PTPA_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|PPPQREGEAM

>sp|Y1560_METJA|UNCHARACTERIZED MFS-type transporter MJ1560|Methanocaldococcus jannaschii (strain

Query: 2 PPQREGEAM 10
P R+GEAM
Sbjct: 327 PTHRKGEAM 335


>sp|RNP1_THESM|RIBONUCLEASE P protein component 1|Thermococcus sibiricus (strain DSM 12597

Query: 3 PQREGEAM 10
PQR+GEA+
Sbjct: 16 PQRKGEAL 23


>sp|KAE1_AERPE|TRNA N6-adenosine threonylcarbamoyltransferase|Aeropyrum pernix

Query: 2 PPQREGEAM 10
PP+R+GE +
Sbjct: 2 PPKRDGEVL 10


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 PPPQREG 7
PPP REG
Sbjct: 525 PPPDREG 531


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 PPPQREGEAM 10
PP REGE +
Sbjct: 283 PPGVREGENL 292


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 PPPQREGE 8
P P+R GE
Sbjct: 213 PDPERRGE 220




2|SequenceR|15|6|EESSDPPPQR

>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 ESSDPPPQ 9
+ SDPPP+
Sbjct: 290 DGSDPPPE 297


>sp|THIE_THEAC|THIAMINE-PHOSPHATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 SDPPPQR 10
SDP P+R
Sbjct: 190 SDPDPER 196


>sp|DTDA_STAMF|D-AMINOACYL-TRNA deacylase|Staphylothermus marinus (strain ATCC 43588

Query: 4 SDPPPQR 10
SDP PQR
Sbjct: 240 SDPVPQR 246


>sp|RL18_METMA|LARGE ribosomal subunit protein uL18|Methanosarcina mazei (strain ATCC

Query: 1 EESSDPPPQ 9
EESSD P Q
Sbjct: 153 EESSDLPEQ 161


>sp|RL18_METBF|LARGE ribosomal subunit protein uL18|Methanosarcina barkeri (strain

Query: 1 EESSDPPPQ 9
EESSD P Q
Sbjct: 153 EESSDLPEQ 161


>sp|RL18_METAC|LARGE ribosomal subunit protein uL18|Methanosarcina acetivorans (strain

Query: 1 EESSDPPPQ 9
EESSD P Q
Sbjct: 153 EESSDLPEQ 161




3|SequenceR|20|11|TAPPAEESSD

>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TAPPAEESSD 10
T PPAEE+ D
Sbjct: 300 TPPPAEENLD 309


>sp|NIKR_METBU|PUTATIVE nickel-responsive regulator|Methanococcoides burtonii (strain DSM

Query: 1 TAPPAEE 7
TAPPAE+
Sbjct: 133 TAPPAEK 139


>sp|Y384_ARCFU|UPF0252 protein AF_0384|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 APPAEESS 9
+PPAEE S
Sbjct: 17 SPPAEELS 24


>sp|Y1625_ARCFU|UNCHARACTERIZED protein AF_1625|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TAPPAEESSD 10
T PPAE D
Sbjct: 409 TKPPAESPRD 418




4|SequenceR|25|16|IIFNQTAPPA

>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 IIFNQTAPPA 10
IIF++ PPA
Sbjct: 80 IIFSRITPPA 89


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IIFNQTAPPA 10
I +NQ PPA
Sbjct: 135 IHYNQIQPPA 144


>sp|ILVC_METTP|KETOL-ACID reductoisomerase (NADP(+))|Methanothrix thermoacetophila (strain

Query: 1 IIFNQTAPP 9
I FNQ PP
Sbjct: 112 IHFNQIIPP 120


>sp|METE_METTH|METHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 IIFNQTAPPA 10
II+++ PPA
Sbjct: 80 IIYSRITPPA 89


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 3 FNQTAPP 9
F+QT PP
Sbjct: 151 FHQTMPP 157


>sp|PURT_SULAC|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Sulfolobus

Query: 1 IIFNQTAP 8
++FN+ AP
Sbjct: 281 VLFNEVAP 288




5|SequenceR|30|21|IEKKPIIFNQ

>sp|GCSH2_SACS2|PROBABLE glycine cleavage system H|Saccharolobus solfataricus (strain ATCC

Query: 2 EKKPIIFNQ 10
EK PII NQ
Sbjct: 94 EKSPIIINQ 102


>sp|GCSH2_SULTO|PROBABLE glycine cleavage system H|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IEKKPIIFNQ 10
+EK P++ NQ
Sbjct: 93 VEKNPVLVNQ 102


>sp|GCSH2_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 1 IEKKPIIFNQ 10
+EK P+I N+
Sbjct: 93 VEKSPVILNR 102




6|SequenceR|35|26|DPVTHIEKKP

>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 DPVTHIEK 8
DP+T IEK
Sbjct: 135 DPITAIEK 142


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 1 DPVTHIEKK 9
DP HI KK
Sbjct: 120 DPFFHINKK 128


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DPVTH 5
DPVTH
Sbjct: 1073 DPVTH 1077


>sp|Y875_METJA|UNCHARACTERIZED protein MJ0875|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VTHIEKKP 10
VTH +KKP
Sbjct: 678 VTHDKKKP 685


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus (strain

Query: 1 DPVTHIEKK 9
DP HI+K+
Sbjct: 117 DPFFHIDKR 125


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 1 DPVTHIEKK 9
DP HI+K+
Sbjct: 117 DPFFHIDKR 125


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 1 DPVTHIEKK 9
DP HI+K+
Sbjct: 117 DPYFHIDKR 125


>sp|METK_THEVO|S-ADENOSYLMETHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DPVTHIEK 8
+PVTH+ K
Sbjct: 306 NPVTHVGK 313


>sp|PDXS_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 1 DPVTHIEKK 9
D V HI+K+
Sbjct: 111 DEVNHIDKR 119


>sp|PDXS_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 1 DPVTHIEKK 9
D V HI+K+
Sbjct: 111 DEVNHIDKR 119


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 DPVTHIEK 8
+P+THI K
Sbjct: 313 NPITHIGK 320


>sp|METK_PICTO|S-ADENOSYLMETHIONINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DPVTHIEK 8
+PVTH+ K
Sbjct: 308 NPVTHVGK 315


>sp|PDXS_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 1 DPVTHIEKK 9
D V HI+K+
Sbjct: 111 DEVNHIDKR 119


>sp|PDXS_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanococcus maripaludis

Query: 1 DPVTHIEKK 9
D V HI+K+
Sbjct: 111 DEVNHIDKR 119


>sp|METK_THEAC|S-ADENOSYLMETHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DPVTHIEK 8
+PVTH+ K
Sbjct: 306 NPVTHVGK 313




7|SequenceR|40|31|KWKGMDPVTH

>sp|CARB2_METKA|CARBAMOYL phosphate synthase large chain,|Methanopyrus kandleri (strain AV19

Query: 1 KWKGMDPV 8
KW G+DPV
Sbjct: 350 KWPGVDPV 357


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 2 WKGMDPV 8
W+G+DPV
Sbjct: 345 WEGLDPV 351


>sp|HTPX_PICTO|PROTEASE HtpX homolog|Picrophilus torridus (strain ATCC 700027

Query: 1 KWKGMDP 7
KWK M P
Sbjct: 276 KWKNMKP 282


>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KWKGMDP 7
K KGMDP
Sbjct: 35 KVKGMDP 41


>sp|DLDH3_HALMA|DIHYDROLIPOYL dehydrogenase 3|Haloarcula marismortui (strain ATCC 43049

Query: 3 KGMDPVT 9
KGM PVT
Sbjct: 379 KGMTPVT 385


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KWKGMDPV 8
KW G +PV
Sbjct: 186 KWLGAEPV 193


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 WKGMDPV 8
W+G+DP+
Sbjct: 345 WEGLDPL 351


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 KWKGMDPV 8
KW G +PV
Sbjct: 193 KWLGAEPV 200


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 KWKGMDPV 8
KW G +PV
Sbjct: 193 KWLGAEPV 200


>sp|SAHH_AERPE|ADENOSYLHOMOCYSTEINASE pernix (strain ATCC 700893

Query: 2 WKGMDP 7
W+GM P
Sbjct: 100 WRGMTP 105


>sp|DPHB_AERPE|DIPHTHINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WKGMDPVT 9
W+G+ P++
Sbjct: 147 WRGVTPIS 154


