1|Sequence|1|10|MAGGGAGDPG
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 GGGAGDPG 10
GG AGD G
Sbjct: 1535 GGAAGDRG 1542
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 GGGAGDPG 10
GG AGD G
Sbjct: 1535 GGAAGDRG 1542
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 MAGGGAGDP 9
+ GGGA DP
Sbjct: 191 LRGGGACDP 199
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 3 GGGAGDPG 10
GG GDPG
Sbjct: 383 GGPPGDPG 390
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 1 MAGGGAGDP 9
+ GGGA DP
Sbjct: 192 LRGGGACDP 200
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 3 GGGAGDP 9
GG GDP
Sbjct: 435 GGKTGDP 441
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 3 GGGAGDP 9
GG GDP
Sbjct: 435 GGKTGDP 441
>sp|PHOSP_PI1HC|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 3 GGGAGDP 9
GG GDP
Sbjct: 435 GGKTGDP 441
>sp|PHOSP_PI1HB|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 3 GGGAGDP 9
GG GDP
Sbjct: 435 GGKTGDP 441
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 GGGAGDPG 10
GG AGD G
Sbjct: 1534 GGTAGDRG 1541
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 GGGAGDPG 10
GG AGD G
Sbjct: 1534 GGTAGDRG 1541
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 MAGGGAGDPG 10
+AG G+ DP
Sbjct: 14 LAGAGSLDPA 23
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 1 MAGGGAGD 8
+AG G+GD
Sbjct: 348 LAGTGSGD 355
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 4 GGAGDPG 10
GG G PG
Sbjct: 75 GGGGRPG 81
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 205 GAGKPG 210
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1001 GAGRPG 1006
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 205 GAGKPG 210
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1001 GAGRPG 1006
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 205 GAGKPG 210
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1001 GAGRPG 1006
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 5 GAGDPG 10
GAG PG
Sbjct: 206 GAGKPG 211
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 206 GAGKPG 211
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1002 GAGRPG 1007
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 206 GAGKPG 211
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1002 GAGRPG 1007
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1005 GAGQPG 1010
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1006 GAGQPG 1011
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 AGGGAGDPG 10
+GG G+PG
Sbjct: 129 SGGYGGNPG 137
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 206 GAGKPG 211
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1002 GAGRPG 1007
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1006 GAGQPG 1011
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1005 GAGQPG 1010
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 MAGGGAGDPG 10
+A GAGD G
Sbjct: 2479 VAKQGAGDAG 2488
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 MAGGGAGDPG 10
+A GAGD G
Sbjct: 2479 VAKQGAGDAG 2488
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 999 GAGQPG 1004
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 GAGDPG 10
GAG PG
Sbjct: 1005 GAGQPG 1010
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AGGGAGDPG 10
AGG A PG
Sbjct: 109 AGGEAPQPG 117
>sp|BZLF1_EBVB9|LYTIC switch protein BZLF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AGGGAGDPG 10
AGG A PG
Sbjct: 109 AGGEAPQPG 117
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 MAGGGAGD 8
+AG G+GD
Sbjct: 348 LAGTGSGD 355
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 215 GAGKPG 220
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 215 GAGKPG 220
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 212 GAGKPG 217
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 212 GAGKPG 217
>sp|BZLF1_EBVA8|LYTIC switch protein BZLF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AGGGAGDPG 10
AGG A PG
Sbjct: 109 AGGEAPQPG 117
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 213 GAGKPG 218
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 4 GGAGDPG 10
GG G PG
Sbjct: 75 GGGGRPG 81
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 GAGDPG 10
GAG PG
Sbjct: 213 GAGKPG 218
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 207 GGKGDSG 213
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 206 GGKGDSG 212
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 205 GGKGDSG 211
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 MAGGGAGD 8
M GG AG+
Sbjct: 1558 MLGGSAGE 1565
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 MAGGGAGD 8
M GG AG+
Sbjct: 1558 MLGGSAGE 1565
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 MAGGGAGD 8
M GG AG+
Sbjct: 1558 MLGGSAGE 1565
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 MAGGGAGD 8
M GG AG+
Sbjct: 1558 MLGGSAGE 1565
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 MAGGGAGD 8
M GG AG+
Sbjct: 1558 MLGGSAGE 1565
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 207 GGKGDSG 213
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 205 GGKGDSG 211
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 4 GGAGDP 9
GG+G+P
Sbjct: 568 GGSGNP 573
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 4 GGAGDP 9
GG+G+P
Sbjct: 568 GGSGNP 573
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 207 GGKGDSG 213
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 GGGAGDPG 10
GG +GD G
Sbjct: 1533 GGTSGDRG 1540
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 GGGAGDPG 10
GG +GD G
Sbjct: 1533 GGTSGDRG 1540
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 GGGAGDPG 10
G G+GD G
Sbjct: 445 GNGSGDNG 452
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 MAGGGAGDP 9
+AGGG+ P
Sbjct: 776 LAGGGSDAP 784
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MAGGGAGDPG 10
+ GGG PG
Sbjct: 204 VTGGGGPRPG 213
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 AGGGAGDPG 10
A GG PG
Sbjct: 4 AAGGPASPG 12
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 AGGGAGDPG 10
A GG PG
Sbjct: 4 AAGGPASPG 12
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MAGGGAGDP 9
M GG GDP
Sbjct: 329 MTDGGGGDP 337
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MAGGGAGDP 9
M GG GDP
Sbjct: 334 MTDGGGGDP 342
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 210 GGRGDSG 216
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 210 GGRGDSG 216
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 4 GGAGDP 9
GG+G+P
Sbjct: 563 GGSGNP 568
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 MAGGGAGDP 9
M GG GDP
Sbjct: 367 MTDGGGGDP 375
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 GGAGDPG 10
GG GD G
Sbjct: 210 GGRGDSG 216
2|Sequence|6|15|AGDPGLGAAA
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GDPGLGAA 9
GDP LG A
Sbjct: 94 GDPSLGRA 101
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GDPGLGAA 9
GDP LG A
Sbjct: 94 GDPSLGRA 101
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GDPGLGAA 9
GDP LG A
Sbjct: 94 GDPSLGRA 101
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 GDPGLGA 8
G+PGLGA
Sbjct: 266 GNPGLGA 272
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 2 GDPGLGAAA 10
G PGLG AA
Sbjct: 46 GRPGLGTAA 54
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 GDPGLGA 8
G+PGLGA
Sbjct: 268 GNPGLGA 274
>sp|TAT_HV2CA|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 3 DPGLG 7
DPGLG
Sbjct: 128 DPGLG 132
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 DPGLG 7
DPGLG
Sbjct: 39 DPGLG 43
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 DPGLG 7
DPGLG
Sbjct: 1277 DPGLG 1281
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 DPGLG 7
DPGLG
Sbjct: 1277 DPGLG 1281
>sp|TAT_HV2SB|PROTEIN Tat|Human immunodeficiency virus type 2
Query: 2 GDPGLG 7
DPGLG
Sbjct: 124 ADPGLG 129
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 GDPGLGAA 9
GD G GAA
Sbjct: 198 GDIGFGAA 205
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 DPGLGA 8
+PGLGA
Sbjct: 262 NPGLGA 267
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 DPGLGA 8
+PGLGA
Sbjct: 262 NPGLGA 267
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 DPGLGA 8
+PGLGA
Sbjct: 262 NPGLGA 267
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 DPGLGA 8
+PGLGA
Sbjct: 262 NPGLGA 267
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 DPGLGA 8
+PGLGA
Sbjct: 262 NPGLGA 267
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 DPGLGA 8
+PGLGA
Sbjct: 262 NPGLGA 267
>sp|UL41_HCMVA|UNCHARACTERIZED protein UL41|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GDPGLGAA 9
GD GLG A
Sbjct: 90 GDHGLGKA 97
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GDPGLGAA 9
G PG G A
Sbjct: 292 GKPGCGGA 299
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GDPGLGAA 9
G PG G A
Sbjct: 292 GKPGCGGA 299
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AGDPGLG 7
+GD GLG
Sbjct: 204 SGDMGLG 210
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AGDPGLG 7
+GD GLG
Sbjct: 204 SGDMGLG 210
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 AGDPGLG 7
+GD GLG
Sbjct: 240 SGDMGLG 246
3|Sequence|11|20|LGAAAAPAPE
>sp|VE2_HPV50|REGULATORY protein E2|Human papillomavirus type 50
Query: 1 LGAAAAPAPE 10
LGA +AP PE
Sbjct: 277 LGADSAPTPE 286
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 LGAAAAPAPE 10
L + APAPE
Sbjct: 99 LALSGAPAPE 108
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 GAAAAPAP 9
GAAA+PAP
Sbjct: 96 GAAASPAP 103
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 1 LGAAAAPAP 9
LG+ +AP P
Sbjct: 279 LGSDSAPTP 287
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 2 GAAAAPAPE 10
GA +APAPE
Sbjct: 255 GAESAPAPE 263
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 LGAAAAPAPE 10
L + AP PE
Sbjct: 99 LALSGAPVPE 108
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 1 LGAAAAPAP 9
