PTRD1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|RFAPGVGRHM

>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 2 FAPGVGRH 9
F GVGRH
Sbjct: 12 FTSGVGRH 19


>sp|PDAD1_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 1|Archaeoglobus fulgidus (strain ATCC

Query: 2 FAPGVGRH 9
F GVGRH
Sbjct: 8 FTKGVGRH 15


>sp|PDAD2_ARCFU|PYRUVOYL-DEPENDENT arginine decarboxylase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 FAPGVGRH 9
F GVGRH
Sbjct: 10 FVSGVGRH 17


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 1 RFAPGVGRH 9
R APG G H
Sbjct: 263 RIAPGAGLH 271


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 2 FAPGVG 7
+APGVG
Sbjct: 222 YAPGVG 227


>sp|GLT_PYRHO|SODIUM-ASPARTATE symporter Glt(Ph)|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FAPGVGRHM 10
F PG G H+
Sbjct: 107 FNPGAGIHL 115


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RFAPGVGRHM 10
RF PG+ H+
Sbjct: 251 RFVPGIFLHI 260


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 1 RFAPGVGRH 9
R APG G H
Sbjct: 264 RIAPGRGLH 272


>sp|PIMT2_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 FAPGVGRH 9
F P +GRH
Sbjct: 226 FVPMLGRH 233


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 4 PGVGRHM 10
PG+G H+
Sbjct: 258 PGIGGHL 264




2|SequenceR|15|6|MKRVVRFAPG

>sp|HIS5_ARCFU|IMIDAZOLE glycerol phosphate synthase subunit|Archaeoglobus fulgidus (strain

Query: 3 RVVRFAP 9
RVVRF P
Sbjct: 99 RVVRFPP 105


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MKRVVRFAPG 10
M+ V+RF PG
Sbjct: 456 MRVVLRFLPG 465


>sp|KAE1B_METBF|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 MKRVVRFAPG 10
MKRV +PG
Sbjct: 335 MKRVPEISPG 344


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 3 RVVRFAPG 10
+V+RF PG
Sbjct: 5 KVLRFEPG 12


>sp|Y1861_SACS2|UPF0273 protein SSO1861|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MKRVVRFAPG 10
MKRV + PG
Sbjct: 1 MKRVKTYIPG 10


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 VVRFAPG 10
VVRFAP
Sbjct: 102 VVRFAPN 108


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 VVRFAPG 10
VVRFAP
Sbjct: 102 VVRFAPN 108


>sp|RL3_HALMA|LARGE ribosomal subunit protein uL3|Haloarcula marismortui (strain ATCC

Query: 2 KRVVRFAP 9
KR+VRF P
Sbjct: 307 KRLVRFRP 314


>sp|RL3_NATPD|LARGE ribosomal subunit protein uL3|Natronomonas pharaonis (strain ATCC

Query: 2 KRVVRFAP 9
KR+VRF P
Sbjct: 305 KRLVRFRP 312


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 VVRFAPG 10
VVRFAP
Sbjct: 102 VVRFAPN 108


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 VVRFAPG 10
VVRFAP
Sbjct: 102 VVRFAPN 108


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 VVRFAPG 10
VVRFAP
Sbjct: 102 VVRFAPN 108


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 4 VVRFAPG 10
+V+FAPG
Sbjct: 321 LVKFAPG 327




3|SequenceR|20|11|AGSAAMKRVV

>sp|NNRE_NITMS|NAD(P)H-HYDRATE epimerase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 AGSAAMKRVV 10
AG+AA+KR+V
Sbjct: 29 AGAAAVKRLV 38


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AGSAAMKRVV 10
GSAAM+ VV
Sbjct: 196 GGSAAMRSVV 205


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 1 AGSAAMKRVV 10
AGS+ M+RV+
Sbjct: 112 AGSSIMRRVM 121


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 AGSAAMKRV 9
AGS A KRV
Sbjct: 858 AGSKAAKRV 866




4|SequenceR|25|16|LVQPEAGSAA

>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 VQPEAGSAA 10
VQP +GS+A
Sbjct: 91 VQPHSGSSA 99


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 VQPEAGSAA 10
VQP +GS+A
Sbjct: 91 VQPHSGSSA 99


>sp|RS11_CENSY|SMALL ribosomal subunit protein uS11|Cenarchaeum symbiosum (strain A)

Query: 2 VQPEAGSA 9
QPEAG+A
Sbjct: 49 TQPEAGTA 56


>sp|GLYA_METBF|SERINE hydroxymethyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VQPEAGSAA 10
VQP +GS A
Sbjct: 89 VQPHSGSGA 97


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 VQPEAGSAA 10
VQP +GS A
Sbjct: 89 VQPHSGSQA 97


