNH4|SMALL ribosomal subunit protein eS31|Ignicoccus hospitalis (strain

Query: 2 RCDRCG 7
RC RCG
Sbjct: 28 RCPRCG 33


>sp|IF2B_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 1 IRCDRCGYNT 10
++C+ CG T
Sbjct: 128 LKCEACGAET 137


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 1 IRCDRCGY 8
++C+ C Y
Sbjct: 331 VKCNNCDY 338


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 1 IRCDRCGY 8
++C+ C Y
Sbjct: 331 VKCNNCDY 338


>sp|Y1448_METMA|UPF0251 protein MM_1448|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CDRCGYNT 10
C CGY T
Sbjct: 134 CTACGYET 141


Query: 1 IRCDRCG 7
++C++CG
Sbjct: 152 VKCEKCG 158


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RS27A_METTP|SMALL ribosomal subunit protein eS31|Methanothrix thermoacetophila

Query: 1 IRCDRCGYN 9
+ C RCGY
Sbjct: 37 MSCGRCGYT 45


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 2 RCDRCG 7
RC+ CG
Sbjct: 747 RCEACG 752


>sp|PYRI_NATPD|ASPARTATE carbamoyltransferase regulatory chain|Natronomonas pharaonis

Query: 1 IRCDRCG 7
+RC CG
Sbjct: 133 VRCSYCG 139


>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC

Query: 1 IRCDRCGYN 9
+ C+ CG++
Sbjct: 71 VECEDCGFH 79


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 2 RCDRCG 7
RC +CG
Sbjct: 146 RCPKCG 151


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRCDRCG 7
I C+ CG
Sbjct: 85 IECENCG 91


>sp|RL37_METKA|LARGE ribosomal subunit protein eL37|Methanopyrus kandleri (strain AV19

Query: 1 IRCDRCG 7
+RC RCG
Sbjct: 18 VRCRRCG 24


>sp|RL37_METTP|LARGE ribosomal subunit protein eL37|Methanothrix thermoacetophila

Query: 1 IRCDRCG 7
+RC RCG
Sbjct: 17 VRCRRCG 23


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 DRCGYNT 10
D CGY T
Sbjct: 18 DACGYPT 24


>sp|Z143_THEKO|ZINC-FINGER protein TK0143|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RCDRCG 7
RC RCG
Sbjct: 19 RCPRCG 24


>sp|PYRI_HALWD|ASPARTATE carbamoyltransferase regulatory chain|Haloquadratum walsbyi (strain

Query: 1 IRCDRCG 7
++CD CG
Sbjct: 157 LQCDYCG 163


>sp|RL40_HALLT|LARGE ribosomal subunit protein eL40|Halorubrum lacusprofundi (strain

Query: 2 RCDRCGY 8
RC +CGY
Sbjct: 30 RCRKCGY 36


>sp|Y2201_ARCFU|UNCHARACTERIZED protein AF_2201|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IRCDRCGYNT 10
+ C CG+ +
Sbjct: 90 VNCQACGFES 99


>sp|TFS_METJA|TRANSCRIPTION factor S|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IRCDRCGYN 9
I C +CG+N
Sbjct: 67 IECPKCGHN 75


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 1 IRCDRCG 7
+RC+ CG
Sbjct: 121 LRCEACG 127


>sp|PUS10_METTP|TRNA pseudouridine synthase Pus10|Methanothrix thermoacetophila (strain

Query: 3 CDRCG 7
C+RCG
Sbjct: 229 CERCG 233


>sp|RPO12_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus shibatae (strain ATCC

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus solfataricus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 IRCDRCGY 8
+RC CGY
Sbjct: 24 VRCPYCGY 31


>sp|RPO12_METKA|DNA-DIRECTED RNA polymerase subunit Rpo12|Methanopyrus kandleri (strain AV19 /

Query: 1 IRCDRCGY 8
IRC CG+
Sbjct: 27 IRCTHCGF 34


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain ATCC

Query: 3 CDRCG 7
CD CG
Sbjct: 200 CDHCG 204


>sp|RNP4_PICTO|RIBONUCLEASE P protein component 4|Picrophilus torridus (strain ATCC 700027

Query: 1 IRCDRCG 7
I CD CG
Sbjct: 69 IHCDHCG 75


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 2 RCDRCG 7
+CD+CG
Sbjct: 74 KCDKCG 79




45|Sequence|221|230|CGYNTNRYDH

>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CGYNTNRY 8
CGYN N Y
Sbjct: 457 CGYNINEY 464


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 GYNTNRYD 9
GYN NR+D
Sbjct: 250 GYNQNRFD 257


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 GYNTNRYD 9
G+++NRYD
Sbjct: 188 GFDSNRYD 195


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 2 GYNTNRYD 9
G+N NR+D
Sbjct: 724 GFNANRFD 731


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 1 CGYNTNRYD 9
CG+N + YD
Sbjct: 34 CGFNVHWYD 42


>sp|COBD_PYRHO|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus horikoshii (strain

Query: 2 GYNTNRYDH 10
GY T+RY++
Sbjct: 173 GYRTSRYEY 181


>sp|TRM56_HYPBU|TRNA (cytidine(56)-2'-O)-methyltransferase|Hyperthermus butylicus

Query: 1 CGYNTNRY 8
CG N+ RY
Sbjct: 73 CGVNSRRY 80


>sp|RS10_KORCO|SMALL ribosomal subunit protein uS10|Korarchaeum cryptofilum (strain

Query: 2 GYNTNRYD 9
G TNRYD
Sbjct: 56 GEGTNRYD 63


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 2 GYNTNRYDH 10
GYNT DH
Sbjct: 173 GYNTRVADH 181


>sp|CBIN_METVS|COBALT transport protein CbiN|Methanococcus vannielii (strain ATCC 35089

Query: 2 GYNTNRYD 9
GYN +YD
Sbjct: 87 GYNKAKYD 94


>sp|CBIN_METMP|COBALT transport protein CbiN|Methanococcus maripaludis (strain DSM

Query: 2 GYNTNRYD 9
GYN +YD
Sbjct: 87 GYNKAKYD 94


>sp|CBIN_METM7|COBALT transport protein CbiN|Methanococcus maripaludis (strain C7 /

Query: 2 GYNTNRYD 9
GYN +YD
Sbjct: 87 GYNKAKYD 94


>sp|CBIN_METM6|COBALT transport protein CbiN|Methanococcus maripaludis (strain C6 /

Query: 2 GYNTNRYD 9
GYN +YD
Sbjct: 87 GYNKAKYD 94


>sp|KCY_METTH|CYTIDYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 NTNRYD 9
NTNR+D
Sbjct: 152 NTNRFD 157


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 2 GYNTNRYD 9
G+N +R+D
Sbjct: 183 GFNADRFD 190


>sp|CCA_THEKO|CCA-ADDING enzyme|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GYNTNRY 8
G+NT RY
Sbjct: 337 GWNTGRY 343


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 GYNTNRYD 9
G+N+ R+D
Sbjct: 177 GFNSERFD 184


>sp|IF2P_METLZ|PROBABLE translation initiation factor IF-2|Methanocorpusculum labreanum

Query: 2 GYNTNRYD 9
G+N+ R+D
Sbjct: 175 GFNSERFD 182


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 GYNTNRYD 9
G+NT+ YD
Sbjct: 455 GFNTDIYD 462


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GYNTNR 7
GY+TNR
Sbjct: 422 GYDTNR 427


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GYNTNRYDH 10
G NT RY++
Sbjct: 80 GINTTRYNN 88


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GYNTN 6
GYNTN
Sbjct: 28 GYNTN 32


>sp|RS10_THEVO|SMALL ribosomal subunit protein uS10|Thermoplasma volcanium (strain

Query: 2 GYNTNRYDH 10
G TN +DH
Sbjct: 57 GEGTNTWDH 65


>sp|RS10_THEAC|SMALL ribosomal subunit protein uS10|Thermoplasma acidophilum (strain

Query: 2 GYNTNRYDH 10
G TN +DH
Sbjct: 57 GEGTNTWDH 65


>sp|NIFD_METTM|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GYNTNRY 8
GY T RY
Sbjct: 78 GYGTKRY 84


>sp|NIFD_METTH|NITROGENASE molybdenum-iron protein alpha chain|Methanothermobacter

Query: 2 GYNTNRY 8
GY T RY
Sbjct: 78 GYGTKRY 84




46|Sequence|226|235|NRYDHYTAHL

>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 NRYDHYTAH 9
NRYD Y A+
Sbjct: 852 NRYDEYNAN 860


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 324 NRYKELTEHL 333


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 324 NRYKELTEHL 333


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 324 NRYKELTEHL 333


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 324 NRYKELTEHL 333


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 324 NRYKELTEHL 333


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 658 NRYKELTEHL 667


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NRYDHYTAHL 10
NRY T HL
Sbjct: 319 NRYKELTEHL 328


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 4 DHYTAHL 10
DH+ AHL
Sbjct: 463 DHFEAHL 469


>sp|PDXT_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Picrophilus torridus (strain

Query: 3 YDHYTA 8
Y+HYTA
Sbjct: 13 YEHYTA 18


>sp|Y873_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 NRYDHYTAHL 10
NRYD HL
Sbjct: 280 NRYDVVVGHL 289


>sp|RS10_KORCO|SMALL ribosomal subunit protein uS10|Korarchaeum cryptofilum (strain

Query: 1 NRYDHY 6
NRYD Y
Sbjct: 60 NRYDKY 65


>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 HYTAHL 10
HYT HL
Sbjct: 108 HYTTHL 113


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 HYTAHL 10
HYTA+L
Sbjct: 110 HYTAYL 115


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 NRYDHYTA 8
NRY H T+
Sbjct: 50 NRYPHITS 57


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 NRYDHYTA 8
NRY H T+
Sbjct: 50 NRYPHITS 57


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 NRYDHYTA 8
NRY H T+
Sbjct: 50 NRYPHITS 57


>sp|RS2_METVS|SMALL ribosomal subunit protein uS2|Methanococcus vannielii (strain ATCC

Query: 4 DHYTAHL 10
+H TAHL
Sbjct: 145 EHLTAHL 151


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HYTAHL 10
HY AHL
Sbjct: 118 HYAAHL 123


>sp|Y1629_METJA|UPF0282 protein MJ1629|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YDHYT 7
YDHYT
Sbjct: 76 YDHYT 80


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 1 NRYDHYTAHL 10
N DH TAH+
Sbjct: 142 NLGDHATAHM 151




47|Sequence|231|240|YTAHLKHHTR

>sp|COFG_METTP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TAHLKHHTR 10
TAHLK H R
Sbjct: 135 TAHLKIHER 143


>sp|Y697_METVS|MEMO1 family protein Mevan_0697|Methanococcus vannielii (strain ATCC

Query: 2 TAHLKHHT 9
TAHLK H+
Sbjct: 130 TAHLKEHS 137


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YTAHLKHHTR 10
YT +LK HT+
Sbjct: 185 YTRNLKEHTK 194


>sp|PRIL_HALMA|DNA primase large subunit PriL|Haloarcula marismortui (strain ATCC

Query: 4 HLKHHTR 10
HL+HH+R
Sbjct: 247 HLEHHSR 253


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 AHLKHHT 9
AH +HHT
Sbjct: 595 AHARHHT 601


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HLKHHT 9
H++HHT
Sbjct: 611 HMRHHT 616


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 HLKHHT 9
H++HHT
Sbjct: 609 HMRHHT 614


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HLKHHT 9
H++HHT
Sbjct: 609 HMRHHT 614


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 4 HLKHHT 9
H++HHT
Sbjct: 609 HMRHHT 614


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 AHLKHHT 9
AH +HHT
Sbjct: 606 AHARHHT 612


>sp|HTPX_THEVO|PROTEASE HtpX homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 AHLKHH 8
HLKHH
Sbjct: 152 GHLKHH 157


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 3 AHLKHH 8
HLKHH
Sbjct: 147 GHLKHH 152


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 4 HLKHHTR 10
HL HH R
Sbjct: 250 HLPHHAR 256


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 4 HLKHHTR 10
HL HH R
Sbjct: 250 HLPHHAR 256


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 AHLKHH 8
AHL HH
Sbjct: 176 AHLLHH 181


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 3 AHLKHH 8
AHL HH
Sbjct: 176 AHLLHH 181




48|Sequence|236|245|KHHTRAGDNE

>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 HHTRA 6
HHTRA
Sbjct: 66 HHTRA 70




49|Sequence|241|250|AGDNERVYKC

>sp|GGPS_SACS2|GERANYLGERANYL diphosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 AGDNERVYK 9
GD ER YK
Sbjct: 60 GGDRERAYK 68


>sp|FLAB2_METVO|FLAGELLIN B2|Methanococcus voltae

Query: 2 GDNERVYK 9
G N+RVYK
Sbjct: 104 GSNKRVYK 111


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 3 DNERVYKC 10
DNE YKC
Sbjct: 170 DNEISYKC 177


>sp|PDAD_METBU|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GDNERVYKC 10
G+ ERVYK
Sbjct: 139 GERERVYKA 147


>sp|PDXS_PYRAE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum aerophilum (strain

Query: 1 AGDNERV 7
AGD ERV
Sbjct: 216 AGDEERV 222


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 NERVYKC 10
NER++ C
Sbjct: 403 NERIFDC 409


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii

Query: 2 GDNERVYKC 10
GD ++Y+C
Sbjct: 43 GDKYKLYRC 51


>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 4 NERVYKC 10
NE VY+C
Sbjct: 37 NELVYEC 43


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GDNERVY 8
GD ER+Y
Sbjct: 252 GDTERLY 258


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 AGDNERVY 8
AG+N R+Y
Sbjct: 591 AGENIRIY 598


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDNERVY 8
GD ER+Y
Sbjct: 260 GDRERLY 266




50|Sequence|246|255|RVYKCIICTY

>sp|DFX_ARCFU|DESULFOFERRODOXIN homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVYKCIIC 8
+VYKC++C
Sbjct: 6 QVYKCMVC 13


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VYKCIIC 8
VYKC IC
Sbjct: 34 VYKCPIC 40


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YKCIICTY 10
Y C CTY
Sbjct: 55 YTCTYCTY 62


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 YKCIICTY 10
Y C CTY
Sbjct: 55 YTCTYCTY 62


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YKCIICTY 10
Y C CTY
Sbjct: 52 YTCTYCTY 59


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 YKCIICT 9
YKC IC+
Sbjct: 459 YKCPICS 465


>sp|PUS10_ACIS3|TRNA pseudouridine synthase Pus10|Acidilobus saccharovorans (strain DSM

Query: 1 RVYKCII 7
RVY+C++
Sbjct: 299 RVYRCVL 305


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 VYKCIICT 9
VY+C +C+
Sbjct: 4 VYRCRVCS 11


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 VYKCIIC 8
VY+C IC
Sbjct: 34 VYRCPIC 40


>sp|Y2022_ARCFU|UNCHARACTERIZED protein AF_2022|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YKCIICTY 10
Y+C+ C Y
Sbjct: 97 YRCLFCLY 104


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 YKCIICTY 10
Y C++C +
Sbjct: 263 YTCVLCKF 270


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 2 VYKCIIC 8
VY+C IC
Sbjct: 34 VYRCPIC 40


>sp|TFS4_SACS2|TRANSCRIPTION factor S4|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RVYKCIICTY 10
R+Y+C+ C +
Sbjct: 79 RLYRCMTCNF 88


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 2 VYKCIIC 8
+Y+CI C
Sbjct: 61 IYRCICC 67


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 VYKCIIC 8
+Y+C IC
Sbjct: 34 IYRCPIC 40


>sp|Y1642_METJA|UNCHARACTERIZED protein MJ1642|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RVYKCIICT 9
R+Y CI C+
Sbjct: 75 RIYDCISCS 83


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 KCIIC 8
KCI+C
Sbjct: 445 KCIVC 449


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 KCIIC 8
KC+IC
Sbjct: 463 KCVIC 467


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 KCIIC 8
KCI+C
Sbjct: 449 KCIVC 453


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 2 VYKCIICTY 10
V+KC C Y
Sbjct: 70 VFKCRNCNY 78


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 3 YKCIIC 8
YKC +C
Sbjct: 327 YKCPVC 332


>sp|Y1178_METTH|UPF0251 protein MTH_1178|Methanothermobacter thermautotrophicus (strain

Query: 1 RVYKCIICTY 10
RV KCI C Y
Sbjct: 154 RVCKCIECGY 163


Query: 1 RVYKCIICTY 10
R YKC+ C +
Sbjct: 97 RRYKCMDCQF 106


>sp|NADC_METJA|PROBABLE nicotinate-nucleotide pyrophosphorylase

Query: 4 KCIIC 8
KCI+C
Sbjct: 44 KCIVC 48


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YKCIICTY 10
YKC C Y
Sbjct: 19 YKCPYCNY 26


>sp|RUBR_METTH|PROBABLE rubredoxin|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RVYKCIICTY 10
+ YKC +C Y
Sbjct: 12 KRYKCRVCGY 21


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VYKCIICTY 10
VYKC C Y
Sbjct: 21 VYKCSKCGY 29


>sp|Y939_METJA|UNCHARACTERIZED protein MJ0939|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YKCIICTY 10
Y+CI C Y
Sbjct: 15 YECINCAY 22




51|Sequence|251|260|IICTYTTVSE

>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 5 YTTVSE 10
YTTVSE
Sbjct: 11 YTTVSE 16


>sp|CBID_METM5|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 IICTYTTVS 9
I+C YT+++
Sbjct: 288 ILCAYTSLA 296




52|Sequence|256|265|TTVSEYHWRK

>sp|LYSY_CALMQ|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 TVSEYHWRK 10
TV +YHW +
Sbjct: 192 TVLDYHWHR 200


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 3 VSEYHWR 9
+SEY WR
Sbjct: 652 LSEYEWR 658


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TVSEYHWRK 10
T+ EY WR+
Sbjct: 104 TLGEYSWRQ 112


>sp|TRM56_METJA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocaldococcus

Query: 3 VSEYHWRK 10
V E HWRK
Sbjct: 61 VVEKHWRK 68


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 VSEYHWRK 10
+SEYH +K
Sbjct: 365 ISEYHSKK 372


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 VSEYHWRK 10
+SEYH +K
Sbjct: 365 ISEYHSKK 372


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 VSEYHWRK 10
+SEYH +K
Sbjct: 365 ISEYHSKK 372


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 VSEYHWRK 10
+SEYH +K
Sbjct: 365 ISEYHSKK 372


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 3 VSEYHWRK 10
+SEYH +K
Sbjct: 365 ISEYHSKK 372


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 3 VSEYHWR 9
VSEYH R
Sbjct: 213 VSEYHLR 219


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 TTVSEYHWR 9
TT+ + HW+
Sbjct: 166 TTILDSHWK 174


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 2 TVSEYHWR 9
T E HWR
Sbjct: 109 TYEEKHWR 116


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 1 TTVSEYHWRK 10
TTVS+ W++
Sbjct: 395 TTVSQDTWKR 404


>sp|TFE_ARCFU|TRANSCRIPTION factor E|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EYHWR 9
EY+WR
Sbjct: 80 EYYWR 84


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 3 VSEYHWRK 10
V EY WR+
Sbjct: 226 VGEYGWRE 233


>sp|PIMT_PYRAB|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 VSEYHWRK 10
+ EY WR+
Sbjct: 209 IGEYGWRE 216




53|Sequence|261|270|YHWRKHLRNH

>sp|TRM56_METJA|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocaldococcus

Query: 2 HWRKHLR 8
HWRK++R
Sbjct: 65 HWRKYIR 71


>sp|AROC_METTH|CHORISMATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YHWRKHLRNH 10
Y WR RN+
Sbjct: 116 YTWRARFRNY 125


>sp|GGR_THEVO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 RKHLRN 9
RKHLRN
Sbjct: 337 RKHLRN 342


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 RKHLRN 9
RKHLRN
Sbjct: 337 RKHLRN 342


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 4 RKHLRN 9
RKHLRN
Sbjct: 338 RKHLRN 343


>sp|NUSA_METJA|PROBABLE transcription termination protein NusA|Methanocaldococcus

Query: 3 WRKHLRN 9
WRK +RN
Sbjct: 75 WRKFIRN 81


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 1 YHWRKH 6
YHW KH
Sbjct: 106 YHWDKH 111


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WRKHLRN 9
W KHL+N
Sbjct: 464 WMKHLQN 470


>sp|MDH_PYRAB|MALATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 WRKHLRN 9
W KH++N
Sbjct: 264 WSKHVKN 270


>sp|AATE_METST|A-TYPE ATP synthase subunit E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 WRKHLRN 9
+RKHLR+
Sbjct: 193 YRKHLRS 199


>sp|RL3_PYRIL|LARGE ribosomal subunit protein uL3|Pyrobaculum islandicum (strain DSM

Query: 3 WRKHLRNH 10
W KH + H
Sbjct: 231 WHKHRKGH 238


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain DSM

Query: 3 WRKHLRNH 10
W KH + H
Sbjct: 227 WHKHRKGH 234


>sp|IF2A_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 3 WRKHLRNH 10
W KH+R++
Sbjct: 48 WVKHIRSY 55


>sp|IF2A_THEAC|TRANSLATION initiation factor 2 subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 WRKHLRNH 10
W KH+R++
Sbjct: 48 WVKHIRSY 55


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 WRKHLRNH 10
W+K NH
Sbjct: 454 WKKAFENH 461


>sp|NARC_HALMT|PROBABLE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 YHWRKHL 7
+HW HL
Sbjct: 114 HHWAAHL 120


>sp|RL6_NANEQ|LARGE ribosomal subunit protein uL6|Nanoarchaeum equitans (strain

Query: 3 WRKHLRN 9
WR H++N
Sbjct: 70 WRSHIKN 76


>sp|IF2A_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 WRKHLRNH 10
W K++R+H
Sbjct: 50 WVKNIRDH 57


>sp|Y1623_METJA|UNCHARACTERIZED protein MJ1623|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HWRKHLRN 9
+WR+ L+N
Sbjct: 413 NWREELKN 420


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain DSM

Query: 3 WRKHLRNH 10
W KH + H
Sbjct: 227 WHKHRKGH 234


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 3 WRKHLRNH 10
W KH + H
Sbjct: 227 WHKHRKGH 234


>sp|IF2A_METS3|TRANSLATION initiation factor 2 subunit|Methanobrevibacter smithii (strain

Query: 3 WRKHLRNH 10
W K++R+H
Sbjct: 50 WVKNIRDH 57


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 2 HWRKHLRN 9
HWR H N
Sbjct: 19 HWRAHTIN 26


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 3 WRKHLRNH 10
W KH + H
Sbjct: 227 WHKHRKGH 234


>sp|Y1361_METJA|UNCHARACTERIZED protein MJ1361|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHWRKHL 7
Y+W K+L
Sbjct: 68 YYWSKYL 74


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HWRKH 6
HW KH
Sbjct: 479 HWLKH 483


>sp|GLYA_THEKO|SERINE hydroxymethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 HWRKHLRN 9
+WRKH N
Sbjct: 21 NWRKHTIN 28


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HWRKHLRN 9
HW+ ++RN
Sbjct: 208 HWKPNVRN 215




54|Sequence|266|275|HLRNHFPRKV

>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus (strain

Query: 1 HLRNHFPRKV 10
H+ NHFPR++
Sbjct: 132 HVLNHFPREL 141


>sp|UPPP_SACS2|UNDECAPRENYL-DIPHOSPHATASE solfataricus (strain ATCC 35092

Query: 3 RNHFPRK 9
+N+FPRK
Sbjct: 136 KNYFPRK 142


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRNHFPRKV 10
LR HFP V
Sbjct: 140 LRQHFPADV 148


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLRNHFPRK 9
HL+NHF K
Sbjct: 407 HLQNHFSVK 415


>sp|Y1195_METTH|UNCHARACTERIZED protein MTH_1195|Methanothermobacter thermautotrophicus (strain

Query: 1 HLRNHFPRKV 10
HLRN RK+
Sbjct: 163 HLRNDIERKL 172


>sp|Y348_THEGJ|UPF0215 protein TGAM_0348|Thermococcus gammatolerans (strain DSM 15229

Query: 2 LRNHFP 7
LR HFP
Sbjct: 120 LRKHFP 125


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 1 HLRNHFP 7
HL NH P
Sbjct: 27 HLENHGP 33


>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter

Query: 1 HLRNHFP 7
HL NH P
Sbjct: 28 HLENHGP 34


>sp|ARFB_METS3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter smithii (strain

Query: 1 HLRNHFP 7
HL NH P
Sbjct: 27 HLENHGP 33


>sp|ARFB_METRM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanobrevibacter ruminantium

Query: 1 HLRNHFP 7
HL NH P
Sbjct: 27 HLENHGP 33


>sp|GVPD2_HALSA|PROTEIN GvpD2|Halobacterium salinarum (strain ATCC 700922

Query: 5 HFPRKV 10
HFPR++
Sbjct: 18 HFPREI 23


>sp|Y3504_METJA|UNCHARACTERIZED protein MJECL04|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLRNHFPRKV 10
HL+ FP+ +
Sbjct: 163 HLKEFFPKAI 172




55|Sequence|271|280|FPRKVYTCGK

>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 2 PRKVYTCGK 10
PR VYT GK
Sbjct: 358 PRAVYTTGK 366


>sp|MCM_SACS2|MINICHROMOSOME maintenance protein MCM|Saccharolobus solfataricus (strain ATCC

Query: 2 PRKVYTCGK 10
PR VYT GK
Sbjct: 358 PRAVYTTGK 366


>sp|MCM_SACI5|MINICHROMOSOME maintenance protein MCM|Saccharolobus islandicus (strain REY15A)

Query: 2 PRKVYTCGK 10
PR VYT GK
Sbjct: 358 PRAVYTTGK 366


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PRKVYTCGK 10
P+KV+T GK
Sbjct: 325 PQKVFTLGK 333


>sp|SYFB_METLZ|PHENYLALANINE--TRNA ligase beta subunit|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FPRKVYTCG 9
P+K++ CG
Sbjct: 432 LPQKIFACG 440


>sp|Y1003_ARCFU|UNCHARACTERIZED protein AF_1003|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PRKVYTCGK 10
P ++YTC K
Sbjct: 107 PGRIYTCKK 115


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FPRKVYTCG 9
+PR VYT G
Sbjct: 180 YPRFVYTTG 188


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 FPRKVYTCG 9
FPR + CG
Sbjct: 133 FPRSITGCG 141


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 FPRKVYTCGK 10
FP KVY GK
Sbjct: 377 FPDKVYLRGK 386


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 3 RKVYTCG 9
RK+Y CG
Sbjct: 165 RKIYVCG 171


>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain

Query: 1 FPRKVYTCGK 10
FPR + CGK
Sbjct: 85 FPRNLDYCGK 94


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PRKVYTC 8
P KVY C
Sbjct: 42 PSKVYVC 48


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 80 VYTCGE 85


>sp|SPEH_PYRAB|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus abyssi (strain GE5 /

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 80 VYTCGE 85


>sp|ARGDC_SULTO|ARGININE decarboxylase proenzyme|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 93 VYTCGE 98


>sp|ARGDC_STAMF|ARGININE decarboxylase proenzyme|Staphylothermus marinus (strain ATCC

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 89 VYTCGE 94


>sp|ARGDC_SACS2|ARGININE decarboxylase proenzyme|Saccharolobus solfataricus (strain ATCC

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_SACI7|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.G.57.14

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_SACI6|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_SACI4|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_SACI3|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain M.16.27)

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_SACI2|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_SACI1|ARGININE decarboxylase proenzyme|Saccharolobus islandicus (strain Y.N.15.51

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|ARGDC_PYRNV|ARGININE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 91 VYTCGE 96


>sp|ARGDC_PYRIL|ARGININE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 91 VYTCGE 96


>sp|ARGDC_PYRCJ|ARGININE decarboxylase proenzyme|Pyrobaculum calidifontis (strain DSM

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 91 VYTCGE 96


>sp|ARGDC_PYRAR|ARGININE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 98 VYTCGE 103


>sp|ARGDC_PYRAE|ARGININE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 91 VYTCGE 96


>sp|ARGDC_METS5|ARGININE decarboxylase proenzyme|Metallosphaera sedula (strain ATCC 51363

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 93 VYTCGE 98


>sp|ARGDC_IGNH4|ARGININE decarboxylase proenzyme|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 97 VYTCGE 102


>sp|ARGDC_CALMQ|ARGININE decarboxylase proenzyme|Caldivirga maquilingensis (strain ATCC

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 99 VYTCGE 104


>sp|Y308_METJA|UNCHARACTERIZED protein MJ0308|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RKVYTCG 9
R+V+TCG
Sbjct: 226 RQVWTCG 232


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 KVYTCG 9
K+YTCG
Sbjct: 24 KMYTCG 29


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 5 VYTCGK 10
VYTCG+
Sbjct: 80 VYTCGE 85


>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 1 FPRKVYTC 8
FP VY C
Sbjct: 122 FPTAVYDC 129


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 5 VYTCG 9
VYTCG
Sbjct: 183 VYTCG 187


>sp|SYC_HALSA|CYSTEINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 VYTCG 9
VYTCG
Sbjct: 26 VYTCG 30


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 5 VYTCG 9
VYTCG
Sbjct: 80 VYTCG 84


>sp|SPEH_THEKO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus kodakarensis (strain ATCC

Query: 5 VYTCG 9
VYTCG
Sbjct: 83 VYTCG 87


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 5 VYTCG 9
VYTCG
Sbjct: 83 VYTCG 87


>sp|SPEH_PYRAR|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 VYTCG 9
VYTCG
Sbjct: 88 VYTCG 92


>sp|ARGDC_SULAC|ARGININE decarboxylase proenzyme|Sulfolobus acidocaldarius (strain ATCC

Query: 5 VYTCG 9
VYTCG
Sbjct: 95 VYTCG 99


>sp|ARGDC_HYPBU|ARGININE decarboxylase proenzyme|Hyperthermus butylicus (strain DSM 5456

Query: 5 VYTCG 9
VYTCG
Sbjct: 98 VYTCG 102


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 KVYTCGK 10
K Y CGK
Sbjct: 657 KCYNCGK 663


>sp|SPEH_PYRNV|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 VYTCG 9
VYTCG
Sbjct: 87 VYTCG 91


>sp|SPEH_PYRAE|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 VYTCG 9
VYTCG
Sbjct: 88 VYTCG 92


>sp|ARGDC_AERPE|ARGININE decarboxylase proenzyme|Aeropyrum pernix (strain ATCC 700893

Query: 5 VYTCGK 10
+YTCG+
Sbjct: 87 IYTCGE 92


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PRKVYTC 8
P KVY C
Sbjct: 404 PAKVYDC 410