LGA + P P
Sbjct: 28 LGATSQPPP 36
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 2 GAAAAPAPE 10
G APAP+
Sbjct: 234 GEPVAPAPK 242
4|Sequence|16|25|APAPETREHL
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 APAPETREHL 10
AP PE+RE L
Sbjct: 725 APKPESRESL 734
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 APAPETREHL 10
AP P++RE L
Sbjct: 725 APKPDSRESL 734
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 APAPETREH 9
+P+P +R H
Sbjct: 92 SPSPGSRRH 100
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 APAPETREH 9
+P+P +R H
Sbjct: 92 SPSPGSRRH 100
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 APAPETREH 9
+P+P +R H
Sbjct: 92 SPSPGSRRH 100
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 APAPETREH 9
+P+P +R H
Sbjct: 92 SPSPGSRRH 100
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 APAPETREH 9
+P+P +R H
Sbjct: 92 SPSPGSRRH 100
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 APAPETREH 9
AP P TR++
Sbjct: 754 APKPATRKY 762
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 APAPETRE 8
AP PE R+
Sbjct: 728 APVPEKRD 735
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 PAPET 6
PAPET
Sbjct: 237 PAPET 241
>sp|PG139_VARV|VIRION membrane protein OPG139|Variola virus
Query: 2 PAPETR 7
P PETR
Sbjct: 39 PPPETR 44
>sp|PG139_VAR67|VIRION membrane protein OPG139|Variola virus (isolate
Query: 2 PAPETR 7
P PETR
Sbjct: 39 PPPETR 44
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 APAPETRE 8
APAPE ++
Sbjct: 432 APAPEKKD 439
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 PETRE 8
PETRE
Sbjct: 269 PETRE 273
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 APAPETR 7
AP P+TR
Sbjct: 722 APIPKTR 728
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 APAPETRE 8
AP P TR+
Sbjct: 717 APIPTTRD 724
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 APAPETR 7
AP+PET+
Sbjct: 418 APSPETQ 424
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 APAPETR 7
AP+PET+
Sbjct: 418 APSPETQ 424
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 2 PAPETRE 8
P PETR+
Sbjct: 231 PLPETRD 237
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 APAPETREH 9
AP REH
Sbjct: 181 APTNSVREH 189
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 2 PAPETREHL 10
P P TR H+
Sbjct: 43 PNPTTRYHM 51
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 APAPETREH 9
AP REH
Sbjct: 181 APTNSVREH 189
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PAPETREH 9
PAP R+H
Sbjct: 607 PAPVYRDH 614
5|Sequence|21|30|TREHLFKVLV
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 TREHLFKVLV 10
TRE L+K +V
Sbjct: 2051 TREQLYKTIV 2060
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 TREHLFKVLV 10
TRE L+K +V
Sbjct: 2051 TREQLYKTIV 2060
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 TREHLFKVLV 10
TRE L+K +V
Sbjct: 2051 TREQLYKTIV 2060
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 TREHLFKVLV 10
TRE L+K +V
Sbjct: 2051 TREQLYKTIV 2060
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 TREHLFKVLV 10
TRE L+K ++
Sbjct: 2051 TREQLYKTII 2060
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 1 TREHLFKVLV 10
T HLFK+++
Sbjct: 86 TSSHLFKLVI 95
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 TREHLFKVL 9
TR+ +FK+L
Sbjct: 795 TRKDIFKIL 803
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate
Query: 1 TREHLFKVLV 10
T HLFK+++
Sbjct: 46 TSSHLFKLVI 55
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 2 REHLFKVL 9
+ HL+K+L
Sbjct: 420 QAHLYKIL 427
6|Sequence|26|35|FKVLVIGELG
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 FKVLVIGELG 10
+K+ VIG G
Sbjct: 712 YKIAVIGVFG 721
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 FKVLVIGEL 9
+KV ++GEL
Sbjct: 641 YKVGLVGEL 649
7|Sequence|31|40|IGELGVGKTS
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 GELGVGKTS 10
G GVGKTS
Sbjct: 185 GGTGVGKTS 193
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 GELGVGKTS 10
G GVGKTS
Sbjct: 185 GGTGVGKTS 193
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 GELGVGKTS 10
G GVGKTS
Sbjct: 185 GGTGVGKTS 193
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GELGVGKTS 10
G GVGKTS
Sbjct: 185 GGTGVGKTS 193
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GELGVGKTS 10
G GVGKTS
Sbjct: 185 GGTGVGKTS 193
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 GELGVGKTS 10
G GVGKTS
Sbjct: 185 GGTGVGKTS 193
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 GELGVGKTS 10
GE+ VG TS
Sbjct: 734 GEVAVGNTS 742
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GELGVGKTS 10
G G+GKT+
Sbjct: 19 GAYGIGKTT 27
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GELGVGKTS 10
G G+GKT+
Sbjct: 19 GAYGIGKTT 27
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 2 GELGVGKT 9
G LGVG T
Sbjct: 110 GPLGVGST 117
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 GELGVGKT 9
G LGVG T
Sbjct: 110 GPLGVGST 117
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 GELGVGKTS 10
G +GVGK++
Sbjct: 260 GVMGVGKST 268
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GELGVGKTS 10
G GVGKT+
Sbjct: 291 GAPGVGKTT 299
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GELGVGKTS 10
G GVGKT+
Sbjct: 291 GAPGVGKTT 299
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GELGVGKTS 10
G GVGKT+
Sbjct: 291 GAPGVGKTT 299
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 2 GELGVGKTS 10
G G GKTS
Sbjct: 90 GTAGAGKTS 98
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GELGVGKTS 10
G G GKTS
Sbjct: 120 GTAGAGKTS 128
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GELGVGKTS 10
G G GKTS
Sbjct: 120 GTAGAGKTS 128
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 2 GELGVGKTS 10
G GVGKT+
Sbjct: 56 GPHGVGKTT 64
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 2 GELGVGKTS 10
G GVGKT+
Sbjct: 56 GPHGVGKTT 64
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 ELGVGK 8
ELGVG+
Sbjct: 598 ELGVGR 603
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 ELGVGK 8
ELGVG+
Sbjct: 598 ELGVGR 603
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 LGVGKTS 10
LGVGK++
Sbjct: 94 LGVGKST 100
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 4 LGVGKTS 10
LGVGK++
Sbjct: 94 LGVGKSA 100
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 GVGKTS 10
G+GKTS
Sbjct: 2169 GIGKTS 2174
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 GVGKTS 10
G+GKTS
Sbjct: 2169 GIGKTS 2174
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 GVGKTS 10
G+GKTS
Sbjct: 2169 GIGKTS 2174
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 GVGKTS 10
G+GKTS
Sbjct: 2169 GIGKTS 2174
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 GELGVGKTS 10
G+L +GK S
Sbjct: 395 GQLNLGKCS 403
8|Sequence|36|45|VGKTSIIKRY
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 VGKTSIIKRY 10
+ KTSIIK +
Sbjct: 2070 IPKTSIIKVF 2079
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GKTSIIKR 9
GK I+KR
Sbjct: 878 GKVGILKR 885
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGKTSI 6
+GKTSI
Sbjct: 2170 IGKTSI 2175
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VGKTSI 6
+GKTSI
Sbjct: 2170 IGKTSI 2175
9|Sequence|41|50|IIKRYVHQLF
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 IKRYVHQL 9
IK+Y+HQL
Sbjct: 1785 IKQYLHQL 1792
Query: 5 YVHQLF 10
YVHQLF
Sbjct: 145 YVHQLF 150
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 IKRYVHQL 9
IK+Y+HQL
Sbjct: 1785 IKQYLHQL 1792
Query: 5 YVHQLF 10
YVHQLF
Sbjct: 145 YVHQLF 150
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 IIKRYVHQ 8
++KR++H+
Sbjct: 5491 VVKRFIHK 5498
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 3 KRYVHQLF 10
KRY QLF
Sbjct: 109 KRYRRQLF 116
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 IKRYVHQ 8
I RYVH+
Sbjct: 53 ITRYVHR 59
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 IKRYVHQ 8
I RYVH+
Sbjct: 53 ITRYVHR 59
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 2 IKRYVHQL 9
IK YV+QL
Sbjct: 111 IKEYVYQL 118
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IKRYVHQL 9
IK YV+QL
Sbjct: 111 IKEYVYQL 118
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 2 IKRYVHQL 9
IK YV+QL
Sbjct: 114 IKEYVYQL 121
>sp|UL120_HCMVA|UNCHARACTERIZED protein UL120|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 KRYVHQL 9
K Y HQL
Sbjct: 94 KNYTHQL 100
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IKRYVHQL 9
IK YV+QL
Sbjct: 111 IKEYVYQL 118
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IKRYVHQLF 10
++ YVH++
Sbjct: 1778 VRNYVHRIL 1786
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IKRYVHQLF 10
++ YVH++
Sbjct: 1778 VRNYVHRIL 1786
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IKRYVHQLF 10
++ YVH++
Sbjct: 1778 VRNYVHRIL 1786
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 2 IKRYVHQ 8
+ RY+HQ
Sbjct: 169 LARYIHQ 175
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IKRYVHQLF 10
++ YVH++
Sbjct: 1778 VRNYVHRIL 1786
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 IKRYVHQLF 10
++ YVH++
Sbjct: 1778 VRNYVHRIL 1786
10|Sequence|46|55|VHQLFSQHYR
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 QLFSQHYR 10
Q+F QHY+
Sbjct: 2485 QVFDQHYQ 2492
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 QLFSQHYR 10
Q+F QHY+
Sbjct: 2486 QVFDQHYQ 2493
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 3 QLFSQHY 9
QLF++HY
Sbjct: 253 QLFARHY 259
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 QLFSQHY 9
QLF++HY
Sbjct: 288 QLFARHY 294
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 3 QLFSQHY 9
QLF++HY
Sbjct: 261 QLFARHY 267
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 HQLFSQHYR 10
H++ ++HY+
Sbjct: 495 HEIITEHYK 503
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 QLFSQHY 9
Q+F++HY
Sbjct: 253 QIFARHY 259
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 QLFSQHY 9
Q+F++HY
Sbjct: 253 QIFARHY 259