>sp|GLYA_METMA|SERINE hydroxymethyltransferase|Methanosarcina mazei (strain ATCC

Query: 2 VQPEAGSAA 10
VQP +GS A
Sbjct: 89 VQPHSGSGA 97


>sp|Y1021_METB6|UPF0145 protein Mboo_1021|Methanoregula boonei (strain DSM 21154

Query: 1 LVQPEAGSAA 10
+V+PE G+A+
Sbjct: 106 VVEPETGAAS 115


>sp|GLYA_METAC|SERINE hydroxymethyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 VQPEAGSAA 10
VQP +GS A
Sbjct: 89 VQPHSGSGA 97


>sp|GLYA_HALMA|SERINE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC

Query: 2 VQPEAGSAA 10
VQP +GS A
Sbjct: 91 VQPHSGSQA 99




5|SequenceR|30|21|VLYQVLVQPE

>sp|MFNA_METTH|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothermobacter

Query: 3 YQVLVQPE 10
YQ++V+PE
Sbjct: 292 YQLVVEPE 299


>sp|MFNA_METS3|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanobrevibacter smithii

Query: 3 YQVLVQPE 10
Y V+V+PE
Sbjct: 318 YDVVVEPE 325


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VLYQVLV 7
VLYQVL+
Sbjct: 22 VLYQVLI 28




6|SequenceR|35|26|LDKRLVLYQV

>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDKRLVLYQV 10
LDK L+LYQV
Sbjct: 106 LDKDLILYQV 115


>sp|PROA_METBU|GAMMA-GLUTAMYL phosphate reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 LDKRLVLYQV 10
LDK L LYQV
Sbjct: 106 LDKGLELYQV 115


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDKRLVLYQV 10
LD L+LYQV
Sbjct: 106 LDDDLILYQV 115


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDKRLVLYQV 10
LD L+LYQ+
Sbjct: 106 LDNDLILYQI 115


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain ATCC

Query: 3 KRLVLYQV 10
KRLVLY+V
Sbjct: 132 KRLVLYEV 139


>sp|RL13_PYRNV|LARGE ribosomal subunit protein uL13|Pyrobaculum neutrophilum (strain DSM

Query: 3 KRLVLYQV 10
KRLV+Y+V
Sbjct: 130 KRLVVYEV 137


>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 1 LDKRLVLYQV 10
+DK+LVL +V
Sbjct: 76 MDKKLVLLRV 85




7|SequenceR|40|31|FPAQSLDKRL

>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FPAQSLDKRL 10
PA+ +DKRL
Sbjct: 252 LPAEEVDKRL 261


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 2 PAQSLDKR 9
P QSLD+R
Sbjct: 176 PEQSLDER 183


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FPAQSLDKRL 10
P SLDK+L
Sbjct: 261 LPEDSLDKKL 270




8|SequenceR|45|36|GAPWSFPAQS

>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 3 PWSFPA 8
PW+FPA
Sbjct: 145 PWNFPA 150


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PWSFPA 8
PW+FPA
Sbjct: 147 PWNFPA 152


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTLPA 230


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTLPA 230


>sp|NADK_METMA|NAD kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PWSFPAQS 10
PW PA S
Sbjct: 223 PWVIPADS 230


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 PWSFP 7
PW+FP
Sbjct: 147 PWNFP 151


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 4 WSFPAQ 9
WS PAQ
Sbjct: 278 WSLPAQ 283


>sp|RS4E_CALMQ|SMALL ribosomal subunit protein eS4|Caldivirga maquilingensis (strain

Query: 1 GAPWS 5
GAPWS
Sbjct: 19 GAPWS 23


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 229 PWTLPA 234


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 229 PWTLPA 234


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 229 PWTLPA 234


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 1 GAPWSFPAQS 10
G P+S PAQ+
Sbjct: 139 GRPYSEPAQA 148


>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PWSFPAQS 10
PW+ PA +
Sbjct: 233 PWTLPANA 240


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 229 PWTLPA 234


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 GAPWSF 6
G PWS+
Sbjct: 715 GKPWSY 720


>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 GAPWS 5
GAPWS
Sbjct: 258 GAPWS 262


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 GAPWS 5
GAPWS
Sbjct: 258 GAPWS 262


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTLPA 230


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GAPWSFP 7
G WSFP
Sbjct: 205 GYVWSFP 211


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTLPA 230


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 220 PWTLPA 225


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 237 PWTLPA 242


>sp|DYR1_HALMA|DIHYDROFOLATE reductase 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 GAPWSFP 7
G PW +P
Sbjct: 26 GVPWHYP 32


>sp|SYI_HALWD|ISOLEUCINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 PWSFPAQS 10
PW+ PA +
Sbjct: 223 PWTIPANT 230


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 3 PWSFPAQ 9
PW FP +
Sbjct: 499 PWRFPRE 505


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PWSFPAQS 10
PW+ PA +
Sbjct: 226 PWTVPANT 233


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 224 PWTIPA 229


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 224 PWTLPA 229


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 224 PWTLPA 229


>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 PWSFP 7
PW+FP
Sbjct: 32 PWTFP 36


