RB39B_HUMAN Blast Output
Archaea
1|Sequence|1|10|MEAIWLYQFR

>sp|ARNR1_SULAC|HTH-TYPE transcriptional activator ArnR1|Sulfolobus acidocaldarius (strain

Query: 1 MEAIWLY 7
+EAIWLY
Sbjct: 245 LEAIWLY 251


>sp|PDXS_DESA1|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Desulfurococcus amylolyticus

Query: 1 MEAIWLY 7
+EAIW+Y
Sbjct: 218 VEAIWVY 224


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 5 WLYQFR 10
WL+Q+R
Sbjct: 564 WLFQYR 569


>sp|DHYS_AERPE|PROBABLE deoxyhypusine synthase|Aeropyrum pernix (strain ATCC 700893

Query: 3 AIWLYQFR 10
AIW QFR
Sbjct: 241 AIWWSQFR 248


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 5 WLYQFR 10
WL+Q+R
Sbjct: 563 WLFQYR 568


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EAIWLYQF 9
EA W Y+F
Sbjct: 277 EAYWKYEF 284


>sp|KTHY_METJA|PROBABLE thymidylate kinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 MEAIWLYQ 8
M+A W Y+
Sbjct: 28 MDAFWTYE 35


>sp|Y1321_PYRHO|UPF0252 protein PH1321|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 WLYQFR 10
WLY FR
Sbjct: 147 WLYDFR 152




2|Sequence|6|15|LYQFRLIVIG

>sp|LYSK_SACS2|[LYSW]-LYSINE/[LYSW]-ORNITHINE hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YQFRLIVIG 10
Y F+ I++G
Sbjct: 137 YNFKYIIVG 145


>sp|COAD_PYRAE|PHOSPHOPANTETHEINE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 YQFRLIVIG 10
Y+FR +V+G
Sbjct: 3 YKFRNVVLG 11




3|Sequence|11|20|LIVIGDSTVG

>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LIVIGDS 7
+IVIGDS
Sbjct: 283 IIVIGDS 289


>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LIVIGDSTVG 10
++++GD T+G
Sbjct: 131 IVIVGDGTLG 140


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 IGDSTVG 10
IGD T+G
Sbjct: 1013 IGDETIG 1019


>sp|RL18A_PYRAR|LARGE ribosomal subunit protein eL20|Pyrobaculum arsenaticum (strain

Query: 3 VIGDSTVG 10
++GD+T G
Sbjct: 7 IVGDTTTG 14


>sp|PIMT_THEON|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 IVIGDSTVG 10
++IGD T G
Sbjct: 134 VIIGDGTKG 142


>sp|Y034_PYRHO|UPF0284 protein PH0034|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IVIGDSTVG 10
IVIG+ST G
Sbjct: 136 IVIGESTPG 144


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 3 VIGDSTVG 10
V+G+ST G
Sbjct: 212 VVGESTAG 219


>sp|GATC_METS5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit C|Metallosphaera sedula (strain ATCC

Query: 3 VIGDSTVG 10
+IG ST+G
Sbjct: 89 IIGPSTIG 96


>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 IVIGDSTVG 10
+++GD T+G
Sbjct: 125 MILGDGTLG 133


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IVIGDSTVG 10
+VIG+ST G
Sbjct: 134 LVIGESTPG 142




4|Sequence|16|25|DSTVGKSCLI

>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DSTVGKSCLI 10
D VGK+C++
Sbjct: 142 DRVVGKNCVL 151


>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DSTVGKSCLI 10
D VGK+C++
Sbjct: 145 DWVVGKNCIL 154


>sp|GFCR1_METAC|TRANSCRIPTIONAL regulator GfcR 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 STVGKSCLI 10
S VGK+C+I
Sbjct: 141 SVVGKNCVI 149




5|Sequence|21|30|KSCLIRRFTE

>sp|Y1110_METJA|UNCHARACTERIZED protein MJ1110|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KSCLIRRFTE 10
K LI+RF+E
Sbjct: 339 KDILIKRFSE 348


>sp|PROB_NATPD|GLUTAMATE 5-kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 KSCLIRRFTE 10
+S L+RR+TE
Sbjct: 101 QSHLMRRYTE 110


>sp|RKD2_PYRCJ|ARCADIN-2 calidifontis (strain DSM 21063

Query: 1 KSCLIRRFTE 10
K LIR FTE
Sbjct: 5 KVLLIRHFTE 14


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 4 LIRRFTE 10
LIR+FTE
Sbjct: 205 LIRKFTE 211


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 4 LIRRFTE 10
LIR+FTE
Sbjct: 205 LIRKFTE 211


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 4 LIRRFTE 10
LIR+FTE
Sbjct: 208 LIRKFTE 214


>sp|TRMJ_METJA|TRNA (cytidine-2'-O-)-methyltransferase TrmJ|Methanocaldococcus

Query: 1 KSCLIRRFTE 10
K LIR+F E
Sbjct: 179 KELLIRKFNE 188


>sp|MOAA_PYRAB|PROBABLE GTP 3',8-cyclase|Pyrococcus abyssi (strain GE5 /

Query: 1 KSCLIRR 7
K+CL+RR
Sbjct: 265 KTCLLRR 271


>sp|MOAA_PYRHO|PROBABLE GTP 3',8-cyclase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KSCLIRR 7
K+CL+RR
Sbjct: 265 KTCLLRR 271




6|Sequence|26|35|RRFTEGRFAQ

>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 3 FTEGRFA 9
FT+GRF+
Sbjct: 480 FTDGRFS 486


>sp|IDH_CALNO|ISOCITRATE dehydrogenase [NADP]|Caldococcus noboribetus

Query: 2 RFTEGRFAQ 10
++TEG F Q
Sbjct: 235 KYTEGAFRQ 243




7|Sequence|31|40|GRFAQVSDPT

>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 GRFAQVSDP 9
GR A VSDP
Sbjct: 192 GRIAIVSDP 200


>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GRFAQVSDP 9
GRF V+DP
Sbjct: 224 GRFDIVTDP 232


>sp|NUCS_AERPE|ENDONUCLEASE NucS|Aeropyrum pernix (strain ATCC 700893

Query: 1 GRFAQVSDPT 10
GRF S PT
Sbjct: 9 GRFGVASSPT 18




8|Sequence|36|45|VSDPTVGVDF

>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SDPTVGVDF 10
SDP G+DF
Sbjct: 364 SDPDEGMDF 372


>sp|Y1421_ARCFU|UPF0182 protein AF_1421|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VSDPTVGVD 9
VSDP G+D
Sbjct: 131 VSDPIFGID 139


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC

Query: 3 DPTVGVDF 10
+PT GV+F
Sbjct: 24 EPTAGVNF 31


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 DPTVGVDF 10
DP G DF
Sbjct: 577 DPEAGADF 584


>sp|Y1303_METHJ|UPF0182 protein Mhun_1303|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VSDPTVGVD 9
+SDP G+D
Sbjct: 120 ISDPVFGLD 128


>sp|RL5_METVS|LARGE ribosomal subunit protein uL5|Methanococcus vannielii (strain ATCC

Query: 3 DPTVGV 8
DPTVG+
Sbjct: 124 DPTVGI 129


>sp|RL5_METVA|LARGE ribosomal subunit protein uL5|Methanococcus vannielii

Query: 3 DPTVGV 8
DPTVG+
Sbjct: 124 DPTVGI 129


>sp|NNRE_CENSY|NAD(P)H-HYDRATE epimerase|Cenarchaeum symbiosum (strain A)

Query: 2 SDPTVGVDF 10
+DP V VDF
Sbjct: 168 ADPCVKVDF 176


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 VSDPTVGV 8
+SDP VGV
Sbjct: 1 MSDPKVGV 8


>sp|THSB_THEK8|CHAPERONIN subunit beta|Thermococcus sp. (strain KS-8)

Query: 4 PTVGVD 9
PT+GVD
Sbjct: 475 PTIGVD 480


>sp|THSB_THEKO|CHAPERONIN subunit beta|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 PTVGVD 9
PT+GVD
Sbjct: 475 PTIGVD 480


>sp|THS_DESSY|THERMOSOME subunit|Desulfurococcus sp. (strain SY)

Query: 4 PTVGVD 9
PT+GVD
Sbjct: 475 PTIGVD 480


>sp|THSB_THEK1|CHAPERONIN subunit beta|Thermococcus sp. (strain JCM 11816

Query: 4 PTVGVD 9
PT+GVD
Sbjct: 475 PTIGVD 480


>sp|Y182_METKA|PUTATIVE ABC transporter ATP-binding protein|Methanopyrus kandleri (strain

Query: 1 VSDPTVGVDF 10
+ +PT G+DF
Sbjct: 152 LDEPTSGLDF 161


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 TVGVDF 10
T+GVDF
Sbjct: 168 TIGVDF 173


>sp|RMLC_METTH|DTDP-4-DEHYDRORHAMNOSE 3,5-epimerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DPTVGVDF 10
DP +G+D+
Sbjct: 151 DPDIGIDW 158


>sp|RL5_METMJ|LARGE ribosomal subunit protein uL5|Methanoculleus marisnigri (strain