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 252 QLFTRHF 258
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 254 QLFARHF 260
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 254 QLFARHF 260
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 254 QLFARHF 260
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 253 QLFARHF 259
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 253 QLFARHF 259
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 281 QLFARHF 287
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 281 QLFARHF 287
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 253 QLFARHF 259
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 254 QLFARHF 260
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VHQLFSQ 7
+HQLFS+
Sbjct: 217 IHQLFSE 223
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 1 VHQLFSQ 7
+HQLFS+
Sbjct: 217 IHQLFSE 223
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 281 QLFARHF 287
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 252 QLFARHF 258
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 VHQLFSQHY 9
+H + + HY
Sbjct: 2326 IHHMITTHY 2334
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LFSQHYR 10
LFS H+R
Sbjct: 766 LFSYHHR 772
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 3 QLFSQHY 9
QLF++H+
Sbjct: 315 QLFARHF 321
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 5 FSQHYR 10
FS+HY+
Sbjct: 2176 FSKHYK 2181
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 4 LFSQHY 9
LFSQ+Y
Sbjct: 215 LFSQNY 220
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VHQLFSQHY 9
+H+L+ +HY
Sbjct: 16 LHELYLKHY 24
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VHQLFSQHY 9
+H+L+ +HY
Sbjct: 16 LHELYLKHY 24
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VHQLFSQHY 9
+H+L+ +HY
Sbjct: 16 LHELYLKHY 24
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 LFSQHY 9
LFSQ+Y
Sbjct: 216 LFSQNY 221
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 LFSQHY 9
LFSQ+Y
Sbjct: 215 LFSQNY 220
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LFSQHY 9
LFSQ+Y
Sbjct: 216 LFSQNY 221
11|Sequence|51|60|SQHYRATIGV
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SQHYRATIGV 10
++HYRA GV
Sbjct: 2985 NEHYRALSGV 2994
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SQHYRATIGV 10
++HYRA GV
Sbjct: 2985 NEHYRALSGV 2994
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 HYRAT 7
HYRAT
Sbjct: 1775 HYRAT 1779
>sp|PHOSP_RABVD|PHOSPHOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 QHYRATIGV 10
QHY +GV
Sbjct: 94 QHYLDNVGV 102
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 2 QHYRATIGV 10
+ YR +IGV
Sbjct: 90 EDYRGSIGV 98
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 QHYRATI 8
+HY AT+
Sbjct: 258 KHYHATL 264
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 2 QHYRATIGV 10
+ YR IGV
Sbjct: 86 EDYRGNIGV 94
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 2 QHYRATIGV 10
+ YR IGV
Sbjct: 86 EDYRGNIGV 94
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 2 QHYRATIGV 10
+ YR IGV
Sbjct: 86 EDYRGNIGV 94
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 2 QHYRATIGV 10
+ YR IGV
Sbjct: 86 EDYRGNIGV 94
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 HYRATIG 9
HY ATI
Sbjct: 975 HYTATIA 981
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 2 QHYRATIGV 10
+ YR IGV
Sbjct: 86 EDYRGNIGV 94
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 2 QHYRATIGV 10
+ YR IGV
Sbjct: 86 EDYRGNIGV 94
12|Sequence|56|65|ATIGVDFALK
>sp|E434_ADE40|EARLY E4 34 kDa protein|Human adenovirus F serotype 40
Query: 1 ATIGVDF 7
ATI VDF
Sbjct: 95 ATINVDF 101
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ATIGVDFALK 10
AT+G+ ALK
Sbjct: 120 ATLGLQSALK 129
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 ATIGVDFALK 10
AT+G+ ALK
Sbjct: 120 ATLGLQSALK 129
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 1 ATIGVDFALK 10
+ +D+ALK
Sbjct: 17 GNLNIDYALK 26
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 1 ATIGVDFALK 10
+ +D+ALK
Sbjct: 17 GNLNIDYALK 26
13|Sequence|61|70|DFALKVLNWD
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 DFALKVLNW 9
DFAL+V +W
Sbjct: 30 DFALEVTDW 38
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 DFALKVLNW 9
DFAL+V +W
Sbjct: 30 DFALEVTDW 38
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 DFALKVLNW 9
+FAL+VL W
Sbjct: 647 EFALRVLAW 655
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 DFALKVLNW 9
+FAL+VL W
Sbjct: 647 EFALRVLAW 655
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 DFALKVLNW 9
DFAL+ NW
Sbjct: 268 DFALRHNNW 276
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FALKVLNW 9
+ALK +NW
Sbjct: 302 YALKCVNW 309
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 3 ALKVLNW 9
ALK +NW
Sbjct: 303 ALKCVNW 309
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DFALKVLN 8
DF L +LN
Sbjct: 659 DFVLSILN 666
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 DFALKVLN 8
DF L +LN
Sbjct: 659 DFVLSILN 666
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 DFALKVL 7
DF +KVL
Sbjct: 2686 DFCIKVL 2692
14|Sequence|66|75|VLNWDSRTLV
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 VLNWDSRTLV 10
V++W+S TL+
Sbjct: 1957 VVDWESATLI 1966
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 VLNWDSRTLV 10
V++W+S TL+
Sbjct: 1957 VVDWESATLI 1966
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 VLNWDSRTLV 10
V++W+S TL+
Sbjct: 1957 VVDWESATLI 1966
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 VLNWDSRTLV 10
V++W+S TL+
Sbjct: 1955 VVDWESATLI 1964
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 VLNWDSRTLV 10
V++W++ TL+
Sbjct: 1958 VVDWETATLI 1967
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 VLNWDSRTLV 10
+LN D R ++
Sbjct: 673 ILNTDQRNMI 682
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 VLNWDSRTLV 10
+LN D R ++
Sbjct: 673 ILNTDQRNMI 682
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 VLNWDSRTLV 10
+LN D R ++
Sbjct: 673 ILNTDQRNMI 682
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 VLNWDSRTLV 10
+LN D R ++
Sbjct: 673 ILNTDQRNMI 682
>sp|VP2_ROTHC|INNER capsid protein VP2|Rotavirus C (isolate RVC/Human/United
Query: 4 WDSRT 8
WDS+T
Sbjct: 322 WDSKT 326
15|Sequence|71|80|SRTLVRLQLW
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 SRTLVRLQLW 10
+RT RLQ+W
Sbjct: 119 TRTEFRLQIW 128
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 SRTLVRLQLW 10
+RT RLQ+W
Sbjct: 119 TRTESRLQIW 128
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 SRTLVRLQLW 10
+RT RLQ+W
Sbjct: 118 TRTESRLQIW 127
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 TLVRLQLW 10
TLVRL+ W
Sbjct: 3149 TLVRLEAW 3156
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SRTLVRLQL 9
S TLV+LQL
Sbjct: 1065 STTLVQLQL 1073
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SRTLVRLQL 9
S TLV+LQL
Sbjct: 1065 STTLVQLQL 1073
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 LVRLQLW 10
L+RL++W
Sbjct: 243 LIRLKIW 249
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 RTLVRLQL 9
RTL+RL++
Sbjct: 353 RTLIRLEM 360
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 RTLVRLQL 9
RTL+RL++
Sbjct: 353 RTLIRLEM 360
16|Sequence|76|85|RLQLWDIAGQ
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RLQLWDIA 8
+LQL+DIA
Sbjct: 552 KLQLFDIA 559
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RLQLWDIA 8
+LQL+DIA
Sbjct: 552 KLQLFDIA 559
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 RLQLWDIA 8
+LQL+DIA
Sbjct: 552 KLQLFDIA 559
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 3 QLWDIAG 9
Q+W+I+G
Sbjct: 501 QIWEISG 507
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 QLWDIAG 9
Q+W+I+G
Sbjct: 501 QIWEISG 507
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 QLWDIAG 9
Q+W+I+G
Sbjct: 501 QIWEISG 507
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 3 QLWDIAG 9
Q+W+I+G
Sbjct: 501 QIWEISG 507
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 3 QLWDIAG 9
Q+W+I+G
Sbjct: 503 QIWEISG 509
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 RLQLWDIA 8
RLQ+W A
Sbjct: 124 RLQIWRYA 131
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 RLQLWDIA 8
RLQ+W A
Sbjct: 123 RLQIWRYA 130
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 RLQLWDIA 8
RLQ+W A
Sbjct: 124 RLQIWRYA 131
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 1 RLQLW 5
RLQ+W
Sbjct: 155 RLQIW 159
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 RLQLW 5
RLQ+W
Sbjct: 155 RLQIW 159
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 2 LQLWDIA 8
L +WDI+
Sbjct: 413 LDIWDIS 419
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 1 RLQLWDIAGQ 10
+L W + GQ
Sbjct: 149 QLYFWAVGGQ 158
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 1 RLQLWDIAGQ 10
+L W + GQ
Sbjct: 158 QLYFWAVGGQ 167
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 1 RLQLWDIAGQ 10
+L W + GQ
Sbjct: 158 QLYFWAVGGQ 167
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 1 RLQLWDIAGQ 10
+L W + GQ
Sbjct: 158 QLYFWAVGGQ 167
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 2 LQLWDIA 8
+++WD+A
Sbjct: 157 VRIWDVA 163
17|Sequence|81|90|DIAGQERFGN
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 5 QERFGN 10
QERF N
Sbjct: 461 QERFSN 466
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 DIAGQERFGN 10
D AG+E F +
Sbjct: 910 DDAGEENFSS 919
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DIAGQERFGN 10
D AG+E F +
Sbjct: 910 DDAGEENFSS 919
18|Sequence|86|95|ERFGNMTRVY
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 ERFGNMTRVY 10
E+ GNM+R +
Sbjct: 230 EKVGNMSRCW 239
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERFGNMTRVY 10
E+FGN T V+
Sbjct: 351 EQFGNKTIVF 360
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 RFGNMTRVY 10
R+G TR+Y
Sbjct: 1310 RYGRRTRLY 1318
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 GNMTRV 9
GNMTR+
