PTRD1_HUMAN Blast OutputR
Viruses
1|SequenceR|10|1|RFAPGVGRHM

>sp|PIF1_NPVAC|PER os infectivity factor 1|Autographa californica nuclear polyhedrosis

Query: 2 FAPGVGR 8
F PGVGR
Sbjct: 423 FFPGVGR 429


>sp|MB43_EHV1V|MEMBRANE protein UL43 homolog|Equine herpesvirus 1 (strain V592)

Query: 2 FAPGVGRH 9
F+P VG H
Sbjct: 263 FSPAVGTH 270


>sp|MB43_EHV1B|MEMBRANE protein UL43 homolog|Equine herpesvirus 1 (strain Ab4p)

Query: 2 FAPGVGRH 9
F+P VG H
Sbjct: 263 FSPAVGTH 270


>sp|NCAP_IBVG|NUCLEOPROTEIN infectious bronchitis virus (strain

Query: 1 RFAPGVGR 8
RF PG GR
Sbjct: 76 RFKPGKGR 83


>sp|GD_SUHVR|ENVELOPE glycoprotein D|Suid herpesvirus 1 (strain Rice)

Query: 3 APGVGRH 9
APGV RH
Sbjct: 346 APGVSRH 352




2|SequenceR|15|6|MKRVVRFAPG

>sp|DPOL1_BPKIM|DEPOLYMERASE 1, capsule K47-specific|Klebsiella phage vB_KpnP_IME205

Query: 2 KRVVRFAPG 10
+R+VR APG
Sbjct: 130 RRIVRLAPG 138


>sp|DPOL1_BPK52|DEPOLYMERASE 1, capsule K30/K69-specific|Klebsiella phage K5-2 (Bacteriophage

Query: 2 KRVVRFAPG 10
+R+VR APG
Sbjct: 130 RRIVRLAPG 138


>sp|DPOL1_BPK31|DEPOLYMERASE 1, capsule KN3-specific|Klebsiella phage KN3-1 (Bacteriophage

Query: 2 KRVVRFAPG 10
+R+VR APG
Sbjct: 130 RRIVRLAPG 138


>sp|DEPOL_BPK56|DEPOLYMERASE, capsule KL47-specific|Klebsiella phage P560 (Bacteriophage P560)

Query: 2 KRVVRFAPG 10
+R+VR APG
Sbjct: 130 RRIVRLAPG 138


>sp|DEPOL_BPK15|DEPOLYMERASE, capsule K47-specific|Klebsiella phage SH-KP152226 (Bacteriophage

Query: 2 KRVVRFAPG 10
+R+VR APG
Sbjct: 130 RRIVRLAPG 138


>sp|DPOL1_BPK54|DEPOLYMERASE 1, capsule K8-specific|Klebsiella phage K5-4 (Bacteriophage K5-4)

Query: 2 KRVVRFAPG 10
+++VR APG
Sbjct: 130 RKIVRLAPG 138


>sp|DPOL1_BPK32|DEPOLYMERASE 1, capsule K3-specific|Klebsiella phage KP32 (Bacteriophage KP32)

Query: 2 KRVVRFAPG 10
+++VR APG
Sbjct: 130 RKIVRLAPG 138


>sp|PRIM_ALHV1|DNA primase|Alcelaphine herpesvirus 1 (strain C500)

Query: 1 MKRVVRFAPG 10
M+ V RF PG
Sbjct: 572 MRVVTRFPPG 581


>sp|R1A_BCHK4|REPLICASE polyprotein 1a|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 MKRVVRFAPG 10
M+R ++F PG
Sbjct: 76 MQRAMKFLPG 85


>sp|R1A_BC133|REPLICASE polyprotein 1a|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 MKRVVRFAPG 10
M+R ++F PG
Sbjct: 76 MQRAMKFLPG 85


>sp|R1AB_BCHK4|REPLICASE polyprotein 1ab|Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004)

Query: 1 MKRVVRFAPG 10
M+R ++F PG
Sbjct: 76 MQRAMKFLPG 85


>sp|R1AB_BC133|REPLICASE polyprotein 1ab|Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Query: 1 MKRVVRFAPG 10
M+R ++F PG
Sbjct: 76 MQRAMKFLPG 85


>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus

Query: 1 MKRVVRFAPG 10
+KR +F PG
Sbjct: 2165 LKRTTKFFPG 2174


>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2

Query: 1 MKRVVRFAPG 10
+RVVR PG
Sbjct: 678 WRRVVRVCPG 687


>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1

Query: 1 MKRVVRFAPG 10
+RVVR PG
Sbjct: 676 WRRVVRVCPG 685




3|SequenceR|20|11|AGSAAMKRVV

>sp|VREN_LAMBD|PROTEIN ren|Escherichia phage lambda (Bacteriophage lambda)