Query: 3 DPTVGV 8
DPT+G+
Sbjct: 113 DPTIGI 118


>sp|THS_PYRAB|THERMOSOME subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 PTVGVD 9
PT+G+D
Sbjct: 475 PTIGID 480


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 1 VSDPTVG 7
V+DPTVG
Sbjct: 135 VADPTVG 141


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 1 VSDPTVG 7
V+DPTVG
Sbjct: 135 VADPTVG 141


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VSDPTVGVDF 10
V DP VG+ F
Sbjct: 585 VLDPPVGIFF 594


>sp|RSAMH_METJA|(R)-S-ADENOSYL-L-METHIONINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VSDPTVG 7
V DPTVG
Sbjct: 80 VIDPTVG 86




9|Sequence|41|50|VGVDFFSRLV

>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VGVDFFSRLV 10
VGVD SRL+
Sbjct: 537 VGVDRISRLI 546


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 VGVDFFSRL 9
+GVD F +L
Sbjct: 74 IGVDLFCKL 82


>sp|TYW3_AERPE|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 VGVDFFSRLV 10
+G+D FSR V
Sbjct: 172 IGLDTFSREV 181


>sp|TAW22_NANEQ|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 2 GVDFFSRLV 10
G+++F R++
Sbjct: 214 GIEYFDRII 222


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus (strain

Query: 1 VGVDFFSRLV 10
+G+DF ++V
Sbjct: 202 IGIDFIEKIV 211


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 VGVDFFSRLV 10
VG+DF+ +V
Sbjct: 111 VGLDFYQGIV 120


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 VGVDFFSRLV 10
+GVDF+ L+
Sbjct: 912 LGVDFYDALL 921




10|Sequence|46|55|FSRLVEIEPG

>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 3 RLVEIEPG 10
RLVE++PG
Sbjct: 1152 RLVEVKPG 1159


>sp|Y1005_METKA|PUTATIVE HTH-type transcriptional regulatory protein|Methanopyrus kandleri

Query: 1 FSRLVEIEP 9
F+RLVE EP
Sbjct: 101 FARLVEGEP 109


>sp|IPYR_NANEQ|INORGANIC pyrophosphatase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 FSRLVEIEPG 10
F R E+EPG
Sbjct: 123 FERYKELEPG 132


>sp|GYRB_HALVD|DNA gyrase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 1 FSRLVEIEPG 10
F R+ ++EPG
Sbjct: 156 FERVRDLEPG 165


>sp|GYRB_HALL2|DNA gyrase subunit B|Haloferax lucentense (strain DSM 14919

Query: 1 FSRLVEIEPG 10
F R+ ++EPG
Sbjct: 156 FERVRDLEPG 165


>sp|KTHY_NATPD|PROBABLE thymidylate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FSRLVEIEP 9
+ RL+E EP
Sbjct: 159 YERLIEAEP 167


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 1 FSRLVEIE 8
++RL+EIE
Sbjct: 395 YNRLIEIE 402


>sp|ORNAT_PYRHO|ORNITHINE aminotransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SRLVEIEPG 10
+LVEI PG
Sbjct: 104 KKLVEIAPG 112


>sp|PSTB_PYRAE|PHOSPHATE import ATP-binding protein PstB|Pyrobaculum aerophilum (strain

Query: 1 FSRLVEIEP 9
F+RL+E+ P
Sbjct: 49 FNRLIELYP 57


>sp|ADEC_METMJ|ADENINE deaminase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 SRLVEIEPG 10
+R++EI PG
Sbjct: 340 ARVIEIVPG 348


>sp|SURE_HYPBU|5'-NUCLEOTIDASE SurE|Hyperthermus butylicus (strain DSM 5456

Query: 1 FSRLVEIEPG 10
+ LVE EPG
Sbjct: 216 YGTLVEPEPG 225




11|Sequence|51|60|EIEPGKRIKL

>sp|SYM_METKA|METHIONINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EIEPGKRIK 9
E+EPG+RI+
Sbjct: 660 EVEPGERIR 668


>sp|IPYR_SULAC|INORGANIC pyrophosphatase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EIEPGKRIKL 10
E+EPGK +K+
Sbjct: 140 ELEPGKYVKI 149


>sp|SYM_METAC|METHIONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EIEPGKRIK 9
EI+PG RI+
Sbjct: 704 EIKPGSRIR 712


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 1 EIEPGKR 7
EIEP KR
Sbjct: 26 EIEPAKR 32


>sp|IPYR_SULTO|INORGANIC pyrophosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIEPGKRIKL 10
E+EPGK +K+
Sbjct: 140 ELEPGKWVKI 149


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 IEPGKRIKL 10
IEPG R+ L
Sbjct: 371 IEPGSRVLL 379


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIEPGKRI 8
E EPGKR+
Sbjct: 321 EFEPGKRL 328


>sp|SYM_METBF|METHIONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EIEPGKRIK 9
EI+PG RI+
Sbjct: 702 EIKPGSRIR 710


>sp|CCA_PICTO|CCA-ADDING enzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 EIEPGKRI 8
+IEPG+RI
Sbjct: 118 KIEPGQRI 125


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIEPGKRI 8
E+EPG R+
Sbjct: 650 EVEPGTRV 657


>sp|HTPX2_SULAC|PROTEASE HtpX homolog 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 PGKRIKL 10
P KRIKL
Sbjct: 301 PAKRIKL 307


>sp|IPYR_NANEQ|INORGANIC pyrophosphatase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EIEPGKRIKL 10
E+EPGK +K+
Sbjct: 128 ELEPGKFVKV 137


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 313 EIQPGRRL 320


>sp|GATE_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanospirillum hungatei JF-1 (strain

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 309 EIQPGRRL 316


>sp|SFSA_PICTO|SUGAR fermentation stimulation protein homolog|Picrophilus torridus

Query: 2 IEPGKRIKL 10
I PG +IKL
Sbjct: 56 IYPGNKIKL 64


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 314 EIQPGRRL 321


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 323 EIQPGRRL 330


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 321 EIQPGRRL 328


>sp|PAN2_HALVD|PROTEASOME-ACTIVATING nucleotidase 2|Haloferax volcanii (strain ATCC 29605

Query: 1 EIEPGKRIKL 10
+IEPG R+ +
Sbjct: 111 DIEPGDRVAI 120


>sp|GATE_PYRHO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus horikoshii (strain ATCC

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 326 EIQPGRRL 333


>sp|GATE_THEGJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus gammatolerans (strain DSM

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 323 EIQPGRRL 330


>sp|GATE_PYRAB|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus abyssi (strain GE5 /

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 326 EIQPGRRL 333


>sp|IPYR_AERPE|INORGANIC pyrophosphatase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EIEPGKRIKL 10
E+EPGK +++
Sbjct: 144 ELEPGKWVRV 153


>sp|GATE_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus kodakarensis (strain ATCC

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 323 EIQPGRRL 330


>sp|GATE_PYRFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EIEPGKRI 8
EI+PG+R+
Sbjct: 322 EIQPGRRL 329


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 EIEPGKRIKL 10
EI PG +KL
Sbjct: 340 EISPGTSLKL 349


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 1 EIEPGKRIK 9
E EPG+R++
Sbjct: 333 EFEPGQRLE 341


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|GATE_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain ATCC

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|LACC_HALVD|LACCASE volcanii (strain ATCC 29605

Query: 2 IEPGKRIKL 10
++PG+R+++
Sbjct: 490 VDPGERVRI 498


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro /

Query: 1 EIEPGKRI 8
E++PG+R+
Sbjct: 320 EVQPGRRL 327


>sp|Y589_METMA|UPF0179 protein MM_0589|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 IEPGKRIKL 10
+EPG+R K+
Sbjct: 43 LEPGRRYKV 51


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 EIEPGKRI 8
EI+PG+R
Sbjct: 319 EIQPGRRF 326


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain DSM

Query: 1 EIEPGKR 7
EI+PG+R
Sbjct: 325 EIQPGRR 331


>sp|Y1048_THEON|UPF0179 protein TON_1048|Thermococcus onnurineus (strain NA1)

Query: 2 IEPGKRIKL 10
+EPG+R K+
Sbjct: 45 LEPGRRYKI 53


>sp|Y790_THEKO|UPF0179 protein TK0790|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IEPGKRIKL 10
+EPG+R K+
Sbjct: 40 LEPGRRYKI 48


>sp|RS17_PICTO|SMALL ribosomal subunit protein uS17|Picrophilus torridus (strain ATCC

Query: 1 EIEPGKRIKL 10
++ PG R+K+
Sbjct: 78 DVRPGDRVKI 87


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 EIEPGKRI 8
E EPG+R+
Sbjct: 326 EFEPGQRL 333


>sp|Y1381_PYRFU|UPF0179 protein PF1381|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IEPGKRIKL 10
+EPG+R K+
Sbjct: 39 LEPGRRYKI 47


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 EIEPGKRIKL 10
+I P KR++L
Sbjct: 1240 DIHPSKRLRL 1249


>sp|Y1477_PYRHO|UPF0179 protein PH1477|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IEPGKRIKL 10
+EPG+R K+
Sbjct: 39 LEPGRRYKI 47