Sbjct: 2243 GNMTRI 2248
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 3 FGNMTRVY 10
FGN++R++
Sbjct: 204 FGNVSRIF 211
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 FGNMTRVY 10
FGN+T V+
Sbjct: 2267 FGNITSVH 2274
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 FGNMTRVY 10
FGN+T V+
Sbjct: 2294 FGNITSVH 2301
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 FGNMTRVY 10
FGN+T V+
Sbjct: 2274 FGNITSVH 2281
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 FGNMTRVY 10
FGN+T V+
Sbjct: 2271 FGNITSVH 2278
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2237 EMGGNITRV 2245
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2240 EMGGNITRV 2248
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2241 EMGGNITRV 2249
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ERFGNMTRV 9
E GN+TRV
Sbjct: 2236 EMGGNITRV 2244
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 GNMTRV 9
GN+TRV
Sbjct: 2241 GNITRV 2246
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 GNMTRV 9
GN+TRV
Sbjct: 2237 GNITRV 2242
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 GNMTRV 9
GN+TRV
Sbjct: 2240 GNITRV 2245
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 GNMTRV 9
GN+TRV
Sbjct: 2240 GNITRV 2245
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 1 ERFGNMTRVY 10
ERF M ++Y
Sbjct: 317 ERFPLMAKIY 326
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERFGNMT 7
E+FGN T
Sbjct: 361 EQFGNKT 367
>sp|PG069_VAR67|TRUNCATED protein OPG069|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 GNMTRVY 10
GN+TR++
Sbjct: 40 GNVTRIF 46
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 1 ERFGNMTRVY 10
E+F M ++Y
Sbjct: 317 EKFSLMAKIY 326
19|Sequence|91|100|MTRVYYKEAV
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 MTRVYYK 7
MTR+Y+K
Sbjct: 799 MTRIYHK 805
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 RVYYKEA 9
RVYY+E
Sbjct: 1392 RVYYREG 1398
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1372 RVYYRDS 1378
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1381 RVYYRDS 1387
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1366 RVYYRDS 1372
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1364 RVYYRDS 1370
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1368 RVYYRDS 1374
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1370 RVYYRDS 1376
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1372 RVYYRDS 1378
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1377 RVYYRDS 1383
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1375 RVYYRDS 1381
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1370 RVYYRDS 1376
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1366 RVYYRDS 1372
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1367 RVYYRDS 1373
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1366 RVYYRDS 1372
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1366 RVYYRDS 1372
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1372 RVYYRDS 1378
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1369 RVYYRDS 1375
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1368 RVYYRDS 1374
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1383 RVYYRDS 1389
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1368 RVYYRDS 1374
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1383 RVYYRDS 1389
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1372 RVYYRDS 1378
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1383 RVYYRDS 1389
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 1371 RVYYRDS 1377
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 VYYKEA 9
V+YKEA
Sbjct: 2639 VFYKEA 2644
>sp|NSS_PUUMG|NON-STRUCTURAL protein NS-S|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 MTRVYYKE 8
+TR +YK+
Sbjct: 26 LTRAHYKQ 33
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKE 8
RVYY++
Sbjct: 1375 RVYYRD 1380
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKE 8
RVYY++
Sbjct: 1373 RVYYRD 1378
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKE 8
RVYY++
Sbjct: 1376 RVYYRD 1381
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 RVYYKEA 9
RVYY+++
Sbjct: 84 RVYYRDS 90
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 MTRVYYK 7
+TR+Y+K
Sbjct: 801 VTRIYHK 807
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1173 VYVKEAI 1179
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 4 VYYKEAV 10
VY KEA+
Sbjct: 1337 VYVKEAI 1343
20|Sequence|96|105|YKEAVGAFVV
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 YKEAVGAFVV 10
Y EA AF+V
Sbjct: 41 YTEASSAFIV 50
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 YKEAVGA 7
YKE VG+
Sbjct: 1124 YKEQVGS 1130
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 YKEAVGA 7
YKE VG+
Sbjct: 1121 YKEQVGS 1127
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 YKEAVGA 7
YKE VG+
Sbjct: 1120 YKEQVGS 1126
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 YKEAVGA 7
YKE VG+
Sbjct: 1110 YKEQVGS 1116
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 YKEAVGA 7
YKE VG+
Sbjct: 1120 YKEQVGS 1126
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 YKEAVG 6
Y+EA+G
Sbjct: 269 YREAIG 274
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 YKEAVG 6
Y+EA+G
Sbjct: 261 YREAIG 266
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 YKEAVG 6
Y+EA+G
Sbjct: 261 YREAIG 266
>sp|UL24_HHV8P|PROTEIN UL24 homolog|Human herpesvirus 8 type P
Query: 1 YKEAVGAF 8
Y E+ GAF
Sbjct: 154 YSESPGAF 161
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 EAVGAFV 9
EA+G FV
Sbjct: 3452 EAIGIFV 3458
>sp|SPIKE_ADE15|FIBER protein|Human adenovirus D serotype 15
Query: 1 YKEAVG 6
YK+AVG
Sbjct: 278 YKKAVG 283
21|Sequence|101|110|GAFVVFDISR
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 GAFVVFD 7
G F+VFD
Sbjct: 2325 GGFIVFD 2331
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GAFVVFDISR 10
GA+ +FD+S+
Sbjct: 7093 GAYSLFDMSK 7102
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FVVFDISR 10
F FD+SR
Sbjct: 300 FFYFDVSR 307
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FVVFDISR 10
F FD+SR
Sbjct: 300 FFYFDVSR 307
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 VVFDISR 10
VVFDI++
Sbjct: 888 VVFDITK 894
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 VVFDISR 10
VVFDI++
Sbjct: 888 VVFDITK 894
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 VVFDISR 10
VVFDI++
Sbjct: 888 VVFDITK 894
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 GAFVVFDISR 10
GA+ +FD+++
Sbjct: 7036 GAYSLFDMAK 7045
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GAFVVFDISR 10
GA+ +FD+++
Sbjct: 7073 GAYSLFDMTK 7082
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GAFVVFDISR 10
GA+ +FD+++
Sbjct: 7123 GAYSLFDMTK 7132
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 VFDISR 10
+FD+SR
Sbjct: 650 IFDVSR 655
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 VFDISR 10
+FD+SR
Sbjct: 650 IFDVSR 655
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 5 VFDISR 10
+FD+SR
Sbjct: 650 IFDVSR 655
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 5 VFDISR 10
+FD+SR
Sbjct: 658 IFDVSR 663
>sp|YVEE_VACCC|UNCHARACTERIZED 7.6 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GAFVVFDI 8
GAF +F+I
Sbjct: 58 GAFSIFNI 65
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 2 AFVVFDISR 10
+FVV D+S+
Sbjct: 1086 SFVVQDVSK 1094
22|Sequence|106|115|FDISRSSTFE
>sp|PROF_VARV|PROFILIN virus
Query: 2 DISRSSTFE 10
DIS+++ FE
Sbjct: 10 DISKNNNFE 18
>sp|PROF_VAR67|PROFILIN virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DISRSSTFE 10
DIS+++ FE
Sbjct: 10 DISKNNNFE 18
23|Sequence|111|120|SSTFEAVLKW
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SSTFEAVLKW 10
SS F+A KW
Sbjct: 186 SSKFKAFCKW 195
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 SSTFEAVLKW 10
SS F+A KW
Sbjct: 186 SSKFKAFCKW 195
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 SSTFEAVLKW 10
SS F+A KW
Sbjct: 186 SSKFKAFCKW 195
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 3 TFEAVLK 9
TFEAVL+
Sbjct: 518 TFEAVLR 524
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 2 STFEAVLKW 10
STF VL W
Sbjct: 159 STFAKVLAW 167
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 STFEAVLKW 10
S+F A +KW
Sbjct: 152 SSFYAEMKW 160
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 STFEAVLK 9
ST++AVL+
Sbjct: 975 STYQAVLR 982
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SSTFEAVLKW 10
S+ EAVL W
Sbjct: 527 SAVREAVLTW 536
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 SSTFEAVLKW 10
+S FE+ ++W
Sbjct: 320 TSPFESYVRW 329
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 TFEAVLKW 10
T+E +KW
Sbjct: 1289 TYEYYVKW 1296
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 3 TFEAVLKW 10
T+E +KW
Sbjct: 1287 TYEMYVKW 1294
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 3 TFEAVLKW 10
T+E +KW
Sbjct: 1287 TYEMYVKW 1294
24|Sequence|116|125|AVLKWKSDLD
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 3 LKWKSD 8
LKWKSD
Sbjct: 166 LKWKSD 171
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 3 LKWKSD 8
LKWKSD
Sbjct: 166 LKWKSD 171
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 AVLKWK 6
AVLKWK
Sbjct: 2 AVLKWK 7
>sp|VE8E2_HPV11|PROTEIN E8^E2C|Human papillomavirus 11
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 KWKSDL 9
KWKSD+
Sbjct: 115 KWKSDM 120
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VLKWKSD 8
VLKWK D
Sbjct: 181 VLKWKFD 187
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|VE8E2_HPV35|PROTEIN E8^E2C|Human papillomavirus 35
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 VLKWKSD 8
V KWKSD
Sbjct: 814 VEKWKSD 820
>sp|VE8E2_HPV33|PROTEIN E8^E2C|Human papillomavirus 33
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 VLKWKSDLD 10
V W SD D
Sbjct: 227 VFSWYSDFD 235
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 VLKWKSDLD 10