Query: 3 SAAMKRVV 10
SAAMKRV+
Sbjct: 82 SAAMKRVL 89




4|SequenceR|25|16|LVQPEAGSAA

>sp|CAPSD_BPT5|MAJOR capsid protein|Escherichia phage T5 (Enterobacteria phage

Query: 1 LVQPEAGSAA 10
LV+P+AG A
Sbjct: 209 LVEPDAGKAT 218


>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 LVQPEAGSA 9
L +PEAGSA
Sbjct: 424 LPKPEAGSA 432


>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)

Query: 1 LVQPEAGSA 9
L +PEAGSA
Sbjct: 424 LPKPEAGSA 432


>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)

Query: 1 LVQPEAGSA 9
L +PEAGSA
Sbjct: 424 LPKPEAGSA 432


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 3 QPEAGSAA 10
+PEAG+AA
Sbjct: 117 KPEAGTAA 124


>sp|CAP8_ADES1|PRE-HEXON-LINKING protein VIII|Snake adenovirus serotype 1 (SnAdV-1)

Query: 3 QPEAGSAA 10
QPE G+AA
Sbjct: 13 QPETGTAA 20


>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 4 PEAGSAA 10
PEAG+AA
Sbjct: 118 PEAGAAA 124


>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1

Query: 3 QPEAGSAA 10
+PEAG+AA
Sbjct: 117 KPEAGTAA 124


>sp|DEPOL_BPK41|DEPOLYMERASE, capsule KN4-specific|Klebsiella phage KN4-1 (Bacteriophage KN4-1)

Query: 2 VQPEAGSAA 10
+ PE+GSAA
Sbjct: 189 ILPESGSAA 197




5|SequenceR|30|21|VLYQVLVQPE

>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)

Query: 1 VLYQVLVQPE 10
+LY+V+ QPE
Sbjct: 1450 LLYKVMNQPE 1459


>sp|ENV_FIVT2|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (isolate TM2)

Query: 1 VLYQVLVQPE 10
+ YQV+ QPE
Sbjct: 584 IKYQVVKQPE 593


>sp|ENV_FIVSD|ENVELOPE glycoprotein gp150|Feline immunodeficiency virus (strain San

Query: 3 YQVLVQPE 10
YQV+ QPE
Sbjct: 585 YQVVKQPE 592


>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 2 LYQVLVQPE 10
+YQ+LVQ E
Sbjct: 1890 IYQILVQRE 1898


>sp|317L_IIV6|UNCHARACTERIZED protein 317L|Invertebrate iridescent virus 6 (IIV-6)

Query: 2 LYQVLVQPE 10
+YQ+L QP+
Sbjct: 213 IYQILPQPQ 221


>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)

Query: 3 YQVLVQPE 10
+Q+LV PE
Sbjct: 275 FQILVNPE 282




6|SequenceR|35|26|LDKRLVLYQV

>sp|UBC3_MIMIV|PROBABLE ubiquitin-conjugating enzyme E2 R521|Acanthamoeba polyphaga

Query: 1 LDKRLVLYQ 9
LDK VLYQ
Sbjct: 857 LDKDSVLYQ 865




7|SequenceR|40|31|FPAQSLDKRL

***** No hits found ******


8|SequenceR|45|36|GAPWSFPAQS

>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)

Query: 1 GAPWSFPAQS 10
G+ WSFP+++
Sbjct: 1676 GSAWSFPSEA 1685


>sp|RDRP_BTV10|RNA-DIRECTED RNA polymerase|Bluetongue virus 10 (isolate USA)

Query: 1 GAPWSFPAQS 10
GAP+ FP Q+
Sbjct: 1088 GAPYMFPDQN 1097


>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)

Query: 1 GAPWSFPAQS 10
G+ WSFP+++
Sbjct: 345 GSAWSFPSEA 354


>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 1 GAPWS 5
GAPWS
Sbjct: 1061 GAPWS 1065


>sp|V13_SPTNK|PUTATIVE helicase V13|Sputnik virophage

Query: 3 PWSFP 7
PW FP
Sbjct: 453 PWKFP 457


>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain

Query: 4 WSFPAQS 10
WS+PA++
Sbjct: 317 WSYPAKN 323


>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)

Query: 4 WSFPAQS 10
WS+PA++
Sbjct: 317 WSYPAKN 323


>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain

Query: 4 WSFPAQS 10
WS+PA++
Sbjct: 317 WSYPAKN 323


>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)

Query: 4 WSFPAQS 10
WSFP+++
Sbjct: 1679 WSFPSET 1685


>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain

Query: 1 GAPWSFPAQS 10
G+ WS P+ S
Sbjct: 1735 GSQWSIPSAS 1744


>sp|CAPSD_CAVCA|CAPSID protein|Chicken anemia virus (isolate Australia/CAU269-7/2000)