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTIPA 230


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTIPA 230


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTIPA 230


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 225 PWTIPA 230


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 224 PWTLPA 229


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 224 PWTLPA 229


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 3 PWSFP 7
PW FP
Sbjct: 309 PWPFP 313


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PWSFPA 8
PW+ PA
Sbjct: 226 PWTIPA 231




9|SequenceR|50|41|QAVLAGAPWS

>sp|G1PDH_HALWD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AVLAGAPW 9
AVLA APW
Sbjct: 152 AVLAEAPW 159


>sp|NADM_THEAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QAVLAGAPW 9
+ ++AG PW
Sbjct: 138 EKMIAGEPW 146


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 3 VLAGAPW 9
+LAG PW
Sbjct: 134 MLAGEPW 140


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VLAGAPW 9
++AG PW
Sbjct: 136 MIAGEPW 142


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 VLAGAPW 9
++AG PW
Sbjct: 136 MIAGEPW 142


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AVLAGAPWS 10
A+L +PWS
Sbjct: 248 AILCPSPWS 256


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 3 VLAGAPW 9
VLA APW
Sbjct: 157 VLAEAPW 163


>sp|RL30E_PYRNV|LARGE ribosomal subunit protein eL30|Pyrobaculum neutrophilum (strain

Query: 1 QAVLAGAP 8
+AVLAG P
Sbjct: 26 KAVLAGTP 33




10|SequenceR|55|46|AAHCAQAVLA

***** No hits found ******


11|SequenceR|60|51|HLAATAAHCA

>sp|TRPB_METJA|TRYPTOPHAN synthase beta chain|Methanocaldococcus jannaschii (strain ATCC

Query: 1 HLAATAAHCA 10
H ATAA CA
Sbjct: 126 HGVATAAACA 135


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HLAATAAH 8
HLA T AH
Sbjct: 71 HLAITKAH 78


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 5 TAAHC 9
TAAHC
Sbjct: 59 TAAHC 63


>sp|PDXT_METKA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanopyrus kandleri (strain

Query: 1 HLAATAAH 8
HL ATA H
Sbjct: 178 HLLATAFH 185




12|SequenceR|65|56|HDRHTHLAAT

>sp|HUTI_PICTO|IMIDAZOLONEPROPIONASE torridus (strain ATCC 700027

Query: 2 DRHTHLA 8
D HTHLA
Sbjct: 59 DSHTHLA 65


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DRHTHLAAT 10
+ HTHLA T
Sbjct: 55 NSHTHLAMT 63


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 HDRHTHL 7
+D HTHL
Sbjct: 118 NDEHTHL 124


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DRHTHLA 8
DRHTH+
Sbjct: 230 DRHTHIG 236


>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DRHTHLAAT 10
+ HTHL+ T
Sbjct: 62 NTHTHLSMT 70




13|SequenceR|70|61|AATHPHDRHT

>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 HPHDR 8
HPHDR
Sbjct: 155 HPHDR 159


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 1 AATHPHDRH 9
A THPH H
Sbjct: 61 AITHPHGDH 69


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain KIN4/I

Query: 2 ATHPHDRHT 10
A HP D+H+
Sbjct: 101 AEHPKDKHS 109


>sp|IMDH_THEAC|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 THPHD 7
+HPHD
Sbjct: 464 SHPHD 468


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 THPHD 7
+HPHD
Sbjct: 467 SHPHD 471


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 THPHD 7
+HPHD
Sbjct: 467 SHPHD 471


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 3 THPHD 7
+HPHD
Sbjct: 467 SHPHD 471


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 THPHD 7
+HPHD
Sbjct: 478 SHPHD 482


>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 5 PHDRHT 10
PH RHT
Sbjct: 190 PHSRHT 195


>sp|GUAA_AERPE|GMP synthase [glutamine-hydrolyzing]|Aeropyrum pernix (strain ATCC

Query: 4 HPHDRHT 10
HP RHT
Sbjct: 173 HPEVRHT 179


>sp|METAA_THEXX|HOMOSERINE O-acetyltransferase|Thermoplasmatales archaeon (strain BRNA1)

Query: 5 PHDRHT 10
PH RHT
Sbjct: 190 PHSRHT 195


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 ATHPHD 7
AT PHD
Sbjct: 200 ATRPHD 205


>sp|RS15_METTH|SMALL ribosomal subunit protein uS15|Methanothermobacter

Query: 4 HPHDRHT 10
HP D HT
Sbjct: 88 HPKDLHT 94


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AATHPHDRHT 10
AA HP D T
Sbjct: 4 AARHPDDMKT 13


>sp|RS15_THEKO|SMALL ribosomal subunit protein uS15|Thermococcus kodakarensis (strain

Query: 4 HPHDRHT 10
HP D+H+
Sbjct: 105 HPKDKHS 111


>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 5 PHDRH 9
PH+RH
Sbjct: 10 PHERH 14


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 2 ATHPHD 7
A HPHD
Sbjct: 246 ARHPHD 251