>sp|PELO_METMJ|PROTEIN pelota homolog|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EIEPGKRI 8
E EPG+R+
Sbjct: 319 EFEPGERL 326


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 EIEPGKRI 8
E++PG+R
Sbjct: 313 EVQPGRRF 320


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 1 EIEPGKRI 8
E EPG+R+
Sbjct: 319 EFEPGERL 326


>sp|GATE_PYRCJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum calidifontis (strain DSM

Query: 1 EIEPGKRI 8
E++PG+R
Sbjct: 319 EVQPGRRF 326


>sp|PELO_METTP|PROTEIN pelota homolog|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EIEPGKRIK 9
E EPG+R++
Sbjct: 322 EFEPGERLE 330


>sp|GATE_PYRNV|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum neutrophilum (strain DSM

Query: 1 EIEPGKRI 8
E++PG+R
Sbjct: 319 EVQPGRRF 326


>sp|GATE_PYRAR|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum arsenaticum (strain DSM

Query: 1 EIEPGKRI 8
E++PG+R
Sbjct: 319 EVQPGRRF 326


>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 2 IEPGKRIKL 10
+EPG+R K+
Sbjct: 39 LEPGRRYKV 47


>sp|GATE_PYRIL|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EIEPGKRI 8
E++PG+R
Sbjct: 319 EVQPGRRF 326


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IEPGKRIKL 10
+ PG R+KL
Sbjct: 241 VPPGSRVKL 249




12|Sequence|56|65|KRIKLQIWDT

>sp|RF1_ARCFU|PEPTIDE chain release factor subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 KRIKLQIWDT 10
KRI++ WDT
Sbjct: 155 KRIEVLDWDT 164


>sp|IDI2_PYRFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRIKLQIWD 9
KR+ L+ WD
Sbjct: 246 KRLALRFWD 254


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 KRIKLQIWD 9
K++KL+ WD
Sbjct: 259 KQLKLEGWD 267


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RIKLQIWD 9
RI+L +WD
Sbjct: 443 RIRLSLWD 450


>sp|ARADH_SACS2|D-ARABINOSE 1-dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 1 KRIKLQIWDT 10
KR+ L+ +DT
Sbjct: 278 KRVSLEAFDT 287


>sp|QUED_PYRHO|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus horikoshii

Query: 1 KRIKLQIWD 9
K+IK++IW+
Sbjct: 132 KKIKVRIWE 140


>sp|RL37A_META3|LARGE ribosomal subunit protein eL43|Methanococcus aeolicus (strain

Query: 1 KRIKLQIWD 9
KRI IW+
Sbjct: 50 KRISTSIWE 58




13|Sequence|61|70|QIWDTAGQER

>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 47 QMWDCEGKE 55


>sp|CAPPA_METHJ|PHOSPHOENOLPYRUVATE carboxylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 47 QMWDCEGKE 55


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 46 QMWDFEGKE 54


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 46 QMWDFEGKE 54


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 46 QMWDFEGKE 54


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 46 QMWDFEGKE 54


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 48 QMWDFEGKE 56


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QIWDTAGQE 9
Q+WD G+E
Sbjct: 48 QMWDFEGKE 56


>sp|FLAB2_THEKO|FLAGELLIN B2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WDTAGQE 9
W T GQE
Sbjct: 443 WGTQGQE 449


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 QIWDTAGQE 9
++WD G E
Sbjct: 29 RVWDDEGNE 37


>sp|BARAC_PYRHO|BROAD substrate specificity amino-acid racemase|Pyrococcus horikoshii

Query: 1 QIWDTAGQE 9
+IWD G E
Sbjct: 52 RIWDKDGNE 60




14|Sequence|66|75|AGQERFRSIT

>sp|MALF_THELN|TREHALOSE/MALTOSE transport system permease protein|Thermococcus litoralis (strain

Query: 4 ERFRSIT 10
ERF+SIT
Sbjct: 205 ERFKSIT 211


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 GQERFRS 8
GQE+FRS
Sbjct: 169 GQEKFRS 175


>sp|PT1_HALVD|PHOSPHOENOLPYRUVATE-PROTEIN phosphotransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 AGQERFRSI 9
AG+ERF S+
Sbjct: 398 AGRERFESV 406


>sp|RL44E_THEAC|LARGE ribosomal subunit protein eL42|Thermoplasma acidophilum (strain

Query: 1 AGQERFRSIT 10
AGQ RFR +T
Sbjct: 35 AGQRRFRRVT 44


>sp|SYK_CENSM|LYSINE--TRNA ligase|Cenarchaeum symbiosum

Query: 2 GQERFRS 8
GQE+FRS
Sbjct: 168 GQEKFRS 174


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 3 QERFRSIT 10
QE F+SIT
Sbjct: 579 QEEFKSIT 586


>sp|PYRE_PYRAE|OROTATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GQERFRSI 9
G+ER+RS+
Sbjct: 177 GEERYRSV 184




15|Sequence|71|80|FRSITRAYYR

>sp|HIS1_HALSA|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 FRSITRAYY 9
F +ITRAY+
Sbjct: 118 FPTITRAYF 126


>sp|HIS1_HALS3|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 FRSITRAYY 9
F +ITRAY+
Sbjct: 118 FPTITRAYF 126


>sp|Y903_METJA|UNCHARACTERIZED protein MJ0903|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FRSITRAYY 9
++S+T+ YY
Sbjct: 252 YKSVTKYYY 260


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FRSITRAYYR 10
FR+I +YY+
Sbjct: 266 FRAIEESYYK 275


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RSITRAYYR 10
R++TR +YR
Sbjct: 1519 RNLTRNHYR 1527




16|Sequence|76|85|RAYYRNSVGG

>sp|THSA_THEAC|THERMOSOME subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 AYYRNSVGG 10
A Y NSVGG
Sbjct: 420 AKYANSVGG 428


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 2 AYYRNSVGG 10
+YY NS GG
Sbjct: 282 SYYENSTGG 290


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 YYRNSVGG 10
++RN++GG
Sbjct: 410 WFRNNIGG 417


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RAYYRNSV 8
R+YY N+V
Sbjct: 19 RSYYENAV 26


>sp|ARLY_PYRCJ|ARGININOSUCCINATE lyase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 AYYRNSVGG 10
A+YR+ +GG
Sbjct: 2 AFYRSWIGG 10


>sp|LEUD_THEKO|3-ISOPROPYLMALATE dehydratase small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 RAYYRNSV 8
R +YRN+V
Sbjct: 89 RIFYRNAV 96


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 RAYYRNSV 8
R +YRN+V
Sbjct: 89 RIFYRNAV 96


>sp|PSB2_SULAC|PROTEASOME subunit beta 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YYRNSVGG 10
Y+RNS+ G
Sbjct: 73 YHRNSITG 80


>sp|OFOA_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Sulfolobus sp

Query: 1 RAYYRNSVGG 10
R YY N GG
Sbjct: 37 REYYSNIKGG 46


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma volcanium

Query: 4 YRNSVGG 10
YR S+GG
Sbjct: 279 YRESIGG 285


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 AYYRNSVG 9
YYR SVG
Sbjct: 328 GYYRISVG 335




17|Sequence|81|90|NSVGGLLLFD

>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 NSVGGLLLFD 10
+SVGG L++D
Sbjct: 194 HSVGGKLIYD 203


>sp|IDSA_METJA|SHORT chain isoprenyl diphosphate synthase|Methanocaldococcus

Query: 4 GGLLLFD 10
GG++LFD
Sbjct: 8 GGIMLFD 14


>sp|MTAD_PYRHO|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GGLLLFD 10
GGL+L+D
Sbjct: 7 GGLILYD 13


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 4 GGLLLFD 10
GG+LL+D
Sbjct: 335 GGVLLYD 341


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 4 GGLLLFD 10
GG+LL+D
Sbjct: 335 GGVLLYD 341




18|Sequence|86|95|LLLFDITNRR

>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 LLLFDITNRR 10
++ FD+ NRR
Sbjct: 889 VIFFDVINRR 898


>sp|GUAAB_THEKO|GMP synthase [glutamine-hydrolyzing] subunit B|Thermococcus

Query: 2 LLFDITNR 9
+L+DITN+
Sbjct: 292 VLYDITNK 299


>sp|GUAAB_PYRHO|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus horikoshii

Query: 2 LLFDITNR 9
+L+DITN+
Sbjct: 293 VLYDITNK 300


>sp|GUAAB_PYRFU|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus furiosus

Query: 2 LLFDITNR 9
+L+DITN+
Sbjct: 298 VLYDITNK 305


>sp|GUAAB_PYRAB|GMP synthase [glutamine-hydrolyzing] subunit B|Pyrococcus abyssi

Query: 2 LLFDITNR 9
+L+DITN+
Sbjct: 293 VLYDITNK 300


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 2 LLFDITNRR 10
L+FD TN R
Sbjct: 518 LVFDFTNVR 526


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 2 LLFDITNRR 10
L+FD TN R
Sbjct: 518 LVFDFTNVR 526


>sp|Y079_METJA|UNCHARACTERIZED protein MJ0079|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLFDITNR 9
++FDITN+
Sbjct: 284 VIFDITNK 291