Query: 1 GAPWSFP 7
GA WSFP
Sbjct: 320 GAQWSFP 326


>sp|CAPSD_CAV82|CAPSID protein|Chicken anemia virus (isolate Japan

Query: 1 GAPWSFP 7
GA WSFP
Sbjct: 320 GAQWSFP 326


>sp|CAPSD_CAV26|CAPSID protein|Chicken anemia virus (isolate USA

Query: 1 GAPWSFP 7
GA WSFP
Sbjct: 320 GAQWSFP 326


>sp|CAPSD_CAVCI|CAPSID protein|Chicken anemia virus (isolate USA

Query: 1 GAPWSFP 7
GA WSFP
Sbjct: 320 GAQWSFP 326


>sp|CAPSD_CAVAU|CAPSID protein|Chicken anemia virus (isolate Australia)

Query: 1 GAPWSFP 7
GA WSFP
Sbjct: 320 GAQWSFP 326


>sp|CAPSD_CAVC1|CAPSID protein|Chicken anemia virus (isolate Germany

Query: 1 GAPWSFP 7
GA WSFP
Sbjct: 320 GAQWSFP 326


>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 GAPWSFP 7
+PWS+P
Sbjct: 2280 ASPWSWP 2286


>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D

Query: 1 GAPWSFP 7
+PWS+P
Sbjct: 2280 ASPWSWP 2286


>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French

Query: 1 GAPWSFP 7
+PWS+P
Sbjct: 2280 ASPWSWP 2286


>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)

Query: 1 GAPWSFP 7
+PWS+P
Sbjct: 2280 ASPWSWP 2286


>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)

Query: 1 GAPWSFP 7
+PWS+P
Sbjct: 2280 ASPWSWP 2286


>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory

Query: 1 GAPWSFP 7
+PWS+P
Sbjct: 2280 ASPWSWP 2286


>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)

Query: 3 PWSFPAQS 10
PW+ PA S
Sbjct: 517 PWTSPASS 524


>sp|RDRP_AHNNV|RNA-DIRECTED RNA polymerase|Atlantic halibut nervous necrosis virus

Query: 3 PWSFPA 8
PWS PA
Sbjct: 733 PWSSPA 738


>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)

Query: 4 WSFPAQS 10
WSF AQS
Sbjct: 451 WSFVAQS 457


>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 GAPWSF 6
GAPWS
Sbjct: 510 GAPWSL 515


>sp|RDRP_GGNNV|RNA-DIRECTED RNA polymerase|Greasy grouper nervous necrosis virus

Query: 3 PWSFPA 8
PWS PA
Sbjct: 733 PWSSPA 738


>sp|RDRP_SJNNV|RNA-DIRECTED RNA polymerase|Striped jack nervous necrosis virus

Query: 3 PWSFPA 8
PWS PA
Sbjct: 733 PWSSPA 738




9|SequenceR|50|41|QAVLAGAPWS

>sp|DNBI_SHV21|MAJOR DNA-binding protein|Saimiriine herpesvirus 2 (strain 11)

Query: 5 AGAPWS 10
+GAPWS
Sbjct: 1060 SGAPWS 1065


>sp|VP2_AHSV3|OUTER capsid protein VP2|African horse sickness virus 3

Query: 1 QAVLAGAPWS 10
QA+L G WS
Sbjct: 580 QAILDGKEWS 589


>sp|GLYCO_SYNV|SPIKE glycoprotein|Sonchus yellow net virus (SYNV)

Query: 3 VLAGAPWS 10
VLAG+ WS
Sbjct: 13 VLAGSSWS 20




10|SequenceR|55|46|AAHCAQAVLA

***** No hits found ******


11|SequenceR|60|51|HLAATAAHCA

>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern

Query: 1 HLAATAAHC 9
HLA AHC
Sbjct: 2952 HLAGRCAHC 2960


>sp|CAPSD_SSVN|CAPSID protein|Sugarcane streak virus (isolate South

Query: 1 HLAATAAHC 9
H ATAA C
Sbjct: 95 HFIATAAAC 103


>sp|CAPSD_PASVK|CAPSID protein|Panicum streak virus (isolate Kenya)

Query: 1 HLAATAAHC 9
H ATAA C
Sbjct: 95 HFVATAAAC 103


>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)

Query: 1 HLAATAAHC 9
HL AHC
Sbjct: 2954 HLVGRCAHC 2962


>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)

Query: 1 HLAATAAHC 9
HL AHC
Sbjct: 2954 HLKGRCAHC 2962


>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)

Query: 1 HLAATAAHC 9
HL AHC
Sbjct: 2954 HLQGRCAHC 2962


>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype

Query: 1 HLAATAAHC 9
HL AHC
Sbjct: 2954 HLMGRCAHC 2962


>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)