V W SD D
Sbjct: 227 VFSWYSDFD 235
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VLKWKSD 8
VLKWK D
Sbjct: 183 VLKWKFD 189
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VLKWKSD 8
VLKWK D
Sbjct: 180 VLKWKFD 186
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 4 KWKSDL 9
KWK+D+
Sbjct: 115 KWKTDM 120
>sp|CAHH_MONPZ|CELL surface-binding protein OPG105|Monkeypox virus (strain
Query: 3 LKWKSDL 9
+KW SDL
Sbjct: 252 MKWLSDL 258
>sp|CAHH_MONPV|CELL surface-binding protein OPG105|Monkeypox virus (MPXV)
Query: 3 LKWKSDL 9
+KW SDL
Sbjct: 252 MKWLSDL 258
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VLKWKSDLD 10
V W SD D
Sbjct: 227 VFSWYSDFD 235
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VLKWKSD 8
VL WKSD
Sbjct: 182 VLVWKSD 188
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 VLKWKSD 8
VLKWK D
Sbjct: 178 VLKWKFD 184
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 4 KWKSDL 9
KWK+D+
Sbjct: 119 KWKADM 124
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AVLKWKSDLD 10
+L W+ DLD
Sbjct: 89 GLLFWRLDLD 98
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 KWKSDL 9
KWK+D+
Sbjct: 115 KWKADM 120
>sp|VE4_HPV65|PROTEIN E4|Human papillomavirus 65
Query: 4 KWKSDLD 10
KW+SD++
Sbjct: 100 KWESDIE 106
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 4 KWKSDL 9
KWK+D+
Sbjct: 115 KWKADM 120
>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58
Query: 1 AVLKWK 6
A+LKWK
Sbjct: 2 AILKWK 7
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 AVLKW 5
AVLKW
Sbjct: 1271 AVLKW 1275
>sp|CAHH_VACCT|CELL surface-binding protein OPG105|Vaccinia virus (strain Tian Tan)
Query: 3 LKWKSDL 9
++W SDL
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VARV|CELL surface-binding protein OPG105|Variola virus
Query: 3 LKWKSDL 9
++W SDL
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VAR67|CELL surface-binding protein OPG105|Variola virus (isolate
Query: 3 LKWKSDL 9
++W SDL
Sbjct: 252 MRWLSDL 258
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 AVLKW 5
AVLKW
Sbjct: 1271 AVLKW 1275
>sp|CAHH_VACCA|CELL surface-binding protein OPG105|Vaccinia virus (strain Ankara)
Query: 3 LKWKSDL 9
++W SDL
Sbjct: 252 MRWLSDL 258
>sp|CAHH_VACCC|CELL surface-binding protein OPG105|Vaccinia virus (strain Copenhagen)
Query: 3 LKWKSDL 9
++W SDL
Sbjct: 252 MRWLSDL 258
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 5 WKSDLD 10
W +DLD
Sbjct: 526 WMNDLD 531
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 1 AVLKWK 6
AVLKW+
Sbjct: 231 AVLKWR 236
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 4 KWKSD 8
KWK D
Sbjct: 357 KWKKD 361
25|Sequence|121|130|KSDLDSKVHL
>sp|VE4_HPV1|PROTEIN E4|Human papillomavirus type 1 (Human
Query: 1 KSDLDSKVHL 10
+SD DS+ HL
Sbjct: 48 RSDKDSRKHL 57
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 KSDLDSKVHL 10
K D++S +HL
Sbjct: 333 KEDVESALHL 342
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 KSDLDSKVH 9
KSD+ SK+
Sbjct: 1080 KSDMGSKIQ 1088
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 KSDLDSKVH 9
KSD+ SK+
Sbjct: 1080 KSDMGSKIQ 1088
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KSDLDSKVHL 10
K D+ KVHL
Sbjct: 273 KGDITYKVHL 282
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 KSDLDSKVHL 10
K D+ KVHL
Sbjct: 273 KGDITYKVHL 282
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 KSDLDSKVHL 10
K D+ KVHL
Sbjct: 273 KGDITYKVHL 282
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 KSDLDSKVHL 10
K D+ KVHL
Sbjct: 273 KGDITYKVHL 282
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 KSDLDSKVHL 10
K D+ KVHL
Sbjct: 273 KGDITYKVHL 282
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 KSDLDSKVHL 10
K D+ KVHL
Sbjct: 273 KGDITYKVHL 282
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 1 KSDLDSKVHL 10
K D+D VH+
Sbjct: 22 KYDVDDNVHI 31
26|Sequence|126|135|SKVHLPNGSP
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 SKVHLPNGSP 10
S V LPNG P
Sbjct: 300 SAVSLPNGEP 309
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 SKVHLPNGSP 10
S V LP+GSP
Sbjct: 329 SAVSLPHGSP 338
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 SKVHLPNGSP 10
S V LP+GSP
Sbjct: 329 SAVSLPHGSP 338
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 VHLPNG 8
+HLPNG
Sbjct: 2002 IHLPNG 2007
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 VHLPNG 8
+HLPNG
Sbjct: 2002 IHLPNG 2007
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 4 HLPNGSP 10
HLP G+P
Sbjct: 466 HLPTGTP 472
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 SKVHLPNG 8
++VHLP G
Sbjct: 364 TRVHLPKG 371
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 IRLPNGPP 275
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 IKLPNGPP 275
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 VHLPNG 8
+H+PNG
Sbjct: 2003 IHMPNG 2008
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 VHLPNG 8
+H+PNG
Sbjct: 2003 IHMPNG 2008
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 VHLPNG 8
+H+PNG
Sbjct: 2003 IHMPNG 2008
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 VHLPNG 8
+H+PNG
Sbjct: 2003 IHMPNG 2008
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 LRLPNGPP 275
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 LRLPNGPP 275
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 LRLPNGPP 275
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 LRLPNGPP 275
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 3 VHLPNGSP 10
+ LPNG P
Sbjct: 268 LRLPNGPP 275
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 4 HLPNG 8
HLPNG
Sbjct: 128 HLPNG 132
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2281 TSVHLPTGT 2289
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2268 TSVHLPTGT 2276
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2268 TSVHLPTGT 2276
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2278 TSVHLPTGT 2286
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2271 TSVHLPTGT 2279
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2275 TSVHLPTGT 2283
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 950 TSVHLPTGT 958
>sp|VE8E2_HPV57|PROTEIN E8^E2C|Human papillomavirus 57
Query: 1 SKVHLPNG 8
++VHLP G
Sbjct: 173 TRVHLPKG 180
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SKVHLPNGS 9
+ VHLP G+
Sbjct: 2298 TSVHLPTGT 2306
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 SKVHLPNGS 9
+ H+PNG+
Sbjct: 379 ASTHVPNGT 387
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KVHLPN 7
+VHLPN
Sbjct: 436 RVHLPN 441
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KVHLPN 7
+VHLPN
Sbjct: 436 RVHLPN 441
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 KVHLPN 7
+VHLPN
Sbjct: 436 RVHLPN 441
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 SKVHLPNGS 9
SK +LPNG+
Sbjct: 284 SKDNLPNGT 292
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 SKVHLPNGS 9
SK +LPNG+
Sbjct: 284 SKDNLPNGT 292
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 SKVHLPNGS 9
SK +LPNG+
Sbjct: 284 SKDNLPNGT 292
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 SKVHLPNGS 9
SK +LPNG+
Sbjct: 284 SKDNLPNGT 292
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 SKVHLPNGS 9
SK +LPNG+
Sbjct: 282 SKDNLPNGT 290
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 3 VHLPNGSP 10
+ LP+G P
Sbjct: 268 IRLPDGPP 275
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2314 SSCHLPTGT 2322
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2314 SSCHLPTGT 2322
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2315 SSCHLPTGT 2323
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2316 SSTHLPTGT 2324
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2230 SSCHLPTGT 2238
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2275 SSCHLPTGT 2283
>sp|PG195_VACCC|PROTEIN OPG195|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VHLPNGS 9
VHLP S
Sbjct: 52 VHLPTAS 58
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2314 SSTHLPTGT 2322
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SKVHLPNGS 9
S HLP G+
Sbjct: 2275 SSCHLPTGT 2283
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 LPNGSP 10
+PNG P
Sbjct: 628 IPNGPP 633
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VHLPNG 8
VHLP+G
Sbjct: 16 VHLPSG 21
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VHLPNG 8
VHLP+G
Sbjct: 16 VHLPSG 21
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 VHLPNG 8
VHLP+G
Sbjct: 16 VHLPSG 21
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 915 SKVNFPHG 922
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KVHLPNGSP 10
K HL +G P
Sbjct: 329 KAHLTSGQP 337
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KVHLPNGSP 10
K HL +G P
Sbjct: 329 KAHLTSGQP 337
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SKV+ P+G
Sbjct: 921 SKVNFPHG 928
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 3 VHLPNGS 9
VH P GS
Sbjct: 89 VHYPTGS 95
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 3 VHLPNGS 9
VH+P G+
Sbjct: 380 VHIPKGT 386
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 VHLPNGS 9
+HLP GS
Sbjct: 2028 LHLPPGS 2034
>sp|VP2_ROTYO|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 454 RMHYRNGDP 462
>sp|VP2_ROTWI|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 454 RMHYRNGDP 462
>sp|VP2_ROTHW|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 454 RMHYRNGDP 462
>sp|VP2_ROTHT|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 454 RMHYRNGDP 462
>sp|VP2_ROTHS|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 443 RMHYRNGDP 451
>sp|VP2_ROTHP|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 460 RMHYRNGDP 468
>sp|VP2_ROTHL|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 443 RMHYRNGDP 451
>sp|VP2_ROTHK|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 456 RMHYRNGDP 464
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 443 RMHYRNGDP 451