14|SequenceR|75|66|LEQLYAATHP

>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 EQLYAATHP 10
E+LY AT P
Sbjct: 119 EKLYHATSP 127


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LEQLYAATHP 10
LE+L A+T P
Sbjct: 516 LEELEASTEP 525


>sp|ARCH_METAC|PROTEIN archease|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EQLYAATHP 10
EQ Y +HP
Sbjct: 108 EQYYPESHP 116




15|SequenceR|80|71|KRMRGLEQLY

>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KRMRGLEQLY 10
KRMRG + L+
Sbjct: 70 KRMRGFDVLF 79


>sp|Y3524_METJA|UNCHARACTERIZED protein MJECL24|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRMRGLEQLY 10
KR+ L+QLY
Sbjct: 200 KRLEQLKQLY 209


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 2 RMRGLEQLY 10
R RG+E+LY
Sbjct: 17 RERGIEELY 25


>sp|AROA_AERPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RMRGLEQL 9
R+RGLE+L
Sbjct: 322 RLRGLERL 329


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KRMRGLEQLY 10
KRMRG L+
Sbjct: 71 KRMRGFNVLF 80


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC

Query: 4 RGLEQLY 10
RG+E+LY
Sbjct: 19 RGIEELY 25


>sp|Y1777_THEGJ|UPF0292 protein TGAM_1777|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRMRGLEQLY 10
K ++G+E+LY
Sbjct: 106 KDIKGVEELY 115


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 KRMRGLEQLY 10
K++ G+E++Y
Sbjct: 329 KKVDGIEEMY 338


>sp|Y474_PYRAB|UPF0292 protein PYRAB04740|Pyrococcus abyssi (strain GE5 /

Query: 1 KRMRGLEQLY 10
K ++G+E LY
Sbjct: 106 KDIKGIEDLY 115


>sp|Y1700_PYRHO|UPF0292 protein PH1700|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KRMRGLEQLY 10
K ++G+E LY
Sbjct: 106 KDIKGIEDLY 115


>sp|Y187_THEON|UPF0292 protein TON_0187|Thermococcus onnurineus (strain NA1)

Query: 1 KRMRGLEQLY 10
K ++G+E LY
Sbjct: 106 KDIKGIEDLY 115




16|SequenceR|85|76|AELVVKRMRG

>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AELVVKRMRG 10
AE+VVK ++G
Sbjct: 439 AEIVVKVIKG 448


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 ELVVKRMRG 10
+LVVK +RG
Sbjct: 142 DLVVKDLRG 150




17|SequenceR|90|81|TTEDPAELVV

>sp|NADK_METMJ|NAD kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 TEDPAELVV 10
TE PA LV+
Sbjct: 219 TEKPAHLVI 227


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 TTEDPAEL 8
TT+DP EL
Sbjct: 28 TTQDPEEL 35


>sp|THI4_PYRAR|THIAMINE thiazole synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TEDPAELV 9
T DPAEL+
Sbjct: 97 TVDPAELI 104


>sp|THI4_PYRCJ|THIAMINE thiazole synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 TEDPAELV 9
T DPAEL+
Sbjct: 97 TVDPAELI 104


>sp|THI4_PYRAE|THIAMINE thiazole synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TEDPAELV 9
T DPAEL+
Sbjct: 97 TVDPAELI 104


>sp|THI4_PYRNV|THIAMINE thiazole synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TEDPAELV 9
T DPAEL+
Sbjct: 97 TVDPAELI 104


>sp|THI4_PYRIL|THIAMINE thiazole synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TEDPAELV 9
T DPAEL+
Sbjct: 97 TVDPAELI 104


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TEDPAELV 9
TE+P ELV
Sbjct: 281 TENPEELV 288


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii

Query: 1 TTEDPAELV 9
TT+ P ELV
Sbjct: 20 TTDKPEELV 28


>sp|IF2P_HALSA|PROBABLE translation initiation factor IF-2|Halobacterium salinarum

Query: 1 TTEDPAEL 8
TT+DP +L
Sbjct: 6 TTDDPGDL 13


>sp|IF2P_HALS3|PROBABLE translation initiation factor IF-2|Halobacterium salinarum

Query: 1 TTEDPAEL 8
TT+DP +L
Sbjct: 6 TTDDPGDL 13




18|SequenceR|95|86|ALEKLTTEDP

>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALEKLTTEDP 10
AL KLT EDP
Sbjct: 414 ALRKLTIEDP 423


>sp|GGR_PYRFU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALEKLTTED 9
A+EKLT ED
Sbjct: 337 AMEKLTDED 345


>sp|GGR_PYRHO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALEKLTTED 9
A+EKLT ED
Sbjct: 337 AMEKLTDED 345


>sp|GGR_PYRAB|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 ALEKLTTED 9
A+EKLT ED
Sbjct: 337 AMEKLTDED 345


>sp|GPI_THEGJ|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ALEKLTTEDP 10
A EKL EDP
Sbjct: 40 AYEKLLREDP 49