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 6 DPVTH 10
DPVTH
Sbjct: 1073 DPVTH 1077


>sp|NUCS_METKA|ENDONUCLEASE NucS|Methanopyrus kandleri (strain AV19 /

Query: 1 KWKGMDPV 8
+WK ++PV
Sbjct: 231 EWKKLEPV 238


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 WKGMDPVT 9
W G+ PVT
Sbjct: 265 WGGVSPVT 272


>sp|HDRE_METMA|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina mazei (strain

Query: 4 GMDPVT 9
G+DPVT
Sbjct: 212 GLDPVT 217


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 WKGMDPVT 9
W G+ P+T
Sbjct: 297 WGGVSPIT 304


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KWKGMDPV 8
KW GMD +
Sbjct: 72 KWLGMDKI 79


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 2 WKGMDPVT 9
W+G D +T
Sbjct: 2 WRGRDVIT 9


>sp|PYRB_THEON|ASPARTATE carbamoyltransferase catalytic subunit|Thermococcus onnurineus

Query: 1 KWKGMDPVT 9
+WKG D ++
Sbjct: 2 EWKGRDVIS 10


>sp|PYRB_PYRHO|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus horikoshii

Query: 1 KWKGMDPVT 9
+WKG D ++
Sbjct: 2 EWKGRDVIS 10


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KWKGMD 6
+W+GMD
Sbjct: 117 EWEGMD 122


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 KWKGMDPV 8
KW+ +DP+
Sbjct: 49 KWEKVDPL 56




8|SequenceR|45|36|YAQSRKWKGM

>sp|METAA_METAX|HOMOSERINE O-acetyltransferase|Methanomethylophilus alvi (strain Mx1201)

Query: 3 QSRKWKGM 10
+SRKW GM
Sbjct: 96 KSRKWDGM 103


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 1 YAQSRKWKG 9
YAQ +W G
Sbjct: 840 YAQFAEWNG 848




9|SequenceR|50|41|GIYDAYAQSR

>sp|Y1689_METTH|UPF0111 protein MTH_1689|Methanothermobacter thermautotrophicus (strain

Query: 1 GIYDAYAQSR 10
G+Y AY Q R
Sbjct: 169 GLYSAYRQDR 178


>sp|DHAS_METTH|ASPARTATE-SEMIALDEHYDE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IYDAYAQSR 10
IYDAY R
Sbjct: 159 IYDAYTIKR 167


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 2 IYDAYAQSR 10
+Y AYA+ R
Sbjct: 377 LYSAYAEGR 385


>sp|PURE_METTH|PROBABLE N5-carboxyaminoimidazole ribonucleotide mutase|Methanothermobacter

Query: 1 GIYDAYAQSR 10
GIYD +SR
Sbjct: 314 GIYDEKIESR 323


>sp|AATB_NITMS|A-TYPE ATP synthase subunit B|Nitrosopumilus maritimus (strain SCM1)

Query: 2 IYDAYAQSR 10
+YDAY++++
Sbjct: 376 VYDAYSRAQ 384


>sp|LEU3_SULTO|3-ISOPROPYLMALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IYDAYAQSR 10
IYD YA R
Sbjct: 88 IYDMYANIR 96




10|SequenceR|55|46|LTLIFGIYDA

>sp|PDXT_THEAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermoplasma acidophilum

Query: 1 LTLIFGIYDA 10
LTL +G+YDA
Sbjct: 59 LTLEYGLYDA 68


>sp|Y1804_AERPE|UNCHARACTERIZED protein APE_1804|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTLIFGIYDA 10
+TL+ GIY++
Sbjct: 120 ITLVRGIYES 129


>sp|Y1276_AERPE|UNCHARACTERIZED protein APE_1276|Aeropyrum pernix (strain ATCC 700893

Query: 1 LTLIFGIYDA 10
+TL+ GIY++
Sbjct: 73 ITLVRGIYES 82


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LTLIFGIYD 9
+TL+FG+++
Sbjct: 144 VTLLFGLFN 152


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LTLIFGIYD 9
+TL+FG+++
Sbjct: 144 VTLLFGLFN 152


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TLIFGIY 8
TLIFGI+
Sbjct: 323 TLIFGIF 329


>sp|METE_METJA|METHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IFGIYD 9
+FG+YD
Sbjct: 25 VFGLYD 30


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTLIFGIYDA 10
LTL G++DA
Sbjct: 467 LTLFVGMFDA 476


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 2 TLIFGIYDA 10
T+++G+YD
Sbjct: 164 TVVYGMYDT 172


>sp|Y1483_METJA|UNCHARACTERIZED protein MJ1483|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTLIFGIY 8
L +IFGIY
Sbjct: 17 LIIIFGIY 24




11|SequenceR|60|51|KVGENLTLIF

>sp|GUAAB_METTH|GMP synthase [glutamine-hydrolyzing] subunit B|Methanothermobacter

Query: 2 VGENLTLIF 10
+G+NLT +F
Sbjct: 45 IGDNLTAVF 53


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGENLTLI 9
VGEN TL+
Sbjct: 196 VGENATLV 203


>sp|Y179_ARCFU|UNCHARACTERIZED protein AF_0179|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VGENLTLIF 10
+ EN+TL+F
Sbjct: 120 LSENVTLVF 128


>sp|COXX1_CENSY|PROTOHEME IX farnesyltransferase 1|Cenarchaeum symbiosum (strain A)

Query: 1 KVGENLTLIF 10
++GEN+ L +
Sbjct: 85 RIGENIVLAY 94


>sp|RS6E_METS5|SMALL ribosomal subunit protein eS6|Metallosphaera sedula (strain ATCC

Query: 1 KVGENLTL 8
K+G+N TL
Sbjct: 132 KIGDNFTL 139


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KVGENLTL 8
K G+NLTL
Sbjct: 467 KAGKNLTL 474


>sp|NADK_METLZ|NAD kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KVGENLTLI 9
++GEN TL+
Sbjct: 235 EIGENATLL 243


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 KVGENL 6
KVGENL
Sbjct: 94 KVGENL 99


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVGENLTL 8
K+GEN+ L
Sbjct: 898 KIGENIQL 905




12|SequenceR|65|56|TLKKGKVGEN

>sp|PUR5_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 LKKGKVGE 9
L+KGKVGE
Sbjct: 31 LRKGKVGE 38


>sp|DHYS_METTE|PROBABLE deoxyhypusine synthase|Methanosarcina thermophila

Query: 5 GKVGEN 10
GKVGEN
Sbjct: 284 GKVGEN 289


>sp|NRPR2_METMA|GLOBAL nitrogen regulator NrpRII|Methanosarcina mazei (strain ATCC

Query: 1 TLKKGKVG 8
T++KGKVG
Sbjct: 79 TIEKGKVG 86


>sp|TOP1_ARCFU|DNA topoisomerase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLKKGKVG 8
TLKKG+V
Sbjct: 28 TLKKGRVS 35




13|SequenceR|70|61|VRYEFTLKKG

>sp|DUT_METTH|PROBABLE deoxyuridine 5'-triphosphate

Query: 3 YEFTLKKG 10
YE+TLK+G
Sbjct: 120 YEYTLKRG 127


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 RYEFTLKKG 10
RY+ T+KKG
Sbjct: 400 RYQSTIKKG 408


>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 3 YEFTLKKG 10
Y F LKKG
Sbjct: 367 YNFYLKKG 374


>sp|TRUD1_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain DSM

Query: 1 VRYEFTLKKG 10
+ EF+LKKG
Sbjct: 366 IDLEFSLKKG 375


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 YEFTLKKG 10
YEF KKG
Sbjct: 154 YEFAKKKG 161


>sp|Y950_SULTO|UPF0200 protein STK_09500|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VRYEFTLKKG 10
+RYE LK+G
Sbjct: 113 LRYERLLKRG 122




14|SequenceR|75|66|NWMESVRYEF

>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NWMESVRYEF 10
NW+ SVR F
Sbjct: 231 NWVSSVRLNF 240


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 WMESVRYE 9
W+++ RYE
Sbjct: 326 WLDAERYE 333


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 2 WMESVRYE 9
W+++ RYE
Sbjct: 327 WLDAERYE 334


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 2 WMESVRYE 9
WM +RY+
Sbjct: 30 WMTKIRYK 37


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 WMESVR 7
W+ESVR
Sbjct: 125 WVESVR 130


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 WMESVRYEF 10
W+E Y+F
Sbjct: 150 WLEEYLYDF 158