>sp|VP2_ROTH7|INNER capsid protein VP2|Rotavirus A (isolate RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 444 RMHYRNGDP 452
>sp|VP2_ROTH6|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 444 RMHYRNGDP 452
>sp|VP2_ROTH3|INNER capsid protein VP2|Rotavirus A (strain
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 451 RMHYRNGDP 459
>sp|VP2_ROTAD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 454 RMHYRNGDP 462
>sp|VP2_ROT41|INNER capsid protein VP2|Rotavirus A (isolate
Query: 2 KVHLPNGSP 10
++H NG P
Sbjct: 444 RMHYRNGDP 452
>sp|PORTL_HHV8P|PORTAL protein|Human herpesvirus 8 type P
Query: 4 HLPNGS 9
H+P+GS
Sbjct: 439 HIPSGS 444
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 SKVHLPNGS 9
SK +LPNG+
Sbjct: 284 SKDNLPNGT 292
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 SKVHLPNG 8
SK++ P+G
Sbjct: 921 SKINFPHG 928
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 HLPNGSP 10
HLP+G P
Sbjct: 282 HLPSGPP 288
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 HLPNGSP 10
HLP+G P
Sbjct: 316 HLPSGPP 322
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 VHLPNGSP 10
V PNG P
Sbjct: 825 VIFPNGKP 832
27|Sequence|131|140|PNGSPIPAVL
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 NGSPIPA 8
NG P+PA
Sbjct: 616 NGEPLPA 622
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 NGSPIPA 8
NG P+PA
Sbjct: 620 NGEPLPA 626
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 PNGSPIPA 8
P G PIPA
Sbjct: 716 PPGGPIPA 723
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 PNGSPIPAV 9
P+G P PA+
Sbjct: 2419 PDGDPKPAL 2427
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PNGSPIPA 8
P G+PIP+
Sbjct: 719 PPGAPIPS 726
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 PNGSPIP 7
P+GSP P
Sbjct: 334 PHGSPPP 340
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 PNGSPIP 7
P+GSP P
Sbjct: 334 PHGSPPP 340
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PNGSPIP 7
P G+PIP
Sbjct: 714 PPGAPIP 720
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PNGSPIPA 8
P G+PIP
Sbjct: 739 PPGAPIPG 746
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 PNGSPIPA 8
P G+PIP
Sbjct: 739 PPGAPIPG 746
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PNGSPIP 7
P G+PIP
Sbjct: 719 PPGAPIP 725
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PNGSPIPAVL 10
P SP+PA +
Sbjct: 403 PPESPVPATI 412
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PNGSPIPAVL 10
P SP+PA +
Sbjct: 403 PPESPVPATI 412
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 NGSPIPAVL 10
NG P PA+L
Sbjct: 332 NGCPFPALL 340
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 NGSPIPAVL 10
NG P PA+L
Sbjct: 332 NGCPFPALL 340
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 PNGSPIP 7
P G PIP
Sbjct: 716 PPGGPIP 722
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 NGSPIPAVL 10
NG P PA+L
Sbjct: 332 NGCPFPALL 340
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNGSPIPAVL 10
P SP+PA +
Sbjct: 403 PPESPVPATI 412
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 PNGSPIP 7
P G PIP
Sbjct: 717 PPGGPIP 723
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 2 NGSPIPAVL 10
NGS + AVL
Sbjct: 133 NGSEVSAVL 141
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 NGSPIPAVL 10
NGS + AVL
Sbjct: 133 NGSEVSAVL 141
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 PNGSPIP 7
P G PIP
Sbjct: 717 PPGGPIP 723
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 PNGSPIP 7
P G PIP
Sbjct: 717 PPGGPIP 723
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NGSPIPAVL 10
NGS + AVL
Sbjct: 133 NGSEVTAVL 141
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NGSPIPAVL 10
NGS + AVL
Sbjct: 133 NGSEVTAVL 141
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 PNGSPIP 7
P G PIP
Sbjct: 717 PPGGPIP 723
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 PNGSPIP 7
P G+P+P
Sbjct: 740 PPGAPVP 746
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 NGSPIP 7
NG P+P
Sbjct: 616 NGDPMP 621
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 PNGSPIP 7
P G+P+P
Sbjct: 740 PPGAPVP 746
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNGSPIPAV 9
P+G P+P +
Sbjct: 8 PSGPPLPVL 16
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PNGSPIPAV 9
P+G P+P +
Sbjct: 8 PSGPPLPVL 16
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PNGSPIP 7
P G+P+P
Sbjct: 714 PPGAPVP 720
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 PNGSPIPAV 9
P PIP+V
Sbjct: 767 PREQPIPSV 775
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 PNGSPIP 7
P G+PIP
Sbjct: 54 PQGNPIP 60
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 PNGSPIP 7
P G+PIP
Sbjct: 54 PQGNPIP 60
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 PNGSPIP 7
P G+P+P
Sbjct: 725 PPGAPVP 731
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 2 NGSPIPAVL 10
+GS +PA+L
Sbjct: 139 SGSEVPAIL 147
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PNGSPIPAV 9
P PIP+V
Sbjct: 782 PREQPIPSV 790
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 716 PPGGPVP 722
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 2 NGSPIP 7
+GSP+P
Sbjct: 102 SGSPVP 107
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 NGSPIP 7
NG P+P
Sbjct: 329 NGGPLP 334
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 NGSPIP 7
NG P+P
Sbjct: 329 NGGPLP 334
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 716 PPGGPVP 722
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 720 PPGGPVP 726
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 3 GSPIP 7
GSPIP
Sbjct: 449 GSPIP 453
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 716 PPGGPVP 722
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 2 NGSPIP 7
+GSP+P
Sbjct: 102 SGSPVP 107
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 714 PPGGPVP 720
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 715 PPGGPVP 721
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 715 PPGGPVP 721
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 715 PPGGPVP 721
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 PNGSPIP 7
P G P+P
Sbjct: 715 PPGGPVP 721
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 2 NGSPIPAV 9
NG+P+ A+
Sbjct: 590 NGNPVYAI 597
>sp|US9_HHV2H|ENVELOPE protein US9|Human herpesvirus 2 (strain HG52)
Query: 1 PNGSPIPA 8
P SP+PA
Sbjct: 21 PAASPVPA 28
28|Sequence|136|145|IPAVLLANKC
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 1 IPAVLLAN 8
IPA +LAN
Sbjct: 368 IPAEMLAN 375
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA ++AN
Sbjct: 368 IPAEMIAN 375
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 IPAVLLAN 8
IPA ++AN
Sbjct: 368 IPAEMIAN 375
29|Sequence|141|150|LANKCDQNKD
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 LANKCDQNK 9
A KCD N+
Sbjct: 1031 FATKCDNNR 1039
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LANKCDQNK 9
A KCD N+
Sbjct: 1057 FATKCDSNR 1065
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LANKCDQNK 9
A KCD N+
Sbjct: 1057 FATKCDSNR 1065
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 CDQNK 9
CDQNK
Sbjct: 507 CDQNK 511
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 LANKCDQN 8
L N+CD N
Sbjct: 164 LRNRCDSN 171
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 LANKCDQNK 9
A KCD N+
Sbjct: 1024 FAAKCDSNR 1032
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 ANKCDQNKD 10
A++CD N D
Sbjct: 448 ASECDLNDD 456
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 KCDQNKD 10
KC+QN D
Sbjct: 303 KCNQNHD 309
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 LANKCDQ 7
+AN+C Q
Sbjct: 90 IANRCQQ 96
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 1 LANKCDQNK 9
LAN+ QNK
Sbjct: 94 LANQAVQNK 102
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 1 LANKCDQNK 9
LAN+ QNK
Sbjct: 94 LANQAVQNK 102
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 LANKCDQ 7
LANK DQ
Sbjct: 206 LANKPDQ 212
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5033 LANECAQ 5039
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 4 KCDQNKD 10
KC+ N+D
Sbjct: 539 KCNPNED 545
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5047 LANECAQ 5053
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5024 LANECAQ 5030
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5020 LANECAQ 5026
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5058 LANECAQ 5064
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5078 LANECAQ 5084
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LANKCDQ 7
LAN+C Q
Sbjct: 5108 LANECAQ 5114
30|Sequence|146|155|DQNKDSSQSP
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 QNKDSSQSP 10
+NK +SQ P
Sbjct: 292 ENKKTSQKP 300
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DQNKDSSQSP 10
D NK+ + SP
Sbjct: 454 DNNKERAHSP 463
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DQNKDSSQSP 10
D NK+ + SP
Sbjct: 454 DNNKERAHSP 463
31|Sequence|151|160|SSQSPSQVDQ
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 SQSPSQVD 9
S+SP Q+D
Sbjct: 173 SESPGQLD 180
>sp|VP30_EBORR|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SQSPSQVDQ 10
S+ P+QVD+
Sbjct: 31 SRDPNQVDR 39
>sp|VP30_EBORE|TRANSCRIPTIONAL activator VP30|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SQSPSQVDQ 10
S+ P+QVD+
Sbjct: 31 SRDPNQVDR 39
32|Sequence|156|165|SQVDQFCKEH
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 3 VDQFCKE 9
+DQFC+E
Sbjct: 137 IDQFCEE 143
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 3 VDQFCKE 9
+DQFC+E
Sbjct: 137 IDQFCEE 143
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 3 VDQFCKE 9
+DQFC+E
Sbjct: 137 IDQFCEE 143
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 SQVDQFCKEH 10
SQ+DQ KEH
Sbjct: 1255 SQLDQVNKEH 1264
>sp|EV45_HHV23|ENVELOPE protein UL45|Human herpesvirus 2 (strain 333)
Query: 1 SQVDQFCKE 9
S +D+FC+E