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PRKVYTC 8
P KVY C
Sbjct: 404 PAKVYDC 410


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PRKVYTC 8
P KVY C
Sbjct: 404 PAKVYDC 410


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PRKVYTC 8
P KVY C
Sbjct: 404 PAKVYDC 410


>sp|SPEH_PYRIL|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 5 VYTCG 9
VYTCG
Sbjct: 88 VYTCG 92


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KVYTCG 9
KVY CG
Sbjct: 255 KVYACG 260


>sp|SPEH_THEAC|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermoplasma acidophilum (strain ATCC

Query: 5 VYTCG 9
+YTCG
Sbjct: 81 IYTCG 85


>sp|SPEH_PICTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Picrophilus torridus (strain ATCC 700027

Query: 5 VYTCG 9
+YTCG
Sbjct: 81 IYTCG 85


>sp|SPEH_THEVO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 5 VYTCG 9
+YTCG
Sbjct: 81 IYTCG 85


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 4 KVYTCG 9
K+Y CG
Sbjct: 24 KIYVCG 29




56|Sequence|276|285|YTCGKCNYFS

>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 YTCGKCN 7
YTC KCN
Sbjct: 745 YTCPKCN 751


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 YTCGKCN 7
YTC KCN
Sbjct: 748 YTCPKCN 754


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YTCGKCNYFS 10
Y C KC ++S
Sbjct: 128 YRCSKCGFYS 137


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YTCGKCNYFS 10
Y C KC ++S
Sbjct: 128 YRCSKCGFYS 137


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 YTCGKC 6
YTCG+C
Sbjct: 450 YTCGRC 455


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YTCGKCNYF 9
YTC C Y+
Sbjct: 55 YTCTYCTYY 63


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YTCGKCNYF 9
YTC C Y+
Sbjct: 55 YTCTYCTYY 63


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YTCGKCNYF 9
YTC C Y+
Sbjct: 52 YTCTYCTYY 60


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YTCGKCN 7
YTC KC+
Sbjct: 20 YTCSKCD 26


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YTCGKCN 7
Y+C KCN
Sbjct: 746 YSCPKCN 752


>sp|ACDG_METTH|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanothermobacter

Query: 3 CGKCN 7
CGKCN
Sbjct: 17 CGKCN 21


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TCGKC 6
TCGKC
Sbjct: 332 TCGKC 336


>sp|NADA_SULTO|QUINOLINATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YTCGKCNYFS 10
Y C +C Y +
Sbjct: 258 YACARCPYMA 267


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 YTCGKCNY 8
Y C KC Y
Sbjct: 382 YKCPKCGY 389


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 YTCGKCNY 8
Y C KC Y
Sbjct: 389 YKCPKCGY 396


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTCGKCNY 8
Y C CNY
Sbjct: 19 YKCPYCNY 26


>sp|RS27A_THEAC|SMALL ribosomal subunit protein eS31|Thermoplasma acidophilum (strain

Query: 1 YTCGKCNY 8
Y+CG+C Y
Sbjct: 37 YSCGRCGY 44


>sp|RS27A_METJA|SMALL ribosomal subunit protein eS31|Methanocaldococcus jannaschii

Query: 1 YTCGKCNY 8
Y CGKC Y
Sbjct: 43 YACGKCGY 50


>sp|RS27A_METTH|SMALL ribosomal subunit protein eS31|Methanothermobacter

Query: 1 YTCGKCNY 8
Y CGKC Y
Sbjct: 37 YACGKCGY 44


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 3 CGKCNY 8
CG+C Y
Sbjct: 454 CGRCEY 459


>sp|RS27A_SACS2|SMALL ribosomal subunit protein eS31|Saccharolobus solfataricus (strain

Query: 1 YTCGKCNY 8
++CGKC Y
Sbjct: 58 WSCGKCGY 65


>sp|RF1_METST|PEPTIDE chain release factor subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 YTCGKCN 7
YTC CN
Sbjct: 328 YTCPACN 334


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 1 YTCGKCNY 8
YTC + NY
Sbjct: 247 YTCNRFNY 254


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi

Query: 4 GKCNYF 9
GKC YF
Sbjct: 59 GKCRYF 64


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 YTCGKCNY 8
Y C KC Y
Sbjct: 242 YECSKCGY 249


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 2 TCGKC 6
TCGKC
Sbjct: 191 TCGKC 195


>sp|RFCS_NANEQ|REPLICATION factor C small subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 6 CNYFS 10
CNYFS
Sbjct: 136 CNYFS 140


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 YTCGKCNY 8
Y C KC Y
Sbjct: 393 YKCDKCGY 400


>sp|RS27A_METLZ|SMALL ribosomal subunit protein eS31|Methanocorpusculum labreanum

Query: 1 YTCGKCNY 8
++CGKC Y
Sbjct: 48 FSCGKCGY 55


>sp|RS27A_NANEQ|SMALL ribosomal subunit protein eS31|Nanoarchaeum equitans (strain

Query: 1 YTCGKCNY 8
Y CGKC Y
Sbjct: 36 YHCGKCGY 43


>sp|RS27A_METM6|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 1 YTCGKCNYFS 10
+ CGKC Y
Sbjct: 47 FACGKCGYLE 56


>sp|RS27A_METBU|SMALL ribosomal subunit protein eS31|Methanococcoides burtonii (strain

Query: 2 TCGKCNY 8
TCGKC Y
Sbjct: 38 TCGKCGY 44


>sp|RS27A_METM5|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 1 YTCGKCNYFS 10
+ CGKC Y
Sbjct: 47 FACGKCGYLE 56


>sp|RS27A_METBF|SMALL ribosomal subunit protein eS31|Methanosarcina barkeri (strain

Query: 2 TCGKCNY 8
TCGKC Y
Sbjct: 38 TCGKCGY 44


>sp|RNP4_METLZ|RIBONUCLEASE P protein component 4|Methanocorpusculum labreanum (strain ATCC

Query: 1 YTCGKC 6
YTCG C
Sbjct: 86 YTCGIC 91


>sp|RS27A_METMP|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 1 YTCGKCNYFS 10
+ CGKC Y
Sbjct: 47 FACGKCGYME 56


>sp|RS27A_METM7|SMALL ribosomal subunit protein eS31|Methanococcus maripaludis (strain

Query: 1 YTCGKCNYFS 10
+ CGKC Y
Sbjct: 47 FACGKCGYME 56


>sp|RS27A_METKA|SMALL ribosomal subunit protein eS31|Methanopyrus kandleri (strain AV19

Query: 1 YTCGKCNY 8
Y CG+C Y
Sbjct: 40 YACGRCGY 47


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC 51178

Query: 1 YTCGKCNY 8
Y C +C Y
Sbjct: 1059 YVCDQCGY 1066


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 YTCGKCNY 8
Y C +C Y
Sbjct: 1059 YVCDQCGY 1066


>sp|RS27A_METVS|SMALL ribosomal subunit protein eS31|Methanococcus vannielii (strain

Query: 1 YTCGKCNYFS 10
Y CGKC +
Sbjct: 51 YACGKCGFLE 60


>sp|RS27A_THEVO|SMALL ribosomal subunit protein eS31|Thermoplasma volcanium (strain

Query: 1 YTCGKCNY 8
+TCG+C Y
Sbjct: 37 FTCGRCGY 44


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CGKCNYF 9
C KCN F
Sbjct: 131 CPKCNRF 137


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 1 YTCGKCNY 8
Y C KC Y
Sbjct: 244 YECPKCGY 251


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 CGKCNY 8
CG CN+
Sbjct: 31 CGYCNF 36


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 CGKCNYF 9
C KCN F
Sbjct: 127 CEKCNKF 133


>sp|RS27A_METST|SMALL ribosomal subunit protein eS31|Methanosphaera stadtmanae (strain

Query: 1 YTCGKCNY 8
Y CG+C Y
Sbjct: 38 YACGRCGY 45


>sp|RL37A_HALSA|LARGE ribosomal subunit protein eL43|Halobacterium salinarum (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 54 WQCGKCGY 61


>sp|RL37A_HALS3|LARGE ribosomal subunit protein eL43|Halobacterium salinarum (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 54 WQCGKCGY 61


>sp|COFH2_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina acetivorans (strain

Query: 2 TCGKCNY 8
TCG C Y
Sbjct: 70 TCGFCAY 76


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 1 YTCGKCNY 8
+ C CNY
Sbjct: 71 FKCRNCNY 78


>sp|RS27A_SULTO|SMALL ribosomal subunit protein eS31|Sulfurisphaera tokodaii (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 48 WACGKCGY 55


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TCGKCNYF 9
TCG+C +
Sbjct: 331 TCGECKRY 338


>sp|SYW_PYRAB|TRYPTOPHAN--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 TCGKCNYF 9
TCG+C +
Sbjct: 331 TCGECKRY 338


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YTCGKCNY 8
Y C +C Y
Sbjct: 1058 YICDQCGY 1065


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 2 TCGKC----NYFS 10
TC KC NYF+
Sbjct: 474 TCSKCGHLNNYFN 486


Query: 1 YTCGKCNY 8
+ C KCN+
Sbjct: 498 FKCEKCNF 505


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 1 YTCGKCNY 8
Y C +C Y
Sbjct: 242 YECDRCGY 249


>sp|COFH_METM7|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcus maripaludis (strain C7

Query: 2 TCGKCNY 8
TCG C Y
Sbjct: 62 TCGFCAY 68


>sp|RS27A_SULAC|SMALL ribosomal subunit protein eS31|Sulfolobus acidocaldarius (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 52 WACGKCGY 59


>sp|TFE_NATPD|TRANSCRIPTION factor E|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YTCGKC 6
Y CG+C
Sbjct: 117 YLCGEC 122


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TCGKCNYF 9
T G C+YF
Sbjct: 320 TPGSCHYF 327


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTCGKCNY 8
+ CG C Y
Sbjct: 24 FNCGACGY 31


>sp|DHYS_THEVO|PROBABLE deoxyhypusine synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YTCGKCNY 8
Y CG NY
Sbjct: 104 YYCGSFNY 111


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 3 CGKCNY 8
C KCN+
Sbjct: 124 CTKCNF 129


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TCGKC 6
TCG+C
Sbjct: 330 TCGQC 334


>sp|RS27A_CALMQ|SMALL ribosomal subunit protein eS31|Caldivirga maquilingensis (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 49 WHCGKCGY 56


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 YTCGKC 6
Y CG+C
Sbjct: 447 YGCGRC 452


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 YTCGKC 6
Y C KC
Sbjct: 545 YVCAKC 550


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 TCGKCN 7
TC +CN
Sbjct: 176 TCSQCN 181


>sp|TFE_AERPE|TRANSCRIPTION factor E|Aeropyrum pernix (strain ATCC 700893

Query: 1 YTCGKC 6
YTC +C
Sbjct: 128 YTCPRC 133


>sp|RS27A_THEKO|SMALL ribosomal subunit protein eS31|Thermococcus kodakarensis (strain

Query: 1 YTCGKCNY 8
++CG+C Y
Sbjct: 45 WSCGRCGY 52


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 CGKCNYF 9
CGK +YF
Sbjct: 658 CGKESYF 664


>sp|RS27A_PICTO|SMALL ribosomal subunit protein eS31|Picrophilus torridus (strain ATCC

Query: 1 YTCGKCNY 8
++CG+C Y
Sbjct: 37 FSCGRCGY 44


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 3 CGKCN 7
CG CN
Sbjct: 207 CGSCN 211


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 3 CGKCNY 8
CG C Y
Sbjct: 155 CGHCGY 160


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 3 CGKCNY 8
C KCN+
Sbjct: 40 CEKCNF 45


>sp|RS27A_THEGJ|SMALL ribosomal subunit protein eS31|Thermococcus gammatolerans (strain

Query: 1 YTCGKCNY 8
++CG+C Y
Sbjct: 44 WSCGRCGY 51


>sp|PUS10_METV3|TRNA pseudouridine synthase Pus10|Methanococcus voltae (strain ATCC

Query: 3 CGKCNY 8
C KCN+
Sbjct: 294 CEKCNF 299


>sp|TF2B4_HALSA|TRANSCRIPTION initiation factor IIB 4|Halobacterium salinarum (strain ATCC

Query: 2 TCGKC 6
TCG+C
Sbjct: 49 TCGEC 53


>sp|TF2B_PYRWO|TRANSCRIPTION initiation factor IIB|Pyrococcus woesei

Query: 3 CGKCNY 8
C KC Y
Sbjct: 26 CAKCGY 31


>sp|TF2B_PYRFU|TRANSCRIPTION initiation factor IIB|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CGKCNY 8
C KC Y
Sbjct: 26 CAKCGY 31


>sp|TF2B2_THEKO|TRANSCRIPTION initiation factor IIB 2|Thermococcus kodakarensis (strain ATCC

Query: 3 CGKCNY 8
C KC Y
Sbjct: 29 CAKCGY 34


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 2 TCGKCN 7
TC +CN
Sbjct: 176 TCSECN 181


>sp|SUCD_METS5|SUCCINATE-SEMIALDEHYDE dehydrogenase (acetylating)|Metallosphaera sedula (strain ATCC

Query: 1 YTCGKC 6
+ CGKC
Sbjct: 87 HPCGKC 92


>sp|RS27A_ARCFU|SMALL ribosomal subunit protein eS31|Archaeoglobus fulgidus (strain

Query: 2 TCGKCNY 8
+CGKC Y
Sbjct: 43 SCGKCGY 49


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CGKCN 7
CGKC+
Sbjct: 97 CGKCS 101


>sp|RS27A_PYRAE|SMALL ribosomal subunit protein eS31|Pyrobaculum aerophilum (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 53 WHCGKCGY 60


>sp|QUEC1_SULTO|7-CYANO-7-DEAZAGUANINE synthase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YTCGKCN 7
Y CG+C+
Sbjct: 172 YHCGQCS 178


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 YTCGKCNYFS 10
Y C C Y S
Sbjct: 621 YRCTSCGYES 630


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YTCGKCNYF 9
Y C K NY
Sbjct: 43 YVCDKGNYL 51


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YTCGKCNY 8
Y C C Y
Sbjct: 420 YVCRNCGY 427


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YTCGKC 6
Y CG+C
Sbjct: 218 YHCGRC 223


>sp|RS27A_IGNH4|SMALL ribosomal subunit protein eS31|Ignicoccus hospitalis (strain

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 46 WHCGKCGY 53


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CGKCNY 8
CG C+Y
Sbjct: 198 CGSCHY 203


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CGKCNY 8
C KCN+
Sbjct: 314 CSKCNF 319


>sp|RS27A_PYRHO|SMALL ribosomal subunit protein eS31|Pyrococcus horikoshii (strain ATCC

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 38 WACGKCGY 45


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 3 CGKCN 7
CG CN
Sbjct: 165 CGSCN 169


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 2 TCGKC 6
TCG+C
Sbjct: 191 TCGRC 195


>sp|RS27A_AERPE|SMALL ribosomal subunit protein eS31|Aeropyrum pernix (strain ATCC

Query: 1 YTCGKCNY 8
+ CGKC Y
Sbjct: 48 WHCGKCGY 55




57|Sequence|281|290|CNYFSDRKNN

>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CNYFSDRKNN 10
CNY + +K N
Sbjct: 653 CNYLNWKKEN 662


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 FSDRKNN 10
FSD KNN
Sbjct: 211 FSDLKNN 217


>sp|FUCA_META3|L-FUCULOSE phosphate aldolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CNYFSDRK 8
C+Y DRK
Sbjct: 11 CHYLYDRK 18


>sp|TCPO_METOL|PROBABLE 2' cyclic ADP-D-ribose synthase|Methanobrevibacter olleyae

Query: 1 CNYFSD 6
CNYF D
Sbjct: 140 CNYFKD 145


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 2 NYFSDRKNN 10
NYF+ K N
Sbjct: 606 NYFNQAKGN 614




58|Sequence|286|295|DRKNNYVQHV

>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 4 NNYVQHV 10
NNYV+HV
Sbjct: 147 NNYVEHV 153


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DRKNNYVQ 8
DRKN+Y+
Sbjct: 114 DRKNDYLH 121


>sp|NCPP_SACS2|PROBABLE inosine/xanthosine triphosphatase|Saccharolobus solfataricus

Query: 1 DRKNNYVQHV 10
DRK YVQ +
Sbjct: 150 DRKTLYVQPI 159


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 2 RKNNYVQHV 10
RKN Y HV
Sbjct: 931 RKNAYYSHV 939


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 DRKNNYVQHV 10
D K + QH+
Sbjct: 324 DEKGTFAQHI 333




59|Sequence|291|300|YVQHVRTHTG

>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VQHVRTHTG 10
+QH+R HTG
Sbjct: 609 IQHMRHHTG 617


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VQHVRTHTG 10
+QH+R HTG
Sbjct: 607 IQHMRHHTG 615


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VQHVRTHTG 10
+QH+R HTG
Sbjct: 607 IQHMRHHTG 615


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VQHVRTHTG 10
+QH+R HTG
Sbjct: 607 IQHMRHHTG 615


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 YVQHVRT 7
YV+HV+T
Sbjct: 924 YVEHVKT 930


>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 YVQHVRTHT 9
YVQ VRT
Sbjct: 246 YVQEVRTKA 254


>sp|SPEE2_HYPBU|POLYAMINE aminopropyltransferase 2|Hyperthermus butylicus (strain DSM 5456

Query: 1 YVQHVRTHTG 10
YV +VR++ G
Sbjct: 224 YVSYVRSYNG 233


>sp|RL22_METKA|LARGE ribosomal subunit protein uL22|Methanopyrus kandleri (strain AV19 /

Query: 1 YVQHVRTHTG 10
Y++H+ H G
Sbjct: 119 YIKHIAAHKG 128


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VQHVRTHTG 10
++HV T TG
Sbjct: 124 IEHVVTETG 132


>sp|DHSD_ARCFU|SUCCINATE dehydrogenase hydrophobic membrane anchor|Archaeoglobus fulgidus

Query: 1 YVQHVRTH 8
YV H+ TH
Sbjct: 35 YVTHMTTH 42


>sp|RL22_METS3|LARGE ribosomal subunit protein uL22|Methanobrevibacter smithii (strain

Query: 1 YVQHVRTHTG 10
+++H+ +H G
Sbjct: 113 FIEHISSHRG 122




60|Sequence|296|305|RTHTGERPYK

>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RTHTGERPY 9
RTH GE+PY
Sbjct: 367 RTHGGEKPY 375


>sp|RNP2_THESM|RIBONUCLEASE P protein component 2|Thermococcus sibiricus (strain DSM 12597

Query: 4 TGERPYK 10
TGERP+K
Sbjct: 24 TGERPFK 30


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 RTHTGERPYK 10
+ H GER YK
Sbjct: 381 KKHGGERKYK 390


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 3 HTGERP 8
HTGE+P
Sbjct: 253 HTGEKP 258


>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 3 HTGERP 8
HTGE+P
Sbjct: 256 HTGEKP 261


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 4 TGERPYK 10
TG++PYK
Sbjct: 331 TGKKPYK 337


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 TGERPYK 10
TG++PYK
Sbjct: 331 TGKKPYK 337


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 4 TGERPYK 10
TG++PYK
Sbjct: 331 TGKKPYK 337


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 TGERPYK 10
TG++PYK
Sbjct: 331 TGKKPYK 337


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 4 TGERPYK 10
TG++PYK
Sbjct: 331 TGKKPYK 337


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 5 GERPY 9
GERPY
Sbjct: 112 GERPY 116


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 THTGERP 8
THTGE P
Sbjct: 118 THTGELP 124


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TGERPYK 10
TGE PYK
Sbjct: 584 TGEIPYK 590


>sp|RPO1C_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermoplasma acidophilum (strain ATCC

Query: 1 RTHTGERPYK 10
RT GE+ YK
Sbjct: 153 RTEWGEKAYK 162


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TGERPYK 10
TG+ PYK
Sbjct: 60 TGDMPYK 66


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 HTGERPYK 10
HTGE P++
Sbjct: 550 HTGEVPFE 557


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain

Query: 1 RTHTGER 7
+TH GER
Sbjct: 63 QTHAGER 69


>sp|URE23_SULTO|UREASE subunit gamma/beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 THTGERPYK 10
T+TG+RP +
Sbjct: 128 TNTGDRPIQ 136


>sp|RL18A_PYRCJ|LARGE ribosomal subunit protein eL20|Pyrobaculum calidifontis (strain

Query: 4 TGERPY 9
GERPY
Sbjct: 22 VGERPY 27


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 3 HTGERPY 9
H G RPY
Sbjct: 11 HLGARPY 17


>sp|RNP2_THEKO|RIBONUCLEASE P protein component 2|Thermococcus kodakarensis (strain ATCC

Query: 4 TGERPYK 10
GERP+K
Sbjct: 24 IGERPFK 30


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 1 RTHTGER 7
+TH GER
Sbjct: 63 QTHAGER 69


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 1 RTHTGER 7
+TH GER
Sbjct: 63 QTHAGER 69


>sp|RL2_METJA|LARGE ribosomal subunit protein uL2|Methanocaldococcus jannaschii (strain

Query: 2 THTGERPY 9
TH GER Y
Sbjct: 134 THDGERTY 141


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 1 RTHTGER 7
+TH GER
Sbjct: 79 QTHAGER 85


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 2 THTGERPY 9
TH G+R Y
Sbjct: 10 THLGKRQY 17




61|Sequence|301|310|ERPYKCELCP

>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PYKCELC 9
PYKC C
Sbjct: 184 PYKCYFC 190


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PYKCELCP 10
PY C LCP
Sbjct: 74 PYDCGLCP 81


>sp|RL34_METMP|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 1 ERPYKCELCP 10
ERP+ LCP
Sbjct: 66 ERPFGGNLCP 75


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ERPYKCELC 9
ERP K E C
Sbjct: 399 ERPTKTEAC 407


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ERPYKCELC 9
ERP K E C
Sbjct: 399 ERPTKTEAC 407


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 ERPYKCELC 9
ERP K E C
Sbjct: 399 ERPTKTEAC 407


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ERPYKCELC 9
ERP K E C
Sbjct: 399 ERPTKSEAC 407


>sp|RL34_META3|LARGE ribosomal subunit protein eL34|Methanococcus aeolicus (strain

Query: 1 ERPYKCELCP 10
ERPY LCP
Sbjct: 66 ERPYGGFLCP 75


>sp|RIBL_METBU|FAD synthase|Methanococcoides burtonii (strain DSM 6242

Query: 5 KCELC 9
KCELC
Sbjct: 121 KCELC 125


>sp|RL34_METJA|LARGE ribosomal subunit protein eL34|Methanocaldococcus jannaschii

Query: 1 ERPYKCELCP 10
ERPY LCP
Sbjct: 66 ERPYGGYLCP 75


>sp|ATGT_METS3|TRNA-GUANINE(15) transglycosylase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ERPYKCELC 9
E P CE+C
Sbjct: 270 EMPCSCEVC 278


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PYKCEL 8
PYKC++
Sbjct: 153 PYKCDI 158


>sp|PYRC_THEVO|DIHYDROOROTASE volcanium (strain ATCC 51530

Query: 2 RPYKCEL 8
RP +CEL
Sbjct: 193 RPIECEL 199


>sp|PUS10_PYRFU|TRNA pseudouridine synthase Pus10|Pyrococcus furiosus (strain ATCC

Query: 3 PYKCELC 9
P KCELC
Sbjct: 54 PEKCELC 60


>sp|RL34_STAMF|LARGE ribosomal subunit protein eL34|Staphylothermus marinus (strain

Query: 1 ERPYKCELCP 10
ERPY +CP
Sbjct: 66 ERPYGGYICP 75


>sp|PUS10_CENSY|TRNA pseudouridine synthase Pus10|Cenarchaeum symbiosum (strain A)

Query: 1 ERPYKCELC 9
+RP +C +C
Sbjct: 39 DRPSECHIC 47


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 5 KCELCP 10
KC+ CP
Sbjct: 7 KCDTCP 12


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 RPYKCELC 9
RP +C+ C
Sbjct: 156 RPTQCDTC 163


>sp|TRM1_METS3|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanobrevibacter smithii

Query: 2 RPYKCELC 9
+PYK E C
Sbjct: 180 KPYKSEYC 187


>sp|FER9_METJA|UNCHARACTERIZED ferredoxin MJ0265|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERPYKCELC 9
++ YKC LC
Sbjct: 96 DKAYKCILC 104


>sp|SYK_METJA|LYSINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ERPYKCELC 9
E Y+CE+C
Sbjct: 190 EITYRCEIC 198


>sp|Y207_METJA|UNCHARACTERIZED protein MJ0207|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KCELCP 10
KC LCP
Sbjct: 96 KCNLCP 101


>sp|RIBL_METMS|FAD synthase|Methanohalophilus mahii (strain ATCC 35705

Query: 2 RPYKCELC 9
+P++C LC
Sbjct: 118 KPHQCTLC 125


>sp|RL34_METKA|LARGE ribosomal subunit protein eL34|Methanopyrus kandleri (strain AV19

Query: 1 ERPYKCELCP 10
RPY LCP
Sbjct: 66 NRPYGGVLCP 75




62|Sequence|306|315|CELCPYSSSQ

>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 1 CELCPYSSSQ 10
CELC Y+ +
Sbjct: 235 CELCNYTGKK 244


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CELCPY 6
C +CPY
Sbjct: 332 CNICPY 337


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 1 CELCPYSSSQ 10
CE C Y+ Q
Sbjct: 192 CEACDYTGQQ 201


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CPYSSSQ 10
CPY SS+
Sbjct: 207 CPYDSSK 213


>sp|PUR5_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 CPYSSSQ 10
CPY SS+
Sbjct: 207 CPYDSSK 213


>sp|Y485_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELCPYS 7
++CPYS
Sbjct: 282 DMCPYS 287


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ELCPYSS 8
ELCPY++
Sbjct: 193 ELCPYNA 199


>sp|DCDB_METHJ|DCTP deaminase, dUMP-forming|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LCPYSSSQ 10
LCPY++ +
Sbjct: 156 LCPYNAKK 163


>sp|Y1157_METJA|PROBABLE sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELCPYSS 8
E CPYSS
Sbjct: 265 EPCPYSS 271


>sp|RS17_SULAC|SMALL ribosomal subunit protein uS17|Sulfolobus acidocaldarius (strain

Query: 2 ELCPYSSS 9
E CPY S
Sbjct: 26 EYCPYHGS 33


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELCPY 6
E+CPY
Sbjct: 140 EICPY 144


>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CELCPYSSS 9
C LCP +++
Sbjct: 211 CSLCPLANN 219


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 1 CELCPYSSS 9
CE+CP S
Sbjct: 177 CEVCPREKS 185


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 ELCPYSS 8
ELCPY +
Sbjct: 594 ELCPYGA 600


>sp|YF7B_METJA|UNCHARACTERIZED protein MJ1572.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CELCPYSS 8
C LC YS+
Sbjct: 82 CPLCIYST 89


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 1 CELCP 5
CE+CP
Sbjct: 181 CEVCP 185


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 1 CELCP 5
CE+CP
Sbjct: 181 CEVCP 185




63|Sequence|311|320|YSSSQKTHLT

>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YSSSQKTHLT 10
Y S +KT+LT
Sbjct: 515 YCSPEKTYLT 524




64|Sequence|316|325|KTHLTRHMRT

***** No hits found ******


65|Sequence|321|330|RHMRTHSGEK

>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RHMRTHSG 8
RHMR HS
Sbjct: 595 RHMRHHSA 602


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 RHMRTHSG 8
+HMR H+G
Sbjct: 608 QHMRHHTG 615


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 2 HMRTHSGE 9
HMR HS E
Sbjct: 134 HMREHSIE 141


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HMRTHSGEK 10
+ RTH GEK
Sbjct: 365 YARTHGGEK 373


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RHMRTHSG 8
+HMR H+G
Sbjct: 610 QHMRHHTG 617


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RHMRTHSG 8
+HMR H+G
Sbjct: 608 QHMRHHTG 615


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RHMRTHSG 8
+HMR H+G
Sbjct: 608 QHMRHHTG 615


>sp|ALAXM_METBF|ALANYL-TRNA editing protein AlaX-M|Methanosarcina barkeri (strain Fusaro /

Query: 1 RHMRTHSG 8
RHMR H+
Sbjct: 100 RHMRMHTA 107


>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 1 RHMRTHSG 8
RHMR H+
Sbjct: 102 RHMRMHTA 109


>sp|ALAXM_METMA|ALANYL-TRNA editing protein AlaX-M|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RHMRTHSG 8
RHMR H+
Sbjct: 102 RHMRMHTA 109




66|Sequence|326|335|HSGEKPFKCD

>sp|FLAJ_METJA|FLAGELLA accessory protein J|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HSGEKPFKCD 10
H+GEKP + D
Sbjct: 256 HTGEKPTETD 265


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HSGEKPFKC 9
HSG K F+C
Sbjct: 61 HSGRKIFEC 69


>sp|RNP2_THEKO|RIBONUCLEASE P protein component 2|Thermococcus kodakarensis (strain ATCC

Query: 3 GEKPFKCD 10
GE+PFK D
Sbjct: 25 GERPFKKD 32


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 HSGEKPFKCD 10
H+GEKP D
Sbjct: 253 HTGEKPTAID 262


>sp|RTCA_SULTO|RNA 3'-terminal phosphate cyclase|Sulfurisphaera tokodaii (strain DSM

Query: 2 SGEKPF 7
SGEKPF
Sbjct: 326 SGEKPF 331


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 GEKPFKC 9
E+PFKC
Sbjct: 110 AEEPFKC 116


>sp|RNP2_THESM|RIBONUCLEASE P protein component 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 SGEKPFK 8
+GE+PFK
Sbjct: 24 TGERPFK 30


>sp|RNP2_THEGJ|RIBONUCLEASE P protein component 2|Thermococcus gammatolerans (strain DSM

Query: 3 GEKPFKCD 10
GE+PF+ D
Sbjct: 25 GERPFRKD 32


>sp|DPHB_ARCFU|DIPHTHINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGEKPFKCD 10
SGE+ KCD
Sbjct: 196 SGEEVVKCD 204


>sp|ARCA_HALS3|ARGININE deiminase|Halobacterium salinarum (strain ATCC 29341

Query: 1 HSGEKPF 7
H GEKP+
Sbjct: 369 HGGEKPY 375


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 3 GEKPFKC 9
GEKP C
Sbjct: 391 GEKPITC 397


>sp|FTTA_LOKSG|TRANSCRIPTION termination factor FttA|Lokiarchaeum sp. (strain GC14_75)