Query: 1 HLAATAAHC 9
HL AHC
Sbjct: 2954 HLMGRCAHC 2962


>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)

Query: 1 HLAATAAHC 9
HL AHC
Sbjct: 2954 HLVGWCAHC 2962




12|SequenceR|65|56|HDRHTHLAAT

>sp|NCAP_SYNV|NUCLEOPROTEIN yellow net virus (SYNV)

Query: 2 DRHTHLAAT 10
D+HTH+ +
Sbjct: 71 DKHTHMTES 79




13|SequenceR|70|61|AATHPHDRHT

>sp|POL1_TOTV|RNA1 polyprotein|Tomato torrado virus (isolate Solanum

Query: 1 AATHPHDRH 9
AA PHD H
Sbjct: 646 AAYFPHDMH 654


>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)

Query: 5 PHDRHT 10
PH RHT
Sbjct: 1563 PHGRHT 1568


>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 ATHPHDR 8
AT PHDR
Sbjct: 291 ATDPHDR 297


>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 2 ATHPHDR 8
AT PHDR
Sbjct: 291 ATDPHDR 297


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 1 AATHPH 6
AA HPH
Sbjct: 2958 AAAHPH 2963


>sp|VP7_AQRVC|OUTER capsid protein VP7|Aquareovirus C (isolate Golden

Query: 3 THPHDR 8
THPHD+
Sbjct: 179 THPHDK 184




14|SequenceR|75|66|LEQLYAATHP

>sp|POLG_SPMMV|GENOME polyprotein|Sweet potato mild mottle virus

Query: 2 EQLYAATH 9
E LYAATH
Sbjct: 1395 EVLYAATH 1402


>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40

Query: 1 LEQLYAATHP 10
LEQ Y +HP
Sbjct: 252 LEQNYDVSHP 261


>sp|VF602_ASFB7|PROTEIN B602L|African swine fever virus (strain

Query: 1 LEQLYAATHP 10
L+QLY T+P
Sbjct: 26 LKQLYQRTNP 35


>sp|VF602_ASFM2|PROTEIN B602L|African swine fever virus (isolate

Query: 1 LEQLYAATHP 10
L+QLY T+P
Sbjct: 26 LKQLYQRTNP 35


>sp|VF602_ASFK5|PROTEIN B602L|African swine fever virus (isolate

Query: 1 LEQLYAATHP 10
L+QLY T+P
Sbjct: 26 LKQLYQKTNP 35


>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P

Query: 4 LYAATHP 10
LYAA HP
Sbjct: 63 LYAARHP 69


>sp|VF602_ASFWA|PROTEIN B602L|African swine fever virus (isolate

Query: 1 LEQLYAATHP 10
L+QLY T+P
Sbjct: 26 LKQLYQRTNP 35


>sp|VF602_ASFP4|PROTEIN B602L|African swine fever virus (isolate

Query: 1 LEQLYAATHP 10
L+QLY T+P
Sbjct: 26 LKQLYQRTNP 35


>sp|RPOA_EAVBU|REPLICASE polyprotein 1ab|Equine arteritis virus (strain Bucyrus)

Query: 2 EQLYAATHP 10
E+ +AA HP
Sbjct: 2954 EEKFAAAHP 2962


>sp|L_BDVV|RNA-DIRECTED RNA polymerase L|Borna disease virus (strain V)

Query: 1 LEQLYAATHP 10
+ LYAAT P
Sbjct: 1330 IRMLYAATGP 1339


>sp|L_BDV1|RNA-DIRECTED RNA polymerase L|Borna disease virus 1 (BoDV-1)

Query: 1 LEQLYAATHP 10
+ LYAAT P
Sbjct: 1330 IRMLYAATGP 1339


>sp|LTP_MHV68|LARGE tegument protein deneddylase|Murid herpesvirus 4 (MuHV-4) (Murine

Query: 5 YAATHP 10
YAA+HP
Sbjct: 1273 YAASHP 1278




15|SequenceR|80|71|KRMRGLEQLY

>sp|YR366_MIMIV|PUTATIVE ATP-dependent RNA helicase R366|Acanthamoeba polyphaga mimivirus

Query: 2 RMRGLEQLY 10
R+R LE LY
Sbjct: 110 RLRNLEDLY 118


>sp|POLG_TVMV|GENOME polyprotein|Tobacco vein mottling virus (TVMV)

Query: 2 RMRGLEQLY 10
RMR EQ+Y
Sbjct: 2928 RMRNSEQVY 2936




16|SequenceR|85|76|AELVVKRMRG

>sp|RING2_BPCA1|RING protein 2|Bacteroides phage crAss001 (Bacteroides phage

Query: 2 ELVVKRMRG 10
ELVVK +RG
Sbjct: 197 ELVVKELRG 205


>sp|CAPSD_BPZR|CAPSID protein|Enterobacteria phage ZR (Bacteriophage ZR)