Sbjct: 135 SGIDEFCEE 143
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 SQVDQFCKEH 10
SQ+DQ +EH
Sbjct: 1255 SQLDQVDREH 1264
>sp|VE6_HPV44|PROTEIN E6|Human papillomavirus 44
Query: 3 VDQFCKE 9
+DQ CKE
Sbjct: 13 IDQLCKE 19
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 SQVDQFCKEH 10
S ++ FCK H
Sbjct: 215 SAINNFCKGH 224
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 SQVDQFCKEH 10
S ++ FCK H
Sbjct: 215 SAINNFCKGH 224
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 SQVDQFCKEH 10
S ++ FCK H
Sbjct: 215 SAINNFCKGH 224
>sp|PG061_VARV|PROTEIN OPG061|Variola virus
Query: 1 SQVDQFCKE 9
SQ+D C E
Sbjct: 213 SQLDNLCTE 221
>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 SQVDQFCKE 9
SQ+D C E
Sbjct: 213 SQLDNLCTE 221
>sp|VE6_HPV13|PROTEIN E6|Human papillomavirus 13
Query: 3 VDQFCKE 9
+DQ CKE
Sbjct: 13 IDQLCKE 19
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 5 QFCKEH 10
+FCK+H
Sbjct: 2192 KFCKKH 2197
Query: 4 DQFCKEH 10
D FC+++
Sbjct: 665 DDFCRQY 671
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SQVDQFCKE 9
SQ+D C E
Sbjct: 213 SQLDNLCTE 221
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 QFCKEH 10
+FCK+H
Sbjct: 2192 KFCKKH 2197
Query: 4 DQFCKEH 10
D FC+++
Sbjct: 665 DDFCRQY 671
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 1 SQVDQFCKEH 10
+QVDQ KEH
Sbjct: 139 TQVDQQQKEH 148
>sp|PG061_VACCP|PROTEIN OPG061|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 SQVDQFCKE 9
SQ+D C E
Sbjct: 213 SQLDNVCTE 221
>sp|PP85_HCMVM|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VDQFCKEH 10
V++ C+EH
Sbjct: 399 VEEICEEH 406
>sp|PP85_HCMVA|PHOSPHOPROTEIN 85|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VDQFCKEH 10
V++ C+EH
Sbjct: 399 VEEICEEH 406
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 SQVDQFCK 8
SQV +CK
Sbjct: 517 SQVKYYCK 524
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 SQVDQFCKEH 10
SQVD EH
Sbjct: 204 SQVDGTVNEH 213
>sp|CEP2_HHV6U|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 FCKEH 10
FCK+H
Sbjct: 220 FCKDH 224
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 SQVDQFCK 8
SQV +CK
Sbjct: 517 SQVKYYCK 524
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 6 FCKEH 10
FCK+H
Sbjct: 215 FCKDH 219
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 6 FCKEH 10
FCK H
Sbjct: 2421 FCKTH 2425
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 VDQFCKEH 10
VD+F K H
Sbjct: 169 VDKFGKNH 176
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VDQFCKEH 10
VD+F K H
Sbjct: 195 VDKFGKNH 202
>sp|CEP2_HHV6Z|CYTOPLASMIC envelopment protein 2|Human herpesvirus 6B (strain Z29)
Query: 6 FCKEH 10
FCK+H
Sbjct: 220 FCKDH 224
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 6 FCKEH 10
FCK H
Sbjct: 2421 FCKTH 2425
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 3 VDQFCKEH 10
VD+F K H
Sbjct: 165 VDKFGKNH 172
33|Sequence|161|170|FCKEHGFAGW
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 FCKEHGFAGW 10
FC F GW
Sbjct: 566 FCSPDAFLGW 575
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 FCKEHGFAGW 10
FC+ HG G+
Sbjct: 167 FCRVHGLRGF 176
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 FCKEHGFAGW 10
FC+ HG G+
Sbjct: 167 FCRVHGLRGF 176
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 FCKEHGF 7
FCK+H F
Sbjct: 2193 FCKKHRF 2199
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 FCKEHGF 7
FCK+H F
Sbjct: 2193 FCKKHRF 2199
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CKEHGFAGW 10
CKEH G+
Sbjct: 877 CKEHPVVGY 885
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CKEHGFAGW 10
CKEH G+
Sbjct: 877 CKEHPVVGY 885
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CKEHGFAGW 10
CKEH G+
Sbjct: 877 CKEHPVVGY 885
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CKEHGFAGW 10
CKEH G+
Sbjct: 877 CKEHPVVGY 885
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CKEHGFAGW 10
C+ F+GW
Sbjct: 379 CRRPCFSGW 387
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CKEHGFAGW 10
C+ F+GW
Sbjct: 379 CRRPCFSGW 387
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CKEHGFAGW 10
C+ F+GW
Sbjct: 379 CRRPCFSGW 387
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 CKEHG 6
CK+HG
Sbjct: 197 CKQHG 201
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 2 CKEHG 6
CK+HG
Sbjct: 197 CKQHG 201
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 2 CKEHG 6
CK+HG
Sbjct: 197 CKQHG 201
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 FCKEHGFAG 9
F HGF G
Sbjct: 184 FISRHGFGG 192
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 2171 FCNKHNF 2177
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 2171 FCNKHNF 2177
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 FCKEHGF 7
+CKE G+
Sbjct: 1484 YCKERGW 1490
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 FCKEHGFAG 9
+C E G+ G
Sbjct: 1439 YCAEQGWIG 1447
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 315 FCADHPF 321
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 315 FCADHPF 321
>sp|SPI2_MONPV|SERINE proteinase inhibitor 2|Monkeypox virus (MPXV)
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 315 FCADHPF 321
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 312 FCADHPF 318
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FCKEHGFA 8
FC GFA
Sbjct: 212 FCAPAGFA 219
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 CKEHG 6
CK HG
Sbjct: 1000 CKRHG 1004
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 5 HGFAGW 10
HG GW
Sbjct: 324 HGVKGW 329
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 EHGFAGW 10
EH +A W
Sbjct: 902 EHSYALW 908
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EHGFAGW 10
EH +A W
Sbjct: 902 EHSYALW 908
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EHGFAGW 10
EH +A W
Sbjct: 902 EHSYALW 908
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 5 HGFAGW 10
HG GW
Sbjct: 347 HGVKGW 352
>sp|PRO_ADE02|PROTEASE adenovirus C serotype 2
Query: 5 HGFAGW 10
H FA W
Sbjct: 131 HAFANW 136
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 5 HGFAGW 10
H FA W
Sbjct: 131 HAFANW 136
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 KEHGF 7
K+HGF
Sbjct: 1215 KQHGF 1219
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 KEHGF 7
K+HGF
Sbjct: 1215 KQHGF 1219
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CAEHG 356
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 CKEHG 6
C EHG
Sbjct: 354 CDEHG 358
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 1 FCKEHGF 7
FC +H F
Sbjct: 192 FCVDHPF 198
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CKEHGFAGW 10
C H +A W
Sbjct: 821 CYRHPWAPW 829
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CKEHGFAGW 10
C H +A W
Sbjct: 804 CYRHPWAPW 812
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 CKEHG 6
C EHG
Sbjct: 351 CTEHG 355
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 CKEHG 6
C EHG
Sbjct: 351 CTEHG 355
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 EHGFAGW 10
+H FA W
Sbjct: 1981 DHDFAHW 1987
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CKEHG 6
C EHG
Sbjct: 351 CTEHG 355
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 CKEHG 6
C EHG
Sbjct: 354 CDEHG 358
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 CKEHG 6
C EHG
Sbjct: 354 CDEHG 358
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 347 CTEHG 351
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FCKEHGF 7
FC +GF
Sbjct: 228 FCTSYGF 234
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CKEHG 6
C EHG
Sbjct: 351 CTEHG 355
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CKEHG 6
C EHG
Sbjct: 351 CTEHG 355
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CKEHG 6
C EHG
Sbjct: 341 CAEHG 345
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FCKEHGF 7
FC +GF
Sbjct: 228 FCTSYGF 234
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 CKEHG 6
C EHG
Sbjct: 351 CTEHG 355
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CAEHG 356
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 CKEHG 6
C EHG
Sbjct: 354 CTEHG 358
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CKEHG 6
C EHG
Sbjct: 341 CAEHG 345
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CAEHG 356
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CKEHG 6
C EHG
Sbjct: 341 CTEHG 345
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 HGFAGW 10
H FA W
Sbjct: 156 HAFAQW 161
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HGFAGW 10
H FA W
Sbjct: 156 HAFAQW 161
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CKEHG 6
C EHG
Sbjct: 341 CAEHG 345
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CKEHG 6
C EHG
Sbjct: 341 CAEHG 345
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CAEHG 356
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 CKEHG 6
C EHG
Sbjct: 341 CAEHG 345
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 CKEHG 6
C EHG
Sbjct: 352 CTEHG 356
34|Sequence|166|175|GFAGWFETSA
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 FAGWFE 7
FAGWFE
Sbjct: 836 FAGWFE 841
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 GFAGWFETSA 10
G GWFE A
Sbjct: 13 GCTGWFEVEA 22
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 GFAGWFETSA 10
G GWFE A
Sbjct: 13 GCTGWFEVEA 22
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 GFAGWFETSA 10
G GWFE A
Sbjct: 13 GCTGWFEVEA 22
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 GFAGWF 6
GFA WF
Sbjct: 740 GFAEWF 745
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GFAGWFETSA 10
GF G F+T A
Sbjct: 398 GFTGLFQTGA 407
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GFAGWFET 8
GFA W +T
Sbjct: 358 GFADWSQT 365
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GFAGWFET 8
GFA W +T
Sbjct: 358 GFADWSQT 365
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 3 AGWFE 7
+GWFE
Sbjct: 144 SGWFE 148