Query: 1 HSGEKPFKCD 10
H G+ PF D
Sbjct: 472 HQGKNPFLSD 481


>sp|RS6E_NANEQ|SMALL ribosomal subunit protein eS6|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 GEKPFK 8
GEKPF+
Sbjct: 110 GEKPFE 115


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HSGEKPFK 8
H+GE PF+
Sbjct: 550 HTGEVPFE 557


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 SGEKPF 7
+GEKPF
Sbjct: 508 TGEKPF 513


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 1 HSGEKPFKC 9
H G K F C
Sbjct: 122 HHGAKAFAC 130


>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HSGEKPF 7
HSG KP+
Sbjct: 14 HSGLKPY 20


>sp|SURE_METMP|5'-NUCLEOTIDASE SurE|Methanococcus maripaludis (strain DSM 14266

Query: 1 HSGEKPFKC 9
H G K F C
Sbjct: 120 HHGAKSFAC 128


>sp|DEOC_THEAC|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HSGEKPF 7
HSG KP+
Sbjct: 14 HSGLKPY 20


>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGEKPFKC 9
+GEK KC
Sbjct: 864 AGEKAMKC 871


>sp|Y009_METJA|UNCHARACTERIZED protein MJ0009|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEKPFKC 9
GEK F C
Sbjct: 216 GEKQFSC 222


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 EKPFKC 9
EKPF C
Sbjct: 241 EKPFLC 246




67|Sequence|331|340|PFKCDQCSYV

>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FKCDQCSYV 10
+ CDQC YV
Sbjct: 1058 YICDQCGYV 1066


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC 51178

Query: 2 FKCDQCSYV 10
+ CDQC Y+
Sbjct: 1059 YVCDQCGYI 1067


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 FKCDQCSYV 10
+ CDQC Y+
Sbjct: 1059 YVCDQCGYI 1067


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 2 FKCDQCSY 9
+KCD+C Y
Sbjct: 393 YKCDKCGY 400


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 FKCDQCSY 9
++CD+C Y
Sbjct: 242 YECDRCGY 249


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PFKCDQC 7
P KCD+C
Sbjct: 146 PGKCDEC 152


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 69 CDQCCY 74


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 73 CDQCCY 78


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 2 FKCDQCSY 9
FKC C+Y
Sbjct: 71 FKCRNCNY 78


>sp|CS12F_UNCAX|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f1|Uncultured archaeon

Query: 2 FKCDQCSY 9
FKC++C++
Sbjct: 498 FKCEKCNF 505


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 73 CDQCCY 78


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 FKCDQCSYV 10
FKC +C +V
Sbjct: 713 FKCPKCGHV 721


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 FKCDQCSYV 10
FKC +C +V
Sbjct: 701 FKCPKCGHV 709


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FKCDQCSYV 10
FKC +C +V
Sbjct: 702 FKCPKCGHV 710


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 FKCDQCSYV 10
FKC +C +V
Sbjct: 704 FKCPKCGHV 712


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 72 CDQCCY 77


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 72 CDQCCY 77


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 73 CDQCCY 78


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FKCDQCSY 9
FKC C Y
Sbjct: 71 FKCRNCGY 78


>sp|ACDA2_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 72 CDQCCY 77


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKCDQCSYV 10
F+CD+CS +
Sbjct: 45 FECDECSCI 53


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 73 CDQCCY 78


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 4 CDQCSY 9
CDQC Y
Sbjct: 73 CDQCCY 78


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 PF--KCDQCSYV 10
PF +CDQC +
Sbjct: 168 PFNPRCDQCGRI 179


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FKCDQCSYV 10
FKC C +V
Sbjct: 71 FKCRNCGHV 79


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FKCDQCSYV 10
F+C QC+ V
Sbjct: 134 FRCSQCNGV 142


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KCDQCSY 9
KC CSY
Sbjct: 123 KCTSCSY 129


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 2 FKCDQCSY 9
+KC +C Y
Sbjct: 382 YKCPKCGY 389


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 2 FKCDQCSY 9
+KC +C Y
Sbjct: 389 YKCPKCGY 396


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 4 CDQCSYV 10
C++C YV
Sbjct: 74 CEKCGYV 80


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 PFKCDQCS 8
P KC CS
Sbjct: 594 PLKCRGCS 601


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 KCDQCSYV 10
+C+QC++V
Sbjct: 405 ECNQCAFV 412


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 PFKCDQC 7
P KCD C
Sbjct: 145 PGKCDLC 151


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 KCDQC 7
KCD+C
Sbjct: 559 KCDEC 563


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 3 KCDQCSY 9
KC+ C Y
Sbjct: 332 KCNNCDY 338


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 3 KCDQCSY 9
KC+ C Y
Sbjct: 332 KCNNCDY 338


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 3 KCDQCSY 9
KC+ C Y
Sbjct: 332 KCNNCDY 338


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PFKCD 5
P+KCD
Sbjct: 153 PYKCD 157


>sp|Y851_PICTO|UPF0179 protein PTO0851|Picrophilus torridus (strain ATCC 700027

Query: 3 KCDQCS 8
KCD+CS
Sbjct: 27 KCDECS 32


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 2 FKCDQCSY 9
KC +C Y
Sbjct: 371 LKCKKCGY 378


>sp|KAD_THESM|ADENYLATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 PFKCDQC 7
P KCD C
Sbjct: 145 PGKCDIC 151


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PFKCDQC 7
P KCD C
Sbjct: 145 PGKCDIC 151


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FKCDQCSY 9
F C CSY
Sbjct: 189 FICKYCSY 196


>sp|TFS_SULAC|TRANSCRIPTION factor S|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FKCDQCSYV 10
+KC +C Y+
Sbjct: 22 YKCSKCGYI 30


>sp|RL44E_DESA1|LARGE ribosomal subunit protein eL42|Desulfurococcus amylolyticus

Query: 2 FKCDQCSYV 10
KC +C Y+
Sbjct: 76 LKCSKCGYI 84


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 PFKCDQC 7
P KCD C
Sbjct: 145 PGKCDIC 151


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 2 FKCDQCSY 9
KC +C Y
Sbjct: 370 LKCKRCGY 377


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 2 FKCDQCSY 9
KC +C Y
Sbjct: 370 LKCKRCGY 377


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KCDQCSYV 10
KCD+C +
Sbjct: 83 KCDRCGAI 90


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PFKCDQCSY 9
P KC CS+
Sbjct: 184 PEKCPSCSH 192


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 3 KCDQCSYV 10
KC +C Y+
Sbjct: 123 KCTRCDYM 130


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 3 KCDQCS 8
KCD CS
Sbjct: 72 KCDCCS 77


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 FKCDQCSY 9
F C+ CSY
Sbjct: 11 FCCNWCSY 18


>sp|RNP4_HALSA|RIBONUCLEASE P protein component 4|Halobacterium salinarum (strain ATCC 700922

Query: 2 FKCDQCSYV 10
F CD C V
Sbjct: 53 FTCDDCDAV 61


>sp|RNP4_HALS3|RIBONUCLEASE P protein component 4|Halobacterium salinarum (strain ATCC 29341

Query: 2 FKCDQCSYV 10
F CD C V
Sbjct: 53 FTCDDCDAV 61


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 FKCDQCSY 9
F C+ CSY
Sbjct: 11 FCCNWCSY 18


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 2 FKCDQCSYV 10
+C C YV
Sbjct: 138 LRCSYCEYV 146


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 KCDQC 7
KCD+C
Sbjct: 433 KCDRC 437


>sp|TFE_METVS|TRANSCRIPTION factor E|Methanococcus vannielii (strain ATCC 35089

Query: 2 FKCDQCSYV 10
F+C QC V
Sbjct: 134 FRCPQCGGV 142


>sp|RNP4_METTH|RIBONUCLEASE P protein component 4|Methanothermobacter thermautotrophicus

Query: 2 FKCDQCSYV 10
F+C +C ++
Sbjct: 87 FRCHECGHI 95


>sp|KAD_ARCFU|ADENYLATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 KCDQC 7
KCD+C
Sbjct: 149 KCDKC 153


>sp|HYPA_METKA|HYDROGENASE maturation factor HypA|Methanopyrus kandleri (strain AV19 /

Query: 2 FKCDQCSY 9
FKC +C +
Sbjct: 71 FKCAECGH 78


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 2 FKCDQCS 8
+KC +CS
Sbjct: 370 YKCRECS 376


>sp|HMD_METJA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CDQCSYV 10
CD CS V
Sbjct: 250 CDMCSAV 256


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 FKCDQCSY 9
F C+ CSY
Sbjct: 654 FLCNWCSY 661


>sp|TFE_METM5|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C5 /

Query: 2 FKCDQC 7
F+C QC
Sbjct: 134 FRCPQC 139


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKCDQCSY 9
+KC C+Y
Sbjct: 19 YKCPYCNY 26


>sp|TFE_METMP|TRANSCRIPTION factor E|Methanococcus maripaludis (strain DSM 14266

Query: 2 FKCDQC 7
F+C QC
Sbjct: 134 FRCPQC 139


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 FKCDQCSY 9
F C+ CSY
Sbjct: 654 FLCNWCSY 661


>sp|Y737_METJA|UNCHARACTERIZED protein MJ0737|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FKCDQCSYV 10
+KC C YV
Sbjct: 4 WKCSNCGYV 12


>sp|TFE_METM7|TRANSCRIPTION factor E|Methanococcus maripaludis (strain C7 /

Query: 2 FKCDQC 7
F+C QC
Sbjct: 134 FRCPQC 139


>sp|TIAS_IGNH4|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignicoccus hospitalis (strain

Query: 3 KCDQCSY 9
KC +C Y
Sbjct: 332 KCKKCGY 338


>sp|CAS4_THETK|CRISPR-ASSOCIATED exonuclease Cas4|Thermoproteus tenax (strain ATCC 35583

Query: 1 PFKCDQCSY 9
P KC C Y
Sbjct: 168 PAKCQNCWY 176


>sp|RS21_METJA|SMALL ribosomal subunit protein aS21|Methanocaldococcus jannaschii

Query: 1 PFKCDQCSY 9
P+KC +C +
Sbjct: 46 PYKCPKCGF 54


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 2 FKCDQCSY 9
++C +C Y
Sbjct: 242 YECSKCGY 249


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 PFKCDQCS 8
P KCD+C
Sbjct: 72 PEKCDKCG 79




68|Sequence|336|345|QCSYVASNQH

>sp|Y4618_METAC|UPF0313 protein MA_4618|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CSYVASNQH 10
CS+ A QH
Sbjct: 456 CSFCAITQH 464


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CSYVASNQH 10
CS+ A QH
Sbjct: 338 CSFCAITQH 346


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CSYVASNQ 9
C+Y+ NQ
Sbjct: 581 CAYIEENQ 588




69|Sequence|341|350|ASNQHEVTRH

>sp|RSAMH_PYRHO|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 HEVTRH 10
H VTRH
Sbjct: 36 HSVTRH 41




70|Sequence|346|355|EVTRHARQVH

>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EVTRHARQV 9
++ RH RQV
Sbjct: 169 DIVRHTRQV 177


>sp|DAPAL_PYRHO|UNCHARACTERIZED DapA-like lyase PH0847|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EVTRHARQV 9
E+T+HA+++
Sbjct: 84 ELTKHAKEI 92


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VTRHARQVH 10
VTRH R H
Sbjct: 173 VTRHGRLQH 181


>sp|YPZ4_METTF|UNCHARACTERIZED protein ORF4'|Methanothermobacter thermautotrophicus

Query: 2 VTRHARQVH 10
V H RQ+H
Sbjct: 46 VNEHKRQLH 54


>sp|YPV4_METTF|UNCHARACTERIZED protein ORF4|Methanothermobacter thermautotrophicus

Query: 2 VTRHARQVH 10
V H RQ+H
Sbjct: 46 VNEHKRQLH 54


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EVTRHARQV 9
E+T+HA+ +
Sbjct: 85 ELTKHAKDI 93


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 EVTRHARQVH 10
+VT+H R+ H
Sbjct: 42 DVTKHLREEH 51


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 VTRHARQVH 10
VTRH +H
Sbjct: 296 VTRHKLDIH 304


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EVTRHARQV 9
E+ RH R+V
Sbjct: 26 EIRRHVREV 34




71|Sequence|351|360|ARQVHNGPKP

>sp|GATD_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Saccharolobus solfataricus (strain

Query: 2 RQVHNGPK 9
R+VHNG K
Sbjct: 84 REVHNGAK 91


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 3 QVHNGPKP 10
Q+ NGP P
Sbjct: 25 QIRNGPLP 32


>sp|RF1_HALMA|PEPTIDE chain release factor subunit|Haloarcula marismortui (strain ATCC

Query: 2 RQVHNGPK 9
+Q+HNG K
Sbjct: 293 KQLHNGDK 300


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 HNGPKP 10
+NGP+P
Sbjct: 761 YNGPRP 766


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 ARQVHNGPKP 10
R ++N P P
Sbjct: 185 GRSIYNAPNP 194


>sp|GLCS_SACS2|GLUCOSE-BINDING protein GlcS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ARQVHNGPK 9
A QVH GP+
Sbjct: 133 AFQVHYGPE 141




72|Sequence|356|365|NGPKPLNCPH

>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 225 GVKPMNCP 232


>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 312 GIKPMNCP 319


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 229 GIKPMNCP 236


>sp|SYTC_METS5|THREONINE--TRNA ligase catalytic subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 221 GIKPMNCP 228


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 328 GLKPMNCP 335


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 328 GLKPMNCP 335


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 328 GLKPMNCP 335


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 328 GLKPMNCP 335


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 328 GLKPMNCP 335


>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 220 GLKPMNCP 227


>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GPKPLNCP 9
G KP+NCP
Sbjct: 312 GIKPMNCP 319


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 4 KPLNCPH 10
KP+NCP+
Sbjct: 108 KPMNCPY 114


>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 1 NGPKPLNCP 9
N P +NCP
Sbjct: 144 NSPDEINCP 152


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 2 GPKPLNCP 9
G P+NCP
Sbjct: 109 GVHPVNCP 116


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NGPKPLN 7
NGP+P N
Sbjct: 762 NGPRPAN 768


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC

Query: 2 GPKPLNC 8
G +PLNC
Sbjct: 49 GMRPLNC 55


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 2 GPKPLNC 8
G +PLNC
Sbjct: 49 GMRPLNC 55


>sp|FLAF_METVO|PUTATIVE flagella-related protein F|Methanococcus voltae

Query: 1 NGPKPLNCPH 10
NG + L+C H
Sbjct: 72 NGTETLSCEH 81


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 2 GPKPLNCPH 10
GP+PL+ H
Sbjct: 173 GPEPLHADH 181


>sp|Y1628_METJA|UNCHARACTERIZED protein MJ1628|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GPKPLNCP 9
GPK +N P
Sbjct: 215 GPKDVNIP 222




73|Sequence|361|370|LNCPHCDYKT

>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNCPHCDY 8
L CP+C+Y
Sbjct: 648 LGCPYCNY 655


>sp|MOBB_METJA|PUTATIVE molybdopterin-guanine dinucleotide biosynthesis

Query: 1 LNCPHCDY 8
LNC HC Y
Sbjct: 153 LNCGHCGY 160


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 1 LNCPHCDYK 9
L CPHC K
Sbjct: 144 LECPHCGEK 152


>sp|RPO12_METJA|DNA-DIRECTED RNA polymerase subunit Rpo12|Methanocaldococcus jannaschii

Query: 2 NCPHCDYKT 10
CPHC YK
Sbjct: 23 RCPHCSYKI 31


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 3 CPHCDYK 9
CPHC+ K
Sbjct: 146 CPHCNEK 152


>sp|ISF2_ARCFU|IRON-SULFUR flavoprotein AF_1519|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 CPHCDY 8
C HCDY
Sbjct: 45 CQHCDY 50


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 CPHCDYK 9
CP+C YK
Sbjct: 145 CPYCGYK 151


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 1 LNCPHC 6
L CPHC
Sbjct: 296 LGCPHC 301


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 LNCPHCDYK 9
+NCP C +K
Sbjct: 71 INCPECGFK 79


>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 3 CPHCDY 8
C HCDY
Sbjct: 46 CLHCDY 51


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 LNCPHCDYK 9
L CP C Y+
Sbjct: 323 LRCPECGYE 331


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 3 CPHCDY 8
CP+CD+
Sbjct: 214 CPNCDF 219


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LNCPHCDYK 9
L CPHC K
Sbjct: 214 LICPHCGNK 222


>sp|APBC_PYRFU|IRON-SULFUR cluster carrier protein|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LNCPHCDYK 9
L CPHC K
Sbjct: 214 LICPHCGNK 222


>sp|APBC_PYRAB|IRON-SULFUR cluster carrier protein|Pyrococcus abyssi (strain GE5 /

Query: 1 LNCPHCDYK 9
L CPHC K
Sbjct: 214 LICPHCGNK 222


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 LNCPHCDYKT 10
+ CP+C Y++
Sbjct: 235 MQCPNCLYRS 244


>sp|Y1264_HALSA|UPF0212 protein VNG_1264C|Halobacterium salinarum (strain ATCC 700922

Query: 2 NCPHCDYKT 10
+CPHC T
Sbjct: 49 SCPHCGTDT 57


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CPHCD 7
CPHC+
Sbjct: 177 CPHCE 181


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 CPHCD 7
CPHC+
Sbjct: 146 CPHCE 150


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 CPHCD 7
CPHC+
Sbjct: 146 CPHCE 150


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 3 CPHCD 7
CPHC+
Sbjct: 668 CPHCN 672


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 3 CPHCDYK 9
CPHC K
Sbjct: 146 CPHCGEK 152


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 3 CPHCD 7
CPHC+
Sbjct: 669 CPHCN 673


>sp|QUEE_METTH|7-CARBOXY-7-DEAZAGUANINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LNCPHCD 7
LNC +CD
Sbjct: 36 LNCSYCD 42


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 LNCPHCDYK 9
L CP CD +
Sbjct: 46 LRCPFCDTR 54


>sp|PMDHL_METMA|PHOSPHOMEVALONATE dehydratase large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LNCPHC 6
+ CPHC
Sbjct: 285 IGCPHC 290


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 LNCPHC 6
+ CPHC
Sbjct: 299 IGCPHC 304


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 LNCPHCDYK 9
L CP C Y+
Sbjct: 235 LQCPTCAYR 243


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 NCPHC 6
+CPHC
Sbjct: 148 HCPHC 152


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 2 NCPHC 6
+CPHC
Sbjct: 148 HCPHC 152


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 1 LNCPHCDYK 9
L CP CD K
Sbjct: 36 LVCPMCDSK 44


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 3 CPHCDYKT 10
CP CD +T
Sbjct: 700 CPACDTET 707


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 1 LNCPHC 6
CPHC
Sbjct: 444 FTCPHC 449


>sp|TFE_META3|TRANSCRIPTION factor E|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CPHCDYK 9
CP C++K
Sbjct: 117 CPRCEFK 123


>sp|Y1165_HALMA|UPF0212 protein rrnAC1165|Haloarcula marismortui (strain ATCC 43049

Query: 2 NCPHC 6
+CPHC
Sbjct: 49 HCPHC 53


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 3 CPHCDYKT 10
CPHC +T
Sbjct: 257 CPHCGVET 264


Query: 1 LNCPHCDYK 9
+ CP C Y+
Sbjct: 235 MQCPKCLYR 243


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 141 CPYCGYE 147


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 143 CPYCGYE 149


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 3 CPHCDYK 9
CP CD K
Sbjct: 197 CPQCDGK 203


Query: 3 CPHCD 7
CP CD
Sbjct: 154 CPDCD 158


>sp|Y078_METHJ|UPF0212 protein Mhun_0078|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LNCPHCD 7
L+CP+C+
Sbjct: 49 LSCPYCE 55


>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 3 CPHC 6
CPHC
Sbjct: 261 CPHC 264


>sp|THIO_METJA|THIOREDOXIN jannaschii (strain ATCC 43067

Query: 3 CPHC 6
CPHC
Sbjct: 14 CPHC 17


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CPHC 6
CPHC
Sbjct: 475 CPHC 478


>sp|SYV_NANEQ|VALINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 3 CPHC 6
CPHC
Sbjct: 164 CPHC 167


Query: 3 CPHCDY 8
CP C Y
Sbjct: 401 CPKCGY 406


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 CPHC 6
CPHC
Sbjct: 144 CPHC 147


>sp|SYM_METMA|METHIONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CPHC 6
CPHC
Sbjct: 151 CPHC 154


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 CPHC 6
CPHC
Sbjct: 177 CPHC 180


Query: 3 CPHC 6
CPHC
Sbjct: 199 CPHC 202


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 CPHC 6
CPHC
Sbjct: 147 CPHC 150


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 3 CPHC 6
CPHC
Sbjct: 150 CPHC 153


>sp|RPO1N_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanococcus vannielii (strain ATCC

Query: 3 CPHC 6
CPHC
Sbjct: 102 CPHC 105


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 3 CPHC 6
CPHC
Sbjct: 102 CPHC 105


Query: 3 CPHC 6
CPHC
Sbjct: 149 CPHC 152


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 3 CPHC 6
CPHC
Sbjct: 19 CPHC 22


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 3 CPHC 6
CPHC
Sbjct: 61 CPHC 64


>sp|NIFE_METMP|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 PHCDY 8
PHCD+
Sbjct: 441 PHCDF 445


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NCPHC 6
+CPHC
Sbjct: 146 SCPHC 150


>sp|Y1348_METJA|UNCHARACTERIZED protein MJ1348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCPHCDY 8
N P CDY
Sbjct: 52 NVPKCDY 58


>sp|QUEE_METJA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNCPHCDYKT 10
LNC +CD ++
Sbjct: 30 LNCVYCDEES 39


>sp|NIFE_METMI|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanococcus

Query: 4 PHCDY 8
PHCD+
Sbjct: 441 PHCDF 445


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NCPHC 6
NCP+C
Sbjct: 67 NCPYC 71


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CPHC 6
CPHC
Sbjct: 151 CPHC 154


>sp|TRM1_NATPD|TRNA (guanine(26)-N(2))-dimethyltransferase|Natronomonas pharaonis

Query: 3 CPHCDYKT 10
CPHC T
Sbjct: 254 CPHCGQST 261


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 CPHC 6
CPHC
Sbjct: 144 CPHC 147


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPHCDY 8
CP+C+Y
Sbjct: 21 CPYCNY 26


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 CPHCDY 8
CP+C Y
Sbjct: 148 CPYCGY 153


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 CPHCDY 8
CP+C Y
Sbjct: 156 CPYCGY 161


>sp|Y157_METAC|UPF0251 protein MA_0157|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CPHCDYKT 10
CP C Y+T
Sbjct: 134 CPACGYET 141


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 CPHCDY 8
CP+C Y
Sbjct: 145 CPYCHY 150


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 LNCPHCDYK 9
+NC H YK
Sbjct: 349 MNCEHVRYK 357


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 3 CPHCDYKT 10
CP CD T
Sbjct: 677 CPSCDEHT 684


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 3 CPHCDYK 9
CP C Y+
Sbjct: 384 CPKCGYR 390


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPHCDY 8
CP C+Y
Sbjct: 189 CPFCNY 194


>sp|NRDR_NATPD|TRANSCRIPTIONAL repressor NrdR|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LNCPHC 6
+NCP C
Sbjct: 1 MNCPDC 6


>sp|NRDR_HALMD|TRANSCRIPTIONAL repressor NrdR|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 LNCPHC 6
+NCP C
Sbjct: 1 MNCPDC 6


>sp|NRDR_HALLT|TRANSCRIPTIONAL repressor NrdR|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LNCPHC 6
+NCP C
Sbjct: 1 MNCPDC 6


>sp|AHBD_METBF|ADOMET-DEPENDENT heme synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LNCPHC 6
LNC HC
Sbjct: 21 LNCVHC 26


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 3 CPHCDYKT 10
CP C ++T
Sbjct: 246 CPRCGFQT 253


>sp|COFH2_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina mazei (strain ATCC

Query: 2 NCPHCDYKT 10
NC C Y+T
Sbjct: 70 NCGFCAYRT 78


>sp|COFH2_METBF|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 2|Methanosarcina barkeri (strain

Query: 2 NCPHCDYKT 10
NC C Y+T
Sbjct: 70 NCGFCAYRT 78


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 3 CPHCDYK 9
CP C Y+
Sbjct: 391 CPKCGYR 397


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 CPHC 6
CPHC
Sbjct: 144 CPHC 147


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 NCPHCD 7
+CP CD
Sbjct: 354 HCPECD 359


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 3 CPHCD 7
CP CD
Sbjct: 182 CPQCD 186


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 3 CPHCD 7
CP CD
Sbjct: 182 CPQCD 186


>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 CPHC 6
CPHC
Sbjct: 148 CPHC 151


Query: 3 CPHCD 7
CP CD
Sbjct: 132 CPSCD 136


>sp|TRM1_SULAC|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfolobus acidocaldarius

Query: 3 CPHCDYK 9
CP C Y+
Sbjct: 246 CPKCGYR 252


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 2 NCPHCDYKT 10
NC + DY++
Sbjct: 58 NCKYADYRS 66


>sp|RPO12_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum aerophilum (strain ATCC

Query: 1 LNCPHCDYK 9
+ CP+C++K
Sbjct: 28 IRCPYCNFK 36


>sp|RL37A_ARCFU|LARGE ribosomal subunit protein eL43|Archaeoglobus fulgidus (strain

Query: 3 CPHCDYK 9
C HC YK
Sbjct: 56 CRHCGYK 62


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 CPHCD 7
CP CD
Sbjct: 60 CPECD 64


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 3 CPHCD 7
CP CD
Sbjct: 218 CPECD 222


>sp|RPO12_PYRCJ|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum calidifontis (strain DSM

Query: 1 LNCPHCDYK 9
+ CP+C++K
Sbjct: 28 IRCPYCNFK 36


>sp|FEN_PICTO|FLAP endonuclease 1|Picrophilus torridus (strain ATCC 700027

Query: 1 LNCPHCDYK 9
+N PH DY+
Sbjct: 281 MNPPHNDYE 289


>sp|RPO12_PYRAR|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum arsenaticum (strain DSM

Query: 1 LNCPHCDYK 9
+ CP+C++K
Sbjct: 28 IRCPYCNFK 36


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 3 CPHCD 7
CP CD
Sbjct: 160 CPECD 164


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 3 CPHCDYK 9
CP C+Y+
Sbjct: 42 CPVCEYR 48


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPHCD 7
CP CD
Sbjct: 182 CPRCD 186


>sp|DNAJ_HALWD|CHAPERONE protein DnaJ|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CPHCD 7
CP CD
Sbjct: 204 CPRCD 208


>sp|RL37A_PICTO|LARGE ribosomal subunit protein eL43|Picrophilus torridus (strain ATCC

Query: 3 CPHCDYK 9
C HC YK
Sbjct: 57 CRHCSYK 63


>sp|RL37A_THEAC|LARGE ribosomal subunit protein eL43|Thermoplasma acidophilum (strain

Query: 3 CPHCDYK 9
C HC YK
Sbjct: 57 CRHCGYK 63


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 3 CPHCDYKT 10
CP+C+ +T
Sbjct: 568 CPNCEEET 575


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 3 CPHCDYKT 10
CP+C+ +T
Sbjct: 568 CPNCEEET 575


>sp|RL44E_HALMA|LARGE ribosomal subunit protein eL42|Haloarcula marismortui (strain

Query: 3 CPHCD 7
CPHC+
Sbjct: 11 CPHCN 15


>sp|RL37A_THEVO|LARGE ribosomal subunit protein eL43|Thermoplasma volcanium (strain

Query: 3 CPHCDYK 9
C HC YK
Sbjct: 57 CRHCGYK 63


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CPHCDYK 9
CP C+Y+
Sbjct: 42 CPVCEYR 48


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 3 CPHCD 7
CP CD
Sbjct: 745 CPECD 749


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPHCDY 8
CP CDY
Sbjct: 29 CPFCDY 34


>sp|RPO12_PYRNV|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrobaculum neutrophilum (strain DSM

Query: 1 LNCPHCDYK 9
+ CP+C++K
Sbjct: 28 IRCPYCNFK 36


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 CPHCD 7
CP CD
Sbjct: 759 CPKCD 763


>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LNCPHCD 7
LNC +CD
Sbjct: 39 LNCNYCD 45


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 2 NCPHC 6
NCP C
Sbjct: 354 NCPKC 358


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 LNCPHCDY 8
+ C +CDY
Sbjct: 331 IKCNNCDY 338


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 2 NCPHC 6
NCP C
Sbjct: 353 NCPKC 357


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 2 NCPHC 6
NCP C
Sbjct: 354 NCPKC 358


>sp|AMZA_THEKO|ARCHAEMETZINCIN kodakarensis (strain ATCC BAA-918

Query: 3 CPHCDYK 9
CP+C+ K
Sbjct: 171 CPNCERK 177


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 1 LNCPHCDYK 9
+ CP+C Y+
Sbjct: 24 VRCPYCGYR 32


>sp|TIAS_PYRHO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Pyrococcus horikoshii (strain

Query: 1 LNCPHCDYK 9
L C C YK
Sbjct: 370 LKCKRCGYK 378


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 NCPHCDYK 9
NC H YK
Sbjct: 332 NCEHVRYK 339


>sp|RPO12_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus shibatae (strain ATCC

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus solfataricus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|RPO12_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo12|Saccharolobus islandicus (strain

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|QUEE_ARCFU|7-CARBOXY-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LNCPHCD 7
LNC +CD
Sbjct: 33 LNCYYCD 39


>sp|PANB_PYRNV|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PHCD 7
PHCD
Sbjct: 204 PHCD 207


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PHCD 7
PHCD
Sbjct: 204 PHCD 207


>sp|PANB_PYRCJ|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 PHCD 7
PHCD
Sbjct: 208 PHCD 211


>sp|PANB_PYRAR|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PHCD 7
PHCD
Sbjct: 206 PHCD 209


>sp|PANB_PYRAE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PHCD 7
PHCD
Sbjct: 205 PHCD 208


>sp|PANB_METS5|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 4 PHCD 7
PHCD
Sbjct: 202 PHCD 205


>sp|IF2G_HALSA|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 CPHCD 7
CP CD
Sbjct: 59 CPDCD 63


>sp|IF2G_HALS3|TRANSLATION initiation factor 2 subunit|Halobacterium salinarum (strain ATCC

Query: 3 CPHCD 7
CP CD
Sbjct: 59 CPDCD 63


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NCPHC 6
NCP+C
Sbjct: 120 NCPNC 124


>sp|TF2B1_HALSA|TRANSCRIPTION initiation factor IIB 1|Halobacterium salinarum (strain ATCC