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 WMESVRYEF 10
W+E Y+F
Sbjct: 150 WLEEYLYDF 158




15|SequenceR|80|71|EEHVENWMES

>sp|DMSD_HALSA|PUTATIVE dimethyl sulfoxide reductase chaperone|Halobacterium salinarum

Query: 2 EHVENWMES 10
EH NW+ES
Sbjct: 152 EHPRNWVES 160


>sp|DPHB_METBU|DIPHTHINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EEHVENWM 8
E+H E+W+
Sbjct: 63 EQHAEDWL 70


>sp|Y138_METJA|PUTATIVE glutamine amidotransferase-like protein MJ0138|Methanocaldococcus

Query: 2 EHVENWMES 10
E ++NWME+
Sbjct: 470 ERLDNWMEN 478


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 EEHVENW 7
EEH+E W
Sbjct: 224 EEHMERW 230


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 EEHVENW 7
E+H+E W
Sbjct: 214 EDHMEGW 220


>sp|MFNA_METJA|L-TYROSINE/L-ASPARTATE decarboxylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EHVENWME 9
EH++N++E
Sbjct: 381 EHIDNFIE 388


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 EHVENWMES 10
E+V NW+E+
Sbjct: 421 EYVHNWLET 429


>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EEHVENWMES 10
E H+EN ES
Sbjct: 6 EVHIENASES 15


>sp|Y3512_METJA|UNCHARACTERIZED protein MJECL12|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEHVENWMES 10
E V+NW +S
Sbjct: 97 EHDVKNWTKS 106


>sp|Y1566_ARCFU|UNCHARACTERIZED protein AF_1566|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EEHVENWMES 10
+E+V++W+++
Sbjct: 160 DEYVDDWLQT 169


>sp|Y1279_METJA|UNCHARACTERIZED protein MJ1279|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EHVENW 7
EH+E+W
Sbjct: 63 EHLESW 68


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HVENW 7
H+ENW
Sbjct: 1282 HIENW 1286


>sp|NTPTH_METKA|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Methanopyrus kandleri (strain AV19 /

Query: 2 EHVENWME 9
EHV W+E
Sbjct: 171 EHVLEWLE 178


>sp|MFNA_METMP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanococcus maripaludis

Query: 2 EHVENWMES 10
EH++ ++ES
Sbjct: 369 EHIDGFLES 377




16|SequenceR|85|76|AAQEKEEHVE

>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AQEKEEHVE 10
AQ+KEE+VE
Sbjct: 211 AQDKEEYVE 219




17|SequenceR|90|81|SVSQKAAQEK

***** No hits found ******


18|SequenceR|95|86|ICEDCSVSQK

>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ICEDCSV 7
+CE CSV
Sbjct: 309 VCEACSV 315


>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 2 CEDCSVS 8
C+DC VS
Sbjct: 447 CDDCYVS 453


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 ICEDC 5
+CEDC
Sbjct: 460 VCEDC 464


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 1 ICEDCSV 7
IC+ CSV
Sbjct: 204 ICDSCSV 210


>sp|TRM1_HALWD|TRNA (guanine(26)-N(2))-dimethyltransferase|Haloquadratum walsbyi

Query: 2 CEDCSVSQ 9
CEDC Q
Sbjct: 247 CEDCLTRQ 254


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 1 ICEDCSV 7
ICEDC +
Sbjct: 54 ICEDCGL 60


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 1 ICEDCSVSQK 10
IC+ CS+ K
Sbjct: 204 ICDSCSLGGK 213


>sp|KAD_HALSA|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 700922

Query: 1 ICEDCSVS 8
+CEDC +
Sbjct: 128 VCEDCGAT 135


>sp|KAD_HALS3|ADENYLATE kinase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ICEDCSVS 8
+CEDC +
Sbjct: 128 VCEDCGAT 135


>sp|Y439_PYRHO|PROTEIN PH0439|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ICEDC 5
+CEDC
Sbjct: 95 LCEDC 99


>sp|SYM_METVS|METHIONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CEDCSVS 8
CE CS+S
Sbjct: 126 CEKCSMS 132


>sp|HMDY_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 1 ICEDCSVS 8
IC C+VS
Sbjct: 123 ICNTCTVS 130


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 ICEDCSVSQK 10
IC C V +K
Sbjct: 1029 ICRKCDVCKK 1038


>sp|TF2B_ARCFU|TRANSCRIPTION initiation factor IIB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ICEDCSV 7
IC+DC +
Sbjct: 48 ICQDCGL 54


>sp|Y1012_METTP|UPF0200 protein Mthe_1012|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ICEDCSVSQ 9
IC DC++ +
Sbjct: 159 ICNDCTLDE 167


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 1 ICEDC 5
IC+DC
Sbjct: 116 ICDDC 120


>sp|PYLS_METTE|PYRROLYSINE--TRNA ligase|Methanosarcina thermophila

Query: 1 ICEDCSVSQK 10
IC+ C VS +
Sbjct: 68 ICKHCRVSDE 77


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC

Query: 1 ICEDC 5
+CEDC
Sbjct: 56 VCEDC 60


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 CEDCSVS 8
C DC +S
Sbjct: 666 CPDCGIS 672




19|SequenceR|100|91|ARPLPICEDC

>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 3 PLPICEDC 10
PLPICE C
Sbjct: 148 PLPICEGC 155


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ARPLPICEDC 10
A PLP C DC
Sbjct: 21 AGPLPTCSDC 30


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 2 RPLPICEDC 10
R P+CE C
Sbjct: 162 RDFPLCEKC 170


Query: 6 ICEDC 10
IC+DC
Sbjct: 116 ICDDC 120


>sp|AROC_PYRAE|CHORISMATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ARPLPICED 9
A+PLP+ +D
Sbjct: 177 AKPLPVVDD 185


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 2 RPLPICEDC 10
RP IC+ C
Sbjct: 449 RPYDICQAC 457


>sp|TF2B2_HALVD|TRANSCRIPTION initiation factor IIB 2|Haloferax volcanii (strain ATCC 29605

Query: 6 ICEDC 10
ICEDC
Sbjct: 54 ICEDC 58


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 5 PICEDC 10
P CE+C
Sbjct: 395 PFCEEC 400


>sp|YC9A_METJA|UNCHARACTERIZED protein MJ1292.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ARPLPICED 9
+RP+ CED
Sbjct: 14 SRPIIACED 22


>sp|HEM1_METS3|GLUTAMYL-TRNA reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ARPLPICED 9
A P ICED
Sbjct: 262 ANPRDICED 270


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 3 PLPICEDC 10
P P+C C
Sbjct: 626 PTPVCPRC 633


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 RPLPICEDC 10
RP P C C
Sbjct: 170 RPTPWCPRC 178


>sp|SYK_THEVO|LYSINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 PICEDC 10
P+CE C
Sbjct: 163 PLCEKC 168


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PICEDC 10
PIC DC
Sbjct: 22 PICVDC 27


>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 2 RPLPICEDC 10
R P+C+ C
Sbjct: 12 RRYPLCDSC 20


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 LPICEDC 10
+P+CE+C
Sbjct: 176 MPVCEEC 182


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 ARPLPICED 9
A+P+ +C+D
Sbjct: 55 AKPVFVCDD 63


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LPICEDC 10
+P+CE+C
Sbjct: 166 MPLCENC 172


>sp|AMTAB_METTH|PROBABLE threonylcarbamoyladenosine tRNA

Query: 4 LPICEDC 10
+PICE C
Sbjct: 144 IPICEGC 150


>sp|Y1272_IGNH4|UPF0179 protein Igni_1272|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 LPICEDC 10
LP+CE C
Sbjct: 23 LPLCEGC 29




20|SequenceR|105|96|PACHGARPLP

>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 PACHGARPLP 10
P CHG+R P
Sbjct: 149 PVCHGSRAEP 158


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 PACH---GARPLP 10
P C GARP+P
Sbjct: 42 PVCMAHPGARPMP 54


>sp|TOP6B_THESM|TYPE 2 DNA topoisomerase 6|Thermococcus sibiricus (strain DSM 12597

Query: 1 PACHGARPL 9
P HG RP+
Sbjct: 357 PPTHGLRPI 365


>sp|TOP6B_THEON|TYPE 2 DNA topoisomerase 6|Thermococcus onnurineus (strain NA1)