Query: 2 ELVVKRMRG 10
EL+VK M+G
Sbjct: 103 ELIVKAMQG 111


>sp|CAPSD_BPR17|CAPSID protein|Enterobacteria phage R17 (Bacteriophage R17)

Query: 2 ELVVKRMRG 10
EL+VK M+G
Sbjct: 102 ELIVKAMQG 110


>sp|CAPSD_BPMS2|CAPSID protein|Escherichia phage MS2 (Bacteriophage MS2)

Query: 2 ELVVKRMRG 10
EL+VK M+G
Sbjct: 103 ELIVKAMQG 111


>sp|CAPSD_BPF2|CAPSID protein|Enterobacteria phage f2 (Bacteriophage f2)

Query: 2 ELVVKRMRG 10
EL+VK M+G
Sbjct: 102 ELIVKAMQG 110


>sp|POLG_RGMVD|GENOME polyprotein|Ryegrass mosaic virus (isolate Denmark/Danish)

Query: 4 VVKRMRG 10
VVK+MRG
Sbjct: 2541 VVKKMRG 2547


>sp|BXC_CBCP|BOTULINUM neurotoxin type C|Clostridium botulinum C phage (Clostridium

Query: 2 ELVVKRMRG 10
++++KR+RG
Sbjct: 1147 KIIIKRIRG 1155




17|SequenceR|90|81|TTEDPAELVV

>sp|VG23_BPMD2|MAJOR tail protein Gp23|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 1 TTEDPAELVV 10
TTEDP + VV
Sbjct: 84 TTEDPIDYVV 93


>sp|POLG_PEMVC|GENOME polyprotein|Pepper mottle virus (isolate California)

Query: 1 TTEDPAELV 9
TTED AE++
Sbjct: 2420 TTEDKAEIL 2428




18|SequenceR|95|86|ALEKLTTEDP

>sp|VG23_BPMD2|MAJOR tail protein Gp23|Mycobacterium phage D29 (Mycobacteriophage D29)

Query: 2 LEKLTTEDP 10
L ++TTEDP
Sbjct: 80 LREITTEDP 88


>sp|VG23_BPML5|MAJOR tail protein Gp23|Mycobacterium phage L5 (Mycobacteriophage L5)

Query: 2 LEKLTTEDP 10
L ++TTEDP
Sbjct: 80 LREITTEDP 88


>sp|059L_FRG3G|UNCHARACTERIZED protein 059L|Frog virus 3 (isolate Goorha)

Query: 1 ALEKLTTEDP 10
A+ +LT+ DP
Sbjct: 252 AMSRLTSSDP 261


>sp|CAPSD_BPP21|MAJOR capsid protein|Enterobacteria phage P21 (Bacteriophage 21)

Query: 1 ALEKLTTEDP 10
A+E+L EDP
Sbjct: 89 AVERLPGEDP 98




19|SequenceR|100|91|QQLTEALEKL

>sp|VG39_ICHVA|UNCHARACTERIZED protein ORF39|Ictalurid herpesvirus 1 (strain Auburn)

Query: 2 QLTEALEKL 10
+LTEALEK
Sbjct: 474 RLTEALEKF 482




20|SequenceR|105|96|HDINKQQLTE

>sp|Y111_NPVOP|UNCHARACTERIZED 8.2 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 HDINKQQLTE 10
HD NK+ L+E
Sbjct: 59 HDYNKENLSE 68


>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)

Query: 3 INKQQLTE 10
+NK QLTE
Sbjct: 227 VNKNQLTE 234


>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)

Query: 3 INKQQLTE 10
+NK QLTE
Sbjct: 227 VNKNQLTE 234


>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)

Query: 3 INKQQLTE 10
+NK QLTE
Sbjct: 227 VNKNQLTE 234


>sp|PG064_VACCW|PROTEIN OPG064|Vaccinia virus (strain Western Reserve)

Query: 3 INKQQLTE 10
+NK QLTE
Sbjct: 227 VNKNQLTE 234


>sp|ICP0_SUHVF|E3 ubiquitin-protein ligase ICP0|Suid herpesvirus 1 (strain

Query: 1 HDINKQQLTE 10
H +N+Q++TE
Sbjct: 190 HGMNRQRVTE 199


>sp|U2_BPMU|TAIL fiber assembly protein U'|Escherichia phage Mu (Bacteriophage Mu)

Query: 2 DINKQQLTE 10
D NKQ+LTE
Sbjct: 144 DENKQKLTE 152




21|SequenceR|110|101|ELWLMHDINK

>sp|GAG_SCVLA|MAJOR capsid protein|Saccharomyces cerevisiae virus L-A (ScV-L-A)