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 1 ALEKLTTEDP 10
A+EK+ TE P
Sbjct: 44 AIEKVKTEKP 53


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 1 ALEKLTTEDP 10
ALE+ TE+P
Sbjct: 380 ALERELTEEP 389


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 3 EKLTTEDP 10
EKL EDP
Sbjct: 45 EKLQIEDP 52


>sp|HTR7_HALSA|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALEKLTTE 8
ALE LTTE
Sbjct: 330 ALEDLTTE 337


>sp|HTR7_HALS3|TRANSDUCER protein Htr7|Halobacterium salinarum (strain ATCC 29341

Query: 1 ALEKLTTE 8
ALE LTTE
Sbjct: 330 ALEDLTTE 337


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LEKLTTEDP 10
L KLT +DP
Sbjct: 416 LRKLTLQDP 424


>sp|Y1021_METJA|UNCHARACTERIZED protein MJ1021|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALEKLTTED 9
A+EK+ TED
Sbjct: 89 AVEKIDTED 97


>sp|IF2P_METBF|PROBABLE translation initiation factor IF-2|Methanosarcina barkeri (strain

Query: 1 ALEKLTTEDP 10
A+E T EDP
Sbjct: 393 AIEASTVEDP 402




19|SequenceR|100|91|QQLTEALEKL

>sp|RS3_THEVO|SMALL ribosomal subunit protein uS3|Thermoplasma volcanium (strain ATCC

Query: 1 QQLTEALEK 9
QQ+TE LEK
Sbjct: 62 QQMTETLEK 70


>sp|CHED_ARCFU|PROBABLE chemoreceptor glutamine deamidase CheD|Archaeoglobus fulgidus

Query: 1 QQLTEALEKL 10
+ +TEA+E+L
Sbjct: 67 EMMTEAMERL 76


>sp|RS3_THEAC|SMALL ribosomal subunit protein uS3|Thermoplasma acidophilum (strain

Query: 1 QQLTEALEK 9
QQ+T+ LEK
Sbjct: 62 QQMTDTLEK 70


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 1 QQLTEALEKL 10
+QL +ALE+L
Sbjct: 263 EQLKQALEEL 272


>sp|PFDA_METB6|PREFOLDIN subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 1 QQLTEALEKL 10
++++EALEKL
Sbjct: 108 KKVSEALEKL 117


>sp|DNLI_METTH|DNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 QQLTEALEKL 10
QQL+E +EKL
Sbjct: 480 QQLSERMEKL 489




20|SequenceR|105|96|HDINKQQLTE

>sp|SECY_ARCFU|PROTEIN translocase subunit SecY|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DINKQQLTE 10
D+ K+QLTE
Sbjct: 472 DLAKEQLTE 480


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 HDINKQQLTE 10
H++ +QLTE
Sbjct: 543 HNLRPEQLTE 552


>sp|G1PDH_THEAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HDINKQQLTE 10
HD N QQ+ E
Sbjct: 284 HDENWQQIKE 293


>sp|TFE_IGNH4|TRANSCRIPTION factor E|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DINKQQLTE 10
DI+++QLTE
Sbjct: 34 DISEEQLTE 42




21|SequenceR|110|101|ELWLMHDINK

>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 1 ELWLMHDIN 9
+ WL HDI+
Sbjct: 95 DFWLNHDIS 103


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 WLMHDINK 10
WL+H +NK
Sbjct: 728 WLLHRLNK 735


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 3 WLMHDINK 10
+L HDIN+
Sbjct: 478 YLWHDINR 485


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 3 WLMHDINK 10
+L HDIN+
Sbjct: 478 YLWHDINR 485


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 3 WLMHDINK 10
+L HDIN+
Sbjct: 478 YLWHDINR 485


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELWLMHD 7
+LW+M+D
Sbjct: 62 DLWMMND 68


>sp|PYRC_SACS2|DIHYDROOROTASE solfataricus (strain ATCC 35092

Query: 2 LWLMHDINK 10
LWL+ IN+
Sbjct: 244 LWLLQAINE 252


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WLMHDIN 9
WL+ D+N
Sbjct: 12 WLVRDVN 18


>sp|PIWI_ARCFU|PIWI protein|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELWLMHDIN 9
E+W +H+IN
Sbjct: 74 EVWHIHNIN 82


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WLMHDINK 10
W++H +NK
Sbjct: 728 WMLHRLNK 735


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 WLMHDINK 10
W++H +NK
Sbjct: 728 WMLHRLNK 735


>sp|PELO_METS5|PROTEIN pelota homolog|Metallosphaera sedula (strain ATCC 51363

Query: 1 ELWLMH 6
+LWL+H
Sbjct: 22 DLWLIH 27


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WLMHDINK 10
W++H +NK
Sbjct: 728 WMLHRLNK 735


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WLMHDINK 10
W++H +NK
Sbjct: 728 WMLHRLNK 735