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 4 GWFETS 9
GW ETS
Sbjct: 347 GWTETS 352
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 4 GWFE 7
GWFE
Sbjct: 145 GWFE 148
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GFAGWF 6
GF WF
Sbjct: 1527 GFKNWF 1532
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 FAGWFE 7
F+GW E
Sbjct: 1474 FSGWVE 1479
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 FAGWFE 7
F+GW E
Sbjct: 1474 FSGWVE 1479
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 FAGWFE 7
F+GW E
Sbjct: 1474 FSGWVE 1479
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 FAGWFETSA 10
F+ W ET+A
Sbjct: 466 FSDWKETAA 474
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 WFETS 9
WF+TS
Sbjct: 47 WFQTS 51
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 5 WFETS 9
WF+TS
Sbjct: 47 WFQTS 51
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 5 WFETS 9
WF+TS
Sbjct: 47 WFQTS 51
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 GFAGWFE 7
G+AG FE
Sbjct: 98 GYAGGFE 104
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 FAGWFETSA 10
F G FE++A
Sbjct: 2876 FVGTFESAA 2884
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 FAGWFETSA 10
F G FE++A
Sbjct: 2876 FVGTFESAA 2884
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 WFETS 9
WF+TS
Sbjct: 47 WFQTS 51
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 5 WFETS 9
WF+TS
Sbjct: 47 WFQTS 51
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 GFAGW 5
GF GW
Sbjct: 322 GFPGW 326
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 GFAGW 5
GF GW
Sbjct: 322 GFPGW 326
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 FAGWFETSA 10
+ GW +TS+
Sbjct: 787 YLGWGDTSS 795
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 GFAGWFE 7
GFA W E
Sbjct: 3211 GFASWEE 3217
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 GFAGWF 6
G+AGW
Sbjct: 92 GWAGWL 97
35|Sequence|171|180|FETSAKDNIN
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 FETSAKDNIN 10
F+T AK NI+
Sbjct: 403 FQTGAKQNIH 412
>sp|VL2_HPV41|MINOR capsid protein L2|Human papillomavirus type 41
Query: 2 ETSAKDNI 9
ETS+ DNI
Sbjct: 212 ETSSTDNI 219
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 FETSAKDNIN 10
F+T+ +NIN
Sbjct: 410 FQTAVVNNIN 419
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 1 FETSAKDNIN 10
F T+ +NIN
Sbjct: 410 FRTAVVNNIN 419
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 SAKDNIN 10
S KDN N
Sbjct: 326 STKDNFN 332
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 SAKDNIN 10
S KDN N
Sbjct: 326 STKDNFN 332
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 SAKDNIN 10
S KDN N
Sbjct: 326 STKDNFN 332
36|Sequence|176|185|KDNINIEEAA
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 KDNINIEE 8
+ N+NIEE
Sbjct: 132 EQNLNIEE 139
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 KDNINIEE 8
+ N+NIEE
Sbjct: 132 EQNLNIEE 139
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 KDNINIEE 8
+ N+NIEE
Sbjct: 132 EQNLNIEE 139
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 1 KDNINIEEAA 10
K NIN+E +A
Sbjct: 94 KSNINLEISA 103
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 INIEEAA 10
+N+EEAA
Sbjct: 1457 LNLEEAA 1463
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 INIEEAA 10
+N+EEAA
Sbjct: 1457 LNLEEAA 1463
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 KDNINIE 7
KD IN+E
Sbjct: 1623 KDGINLE 1629
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 1 KDNINIE 7
KD IN+E
Sbjct: 87 KDGINLE 93
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 3 NINIEE 8
NINI+E
Sbjct: 401 NINIDE 406
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DNINIEEAA 10
D+IN++ +A
Sbjct: 752 DSINVDRSA 760
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 2 DNINIEEAA 10
D+IN++ +A
Sbjct: 752 DSINVDRSA 760
37|Sequence|181|190|IEEAARFLVE
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 IEEAARFL 8
+EEAAR++
Sbjct: 1459 LEEAARYM 1466
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 IEEAARFL 8
+EEAAR++
Sbjct: 1459 LEEAARYM 1466
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 IEEAARFL 8
IEE RFL
Sbjct: 623 IEETPRFL 630
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 IEEAARFL 8
IEE RFL
Sbjct: 626 IEETPRFL 633
38|Sequence|186|195|RFLVEKILVN
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 1 RFLVEKIL 8
R+L+EK+L
Sbjct: 101 RYLLEKML 108
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 3 LVEKILVN 10
++EKIL+N
Sbjct: 1030 ILEKILIN 1037
39|Sequence|191|200|KILVNHQSFP
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 1 KILVNHQS 8
+ L+NHQS
Sbjct: 298 QTLINHQS 305
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 VNHQSFP 10
V+H++FP
Sbjct: 2056 VSHRTFP 2062
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 KILVNHQS 8
+ ++NHQS
Sbjct: 302 QTMINHQS 309
>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5
Query: 4 VNHQSFP 10
+NH +FP
Sbjct: 85 MNHPTFP 91
>sp|E3RDB_ADE02|EARLY 3 receptor internalization and|Human adenovirus C serotype 2
Query: 4 VNHQSFP 10
+NH +FP
Sbjct: 87 MNHPTFP 93
>sp|E3B14_ADE06|EARLY E3B 14.5 kDa protein|Human adenovirus C serotype 6
Query: 4 VNHQSFP 10
+NH +FP
Sbjct: 87 MNHPTFP 93
40|Sequence|196|205|HQSFPNEEND
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 1 HQSFPNEEN 9
H+S PN+ N
Sbjct: 86 HKSRPNDRN 94
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 1 HQSFPNEEN 9
H+S PN+ N
Sbjct: 85 HKSRPNDRN 93
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 HQSFPNEEN 9
H+S PN+ N
Sbjct: 86 HKSRPNDRN 94
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 2 QSFPNEEND 10
+ FPN ND
Sbjct: 106 KCFPNGSND 114
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 HQSFPNEEND 10
H S P E+ D
Sbjct: 2374 HDSGPEEKRD 2383
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 HQSFPNEEND 10
H S P E+D
Sbjct: 1972 HYSGPTSEDD 1981
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FPNEEND 10
FP END
Sbjct: 405 FPINEND 411
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 4 FPNEEND 10
FP END
Sbjct: 405 FPINEND 411
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 4 FPNEEND 10
FP END
Sbjct: 405 FPINEND 411
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 FPNEEND 10
PN++ND
Sbjct: 635 LPNQDND 641
>sp|EBNA2_EBVG|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HQSFPNEEN 9
HQS PN+ +
Sbjct: 230 HQSTPNDPD 238
>sp|EBNA2_EBVB9|EPSTEIN-BARR nuclear antigen 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HQSFPNEEN 9
HQS PN+ +
Sbjct: 264 HQSTPNDPD 272
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 FPNEEND 10
PN++ND
Sbjct: 635 LPNQDND 641
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 HQSFPN 6
HQS PN
Sbjct: 431 HQSRPN 436
41|Sequence|201|210|NEENDVDKIK
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 1 NEENDVDKIK 10
NE+ D+DK +
Sbjct: 226 NEKPDIDKTE 235
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 4 NDVDKI 9
NDVDK+
Sbjct: 46 NDVDKL 51
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 DVDKIK 10
DVDK+K
Sbjct: 4484 DVDKVK 4489
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 EENDVD 7
EENDV+
Sbjct: 222 EENDVE 227
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EENDVD 7
EENDV+
Sbjct: 222 EENDVE 227
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EENDVD 7
EENDV+
Sbjct: 222 EENDVE 227
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 EENDVD 7
EEN+VD
Sbjct: 858 EENEVD 863
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 4 NDVDKI 9
NDVDK+
Sbjct: 46 NDVDKL 51
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ENDVDK 8
END DK
Sbjct: 2532 ENDADK 2537
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 ENDVDK 8
END DK
Sbjct: 2532 ENDADK 2537
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 3 ENDVDKI 9
END+D+I
Sbjct: 30 ENDIDEI 36
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ENDVDKI 9
END+D+I
Sbjct: 30 ENDIDEI 36
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 3 ENDVDKI 9
END+D+I
Sbjct: 30 ENDIDEI 36
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ENDVDKI 9
END+D+I
Sbjct: 30 ENDIDEI 36
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 3 ENDVDKI 9
END+D+I
Sbjct: 30 ENDIDEI 36
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 3 ENDVDKI 9
END+D+I
Sbjct: 30 ENDIDEI 36
>sp|TRX2_EBVB9|TRIPLEX capsid protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EENDVD 7
E NDVD
Sbjct: 126 ESNDVD 131
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 EENDVD 7
EEN++D
Sbjct: 843 EENEID 848
42|Sequence|206|215|VDKIKLDQET
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 VDKIKLDQ 8
VD+I+LD+
Sbjct: 160 VDQIQLDK 167
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 5 KLDQET 10
KLD+ET
Sbjct: 361 KLDEET 366
43|Sequence|211|225|LDQETLRAENKSQCC
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 TLRAENKSQC 14
T+R EN ++C
Sbjct: 959 TIREENTTEC 968
>sp|MB43_VZVO|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LDQETLRAENKSQC 14
LD+E +RA++ C
Sbjct: 17 LDRELIRAQSIQGC 30
>sp|MB43_VZVD|MEMBRANE protein UL43 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 LDQETLRAENKSQC 14
LD+E +RA++ C
Sbjct: 17 LDRELIRAQSIQGC 30
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DQETLRAENKSQC 14
D ETL + KS+C
Sbjct: 56 DMETLSSPVKSEC 68
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 2 DQETLRAEN 10
DQ T+R +N
Sbjct: 288 DQNTVRGDN 296
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 6 LRAENKSQC 14
++ NKSQC
Sbjct: 230 VKTGNKSQC 238
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 8 AENKSQCC 15
++NK +CC
Sbjct: 998 SDNKLKCC 1005
44|Sequence|216|225|LRAENKSQCC
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 AENKSQCC 10
++NK +CC
Sbjct: 998 SDNKLKCC 1005
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 LRAENKSQC 9
++ NKSQC
Sbjct: 230 VKTGNKSQC 238
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 5 NKSQCC 10
NKS CC
Sbjct: 229 NKSTCC 234