Query: 3 WLMHD 7
WLMHD
Sbjct: 313 WLMHD 317


>sp|RDRP_SCVLA|PROBABLE RNA-directed RNA polymerase|Saccharomyces cerevisiae virus L-A

Query: 3 WLMHD 7
WLMHD
Sbjct: 313 WLMHD 317


>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)

Query: 3 WLMHDIN 9
W+ HDIN
Sbjct: 5165 WVEHDIN 5171


>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 2 LWLMHDINK 10
+W +H INK
Sbjct: 173 MWEIHHINK 181


>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 860 EIWTVNDIQK 869


>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain

Query: 4 LMHDINK 10
L+HDINK
Sbjct: 1287 LIHDINK 1293


>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)

Query: 4 LMHDINK 10
L+HDINK
Sbjct: 1287 LIHDINK 1293


>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 862 EIWTVNDIQK 871


>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain

Query: 1 ELWLMHDIN 9
E W+ H IN
Sbjct: 447 ERWMNHSIN 455


>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)

Query: 4 LMHDINK 10
L+HDINK
Sbjct: 1287 LVHDINK 1293


>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 862 EIWTVNDIQK 871


>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 861 EVWTVNDIQK 870


>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 859 EVWTVNDIQK 868


>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 861 EVWTVNDIQK 870


>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 861 EVWTVNDIQK 870


>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 860 EVWTVNDIQK 869


>sp|POLG_BVY3|GENOME polyprotein|Blackberry virus Y (isolate Blackberry

Query: 3 WLMHDI 8
WL HD+
Sbjct: 700 WLAHDV 705


>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 861 EVWTVNDIQK 870


>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 847 EVWTVNDIQK 856


>sp|RDRP_BOTVF|RNA replication protein|Botrytis virus F (isolate Botrytis

Query: 3 WLMHDINK 10
W++HD K
Sbjct: 761 WVIHDTGK 768


>sp|POL_SIVCZ|GAG-POL polyprotein|Simian immunodeficiency virus (isolate CPZ

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 786 EVWTVNDIQK 795


>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 859 EVWTVNDIQK 868


>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1

Query: 1 ELWLMHDINK 10
E+W ++DI K
Sbjct: 838 EVWTVNDIQK 847


>sp|GB_RHCM6|ENVELOPE glycoprotein B|Rhesus cytomegalovirus (strain 68-1) (RhCMV)

Query: 2 LWLMHDINK 10
+W +H INK
Sbjct: 148 MWEVHYINK 156


>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1

Query: 3 WLMHDI 8
WL HD+
Sbjct: 299 WLQHDL 304


>sp|BXD_CBDP|BOTULINUM neurotoxin type D|Clostridium botulinum D phage (Clostridium

Query: 3 WLMHDINK 10
W++ D+N+
Sbjct: 973 WILQDVNR 980




22|SequenceR|115|106|INEPQELWLM

>sp|US02_EHV1B|GENE 68 protein|Equine herpesvirus 1 (strain Ab4p)

Query: 1 INEPQELWLM 10
IN+P LW++
Sbjct: 118 INQPYHLWVL 127


>sp|TF2B_MIMIV|PUTATIVE transcription initiation factor IIB-like|Acanthamoeba polyphaga

Query: 1 INEPQELW 8
IN+P+++W
Sbjct: 94 INKPEDIW 101


>sp|US02_EHV1K|US1 protein|Equine herpesvirus 1 (strain Kentucky

Query: 1 INEPQELWLM 10
IN+P LW++
Sbjct: 118 INQPYHLWVL 127


>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)

Query: 4 PQELWLM 10
PQ+LWL+
Sbjct: 253 PQKLWLL 259


>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)

Query: 4 PQELW 8
PQELW
Sbjct: 1434 PQELW 1438


>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)

Query: 4 PQELW 8
PQELW
Sbjct: 1365 PQELW 1369


>sp|IE2_HHV6G|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain GS)

Query: 4 PQELW 8
PQELW
Sbjct: 1379 PQELW 1383


>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)

Query: 4 PQELWLM 10
PQ+LWL+
Sbjct: 250 PQKLWLL 256


>sp|YR791_MIMIV|PUTATIVE ankyrin repeat protein R791|Acanthamoeba polyphaga mimivirus

Query: 1 INEPQELWL 9
+N P E+WL
Sbjct: 3 LNIPTEIWL 11


>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12

Query: 1 INEPQELWLM 10
I EPQ WL+
Sbjct: 211 IAEPQGRWLL 220


>sp|Y074_NPVOP|UNCHARACTERIZED 19.5 kDa protein|Orgyia pseudotsugata multicapsid polyhedrosis