22|SequenceR|115|106|INEPQELWLM

>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 1 INEPQEL 7
INEP+EL
Sbjct: 24 INEPEEL 30


>sp|TATC_CENSY|SEC-INDEPENDENT protein translocase protein TatC|Cenarchaeum symbiosum (strain A)

Query: 3 EPQELW 8
EP ELW
Sbjct: 37 EPAELW 42


>sp|RRP41_SULTO|EXOSOME complex component Rrp41|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 INEPQELW 8
+NEP+++W
Sbjct: 174 LNEPEDMW 181


>sp|RNP3_AERPE|RIBONUCLEASE P protein component 3|Aeropyrum pernix (strain ATCC 700893

Query: 3 EPQELW 8
EP ELW
Sbjct: 169 EPHELW 174


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 NEPQELW 8
++P+ELW
Sbjct: 395 SDPEELW 401


>sp|R15PI_PYRHO|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus horikoshii (strain ATCC

Query: 3 EPQELW 8
EP+ELW
Sbjct: 46 EPEELW 51


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 INEPQELWLM 10
+N P ++W M
Sbjct: 561 VNNPIDIWPM 570


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INEPQELW 8
I+EPQE++
Sbjct: 638 ISEPQEVY 645


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 5 QELWLM 10
QELWL+
Sbjct: 189 QELWLV 194


>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 NEPQELW 8
N P E+W
Sbjct: 62 NNPDEVW 68


>sp|CORA_METJA|COBALT/MAGNESIUM transport protein CorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 NEPQELWLM 10
N PQ WL+
Sbjct: 288 NNPQGFWLV 296


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 2 NEPQELWL 9
N+P E WL
Sbjct: 443 NDPIERWL 450


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 INEPQEL 7
+NEP+EL
Sbjct: 498 VNEPEEL 504


>sp|Y164_METJA|UNCHARACTERIZED protein MJ0164|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INEPQELWL 9
I EP E W+
Sbjct: 285 IKEPDENWI 293


>sp|RL15E_NANEQ|LARGE ribosomal subunit protein eL15|Nanoarchaeum equitans (strain

Query: 2 NEPQELWLM 10
N P+ +WL+
Sbjct: 140 NRPEYVWLL 148


>sp|RRP4_THEVO|EXOSOME complex component Rrp4|Thermoplasma volcanium (strain ATCC 51530

Query: 1 INEPQELWL 9
+NE +E WL
Sbjct: 122 VNEIKESWL 130


>sp|RFCL_STAMF|REPLICATION factor C large subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 NEPQELW 8
++P+E+W
Sbjct: 277 DDPEEIW 283




23|SequenceR|120|111|AICTAINEPQ

>sp|Y1365_METJA|UNCHARACTERIZED protein MJ1365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ICTAINEPQ 10
IC A+N P+
Sbjct: 272 ICYALNNPE 280


>sp|SYDND_HALWD|ASPARTATE--TRNA(ASP/ASN) ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 CTAINEPQ 10
CT IN P+
Sbjct: 153 CTEINTPK 160


>sp|SYDND_HALMA|ASPARTATE--TRNA(ASP/ASN) ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 CTAINEPQ 10
CT IN P+
Sbjct: 153 CTEINTPK 160


>sp|HPRL2_HALTV|HGPRTASE-LIKE protein 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 AICTAINE 8
AICTA+++
Sbjct: 131 AICTALDD 138


>sp|PRIL_HALSA|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 2 ICTAINEP 9
+C AIN P
Sbjct: 324 LCDAINHP 331


>sp|PRIL_HALS3|DNA primase large subunit PriL|Halobacterium salinarum (strain ATCC

Query: 2 ICTAINEP 9
+C AIN P
Sbjct: 324 LCDAINHP 331


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AICTAINEP 9
AICT EP
Sbjct: 176 AICTQCGEP 184


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AICTAINEP 9
A+C A+N P
Sbjct: 498 AVCKALNIP 506




24|SequenceR|125|116|PYPRLAICTA

>sp|PORA_METBF|PYRUVATE synthase subunit PorA|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYPRLAICTA 10
P+P+ IC A
Sbjct: 307 PFPKEQICKA 316


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PYPRLAIC 8
PY R+ IC
Sbjct: 45 PYRRVKIC 52


>sp|Y649_ARCFU|UPF0280 protein AF_0649|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PYPRLAICTA 10
P LAICT+
Sbjct: 131 PVDYLAICTS 140


>sp|AROA_METMP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain DSM

Query: 4 RLAICTA 10
RLA CTA
Sbjct: 342 RLAACTA 348


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YPRLAICTA 10
YP++ IC A
Sbjct: 48 YPKVRICPA 56




25|SequenceR|130|121|GVEEKPYPRL

>sp|SRP19_AERPE|SIGNAL recognition particle 19 kDa|Aeropyrum pernix (strain ATCC 700893