Query: 3 CPHCD 7
CP CD
Sbjct: 7 CPECD 11


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 LNCPHCDYK 9
++CP C ++
Sbjct: 249 IHCPKCGFR 257


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 3 CPHCD 7
C HCD
Sbjct: 17 CDHCD 21


>sp|PYRI_METAR|ASPARTATE carbamoyltransferase regulatory chain|Methanocella arvoryzae

Query: 1 LNCPHCDY 8
L C +C+Y
Sbjct: 138 LRCSYCEY 145


>sp|TIAS_THESM|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus sibiricus (strain

Query: 1 LNCPHCDYK 9
L C C YK
Sbjct: 371 LKCKKCGYK 379


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 CPHCD 7
CP CD
Sbjct: 187 CPSCD 191


>sp|RPO12_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfurisphaera tokodaii (strain DSM

Query: 1 LNCPHCDYK 9
+ CP+C YK
Sbjct: 24 VRCPYCGYK 32


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LNCPHC 6
L+CP C
Sbjct: 108 LSCPRC 113


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 1 LNCPHC 6
L+CP C
Sbjct: 677 LSCPRC 682


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 LNCPHC 6
L+CP C
Sbjct: 670 LSCPRC 675


>sp|PYRI_METBF|ASPARTATE carbamoyltransferase regulatory chain|Methanosarcina barkeri

Query: 1 LNCPHCDY 8
LNC +C++
Sbjct: 138 LNCLYCEH 145


>sp|RL44E_NATPD|LARGE ribosomal subunit protein eL42|Natronomonas pharaonis (strain

Query: 3 CPHC 6
CPHC
Sbjct: 11 CPHC 14


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CPHCDYK 9
CP+C ++
Sbjct: 143 CPYCGFE 149


>sp|SYM_SULAC|METHIONINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CPHCDYK 9
CP+C ++
Sbjct: 143 CPYCGFE 149


>sp|SYM_SACS2|METHIONINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CPHCDYK 9
CP+C ++
Sbjct: 143 CPYCGFE 149


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 CPHCDYK 9
CP+C ++
Sbjct: 143 CPYCGFE 149


>sp|SYM_METS5|METHIONINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 CPHCDYK 9
CP+C ++
Sbjct: 143 CPYCGFE 149


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 CPHCDYK 9
CP+C ++
Sbjct: 143 CPYCGFE 149


>sp|RL37A_METTH|LARGE ribosomal subunit protein eL43|Methanothermobacter

Query: 3 CPHCD 7
CP CD
Sbjct: 38 CPSCD 42


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NCPH 5
NCPH
Sbjct: 164 NCPH 167


>sp|RL37A_METS3|LARGE ribosomal subunit protein eL43|Methanobrevibacter smithii (strain

Query: 3 CPHCD 7
CP CD
Sbjct: 38 CPRCD 42


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 5 HCDYKT 10
HC YK+
Sbjct: 61 HCSYKS 66


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 HCDYKT 10
HC YK+
Sbjct: 61 HCSYKS 66


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACS2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus solfataricus (strain ATCC

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACI7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.G.57.14

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACI6|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.4 /

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACI4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.14.25 /

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACI3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain M.16.27)

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACI2|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_SACI1|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Saccharolobus islandicus (strain Y.N.15.51

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 5 HCDYKT 10
HC YK+
Sbjct: 53 HCSYKS 58


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 5 HCDYKT 10
HC YK+
Sbjct: 36 HCSYKS 41


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC

Query: 5 HCDYKT 10
HC YK+
Sbjct: 34 HCSYKS 39


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 LNCPHCDYKT 10
N HC +KT
Sbjct: 95 FNPRHCTFKT 104


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 3 CPHCDY 8
CP C+Y
Sbjct: 452 CPFCEY 457


>sp|C2M5_METJA|PUTATIVE control protein C.MjaVP|Methanocaldococcus jannaschii (strain

Query: 2 NCPHCD 7
NCP C+
Sbjct: 10 NCPKCN 15


>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CPHCD 7
CP CD
Sbjct: 97 CPECD 101


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 3 CPHCDYK 9
CP+C Y+
Sbjct: 179 CPYCGYR 185


>sp|Y795_METJA|UNCHARACTERIZED protein MJ0795|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCPHCDYK 9
N P+ DYK
Sbjct: 101 NAPNYDYK 108


>sp|TRM1_METMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina mazei (strain

Query: 2 NCPHCDYK 9
+CP C ++
Sbjct: 250 HCPRCGFR 257


>sp|PYRI_METMJ|ASPARTATE carbamoyltransferase regulatory chain|Methanoculleus marisnigri

Query: 1 LNCPHCDY 8
L+C +CD+
Sbjct: 137 LHCLYCDW 144


>sp|NOP10_METTH|RIBOSOME biogenesis protein Nop10|Methanothermobacter thermautotrophicus

Query: 3 CPHCDYKT 10
CPHC +T
Sbjct: 18 CPHCGGRT 25


>sp|RL44E_HALSA|LARGE ribosomal subunit protein eL42|Halobacterium salinarum (strain

Query: 3 CPHCD 7
CP+CD
Sbjct: 11 CPNCD 15


>sp|RL37A_METST|LARGE ribosomal subunit protein eL43|Methanosphaera stadtmanae (strain

Query: 3 CPHCD 7
CP CD
Sbjct: 38 CPKCD 42


>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCPHCDYK 9
N P CD K
Sbjct: 622 NYPECDVK 629


>sp|Y119_METJA|UNCHARACTERIZED protein MJ0119|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LNCPHCDYK 9
NC C YK
Sbjct: 24 FNCGACGYK 32


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 1 LNCPHCDY 8
L C +CD+
Sbjct: 137 LRCHYCDW 144


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 3 CPHCDY 8
CP C+Y
Sbjct: 457 CPFCEY 462


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 1 LNCPHCDYK 9
+NC CD K
Sbjct: 184 VNCQRCDEK 192


>sp|RPO12_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo12|Pyrococcus horikoshii (strain ATCC

Query: 1 LNCPHCDYK 9
L CP+C K
Sbjct: 25 LRCPYCGSK 33


>sp|QUEE_METHJ|7-CARBOXY-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LNCPHCD 7
L+C +CD
Sbjct: 63 LSCSYCD 69




74|Sequence|366|375|CDYKTADRSN

>sp|TSR3_THEVO|16S rRNA aminocarboxypropyltransferase|Thermoplasma volcanium (strain

Query: 2 DYKTADRS 9
+Y TADRS
Sbjct: 146 EYSTADRS 153


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DYKTADRSN 10
DYKTA S+
Sbjct: 362 DYKTAQTSD 370




75|Sequence|371|380|ADRSNFKKHV

>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DRSNFKKHV 10
D +FK+H+
Sbjct: 289 DERDFKRHI 297


>sp|Y2601_AERPE|UNCHARACTERIZED protein APE_2601.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 DRSNFKKH 9
D+S FK+H
Sbjct: 192 DKSIFKRH 199


>sp|Y706_METJA|UNCHARACTERIZED protein MJ0706|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NFKKHV 10
NF+KHV
Sbjct: 68 NFQKHV 73


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 1 ADRSNFKKH 9
DRS F+KH
Sbjct: 139 GDRSAFEKH 147


>sp|DPCKG_NITMS|GTP-DEPENDENT dephospho-CoA kinase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 ADRSNFKKHV 10
AD+ N KH+
Sbjct: 14 ADKENILKHL 23




76|Sequence|376|385|FKKHVELHVN

>sp|KCY_THEKO|CYTIDYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FKKHVELH 8
F+K+VELH
Sbjct: 54 FQKYVELH 61


>sp|YPZ11_METTF|UNCHARACTERIZED protein ORF11'|Methanothermobacter thermautotrophicus

Query: 1 FKKHVELHVN 10
F+ HV +H+N
Sbjct: 60 FEDHVYMHLN 69


>sp|KCY_PYRFU|CYTIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FKKHVELH 8
F+K+ ELH
Sbjct: 54 FQKYAELH 61


>sp|HIS4_METVS|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii (strain

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 4 HVELHV 9
HVE+HV
Sbjct: 342 HVEIHV 347


>sp|HIS4_METVA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus vannielii

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|HIS4_METM7|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 FKKHVELH 8
F+K+ ELH
Sbjct: 54 FQKYAELH 61


>sp|HIS4_METM5|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|KCY_PYRHO|CYTIDYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FKKHVELH 8
F+K+ ELH
Sbjct: 54 FQKYAELH 61


>sp|HIS4_METTL|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanothermococcus

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|HIS4_METMP|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|HIS4_METM6|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus maripaludis

Query: 2 KKHVEL 7
KKHVEL
Sbjct: 24 KKHVEL 29


>sp|HIS4_META3|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanococcus aeolicus (strain

Query: 2 KKHVEL 7
KKH+EL
Sbjct: 24 KKHIEL 29


>sp|Y449_METJA|UNCHARACTERIZED transporter MJ0449|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 HVELHV 9
HVELHV
Sbjct: 239 HVELHV 244




77|Sequence|381|390|ELHVNPRQFN

>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 NPRQFN 10
NPR+FN
Sbjct: 796 NPREFN 801


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus (strain

Query: 2 LHVNPRQFN 10
H++ R+FN
Sbjct: 120 FHIDKREFN 128


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 3 HVNPR 7
HVNPR
Sbjct: 235 HVNPR 239


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|RL22_METAC|LARGE ribosomal subunit protein uL22|Methanosarcina acetivorans (strain

Query: 1 ELHVNPRQ 8
ELH++P++
Sbjct: 22 ELHISPKK 29


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 ELHVNPRQF 9
E H+N +QF
Sbjct: 181 ERHLNSKQF 189


>sp|RL22_METMA|LARGE ribosomal subunit protein uL22|Methanosarcina mazei (strain ATCC

Query: 1 ELHVNPRQ 8
ELH++P++
Sbjct: 22 ELHISPKK 29


>sp|RL22_METBF|LARGE ribosomal subunit protein uL22|Methanosarcina barkeri (strain

Query: 1 ELHVNPRQ 8
ELH++P++
Sbjct: 22 ELHISPKK 29


>sp|PYRC_PYRHO|DIHYDROOROTASE horikoshii (strain ATCC 700860

Query: 1 ELHVNPRQFN 10
++HV+ R FN
Sbjct: 58 DVHVHLRDFN 67


>sp|PYRC_PYRAB|DIHYDROOROTASE abyssi (strain GE5 /

Query: 1 ELHVNPRQFN 10
++HV+ R FN
Sbjct: 55 DVHVHLRDFN 64


>sp|CSA3_METJA|CRISPR locus-related putative DNA-binding protein|Methanocaldococcus

Query: 2 LHVNPRQFN 10
+ VNP +FN
Sbjct: 75 VEVNPYEFN 83


>sp|RL22_METBU|LARGE ribosomal subunit protein uL22|Methanococcoides burtonii (strain

Query: 1 ELHVNPRQ 8
ELH++P++
Sbjct: 22 ELHISPKK 29




78|Sequence|386|395|PRQFNCPVCD

>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 QFNCPVCD 10
QF CP CD
Sbjct: 125 QFYCPDCD 132


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FNCPVC 9
+NCP+C
Sbjct: 545 YNCPIC 550


>sp|TFE_THEKO|TRANSCRIPTION factor E|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 QFNCPVC 9
+F CP+C
Sbjct: 134 EFQCPIC 140


>sp|RL37A_METM5|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 RQFNCPVC 9
+++ CPVC
Sbjct: 37 KEYKCPVC 44


>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 6 CPVCD 10
CPVCD
Sbjct: 19 CPVCD 23


>sp|RL37A_METM7|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 RQFNCPVC 9
+++ CPVC
Sbjct: 37 KEYKCPVC 44


>sp|RL37A_METM6|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 RQFNCPVC 9
+++ CPVC
Sbjct: 37 KEYKCPVC 44


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 5 NCPVC 9
NCPVC
Sbjct: 213 NCPVC 217


>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 5 NCPVC 9
NCPVC
Sbjct: 206 NCPVC 210


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 5 NCPVC 9
NCPVC
Sbjct: 213 NCPVC 217


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 5 NCPVC 9
NCPVC
Sbjct: 213 NCPVC 217


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 5 NCPVC 9
NCPVC
Sbjct: 212 NCPVC 216


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 5 NCPVC 9
NCPVC
Sbjct: 210 NCPVC 214


>sp|TFE_PYRFU|TRANSCRIPTION factor E|Pyrococcus furiosus (strain ATCC 43587

Query: 4 FNCPVC 9
F CP+C
Sbjct: 136 FQCPIC 141


>sp|TFE_PYRAB|TRANSCRIPTION factor E|Pyrococcus abyssi (strain GE5 /

Query: 4 FNCPVC 9
F CP+C
Sbjct: 134 FTCPIC 139


>sp|RL37A_METVS|LARGE ribosomal subunit protein eL43|Methanococcus vannielii (strain

Query: 2 RQFNCPVC 9
+++ CPVC
Sbjct: 37 KEYKCPVC 44


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 PRQFNCPVC 9
P + CPVC
Sbjct: 33 PNENTCPVC 41


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 5 NCPVC 9
NCPVC
Sbjct: 209 NCPVC 213


>sp|MFNF_METJA|(4- jannaschii (strain ATCC 43067

Query: 2 RQFNCPV 8
+ FNCPV
Sbjct: 83 KAFNCPV 89


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 5 NCPVC 9
NCP+C
Sbjct: 225 NCPIC 229


>sp|MTMW_METWO|TYPE II methyltransferase M.MwoI|Methanothermobacter wolfeii

Query: 3 QFNCPVC 9
QF CP C
Sbjct: 443 QFTCPHC 449


>sp|PYRI_METLZ|ASPARTATE carbamoyltransferase regulatory chain|Methanocorpusculum labreanum

Query: 1 PRQFNCPVCD 10
PR F C CD
Sbjct: 133 PRGFRCQYCD 142


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CPVCD 10
CP+CD
Sbjct: 5 CPICD 9


Query: 6 CPVCD 10
CPVC+
Sbjct: 21 CPVCE 25


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 5 NCPVC 9
NCP+C
Sbjct: 213 NCPIC 217


>sp|RL37A_META3|LARGE ribosomal subunit protein eL43|Methanococcus aeolicus (strain

Query: 2 RQFNCPVC 9
+ + CPVC
Sbjct: 37 KAYKCPVC 44


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 4 FNCPVCD 10
+ CPVC+
Sbjct: 327 YKCPVCN 333


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RQFNCPVC 9
R CPVC
Sbjct: 128 RGLRCPVC 135


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 5 NCPVC 9
NCP+C
Sbjct: 212 NCPIC 216


>sp|RL37A_METJA|LARGE ribosomal subunit protein eL43|Methanocaldococcus jannaschii

Query: 2 RQFNCPVC 9
+++ CPVC
Sbjct: 35 KKYKCPVC 42


>sp|RL37A_METMP|LARGE ribosomal subunit protein eL43|Methanococcus maripaludis (strain

Query: 2 RQFNCPVC 9
+ + CPVC
Sbjct: 37 KDYKCPVC 44


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 6 CPVCD 10
CP+CD
Sbjct: 444 CPICD 448


>sp|Y530_METJA|UNCHARACTERIZED ZPR1-like protein MJ0530|Methanocaldococcus jannaschii (strain

Query: 2 RQFNCPVC 9
++ +CPVC
Sbjct: 5 QRLDCPVC 12


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QFNCPVC 9
+F CP C
Sbjct: 498 RFKCPTC 504


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRQFNCPVC 9
P CPVC
Sbjct: 458 PEGSKCPVC 466


>sp|APBC_METMP|IRON-SULFUR cluster carrier protein|Methanococcus maripaludis (strain DSM 14266

Query: 4 FNCPVCD 10
F CP CD
Sbjct: 216 FVCPECD 222


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 6 CPVCD 10
CP+CD
Sbjct: 38 CPMCD 42


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 PRQFNCPVC 9
P CPVC
Sbjct: 458 PEGSRCPVC 466


>sp|HMPTM_METJA|7,8-DIHYDRO-6-HYDROXYMETHYLPTERIN dimethyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 FNCPVC 9
NCP+C
Sbjct: 100 LNCPIC 105


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QFNCPVC 9
QF CP C
Sbjct: 123 QFYCPNC 129


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 2 RQFNCPVCD 10
R+ CP CD
Sbjct: 422 RRGVCPTCD 430


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 4 FNCPVCD 10
+ CP CD
Sbjct: 757 YRCPKCD 763


>sp|HYPA_METS3|HYDROGENASE maturation factor HypA|Methanobrevibacter smithii (strain ATCC

Query: 1 PRQFNCPVC 9
P + NCP C
Sbjct: 68 PVEINCPEC 76


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PRQFNCPVC 9
P CPVC
Sbjct: 459 PEGKKCPVC 467


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 RQFNCPVC 9
R+ CP+C
Sbjct: 459 RKEKCPIC 466


>sp|TFE_PYRHO|TRANSCRIPTION factor E|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FNCPVC 9
F CP+C
Sbjct: 134 FVCPIC 139


>sp|TFE_METHJ|TRANSCRIPTION factor E|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 FNCPVC 9
+NCP C
Sbjct: 119 YNCPNC 124


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 PRQFNCPVC 9
P NCP C
Sbjct: 350 PTAGNCPKC 358


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 PRQFNCPVC 9
P CPVC
Sbjct: 1319 PLNGKCPVC 1327


>sp|TFE_METST|TRANSCRIPTION factor E|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 QFNCPVCD 10
QF CP C+
Sbjct: 146 QFICPRCN 153


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PRQFNCPVC 9
P CPVC
Sbjct: 143 PHTKKCPVC 151


>sp|TF2B_PYRAB|TRANSCRIPTION initiation factor IIB|Pyrococcus abyssi (strain GE5 /

Query: 2 RQFNCPVC 9
+Q CPVC
Sbjct: 3 KQRVCPVC 10


>sp|TFE_SULTO|TRANSCRIPTION factor E|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QFNCPVC 9
+F CP C
Sbjct: 134 EFKCPKC 140


>sp|TFE_METS5|TRANSCRIPTION factor E|Metallosphaera sedula (strain ATCC 51363

Query: 3 QFNCPVC 9
+F CP C
Sbjct: 134 EFKCPKC 140


>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 PRQFNCPVC 9
P NCP C
Sbjct: 350 PAAGNCPKC 358


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRQFNCPVC 9
P CPVC
Sbjct: 1132 PLDGKCPVC 1140


>sp|TF2B_PYRHO|TRANSCRIPTION initiation factor IIB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 RQFNCPVC 9
+Q CPVC
Sbjct: 3 KQKVCPVC 10


>sp|TFE_METMA|TRANSCRIPTION factor E|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 QFNCPVC 9
+F CP+C
Sbjct: 132 EFLCPMC 138


>sp|TFE_METAC|TRANSCRIPTION factor E|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 QFNCPVC 9
+F CP+C
Sbjct: 135 EFLCPMC 141


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 FNCPVC 9
+ CP+C
Sbjct: 35 YKCPIC 40


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 6 CPVCD 10
CPVCD
Sbjct: 78 CPVCD 82


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 6 CPVCD 10
CP CD
Sbjct: 700 CPACD 704


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 FNCPVCD 10
CPVC+
Sbjct: 6 LTCPVCN 12


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 4 FNCPVC 9
+ CP+C
Sbjct: 35 YRCPIC 40


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 6 CPVCD 10
CPVC+
Sbjct: 468 CPVCN 472


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 FNCPVC 9
+ CP+C
Sbjct: 35 YRCPIC 40


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 6 CPVCD 10
CPVC+
Sbjct: 429 CPVCE 433


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 6 CPVCD 10
CP CD
Sbjct: 426 CPACD 430


>sp|TRM1_HALMA|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloarcula marismortui

Query: 5 NCPVCD 10
+CPVC+
Sbjct: 253 DCPVCE 258


>sp|TFE_METBF|TRANSCRIPTION factor E|Methanosarcina barkeri (strain Fusaro /

Query: 3 QFNCPVC 9
+F CP+C
Sbjct: 132 EFLCPMC 138


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 FNCPVC 9
+ CP+C
Sbjct: 459 YKCPIC 464


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FNCPVCD 10
+ CP CD
Sbjct: 27 YKCPFCD 33


>sp|KPTA_PYRAE|PROBABLE RNA 2'-phosphotransferase|Pyrobaculum aerophilum (strain ATCC

Query: 4 FNCPVC 9
+ CPVC
Sbjct: 5 YKCPVC 10


>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 FNCPVC 9
F CP C
Sbjct: 133 FTCPFC 138


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 QFNCPVC 9
+ CPVC
Sbjct: 8 RLRCPVC 14


>sp|RGYR1_SACS2|REVERSE gyrase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QFNCPVC 9
Q CP+C
Sbjct: 718 QNKCPIC 724


>sp|ATGT_HALSA|TRNA-GUANINE(15) transglycosylase|Halobacterium salinarum (strain ATCC 700922

Query: 5 NCPVC 9
+CPVC
Sbjct: 280 DCPVC 284


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 RQFNCPVC 9
R CPVC
Sbjct: 385 RLAECPVC 392


>sp|Y2293_ARCFU|UNCHARACTERIZED protein AF_2293|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QFNCPVCD 10
+ CP+CD
Sbjct: 2 EIECPICD 9


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 FNCPVC 9
+ CP+C
Sbjct: 35 YRCPIC 40


>sp|TFE_METMJ|TRANSCRIPTION factor E|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 FNCPVCD 10
F CP C+
Sbjct: 138 FECPNCE 144


>sp|TFE_METLZ|TRANSCRIPTION factor E|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 FNCPVC 9
F+CP C
Sbjct: 176 FSCPQC 181


>sp|Y2357_METMA|UPF0212 protein MM_2357|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 NCPVC 9
+CPVC
Sbjct: 50 SCPVC 54


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 6 CPVCD 10
CP CD
Sbjct: 48 CPFCD 52


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 5 NCPVC 9
+CPVC
Sbjct: 276 SCPVC 280


>sp|ATGT_THEKO|TRNA-GUANINE(15) transglycosylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 NCPVC 9
+CPVC
Sbjct: 276 SCPVC 280


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 NCPVC 9
+CPVC
Sbjct: 280 SCPVC 284


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 NCPVC 9
+CPVC
Sbjct: 280 SCPVC 284


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 5 NCPVC 9
+CPVC
Sbjct: 280 SCPVC 284


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 NCPVC 9
+CPVC
Sbjct: 277 SCPVC 281


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 NCPVC 9
+CPVC
Sbjct: 282 SCPVC 286


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 NCPVC 9
+CPVC
Sbjct: 277 SCPVC 281


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 5 NCPVC 9
+CPVC
Sbjct: 279 SCPVC 283


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 5 NCPVC 9
+CPVC
Sbjct: 273 SCPVC 277


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC

Query: 2 RQFNCPVC 9
++ CP+C
Sbjct: 41 QKLRCPIC 48


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 QFNCPVCD 10
QF C CD
Sbjct: 123 QFYCEKCD 130


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 QFNCPVCD 10
QF C CD
Sbjct: 123 QFYCEKCD 130


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 QFNCPVCD 10
QF C CD
Sbjct: 123 QFYCEKCD 130


>sp|TFE_METKA|TRANSCRIPTION factor E|Methanopyrus kandleri (strain AV19 /

Query: 3 QFNCPVC 9
+F CP C
Sbjct: 144 EFRCPKC 150


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 3 QFNCPVC 9
+F CP C
Sbjct: 132 EFMCPAC 138


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PRQFNCPVC 9
P CP+C
Sbjct: 1297 PLDGKCPIC 1305


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 6 CPVCD 10
CP+C+
Sbjct: 565 CPICE 569


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 6 CPVCD 10
CP+C+
Sbjct: 564 CPICE 568


>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 PRQFNCPVCD 10
P +CP CD
Sbjct: 350 PAIGHCPECD 359


>sp|ATGT_HALMA|TRNA-GUANINE(15) transglycosylase|Haloarcula marismortui (strain ATCC 43049

Query: 5 NCPVC 9
+CPVC
Sbjct: 279 HCPVC 283


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 NCPVC 9
+CPVC
Sbjct: 280 SCPVC 284


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 5 NCPVC 9
+CPVC
Sbjct: 277 SCPVC 281


>sp|HYPA_METMA|HYDROGENASE maturation factor HypA|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 NCPVC 9
+CPVC
Sbjct: 104 DCPVC 108


>sp|RL37A_METTH|LARGE ribosomal subunit protein eL43|Methanothermobacter

Query: 2 RQFNCPVCD 10
R+ CP CD
Sbjct: 34 RKHVCPSCD 42


>sp|Y890_METJA|UPF0148 protein MJ0890|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 CPVCD 10
CP+C+
Sbjct: 57 CPICE 61


>sp|SCAF_PYRFU|DUF35 domain-containing scaffold protein|Pyrococcus furiosus (strain

Query: 1 PRQFNCPVC 9
P++ CP+C
Sbjct: 33 PKRPICPIC 41


>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 6 CPVCD 10
CPVC+
Sbjct: 42 CPVCE 46


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 NCPVC 9
NCP C
Sbjct: 67 NCPYC 71


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 CPVCD 10
CPVC+
Sbjct: 42 CPVCE 46


>sp|RL37A_PYRFU|LARGE ribosomal subunit protein eL43|Pyrococcus furiosus (strain ATCC

Query: 2 RQFNCPVC 9
++ CPVC
Sbjct: 34 QKHTCPVC 41


>sp|IF2B_THEPD|TRANSLATION initiation factor 2 subunit|Thermofilum pendens (strain DSM 2475

Query: 6 CPVCD 10
CPVC+
Sbjct: 108 CPVCE 112


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 5 NCPVC 9
NCP+C
Sbjct: 289 NCPLC 293


>sp|C2M5_METJA|PUTATIVE control protein C.MjaVP|Methanocaldococcus jannaschii (strain

Query: 5 NCPVCD 10
NCP C+
Sbjct: 10 NCPKCN 15


>sp|IF2B_PYRCJ|TRANSLATION initiation factor 2 subunit|Pyrobaculum calidifontis (strain DSM

Query: 6 CPVCD 10
CPVC+
Sbjct: 101 CPVCN 105




79|Sequence|391|400|CPVCDYAASK

>sp|Y1270_PYRAB|UPF0148 protein PYRAB12700|Pyrococcus abyssi (strain GE5 /

Query: 1 CPVCDYAASK 10
CPVC+Y K
Sbjct: 42 CPVCEYREKK 51


>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 1 CPVCDYAAS 9
CPVCD A +
Sbjct: 19 CPVCDGAGT 27


>sp|Y795_PYRHO|UPF0148 protein PH0795|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 CPVCDY 6
CPVC+Y
Sbjct: 42 CPVCEY 47


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPVCDYAASK 10
CP+CD K
Sbjct: 5 CPICDGTGKK 14


>sp|IF5A_METM6|TRANSLATION initiation factor 5A|Methanococcus maripaludis (strain C6 /

Query: 1 CPVCDYAASK 10
C V DYA SK
Sbjct: 25 CKVMDYAHSK 34


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 CPVCDYAASK 10
C + DYA SK
Sbjct: 164 CKIIDYAKSK 173


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPVCDYA 7
CP C+Y+
Sbjct: 189 CPFCNYS 195


>sp|DNLJ_HALLT|DNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 CPVCD 5
CP+CD
Sbjct: 444 CPICD 448


>sp|Y3527_METJA|UNCHARACTERIZED protein MJECL27|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPVCDY 6
CP CDY
Sbjct: 29 CPFCDY 34


>sp|KPRS_THEAC|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 VCDYAASK 10
VCDY A K
Sbjct: 277 VCDYIAGK 284


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CPVCDY 6
CP C+Y
Sbjct: 650 CPYCNY 655


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 3 VCDYAAS 9
+CDY AS
Sbjct: 454 ICDYCAS 460


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 1 CPVCD 5
CP+CD
Sbjct: 38 CPMCD 42


>sp|Y3406_METJA|UNCHARACTERIZED protein MJECS06|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPVCDY 6
CP C+Y
Sbjct: 21 CPYCNY 26


>sp|SYM_THEAC|METHIONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 145 CPYCHYPKAR 154


>sp|RNP4_THEAC|RIBONUCLEASE P protein component 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 CPVCD 5
CPVCD
Sbjct: 78 CPVCD 82


>sp|SYM_THEVO|METHIONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 145 CPYCGYKKAR 154


>sp|SYR_METVS|ARGININE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CPVCDYAASK 10
CPV YA ++
Sbjct: 448 CPVIQYAHAR 457


>sp|SYR_METMP|ARGININE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 CPVCDYAASK 10
CPV YA ++
Sbjct: 448 CPVIQYAHAR 457


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 CPVCDYAASK 10
CPV YA ++
Sbjct: 448 CPVIQYAHAR 457


>sp|SYR_METM6|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 CPVCDYAASK 10
CPV YA ++
Sbjct: 448 CPVIQYAHAR 457


>sp|SYR_METM5|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 CPVCDYAASK 10
CPV YA ++
Sbjct: 448 CPVIQYAHAR 457


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 CPVCDYAA 8
CP CD+
Sbjct: 214 CPNCDFTG 221


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 1 CPVCD 5
CP CD
Sbjct: 426 CPTCD 430


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 143 CPYCGYEKAR 152


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 CPVCD 5
CP CD
Sbjct: 426 CPACD 430


>sp|TIAS_THEPD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermofilum pendens (strain DSM

Query: 1 CPVCDYAASK 10
CP C Y A +
Sbjct: 384 CPKCGYRAKE 393


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 143 CPYCGYERAR 152


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 143 CPYCGYERAR 152


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 143 CPYCGYERAR 152


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 143 CPYCGYERAR 152


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 143 CPYCGYERAR 152


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 CPVCD 5
CP CD
Sbjct: 700 CPACD 704


>sp|QUEE_HYPBU|7-CARBOXY-7-DEAZAGUANINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 CPVCD 5
CP CD
Sbjct: 48 CPFCD 52


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 CPVCDYAASK 10
CP C Y ++
Sbjct: 156 CPYCGYPYAR 165


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 CPVCDY 6
CP C Y
Sbjct: 148 CPYCGY 153


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 CPVCDY 6
CP C Y
Sbjct: 143 CPYCGY 148


>sp|SYM_KORCO|METHIONINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 CPVCDY 6
CP C Y
Sbjct: 141 CPYCGY 146


>sp|Y2293_ARCFU|UNCHARACTERIZED protein AF_2293|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CPVCD 5
CP+CD
Sbjct: 5 CPICD 9


>sp|YF7B_METJA|UNCHARACTERIZED protein MJ1572.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CPVCDYA 7
CP+C Y+
Sbjct: 82 CPLCIYS 88