Query: 1 PACHGARPL 9
P HG RP+
Sbjct: 353 PPTHGLRPI 361


>sp|TOP6B_PYRHO|TYPE 2 DNA topoisomerase 6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PACHGARPL 9
P HG RP+
Sbjct: 354 PPTHGLRPI 362


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 1 PACHGARPL 9
P HG RP+
Sbjct: 354 PPTHGLRPI 362


>sp|PUR5_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CHGARPL 9
C GARPL
Sbjct: 85 CIGARPL 91


>sp|TOP6B_THEGJ|TYPE 2 DNA topoisomerase 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PACHGARPL 9
P HG RP+
Sbjct: 353 PPTHGLRPI 361


>sp|AGLE_HALVD|GLYCOSYLTRANSFERASE AglE|Haloferax volcanii (strain ATCC 29605

Query: 2 ACHGARPL 9
CH ARP
Sbjct: 206 GCHPARPF 213


>sp|TOP6B_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 1 PACHGARPL 9
P HG RP+
Sbjct: 354 PPTHGLRPI 362


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 PAC---HGARPLP 10
P C GA+PLP
Sbjct: 45 PVCLGLPGAKPLP 57


>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 3 CHGARPL 9
C GARP+
Sbjct: 103 CMGARPI 109


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 CHGARPL 9
C GARP+
Sbjct: 103 CMGARPI 109


>sp|SDX_THEAC|PROBABLE sulredoxin|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 ACHGAR 7
+CHGAR
Sbjct: 64 SCHGAR 69


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 3 CHGARPL 9
C GARP+
Sbjct: 103 CMGARPI 109


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 CHGARPL 9
C GARPL
Sbjct: 94 CLGARPL 100


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 3 CHGARPL 9
C GARP+
Sbjct: 103 CMGARPI 109


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 1 PACHGA 6
P CHG+
Sbjct: 162 PTCHGS 167


>sp|GUAAA_METTP|GMP synthase [glutamine-hydrolyzing] subunit A|Methanothrix

Query: 3 CHGARPL 9
CH +RPL
Sbjct: 147 CHESRPL 153


>sp|MTAD_HALSA|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Halobacterium salinarum (strain ATCC 700922

Query: 4 HGARPL 9
HG+RPL
Sbjct: 225 HGSRPL 230


>sp|PYLC_METAC|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 CHGARPLP 10
CH PLP
Sbjct: 195 CHMVTPLP 202


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 3 CHGARPL 9
C GARP+
Sbjct: 103 CMGARPI 109


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 PACHG---ARPLP 10
P C G A+PLP
Sbjct: 39 PVCTGMPGAKPLP 51


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PACHG 5
P CHG
Sbjct: 169 PTCHG 173


>sp|PYLC_METMA|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CHGARPLP 10
CH PLP
Sbjct: 203 CHMVTPLP 210


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 3 CHGARPL 9
C GARP+
Sbjct: 103 CMGARPI 109


>sp|PYLC_METBF|3-METHYL-D-ORNITHINE--L-LYSINE ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 CHGARPLP 10
CH PLP
Sbjct: 195 CHMVTPLP 202


>sp|Y1209_CALMQ|PROTEIN Cmaq_1209|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 GARPLP 10
GA+PLP
Sbjct: 123 GAKPLP 128


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 1 PACHGARP 8
P HG RP
Sbjct: 260 PKIHGVRP 267


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 ACHGAR 7
ACHGA+
Sbjct: 148 ACHGAK 153


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 1 PACHGARP 8
P HG RP
Sbjct: 261 PKIHGVRP 268


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 1 PACHGARP 8
P HG RP
Sbjct: 261 PKMHGVRP 268


>sp|RS10_THEVO|SMALL ribosomal subunit protein uS10|Thermoplasma volcanium (strain

Query: 4 HGARPLP 10
HG PLP
Sbjct: 37 HGPMPLP 43


>sp|RS10_THEAC|SMALL ribosomal subunit protein uS10|Thermoplasma acidophilum (strain

Query: 4 HGARPLP 10
HG PLP
Sbjct: 37 HGPMPLP 43




21|SequenceR|110|101|EIAESPACHG

>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EIAESPACHG 10
EIA+S AC G
Sbjct: 238 EIAQSEACFG 247


>sp|SYC_PYRHO|CYSTEINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EIAESPACHG 10
EIA+S AC G
Sbjct: 238 EIAQSEACFG 247


>sp|SYC_PYRFU|CYSTEINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EIAESPACHG 10
EIA+S AC G
Sbjct: 237 EIAQSEACFG 246


>sp|SYC_PYRAB|CYSTEINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 EIAESPACHG 10
EIA+S AC G
Sbjct: 238 EIAQSEACFG 247


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EIAESPACHG 10
EIA+S AC G
Sbjct: 238 EIAQSEACTG 247


>sp|PYRB_PYRAE|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum aerophilum

Query: 1 EIAESPACHG 10
EIAESP +G
Sbjct: 116 EIAESPVING 125


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 2 IAESPACHG 10
IAE PA HG
Sbjct: 262 IAERPALHG 270


>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 1 EIAESPACHG 10
E+AESP +G
Sbjct: 116 EVAESPVVNG 125


>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 1 EIAESPACHG 10
E+AESP +G
Sbjct: 116 EVAESPVING 125


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 1 EIAESPACHG 10
E+AESP +G
Sbjct: 116 EVAESPVING 125


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EIAESPACHG 10
EIA++ AC G
Sbjct: 238 EIAQTEACTG 247


>sp|RS13_METMP|SMALL ribosomal subunit protein uS13|Methanococcus maripaludis (strain

Query: 2 IAESPACHG 10
+ E PA HG
Sbjct: 67 VLEDPATHG 75


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 EIAESPA 7
E+AESPA
Sbjct: 380 ELAESPA 386


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 EIAESPA 7
E+AESPA
Sbjct: 380 ELAESPA 386


>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM 6242

Query: 2 IAESPACHG 10
+A+ PA HG
Sbjct: 267 VADEPALHG 275


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 2 IAESPACHG 10
IA PA HG
Sbjct: 260 IAPKPALHG 268


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 IAESPACH 9
+ + PACH
Sbjct: 95 MTDDPACH 102


>sp|PYRB_AERPE|ASPARTATE carbamoyltransferase catalytic subunit|Aeropyrum pernix (strain

Query: 1 EIAESPACHG 10
E+AE P +G
Sbjct: 118 EVAEKPVING 127


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 1 EIAESPACHG 10
+IA PA HG
Sbjct: 265 KIAPKPALHG 274


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 1 EIAESPACHG 10
IA PA HG
Sbjct: 265 RIAPKPALHG 274


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IAESPACHG 10
+ E PAC G
Sbjct: 595 VGECPACGG 603


>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 2 IAESPACHG 10
IA PA HG
Sbjct: 257 IAPKPALHG 265


>sp|PYRB_STAMF|ASPARTATE carbamoyltransferase catalytic subunit|Staphylothermus marinus

Query: 1 EIAESPACHG 10
E+AE+P +G
Sbjct: 119 ELAENPVING 128


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 EIAESPACHG 10
E ESP HG
Sbjct: 86 ESQESPGVHG 95


>sp|G1PDH_METAR|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocella arvoryzae (strain DSM 22066

Query: 1 EIAESPACHG 10
IA PA HG
Sbjct: 253 RIAPKPALHG 262


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EIAESPACHG 10
E+AES HG
Sbjct: 159 EVAESTTRHG 168


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 2 IAESPACHG 10
IA PA HG
Sbjct: 257 IAPKPALHG 265




22|SequenceR|115|106|LAVLKEIAES

>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 1 LAVLKEIAES 10
L +LKEIA+S
Sbjct: 385 LPILKEIADS 394


>sp|TRUD_THEGJ|PROBABLE tRNA pseudouridine synthase D|Thermococcus gammatolerans (strain

Query: 1 LAVLKEIAE 9
+AV+KEIA+
Sbjct: 59 MAVIKEIAK 67


>sp|Y1071_ARCFU|UNCHARACTERIZED protein AF_1071|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LAVLKEIAE 9
L VL+EIAE
Sbjct: 10 LKVLREIAE 18


>sp|GLCAE_SULAC|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LKEIAES 10
LKEIAES
Sbjct: 105 LKEIAES 111


>sp|IF2P_AERPE|PROBABLE translation initiation factor IF-2|Aeropyrum pernix (strain ATCC