Query: 1 INEPQELWL 9
++EP +LWL
Sbjct: 85 VDEPFKLWL 93


>sp|Y074_NPVAC|UNCHARACTERIZED 30.6 kDa protein in|Autographa californica nuclear polyhedrosis

Query: 1 INEPQELWL 9
++EP +LWL
Sbjct: 177 VDEPFKLWL 185


>sp|POLG_PEMVM|GENOME polyprotein|Peanut mottle virus (strain M)

Query: 2 NEPQELWLM 10
++ QELW M
Sbjct: 2690 DDRQELWFM 2698


>sp|POLN_ELV|NON-STRUCTURAL replication polyprotein|Erysimum latent virus (ELV)

Query: 4 PQELW 8
PQELW
Sbjct: 693 PQELW 697


>sp|RPC2_BP186|REGULATORY protein CII|Escherichia phage 186 (Bacteriophage 186)

Query: 4 PQELWLM 10
P ELWL+
Sbjct: 53 PPELWLL 59


>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48

Query: 1 INEPQELWLM 10
IN+ + WLM
Sbjct: 447 INKSSQFWLM 456


>sp|YR784_MIMIV|PUTATIVE ankyrin repeat protein R784|Acanthamoeba polyphaga mimivirus

Query: 4 PQELWLM 10
P E+WL+
Sbjct: 8 PDEIWLL 14




23|SequenceR|120|111|AICTAINEPQ

>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 AICTAINEPQ 10
AIC A N P+
Sbjct: 37 AICVATNVPE 46


>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 AICTAINEPQ 10
AIC A N P+
Sbjct: 37 AICVATNVPE 46


>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 AICTAINEPQ 10
AIC A N P+
Sbjct: 37 AICVATNVPE 46


>sp|VPP_BPHC1|PROBABLE terminase, ATPase subunit|Haemophilus phage HP1 (strain HP1c1)

Query: 1 AICTAINE 8
AIC AIN+
Sbjct: 581 AICNAINK 588


>sp|VG12_BPP22|REPLICATIVE DNA helicase|Salmonella phage P22 (Bacteriophage P22)

Query: 2 ICTAINEP 9
ICTA N P
Sbjct: 438 ICTASNAP 445


>sp|ENV_BLVJ|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Japanese

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390


>sp|ENV_BLVB5|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390


>sp|ENV_BLVAV|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390


>sp|ENV_BLV|ENVELOPE glycoprotein|Bovine leukemia virus (BLV)

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390


>sp|ENV_BLVAF|ENVELOPE glycoprotein|Bovine leukemia virus (isolate American

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390


>sp|ENV_BLVB2|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Belgium

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390


>sp|ENV_BLVAU|ENVELOPE glycoprotein|Bovine leukemia virus (isolate Australian)

Query: 1 AICTAINEP 9
++C INEP
Sbjct: 382 SLCPTINEP 390




24|SequenceR|125|116|PYPRLAICTA

>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)

Query: 1 PYPRLAICT 9
PY + A+CT
Sbjct: 251 PYSKSALCT 259


>sp|SEMA_ECTVM|SEMAPHORIN-LIKE protein 139|Ectromelia virus (strain Moscow) (ECTV)

Query: 1 PYPRLAICT 9
PY + A+CT
Sbjct: 248 PYSKSALCT 256


>sp|MVP_PSBMV|P3N-PIPO polyprotein|Pea seed-borne mosaic virus (strain

Query: 4 RLAICT 9
RLAICT
Sbjct: 1030 RLAICT 1035




25|SequenceR|130|121|GVEEKPYPRL

>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)

Query: 1 GVEEKPYPRL 10
GVE +P+P L
Sbjct: 6 GVENRPFPYL 15


>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)

Query: 1 GVEEKPYPRL 10
GVE +P+P L
Sbjct: 6 GVENRPFPYL 15


>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)

Query: 1 GVEEKPYPRL 10
GVE +P+P L
Sbjct: 6 GVENRPFPYL 15


>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)

Query: 1 GVEEKPYP 8
G+EEKP P
Sbjct: 1451 GLEEKPAP 1458


>sp|YR637_MIMIV|PUTATIVE F-box protein R637|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 EEKPYPRL 10
E K YPRL
Sbjct: 143 ESKKYPRL 150


>sp|RDRP_RCNMV|RNA-DIRECTED RNA polymerase|Red clover necrotic mosaic virus

Query: 2 VEEKPYPRL 10
VE+ PYP L
Sbjct: 245 VEDAPYPIL 253


>sp|POL_SIVVG|GAG-POL polyprotein|Simian immunodeficiency virus agm.vervet (isolate