>sp|BRIX_PYRAE|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrobaculum

Query: 1 LLLFDITNR 9
LL +D+ NR
Sbjct: 71 LLFYDVINR 79




19|Sequence|91|100|ITNRRSFQNV

>sp|CDC6_METMJ|ORC1-TYPE DNA replication protein|Methanoculleus marisnigri (strain ATCC

Query: 1 ITNRRSFQN 9
+TNRR F+N
Sbjct: 16 LTNRRIFKN 24




20|Sequence|96|105|SFQNVHEWLE

>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 1 SFQNVHEWL 9
S Q +HEWL
Sbjct: 106 SKQTLHEWL 114


>sp|HJE_SACS2|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus solfataricus

Query: 2 FQNVHEW 8
F+ VHEW
Sbjct: 90 FKQVHEW 96


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 VHEWLE 10
+HEWLE
Sbjct: 73 LHEWLE 78


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 1 SFQNVHEW 8
S++N+H W
Sbjct: 94 SYENMHTW 101


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 1 SFQNVHEWL 9
SF N+HE L
Sbjct: 642 SFSNIHEAL 650


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 1 SFQNVHEWL 9
+ Q++H+W+
Sbjct: 131 TIQSIHDWM 139


>sp|MDH_THEVO|MALATE dehydrogenase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SFQNVHEWLE 10
S +NV EWL+
Sbjct: 312 SSKNVDEWLK 321


>sp|Y1094_METJA|UNCHARACTERIZED protein MJ1094|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 QNVHEWLE 10
+NV EW+E
Sbjct: 117 KNVKEWVE 124


>sp|MOAA_HALWD|PROBABLE GTP 3',8-cyclase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 QNVHEWL 9
Q VH+WL
Sbjct: 205 QRVHDWL 211


>sp|HJE_SACI5|CROSSOVER junction endodeoxyribonuclease Hje|Saccharolobus islandicus

Query: 2 FQNVHEW 8
F+ +HEW
Sbjct: 90 FKQIHEW 96


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 SFQNVHEWL 9
S +++HEWL
Sbjct: 107 SSKSLHEWL 115


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 NVHEWLE 10
++HEWL+
Sbjct: 97 DIHEWLK 103


>sp|HISX_METMP|HISTIDINOL dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FQNVHEW 8
F+N++EW
Sbjct: 99 FKNLNEW 105


>sp|Y1082_METJA|UNCHARACTERIZED protein MJ1082|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FQNVHEWL 9
+QNV +WL
Sbjct: 105 YQNVKKWL 112


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 SFQNVHEWL 9
+ VHEWL
Sbjct: 284 AIDGVHEWL 292


>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 SFQNVHEWLE 10
+F VH W E
Sbjct: 205 TFTMVHNWAE 214


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 SFQNVHEWLE 10
+F VH W E
Sbjct: 205 TFTMVHNWAE 214


>sp|ACDD2_METTE|ACETYL-COA decarbonylase/synthase complex subunit delta|Methanosarcina

Query: 2 FQNVHEW 8
F N+ EW
Sbjct: 102 FSNIEEW 108


>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 6 HEWLE 10
HEW+E
Sbjct: 90 HEWIE 94


>sp|RUBR1_METJA|PROBABLE Rubredoxin-1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SFQNVHEWLE 10
SF+ + EW+E
Sbjct: 68 SFEPLDEWVE 77


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 FQNVHEWL 9
F+N+HE L
Sbjct: 643 FRNIHEAL 650


>sp|DGGGP_THEPD|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermofilum pendens (strain DSM 2475

Query: 2 FQNVHEWL 9
FQ V +WL
Sbjct: 10 FQRVADWL 17


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FQNVHE 7
F+NVHE
Sbjct: 218 FRNVHE 223


>sp|IF2P_STAMF|PROBABLE translation initiation factor IF-2|Staphylothermus marinus (strain

Query: 3 QNVHEWL 9
Q+VH WL
Sbjct: 565 QHVHLWL 571


>sp|RL11_NANEQ|LARGE ribosomal subunit protein uL11|Nanoarchaeum equitans (strain

Query: 3 QNVHEWL 9
+ VHEW+
Sbjct: 89 RTVHEWV 95


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 VHEWLE 10
VH+W+E
Sbjct: 291 VHDWVE 296


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 QNVHEWLE 10
+N+ +W+E
Sbjct: 347 ENISQWIE 354


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 VHEWLE 10
VH WLE
Sbjct: 423 VHNWLE 428




21|Sequence|101|110|HEWLEETKVH

>sp|RLME_METPE|RIBOSOMAL RNA large subunit methyltransferase|Methanosphaerula palustris

Query: 1 HEWLEETKVH 10
HE LEE K H
Sbjct: 156 HELLEEVKKH 165


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 HEWLEET 7
+EWLEET
Sbjct: 241 YEWLEET 247


>sp|IF2P_METTP|PROBABLE translation initiation factor IF-2|Methanothrix thermoacetophila

Query: 2 EWLEETKVH 10
EW+EE K+
Sbjct: 455 EWMEEKKMQ 463


>sp|FTRL_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter

Query: 1 HEWLEE 6
+EWLEE
Sbjct: 129 YEWLEE 134


>sp|UVRC_METST|UVRABC system protein C|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EWLEETKVH 10
EWLEE H
Sbjct: 319 EWLEEKANH 327


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 EWLEETK 8
+WLEET+
Sbjct: 439 KWLEETE 445


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EWLEETK 8
EWLEE +
Sbjct: 40 EWLEEAQ 46


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 EWLEE 6
EWLEE
Sbjct: 273 EWLEE 277


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 HEWLEETK 8
+WL+ET+
Sbjct: 451 QKWLQETR 458


>sp|KAD6_SACS2|PUTATIVE adenylate kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|KAD6_SACI7|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|KAD6_SACI6|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|KAD6_SACI4|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|KAD6_SACI3|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain M.16.27)

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|KAD6_SACI2|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|KAD6_SACI1|PUTATIVE adenylate kinase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 EWLEETKVH 10
EWL +TKV
Sbjct: 162 EWLVDTKVQ 170


>sp|DNAG_METMJ|DNA primase DnaG|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EWLEETKVH 10
E+L E KVH
Sbjct: 154 EYLGEEKVH 162


>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 HEWLEETK 8
+EWL+ET+
Sbjct: 241 YEWLKETE 248


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 1 HEWLEE 6
+EW+EE
Sbjct: 129 YEWIEE 134


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EWLEETKVH 10
++LE+ K+H
Sbjct: 316 DYLEQEKIH 324


>sp|HIS4_METMJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoculleus marisnigri

Query: 1 HEWLEE 6
H WL+E
Sbjct: 36 HRWLDE 41


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 2 EWLEETK 8
EWLEE K
Sbjct: 56 EWLEENK 62


>sp|Y172_ARCFU|UNCHARACTERIZED protein AF_0172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HEWLEETKV 9
+EW ETK+
Sbjct: 90 NEWRIETKI 98


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 HEWLEETKVH 10
HE+L+ +H
Sbjct: 138 HEYLDRRNIH 147


>sp|RPO7_METJA|DNA-DIRECTED RNA polymerase subunit Rpo7|Methanocaldococcus jannaschii (strain

Query: 2 EWLEETK 8
EW+EE K
Sbjct: 174 EWIEEEK 180


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EWLEETKVH 10
+WLE +KV+
Sbjct: 38 QWLEPSKVY 46


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 4 LEETKVH 10
LEE KVH
Sbjct: 129 LEEAKVH 135


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 HEWLEETK 8
H+W+EE +
Sbjct: 442 HDWVEEAR 449




22|Sequence|106|115|ETKVHVQPYQ

>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 2 TKVHVQPY 9
T+VH PY
Sbjct: 343 TRVHYNPY 350


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 2 TKVHVQPY 9
T+VH PY
Sbjct: 343 TRVHYNPY 350


>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 ETKVHVQPYQ 10
E +VHV P++
Sbjct: 132 EARVHVDPFK 141


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ETKVHVQP 8
E +HVQP
Sbjct: 3 ERNIHVQP 10




23|Sequence|111|120|VQPYQIVFVL

>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VQPYQIVFVL 10
++PY+IV++L
Sbjct: 270 IEPYEIVYIL 279


>sp|MPGS_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VQPYQIVFVL 10
V+PY+IV++L
Sbjct: 270 VEPYEIVYLL 279


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VQPYQIVFVL 10
++PY+IV++L
Sbjct: 270 IEPYEIVYLL 279


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 VQPYQIVFV 9
++PYQ VFV
Sbjct: 622 LEPYQKVFV 630


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VQPYQIVFV 9
++PYQ VFV
Sbjct: 622 LEPYQKVFV 630


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 VQPYQIVFV 9
++PYQ VFV
Sbjct: 622 LEPYQKVFV 630


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VQPYQIVFV 9
++PYQ VFV
Sbjct: 622 LEPYQKVFV 630


>sp|RLMH_METHJ|PUTATIVE ribosomal RNA large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 PYQIVFVL 10
PYQ+VF++
Sbjct: 100 PYQLVFII 107


>sp|SRP54_METS3|SIGNAL recognition particle 54 kDa|Methanobrevibacter smithii (strain ATCC