Query: 1 LAVLKEIAE 9
L VL+EIAE
Sbjct: 585 LDVLREIAE 593


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 VLKEIAES 10
+LKEIAE+
Sbjct: 1568 ILKEIAEN 1575


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LAVLKEIAE 9
L +LKEIA+
Sbjct: 385 LPILKEIAD 393


>sp|GATA_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfurisphaera tokodaii (strain DSM

Query: 1 LAVLKEIAES 10
+AVLK+I E+
Sbjct: 248 IAVLKDIVEA 257


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 1 LAVLKEIAE 9
+ +LKE+AE
Sbjct: 42 VGILKEVAE 50




23|SequenceR|120|111|DLTNLLAVLK

>sp|RL1_PYRCJ|LARGE ribosomal subunit protein uL1|Pyrobaculum calidifontis (strain DSM

Query: 2 LTNLLAVLK 10
LTN+LAVL+
Sbjct: 179 LTNILAVLE 187


>sp|PUR2_METJA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NLLAVLK 10
NLLA+LK
Sbjct: 306 NLLAILK 312




24|SequenceR|125|116|EDIWRDLTNL

>sp|Y665_METJA|UNCHARACTERIZED protein MJ0665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DIWRDLTN 9
D+W DLTN
Sbjct: 5 DVWIDLTN 12


>sp|RL18E_METPE|LARGE ribosomal subunit protein eL18|Methanosphaerula palustris (strain

Query: 3 IWRDLTN 9
IWRD+ N
Sbjct: 30 IWRDIAN 36


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 2 DIWRDL 7
DIWR+L
Sbjct: 86 DIWREL 91


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EDIWR 5
EDIWR
Sbjct: 45 EDIWR 49


>sp|CMR4_PYRFU|CRISPR system Cmr endoribonuclease Cmr4|Pyrococcus furiosus (strain ATCC

Query: 1 EDIWRDLTNL 10
+D++RDL L
Sbjct: 193 DDVFRDLVEL 202


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 1 EDIWRDL 7
ED++RDL
Sbjct: 9 EDVFRDL 15


>sp|Y1105_METKA|PUTATIVE nickel insertion protein|Methanopyrus kandleri (strain AV19 /

Query: 1 EDIWRDLTNL 10
ED WR+L L
Sbjct: 89 EDRWRELPEL 98


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 IWRDLTNL 10
IW ++TNL
Sbjct: 207 IWVEVTNL 214


>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EDIWRD 6
ED+WR+
Sbjct: 73 EDLWRE 78


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter thermautotrophicus

Query: 2 DIWRDLTNL 10
D+W DLT +
Sbjct: 193 DVWTDLTGV 201


>sp|SYM_NANEQ|METHIONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EDIWRDLT 8
+D+W D T
Sbjct: 207 KDVWNDFT 214


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 EDIWRDLTNL 10
ED W + NL
Sbjct: 381 EDFWEEKRNL 390


>sp|RFCL_HYPBU|REPLICATION factor C large subunit|Hyperthermus butylicus (strain DSM 5456

Query: 1 EDIWR 5
EDIWR
Sbjct: 282 EDIWR 286


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDIWRDL 7
EDIW+ L
Sbjct: 474 EDIWQKL 480


>sp|CISY_PYRFU|CITRATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EDIWRDLTNL 10
ED++ D TN+
Sbjct: 12 EDVYIDQTNI 21


>sp|TRPC_THEVO|INDOLE-3-GLYCEROL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 RDLTNL 10
RDLTNL
Sbjct: 175 RDLTNL 180


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 EDIWRDLTNL 10
EDIWR L
Sbjct: 278 EDIWRAFDAL 287




25|SequenceR|130|121|DVPPTEDIWR

>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVPPTEDIW 9
DV PTE IW
Sbjct: 2 DVIPTEAIW 10


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 1 DVPPTEDIW 9
D+PP IW
Sbjct: 310 DIPPNTKIW 318


>sp|END4_METPE|PROBABLE endonuclease 4|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PTEDIWR 10
P E+IWR
Sbjct: 77 PKEEIWR 83


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 1 DVPPTEDIW 9
D+PP IW
Sbjct: 312 DIPPDTQIW 320


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPTEDIWR 10
P +ED+W+
Sbjct: 129 PVSEDVWK 136


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 PTEDIW 9
P EDIW
Sbjct: 232 PREDIW 237


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 PPTEDI 8
PPTED+
Sbjct: 13 PPTEDL 18


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DVPPTEDIW 9
D+PPTE ++
Sbjct: 499 DLPPTEKLY 507


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DVPPTEDIW 9
D+ P ED W
Sbjct: 143 DIKPREDTW 151


>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 1 DVPPTEDIWR 10
D P T++ WR
Sbjct: 505 DFPETKEEWR 514


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 DVPPTEDIW 9
D+PP +W
Sbjct: 314 DLPPNSKLW 322


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 DVPPTEDIW 9
DVP D+W
Sbjct: 134 DVPSYSDVW 142


>sp|KTHY_PYRFU|PROBABLE thymidylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DVPPTEDIWR 10
D+PP E I R
Sbjct: 136 DIPPREGIKR 145


>sp|Y1053_ARCFU|UNCHARACTERIZED protein AF_1053|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVPPTEDIWR 10
D PP ED+ R
Sbjct: 120 DEPPEEDVVR 129


>sp|RL1_METLZ|LARGE ribosomal subunit protein uL1|Methanocorpusculum labreanum (strain

Query: 2 VPPTEDI 8
+PPT+DI
Sbjct: 134 IPPTQDI 140


>sp|MEND_HALWD|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DVPPTEDIW 9
D PTEDI+
Sbjct: 553 DFEPTEDIY 561


>sp|Y1094_HALWD|PUTATIVE heme-binding protein HQ_1094A|Haloquadratum walsbyi (strain DSM

Query: 1 DVPPTEDIW 9
+VPPT++ W
Sbjct: 3 EVPPTDEGW 11


>sp|GVPC_HALMT|GAS vesicle protein C|Haloferax mediterranei (strain ATCC 33500

Query: 1 DVPPTED 7
D+PP ED
Sbjct: 270 DIPPIED 276


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain

Query: 1 DVPPTEDIW 9
D PPT++ W
Sbjct: 3 DAPPTDEGW 11


>sp|Y209_ARCFU|UNCHARACTERIZED protein AF_0209|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPTEDIW 9
PP ED W
Sbjct: 313 PPMEDAW 319


>sp|HMED_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 1 DVPPTEDIWR 10
++PP + WR
Sbjct: 344 NLPPKHEEWR 353


>sp|RS2_METTH|SMALL ribosomal subunit protein uS2|Methanothermobacter

Query: 1 DVPPTE 6
D+PPTE
Sbjct: 188 DIPPTE 193


>sp|Y348_METJA|UNCHARACTERIZED protein MJ0348|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PPTEDIWR 10
P TED W+
Sbjct: 215 PDTEDYWQ 222


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DVPPTEDIW 9
D+PPT +++
Sbjct: 494 DLPPTRELF 502


>sp|ACDG_METJA|ACETYL-COA decarbonylase/synthase complex subunit gamma|Methanocaldococcus

Query: 3 PPTEDIW 9
PP +++W
Sbjct: 65 PPVKEVW 71


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PPTEDIWR 10
PP ED W+
Sbjct: 164 PPLEDSWQ 171


>sp|IF5A_METTP|TRANSLATION initiation factor 5A|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DVPPTEDI 8
DVP TED+
Sbjct: 96 DVPITEDM 103


>sp|DPDH_PYRIL|D-PROLINE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PTEDIW 9
PT+D+W
Sbjct: 94 PTQDMW 99


>sp|NADE_METTH|NH(3)-DEPENDENT NAD(+) synthetase|Methanothermobacter thermautotrophicus (strain

Query: 3 PPTEDIW 9
PPT +W
Sbjct: 186 PPTAGLW 192




26|SequenceR|135|126|FRSPQDVPPT

>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 1 FRSPQDVP 8
FR PQDVP
Sbjct: 88 FRHPQDVP 95


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FEHPQDVP 94


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FEHPQDVP 94


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FEHPQDVP 94


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 54 FTHPQDVP 61


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FTHPQDVP 94


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FTHPQDVP 94


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 FRSPQDVPPT 10
FR+P+D+ P+
Sbjct: 202 FRAPEDLEPS 211