Query: 2 VEEKPYPRL 10
VEE YPRL
Sbjct: 64 VEESSYPRL 72


>sp|SRP19_DESA1|SIGNAL recognition particle 19 kDa|Desulfurococcus amylolyticus (strain

Query: 3 EEKPYPRL 10
EEK YPRL
Sbjct: 57 EEKHYPRL 64


>sp|SYDND_META3|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VEEKPYPRL 10
V+E P+PR+
Sbjct: 280 VQETPFPRI 288


>sp|METK_AERPE|S-ADENOSYLMETHIONINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VEEKPYPRL 10
VE PYPR+
Sbjct: 7 VESYPYPRV 15


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 3 EEKPYPRL 10
E+K YPRL
Sbjct: 32 EDKKYPRL 39


>sp|SYD_THEAC|ASPARTATE--TRNA(ASP) ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VEEKPYPRL 10
V E P+PR+
Sbjct: 270 VPETPFPRI 278


>sp|SYDND_NATPD|ASPARTATE--TRNA(ASP/ASN) ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VEEKPYPRL 10
V E P+PRL
Sbjct: 273 VPETPFPRL 281


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 GVEEKPYPR 9
GV+ KP PR
Sbjct: 108 GVKAKPLPR 116


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GVEEKPYPRL 10
G+++ PY RL
Sbjct: 215 GIDQDPYWRL 224


>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVEEKPYPRL 10
GVE K YP L
Sbjct: 315 GVEAKFYPVL 324


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GVEEKPYPRL 10
G+++ PY RL
Sbjct: 215 GIDQDPYWRL 224


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 GVEEKPY 7
GV+EKP+
Sbjct: 42 GVDEKPF 48


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GVEEKPYPRL 10
G+E K YP L
Sbjct: 232 GIELKYYPTL 241


>sp|PHOU1_METTH|PHOSPHATE-SPECIFIC transport system accessory protein|Methanothermobacter

Query: 4 EKPYPRL 10
EK YPR+
Sbjct: 2 EKKYPRI 8


>sp|SRP19_HYPBU|SIGNAL recognition particle 19 kDa|Hyperthermus butylicus (strain DSM

Query: 2 VEEKPYPR 9
VEE YPR
Sbjct: 56 VEEAAYPR 63


>sp|Y599_METJA|UNCHARACTERIZED protein MJ0599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EEKPYP 8
E KPYP
Sbjct: 8 ENKPYP 13


>sp|SYW_SACS2|TRYPTOPHAN--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GVEEKPYPRL 10
G+++ PY RL
Sbjct: 214 GIDQDPYWRL 223


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 GVEEKPY 7
GV+EKP+
Sbjct: 12 GVDEKPH 18


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GVEEKPYP 8
G E PYP
Sbjct: 36 GSNENPYP 43


>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VEEKPYPRL 10
V KP+PR+
Sbjct: 270 VPSKPFPRI 278


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 1 GVEEKP 6
GVEEKP
Sbjct: 40 GVEEKP 45


>sp|GCSPB_HALSA|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Halobacterium

Query: 1 GVEEKPYP 8
GV+ PYP
Sbjct: 67 GVDSGPYP 74


>sp|DPHB_NATPD|DIPHTHINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GVEEKPYPRL 10
GVE++P P L
Sbjct: 61 GVEQEPGPIL 70




26|SequenceR|140|126|KFLRFKKLYQGVEEK

>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 5 FKKLYQGVE 13
FKKLYQ +E
Sbjct: 127 FKKLYQELE 135


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 5 FKKLYQGVE 13
FKKLYQ +E
Sbjct: 130 FKKLYQELE 138


>sp|TRMI_PYRAB|TRNA (adenine(57)-N(1)/adenine(58)-N(1))-methyltransferase

Query: 3 LRFKKLYQGVEEK 15
++ K +Y+G+EE+
Sbjct: 149 IKLKDIYEGIEEE 161


>sp|RL4_THEVO|LARGE ribosomal subunit protein uL4|Thermoplasma volcanium (strain ATCC

Query: 6 KKLYQGVEEK 15
KKLY G+ EK
Sbjct: 100 KKLYVGINEK 109


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KFLRFKKLYQGVEE 14
+FLR +K+Y +E+
Sbjct: 167 EFLRIEKIYAWIED 180


>sp|PDXS_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina mazei (strain

Query: 2 FLRFKKLYQGVE 13
F+ F+KL G E
Sbjct: 3 FMEFEKLRHGTE 14


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 LRFKKLYQGVEEK 15
+R K+LY+G E+
Sbjct: 774 IRGKRLYRGYRER 786


>sp|RIFK_THEPD|RIBOFLAVIN kinase|Thermofilum pendens (strain DSM 2475

Query: 4 RFKKLYQGVEEK 15
RFKKL + EE+
Sbjct: 41 RFKKLVEAAEEE 52


>sp|PDXS_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosarcina acetivorans