Query: 1 VQPYQIVFV 9
V+PY+I+F+
Sbjct: 97 VKPYKILFL 105


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 VQPYQIVFV 9
V PYQ+V V
Sbjct: 294 VAPYQVVMV 302


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 2 QPYQIVFV 9
+PYQ VF+
Sbjct: 623 EPYQKVFI 630


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 2 QPYQIVFV 9
+PYQ VF+
Sbjct: 623 EPYQKVFI 630


>sp|EF2_ARCFU|ELONGATION factor 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VQPYQIVFV 9
++PYQ +F+
Sbjct: 620 LEPYQKIFI 628


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VQPYQIVFVL 10
V+PY++++ +
Sbjct: 332 VRPYELIYAI 341


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VQPYQIVFVL 10
++PY++++ +
Sbjct: 332 IRPYELIYAI 341


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VQPYQIVFVL 10
++PY++++ +
Sbjct: 332 IRPYELIYAI 341




24|Sequence|116|125|IVFVLVGHKC

>sp|NFI_THEPD|ENDONUCLEASE V|Thermofilum pendens (strain DSM 2475

Query: 2 VFVLVGHK 9
VFV +GHK
Sbjct: 175 VFVSIGHK 182


>sp|DHA_METMP|ALANINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FVLVGHK 9
FVL GHK
Sbjct: 26 FVLAGHK 32


>sp|TRMY_METAR|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanocella arvoryzae

Query: 3 FVLVGHK 9
FV+VGH+
Sbjct: 4 FVVVGHR 10


>sp|AOCD_METMP|ORNITHINE cyclodeaminase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FVLVGH 8
FVL+GH
Sbjct: 146 FVLIGH 151


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii (strain

Query: 2 VFVLVGHKC 10
+ V+VG KC
Sbjct: 194 ILVVVGDKC 202


>sp|TRMY_METTP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanothrix

Query: 3 FVLVGH 8
FV+VGH
Sbjct: 4 FVIVGH 9




25|Sequence|121|130|VGHKCDLDTQ

>sp|RL22_HALWD|LARGE ribosomal subunit protein uL22|Haloquadratum walsbyi (strain DSM

Query: 1 VGHKCDLD 8
VGH+ D+D
Sbjct: 67 VGHRSDID 74


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 2 GHKCDLD 8
GH+C+L+
Sbjct: 179 GHRCNLE 185


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GHKCDLD 8
GH C++D
Sbjct: 134 GHPCEMD 140


>sp|Y423_THESM|UPF0292 protein TSIB_0423|Thermococcus sibiricus (strain DSM 12597

Query: 2 GHKCDLDT 9
G+KC +DT
Sbjct: 87 GYKCRVDT 94


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 VGHKCDLD 8
VG KC LD
Sbjct: 18 VGEKCTLD 25


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 VGHKCDLD 8
VG KC LD
Sbjct: 18 VGEKCTLD 25


>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 2 GHKCDLDT 9
GH+C ++T
Sbjct: 214 GHECSIET 221


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 VGHKCD 6
VGH CD
Sbjct: 217 VGHVCD 222


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 2 GHKCDLDT 9
GH DLDT
Sbjct: 526 GHTTDLDT 533


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 2 GHKCDLDT 9
GH DLDT
Sbjct: 526 GHTTDLDT 533


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 2 GHKCDLDT 9
GH DLDT
Sbjct: 526 GHTTDLDT 533


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 2 GHKCDL 7
G KCDL
Sbjct: 565 GEKCDL 570


>sp|RL22_HALSA|LARGE ribosomal subunit protein uL22|Halobacterium salinarum (strain

Query: 1 VGHKCDLD 8
VGH+ D+D
Sbjct: 67 VGHRNDID 74


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 VGHKCDLD 8
VG+K D+D
Sbjct: 189 VGNKADID 196




26|Sequence|126|135|DLDTQRQVTR

***** No hits found ******


27|Sequence|131|140|RQVTRHEAEK

>sp|PURP_META3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcus aeolicus (strain ATCC

Query: 1 RQVTRHEAEK 10
RQ+ R EAE+
Sbjct: 116 RQILRWEAER 125


>sp|CYAS_METHJ|CYSTEATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RQVTRHEA 8
RQ+T H+A
Sbjct: 38 RQITLHDA 45




28|Sequence|136|145|HEAEKLAAAY

>sp|KUP_METBF|PROBABLE potassium transport system protein|Methanosarcina barkeri (strain

Query: 2 EAEKLAAAY 10
E+ KLAAAY
Sbjct: 358 ESSKLAAAY 366


>sp|GCH3_METS3|GTP cyclohydrolase III|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HEAEKLA 7
HEA+KLA
Sbjct: 95 HEAQKLA 101


>sp|RAD50_ARCFU|DNA double-strand break repair Rad50|Archaeoglobus fulgidus (strain

Query: 1 HEAEKLAA 8
H+AEKL+A
Sbjct: 514 HDAEKLSA 521




29|Sequence|141|150|LAAAYGMKYI

>sp|PCNA2_SACS2|DNA polymerase sliding clamp 2|Saccharolobus solfataricus (strain ATCC

Query: 1 LAAAYGMKYI 10
++++YGM+Y+
Sbjct: 192 VSSSYGMEYV 201


>sp|TOP6A_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 AAYGMKYI 10
A YG+KY+
Sbjct: 345 AKYGLKYV 352


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LAAAYGMKYI 10
L AAYG YI
Sbjct: 439 LLAAYGNSYI 448


>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LAAAYGMKY 9
L A YG+KY
Sbjct: 106 LEAEYGLKY 114


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 LAAAYGMKY 9
L AYG+KY
Sbjct: 106 LEDAYGIKY 114


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 AYGMKYI 10
+YGMKY+
Sbjct: 215 SYGMKYV 221


>sp|CHEB_ARCFU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Archaeoglobus fulgidus

Query: 3 AAYGMKYI 10
AYGMK I
Sbjct: 288 GAYGMKLI 295


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 2 AAAYGMKYI 10
A YG+KYI
Sbjct: 223 AKKYGIKYI 231


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25 /

Query: 2 AAAYGMKYI 10
A YG+KYI
Sbjct: 223 AKKYGIKYI 231


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 2 AAAYGMKYI 10
A YG+KYI
Sbjct: 223 AKKYGIKYI 231


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 AAAYGMKYI 10
A YG+KYI
Sbjct: 223 AKKYGIKYI 231


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 AAAYGMKYI 10
A YG+KYI
Sbjct: 223 AKKYGIKYI 231


>sp|PCNA1_THEKO|DNA polymerase sliding clamp 1|Thermococcus kodakarensis (strain ATCC

Query: 3 AAYGMKYI 10
+AYG++Y+
Sbjct: 197 SAYGIRYL 204


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LAAAYGMKY 9
LA AY +KY
Sbjct: 121 LAIAYALKY 129


>sp|DEOC_HALWD|DEOXYRIBOSE-PHOSPHATE aldolase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AAAYGM 7
AAAYGM
Sbjct: 31 AAAYGM 36


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LAAAYGMKY 9
LA AY +KY
Sbjct: 112 LALAYAVKY 120


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AAAYGMKYI 10
A+ YG KYI
Sbjct: 381 ASKYGNKYI 389




30|Sequence|146|155|GMKYIETSAR

>sp|ENGB_ARCFU|PROBABLE GTP-binding protein EngB|Archaeoglobus fulgidus (strain ATCC

Query: 2 MKYIETSAR 10
++YIET+AR
Sbjct: 75 VEYIETNAR 83


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MKYIETS 8
+KYIETS
Sbjct: 89 LKYIETS 95


>sp|Y075_METJA|UNCHARACTERIZED ATP-binding protein MJ0075|Methanocaldococcus jannaschii (strain

Query: 1 GMKYIETSAR 10
G+K+IE +A+
Sbjct: 98 GIKFIEKTAK 107


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 GMKYIETSAR 10
G +YIET+ R
Sbjct: 877 GRQYIETTMR 886


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 GMKYIETSAR 10
G +YIET+ R
Sbjct: 517 GRQYIETTMR 526


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 GMKYIETSAR 10
G +YIET+ R
Sbjct: 517 GRQYIETTIR 526


>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 1 GMKYIETSAR 10
G+ Y+E SAR
Sbjct: 157 GLLYLEFSAR 166


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 GMKYIETSAR 10
G YIET+ R
Sbjct: 1052 GRSYIETTIR 1061




31|Sequence|151|160|ETSARDAINV

>sp|PYRH_METAR|URIDYLATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 TSARDAINV 10
T ARD INV
Sbjct: 45 TPARDYINV 53


>sp|PHAC_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloarcula hispanica (strain ATCC 33960

Query: 1 ETSARDAINV 10
E S +DAIN+
Sbjct: 149 ERSGQDAINI 158


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 1 ETSARDAINV 10
+ +ARDA+N+
Sbjct: 239 QKAARDALNL 248




32|Sequence|156|165|DAINVEKAFT

>sp|CARA_METMA|CARBAMOYL phosphate synthase small chain|Methanosarcina mazei (strain ATCC