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FTHPQDVP 94


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FNHPQDVP 94


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FEHPQDVP 94


>sp|GLK_AERPE|GLUCOKINASE pernix (strain ATCC 700893

Query: 1 FRSPQDVP 8
+R+P+D+P
Sbjct: 311 YRNPEDLP 318


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FTHPQDVP 94


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FRSPQDV 7
FRSP+DV
Sbjct: 188 FRSPEDV 194


>sp|RNP2_THESM|RIBONUCLEASE P protein component 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 RSPQDVPPT 10
R P+ +PPT
Sbjct: 3 RKPKTLPPT 11


>sp|HIS8_PYRFU|HISTIDINOL-PHOSPHATE aminotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 SPQDVPP 9
SP D+PP
Sbjct: 28 SPYDLPP 34


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 FRSPQDVP 8
F PQDVP
Sbjct: 87 FTHPQDVP 94


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PQDVPPT 10
P DVPPT
Sbjct: 307 PSDVPPT 313


>sp|TDH_THEKO|L-THREONINE 3-dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FRSPQDVPP 9
+++P+D+PP
Sbjct: 137 WKNPKDMPP 145


>sp|SYA_NATPD|ALANINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 SPQDVPPT 10
SPQ+VP T
Sbjct: 784 SPQEVPAT 791


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SPQDVPP 9
+P DVPP
Sbjct: 518 NPGDVPP 524


>sp|TDH_THEON|L-THREONINE 3-dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 FRSPQDVPP 9
+++P+D+PP
Sbjct: 137 WKNPKDMPP 145


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FRSPQDVP 8
F PQD P
Sbjct: 22 FSEPQDTP 29


>sp|EF1A_METPE|ELONGATION factor 1-alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 4 PQDVPPT 10
P D+PPT
Sbjct: 307 PADIPPT 313


>sp|RL1_METLZ|LARGE ribosomal subunit protein uL1|Methanocorpusculum labreanum (strain

Query: 2 RSPQDVPPT 10
+ PQ +PPT
Sbjct: 129 KMPQPIPPT 137


>sp|HIS1_METTH|ATP phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 RSPQDVP 8
R P+D+P
Sbjct: 105 RGPEDIP 111


>sp|GGGPS_THEKO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 SPQDVPP 9
+PQ VPP
Sbjct: 181 APQPVPP 187


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 SPQDVP 8
SPQD+P
Sbjct: 302 SPQDLP 307


>sp|ASD_METTH|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanothermobacter

Query: 1 FRSPQDVPPT 10
FR P +PP+
Sbjct: 39 FRDPDRIPPS 48


>sp|GGGPS_THEGJ|GERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 SPQDVPP 9
+PQ VPP
Sbjct: 181 APQPVPP 187


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 RSPQDVP 8
R P+D+P
Sbjct: 173 RGPEDIP 179


>sp|GGGPS_STAMF|GERANYLGERANYLGLYCERYL phosphate synthase|Staphylothermus marinus (strain ATCC 43588

Query: 3 SPQDVPPT 10
SP+ VPP+
Sbjct: 179 SPKPVPPS 186


>sp|GGGPS_PYRAR|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 SPQDVPP 9
+PQ VPP
Sbjct: 173 APQPVPP 179


>sp|GGGPS_PYRAB|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 SPQDVPP 9
SP+ VPP
Sbjct: 182 SPEPVPP 188


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 3 SPQDVPPT 10
SP D+P T
Sbjct: 39 SPSDIPAT 46


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 FRSPQDV 7
+RSP+D+
Sbjct: 145 YRSPEDI 151


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 1 FRSPQDVP 8
+RSP+++P
Sbjct: 123 YRSPEELP 130




27|SequenceR|140|131|YAKNGFRSPQ

>sp|RL15_SACS2|LARGE ribosomal subunit protein uL15|Saccharolobus solfataricus (strain

Query: 1 YAKNGFRSP 9
Y K+GFR+P
Sbjct: 55 YGKHGFRNP 63


>sp|RL15_PYRNV|LARGE ribosomal subunit protein uL15|Pyrobaculum neutrophilum (strain

Query: 1 YAKNGFRSPQ 10
Y K+GF+ PQ
Sbjct: 61 YGKHGFKQPQ 70


>sp|RL15_METS3|LARGE ribosomal subunit protein uL15|Methanobrevibacter smithii (strain

Query: 1 YAKNGFRSPQ 10
Y K+GF+ PQ
Sbjct: 55 YGKHGFKRPQ 64


>sp|RL15_SULAC|LARGE ribosomal subunit protein uL15|Sulfolobus acidocaldarius (strain

Query: 1 YAKNGFRSP 9
Y K+GFR+P
Sbjct: 55 YGKHGFRNP 63


>sp|RL15_PYRCJ|LARGE ribosomal subunit protein uL15|Pyrobaculum calidifontis (strain

Query: 1 YAKNGFRSPQ 10
Y K+GF+ P+
Sbjct: 61 YGKHGFKQPE 70


>sp|COBD_METVS|PROBABLE cobalamin biosynthesis protein CobD|Methanococcus vannielii (strain

Query: 1 YAKNGFRSP 9
Y K GF++P
Sbjct: 238 YLKEGFKTP 246


>sp|RL15_METMA|LARGE ribosomal subunit protein uL15|Methanosarcina mazei (strain ATCC

Query: 1 YAKNGFRSP 9
Y K+GF+ P
Sbjct: 49 YGKHGFKRP 57


>sp|RL15_METAC|LARGE ribosomal subunit protein uL15|Methanosarcina acetivorans (strain

Query: 1 YAKNGFRSP 9
Y K+GF+ P
Sbjct: 49 YGKHGFKRP 57


>sp|RL15_NATPD|LARGE ribosomal subunit protein uL15|Natronomonas pharaonis (strain

Query: 2 AKNGFRSPQ 10
K+GF+ PQ
Sbjct: 47 GKSGFKRPQ 55


>sp|RL15_HALMA|LARGE ribosomal subunit protein uL15|Haloarcula marismortui (strain

Query: 2 AKNGFRSPQ 10
K+GF+ PQ
Sbjct: 48 GKSGFKRPQ 56


>sp|RL15_PYRAE|LARGE ribosomal subunit protein uL15|Pyrobaculum aerophilum (strain

Query: 1 YAKNGFRSP 9
Y K+GF+ P
Sbjct: 61 YGKHGFKQP 69


>sp|RL15_HYPBU|LARGE ribosomal subunit protein uL15|Hyperthermus butylicus (strain DSM

Query: 1 YAKNGFRSPQ 10
+ K+GF PQ
Sbjct: 57 FGKHGFNRPQ 66


>sp|RL15_PYRAR|LARGE ribosomal subunit protein uL15|Pyrobaculum arsenaticum (strain

Query: 1 YAKNGFRSP 9
Y K+GF+ P
Sbjct: 61 YGKHGFKQP 69


>sp|SUCC1_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 1 YAKNGFRSPQ 10
+AK+G R P+
Sbjct: 12 FAKHGIRVPR 21


>sp|RL15_METTH|LARGE ribosomal subunit protein uL15|Methanothermobacter

Query: 1 YAKNGFRSPQ 10
+ K GF+ PQ
Sbjct: 55 FGKYGFKRPQ 64


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 1 YAKNGFRSPQ 10
Y K GF P+
Sbjct: 57 YGKKGFNPPR 66


>sp|RL15_PYRIL|LARGE ribosomal subunit protein uL15|Pyrobaculum islandicum (strain DSM

Query: 1 YAKNGFRSP 9
Y K+GF+ P
Sbjct: 61 YGKHGFKQP 69


>sp|RL15_METST|LARGE ribosomal subunit protein uL15|Methanosphaera stadtmanae (strain

Query: 1 YAKNGFRSPQ 10
+ K GF+ PQ
Sbjct: 55 FGKYGFKRPQ 64


>sp|RL15_DESA1|LARGE ribosomal subunit protein uL15|Desulfurococcus amylolyticus

Query: 1 YAKNGFR 7
Y K+GFR
Sbjct: 57 YGKHGFR 63


>sp|Y1514_ARCFU|UNCHARACTERIZED protein AF_1514|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AKNGFRSPQ 10
+K G+R+P+
Sbjct: 42 SKTGYRAPE 50


>sp|RL15_STAMF|LARGE ribosomal subunit protein uL15|Staphylothermus marinus (strain

Query: 1 YAKNGFRSP 9
Y K+GF P
Sbjct: 57 YGKHGFTRP 65


>sp|RL15_METBF|LARGE ribosomal subunit protein uL15|Methanosarcina barkeri (strain