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 1 CPVCDYAASK 10
C VC++ K
Sbjct: 147 CEVCNFTGKK 156


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 1 CPVCDY 6
CP C+Y
Sbjct: 457 CPFCEY 462


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 1 CPVCDY 6
CP C+Y
Sbjct: 452 CPFCEY 457


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei (strain

Query: 1 CPVCDY 6
CP C Y
Sbjct: 237 CPTCAY 242


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 CPVCDYAASK 10
C VCD A K
Sbjct: 495 CVVCDNPAFK 504


>sp|RL37A_METJA|LARGE ribosomal subunit protein eL43|Methanocaldococcus jannaschii

Query: 1 CPVCDY 6
CPVC +
Sbjct: 39 CPVCGF 44




80|Sequence|396|405|YAASKKCNLQ

>sp|TF2B_METTH|TRANSCRIPTION initiation factor IIB|Methanothermobacter thermautotrophicus

Query: 1 YAASKKCNL 9
YAA +KCN+
Sbjct: 173 YAACRKCNV 181


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AASKKCNLQ 10
A +KKCNL+
Sbjct: 16 AVTKKCNLR 24


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 YAASKKCNL 9
YAA ++CN+
Sbjct: 173 YAACRRCNV 181


>sp|MOAA_METJA|PROBABLE GTP 3',8-cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 SKKCNLQ 10
+ KCNLQ
Sbjct: 17 TNKCNLQ 23


>sp|CAPPA_PICTO|PHOSPHOENOLPYRUVATE carboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 YAASKKCNL 9
YAAS+ C +
Sbjct: 234 YAASRLCKM 242




81|Sequence|401|410|KCNLQYHFKS

>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CNLQYHFKS 10
C L YHFK+
Sbjct: 176 CFLAYHFKA 184


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 2 CNLQYHFK 9
CN+Q+ FK
Sbjct: 279 CNIQFAFK 286


>sp|CARB_METB6|CARBAMOYL phosphate synthase large chain|Methanoregula boonei (strain DSM

Query: 2 CNLQYHFK 9
CN+Q+ FK
Sbjct: 279 CNIQFAFK 286


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 4 LQYHFKS 10
+QYHFK+
Sbjct: 215 VQYHFKT 221


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 CNLQYHFK 9
CN+QY K
Sbjct: 281 CNIQYALK 288


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 CNLQYHFK 9
CN+QY K
Sbjct: 281 CNIQYALK 288


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 CNLQYHFK 9
CN+QY K
Sbjct: 281 CNIQYALK 288


>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 2 CNLQYHFKS 10
C YH+KS
Sbjct: 84 CKKPYHYKS 92


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 2 CNLQYHFKS 10
C YH+KS
Sbjct: 84 CKKPYHYKS 92


>sp|RL2_NITMS|LARGE ribosomal subunit protein uL2|Nitrosopumilus maritimus (strain

Query: 2 CNLQYHF 8
CN++ HF
Sbjct: 108 CNIEKHF 114


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCNLQY 6
+CN+QY
Sbjct: 1118 RCNIQY 1123




82|Sequence|406|415|YHFKSKHPTC

>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 YHFKSKHP 8
YH K +HP
Sbjct: 134 YHLKDRHP 141


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 3 FKSKHPTC 10
FK K+PTC
Sbjct: 106 FKCKNPTC 113


>sp|PYRI_PYRAE|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum aerophilum

Query: 3 FKSKHPTC 10
FK K+PTC
Sbjct: 106 FKCKNPTC 113


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 2 HFKSKHP 8
H+K KHP
Sbjct: 229 HYKGKHP 235


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 FKSKHP 8
FK+KHP
Sbjct: 184 FKAKHP 189


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YHFKSK 6
YHFK+K
Sbjct: 180 YHFKAK 185


>sp|METK_METTH|S-ADENOSYLMETHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FKSKHP 8
FK KHP
Sbjct: 185 FKKKHP 190


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 1 YHFKSKHP 8
YH K K P
Sbjct: 301 YHLKKKFP 308


>sp|AROD_METAR|3-DEHYDROQUINATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 3 FKSKHPTC 10
KSK P C
Sbjct: 161 LKSKRPVC 168


>sp|Y3501_METJA|UNCHARACTERIZED protein MJECL01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HFKSKHP 8
H KS HP
Sbjct: 181 HIKSLHP 187


>sp|HOSA_SULAC|HOMOCITRATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HFKSKHPT 9
H K+KH T
Sbjct: 112 HLKAKHHT 119


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 2 HFKSKHPTC 10
+F S HP C
Sbjct: 478 YFISAHPGC 486




83|Sequence|411|420|KHPTCPNKTM

>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 2 HPTCPN 7
HP CP+
Sbjct: 220 HPYCPS 225


>sp|FUMC_METAC|FUMARATE hydratase class II|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 137 KHPVHPN 143


>sp|MSRA_METMP|PEPTIDE methionine sulfoxide reductase MsrA|Methanococcus maripaludis

Query: 2 HPTCPNK 8
+PT PNK
Sbjct: 81 NPTTPNK 87


>sp|APGM_AERPE|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PTCPNKTM 10
PT P KT+
Sbjct: 15 PTSPRKTL 22


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 2 HPTCPN 7
HP CP+
Sbjct: 220 HPYCPS 225


>sp|PPAC_METTP|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanothrix thermoacetophila (strain DSM

Query: 1 KHPTCPNK 8
K PTC +K
Sbjct: 154 KSPTCTDK 161


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 KHPTCPN 7
KHP PN
Sbjct: 3 KHPWLPN 9


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 HPTCPNKT 9
HP PN T
Sbjct: 4 HPWIPNST 11


>sp|NADA_METKA|QUINOLINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 HPTCP 6
HP CP
Sbjct: 184 HPECP 188




84|Sequence|416|425|PNKTMDVSKV

>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PNKTMDVSK 9
P KTM++SK
Sbjct: 137 PGKTMNISK 145


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 PNKTMDVSKV 10
PN TMD+ ++
Sbjct: 282 PNVTMDIHRI 291


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PNKTMDVSK 9
P KT+D+++
Sbjct: 299 PKKTLDIAQ 307


>sp|COBD_METTP|PROBABLE cobalamin biosynthesis protein CobD|Methanothrix thermoacetophila

Query: 1 PNKTMDVSK 9
P K+MD+ K
Sbjct: 233 PRKSMDILK 241


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PNKTMDVSK 9
P KT+D+++
Sbjct: 299 PKKTLDIAQ 307




85|Sequence|421|430|DVSKVKLKKT

***** No hits found ******


86|Sequence|426|435|KLKKTKKREA

***** No hits found ******


87|Sequence|431|440|KKREADLPDN

>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 5 ADLPDN 10
ADLPDN
Sbjct: 14 ADLPDN 19


>sp|SYA_METBU|ALANINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 EADLPDN 10
E DLPDN
Sbjct: 473 EVDLPDN 479


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 2 KREADLPD 9
+RE D+PD
Sbjct: 356 ERECDVPD 363


>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 1 KKREADLPD 9
++RE ++PD
Sbjct: 649 RRREGEVPD 657


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 3 READLP 8
READLP
Sbjct: 306 READLP 311


>sp|Y2097_ARCFU|PUTATIVE nickel insertion protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KREADLPD 9
KRE D+P+
Sbjct: 220 KRETDVPN 227


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KKREADL 7
KKR+ADL
Sbjct: 361 KKRDADL 367


>sp|AROD_ARCFU|3-DEHYDROQUINATE dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EADLPDN 10
E+DLPD+
Sbjct: 79 ESDLPDS 85


>sp|RNH2_METKA|RIBONUCLEASE HII|Methanopyrus kandleri (strain AV19 /

Query: 2 KREADLPDN 10
+RE DLP+
Sbjct: 110 RRELDLPEG 118




88|Sequence|436|445|DLPDNITNEK

>sp|RPO1C_THEON|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus onnurineus (strain NA1)

Query: 1 DLPDNITNE 9
DLPDNI E
Sbjct: 15 DLPDNIKEE 23


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 1 DLPDNITNE 9
+LPDNI E
Sbjct: 15 ELPDNIKEE 23


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain

Query: 1 DLPDNITNE 9
+LPDNI E
Sbjct: 15 ELPDNIKEE 23


>sp|RL13_THEVO|LARGE ribosomal subunit protein uL13|Thermoplasma volcanium (strain ATCC

Query: 1 DLPDNITNEK 10
+LP N+++EK
Sbjct: 99 NLPKNVSSEK 108


>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain

Query: 1 DLPDNITNE 9
+LPDNI E
Sbjct: 15 ELPDNIKEE 23


>sp|RL6_STAMF|LARGE ribosomal subunit protein uL6|Staphylothermus marinus (strain

Query: 1 DLPDNITNE 9
D+P+N+T E
Sbjct: 12 DIPENVTVE 20


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 DLPDNITNE 9
DLPDN ++
Sbjct: 474 DLPDNFYSQ 482


>sp|NTPTH_METAC|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DLPDNITN 8
+LP+ ITN
Sbjct: 161 ELPEKITN 168


>sp|Y995_META3|UPF0288 protein Maeo_0995|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LPDNITNEK 10
LP+NI NE+
Sbjct: 423 LPENIPNEE 431


>sp|DHEB_HALSI|GLUTAMATE dehydrogenase B|Halobacterium salinarum (Halobacterium halobium)

Query: 1 DLPDNITNEK 10
D P+ +TNE+
Sbjct: 285 DAPNTLTNEE 294


>sp|DHEB_HALSA|GLUTAMATE dehydrogenase B|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLPDNITNEK 10
D P+ +TNE+
Sbjct: 285 DAPNTLTNEE 294


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 DLPDNITNEK 10
+LP+NI N +
Sbjct: 932 ELPENIVNAQ 941


>sp|SYI_META3|ISOLEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DLPDNIT 7
D+PDNI
Sbjct: 931 DIPDNIV 937


>sp|Y2028_ARCFU|UNCHARACTERIZED protein AF_2028|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DLPDNITNE 9
D+P +TNE
Sbjct: 111 DVPSKLTNE 119


>sp|THPR_METJA|RNA 2',3'-cyclic phosphodiesterase|Methanocaldococcus jannaschii

Query: 1 DLPDNITNE 9
D+P+NI E
Sbjct: 8 DIPENIKEE 16




89|Sequence|441|450|ITNEKTEIEQ

>sp|FLAD_METJA|PUTATIVE flagella-related protein D|Methanocaldococcus jannaschii (strain

Query: 2 TNEKTEIE 9
TNEK EIE
Sbjct: 117 TNEKIEIE 124




90|Sequence|446|455|TEIEQTKIKG

>sp|RS24_SULTO|SMALL ribosomal subunit protein eS24|Sulfurisphaera tokodaii (strain

Query: 1 TEIEQTKIK 9
+E++QTKIK
Sbjct: 2 SEVQQTKIK 10


>sp|MTMC1_METAC|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EIEQTKIKG 10
E+E+TK++G
Sbjct: 82 ELEKTKVEG 90


>sp|MTMC2_METMA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EIEQTKIKG 10
E+E+TK++G
Sbjct: 82 ELEKTKVEG 90


>sp|MTMC1_METMA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EIEQTKIKG 10
E+E+TK++G
Sbjct: 82 ELEKTKVEG 90




91|Sequence|451|460|TKIKGDVAGK

>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KIKGDVAGK 10
+IKG++AGK
Sbjct: 609 RIKGEIAGK 617


>sp|ARNR1_SULAC|HTH-TYPE transcriptional activator ArnR1|Sulfolobus acidocaldarius (strain

Query: 1 TKIKGDVAG 9
TK+KGD+ G
Sbjct: 70 TKVKGDIYG 78


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 TKIKGDVAGK 10
TKI+GD+ G+
Sbjct: 241 TKIQGDITGR 250


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KIKGDVAGK 10
+I+G++AGK
Sbjct: 609 RIRGEIAGK 617


>sp|PYRE_METHJ|OROTATE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 3 IKGDVAGK 10
I GDVAGK
Sbjct: 100 IIGDVAGK 107


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 2 KIKGDVAGK 10
+++GDV+G+
Sbjct: 299 RMRGDVSGR 307


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KIKGDVA 8
KI+GDVA
Sbjct: 483 KIEGDVA 489


>sp|AROA_METST|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 TKIKGDVAGK 10
T IKGDV+ +
Sbjct: 160 TDIKGDVSSQ 169


>sp|SPSS_METKA|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 TKIKGDVAGK 10
+ ++GDV+G+
Sbjct: 242 SSLRGDVSGR 251


>sp|RL18A_METM7|LARGE ribosomal subunit protein eL20|Methanococcus maripaludis (strain

Query: 2 KIKGDVAGK 10
+IKG++ GK
Sbjct: 6 RIKGEILGK 14




92|Sequence|456|465|DVAGKKNEKS

>sp|GATD_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanobrevibacter smithii (strain ATCC

Query: 1 DVAGKKNEKS 10
++AG+ NEKS
Sbjct: 420 NIAGEFNEKS 429




93|Sequence|461|470|KNEKSVKAEK

***** No hits found ******


94|Sequence|466|475|VKAEKRDVSK

>sp|Y2058_ARCFU|UNCHARACTERIZED protein AF_2058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AEKRDVSK 10
AEKR VSK
Sbjct: 282 AEKRRVSK 289


>sp|CBIC_METTH|COBALT-PRECORRIN-8 methylmutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 AEKRDVSK 10
AEKRD+++
Sbjct: 103 AEKRDITR 110




95|Sequence|471|480|RDVSKEKKPS

>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 DVSKEKKP 9
DV+ EKKP
Sbjct: 231 DVTLEKKP 238


>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RDVSKEKKP 9
+ VSKEK+P
Sbjct: 118 KGVSKEKRP 126


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RDVSKEKKP 9
R V +EKKP
Sbjct: 473 RHVKREKKP 481


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DVSKEKKPS 10
D++KEK PS
Sbjct: 240 DLAKEKAPS 248


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 3 VSKEKKP 9
++KEKKP
Sbjct: 110 ITKEKKP 116




96|Sequence|476|485|EKKPSNNVSV

>sp|CHEB_NATPD|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Natronomonas pharaonis

Query: 2 KKPSNNVSV 10
KKPS VSV
Sbjct: 107 KKPSGEVSV 115


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKKPSN 6
EKKPSN
Sbjct: 202 EKKPSN 207




97|Sequence|481|490|NNVSVIQVTT

>sp|Y1845_ARCFU|UNCHARACTERIZED protein AF_1845|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NNVSVIQVTT 10
N +SV+Q+TT
Sbjct: 87 NEMSVVQMTT 96




98|Sequence|486|495|IQVTTRTRKS

>sp|CETZ5_HALVD|TUBULIN-LIKE protein CetZ5|Haloferax volcanii (strain ATCC 29605

Query: 2 QVTTRTRKS 10
++TT+TRK+
Sbjct: 268 RITTQTRKA 276


>sp|CMR6_SACS2|CRISPR system CMR subunit Cmr6|Saccharolobus solfataricus (strain ATCC

Query: 2 QVTTRTR 8
++TTRTR
Sbjct: 118 EITTRTR 124




99|Sequence|491|500|RTRKSVTEVK

>sp|RL13_METMP|LARGE ribosomal subunit protein uL13|Methanococcus maripaludis (strain

Query: 1 RTRKSVTEVK 10
RTRKS++ K
Sbjct: 53 RTRKSISNPK 62




100|Sequence|496|505|VTEVKEMDVH

>sp|KDPB_THEVO|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma volcanium (strain ATCC

Query: 1 VTEVKEMDV 9
++E+K MD+
Sbjct: 443 ISEIKNMDI 451


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 VTEVKEMDVH 10
V E+KE+DV+
Sbjct: 855 VEELKELDVN 864


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VTEVKEMDVH 10
VT +KEMDV
Sbjct: 64 VTILKEMDVE 73


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 5 KEMDVH 10
KE+DVH
Sbjct: 118 KELDVH 123


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTEVKEMDVH 10
VT +KEMDV
Sbjct: 66 VTILKEMDVE 75


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 TEVKEMDVH 10
T+ KE+D H
Sbjct: 15 TQAKELDKH 23




101|Sequence|501|510|EMDVHTGSNS

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 MDVHTGSN 9
MD+H G N
Sbjct: 42 MDIHRGRN 49


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EMDVHTGSNS 10
EMDV TG+ S
Sbjct: 310 EMDVPTGTQS 319


>sp|RGYRB_NANEQ|REVERSE gyrse subunit B|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 MDVHTGSNS 10
+D+H GS+S
Sbjct: 567 IDLHPGSSS 575


>sp|SYFB_METTP|PHENYLALANINE--TRNA ligase beta subunit|Methanothrix thermoacetophila (strain DSM

Query: 1 EMDVHTGS 8
E VHTGS
Sbjct: 75 EYQVHTGS 82


>sp|SYC_METAC|CYSTEINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MDVHTG 7
+D+HTG
Sbjct: 225 LDIHTG 230


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 3 DVHTGSN 9
DVH G+N
Sbjct: 366 DVHPGAN 372


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EMDVHTGS 8
+ +VHTGS
Sbjct: 1341 QFNVHTGS 1348




102|Sequence|506|515|TGSNSEKFSK

>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC

Query: 1 TGSNSEKFSK 10
TG N++K+SK
Sbjct: 34 TGKNTKKYSK 43


>sp|AAT_PYRHO|ASPARTATE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TGSNSEKFSK 10
TG +SEKFS+
Sbjct: 332 TGMSSEKFSE 341


>sp|METK_PYRFU|S-ADENOSYLMETHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 NSEKFSK 10
NSEKF K
Sbjct: 184 NSEKFKK 190


>sp|METK_PYRHO|S-ADENOSYLMETHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 NSEKFSK 10
NSEKF K
Sbjct: 184 NSEKFKK 190




103|Sequence|511|520|EKFSKTKKSK

>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EKFSKTK 7
EKFSK+K
Sbjct: 324 EKFSKSK 330




104|Sequence|516|525|TKKSKRKLEV

>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 1 TKKSKRKLEV 10
TKKS+RK+++
Sbjct: 11 TKKSERKIKI 20


>sp|IF6_HYPBU|TRANSLATION initiation factor 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 TKKSKRKLE 9
T+K K+K+E
Sbjct: 31 TEKDKKKIE 39




105|Sequence|521|530|RKLEVDSHSL

>sp|HIS7_METPE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 LEVDSH 8
LEVDSH
Sbjct: 61 LEVDSH 66


>sp|RRP4_PYRAE|EXOSOME complex component Rrp4|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RKLEVDSHSL 10
RK+E +SH +
Sbjct: 204 RKIEAESHVM 213


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5 /

Query: 1 RKLEVDSHSL 10
RKL D+HS+
Sbjct: 178 RKLREDNHSI 187


>sp|RS13_PYRIL|SMALL ribosomal subunit protein uS13|Pyrobaculum islandicum (strain DSM

Query: 1 RKLEVDSHSL 10
RKL +D H++
Sbjct: 42 RKLGIDPHAI 51




106|Sequence|526|535|DSHSLHGPVN

>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DSHSLHGPV 9
D H ++GPV
Sbjct: 144 DPHDINGPV 152


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 DSHSLHGPV 9
DSH HGPV
Sbjct: 82 DSHPDHGPV 90


>sp|NIFE_METTH|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 SHSLHGPV 9
+H +HGPV
Sbjct: 80 AHIVHGPV 87


>sp|NIFE_METTM|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanothermobacter

Query: 2 SHSLHGPV 9
+H +HGPV
Sbjct: 83 AHLVHGPV 90


>sp|PURP2_METMA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase 2|Methanosarcina mazei (strain ATCC

Query: 1 DSHSLHGPV 9
D H + GPV
Sbjct: 144 DPHDIKGPV 152


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 HGPVN 10
HGPVN
Sbjct: 399 HGPVN 403


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 6 HGPVN 10
HGP+N
Sbjct: 176 HGPIN 180


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 1 DSHSLH 6
D HSLH
Sbjct: 70 DEHSLH 75


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 DSHSLHGPV 9
D LHGP+
Sbjct: 472 DIRDLHGPL 480


>sp|HEMH_THEVO|FERROCHELATASE volcanium (strain ATCC 51530

Query: 1 DSHSLHGPVN 10
D+HSL P N
Sbjct: 167 DAHSLPHPEN 176


>sp|NADM_HALMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DSHSLHGP 8
DSH+ H P
Sbjct: 39 DSHTTHDP 46




107|Sequence|531|540|HGPVNDEESS

>sp|GLPK_THEON|GLYCEROL kinase|Thermococcus onnurineus (strain NA1)

Query: 2 GPVNDEES 9
GPV DEE+
Sbjct: 462 GPVMDEET 469


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 2 GPVNDEESS 10
GPVND +S
Sbjct: 278 GPVNDLSAS 286


>sp|PUS10_CALMQ|TRNA pseudouridine synthase Pus10|Caldivirga maquilingensis (strain ATCC

Query: 1 HGPVNDEE 8
HG V DE+
Sbjct: 310 HGSVTDEQ 317


>sp|GSA_HALMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PVNDEESS 10
P NDEE++
Sbjct: 177 PFNDEEAA 184


>sp|HUTI_PICTO|IMIDAZOLONEPROPIONASE torridus (strain ATCC 700027

Query: 1 HGPVNDEESS 10
H +ND ESS
Sbjct: 94 HKTMNDTESS 103


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 HGPVNDEESS 10
HG + D ES+
Sbjct: 189 HGVITDHEST 198




108|Sequence|536|545|DEESSTKKKK

***** No hits found ******


109|Sequence|541|550|TKKKKKVESK

***** No hits found ******


110|Sequence|546|555|KVESKSKNNS

***** No hits found ******


111|Sequence|551|560|SKNNSQEVPK

***** No hits found ******


112|Sequence|556|565|QEVPKGDSKV

>sp|AROK_METMA|SHIKIMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QEVPKGDSKV 10
+EVP+GD+++
Sbjct: 51 KEVPEGDTRL 60


>sp|AGLD_HALVD|GLYCOSYLTRANSFERASE AglD|Haloferax volcanii (strain ATCC 29605

Query: 4 PKGDSKV 10
PKGD+KV
Sbjct: 224 PKGDTKV 230


>sp|IF2P_METAR|PROBABLE translation initiation factor IF-2|Methanocella arvoryzae (strain

Query: 2 EVPKGDSKV 10
+VP+G SKV
Sbjct: 553 DVPEGHSKV 561


>sp|RFCS_THEPD|REPLICATION factor C small subunit|Thermofilum pendens (strain DSM 2475

Query: 1 QEVPKGDS 8
Q +PKGD+
Sbjct: 158 QPLPKGDA 165


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 2 EVPKGDS 8
E+P+GD+
Sbjct: 187 EIPRGDT 193




113|Sequence|561|570|GDSKVEENKK

>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 2 DSKVEENKK 10
DSK+EE KK
Sbjct: 45 DSKIEEVKK 53


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DSKVEENKK 10
DSK+EE KK
Sbjct: 45 DSKIEEVKK 53


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GDSKVEENKK 10
GD+ VE N+K
Sbjct: 146 GDNVVEPNEK 155


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 DSKVEENK 9
DSK+ ENK
Sbjct: 489 DSKIAENK 496




114|Sequence|566|575|EENKKQNTCM

>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 EENKKQNTCM 10
++ KQ+TCM
Sbjct: 331 KDENKQDTCM 340




115|Sequence|571|580|QNTCMKKSTK

>sp|MFNA_METM5|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 1 QNTCMK 6
Q+TCMK
Sbjct: 336 QDTCMK 341




116|Sequence|576|585|KKSTKKKTLK

***** No hits found ******


117|Sequence|581|590|KKTLKNKSSK

>sp|PUR7_METB6|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KKTLKNKSS 9
K TLKNK S
Sbjct: 40 KDTLKNKGS 48




118|Sequence|586|595|NKSSKKSSKP

>sp|MRE11_ARCFU|DNA double-strand break repair protein|Archaeoglobus fulgidus (strain

Query: 2 KSSKKSSKP 10
KS+KK+ KP
Sbjct: 423 KSTKKARKP 431




119|Sequence|591|600|KSSKPPQKEP

>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 2 SSKPPQKEP 10
+S+PP+K P
Sbjct: 711 ASEPPEKSP 719


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 KSSKPPQK 8
K SKPPQK
Sbjct: 343 KHSKPPQK 350




120|Sequence|596|605|PQKEPVEKGS

>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 PQKEPVEKG 9
PQ E VEKG
Sbjct: 27 PQAEAVEKG 35


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PQKEPVEKG 9
PQ E VEKG
Sbjct: 27 PQAEAVEKG 35


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PQKEPVEKG 9
PQ E VEKG
Sbjct: 27 PQAEAVEKG 35


Query: 4 EPVEKGS 10
EP+EKGS
Sbjct: 714 EPLEKGS 720


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 PQKEPVEKG 9
PQ E V+KG
Sbjct: 34 PQTEAVKKG 42


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PQKEPVEKG 9
PQ E V+KG
Sbjct: 27 PQTEAVKKG 35


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 PQKEPVEKG 9
PQ E VE+G
Sbjct: 28 PQAEAVERG 36


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 PQKEPVEKG 9
PQ E VE+G
Sbjct: 28 PQAEAVERG 36


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PQKEPVEKG 9
PQ E V+KG
Sbjct: 30 PQTEAVKKG 38


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 PQKEPVEKG 9
PQ E V+KG
Sbjct: 34 PQTEAVKKG 42


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 3 KEPVEKG 9
KEP+EKG
Sbjct: 81 KEPLEKG 87


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii

Query: 3 KEPVEKG 9
KEP+EKG
Sbjct: 81 KEPLEKG 87


>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KEPVEKG 9
K PVEKG
Sbjct: 186 KVPVEKG 192


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PQKEPVEKG 9
PQK+ +E+G
Sbjct: 19 PQKKALERG 27


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 4 EPVEKG 9
EP+EKG
Sbjct: 684 EPIEKG 689


>sp|RFCL_METHJ|REPLICATION factor C large subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PQKEPVEK 8
P EPVEK
Sbjct: 464 PSTEPVEK 471


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PQKEPVEKG 9
PQ E + KG
Sbjct: 30 PQSEAIRKG 38


>sp|HELS_METVS|ATP-DEPENDENT DNA helicase Hel308|Methanococcus vannielii (strain ATCC 35089

Query: 1 PQKEPVEKG 9
PQK+ +E+G
Sbjct: 19 PQKKVIEEG 27


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 4 EPVEKG 9
EP+EKG
Sbjct: 689 EPIEKG 694


>sp|MOAC_PYRAE|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrobaculum aerophilum

Query: 3 KEPVEKG 9
K PVEKG
Sbjct: 143 KNPVEKG 149




121|Sequence|601|610|VEKGSAQMDP

>sp|PFDA_METM5|PREFOLDIN subunit alpha|Methanococcus maripaludis (strain C5 /

Query: 1 VEKGSAQMDP 10
+E+ SAQM P
Sbjct: 132 IEQRSAQMKP 141


>sp|PFDA_METMP|PREFOLDIN subunit alpha|Methanococcus maripaludis (strain DSM 14266

Query: 1 VEKGSAQMDP 10
+E+ SAQM P
Sbjct: 132 IEQRSAQMKP 141


>sp|RL10_METJA|LARGE ribosomal subunit protein uL10|Methanocaldococcus jannaschii

Query: 1 VEKGSAQMDP 10
VEKGS M P
Sbjct: 128 VEKGSTGMPP 137


>sp|DCD_HYPBU|DCTP deaminase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VEKGSAQMDP 10
+EKG ++DP
Sbjct: 12 IEKGLLRIDP 21


>sp|MTBC1_METAC|DIMETHYLAMINE corrinoid protein 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VEKGSAQMDP 10
VEK ++DP
Sbjct: 26 VEKAKGELDP 35




122|Sequence|606|615|AQMDPPQMGP

>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QMDPPQMGP 10
Q+DP Q+ P
Sbjct: 4 QIDPQQIDP 12


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 2 QMDPP 6
QMDPP
Sbjct: 220 QMDPP 224


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 2 QMDPPQM 8
+MDPP++
Sbjct: 42 KMDPPEL 48




123|Sequence|611|620|PQMGPAPTEA

>sp|RL10_PYRAE|LARGE ribosomal subunit protein uL10|Pyrobaculum aerophilum (strain ATCC

Query: 1 PQMGPAPTEA 10
PQ P PTEA
Sbjct: 310 PQQTPQPTEA 319


>sp|PFDA_META3|PREFOLDIN subunit alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 QMGPAPT 8
QMG APT
Sbjct: 135 QMGGAPT 141


>sp|PTH_SULTO|PEPTIDYL-TRNA hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 MGPAPTE 9
+GPAP E
Sbjct: 103 IGPAPVE 109


>sp|RL11_HALVD|LARGE ribosomal subunit protein uL11|Haloferax volcanii (strain ATCC

Query: 1 PQMGPAPTEA 10
P++GP P +
Sbjct: 22 PELGPTPVDV 31


>sp|RL11_HALWD|LARGE ribosomal subunit protein uL11|Haloquadratum walsbyi (strain DSM

Query: 1 PQMGPAPTEA 10
P++GP P +
Sbjct: 22 PELGPTPVDV 31




124|Sequence|616|625|APTEAVQKGP

>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 TEAVQKG 9
TEAV+KG
Sbjct: 32 TEAVKKG 38


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 3 TEAVQKG 9
TEAV+KG
Sbjct: 36 TEAVKKG 42


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TEAVQKG 9
TEAV+KG
Sbjct: 29 TEAVKKG 35


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 TEAVQKG 9
TEAV+KG
Sbjct: 36 TEAVKKG 42


>sp|Y2215_HALMD|PUTATIVE lipoprotein Hmuk_2215|Halomicrobium mukohataei (strain ATCC 700874

Query: 3 TEAVQKGP 10
T AVQ+GP
Sbjct: 183 TRAVQQGP 190


>sp|VHUB_METVO|POLYFERREDOXIN protein VhuB|Methanococcus voltae

Query: 1 APTEAVQKGP 10
PTEA++ P
Sbjct: 21 CPTEAIEIAP 30




125|Sequence|621|630|VQKGPVQVEP

>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VQKGPVQV 8
VQKGP+ V
Sbjct: 816 VQKGPIGV 823


>sp|Y1253_SACS2|PUTATIVE esterase SSO1253|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VQKGPVQVEP 10
+++GP VEP
Sbjct: 96 MKEGPFTVEP 105


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 QKGPVQVEP 10
Q GP +VEP
Sbjct: 313 QAGPPRVEP 321


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 3 KGPVQVEP 10
+ PVQVEP
Sbjct: 338 RTPVQVEP 345