Query: 1 DAINVEKAF 9
DAIN KAF
Sbjct: 239 DAINAVKAF 247


>sp|CARA_METAC|CARBAMOYL phosphate synthase small chain|Methanosarcina acetivorans (strain

Query: 1 DAINVEKAF 9
DAIN KAF
Sbjct: 239 DAINAVKAF 247


>sp|SYP_SULTO|PROLINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DAINVEKAF 9
+AIN+ KAF
Sbjct: 179 EAINIYKAF 187


>sp|Y2135_ARCFU|UNCHARACTERIZED protein AF_2135|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DAINVEKA 8
DAI VEKA
Sbjct: 50 DAIMVEKA 57




33|Sequence|161|170|EKAFTDLTRD

>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 3 AFTDLTRD 10
AFT LTRD
Sbjct: 376 AFTSLTRD 383


>sp|MTNA_SULAC|PUTATIVE methylthioribose-1-phosphate isomerase|Sulfolobus acidocaldarius

Query: 1 EKAFTDLTR 9
EKA +DLT+
Sbjct: 89 EKAISDLTK 97


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FTDLTRD 10
FT+LTRD
Sbjct: 150 FTNLTRD 156


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 EKAFTDL 7
EKAFT+L
Sbjct: 412 EKAFTEL 418


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EKAFTDL 7
EKAFT+L
Sbjct: 412 EKAFTEL 418


>sp|TRPB_METVO|TRYPTOPHAN synthase beta chain|Methanococcus voltae

Query: 2 KAFTDLTR 9
KAF +LTR
Sbjct: 348 KAFMELTR 355


>sp|LYSY_NITMS|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 KAFTDLT 8
K FTDLT
Sbjct: 49 KGFTDLT 55


>sp|ACDE1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 3 AFTDLTRD 10
+FT+LT+D
Sbjct: 162 SFTNLTKD 169


>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 3 AFTDLTRD 10
AFT L+RD
Sbjct: 381 AFTSLSRD 388


>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 1 EKAFTDLTRD 10
EK+ DLT+D
Sbjct: 250 EKSVIDLTKD 259




34|Sequence|166|175|DLTRDIYELV

>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DLTRDIYELV 10
DL +DIYE+V
Sbjct: 6 DLRKDIYEIV 15


>sp|METK_METHJ|S-ADENOSYLMETHIONINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DLTRDIYELV 10
D+ RD+YE++
Sbjct: 369 DIERDVYEII 378


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DLTRDIYELV 10
+L+RD+YE V
Sbjct: 117 ELSRDVYERV 126


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 3 TRDIYELV 10
TRD+YE +
Sbjct: 245 TRDLYEAI 252


>sp|NQOR_METMA|NAD(P)H dehydrogenase (quinone)|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LTRDIYELV 10
+TRD+YE V
Sbjct: 66 VTRDMYEDV 74


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LTRDIYELV 10
LTR IYE++
Sbjct: 198 LTRKIYEIL 206


>sp|VORB_METTM|KETOISOVALERATE oxidoreductase subunit VorB|Methanothermobacter marburgensis

Query: 1 DLTRDIYEL 9
DLT D +EL
Sbjct: 148 DLTMDAFEL 156


>sp|DNAJ_METTE|CHAPERONE protein DnaJ|Methanosarcina thermophila

Query: 3 TRDIYELV 10
TRD YE++
Sbjct: 4 TRDYYEIL 11


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 DLTRDIYELV 10
+LTRDI E V
Sbjct: 841 ELTRDIIEYV 850


>sp|TRM56_CENSY|TRNA (cytidine(56)-2'-O)-methyltransferase|Cenarchaeum symbiosum (strain

Query: 4 RDIYEL 9
RD+YEL
Sbjct: 113 RDVYEL 118


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LTRDIYELV 10
LTR IYE++
Sbjct: 198 LTRRIYEVL 206


>sp|NADE_THEAC|NH(3)-DEPENDENT NAD(+) synthetase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 RDIYELV 10
RD+YEL
Sbjct: 159 RDVYELA 165




35|Sequence|171|180|IYELVKRGEI

>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 1 IYELVKRGE 9
IYEL+KRG+
Sbjct: 241 IYELLKRGD 249


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IYELVKRGE 9
IYEL+KRG+
Sbjct: 232 IYELLKRGD 240


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IYELVKRGE 9
IYEL+KRG+
Sbjct: 231 IYELLKRGD 239


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IYELVKRGEI 10
+ ELVKRGE+
Sbjct: 208 VMELVKRGEV 217


>sp|Y1053_METJA|UNCHARACTERIZED protein MJ1053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YELVKRGEI 10
YE++KRGE+
Sbjct: 94 YEMMKRGEL 102


>sp|PELO_THEON|PROTEIN pelota homolog|Thermococcus onnurineus (strain NA1)

Query: 1 IYELVKRGEI 10
IYE++KRG +
Sbjct: 242 IYEVIKRGTV 251


>sp|PELO_PYRFU|PROTEIN pelota homolog|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IYELVKRGEI 10
IYE++KRG +
Sbjct: 242 IYEVIKRGTV 251


>sp|PELO_THEGJ|PROTEIN pelota homolog|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IYELVKRGEI 10
IYE++KRG +
Sbjct: 242 IYEVIKRGTV 251


>sp|PELO_PYRHO|PROTEIN pelota homolog|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IYELVKRGEI 10
IYE++KRG +
Sbjct: 242 IYEVIKRGTV 251


>sp|RNH_SULTO|RIBONUCLEASE HI|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YELVKRGEI 10
YELV+RG++
Sbjct: 132 YELVRRGKL 140


>sp|PELO_THEKO|PROTEIN pelota homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IYELVKRG 8
IYE++KRG
Sbjct: 242 IYEVIKRG 249


>sp|MPTA_METHJ|GTP cyclohydrolase MptA|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IYELVKRGE 9
I+EL+KRG+
Sbjct: 243 IFELLKRGD 251


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 IYELVKRGEI 10
+YE++KRG +
Sbjct: 242 VYEVIKRGTV 251


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ELVKRGEI 10
ELVK GEI
Sbjct: 337 ELVKSGEI 344


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 IYELVKRG 8
I ELVKRG
Sbjct: 229 IVELVKRG 236


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 2 YELVKRGEI 10
YEL+KR E+
Sbjct: 469 YELIKRKEV 477


>sp|PIMT_THESM|PROTEIN-L-ISOASPARTATE O-methyltransferase|Thermococcus sibiricus (strain DSM 12597

Query: 1 IYELVKR 7
IYELVKR
Sbjct: 98 IYELVKR 104


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ELVKRGEI 10
ELVK GEI
Sbjct: 337 ELVKAGEI 344


>sp|ELP3_METIM|TRNA uridine(34) acetyltransferase|Methanocaldococcus infernus (strain

Query: 1 IYELVKRGEI 10
+YE+ KRGE
Sbjct: 314 LYEMWKRGEF 323


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 IYELVKRGE 9
+YE+ KRGE
Sbjct: 320 LYEMWKRGE 328


>sp|EF2_THEON|ELONGATION factor 2|Thermococcus onnurineus (strain NA1)

Query: 1 IYELVKRGEI 10
IYE ++ GEI
Sbjct: 498 IYEAIREGEI 507


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 IYELVKRGE 9
+Y+LVK GE
Sbjct: 430 VYKLVKNGE 438


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 ELVKRGEI 10
+L+KRGEI
Sbjct: 17 DLIKRGEI 24


>sp|Y2340_ARCFU|UNCHARACTERIZED protein AF_2340|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IYELVKRGEI 10
I ELVK GEI
Sbjct: 328 IKELVKAGEI 337


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 1 IYELVKRGEI 10
I E VKRGEI
Sbjct: 191 IAEKVKRGEI 200


>sp|MPTA_METM7|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C7 /

Query: 1 IYELVKRGE 9
+YEL+KR +
Sbjct: 233 VYELLKRSD 241


>sp|TOP6A_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IYELVKRGEI 10
IY +KRG I
Sbjct: 262 IYSTIKRGSI 271


>sp|BIOB_METMP|BIOTIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IYELVKRGEI 10
IYE +K G+I
Sbjct: 243 IYEKIKSGDI 252


>sp|MPTA_METMP|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain DSM 14266

Query: 1 IYELVKRGE 9
+YEL+KR +
Sbjct: 233 VYELLKRSD 241


>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 IYELVKRG 8
+YE V+RG
Sbjct: 226 VYEFVRRG 233


>sp|MPTA_METM6|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C6 /

Query: 1 IYELVKRGE 9
+YEL+KR +
Sbjct: 233 VYELLKRSD 241


>sp|MPTA_METM5|GTP cyclohydrolase MptA|Methanococcus maripaludis (strain C5 /

Query: 1 IYELVKRGE 9
+YEL+KR +
Sbjct: 233 VYELLKRSD 241


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 IYELVKRGE 9
+YE+VK GE
Sbjct: 25 MYEMVKVGE 33


>sp|MPTA_METVS|GTP cyclohydrolase MptA|Methanococcus vannielii (strain ATCC 35089

Query: 1 IYELVKRGE 9
+YEL+KR +
Sbjct: 233 VYELLKRSD 241


>sp|XPB_ARCFU|DNA 3'-5' translocase XPB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IYELVKRG 8
+YEL+ RG
Sbjct: 427 LYELISRG 434