Query: 1 YAKNGFRSP 9
Y K+GF P
Sbjct: 49 YGKHGFNLP 57




28|SequenceR|145|136|AYWTRYAKNG

>sp|COFD_METHJ|2-PHOSPHO-L-LACTATE transferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YWTRYAKN 9
YW RY N
Sbjct: 151 YWVRYRGN 158


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WTRYAKN 9
WT YA+N
Sbjct: 272 WTSYAEN 278


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 YWTRYAKNG 10
Y +YAKNG
Sbjct: 180 YVEKYAKNG 188


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 YWTRYAKNG 10
Y +YAKNG
Sbjct: 180 YVEKYAKNG 188


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 WTRYAKN 9
W++Y KN
Sbjct: 264 WSKYVKN 270


>sp|BACR1_HALWD|BACTERIORHODOPSIN-I walsbyi (strain DSM 16790

Query: 2 YWTRYA 7
YW RYA
Sbjct: 87 YWARYA 92


>sp|BACR1_HALWC|BACTERIORHODOPSIN-I walsbyi (strain DSM 16854

Query: 2 YWTRYA 7
YW RYA
Sbjct: 87 YWARYA 92


>sp|BACR2_HALMA|BACTERIORHODOPSIN-II marismortui (strain ATCC 43049

Query: 2 YWTRYA 7
YW RYA
Sbjct: 85 YWARYA 90


>sp|G1PDH_NITMS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Nitrosopumilus maritimus (strain SCM1)

Query: 4 TRYAKNG 10
++YAKNG
Sbjct: 218 SKYAKNG 224


>sp|BACRM_HALWD|BACTERIORHODOPSIN-II-LIKE protein|Haloquadratum walsbyi (strain DSM 16790

Query: 2 YWTRYA 7
YW RYA
Sbjct: 78 YWARYA 83


>sp|RGYR2_SULTO|REVERSE gyrase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 YWTRYAKN 9
+W Y KN
Sbjct: 819 FWKEYCKN 826


>sp|BACR_HALSA|BACTERIORHODOPSIN salinarum (strain ATCC 700922

Query: 2 YWTRYA 7
YW RYA
Sbjct: 92 YWARYA 97


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YWTRYAKN 9
YW RY N
Sbjct: 757 YWHRYVSN 764


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AYWTRYAK 8
AY+T +AK
Sbjct: 403 AYYTEFAK 410


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 2 YWTRY 6
YW RY
Sbjct: 259 YWARY 263


>sp|Y924_ARCFU|UNCHARACTERIZED protein AF_0924|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AYWTRYAK 8
A WT YAK
Sbjct: 143 ANWTFYAK 150


>sp|RL18_METAR|LARGE ribosomal subunit protein uL18|Methanocella arvoryzae (strain DSM

Query: 3 WTRYAKNG 10
+T+Y KNG
Sbjct: 157 YTQYEKNG 164


>sp|BACR_HALS4|BACTERIORHODOPSIN sp. (strain arg-4)

Query: 2 YWTRYAK 8
YW RYA
Sbjct: 87 YWARYAD 93




29|SequenceR|150|141|EEDLKAYWTR

>sp|FEN_THEVO|FLAP endonuclease 1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EEDLKAYWTR 10
EE+LK Y++R
Sbjct: 113 EENLKQYYSR 122


>sp|SYW_METJA|TRYPTOPHAN--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DLKAYWTR 10
DL+AYW R
Sbjct: 106 DLEAYWAR 113


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 1 EEDLKAYWT 9
EEDL AY++
Sbjct: 285 EEDLPAYYS 293


>sp|RAD50_THEKO|DNA double-strand break repair Rad50|Thermococcus kodakarensis (strain

Query: 1 EEDLKAYW 8
EEDLKAY
Sbjct: 358 EEDLKAYQ 365


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 KAYWTR 10
KA+WTR
Sbjct: 26 KAFWTR 31


>sp|KDPC_HALSA|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 EDLKAYWTR 10
ED++ +W+R
Sbjct: 69 EDVQYFWSR 77


>sp|KDPC_HALS3|POTASSIUM-TRANSPORTING ATPase KdpC subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 EDLKAYWTR 10
ED++ +W+R
Sbjct: 69 EDVQYFWSR 77


>sp|LEUC_NATPD|3-ISOPROPYLMALATE dehydratase large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EDLKAYW 8
E+LK YW
Sbjct: 258 EELKPYW 264


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EDLKAYWTR 10
ED+KAY R
Sbjct: 407 EDVKAYLLR 415


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EEDLKAYW 8
E++LK+YW
Sbjct: 158 EKELKSYW 165


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 1 EEDLKAYWTR 10
EE+LK Y+ +
Sbjct: 436 EEELKTYYEK 445


>sp|CBIM_METJA|PUTATIVE cobalt transport protein CbiM|Methanocaldococcus jannaschii (strain

Query: 1 EEDLKAYWT 9
EE+LK Y T
Sbjct: 218 EEELKPYLT 226


>sp|LEUC_HALMA|3-ISOPROPYLMALATE dehydratase large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 EDLKAYW 8
E+LK YW
Sbjct: 258 EELKPYW 264


>sp|VPB21_SULTO|PUTATIVE antitoxin VapB21|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EDLKAYWTR 10
EDLK W R
Sbjct: 60 EDLKKMWER 68


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEDLKAYWT 9
E D+ YW+
Sbjct: 785 EHDVNLYWS 793


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 2 EDLKAYW 8
ED+ +YW
Sbjct: 82 EDIGSYW 88


>sp|SUCD2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit alpha|Archaeoglobus fulgidus (strain

Query: 2 EDLKAYW 8
++LK YW
Sbjct: 104 DELKMYW 110


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 4 LKAYWTR 10
++AYW R
Sbjct: 535 MRAYWVR 541


>sp|Y1295_METJA|UNCHARACTERIZED protein MJ1295|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EEDLKAYW 8
+E+LK YW
Sbjct: 55 KEELKKYW 62


>sp|ALF1_PYRAB|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus abyssi (strain GE5 /

Query: 4 LKAYWT 9
+K YWT
Sbjct: 190 IKTYWT 195


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EEDLKAYWTR 10
E +K YW+R
Sbjct: 499 ERYIKTYWSR 508




30|SequenceR|155|146|VLNEAEEDLK

>sp|Y771_ARCFU|UNCHARACTERIZED protein AF_0771|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LNEAEEDL 9
LN+AE+DL
Sbjct: 57 LNDAEDDL 64


>sp|SYP_SACI7|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VLNEAEEDLK 10
VLNE +EDL+
Sbjct: 388 VLNEIQEDLR 397


>sp|SYP_SACI2|PROLINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VLNEAEEDLK 10
VLNE +EDL+
Sbjct: 388 VLNEIQEDLR 397


>sp|SYP_SACI1|PROLINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VLNEAEEDLK 10
VLNE +EDL+
Sbjct: 388 VLNEIQEDLR 397


>sp|SYP_SACI6|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VLNEAEEDLK 10
VLNE +EDL+
Sbjct: 388 VLNEIQEDLR 397


>sp|SYP_SACI4|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VLNEAEEDLK 10
VLNE +EDL+
Sbjct: 388 VLNEIQEDLR 397


>sp|SYP_SACI3|PROLINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VLNEAEEDLK 10
VLNE +EDL+
Sbjct: 388 VLNEIQEDLR 397


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 VLNEAEEDL 9
++NEAEE+L
Sbjct: 433 LINEAEEEL 441


>sp|SYP_SACS2|PROLINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VLNEAEEDLK 10
+LNE +EDL+
Sbjct: 388 LLNEIQEDLR 397


>sp|RL12_HALSA|LARGE ribosomal subunit protein P1|Halobacterium salinarum (strain ATCC

Query: 1 VLNEAEEDLK 10
+LNEA+E+L
Sbjct: 9 ILNEADEELT 18


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LNEAEEDLK 10
LN+AEE LK
Sbjct: 260 LNKAEEALK 268




31|SequenceR|160|151|PVVTAVLNEA

>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PVVTAVLNEA 10
PVVTAVL E+
Sbjct: 26 PVVTAVLAES 35


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 PVVTAVLNE 9
P++T+VLNE
Sbjct: 49 PLITSVLNE 57