Query: 2 FLRFKKLYQGVE 13
F+ F+KL G E
Sbjct: 3 FMDFEKLRHGTE 14


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 2 FLRFKKLYQGVEE 14
+ RF+ LYQ +++
Sbjct: 94 YTRFRTLYQILDD 106


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 2 FLRFKKLYQGVE 13
FL++++ + GVE
Sbjct: 195 FLQYREEFHGVE 206


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LRFKKLYQGVE 13
++ KLY+GVE
Sbjct: 212 VKIAKLYKGVE 222


>sp|RUBY_METJA|PUTATIVE rubrerythrin|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 RFKKLYQGVEE 14
RFKKL + VEE
Sbjct: 147 RFKKLLKEVEE 157


>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KFLRFKKLY 9
+++RF+KLY
Sbjct: 131 QWIRFRKLY 139


>sp|AROE_METTH|SHIKIMATE dehydrogenase (NADP(+))|Methanothermobacter thermautotrophicus

Query: 8 LYQGVE 13
LYQGVE
Sbjct: 252 LYQGVE 257


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 8 LYQGVE 13
LYQGVE
Sbjct: 237 LYQGVE 242


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 6 KKLYQGVEEK 15
K Y GVEE+
Sbjct: 194 KLFYTGVEER 203


>sp|FLAK_METVO|PREFLAGELLIN peptidase|Methanococcus voltae

Query: 2 FLRFKKLYQGVEEK 15
+L FK L GV+ K
Sbjct: 131 YLFFKNLSNGVKPK 144


>sp|DNLI_NANEQ|DNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KFLRFKKLYQGVEEK 15
KFL F+K+ Q V+ K
Sbjct: 308 KFLPFQKISQRVKRK 322


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 5 FKKLYQGVE 13
FK+ YQG +
Sbjct: 57 FKRFYQGTK 65


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KFLRFKKLYQGVE 13
+++R+K LY G E
Sbjct: 51 EYVRWKALYYGEE 63


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 KFLRFKKLYQGVE 13
+++R+K LY G E
Sbjct: 51 EYVRWKALYYGEE 63


>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KFLRFKKLYQGVE 13
++LR K Y G+E
Sbjct: 355 RYLRPGKFYDGLE 367


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KFLRFKKLYQGVE 13
+++R+K LY G E
Sbjct: 56 EYVRWKALYYGEE 68


>sp|SYK_AERPE|LYSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KFLRFKKLYQGVEE 14
++ R +++Y G+EE
Sbjct: 337 QYYRAERIYFGIEE 350


>sp|PRIS_PYRCJ|DNA primase small subunit PriS|Pyrobaculum calidifontis (strain DSM

Query: 3 LRFKKLYQGV 12
LRF+K +QG
Sbjct: 269 LRFEKPFQGT 278


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC

Query: 2 FLRFKKLYQGVE 13
++R+K LY G E
Sbjct: 55 YVRWKALYYGEE 66


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 5 FKKLYQGVEEK 15
F K Y+G EK
Sbjct: 698 FNKFYEGGGEK 708


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FLRFKKLYQGVEEK 15
F++FK LY+ +K
Sbjct: 170 FIQFKDLYRWARQK 183


>sp|CCA_NANEQ|CCA-ADDING enzyme|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 FLRFKKLYQG 11
F+RF K Y+G
Sbjct: 59 FVRFPKKYKG 68


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLRFKKLY 9
F +FKK+Y
Sbjct: 66 FYKFKKIY 73


>sp|LYSJ_PYRHO|PUTATIVE [LysW]-aminoadipate semialdehyde/glutamate semialdehyde

Query: 1 KFLRFKKLYQG 11
KF+ F+ LY G
Sbjct: 77 KFVNFEYLYMG 87


>sp|PAT_SACS2|N-ACETYLTRANSFERASE Pat|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FLRFKKLYQGVEE 14
+LRF LY+ EE
Sbjct: 31 YLRFFHLYRITEE 43


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 7 KLYQGVEEK 15
KLY VEEK
Sbjct: 451 KLYVPVEEK 459




27|SequenceR|140|131|KFLRFKKLYQ

>sp|KCY_IGNH4|CYTIDYLATE kinase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KFLRFKKLY 9
+++RF+KLY
Sbjct: 131 QWIRFRKLY 139


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 5 FKKLYQ 10
FKKLYQ
Sbjct: 127 FKKLYQ 132


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 5 FKKLYQ 10
FKKLYQ
Sbjct: 130 FKKLYQ 135


>sp|CDC69_HALSA|ORC1-TYPE DNA replication protein 9|Halobacterium salinarum (strain ATCC

Query: 2 FLRFKKLYQ 10
+ RF+ LYQ
Sbjct: 94 YTRFRTLYQ 102


>sp|RNJL_METJA|RNASE J-like protein|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FLRFKKLY 9
F +FKK+Y
Sbjct: 66 FYKFKKIY 73


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 FLRFKKLYQ 10
F++FK LY+
Sbjct: 170 FIQFKDLYR 178




THE END