>sp|CYAS_METLZ|CYSTEATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 IYELVKRGEI 10
+YE V GE+
Sbjct: 400 VYETVDTGEV 409


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 IYELVKRGE 9
+YE +K+G+
Sbjct: 248 LYEAIKKGD 256


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 IYELVKRGEI 10
+YE+V+ GEI
Sbjct: 22 MYEVVRVGEI 31


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 1 IYELVKRGEI 10
+YEL ++GE+
Sbjct: 143 LYELPEKGEV 152


>sp|BIOB_METJA|BIOTIN synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YELVKRGEI 10
YE +K GEI
Sbjct: 276 YEKIKNGEI 284


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IYELVKRGE 9
+YE+VKR +
Sbjct: 8 LYEIVKRAQ 16


>sp|SYK_SULAC|LYSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IYELVKRGEI 10
+E+V RG+I
Sbjct: 103 FFEIVDRGDI 112


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 ELVKRGEI 10
+L+KRGE+
Sbjct: 17 DLIKRGEL 24


>sp|Y582_METJA|UNCHARACTERIZED protein MJ0582|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YELVKRGEI 10
+ LVK+GE+
Sbjct: 111 HTLVKKGEV 119


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 2 YELVKR 7
YELVKR
Sbjct: 128 YELVKR 133


>sp|EF2_THEKO|ELONGATION factor 2|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IYELVKRGEI 10
IY+ ++ GEI
Sbjct: 498 IYQAIREGEI 507


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 ELVKRGEI 10
+L+KRGE+
Sbjct: 17 DLIKRGEL 24


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 IYELVKRGEI 10
IY+ ++ GEI
Sbjct: 498 IYQAIREGEI 507


>sp|AMPPA_THEON|AMP phosphorylase|Thermococcus onnurineus (strain NA1)

Query: 1 IYELVKRGEI 10
I LVK GEI
Sbjct: 50 ISNLVKEGEI 59


>sp|DNLI1_KORCO|DNA ligase 1|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YELVKRG 8
YE+V+RG
Sbjct: 191 YEIVRRG 197


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YELVKR 7
YELVKR
Sbjct: 184 YELVKR 189


>sp|PMDHS_METTP|PHOSPHOMEVALONATE dehydratase small subunit|Methanothrix thermoacetophila (strain

Query: 1 IYELVKRG 8
IY+L KRG
Sbjct: 69 IYQLRKRG 76


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IYELVKRGE 9
+YE +KR E
Sbjct: 137 VYETLKRAE 145




36|Sequence|176|185|KRGEITIQEG

>sp|Y1053_METJA|UNCHARACTERIZED protein MJ1053|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRGEITIQE 9
KRGE+ I+E
Sbjct: 98 KRGELNIEE 106


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGEITIQEG 10
+GEIT++ G
Sbjct: 18 KGEITVENG 26


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 2 RGEITIQEG 10
RGE I+EG
Sbjct: 420 RGEFIIREG 428


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGEITIQEG 10
+GEIT++ G
Sbjct: 18 KGEITVENG 26


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 1 KRGEITIQE 9
K+GE+TI++
Sbjct: 82 KKGELTIED 90


>sp|RL10_PYRAB|LARGE ribosomal subunit protein uL10|Pyrococcus abyssi (strain GE5 /

Query: 1 KRGEITIQE 9
+RG++TIQ+
Sbjct: 150 ERGKVTIQK 158


>sp|RL10_PYRFU|LARGE ribosomal subunit protein uL10|Pyrococcus furiosus (strain ATCC

Query: 1 KRGEITIQE 9
+RG++TIQ+
Sbjct: 150 ERGKVTIQK 158


>sp|ENDA_THEGJ|TRNA-SPLICING endonuclease|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRGEITIQEG 10
+RG+I ++EG
Sbjct: 48 ERGKIEVREG 57


>sp|GLMU_METJA|BIFUNCTIONAL protein GlmU|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGEITIQEG 10
+GE+ I+EG
Sbjct: 240 KGEVIIEEG 248


>sp|DAPAT_METMP|LL-DIAMINOPIMELATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KRGEITIQE 9
K GEI+I+E
Sbjct: 388 KDGEISIEE 396


>sp|Y1620_METJA|UNCHARACTERIZED protein MJ1620|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GEITIQE 9
GEITI+E
Sbjct: 113 GEITIRE 119


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KRGEITIQEG 10
+R +TIQEG
Sbjct: 62 EREPVTIQEG 71




37|Sequence|181|190|TIQEGWEGVK

>sp|IPYR_PYRAB|INORGANIC pyrophosphatase|Pyrococcus abyssi (strain GE5 /

Query: 2 IQEGWEGVK 10
I EGWEG +
Sbjct: 149 IVEGWEGAE 157


>sp|IPYR_PYRFU|INORGANIC pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IQEGWEGVK 10
I EGWEG +
Sbjct: 149 IVEGWEGAE 157


>sp|MTD_METLZ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocorpusculum

Query: 1 TIQEGWEGVK 10
T +EGWE +K
Sbjct: 98 TKKEGWEALK 107


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 QEGWEGVK 10
++GWEG++
Sbjct: 266 EKGWEGIR 273


>sp|MTD_METPE|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaerula

Query: 1 TIQEGWEGVK 10
T +EGWE +K
Sbjct: 98 TKKEGWEALK 107


>sp|IPYR_PYRHO|INORGANIC pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IQEGWEGVK 10
I EGWEG +
Sbjct: 149 IVEGWEGAE 157


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IQEGWEGVK 10
+QEG EGVK
Sbjct: 83 VQEGVEGVK 91


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 IQEGWEGVK 10
I EGWE K
Sbjct: 107 ISEGWEAAK 115


>sp|PELO_PYRAE|PROTEIN pelota homolog|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IQEGWEGVK 10
+QEG EGVK
Sbjct: 83 VQEGVEGVK 91


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 QEGWEGVK 10
+EGW+G++
Sbjct: 259 REGWKGIR 266


>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 3 QEGWEG 8
+EGWEG
Sbjct: 90 EEGWEG 95


>sp|ENDA_HALVD|TRNA-SPLICING endonuclease|Haloferax volcanii (strain ATCC 29605

Query: 3 QEGWEGV 9
+EGW GV
Sbjct: 89 REGWPGV 95


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 2 IQEGWEGVK 10
IQE WE ++
Sbjct: 175 IQEAWESME 183


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 IQEGWEGVK 10
I E WEG +
Sbjct: 607 IHEEWEGAR 615


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 2 IQEGWEGVK 10
IQE WE ++
Sbjct: 175 IQEAWESME 183


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 2 IQEGWEGVK 10
IQE WE ++
Sbjct: 175 IQEAWESME 183


>sp|PELO_PYRIL|PROTEIN pelota homolog|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IQEGWEGVK 10
+Q+G EGVK
Sbjct: 83 VQDGIEGVK 91


>sp|MTBB2_METBA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri

Query: 2 IQEGWEGVK 10
IQE WE ++
Sbjct: 127 IQEAWESME 135


>sp|Y1196_METJA|PUTATIVE amino-acid transporter MJ1196|Methanocaldococcus jannaschii (strain

Query: 5 GWEGV 9
GWEG+
Sbjct: 185 GWEGI 189


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 TIQEGWEGV 9
+I+EG EG+
Sbjct: 394 SIEEGCEGI 402


>sp|Y941_METKA|UNCHARACTERIZED methyltransferase MK0941|Methanopyrus kandleri (strain AV19 /

Query: 2 IQEGWE 7
I EGWE
Sbjct: 107 IDEGWE 112


>sp|PELO_PYRAR|PROTEIN pelota homolog|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IQEGWEGVK 10
++EG EGVK
Sbjct: 83 VEEGIEGVK 91


>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 GWEGVK 10
GW GVK
Sbjct: 87 GWAGVK 92


>sp|FSX1_HALSH|FUSEXIN 1|Haloplanus natans (strain DSM 17983

Query: 5 GWEGVK 10
GWEG+K
Sbjct: 107 GWEGMK 112


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 6 WEGVK 10
WEGVK
Sbjct: 5 WEGVK 9


>sp|Y956_METJA|UNCHARACTERIZED protein MJ0956|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WEGVK 10
WEG+K
Sbjct: 98 WEGIK 102


>sp|Y843_ARCFU|UNCHARACTERIZED protein AF_0843|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IQEGWEGVK 10
+Q+G++GVK
Sbjct: 22 VQKGFKGVK 30


>sp|Y441_NANEQ|PROTEIN NEQ441|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 IQEGWEG 8
I+EGW+
Sbjct: 138 IEEGWDA 144


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TIQEGWEGV 9
TI++G EG+
Sbjct: 395 TIEKGLEGI 403


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM

Query: 2 IQEGWEGV 9
++EG++GV
Sbjct: 32 VEEGYQGV 39


>sp|CBID_META3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 6 WEGVK 10
WEG+K
Sbjct: 355 WEGIK 359




38|Sequence|186|195|WEGVKSGFVP

>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 1 WEGVKSGFVP 10
W VKSGF P
Sbjct: 306 WLAVKSGFSP 315