>sp|Y926_METJA|UNCHARACTERIZED protein MJ0926|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KGPVQVEP 10
K PV++EP
Sbjct: 55 KKPVKIEP 62


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 1 VQKGPVQVEP 10
VQKGP P
Sbjct: 125 VQKGPTSFPP 134


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 1 VQKGPVQVEP 10
VQKGP P
Sbjct: 125 VQKGPTSFPP 134


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 3 KGPVQV 8
KGPVQV
Sbjct: 495 KGPVQV 500


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 3 KGPVQV 8
KGPVQV
Sbjct: 495 KGPVQV 500


>sp|DCD_SULAC|DCTP deaminase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VQKGPVQVEP 10
++KG ++VEP
Sbjct: 12 LEKGWIKVEP 21




126|Sequence|626|635|VQVEPPPPME

>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QVEPPPP 8
QV PPPP
Sbjct: 925 QVNPPPP 931


>sp|Y2003_METTM|UNCHARACTERIZED protein MTBMA_p00030|Methanothermobacter marburgensis (strain ATCC

Query: 2 QVEPPPPME 10
+VEPPP +E
Sbjct: 106 RVEPPPLIE 114


>sp|TRUA_ARCFU|TRNA pseudouridine synthase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QVEPPPP 8
+VEP PP
Sbjct: 207 RVEPAPP 213


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 3 VEPPPPM 9
VEPP P+
Sbjct: 108 VEPPQPI 114


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 3 VEPPPPME 10
+EPP P++
Sbjct: 108 IEPPEPIQ 115


>sp|CAS2B_PYRAE|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VQVEPPPP 8
+++ PPPP
Sbjct: 76 IRIGPPPP 83


>sp|RIFK_AERPE|RIBOFLAVIN kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VQVEPPP 7
V++EPPP
Sbjct: 62 VRIEPPP 68


>sp|RF1_METJA|PEPTIDE chain release factor subunit|Methanocaldococcus jannaschii (strain

Query: 3 VEPPPPME 10
+EPP P++
Sbjct: 110 IEPPEPIK 117


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 EPPPP 8
EPPPP
Sbjct: 18 EPPPP 22


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 QVEPPPP 8
QV+ PPP
Sbjct: 196 QVDEPPP 202


>sp|TRMY_HALVD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloferax volcanii

Query: 1 VQVEPP 6
VQVEPP
Sbjct: 136 VQVEPP 141


>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 2 QVEPPPP 8
+VEP PP
Sbjct: 165 EVEPVPP 171


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 EPPPPM 9
EPP PM
Sbjct: 292 EPPTPM 297




127|Sequence|631|640|PPPMEHAQME

>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 1 PPPMEHAQME 10
P P++ AQ+E
Sbjct: 344 PVPIQKAQLE 353


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 PMEHAQME 10
P EH QM+
Sbjct: 272 PTEHLQMD 279


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 PMEHAQME 10
P EH QM+
Sbjct: 272 PTEHLQMD 279




128|Sequence|636|645|HAQMEGAQIR

>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QMEGAQIR 10
QM+G QIR
Sbjct: 700 QMDGFQIR 707


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AQMEGAQIR 10
A +EG Q+R
Sbjct: 52 AMLEGGQVR 60


>sp|EF1B_ARCFU|ELONGATION factor 1-beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QMEGAQIR 10
QMEG +IR
Sbjct: 30 QMEGVEIR 37


>sp|HAC8_HALAS|PRE-PROTEIN-C8 sp. (strain AS7092)

Query: 2 AQMEGAQIR 10
A+ +GAQIR
Sbjct: 77 ARADGAQIR 85




129|Sequence|641|650|GAQIRPAPDE

>sp|TRPB2_SULTO|TRYPTOPHAN synthase beta chain 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AQIRPAPDE 10
AQ+ P+P E
Sbjct: 178 AQVHPSPSE 186


>sp|RFCS_THEAC|REPLICATION factor C small subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 QIRPAPDE 10
+ RP PDE
Sbjct: 155 RFRPVPDE 162


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 GAQIRPA 7
GA+IRPA
Sbjct: 261 GAEIRPA 267


>sp|TRPB2_PYRAB|TRYPTOPHAN synthase beta chain 2|Pyrococcus abyssi (strain GE5 /

Query: 1 GAQIRPAPDE 10
GA++ P+P E
Sbjct: 176 GAEVFPSPSE 185


>sp|KAE1_PYRAR|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum arsenaticum

Query: 1 GAQIRPAPDE 10
GA+++ PDE
Sbjct: 273 GAEVKVVPDE 282


>sp|TRPB2_PYRFU|TRYPTOPHAN synthase beta chain 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAQIRPAPDE 10
GA++ P+P E
Sbjct: 176 GAEVFPSPSE 185


>sp|TRPB2_SACS2|TRYPTOPHAN synthase beta chain 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GAQIRPAPDE 10
GA++ P+P +
Sbjct: 177 GAEVHPSPSD 186


>sp|TRPB_THEON|TRYPTOPHAN synthase beta chain|Thermococcus onnurineus (strain NA1)

Query: 1 GAQIRPAPDE 10
GA+I P+P +
Sbjct: 176 GAEIYPSPSD 185


>sp|TRPB_THEGJ|TRYPTOPHAN synthase beta chain|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GAQIRPAPDE 10
GA+I P+P +
Sbjct: 176 GAEIYPSPSD 185


>sp|TRPB_PYRHO|TRYPTOPHAN synthase beta chain|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GAQIRPAPDE 10
GA++ P+P E
Sbjct: 187 GAEVFPSPSE 196


>sp|TRPB2_THEKO|TRYPTOPHAN synthase beta chain 2|Thermococcus kodakarensis (strain ATCC

Query: 1 GAQIRPAPDE 10
GA+I P+P +
Sbjct: 176 GAEIYPSPSD 185


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 RPAPDE 10
RP+PDE
Sbjct: 226 RPSPDE 231


>sp|KAE1_PYRCJ|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum calidifontis

Query: 1 GAQIRPAPDE 10
GA+++ PDE
Sbjct: 280 GAEVKFVPDE 289




130|Sequence|646|655|PAPDEPVQME

>sp|IF2P_NATPD|PROBABLE translation initiation factor IF-2|Natronomonas pharaonis (strain

Query: 1 PAPDEPVQ 8
P PDEPVQ
Sbjct: 150 PNPDEPVQ 157


>sp|ASST_METAC|L-ASPARTATE semialdehyde sulfurtransferase|Methanosarcina acetivorans (strain

Query: 2 APDEPVQM 9
AP+EPV +
Sbjct: 454 APNEPVDL 461


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 3 PDEPVQ 8
PDEP++
Sbjct: 445 PDEPIE 450


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PAPDEPVQ 8
P PD PV+
Sbjct: 220 PVPDYPVK 227


>sp|NCPP_METTH|PROBABLE inosine/xanthosine triphosphatase|Methanothermobacter

Query: 3 PDEPVQME 10
PD+PV +E
Sbjct: 46 PDQPVGLE 53


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 1 PAPDEP 6
P+PD+P
Sbjct: 195 PSPDDP 200


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 PAPDEPVQ 8
P PD PVQ
Sbjct: 148 PNPDAPVQ 155


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum (strain

Query: 1 PAPDEPVQ 8
P PD PVQ
Sbjct: 148 PNPDAPVQ 155


>sp|ACDG_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit gamma|Archaeoglobus fulgidus

Query: 1 PAPDEPV 7
P PD+PV
Sbjct: 353 PGPDDPV 359




131|Sequence|651|660|PVQMEVVQEG

>sp|APGM_METAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 PVQMEVVQEG 10
PV ++ VQEG
Sbjct: 198 PVNLKRVQEG 207


>sp|NCPP_METJA|PROBABLE inosine/xanthosine triphosphatase|Methanocaldococcus jannaschii

Query: 1 PVQMEVVQEG 10
PV++E V+EG
Sbjct: 16 PVKIEAVKEG 25


>sp|CCA_HALMA|CCA-ADDING enzyme|Haloarcula marismortui (strain ATCC 43049

Query: 1 PVQMEVVQEG 10
PV+ EVVQ G
Sbjct: 45 PVEAEVVQVG 54


>sp|RL40_SULTO|LARGE ribosomal subunit protein eL40|Sulfurisphaera tokodaii (strain

Query: 1 PVQMEVVQE 9
PV++++VQ+
Sbjct: 6 PVKLQIVQQ 14




132|Sequence|656|665|VVQEGPAQKE

>sp|MTD_METAC|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 VVQEGPAQKE 10
VV +GP +KE
Sbjct: 90 VVSDGPTKKE 99


>sp|MTD_METMA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosarcina

Query: 1 VVQEGPAQKE 10
+V +GP +KE
Sbjct: 90 IVSDGPTKKE 99




133|Sequence|661|670|PAQKELLPPV

>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 2 AQKELLPP 9
A KE++PP
Sbjct: 564 ALKEMIPP 571


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium pump|Methanosarcina

Query: 2 AQKELLPP 9
A KE++PP
Sbjct: 564 ALKEMIPP 571


>sp|SRP19_IGNH4|SIGNAL recognition particle 19 kDa|Ignicoccus hospitalis (strain KIN4/I

Query: 1 PAQKELL 7
P+QKELL
Sbjct: 39 PSQKELL 45




134|Sequence|666|675|LLPPVEPAQM

>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 4 PVEPAQM 10
P+EPAQ+
Sbjct: 776 PLEPAQL 782


>sp|Y1455_METJA|UNCHARACTERIZED protein MJ1455|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPVEP 7
PPVEP
Sbjct: 228 PPVEP 232


>sp|RIBL_PYRHO|FAD synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPVEPAQ 9
PP+ PA+
Sbjct: 53 PPINPAE 59


>sp|RIBL_PYRAB|FAD synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 PPVEPAQ 9
PP+ PA+
Sbjct: 53 PPINPAE 59


>sp|AATA_PYRNV|A-TYPE ATP synthase subunit A|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LPPVEP 7
LPPVEP
Sbjct: 207 LPPVEP 212


>sp|AATA_PYRAR|A-TYPE ATP synthase subunit A|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 LPPVEP 7
LPPVEP
Sbjct: 207 LPPVEP 212


>sp|AATA_PYRCJ|A-TYPE ATP synthase subunit A|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LPPVEP 7
LPPVEP
Sbjct: 207 LPPVEP 212


>sp|RIBL_PYRFU|FAD synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPVEPAQ 9
PP+ PA+
Sbjct: 53 PPINPAE 59


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LPPVEP 7
LPPVEP
Sbjct: 207 LPPVEP 212


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LPPVEP 7
LPPVEP
Sbjct: 207 LPPVEP 212




135|Sequence|671|680|EPAQMVGAQI

>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EPAQMVGAQI 10
EP Q++G Q+
Sbjct: 629 EPEQLIGKQV 638


>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EPAQMVGAQI 10
+P QM+G I
Sbjct: 431 DPEQMIGVNI 440


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PAQMVGAQI 10
PA M+ AQI
Sbjct: 158 PANMLAAQI 166




136|Sequence|676|685|VGAQIVLAHM

>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 2 GAQIVLAHM 10
G Q+V HM
Sbjct: 201 GCQVVAVHM 209




137|Sequence|681|690|VLAHMELPPP

>sp|AATB_PYRNV|A-TYPE ATP synthase subunit B|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 HMELPPP 10
HM LPPP
Sbjct: 102 HMPLPPP 108


>sp|AATB_PYRAR|A-TYPE ATP synthase subunit B|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 HMELPPP 10
HM LPPP
Sbjct: 102 HMPLPPP 108


>sp|AATB_PYRCJ|A-TYPE ATP synthase subunit B|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 HMELPPP 10
HM LPPP
Sbjct: 102 HMPLPPP 108


>sp|AATB_PYRIL|A-TYPE ATP synthase subunit B|Pyrobaculum islandicum (strain DSM 4184

Query: 4 HMELPPP 10
HM LPPP
Sbjct: 102 HMPLPPP 108


>sp|AATB_PYRAE|A-TYPE ATP synthase subunit B|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 HMELPPP 10
HM LPPP
Sbjct: 102 HMPLPPP 108


>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLAHMELPPP 10
+LAHM P P
Sbjct: 398 ILAHMGFPVP 407


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 1 VLAHMELPP 9
VL H E+PP
Sbjct: 464 VLKHHEVPP 472


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 4 HMELPP 9
H+ELPP
Sbjct: 152 HVELPP 157


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 VLAHMELPP 9
V H+ELPP
Sbjct: 538 VARHIELPP 546




138|Sequence|686|695|ELPPPMETAQ

>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPPMET 8
PPP+ET
Sbjct: 213 PPPIET 218




139|Sequence|691|700|METAQTEVAQ

>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 METAQTEVAQ 10
+ETAQT AQ
Sbjct: 350 LETAQTTSAQ 359




140|Sequence|696|705|TEVAQMGPAP

>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 EVAQMGPAP 10
E+ MGP P
Sbjct: 38 ELGHMGPTP 46




141|Sequence|701|710|MGPAPMEPAQ

>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 MGPAPMEP 8
MGP PM P
Sbjct: 215 MGPTPMVP 222


>sp|DNLI_THEAC|DNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MGPAPMEP 8
+GP PM P
Sbjct: 215 LGPTPMIP 222


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 5 PMEPAQ 10
P+EPAQ
Sbjct: 776 PLEPAQ 781


>sp|PTH_SULTO|PEPTIDYL-TRNA hydrolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MGPAPME 7
+GPAP+E
Sbjct: 103 IGPAPVE 109


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 MGPAPM 6
MGP PM
Sbjct: 43 MGPTPM 48




142|Sequence|706|715|MEPAQMEVAQ

>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 EPAQMEVAQ 10
EPA +E+A+
Sbjct: 77 EPAALEIAK 85


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MEPAQMEVAQ 10
MEP+ +EVA+
Sbjct: 1058 MEPSVVEVAK 1067


>sp|DP2L_METM6|DNA polymerase II large subunit|Methanococcus maripaludis (strain C6

Query: 2 EPAQMEVAQ 10
EPA +E+A+
Sbjct: 77 EPAALEIAK 85


>sp|DP2L_METM5|DNA polymerase II large subunit|Methanococcus maripaludis (strain C5

Query: 2 EPAQMEVAQ 10
EPA +E+A+
Sbjct: 77 EPAALEIAK 85


>sp|DP2L_METM7|DNA polymerase II large subunit|Methanococcus maripaludis (strain C7

Query: 2 EPAQMEVAQ 10
EPA +E+A+
Sbjct: 77 EPAALEIAK 85


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 2 EPAQMEVAQ 10
EPA +E+A+
Sbjct: 77 EPAALEIAK 85


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 EPAQMEVAQ 10
EPA +E+A+
Sbjct: 80 EPAALEIAK 88




143|Sequence|711|720|MEVAQVESAP

>sp|Y367_PYRAB|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus abyssi

Query: 1 MEVAQVESAP 10
MEV +V++AP
Sbjct: 219 MEVVKVKTAP 228




144|Sequence|716|725|VESAPMQVVQ

***** No hits found ******


145|Sequence|721|730|MQVVQKEPVQ

***** No hits found ******


146|Sequence|726|735|KEPVQMELSP

>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 2 EPVQMELSP 10
+PV +ELSP
Sbjct: 423 QPVTVELSP 431




147|Sequence|731|740|MELSPPMEVV

>sp|AROK_METAC|SHIKIMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 ELSPPMEVV 10
E+ PP+E+V
Sbjct: 112 EILPPLEIV 120


>sp|Y888_METJA|PROBABLE metallo-hydrolase MJ0888|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ELSPPMEVV 10
+L+PP E++
Sbjct: 100 KLNPPKEII 108


>sp|HPRT_ACIB4|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Aciduliprofundum boonei (strain DSM

Query: 1 MELSPPMEVV 10
MEL+ PM V+
Sbjct: 73 MELTKPMTVI 82




148|Sequence|736|745|PMEVVQKEPV

>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 1 PMEVVQKEPV 10
P+E + K PV
Sbjct: 376 PLEFISKTPV 385


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 2 MEVVQKEP 9
+E+V+KEP
Sbjct: 1641 LEIVEKEP 1648


>sp|RLME_METHJ|RIBOSOMAL RNA large subunit methyltransferase|Methanospirillum hungatei

Query: 3 EVVQKEPV 10
E++QK PV
Sbjct: 29 EIIQKNPV 36


>sp|Y716_METJA|UNCHARACTERIZED protein MJ0716|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MEVVQKEPV 10
+E+V KEP+
Sbjct: 87 VEIVNKEPL 95


>sp|HPRT_ACIB4|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Aciduliprofundum boonei (strain DSM

Query: 1 PMEVVQKEP 9
PM V++K P
Sbjct: 78 PMTVIRKRP 86


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PMEVVQKE 8
P EVVQKE
Sbjct: 636 PEEVVQKE 643


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PMEVVQ 6
PMEVVQ
Sbjct: 243 PMEVVQ 248




149|Sequence|741|750|QKEPVQIELS

>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KEPVQIELS 10
K P++IEL+
Sbjct: 193 KHPIKIELT 201




150|Sequence|746|755|QIELSPPMEV

>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QIELSPPMEV 10
+IEL+ PM++
Sbjct: 197 KIELTKPMKI 206


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 IELSPPMEV 10
+ LSP MEV
Sbjct: 73 VSLSPAMEV 81




151|Sequence|751|760|PPMEVVQKEP

>sp|HTPX1_SACS2|PROTEASE HtpX homolog 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PPMEVVQKEP 10
PP++V +K+P
Sbjct: 261 PPVKVEEKDP 270


>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPMEVVQKE 9
PP+ + +KE
Sbjct: 436 PPLSITEKE 444


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 MEVVQKEP 10
+E+V+KEP
Sbjct: 1641 LEIVEKEP 1648


>sp|Y716_METJA|UNCHARACTERIZED protein MJ0716|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 MEVVQKEP 10
+E+V KEP
Sbjct: 87 VEIVNKEP 94


>sp|Y855_METJA|UNCHARACTERIZED protein MJ0855|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPMEVVQKE 9
PP+E ++KE
Sbjct: 63 PPLEELKKE 71


>sp|Y404_METJA|UNCHARACTERIZED protein MJ0404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPMEVVQKEP 10
PPM + +EP
Sbjct: 44 PPMNITDEEP 53


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PMEVVQKE 9
P EVVQKE
Sbjct: 636 PEEVVQKE 643


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 3 MEVVQKE 9
MEV+QKE
Sbjct: 459 MEVLQKE 465


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 MEVVQKE 9
MEV+QKE
Sbjct: 458 MEVLQKE 464




152|Sequence|756|765|VQKEPVKIEL

>sp|RGYR1_SULAC|REVERSE gyrase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VQKEPVKIEL 10
V+KE VKIEL
Sbjct: 1062 VRKEIVKIEL 1071


>sp|MVHB_METTM|POLYFERREDOXIN protein MvhB|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 KEPVKIEL 10
KEP K+EL
Sbjct: 128 KEPAKVEL 135


>sp|MVHB_METTH|POLYFERREDOXIN protein MvhB|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 KEPVKIEL 10
KEP K+EL
Sbjct: 128 KEPAKVEL 135


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 KEPVKIEL 10
K P+KIEL
Sbjct: 193 KHPIKIEL 200


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VQKEPVKIE 9
+QKEP+K E
Sbjct: 362 IQKEPLKWE 370


>sp|MVK_SACS2|MEVALONATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QKEPVKIEL 10
K+PVKIE+
Sbjct: 86 MKKPVKIEI 94




153|Sequence|761|770|VKIELSPPIE

>sp|Y593_PYRFU|UPF0282 protein PF0593|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KIELSPPI 9
KIE SPP+
Sbjct: 149 KIEFSPPV 156


>sp|RL1_HYPBU|LARGE ribosomal subunit protein uL1|Hyperthermus butylicus (strain DSM

Query: 1 VKIELSPPIE 10
VK+ + PP+E
Sbjct: 204 VKLTMGPPVE 213


>sp|PRIS_AERPE|DNA primase small subunit PriS|Aeropyrum pernix (strain ATCC 700893

Query: 5 LSPPIE 10
LSPP+E
Sbjct: 20 LSPPVE 25


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 1 VKIELSPPIE 10
V+IE PIE
Sbjct: 278 VRIEFKKPIE 287


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKIELSPPIE 10
V+IE PIE
Sbjct: 278 VRIEFKKPIE 287


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKIELSPPIE 10
V+IE PIE
Sbjct: 278 VRIEFKKPIE 287




154|Sequence|766|775|SPPIEVVQKE

>sp|BIOA_METJA|ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PPIEVVQKE 10
PP+ + +KE
Sbjct: 436 PPLSITEKE 444


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PPIEVVQK 9
PPIE+ +K
Sbjct: 56 PPIEIAEK 63


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 1 SPPIEVVQ 8
SPP+E+ +
Sbjct: 425 SPPVEITE 432




155|Sequence|771|780|VVQKEPVQME

>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VQKEPVQME 10
+QKEP++ E
Sbjct: 362 IQKEPLKWE 370




156|Sequence|776|785|PVQMELSPPM

>sp|AROE_HALWD|SHIKIMATE dehydrogenase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PVQMELSPPM 10
PV+ LSPPM
Sbjct: 10 PVEHSLSPPM 19


>sp|CCA_SACSH|CCA-ADDING enzyme|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACS2|CCA-ADDING enzyme|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACI7|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACI6|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.4 /

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACI4|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.14.25 /

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACI3|CCA-ADDING enzyme|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACI2|CCA-ADDING enzyme|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|CCA_SACI1|CCA-ADDING enzyme|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 PVQMELSPPM 10
P+++EL+ PM
Sbjct: 195 PIKIELTKPM 204


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 1 PVQMELSPPM 10
PV+ SPPM
Sbjct: 15 PVEHSFSPPM 24


>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 1 PVQMELSPPM 10
P++ SPPM
Sbjct: 15 PIEHSFSPPM 24


>sp|SECD_PYRFU|PROTEIN-EXPORT membrane protein SecD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVQMELSPPM 10
PV M L PP+
Sbjct: 165 PVDMFLDPPV 174


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 1 PVQMELSPPM 10
PV+ LSP M
Sbjct: 15 PVEHSLSPTM 24


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PVQMELSPPM 10
PV+ +SPPM
Sbjct: 10 PVEHSVSPPM 19


>sp|AROE_METKA|SHIKIMATE dehydrogenase (NADP(+))|Methanopyrus kandleri (strain AV19 /

Query: 1 PVQMELSPPM 10
PV+ LSP M
Sbjct: 20 PVEHSLSPAM 29




157|Sequence|781|790|LSPPMGVVQK

>sp|SECY_AERPE|PROTEIN translocase subunit SecY|Aeropyrum pernix (strain ATCC 700893

Query: 1 LSPPMGVVQ 9
LSPP GVVQ
Sbjct: 318 LSPPRGVVQ 326


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPMGVV 8
PPMG+V
Sbjct: 303 PPMGIV 308


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 LSPPMGVVQK 10
L P MG+V K
Sbjct: 598 LGPLMGIVMK 607


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSPPMGVVQK 10
L P MG+V K
Sbjct: 598 LGPLMGIVMK 607


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PPMGVV 8
PPMGVV
Sbjct: 156 PPMGVV 161


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 LSPPMGVVQK 10
L P MG+V K
Sbjct: 598 LGPLMGIVMK 607


>sp|PAN_METMJ|PROTEASOME-ACTIVATING nucleotidase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LSPPMGVV 8
+SPP GV+
Sbjct: 184 ISPPKGVL 191


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SPPMGVVQ 9
SPP+GV +
Sbjct: 192 SPPLGVFE 199




158|Sequence|786|795|GVVQKEPAQR

>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 2 VVQKEPAQR 10
VVQ EPA R
Sbjct: 166 VVQAEPAGR 174


>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19

Query: 1 GVVQKEP 7
GVV+KEP
Sbjct: 78 GVVRKEP 84




159|Sequence|791|800|EPAQREPPPP

>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 4 QREPPPP 10
+R PPPP
Sbjct: 901 ERNPPPP 907


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 AQREPPPP 10
++REP PP
Sbjct: 15 SKREPKPP 22


>sp|RS3A_THEAC|SMALL ribosomal subunit protein eS1|Thermoplasma acidophilum (strain ATCC

Query: 1 EPAQREPPP 9
EP + EP P
Sbjct: 199 EPQKNEPAP 207


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 5 REPPPP 10
REPP P
Sbjct: 287 REPPAP 292




160|Sequence|796|805|EPPPPREPPL

>sp|RFCL_METLZ|REPLICATION factor C large subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 EPPPPREPP 9
EPP P PP
Sbjct: 442 EPPVPETPP 450


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPPREPPL 10
PPP+ PP+
Sbjct: 888 PPPKYPPV 895


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPPPPREPPL 10
EP P R+P L
Sbjct: 171 EPNPERDPIL 180


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 EPPPPRE 7
EP PPRE
Sbjct: 96 EPGPPRE 102


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EPPPPRE 7
EP PPRE
Sbjct: 96 EPGPPRE 102


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EPPPPRE 7
EP PPR+
Sbjct: 172 EPNPPRD 178


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 EPPPPREPPL 10
E P PR+P L
Sbjct: 364 ERPLPRDPQL 373


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PPREP 8
PPREP
Sbjct: 275 PPREP 279


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 2 PPPPREP 8
P PPR P
Sbjct: 231 PLPPRRP 237


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PPREP 8
PPREP
Sbjct: 275 PPREP 279


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PPREP 8
PPREP
Sbjct: 275 PPREP 279


>sp|EF1A_HALWD|ELONGATION factor 1-alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EPPPPREPPL 10
EP PP + PL
Sbjct: 215 EPQPPTDAPL 224


>sp|EF1A_NATPD|ELONGATION factor 1-alpha|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPPPPREPPL 10
EP PP + PL
Sbjct: 216 EPQPPTDAPL 225


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PPPREPP 9
P P EPP
Sbjct: 396 PAPSEPP 402


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 PPREP 8
PPREP
Sbjct: 275 PPREP 279


>sp|CCA_PYRIL|CCA-ADDING enzyme|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PPPREPP 9
P P EPP
Sbjct: 282 PYPNEPP 288


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 PPPPREP 8
PPPP +P
Sbjct: 262 PPPPVKP 268


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EPPPPREP 8
E PPP P
Sbjct: 113 ETPPPANP 120


>sp|DNAG_THEAC|DNA primase DnaG|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PPREPP 9
PP +PP
Sbjct: 324 PPEQPP 329


>sp|FTTA_METMP|TRANSCRIPTION termination factor FttA|Methanococcus maripaludis (strain DSM 14266

Query: 2 PPPPREPPL 10
P P R PP+
Sbjct: 130 PKPVRTPPI 138




161|Sequence|801|810|REPPLHMEPI

>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 REPPLHMEPI 10
R+PPL EP+
Sbjct: 11 RDPPLDFEPV 20


>sp|AGOG_METMP|N-GLYCOSYLASE/DNA lyase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PPLHMEPI 10
PPLH++ I
Sbjct: 214 PPLHIDSI 221


>sp|COBQ_METM6|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C6 /

Query: 2 EPPLHMEPI 10
EP +H PI
Sbjct: 69 EPSIHFNPI 77


>sp|COBQ_META3|PROBABLE cobyric acid synthase|Methanococcus aeolicus (strain ATCC

Query: 2 EPPLHMEPI 10
EP +H PI
Sbjct: 69 EPSIHFNPI 77


>sp|COBQ_METMP|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 EPPLHMEPI 10
EP +H PI
Sbjct: 69 EPSVHFNPI 77


>sp|COBQ_METM7|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C7 /

Query: 2 EPPLHMEPI 10
EP +H PI
Sbjct: 69 EPSVHFNPI 77


>sp|COBQ_METM5|PROBABLE cobyric acid synthase|Methanococcus maripaludis (strain C5 /

Query: 2 EPPLHMEPI 10
EP +H PI
Sbjct: 69 EPSVHFNPI 77


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EPPLHMEPI 10
EP +H PI
Sbjct: 69 EPSVHFNPI 77


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 2 EPPLHMEPI 10
EP HM P+
Sbjct: 70 EPSHHMNPV 78


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 REPPLHMEP 9
R+PP EP
Sbjct: 15 RDPPTEFEP 23


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 EPPLHMEPI 10
EP + +EP+
Sbjct: 635 EPSIRLEPV 643


>sp|Y3535_METJA|UNCHARACTERIZED protein MJECL35|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPPLHMEP 9
EP +H+ P
Sbjct: 313 EPEIHLHP 320


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 3 PPLHMEPI 10
PPLH++ I
Sbjct: 204 PPLHLDSI 211


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 2 EPPLHMEP 9
EPP+ M+P
Sbjct: 227 EPPVEMKP 234


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 2 EPPLHMEP 9
EPP+ M+P
Sbjct: 226 EPPVEMKP 233


>sp|RS2_KORCO|SMALL ribosomal subunit protein uS2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 EPPLHMEP 9
+ PLH+EP
Sbjct: 119 QAPLHLEP 126


>sp|SYFB_NATPD|PHENYLALANINE--TRNA ligase beta subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 REPPLHMEP 9
REPP EP
Sbjct: 423 REPPTITEP 431


>sp|AGOG_PYRAB|N-GLYCOSYLASE/DNA lyase|Pyrococcus abyssi (strain GE5 /

Query: 3 PPLHMEPI 10
PPLH++ I
Sbjct: 203 PPLHIDSI 210


>sp|RL21_AERPE|LARGE ribosomal subunit protein eL21|Aeropyrum pernix (strain ATCC

Query: 3 PPLHMEPI 10
PP+H++P+
Sbjct: 91 PPVHLKPL 98


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PPLHMEPI 10
PPLH++ I
Sbjct: 225 PPLHIDSI 232


>sp|AGOG_PYRHO|N-GLYCOSYLASE/DNA lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PPLHMEPI 10
PPLH++ I
Sbjct: 203 PPLHIDSI 210


>sp|GSA_HALWD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 PLHMEP 9
P+H+EP
Sbjct: 155 PMHVEP 160


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EPPLHMEP 9
EPP+ M+P
Sbjct: 227 EPPVEMKP 234


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 EPPLHMEP 9
EPP+ M+P
Sbjct: 226 EPPVEMKP 233


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 REPPLHM 7
RE PLH+
Sbjct: 214 REAPLHL 220




162|Sequence|806|815|HMEPISKKPP

>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HMEPISKKP 9
H EP++K+P
Sbjct: 580 HKEPVAKEP 588


>sp|AATB_METMP|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain DSM 14266

Query: 2 MEPISKKPP 10
+ P+S+ PP
Sbjct: 121 LNPVSRNPP 129


>sp|AATB_METM7|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 MEPISKKPP 10
+ P+S+ PP
Sbjct: 121 LNPVSRNPP 129