Query: 1 GVEEKPYPR 9
GVE K YPR
Sbjct: 1428 GVELKEYPR 1436


>sp|CARG1_BPCA1|CARGO protein 1|Bacteroides phage crAss001 (Bacteroides phage

Query: 1 GVEEKPYPRL 10
G ++KPYP +
Sbjct: 273 GSKKKPYPSV 282


>sp|Y078_OSHVF|UNCHARACTERIZED protein ORF78|Ostreid herpesvirus 1 (isolate France)

Query: 1 GVEEKPYP 8
G+ E+PYP
Sbjct: 856 GIGERPYP 863


>sp|POLG_HAVSC|GENOME polyprotein|Simian hepatitis A virus genotype

Query: 2 VEEKPYPRL 10
+E+KPY L
Sbjct: 794 IEKKPYKEL 802


>sp|POL2_BRAV|RNA2 polyprotein|Blackcurrant reversion association virus (BRAV)

Query: 3 EEKPYPRL 10
EEKP P L
Sbjct: 760 EEKPVPSL 767




26|SequenceR|140|126|KFLRFKKLYQGVEEK

>sp|GLYCO_BEFVB|GLYCOPROTEIN ephemeral fever virus (strain

Query: 2 FLRFKKLYQGVEE 14
+L K LY+G+E+
Sbjct: 453 YLHTKSLYEGIED 465


>sp|GP38_BPLP0|GENE product 38|Lactococcus phage P008

Query: 3 LRFKKLYQGV 12
L+F K+Y+GV
Sbjct: 60 LKFGKIYEGV 69


>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)

Query: 5 FKKLYQGVE 13
F+KLYQ +E
Sbjct: 731 FEKLYQHLE 739


>sp|RIR1_BPT4|RIBONUCLEOSIDE-DIPHOSPHATE reductase subunit alpha|Enterobacteria phage T4 (Bacteriophage T4)

Query: 4 RFKKLYQGVEE 14
RF++LY+ E+
Sbjct: 372 RFRELYEAAEK 382


>sp|YL263_MIMIV|UNCHARACTERIZED protein L263|Acanthamoeba polyphaga mimivirus (APMV)

Query: 2 FLRFKKLYQGV 12
F RF Y+GV
Sbjct: 295 FTRFNNPYEGV 305


>sp|POLG_BVDVS|GENOME polyprotein|Bovine viral diarrhea virus (strain

Query: 5 FKKLYQGVEEK 15
FKKL++G +++
Sbjct: 772 FKKLFEGQKQE 782


>sp|YR566_MIMIV|UNCHARACTERIZED protein R566|Acanthamoeba polyphaga mimivirus (APMV)

Query: 3 LRFKKLYQGVEE 14
+++KKLY+ +E+
Sbjct: 102 VKYKKLYEDLEQ 113


>sp|5055R_ASFP4|PROTEIN MGF 505-5R|African swine fever virus (isolate

Query: 2 FLRFKKLYQ 10
FLR K LYQ
Sbjct: 273 FLRRKNLYQ 281


>sp|5055R_ASFWA|PROTEIN MGF 505-5R|African swine fever virus (isolate

Query: 2 FLRFKKLYQ 10
FLR K LYQ
Sbjct: 273 FLRRKNLYQ 281


>sp|5055R_ASFB7|PROTEIN MGF 505-5R|African swine fever virus (strain

Query: 2 FLRFKKLYQ 10
FLR K LYQ
Sbjct: 273 FLRRKNLYQ 281




27|SequenceR|140|131|KFLRFKKLYQ

>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3 LRFKKLY 9
LR+KKLY
Sbjct: 250 LRYKKLY 256


>sp|PHOSP_VSIVS|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3 LRFKKLY 9
LR+KKLY
Sbjct: 250 LRYKKLY 256


>sp|PHOSP_VSIVM|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3 LRFKKLY 9
LR+KKLY
Sbjct: 250 LRYKKLY 256


>sp|PHOSP_VSIVN|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3 LRFKKLY 9
LR+KKLY
Sbjct: 250 LRYKKLY 256


>sp|PHOSP_VSIVG|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3 LRFKKLY 9
LR+KKLY
Sbjct: 250 LRYKKLY 256


>sp|PHOSP_VSIVC|PHOSPHOPROTEIN stomatitis Indiana virus (strain

Query: 3 LRFKKLY 9
LR+KKLY
Sbjct: 250 LRYKKLY 256


>sp|5055R_ASFP4|PROTEIN MGF 505-5R|African swine fever virus (isolate

Query: 2 FLRFKKLYQ 10
FLR K LYQ
Sbjct: 273 FLRRKNLYQ 281


>sp|5055R_ASFWA|PROTEIN MGF 505-5R|African swine fever virus (isolate

Query: 2 FLRFKKLYQ 10
FLR K LYQ
Sbjct: 273 FLRRKNLYQ 281




THE END