>sp|DIPPS_PYRFU|BIFUNCTIONAL IPC transferase and DIPP|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEGVKSGF 8
W+GV +GF
Sbjct: 161 WDGVDTGF 168


>sp|Y534_THEGJ|UPF0284 protein TGAM_0534|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WEGVKSGFVP 10
W VK+GF P
Sbjct: 306 WLAVKAGFSP 315


>sp|CS3HD_PYRFU|CRISPR-ASSOCIATED endonuclease Cas3-HD|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEGVKSGFVP 10
WE VK+ ++P
Sbjct: 22 WEIVKNKYIP 31


>sp|Y688_THEON|UPF0284 protein TON_0688|Thermococcus onnurineus (strain NA1)

Query: 1 WEGVKSGFVP 10
W VK+GF P
Sbjct: 306 WLAVKAGFSP 315


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WEGVKSGFVP 10
W +K+GF P
Sbjct: 306 WLAIKAGFSP 315


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEGVKSGFVP 10
+EGVK ++P
Sbjct: 444 FEGVKEQYIP 453


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEGVKSGFVP 10
W VK+GF P
Sbjct: 306 WLAVKAGFSP 315


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 EGVKSGFVP 10
E +SGFVP
Sbjct: 602 ERTESGFVP 610


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 EGVKSGFVP 10
E +SGFVP
Sbjct: 602 ERTESGFVP 610


>sp|Y1154_METLZ|UPF0173 metal-dependent hydrolase Mlab_1154|Methanocorpusculum labreanum

Query: 1 WEGVKSGFVP 10
WEG+ VP
Sbjct: 85 WEGITVRMVP 94


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EGVKSGFVP 10
EGV S +VP
Sbjct: 90 EGVPSTYVP 98


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 3 GVKSGFVP 10
GV++GF+P
Sbjct: 61 GVRNGFLP 68


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 4 VKSGFVP 10
+K+GF+P
Sbjct: 579 IKNGFIP 585


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEGVKSGFV 9
WE +K G++
Sbjct: 1506 WEDLKKGYM 1514


>sp|IF6_AERPE|TRANSLATION initiation factor 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 WEGVKSGFVP 10
EGV+ G VP
Sbjct: 95 LEGVEVGIVP 104


>sp|AATF_METST|A-TYPE ATP synthase subunit F|Methanosphaera stadtmanae (strain ATCC

Query: 3 GVKSGF 8
G+KSGF
Sbjct: 21 GIKSGF 26


>sp|HIS6_METLZ|IMIDAZOLE glycerol phosphate synthase subunit|Methanocorpusculum labreanum

Query: 2 EGVKSGF 8
+GVK+GF
Sbjct: 193 DGVKTGF 199


>sp|CAS1A_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WEGVKS 6
W GVKS
Sbjct: 215 WRGVKS 220


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 2 EGVKSGFVP 10
EG++ G++P
Sbjct: 249 EGLEKGYIP 257


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EGVKSGFVP 10
EGV+ F+P
Sbjct: 41 EGVEVAFIP 49


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EGVKSGFVP 10
EGV+ F+P
Sbjct: 41 EGVEVAFIP 49


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 2 EGVKSGFVP 10
EGV+ F+P
Sbjct: 41 EGVEVAFIP 49


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 EGVKSGFVP 10
EGV+ F+P
Sbjct: 41 EGVEVAFIP 49


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 EGVKSGFV 9
EGV++G++
Sbjct: 297 EGVRAGYI 304




39|Sequence|191|200|SGFVPNVVHS

>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 SGFVPN 6
SGFVPN
Sbjct: 606 SGFVPN 611


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 SGFVPN 6
SGFVPN
Sbjct: 606 SGFVPN 611


>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 5 PNVVHS 10
PNVVHS
Sbjct: 163 PNVVHS 168


>sp|DNAG_METM6|DNA primase DnaG|Methanococcus maripaludis (strain C6 /

Query: 5 PNVVHS 10
PNVVHS
Sbjct: 163 PNVVHS 168


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 5 PNVVHS 10
PNVVHS
Sbjct: 163 PNVVHS 168


>sp|HYPA_THESM|HYDROGENASE maturation factor HypA|Thermococcus sibiricus (strain DSM 12597

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|HYPA_THEGJ|HYDROGENASE maturation factor HypA|Thermococcus gammatolerans (strain DSM 15229

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|HYPA_PYRHO|HYDROGENASE maturation factor HypA|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|HYPA_PYRFU|HYDROGENASE maturation factor HypA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 3 FVPNVVHS 10
F+P VVH+
Sbjct: 99 FIPEVVHA 106


>sp|Y794_METJA|UNCHARACTERIZED protein MJ0794|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GFVPNVV 8
GF+PN+V
Sbjct: 113 GFLPNIV 119


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 2 GFVPNVV 8
GFVP+V+
Sbjct: 484 GFVPSVI 490


>sp|DNAG_METMP|DNA primase DnaG|Methanococcus maripaludis (strain DSM 14266

Query: 5 PNVVHS 10
PN++HS
Sbjct: 163 PNIIHS 168


>sp|Y562_THEKO|UPF0251 protein TK0562|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 GFVPNVVH 9
GF+P V H
Sbjct: 21 GFIPQVRH 28


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 VPNVVH 9
VPN+VH
Sbjct: 103 VPNLVH 108


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 4 VPNVVH 9
+PNVVH
Sbjct: 104 LPNVVH 109


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 2 GFVPNVVH 9
G VP V+H
Sbjct: 168 GLVPEVLH 175


>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 PNVVHS 10
PNVVH+
Sbjct: 275 PNVVHN 280


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VPNVVH 9
+PN++H
Sbjct: 103 IPNIIH 108


>sp|RL32_PYRAE|LARGE ribosomal subunit protein eL32|Pyrobaculum aerophilum (strain

Query: 1 SGFVPNVVHS 10
SGFV +VH+
Sbjct: 82 SGFVEVLVHN 91


>sp|GGR_SULAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SGFVPNVVH 9
SGF N VH
Sbjct: 289 SGFTVNPVH 297




40|Sequence|196|205|NVVHSSEEVV

>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 1 NVVHSSEEV 9
N+ HSSEE+
Sbjct: 141 NITHSSEEI 149


>sp|NDK_METHJ|NUCLEOSIDE diphosphate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NVVHSSEEV 9
NV+H S+ V
Sbjct: 112 NVIHGSDSV 120




41|Sequence|201|213|SEEVVKSERRCLC

>sp|Y2234_ARCFU|UNCHARACTERIZED protein AF_2234|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SEEVVKSERRCLC 13
+ EV+K E+ CLC
Sbjct: 34 TSEVIKDEKGCLC 46


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 VVKSERRCLC 13
++K ER+C C
Sbjct: 243 LIKKERKCSC 252


>sp|PNPH_THEKO|PROBABLE 6-oxopurine nucleoside phosphorylase|Thermococcus kodakarensis

Query: 3 EVVKSERRCLC 13
E + ERRC C
Sbjct: 247 EYIPKERRCPC 257


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain

Query: 5 VKSERRCLC 13
V+ ERR LC
Sbjct: 5 VQGERRALC 13


>sp|SECD_METKA|PROTEIN-EXPORT membrane protein SecD|Methanopyrus kandleri (strain AV19 /

Query: 1 SEEVVKSERR 10
++E+V+ ERR
Sbjct: 322 TDEIVRGERR 331


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 EEVVKSERR 10
EE+V++E+R
Sbjct: 525 EEIVRAEQR 533


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 EEVVKSERR 10
EE+V++E+R
Sbjct: 525 EEIVRAEQR 533


>sp|ILVD_METM7|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C7 /

Query: 1 SEEVVKSERRCLC 13
+EE +KS C C
Sbjct: 173 TEEELKSIEECAC 185


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VVKSERRCLC 13
++ ERRC C
Sbjct: 247 LIPKERRCGC 256


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 3 EVVKSERRCLC 13
E+ S+R CLC
Sbjct: 203 EMSVSDRMCLC 213


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 SEEVVKSERR 10
SEE+++ ER+
Sbjct: 3 SEEIIELERK 12


>sp|Y823_METJA|UNCHARACTERIZED ATP-binding protein MJ0823|Methanocaldococcus jannaschii (strain

Query: 2 EEVVKSE 8
EEV+KSE
Sbjct: 221 EEVIKSE 227


>sp|RL18_METHJ|LARGE ribosomal subunit protein uL18|Methanospirillum hungatei JF-1

Query: 1 SEEVVKSERRC 11
+EE++ ++ RC
Sbjct: 133 NEEILPADERC 143


>sp|ILVD_METM5|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain C5 /

Query: 1 SEEVVKSERRCLC 13
+EE +KS C C
Sbjct: 173 TEEELKSIEECAC 185


>sp|AGOG_PYRAE|N-GLYCOSYLASE/DNA lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 EEVVKSERR 10
EEV+K ERR
Sbjct: 20 EEVLKLERR 28


>sp|MTIP_METJA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanocaldococcus jannaschii

Query: 8 ERRCLC 13
ER+C+C
Sbjct: 237 ERKCIC 242






THE END