>sp|AATB_METM6|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 MEPISKKPP 10
+ P+S+ PP
Sbjct: 121 LNPVSRNPP 129


>sp|AATB_METM5|A-TYPE ATP synthase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 MEPISKKPP 10
+ P+S+ PP
Sbjct: 121 LNPVSRNPP 129


>sp|IF2B_METLZ|TRANSLATION initiation factor 2 subunit|Methanocorpusculum labreanum (strain

Query: 1 HMEPISKK 8
H+E ISKK
Sbjct: 156 HIESISKK 163


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 1 HMEPISKKP 9
HM P+ KP
Sbjct: 74 HMNPVLLKP 82


>sp|AATB_METVS|A-TYPE ATP synthase subunit B|Methanococcus vannielii (strain ATCC 35089

Query: 2 MEPISKKPP 10
+ P+S+ PP
Sbjct: 121 LNPVSRNPP 129


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EPISKKP 9
+PI+KKP
Sbjct: 50 KPITKKP 56


>sp|Y1056_AERPE|PROTEIN APE_1056.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 MEPISKKP 9
MEP+ KKP
Sbjct: 126 MEPLPKKP 133


>sp|HEM3_THEAC|PROBABLE porphobilinogen deaminase|Thermoplasma acidophilum (strain ATCC

Query: 4 PISKKPP 10
P+SK PP
Sbjct: 109 PLSKLPP 115


>sp|AATD_ARCFU|A-TYPE ATP synthase subunit D|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EPISKKP 9
EPI KKP
Sbjct: 108 EPIRKKP 114


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 2 MEPISKKPP 10
M P S+ PP
Sbjct: 115 MNPYSRMPP 123


>sp|GUAAA_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit A|Pyrococcus furiosus

Query: 1 HMEPISKKPP 10
HM+ + K PP
Sbjct: 127 HMDEVKKLPP 136


>sp|AATB_METTL|A-TYPE ATP synthase subunit B|Methanothermococcus thermolithotrophicus

Query: 2 MEPISKKPP 10
+ P+S+ PP
Sbjct: 53 LNPVSRNPP 61




163|Sequence|811|820|SKKPPLRKDK

>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PLRKDK 10
PLRKDK
Sbjct: 528 PLRKDK 533


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SKKPPLRKDK 10
S KPP+ KD+
Sbjct: 54 SVKPPIGKDE 63


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 SKKPPLRK 8
+KKPPL +
Sbjct: 69 NKKPPLSR 76




164|Sequence|816|825|LRKDKKEKSN

>sp|Y145_ARCFU|UNCHARACTERIZED protein AF_0145|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LRKDKKEKSN 10
LRK +KSN
Sbjct: 101 LRKGSSQKSN 110


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LRKDKKEKSN 10
+ DKK++SN
Sbjct: 1 MNPDKKKRSN 10




165|Sequence|821|830|KEKSNMQSER

***** No hits found ******


166|Sequence|826|835|MQSERARKEQ

***** No hits found ******


167|Sequence|831|840|ARKEQVLIEV

>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 RKEQVLIE 9
+KEQVLIE
Sbjct: 2 KKEQVLIE 9




168|Sequence|836|845|VLIEVGLVPV

>sp|FEN_METBF|FLAP endonuclease 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 LIEVGLVPV 10
LIEVG+ PV
Sbjct: 68 LIEVGIKPV 76


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|PURQ_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanothermobacter thermautotrophicus

Query: 1 VLIEVGLVP 9
+L EVGLVP
Sbjct: 90 ILAEVGLVP 98


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 2 LIEVGLVPV 10
LIE G +PV
Sbjct: 207 LIEKGFIPV 215


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 3 IEVGLVPV 10
IEVGL P+
Sbjct: 144 IEVGLTPL 151


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 3 IEVGLVPV 10
I+VGLVPV
Sbjct: 143 IDVGLVPV 150


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 3 IEVGLVPV 10
IEVGL P+
Sbjct: 144 IEVGLTPL 151


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 1 VLIEVGLVP 9
++ EVGL+P
Sbjct: 283 IITEVGLIP 291


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 3 IEVGLVPV 10
IEVGL P+
Sbjct: 144 IEVGLTPL 151


>sp|MOAA_METM5|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C5 /

Query: 3 IEVGLVPV 10
IEVGL P+
Sbjct: 144 IEVGLTPL 151


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LIEVGLVPV 10
LIE G +PV
Sbjct: 207 LIEKGFIPV 215


>sp|LYSZ_IGNH4|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Ignicoccus hospitalis

Query: 1 VLIEVGLVPV 10
L+E GLVPV
Sbjct: 146 ALVERGLVPV 155


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IEVGLVPV 10
I VGLVPV
Sbjct: 250 INVGLVPV 257


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 VLIEVGLVP 9
VL E GL+P
Sbjct: 90 VLTEAGLLP 98


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 4 EVGLVPV 10
EVGL+P+
Sbjct: 361 EVGLIPL 367


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 4 EVGLVPV 10
EVGL+P+
Sbjct: 361 EVGLIPL 367


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 4 EVGLVPV 10
EVGL+P+
Sbjct: 361 EVGLIPL 367


>sp|PURQ_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Pyrococcus abyssi (strain GE5 /

Query: 1 VLIEVGLVP 9
VL E GL+P
Sbjct: 90 VLTEAGLLP 98


>sp|GGR_THEKO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IEVGLVPV 10
I VGL+PV
Sbjct: 252 INVGLIPV 259


>sp|MOAA_ARCFU|PROBABLE GTP 3',8-cyclase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 EVGLVPV 10
EVGL PV
Sbjct: 143 EVGLTPV 149


>sp|PURQ_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLIEVGLVP 9
VL+E+G +P
Sbjct: 109 VLVELGALP 117


>sp|ARLY_METST|ARGININOSUCCINATE lyase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VLIEVGLVP 9
+LIE G++P
Sbjct: 43 MLIEEGIIP 51


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 3 IEVGLVPV 10
+ VGLVPV
Sbjct: 250 VNVGLVPV 257


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 2 LIEVGLVPV 10
L E+G+VPV
Sbjct: 489 LYEMGVVPV 497


>sp|HACB_METJA|METHANOGEN homoaconitase small subunit|Methanocaldococcus jannaschii (strain

Query: 3 IEVGLVPV 10
I VGL+P+
Sbjct: 96 INVGLIPI 103


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 LIEVGLVPV 10
L E+G+VPV
Sbjct: 489 LYEMGVVPV 497


>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LIEVGLVPV 10
L+E G+VP+
Sbjct: 138 LLEYGVVPI 146


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LIEVGLVPV 10
L+E G+VP+
Sbjct: 138 LLEYGVVPI 146


>sp|ILVD_SULTO|DIHYDROXY-ACID dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LIEVGLVP 9
LIE+GL P
Sbjct: 244 LIEIGLKP 251


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 2 LIEVGLVPV 10
L E+GLVP+
Sbjct: 179 LAELGLVPM 187


>sp|PMDHL_AERPE|PHOSPHOMEVALONATE dehydratase large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 IEVGLVPV 10
+EVGL P+
Sbjct: 387 VEVGLAPI 394


>sp|FEN_SULAC|FLAP endonuclease 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LIEVGLVPV 10
+IE G++P+
Sbjct: 68 IIESGIIPI 76


>sp|DPCKG_METBF|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LIEVGLVP 9
L+EVG++P
Sbjct: 55 LLEVGIIP 62


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 IEVGLVPV 10
+ VGL+PV
Sbjct: 250 VNVGLIPV 257


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 IEVGLVP 9
IE+GL+P
Sbjct: 98 IEIGLLP 104


>sp|SELD_METJA|SELENIDE, water dikinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLIEVGLVP 9
VLIE+ L+P
Sbjct: 265 VLIEINLLP 273




169|Sequence|841|850|GLVPVKDSWL

>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 1 GLVPVKDSW 9
GL VKD+W
Sbjct: 176 GLAGVKDAW 184


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 1 GLVPVKDSW 9
GL VKD+W
Sbjct: 172 GLAGVKDAW 180


>sp|Y1561_METJA|UNCHARACTERIZED protein MJ1561|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PVKDSW 9
P KDSW
Sbjct: 337 PFKDSW 342


>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 1 GLVPVKDSW 9
GL +KD+W
Sbjct: 176 GLAGIKDAW 184


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 1 GLVPVKDSW 9
GL +KD+W
Sbjct: 176 GLAGIKDAW 184


>sp|MTMC2_METMA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLVPVKDSWL 10
G PV D W+
Sbjct: 185 GGAPVSDKWI 194


>sp|MTMC1_METMA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GLVPVKDSWL 10
G PV D W+
Sbjct: 185 GGAPVSDKWI 194


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 1 GLVPVKDSWL 10
G PV D W+
Sbjct: 184 GGAPVSDKWI 193


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 1 GLVPVKDSWL 10
G PV D W+
Sbjct: 184 GGAPVSDKWI 193


>sp|FDHD_THEVO|SULFUR carrier protein FdhD|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PVKDSWL 10
PV D WL
Sbjct: 58 PVHDDWL 64


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 1 GLVPVKDSW 9
GL VKD+W
Sbjct: 172 GLAGVKDAW 180


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 1 GLVPVKDSW 9
GL VKD+W
Sbjct: 172 GLAGVKDAW 180


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 3 VPVKDSW 9
+P+KD W
Sbjct: 692 LPIKDYW 698


>sp|DP2L_METMP|DNA polymerase II large subunit|Methanococcus maripaludis (strain DSM

Query: 3 VPVKDSW 9
+P+KD W
Sbjct: 692 LPIKDYW 698


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei

Query: 2 LVPVKDS 8
LVPV+DS
Sbjct: 14 LVPVQDS 20


>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 1 GLVPVKDSW 9
G +PV SW
Sbjct: 283 GTIPVIKSW 291


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVPVKDSW 9
LVP KDS+
Sbjct: 304 LVPPKDSY 311


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus (strain

Query: 1 GLVPVKDSWL 10
G +PV+ +W+
Sbjct: 172 GFLPVERAWI 181


>sp|MOAA_SACS2|PROBABLE GTP 3',8-cyclase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|MOAA_SACI7|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|MOAA_SACI6|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|MOAA_SACI4|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|MOAA_SACI3|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain M.16.27)

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|MOAA_SACI2|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|MOAA_SACI1|PROBABLE GTP 3',8-cyclase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GLVPVK 6
GLVPVK
Sbjct: 146 GLVPVK 151


>sp|R15PI_METJA|RIBOSE 1,5-bisphosphate isomerase|Methanocaldococcus jannaschii (strain

Query: 1 GLVPVKDSW 9
GL+P + +W
Sbjct: 288 GLIPPQGAW 296


>sp|FRHA_METVO|COENZYME F420 hydrogenase subunit alpha|Methanococcus voltae

Query: 1 GLVPVKDSWL 10
G+VP KD L
Sbjct: 83 GIVPPKDGLL 92


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GLVPVKDSW 9
+VP K++W
Sbjct: 129 AIVPAKNAW 137


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GLVPVKDSWL 10
G+VP +WL
Sbjct: 102 GIVPDPKAWL 111


>sp|RL3_METLZ|LARGE ribosomal subunit protein uL3|Methanocorpusculum labreanum

Query: 1 GLVPVKDSW 9
G+VP SW
Sbjct: 21 GIVPKYQSW 29


>sp|ENDA_HALSA|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 700922

Query: 2 LVPVKDSW 9
LVP +D W
Sbjct: 87 LVPDRDPW 94


>sp|ENDA_HALS3|TRNA-SPLICING endonuclease|Halobacterium salinarum (strain ATCC 29341

Query: 2 LVPVKDSW 9
LVP +D W
Sbjct: 87 LVPDRDPW 94


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 1 GLVPVKDSW 9
G+V + D W
Sbjct: 83 GIVSIDDEW 91




170|Sequence|846|855|KDSWLLKESV

>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 1 KDSWLLKESV 10
K+ WLLK++V
Sbjct: 494 KEYWLLKKAV 503


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KDSWLLK 7
KD WL+K
Sbjct: 188 KDKWLVK 194


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 4 WLLKESV 10
WL KES+
Sbjct: 390 WLFKESI 396


>sp|RS3A_THEGJ|SMALL ribosomal subunit protein eS1|Thermococcus gammatolerans (strain

Query: 1 KDSWLLKE 8
KD W +KE
Sbjct: 14 KDKWKMKE 21


>sp|RS3A_THEKO|SMALL ribosomal subunit protein eS1|Thermococcus kodakarensis (strain

Query: 1 KDSWLLKE 8
KD W +KE
Sbjct: 14 KDKWKMKE 21


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 SWLLKE 8
+WLLKE
Sbjct: 452 TWLLKE 457


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 SWLLKE 8
+WLLKE
Sbjct: 452 TWLLKE 457


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 SWLLKE 8
+WLLKE
Sbjct: 452 TWLLKE 457


>sp|RS3A_THEON|SMALL ribosomal subunit protein eS1|Thermococcus onnurineus (strain

Query: 1 KDSWLLKE 8
KD W +KE
Sbjct: 14 KDKWKMKE 21


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 3 SWLLKE 8
+WLLKE
Sbjct: 452 TWLLKE 457


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 SWLLKE 8
+WLLKE
Sbjct: 452 TWLLKE 457




171|Sequence|851|860|LKESVSTEDL

>sp|ARGC_METBF|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina barkeri (strain Fusaro /

Query: 2 KESVSTEDL 10
KE++ST+DL
Sbjct: 244 KETLSTDDL 252


>sp|Y860_PYRFU|UNCHARACTERIZED protein PF0860|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ESVSTEDL 10
ES+S EDL
Sbjct: 189 ESISLEDL 196


>sp|Y1156_METJA|CELL division cycle protein 48|Methanocaldococcus jannaschii (strain

Query: 1 LKESVSTEDL 10
+K SVS ED+
Sbjct: 867 IKPSVSKEDM 876




172|Sequence|856|865|STEDLSPPSP

>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 1 STEDLSPPSP 10
STE +S PSP
Sbjct: 464 STEFISNPSP 473


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 STEDLSPPSP 10
+TE+L PSP
Sbjct: 8 TTEELPEPSP 17


>sp|AMPPA_METAC|AMP phosphorylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STEDLSPP 8
+TED+ PP
Sbjct: 49 TTEDMVPP 56


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 TEDLSPPSP 10
TE+ +PP P
Sbjct: 899 TEERNPPPP 907


>sp|MPTA_AERPE|GTP cyclohydrolase MptA|Aeropyrum pernix (strain ATCC 700893

Query: 2 TEDLSPPSP 10
+DL PP P
Sbjct: 3 VQDLKPPKP 11


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EDLSPP 8
ED+SPP
Sbjct: 160 EDISPP 165




173|Sequence|861|870|SPPSPPLPKE

>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SPPSPPLPKE 10
+PP PLP E
Sbjct: 111 APPGHPLPWE 120


>sp|HTPX_ARCFU|PROTEASE HtpX homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PPLPK 9
PPLPK
Sbjct: 320 PPLPK 324


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 5 PPLPKE 10
PP+PKE
Sbjct: 228 PPMPKE 233


>sp|RAMA_METBA|[CO(II) methylated amine-specific corrinoid protein]|Methanosarcina barkeri

Query: 5 PPLPK 9
PPLPK
Sbjct: 436 PPLPK 440


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PPSPPLP 8
PP PLP
Sbjct: 275 PPREPLP 281


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPSPPLP 8
PP PLP
Sbjct: 275 PPREPLP 281


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PPSPPLP 8
PP PLP
Sbjct: 275 PPREPLP 281


>sp|SURE_METTH|5'-NUCLEOTIDASE SurE|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 PPSPP 6
PPSPP
Sbjct: 237 PPSPP 241


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PPSPPLPKE 10
P PPLP++
Sbjct: 265 PDIPPLPED 273


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PPSPPLP 8
PP PLP
Sbjct: 275 PPREPLP 281


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPSPP 6
PPSPP
Sbjct: 724 PPSPP 728


>sp|TBPD_HALSA|TATA-BOX-BINDING protein D|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPSPPL 7
PPSPP+
Sbjct: 94 PPSPPV 99


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 5 PPLPKE 10
PPLPK+
Sbjct: 528 PPLPKQ 533




174|Sequence|866|875|PLPKENLREE

>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 1 PLPKENLRE 9
P+ KEN+RE
Sbjct: 67 PITKENIRE 75


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLPKENLRE 9
PLP++ LRE
Sbjct: 171 PLPQDALRE 179


>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PLPKENLRE 9
P PKE+++E
Sbjct: 305 PFPKEDVKE 313


>sp|TRPD_PYRIL|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PLPKENLREE 10
PLP+ + REE
Sbjct: 255 PLPRASTREE 264


>sp|CBIZ_METMA|ADENOSYLCOBINAMIDE amidohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLPKENLREE 10
P P+E +REE
Sbjct: 45 PSPEEFIREE 54


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 3 PKENLREE 10
PK++LRE+
Sbjct: 77 PKDDLREK 84


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 PLPKENLRE 9
P+ KEN+RE
Sbjct: 67 PITKENVRE 75


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 1 PLPKENLRE 9
P P E +RE
Sbjct: 284 PFPSERIRE 292


>sp|RFHPS_ARCFU|BETA-RIBOFURANOSYLPHENOL 5'-phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PLPKENLRE 9
P+P E++RE
Sbjct: 199 PVPLEDVRE 207


>sp|Y1227_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 1 PLPKEN-LRE 9
P+PKEN LRE
Sbjct: 208 PMPKENELRE 217


>sp|TRPD_PYRCJ|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 PLPKENLREE 10
PLP+ REE
Sbjct: 258 PLPRARSREE 267


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PKENLREE 10
PK++LRE+
Sbjct: 77 PKDDLREK 84


>sp|TRPB1_SACS2|TRYPTOPHAN synthase beta chain 1|Saccharolobus solfataricus (strain ATCC

Query: 2 LPKENLREE 10
LPKE LR++
Sbjct: 44 LPKEVLRQQ 52


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PLPKENLREE 10
PLP+ + +EE
Sbjct: 258 PLPRASSKEE 267


>sp|MCRG_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PLPKENLRE 9
PLP+E L+E
Sbjct: 208 PLPEEKLKE 216


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PLPKENLRE 9
PLP LRE
Sbjct: 374 PLPSNALRE 382




175|Sequence|871|880|NLREEASGDQ

>sp|PSB1_NITMS|PROTEASOME subunit beta 1|Nitrosopumilus maritimus (strain SCM1)

Query: 1 NLREEASGD 9
+LR+ ASGD
Sbjct: 170 SLRDSASGD 178


>sp|PSB2_AERPE|PROTEASOME subunit beta 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 LREEASGD 9
LR+ ASGD
Sbjct: 189 LRDAASGD 196


>sp|PDXS_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermoplasma acidophilum (strain

Query: 2 LREEASGD 9
LREEAS D
Sbjct: 202 LREEASKD 209


>sp|Y639_METJA|UNCHARACTERIZED protein MJ0639|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LREEASG 8
LREE SG
Sbjct: 76 LREELSG 82




176|Sequence|876|885|ASGDQKLLNT

***** No hits found ******


177|Sequence|881|890|KLLNTGEGNK

>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KLLNTGEG 8
K+L TGEG
Sbjct: 337 KMLETGEG 344


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 2 LLNTGEG 8
L NTGEG
Sbjct: 207 LFNTGEG 213


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLLNTGEG 8
KLL+ GEG
Sbjct: 301 KLLSAGEG 308


>sp|CAS7_HALVD|CRISPR-ASSOCIATED protein Cas7|Haloferax volcanii (strain ATCC 29605

Query: 2 LLNTGEGNK 10
+++TGEGN+
Sbjct: 166 VISTGEGNR 174




178|Sequence|886|895|GEGNKEAPLQ

>sp|PYRB_METS5|ASPARTATE carbamoyltransferase catalytic subunit|Metallosphaera sedula

Query: 1 GEGNKEAPLQ 10
G+G +E P Q
Sbjct: 121 GDGKREHPTQ 130


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EGNKEAPLQ 10
+GNK+ PL+
Sbjct: 389 DGNKKIPLK 397


>sp|AGL14_HALVD|PROBABLE low-salt glycan biosynthesis reductase|Haloferax volcanii (strain

Query: 2 EGNKEAPLQ 10
EG++ AP+Q
Sbjct: 125 EGDEPAPIQ 133


>sp|PGP_METKA|PHOSPHOGLYCOLATE phosphatase|Methanopyrus kandleri (strain AV19 /

Query: 1 GEGNKEAPL 9
G+G+ +APL
Sbjct: 178 GDGDNDAPL 186




179|Sequence|891|900|EAPLQKVGAE

>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 1 EAPLQKVGAE 10
E P++KVGAE
Sbjct: 311 EHPIEKVGAE 320


>sp|HIS2_METPE|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EAPLQKVGAE 10
+ PL+KVG E
Sbjct: 38 DKPLEKVGEE 47


>sp|AATC_ARCFU|A-TYPE ATP synthase subunit C|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLQKVGAE 10
PL K+G+E
Sbjct: 163 PLSKIGSE 170


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 1 EAPLQKVGAE 10
E P++K+G E
Sbjct: 312 EHPIEKIGKE 321


>sp|DAPF_METM7|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C7 /

Query: 1 EAPLQKVG 8
E PL+K+G
Sbjct: 172 EFPLEKIG 179


>sp|DAPF_METM6|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C6 /

Query: 1 EAPLQKVG 8
E PL+K+G
Sbjct: 172 EFPLEKIG 179


>sp|DAPF_METMP|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EAPLQKVG 8
E PL+K+G
Sbjct: 172 EFPLEKIG 179


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLQKVGA 9
P++KVGA
Sbjct: 107 PIEKVGA 113


>sp|DAPF_METM5|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C5 /

Query: 1 EAPLQKVG 8
E PL+K+G
Sbjct: 172 EFPLEKIG 179


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 EAPLQKVGAE 10
E P++++G+E
Sbjct: 155 EVPVERLGSE 164


>sp|RNFC_METAC|ION-TRANSLOCATING oxidoreductase complex subunit C|Methanosarcina acetivorans

Query: 2 APLQKVGAE 10
APL K GAE
Sbjct: 39 APLVKKGAE 47




180|Sequence|896|905|KVGAEEADES

>sp|RS6E_HYPBU|SMALL ribosomal subunit protein eS6|Hyperthermus butylicus (strain DSM

Query: 1 KVGAEEAD 8
KVGAEEA+
Sbjct: 100 KVGAEEAE 107


>sp|TRM1_THEGJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Thermococcus gammatolerans

Query: 1 KVGAEEADES 10
+ GA++ADES
Sbjct: 235 RSGAKKADES 244


>sp|HTPX_HALSA|PROTEASE HtpX homolog|Halobacterium salinarum (strain ATCC 700922

Query: 2 VGAEEADE 9
VGAE+ DE
Sbjct: 56 VGAEDMDE 63




181|Sequence|901|910|EADESLPGLA

>sp|SYTC_SULTO|THREONINE--TRNA ligase catalytic subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DESLPGLA 10
DE+ PGLA
Sbjct: 149 DETAPGLA 156


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 2 ADESLPG 8
ADE LPG
Sbjct: 387 ADEPLPG 393




182|Sequence|906|915|LPGLAANINE

>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PGLAANINE 10
PGL +INE
Sbjct: 355 PGLGVSINE 363


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 1 LPGLAANINE 10
+PGLAA+I +
Sbjct: 59 VPGLAAHIRK 68


>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LPGLAANINE 10
LPG+ INE
Sbjct: 433 LPGIKEKINE 442


>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 1 LPGLAANINE 10
+PG++AN E
Sbjct: 77 IPGISANYTE 86


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PGLAANI 8
PGL ANI
Sbjct: 73 PGLLANI 79


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LPGLAANIN 9
+P L ANIN
Sbjct: 268 VPNLLANIN 276




183|Sequence|911|920|ANINESTHIS

***** No hits found ******


184|Sequence|916|925|STHISSSGQN

>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 STHISSSG 8
STHISS G
Sbjct: 908 STHISSVG 915


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 STHISSSG 8
STHISS G
Sbjct: 908 STHISSVG 915


>sp|HIS7_METPE|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 STHISSSGQN 10
+ HI SGQN
Sbjct: 150 TAHIRFSGQN 159


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 2 THISSSG 8
THISS G
Sbjct: 376 THISSGG 382




185|Sequence|921|930|SSGQNLNTPE

>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 GQNLNTPE 10
G +LNTPE
Sbjct: 179 GVHLNTPE 186


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SSGQNLNTPE 10
S GQN+N P+
Sbjct: 124 SIGQNVNCPK 133


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 3 GQNLNTPE 10
G+N+++PE
Sbjct: 248 GENMHSPE 255


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 GQNLNTPE 10
G+N+++PE
Sbjct: 248 GENMHSPE 255


>sp|GIN23_SACS2|DNA replication complex GINS protein|Saccharolobus solfataricus

Query: 4 QNLNTP 9
QN+NTP
Sbjct: 80 QNMNTP 85


>sp|CYDE_METJA|L-CYSTEINE desulfidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SGQNLNTPE 10
+ +NL+TPE
Sbjct: 181 TNKNLSTPE 189


>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 3 GQNLNTPE 10
G+N+NT E
Sbjct: 180 GENINTQE 187




186|Sequence|926|935|LNTPEGETLN

>sp|RL14_NITMS|LARGE ribosomal subunit protein uL14|Nitrosopumilus maritimus (strain

Query: 1 LNTPEGET 8
L TPEGET
Sbjct: 105 LITPEGET 112


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LNTPEGETLN 10
L TPE ETL+
Sbjct: 993 LGTPEEETLD 1002


>sp|Y539_PYRAB|MEMO1 family protein PYRAB05390|Pyrococcus abyssi (strain GE5 /

Query: 4 PEGETL 9
PEGETL
Sbjct: 13 PEGETL 18


>sp|RL14_CENSY|LARGE ribosomal subunit protein uL14|Cenarchaeum symbiosum (strain A)

Query: 1 LNTPEGE 7
L TPEGE
Sbjct: 109 LTTPEGE 115


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 PEGETLN 10
PEGET+N
Sbjct: 245 PEGETVN 251


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 PEGETLN 10
PEGET+N
Sbjct: 245 PEGETVN 251


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LNTPEGE 7
L TPEGE
Sbjct: 110 LQTPEGE 116


>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 1 LNTPEGE 7
L TPEGE
Sbjct: 111 LQTPEGE 117


>sp|G6PI_PYRAB|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 1 LNTPEGE 7
L TPEGE
Sbjct: 110 LQTPEGE 116


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TPEGETLN 10
TP GETL+
Sbjct: 1105 TPSGETLH 1112


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NTPEGE 7
NTP+GE
Sbjct: 513 NTPDGE 518


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LNTPEGETLN 10
++ P G+TLN
Sbjct: 8 IHAPRGKTLN 17


>sp|G6PI_PYRHO|GLUCOSE-6-PHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LNTPEGE 7
L TPEGE
Sbjct: 110 LQTPEGE 116


>sp|RL18_METTH|LARGE ribosomal subunit protein uL18|Methanothermobacter

Query: 1 LNTPEGETL 9
LN P GE++
Sbjct: 128 LNVPHGESV 136


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NTPEGETL 9
NTPEG+ +
Sbjct: 276 NTPEGKAM 283


>sp|GPI_THEKO|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LNTPEGE 7
L TPEGE
Sbjct: 110 LQTPEGE 116


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 LNTPEGETL 9
+ TP+GET+
Sbjct: 71 VRTPDGETV 79


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 LNTPEG 6
LNTP+G
Sbjct: 186 LNTPDG 191


>sp|ENDA_METKA|TRNA-SPLICING endonuclease|Methanopyrus kandleri (strain AV19 /

Query: 3 TPEGETLN 10
TPEGE ++
Sbjct: 63 TPEGEPMS 70


>sp|ALBA2_AERPE|DNA/RNA-BINDING protein Alba 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 LNTPEGET 8
+ TPEG+T
Sbjct: 76 VQTPEGQT 83


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 LNTPEGE 7
LNTPE E
Sbjct: 343 LNTPEDE 349


>sp|ALBA_METTP|DNA/RNA-BINDING protein Alba|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LNTPEGET 8
LNT GET
Sbjct: 71 LNTDRGET 78


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 TPEGET 8
TP+GET
Sbjct: 250 TPDGET 255


>sp|RS3A_METTP|SMALL ribosomal subunit protein eS1|Methanothrix thermoacetophila

Query: 3 TPEGETL 9
TP GETL
Sbjct: 29 TPVGETL 35


>sp|SURE_METVS|5'-NUCLEOTIDASE SurE|Methanococcus vannielii (strain ATCC 35089

Query: 1 LNTPEGETLN 10
+N PE TLN
Sbjct: 176 VNIPEDATLN 185


>sp|AROK_METAC|SHIKIMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TPEGET 8
TPEG+T
Sbjct: 53 TPEGDT 58




187|Sequence|931|940|GETLNGKHQT

>sp|PURO_METVS|IMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GETLNGK 7
G+TLNGK
Sbjct: 10 GKTLNGK 16


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 4 LNGKHQ 9
+NGKHQ
Sbjct: 177 VNGKHQ 182


>sp|SPEE_PYRFU|POLYAMINE aminopropyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LNGKHQ 9
LNGKH+
Sbjct: 129 LNGKHE 134


>sp|TMG10_METJA|TRNA (guanine(10)-N2)-dimethyltransferase|Methanocaldococcus

Query: 1 GETLNGKHQ 9
G LNG+H+
Sbjct: 3 GYVLNGEHE 11


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 3 TLNGKHQT 10
TL GKH T
Sbjct: 81 TLQGKHNT 88


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 2 ETLNGKHQT 10
+ LNG H+T
Sbjct: 316 DELNGDHKT 324


>sp|SYFA_THESM|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus sibiricus (strain DSM 12597

Query: 1 GETLNGKH 8
GETL KH
Sbjct: 392 GETLTFKH 399


>sp|RS17_HALMA|SMALL ribosomal subunit protein uS17|Haloarcula marismortui (strain

Query: 1 GETLNGK 7
G+TLNG+
Sbjct: 29 GQTLNGE 35




188|Sequence|936|945|GKHQTDSIVC

>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GKHQTDSIV 9
G H TD+I+
Sbjct: 344 GSHHTDAII 352


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GKHQTDSIV 9
G H TD I+
Sbjct: 344 GSHHTDGII 352


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GKHQTDSIV 9
G H TD I+
Sbjct: 344 GSHHTDGII 352


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GKHQTDSIV 9
G H TD I+
Sbjct: 344 GSHHTDGII 352


>sp|R15PI_HALTV|RIBOSE 1,5-bisphosphate isomerase|Haloterrigena turkmenica (strain ATCC

Query: 3 HQTDSIVC 10
H TD++ C
Sbjct: 134 HSTDALAC 141


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 1 GKHQTD 6
GKHQ D
Sbjct: 179 GKHQVD 184


>sp|R15PI_HALVD|RIBOSE 1,5-bisphosphate isomerase|Haloferax volcanii (strain ATCC 29605

Query: 3 HQTDSIVC 10
H TD++ C
Sbjct: 131 HSTDALAC 138




189|Sequence|941|950|DSIVCEMKMD

>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 DSIVCEM 7
D+I+CEM
Sbjct: 94 DTIICEM 100




190|Sequence|946|955|EMKMDTDQNT

>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 2 MKMDTDQNT 10
+K+D D NT
Sbjct: 192 IKLDEDNNT 200


>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 1 EMKMDTDQNT 10
++K DT+ NT
Sbjct: 416 DLKTDTNHNT 425




191|Sequence|951|960|TDQNTRENLT

>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TDQNTRENL 9
TD+N+ ENL
Sbjct: 76 TDENSVENL 84




192|Sequence|956|965|RENLTGINST

***** No hits found ******


193|Sequence|961|970|GINSTVEEPV

>sp|1A1D_PYRAB|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus abyssi

Query: 1 GINSTVEEP 9
GIN V+EP
Sbjct: 242 GINVKVQEP 250


>sp|SRP19_HYPBU|SIGNAL recognition particle 19 kDa|Hyperthermus butylicus (strain DSM

Query: 1 GINSTVEE 8
G+N TVEE
Sbjct: 51 GLNPTVEE 58


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 1 GINSTVEEPV 10
GIN TVE+ +
Sbjct: 188 GINETVEKTI 197


>sp|Y035_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 GINSTVEE 8
G+N TVEE
Sbjct: 24 GVNLTVEE 31


>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 3 NSTVEEPV 10
N TVEEP+
Sbjct: 22 NVTVEEPL 29




194|Sequence|966|975|VEEPVSPMLP

>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 3 EPVSPMLP 10
+PV PM+P
Sbjct: 128 KPVDPMIP 135


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC

Query: 1 VEEPVSPML 9
VE+P +PML
Sbjct: 84 VEQPENPML 92


>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VEEPVSPMLP 10
VE V+PM+P
Sbjct: 340 VEISVNPMIP 349


>sp|OGT_METBF|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VEEPVSPML 9
+E P+ P+L
Sbjct: 6 IESPIGPIL 14


>sp|SYA_METLZ|ALANINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 EEPVSPM 8
E+PVSP+
Sbjct: 493 EKPVSPL 499




195|Sequence|971|980|SPMLPPSAVE

>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 1 SPMLPPSA 8
S MLPP+A
Sbjct: 141 SGMLPPNA 148


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PILPPS 285


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PILPPS 285


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PILPPS 285


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PVLPPS 285


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PILPPS 285


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PILPPS 285


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 PMLPPS 7
P+LPPS
Sbjct: 280 PILPPS 285


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain

Query: 5 PPSAVE 10
PPSA+E
Sbjct: 59 PPSAIE 64


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 PMLPPSAV 9
P+LPP AV
Sbjct: 343 PVLPPRAV 350


>sp|AROC_HALMD|CHORISMATE synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 2 PMLPPSAV 9
P+LPP AV
Sbjct: 349 PVLPPRAV 356


>sp|AROC_HALMA|CHORISMATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PMLPPSAV 9
P+LPP AV
Sbjct: 333 PVLPPRAV 340


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 MLPPSAV 9
+LPPSAV
Sbjct: 351 ILPPSAV 357


>sp|AROC_HALWD|CHORISMATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 PMLPPSAV 9
P+LPP AV
Sbjct: 331 PVLPPRAV 338


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 MLPPSAV 9
+LPPSAV
Sbjct: 351 ILPPSAV 357




196|Sequence|976|985|PSAVEEREAV

>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain

Query: 1 PSAVEERE 8
PSA+E+RE
Sbjct: 60 PSAIEKRE 67


>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 1 PSAVEERE 8
PS+V+ERE
Sbjct: 25 PSSVKERE 32


>sp|Y120_METTH|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase|Methanothermobacter

Query: 1 PSAVEER 7
PSAV+ER
Sbjct: 59 PSAVDER 65




197|Sequence|981|990|EREAVSKTAL

>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 1 EREAVSKTAL 10
ERE +S TAL
Sbjct: 338 EREQISGTAL 347


>sp|PSB2_DESA1|PROTEASOME subunit beta 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 REAVSKT 8
REAVSKT
Sbjct: 2 REAVSKT 8


>sp|HIS3_HALSA|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 700922

Query: 2 REAVSKTA 9
REAV++TA
Sbjct: 43 REAVARTA 50


>sp|HIS3_HALS3|PHOSPHORIBOSYL-AMP cyclohydrolase|Halobacterium salinarum (strain ATCC 29341

Query: 2 REAVSKTA 9
REAV++TA
Sbjct: 43 REAVARTA 50




198|Sequence|986|995|SKTALASPPA

***** No hits found ******


199|Sequence|991|1000|ASPPATMAAN

>sp|ILVD_PYRNV|DIHYDROXY-ACID dehydratase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ASPPATMA 8
ASPPAT A
Sbjct: 220 ASPPATSA 227




200|Sequence|996|1005|TMAANESQEI

***** No hits found ******


201|Sequence|1001|1010|ESQEIDEDEG

>sp|DTDA_SULAC|D-AMINOACYL-TRNA deacylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 QEIDEDE 9
+EIDEDE
Sbjct: 25 EEIDEDE 31


>sp|COPP_THEAC|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 3 QEIDEDEG 10
QEID+ EG
Sbjct: 281 QEIDQSEG 288




202|Sequence|1006|1015|DEDEGIHSHE

>sp|HTPX_THESM|PROTEASE HtpX homolog|Thermococcus sibiricus (strain DSM 12597

Query: 1 DEDEGIHSHE 10
DE EG+ +HE
Sbjct: 125 DELEGVIAHE 134


>sp|HTPX_PYRHO|PROTEASE HtpX homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DEDEGIHSHE 10
DE EG+ +HE
Sbjct: 125 DELEGVIAHE 134


>sp|HTPX_PYRFU|PROTEASE HtpX homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DEDEGIHSHE 10
DE EG+ +HE
Sbjct: 125 DELEGVIAHE 134


>sp|HTPX_PYRAB|PROTEASE HtpX homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 DEDEGIHSHE 10
DE EG+ +HE
Sbjct: 125 DELEGVIAHE 134


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DEDEGIHSHE 10
DE EG+ HE
Sbjct: 125 DELEGVIGHE 134


>sp|HTPX_THEGJ|PROTEASE HtpX homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DEDEGIHSHE 10
DE EG+ HE
Sbjct: 125 DELEGVIGHE 134


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 2 EDEGIHSH 9
E EG+H H
Sbjct: 182 EQEGVHLH 189


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 3 DEGIHS 8
D+GIHS
Sbjct: 12 DDGIHS 17


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DEDEGIH 7
DEDEG++
Sbjct: 479 DEDEGVY 485


>sp|LYSY_IGNH4|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 DEDEGI 6
DEDEG+
Sbjct: 343 DEDEGL 348


>sp|GLNA_ARCFU|GLUTAMINE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEDEGIHSHE 10
D G+H+H+
Sbjct: 281 DNASGMHTHQ 290




203|Sequence|1011|1020|IHSHEGSDLS

>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IHSHEGSDL 9
+ HEGSDL
Sbjct: 279 VGEHEGSDL 287


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IHSHEGSD 8
+H++EG+D
Sbjct: 80 VHNYEGND 87


>sp|RL30E_METPE|LARGE ribosomal subunit protein eL30|Methanosphaerula palustris (strain

Query: 1 IHSHEGSDL 9
+H++EGS +
Sbjct: 57 VHTYEGSSM 65


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 IHSHEGSDL 9
I SH G DL
Sbjct: 187 IASHSGGDL 195


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 1 IHSHEGSDL 9
I SH G DL
Sbjct: 187 IASHSGGDL 195


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IHSHEGSD 8
+H++EG D
Sbjct: 80 VHNYEGQD 87


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 IHSHEGSD 8
+H++EG D
Sbjct: 80 VHNYEGKD 87


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IHSHEGSD 8
+H++EG D
Sbjct: 80 VHNYEGKD 87


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IHSHEGSD 8
+H++EG D
Sbjct: 80 VHNYEGKD 87


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 IHSHEGSD 8
+H++EG D
Sbjct: 80 VHNYEGKD 87


>sp|Y1758_ARCFU|UNCHARACTERIZED protein AF_1758|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHSHEGSD 8
IHSH G+D
Sbjct: 58 IHSHGGAD 65


>sp|Y101_METAC|PUTATIVE RNase MA_0101|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IHSHEGSDLS 10
IHS+ G DL+
Sbjct: 81 IHSYFGVDLN 90


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 IHSHEGSDL 9
I SH G DL
Sbjct: 187 ISSHAGGDL 195


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHSHEGSD 8
+H +EG D
Sbjct: 79 VHEYEGQD 86


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 IHSHEGSD 8
+H +EG D
Sbjct: 80 VHEYEGDD 87


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IHSHEGSD 8
+HS+EG++
Sbjct: 80 VHSYEGNE 87


>sp|PYRF_THEAC|OROTIDINE 5'-phosphate decarboxylase|Thermoplasma acidophilum (strain ATCC

Query: 3 SHEGSDL 9
SH GSDL
Sbjct: 114 SHPGSDL 120


>sp|COFE_NATPD|COENZYME F420:L-glutamate ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 HEGSDLS 10
HEG DL+
Sbjct: 13 HEGDDLA 19


Query: 4 HEGSDL 9
H+GSDL
Sbjct: 224 HDGSDL 229




204|Sequence|1016|1025|GSDLSDNMSE

>sp|ACDG1_METTE|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanosarcina

Query: 3 DLSDNMSE 10
D+SDNM E
Sbjct: 103 DVSDNMEE 110


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 1 GSDLSDNMSE 10
G D+SD +SE
Sbjct: 101 GVDISDELSE 110


>sp|Y3040_METAR|UPF0145 protein UNCMA_30400|Methanocella arvoryzae (strain DSM 22066

Query: 2 SDLSDNMSE 10
SD+ NMSE
Sbjct: 89 SDIGQNMSE 97


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 GSDLSDNMSE 10
GSD+SD+ S+
Sbjct: 189 GSDVSDSFSD 198




205|Sequence|1021|1030|DNMSEGSDDS

>sp|MCH_METTM|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanothermobacter marburgensis (strain ATCC

Query: 1 DNMSEGSDD 9
D M EG+DD
Sbjct: 13 DRMIEGADD 21


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC

Query: 1 DNMSEGSDD 9
DN+ GSDD
Sbjct: 51 DNLDAGSDD 59




206|Sequence|1026|1035|GSDDSGLHGA

>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 DSGLHGA 10
DSGLHGA
Sbjct: 340 DSGLHGA 346


>sp|SYK2_METMA|LYSINE--TRNA ligase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DDSGLHGA 10
DDSGL G+
Sbjct: 18 DDSGLSGS 25


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 DSGLHGA 10
D+GLHGA
Sbjct: 335 DTGLHGA 341


>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 1 GSDDSGLHG 9
G ++GLHG
Sbjct: 185 GGRNAGLHG 193


>sp|CMR7A_SACS2|CRISPR system CMR subunit Cmr7|Saccharolobus solfataricus (strain ATCC

Query: 3 DDSGLH 8
DD GLH
Sbjct: 48 DDKGLH 53


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GSDDSGLHGA 10
G+D SGL G+
Sbjct: 196 GADKSGLGGS 205


>sp|PDXT_NATPD|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Natronomonas pharaonis (strain

Query: 2 SDDSGLHG 9
+DDS +HG
Sbjct: 180 TDDSRIHG 187




207|Sequence|1031|1040|GLHGARPVPQ

>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 GLHGARPVP 9
GL GA+P+P
Sbjct: 49 GLPGAKPLP 57


>sp|RS13_THEVO|SMALL ribosomal subunit protein uS13|Thermoplasma volcanium (strain

Query: 2 LHGARPVP 9
L+G RP+P
Sbjct: 39 LNGERPIP 46


>sp|RNH2_PYRIL|RIBONUCLEASE HII|Pyrobaculum islandicum (strain DSM 4184

Query: 1 GLHGARPVPQ 10
LHG VPQ
Sbjct: 124 ALHGGESVPQ 133


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 GLHGARPVP 9
G+ GA+P+P
Sbjct: 43 GMPGAKPLP 51


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 4 GARPVP 9
GARP+P
Sbjct: 49 GARPMP 54


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 2 LHGARPVPQ 10
LHG +P P+
Sbjct: 186 LHGQKPGPR 194


>sp|Y1861_PYRAE|PUTATIVE ankyrin repeat protein PAE1861|Pyrobaculum aerophilum (strain ATCC

Query: 4 GARPVPQ 10
GARPVP
Sbjct: 239 GARPVPD 245


>sp|Y2265_METBU|PUTATIVE nickel insertion protein|Methanococcoides burtonii (strain DSM 6242

Query: 3 HGARPVP 9
HG PVP
Sbjct: 158 HGTLPVP 164


>sp|Y761_METBF|PUTATIVE nickel insertion protein|Methanosarcina barkeri (strain Fusaro /

Query: 3 HGARPVP 9
HG PVP
Sbjct: 159 HGVMPVP 165


>sp|Y1109_METTH|PUTATIVE nickel insertion protein|Methanothermobacter thermautotrophicus

Query: 1 GLHGARPVP 9
G HG PVP
Sbjct: 164 GAHGLTPVP 172


>sp|Y429_METAC|PUTATIVE nickel insertion protein|Methanosarcina acetivorans (strain ATCC

Query: 3 HGARPVP 9
HG PVP
Sbjct: 159 HGTLPVP 165


>sp|Y1617_METMA|PUTATIVE nickel insertion protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HGARPVP 9
HG PVP
Sbjct: 159 HGTLPVP 165




208|Sequence|1036|1045|RPVPQESSRK

>sp|RFCS_ARCFU|REPLICATION factor C small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPVPQESSRK 10
+PVP+E+ +K
Sbjct: 159 KPVPKEAMKK 168


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 2 PVPQESSR 9
PVPQE+ R
Sbjct: 348 PVPQEARR 355


>sp|CBIX_ARCFU|SIROHYDROCHLORIN cobaltochelatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RPVPQESSRK 10
RP+P E+ R+
Sbjct: 47 RPMPDEAIRE 56


>sp|SAMP2_HALVD|SMALL archaeal modifier protein 2|Haloferax volcanii (strain ATCC 29605

Query: 1 RPVPQESS 8
RPVP++ S
Sbjct: 44 RPVPEDQS 51




209|Sequence|1041|1050|ESSRKNAKEA

***** No hits found ******


210|Sequence|1046|1055|NAKEALAVKA

***** No hits found ******


211|Sequence|1051|1060|LAVKAAKGDF

>sp|EF1A_METS5|ELONGATION factor 1-alpha|Metallosphaera sedula (strain ATCC 51363

Query: 1 LAVKAAKGDF 10
LAV A KG+F
Sbjct: 113 LAVSARKGEF 122


>sp|Y188_METJA|UNCHARACTERIZED protein MJ0188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LAVKAAKGDF 10
+A+K +GD+
Sbjct: 182 IAIKTKRGDY 191




212|Sequence|1056|1065|AKGDFVCIFC

>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KGDFVCIFC 10
K ++ CIFC
Sbjct: 267 KENYTCIFC 275


>sp|TF2B_PYRIL|TRANSCRIPTION initiation factor IIB|Pyrobaculum islandicum (strain DSM 4184

Query: 2 KGDFVCIFC 10
+G+ VCI C
Sbjct: 51 RGEIVCIVC 59


>sp|TF2B_PYRNV|TRANSCRIPTION initiation factor IIB|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KGDFVCIFC 10
+G+ VCI C
Sbjct: 51 RGEVVCIVC 59


>sp|TF2B_PYRAR|TRANSCRIPTION initiation factor IIB|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KGDFVCIFC 10
+G+ VCI C
Sbjct: 51 RGEVVCIVC 59


>sp|TF2B_PYRAE|TRANSCRIPTION initiation factor IIB|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 KGDFVCIFC 10
+G+ VCI C
Sbjct: 51 RGEAVCIVC 59


>sp|SODM2_HALVD|SUPEROXIDE dismutase [Mn] 2|Haloferax volcanii (strain ATCC 29605

Query: 1 AKGDFVCIF 9
A+GDFV F
Sbjct: 170 ARGDFVSAF 178


>sp|SODM1_HALVD|SUPEROXIDE dismutase [Mn] 1|Haloferax volcanii (strain ATCC 29605

Query: 1 AKGDFVCIF 9
A+GDFV F
Sbjct: 171 ARGDFVSAF 179


>sp|MOAA_SULAC|PROBABLE GTP 3',8-cyclase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DFVCIFC 10
+F C FC
Sbjct: 21 NFTCFFC 27


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 3 GDFVC 7
GDFVC
Sbjct: 99 GDFVC 103


>sp|RL6_METJA|LARGE ribosomal subunit protein uL6|Methanocaldococcus jannaschii

Query: 2 KGDFVCIFC 10
+GD + IFC
Sbjct: 49 EGDEIVIFC 57


>sp|PYRI_PYRNV|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum neutrophilum

Query: 5 FVCIFC 10
FVC +C
Sbjct: 136 FVCTYC 141


>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 AKGDFVCIFC 10
++ +F C FC
Sbjct: 129 SENNFTCPFC 138


>sp|Y819_PYRHO|UNCHARACTERIZED methyltransferase PH0819|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 FVCIFC 10
F C+FC
Sbjct: 204 FNCVFC 209


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 2 KGDFVCIFC 10
+G++VC C
Sbjct: 29 RGEYVCANC 37


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 GDFVCIFC 10
GDF +FC
Sbjct: 42 GDFYELFC 49


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 3 GDFVCIFC 10
GDF +FC
Sbjct: 42 GDFYELFC 49


>sp|PYRI_PYRCJ|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum calidifontis

Query: 5 FVCIFC 10
FVC +C
Sbjct: 136 FVCAYC 141


>sp|PYRI_PYRAR|ASPARTATE carbamoyltransferase regulatory chain|Pyrobaculum arsenaticum

Query: 5 FVCIFC 10
FVC +C
Sbjct: 136 FVCAYC 141


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DFVCIFC 10
+F C+FC
Sbjct: 130 NFKCVFC 136


>sp|TRUB_THEVO|PROBABLE tRNA pseudouridine synthase B|Thermoplasma volcanium (strain ATCC

Query: 2 KGDFVCIF 9
KGD VC+
Sbjct: 244 KGDRVCVL 251


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 AKGDFVCI 8
KGD VC+
Sbjct: 234 GKGDRVCV 241




213|Sequence|1061|1070|VCIFCDRSFR

>sp|NOB1_PYRAB|ENDORIBONUCLEASE Nob1|Pyrococcus abyssi (strain GE5 /

Query: 1 VCIFCDRSFR 10
VCI C R F+
Sbjct: 128 VCIGCGRKFK 137


>sp|PYRI_PICTO|ASPARTATE carbamoyltransferase regulatory chain|Picrophilus torridus (strain

Query: 2 CIFCDRS 8
C++C+RS
Sbjct: 134 CLYCNRS 140


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CIFCDR 7
CIFC R
Sbjct: 272 CIFCKR 277


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 VCIFCDRSF 9
+C++C R++
Sbjct: 341 ICVYCQRNW 349


>sp|GUAAB_METKA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanopyrus kandleri

Query: 1 VCIFCDRSF 9
VC+F D F
Sbjct: 50 VCVFVDHGF 58


>sp|DPO4_NITMS|DNA polymerase IV|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VCIFCDR 7
VC+F DR
Sbjct: 33 VCVFSDR 39


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 CIFCDRSFR 10
C C R+FR
Sbjct: 92 CTSCGRTFR 100


>sp|NOB1_PYRHO|ENDORIBONUCLEASE Nob1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VCIFCDRSF 9
VCI C R F
Sbjct: 130 VCIGCGRKF 138


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CIFCDRSF 9
CI+CD +
Sbjct: 39 CIYCDTKY 46


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 CIFCD 6
C+FCD
Sbjct: 309 CVFCD 313


>sp|Y1141_METJA|UNCHARACTERIZED protein MJ1141|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CIFCDR 7
CIFC+R
Sbjct: 121 CIFCNR 126


>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 2 CIFCDRS 8
C++C+R+
Sbjct: 137 CVYCERT 143


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 2 CIFCDRS 8
C++C R+
Sbjct: 138 CVYCQRT 144


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CIFCD 6
CIFC+
Sbjct: 22 CIFCE 26


>sp|YIH50_HALSA|UNCHARACTERIZED protein in transposable element|Halobacterium salinarum (strain

Query: 1 VCIFCDRSF 9
+C CDR+F
Sbjct: 49 LCKDCDRTF 57


>sp|QUEE_METJA|7-CARBOXY-7-DEAZAGUANINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CIFCD 6
C++CD
Sbjct: 32 CVYCD 36


>sp|PYRI_SULTO|ASPARTATE carbamoyltransferase regulatory chain|Sulfurisphaera tokodaii

Query: 2 CIFCD 6
C++CD
Sbjct: 139 CVYCD 143


>sp|YHIT_SACS2|UNCHARACTERIZED HIT-like protein SSO2163|Saccharolobus solfataricus (strain

Query: 1 VCIFCD 6
+CIFC+
Sbjct: 1 MCIFCN 6




214|Sequence|1066|1075|DRSFRKGKDY

>sp|RPO1C_META3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus aeolicus (strain ATCC

Query: 1 DRSFRKGKD 9
DR + +GKD
Sbjct: 379 DRDYEEGKD 387


>sp|TRM14_PYRFU|TRNA (guanine(6)-N2)-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 RSFRKG 7
RSFRKG
Sbjct: 124 RSFRKG 129


>sp|PUR7_METS3|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 FRKGKD 9
FRKGKD
Sbjct: 215 FRKGKD 220


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 FRKGKDY 10
FR+G DY
Sbjct: 270 FREGTDY 276


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 4 FRKGKDY 10
FR+G DY
Sbjct: 275 FREGTDY 281


>sp|GLKA_PYRHO|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus horikoshii (strain ATCC

Query: 2 RSFRKGKD 9
R FRKG++
Sbjct: 168 REFRKGEE 175


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 DRSFRKGKDY 10
D + RKGK Y
Sbjct: 726 DIAVRKGKKY 735


>sp|CISY_HALVD|CITRATE synthase|Haloferax volcanii (strain ATCC 29605

Query: 4 FRKGKDY 10
FR+G DY
Sbjct: 144 FRRGDDY 150


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 2 RSFRKGKD 9
R F++GKD
Sbjct: 30 RDFKEGKD 37


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DRSFRKGKDY 10
D + RKGK Y
Sbjct: 857 DIAVRKGKKY 866


>sp|PYRC_PYRFU|DIHYDROOROTASE furiosus (strain ATCC 43587

Query: 1 DRSFRKGKD 9
++ F KGKD
Sbjct: 328 NKGFEKGKD 336




215|Sequence|1071|1080|KGKDYSKHLN

>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 1 KGKDYSKH 8
+GKD++KH
Sbjct: 135 RGKDHAKH 142


>sp|G3PP_METTH|GLYCERALDEHYDE 3-phosphate phosphatase|Methanothermobacter thermautotrophicus

Query: 1 KGKDYSKHLN 10
KG +Y +H N
Sbjct: 54 KGSNYDRHFN 63


>sp|SYFB_METB6|PHENYLALANINE--TRNA ligase beta subunit|Methanoregula boonei (strain DSM 21154

Query: 1 KGKDYSK 7
KG+DY+K
Sbjct: 178 KGRDYAK 184


>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 KGKDYSKHLN 10
+GKD +KH N
Sbjct: 60 EGKDLTKHTN 69


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 2 GKDYSKHL 9
GKD KHL
Sbjct: 50 GKDIEKHL 57


>sp|TRI_SACS2|TRICORN protease homolog|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KGKDYSKHLN 10
KGKD +H N
Sbjct: 276 KGKDLRRHTN 285


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 GKDYSKHL 9
GK Y +HL
Sbjct: 40 GKPYERHL 47


>sp|VORA_PYRHO|KETOISOVALERATE oxidoreductase subunit VorA|Pyrococcus horikoshii (strain ATCC

Query: 2 GKDYSK 7
G+DYSK
Sbjct: 249 GRDYSK 254


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KGKDYS 6
KG+DYS
Sbjct: 178 KGRDYS 183


>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 GKDYSKH 8
G+D++KH
Sbjct: 137 GRDHAKH 143


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 GKDYSKH 8
G+D++KH
Sbjct: 137 GRDHAKH 143


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 2 GKDYSKHL 9
G +YS+HL
Sbjct: 483 GGEYSEHL 490


>sp|RUXX_AERPE|PUTATIVE snRNP Sm-like protein|Aeropyrum pernix (strain ATCC 700893

Query: 3 KDYSKHLN 10
K Y +HLN
Sbjct: 36 KTYDQHLN 43


>sp|PRIS_HYPBU|DNA primase small subunit PriS|Hyperthermus butylicus (strain DSM

Query: 2 GKDYSKHLN 10
GK Y +HL+
Sbjct: 46 GKSYLRHLS 54


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 2 GKDYSKH 8
GKDY+K+
Sbjct: 169 GKDYTKY 175


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 1 KGKDYSK 7
KG+DYS+
Sbjct: 187 KGEDYSE 193


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 2 GKDYSKH 8
GKDY+K+
Sbjct: 169 GKDYTKY 175


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 2 GKDYSKH 8
GKDY+K+
Sbjct: 169 GKDYTKY 175


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KGKDYSKHL 9
KGKDY + L
Sbjct: 782 KGKDYYRLL 790


>sp|HEM1_SULTO|GLUTAMYL-TRNA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KGKDYSKHL 9
KG+D KHL
Sbjct: 91 KGEDAVKHL 99


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 2 GKDYSKH 8
GKDY+K+
Sbjct: 169 GKDYTKY 175


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GKDYSKHL 9
GKD +KHL
Sbjct: 94 GKDAAKHL 101


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 KDYSKHLN 10
K Y KHLN
Sbjct: 383 KKYDKHLN 390




216|Sequence|1076|1085|SKHLNRHLVN

>sp|SPEH_META3|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Methanococcus aeolicus (strain ATCC

Query: 2 KHLNRHLV 9
KHL +HL+
Sbjct: 2 KHLGKHLI 9


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 SKHLNRHL 8
S+HLNR +
Sbjct: 235 SRHLNRRI 242


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 2 KHLNRHLVN 10
KH ++ LVN
Sbjct: 284 KHFDKELVN 292


>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HLNRHLVN 10
HLNR+ +N
Sbjct: 245 HLNRNQIN 252


>sp|T1M2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 SKHLNRHLVN 10
++H+ +HL+N
Sbjct: 206 NRHIVQHLIN 215


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 SKHLNRHLV 9
S+HL HL+
Sbjct: 121 SRHLVHHLI 129




217|Sequence|1081|1090|RHLVNVYYLE

>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HLVNVYYLE 10
H+ N+YY E
Sbjct: 85 HVSNLYYTE 93


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HLVNVYYLE 10
H+ N+YY E
Sbjct: 85 HVSNLYYTE 93


>sp|ENGB_HALSA|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC

Query: 2 HLVNVYYL 9
H+V +YYL
Sbjct: 120 HVVELYYL 127


>sp|ENGB_HALS3|PROBABLE GTP-binding protein EngB|Halobacterium salinarum (strain ATCC 29341

Query: 2 HLVNVYYL 9
H+V +YYL
Sbjct: 120 HVVELYYL 127


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RHLVNVYY 8
R +VN YY
Sbjct: 194 RDIVNAYY 201


>sp|AATA_PYRIL|A-TYPE ATP synthase subunit A|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RHLVNVYYL 9
+H++NV Y+
Sbjct: 491 KHILNVAYM 499


>sp|Y1497_METJA|UNCHARACTERIZED metallohydrolase MJ1497|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RHLVNVYYLE 10
RH N Y LE
Sbjct: 264 RHYANFYMLE 273




218|Sequence|1086|1097|VYYLEEAAQGQE

>sp|HBCAL_NITMS|4-HYDROXYBUTYRATE--COA ligase [ADP-forming]|Nitrosopumilus maritimus (strain SCM1)

Query: 1 VYYLEEAAQGQE 12
V YLE+ GQE
Sbjct: 211 VMYLEDMGDGQE 222


>sp|RIBL_HALJB|FAD synthase|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 VYYLEEAAQ 9
++YLEEAA+
Sbjct: 18 IHYLEEAAR 26


>sp|RIBL_NATMM|FAD synthase|Natrialba magadii (strain ATCC 43099

Query: 1 VYYLEEAA 8
V+YLEEAA
Sbjct: 23 VHYLEEAA 30


>sp|RIBL_METLZ|FAD synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VYYLEEAAQ 9
+YYLEE+ +
Sbjct: 18 IYYLEESKK 26


>sp|RIBL_HALTV|FAD synthase|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 VYYLEEAA 8
V+YLEEAA
Sbjct: 19 VHYLEEAA 26


>sp|RIBL_HALSA|FAD synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VYYLEEAA 8
V+YLE+AA
Sbjct: 18 VHYLEDAA 25


>sp|RIBL_HALS3|FAD synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 VYYLEEAA 8
V+YLE+AA
Sbjct: 18 VHYLEDAA 25


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VYYLEEA 7
+YYLEE+
Sbjct: 18 LYYLEES 24


>sp|TLDD_SACS2|ZINC metalloprotease TldD homolog|Saccharolobus solfataricus (strain

Query: 1 VYYLEEAAQGQE 12
VYY +E +G+E
Sbjct: 274 VYYDDEGVEGRE 285


>sp|RIBL_METP4|FAD synthase|Methanolacinia petrolearia (strain DSM 11571

Query: 1 VYYLEEA 7
+YYLEE+
Sbjct: 18 IYYLEES 24


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YYLEEAAQ 9
YYL++AAQ
Sbjct: 475 YYLKDAAQ 482


>sp|RIBL_HALLT|FAD synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 VYYLEEAA 8
V+YLE+AA
Sbjct: 18 VHYLEDAA 25


>sp|RIBL_METHJ|FAD synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VYYLEEAAQ 9
++YLEE+A+
Sbjct: 18 LWYLEESAK 26






THE END