32|SequenceR|165|156|AALHTPVVTA

>sp|SYY2_PYRAE|TYROSINE--TRNA ligase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ALHTPVVTA 10
ALHTP++T+
Sbjct: 189 ALHTPIITS 197


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ALHTPVVTA 10
A+HTP++++
Sbjct: 208 AIHTPIISS 216


>sp|KAE1B_METTH|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 AALHTPVV 8
A +HTPV+
Sbjct: 395 AGVHTPVL 402


>sp|SYY_HALSA|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LHTPVV 8
LHTP++
Sbjct: 198 LHTPII 203


>sp|SYY_HALS3|TYROSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LHTPVV 8
LHTP++
Sbjct: 198 LHTPII 203


>sp|SYY_METKA|TYROSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 LHTPVV 8
LHTP++
Sbjct: 202 LHTPII 207




33|SequenceR|170|161|VEPVAAALHT

>sp|AROK_PYRFU|SHIKIMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EPVAAALH 9
EP++ ALH
Sbjct: 226 EPISKALH 233


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 3 PVAAALHT 10
P+AA+L+T
Sbjct: 7 PIAASLYT 14


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 EPVAAALHT 10
+PVA+ +HT
Sbjct: 164 DPVASIIHT 172




34|SequenceR|175|166|KLYVAVEPVA

>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KLYVAVEPV 9
KLY++VEP+
Sbjct: 493 KLYISVEPL 501


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 KLYVAVEPV 9
KLY++VEP+
Sbjct: 491 KLYISVEPL 499


>sp|EF2_AERPE|ELONGATION factor 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLYVAVEPV 9
KLY++VEP+
Sbjct: 491 KLYISVEPL 499


>sp|EF2_SULAC|ELONGATION factor 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLYVAVEPV 9
KLY++VEP+
Sbjct: 493 KLYISVEPL 501


>sp|EF2_IGNH4|ELONGATION factor 2|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KLYVAVEPV 9
KLY+ VEP+
Sbjct: 494 KLYITVEPL 502


>sp|EF2_METS5|ELONGATION factor 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYISVEPL 500


>sp|EF2_HALMD|ELONGATION factor 2|Halomicrobium mukohataei (strain ATCC 700874

Query: 1 KLYVAVEPV 9
+ Y++VEP+
Sbjct: 488 RFYISVEPL 496


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LYVAVEPVA 10
+YV V+PVA
Sbjct: 497 VYVKVDPVA 505


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KLYVAVEPV 9
+ Y++VEP+
Sbjct: 487 RFYISVEPL 495


>sp|GVPL2_HALSA|GAS vesicle protein L2|Halobacterium salinarum (strain ATCC 700922

Query: 2 LYVAVEPVA 10
L AVEPVA
Sbjct: 194 LSAAVEPVA 202


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLYVAVEPV 9
KLY VEP+
Sbjct: 489 KLYFVVEPL 497


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 1 KLYVAVEPV 9
+ YV VEP+
Sbjct: 487 RFYVVVEPL 495


>sp|TPIS_METBU|TRIOSEPHOSPHATE isomerase|Methanococcoides burtonii (strain DSM 6242

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 136 YVAVEP 141


>sp|EF2_SACS2|ELONGATION factor 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|TPIS_METLZ|TRIOSEPHOSPHATE isomerase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 136 YVAVEP 141


>sp|EF2_SACI7|ELONGATION factor 2|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|EF2_SACI6|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.4 /

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|EF2_SACI4|ELONGATION factor 2|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|EF2_SACI3|ELONGATION factor 2|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|EF2_SACI2|ELONGATION factor 2|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|EF2_SACI1|ELONGATION factor 2|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 KLYVAVEPV 9
K Y++VEP+
Sbjct: 492 KFYLSVEPL 500


>sp|TPIS_THEKO|TRIOSEPHOSPHATE isomerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 140 YVAVEP 145


>sp|TPIS_PYRHO|TRIOSEPHOSPHATE isomerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 139 YVAVEP 144


>sp|TPIS_PYRAB|TRIOSEPHOSPHATE isomerase|Pyrococcus abyssi (strain GE5 /

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 139 YVAVEP 144


>sp|TPIS_PYRWO|TRIOSEPHOSPHATE isomerase|Pyrococcus woesei

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 140 YVAVEP 145


>sp|TPIS_PYRFU|TRIOSEPHOSPHATE isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 YVAVEP 8
YVAVEP
Sbjct: 140 YVAVEP 145


>sp|TPIS_METJA|TRIOSEPHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YVAVEP 8
Y+AVEP
Sbjct: 134 YIAVEP 139


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain

Query: 1 KLYVAVEPVA 10
+ Y+AV PVA
Sbjct: 47 RRYLAVTPVA 56


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain

Query: 1 KLYVAVEPVA 10
+ Y+AV PVA
Sbjct: 47 RRYLAVTPVA 56


>sp|TPIS_METMA|TRIOSEPHOSPHATE isomerase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YVAVEP 8
YVA+EP
Sbjct: 137 YVAIEP 142


>sp|TPIS_METBF|TRIOSEPHOSPHATE isomerase|Methanosarcina barkeri (strain Fusaro /

Query: 3 YVAVEP 8
YVA+EP
Sbjct: 137 YVAIEP 142


>sp|TPIS_METAC|TRIOSEPHOSPHATE isomerase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YVAVEP 8
YVA+EP
Sbjct: 137 YVAIEP 142


>sp|TPIS_METMJ|TRIOSEPHOSPHATE isomerase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 YVAVEP 8
YVA+EP
Sbjct: 137 YVAIEP 142




35|SequenceR|180|171|NGVSEKLYVA

>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NGVSEKLYVA 10
NG E+LYVA
Sbjct: 259 NGDRERLYVA 268


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NGVSEKLYVA 10
+GVS++LY A
Sbjct: 372 SGVSDQLYAA 381


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 1 NGVSEKLYVA 10
+GVS++LY A
Sbjct: 371 SGVSDQLYSA 380


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 NGVSEKLYVA 10
+GVS++LY A
Sbjct: 371 SGVSDQLYSA 380


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 2 GVSEKLYVA 10
GV EK+Y A
Sbjct: 545 GVVEKIYTA 553


>sp|FAU1_THEGJ|PROBABLE ribonuclease FAU-1|Thermococcus gammatolerans (strain DSM 15229

Query: 3 VSEKLYVA 10
+SEKLY A
Sbjct: 452 ISEKLYKA 459




36|SequenceR|185|176|DIRTSNGVSE

>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DIRTSNGVSE 10
DIR NGV++
Sbjct: 835 DIRNINGVAK 844


>sp|Y1200_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB12000|Pyrococcus abyssi (strain GE5 /

Query: 4 TSNGVSE 10
TSNG+SE
Sbjct: 200 TSNGLSE 206


>sp|CS3HD_PYRFU|CRISPR-ASSOCIATED endonuclease Cas3-HD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IRTSNGVSE 10
+RT NGV E
Sbjct: 142 LRTFNGVME 150




37|SequenceR|190|181|HGTGYDIRTS

>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain GE5

Query: 4 GYDIRTS 10
GYDIRT+
Sbjct: 353 GYDIRTA 359


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 4 GYDIRTS 10
GYD+RT+
Sbjct: 349 GYDVRTA 355


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 4 GYDIRTS 10
GYD+RT+
Sbjct: 352 GYDVRTA 358


>sp|QUEE_THEAC|7-CARBOXY-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GTGYDIR 8
GTGY++R
Sbjct: 187 GTGYNVR 193


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 4 GYDIRTS 10
GYD+RT+
Sbjct: 349 GYDVRTA 355


>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 3 TGYDIRT 9
TGYD++T
Sbjct: 163 TGYDVKT 169


>sp|Y853_THEKO|UPF0284 protein TK0853|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 GYDIRTS 10
GYD RTS
Sbjct: 155 GYDARTS 161


>sp|HMEB_ARCFU|HDR-LIKE menaquinol oxidoreductase integral membrane|Archaeoglobus fulgidus

Query: 3 TGYDIR 8
TGYD+R
Sbjct: 298 TGYDLR 303


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 4 GYDIRTS 10
GYDI++S
Sbjct: 217 GYDIKSS 223


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GTGYDIRTS 10
GT D+RTS
Sbjct: 382 GTNIDMRTS 390


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 4 GYDIRTS 10
GYD RTS
Sbjct: 47 GYDTRTS 53


>sp|IXTPA_PYRFU|DITP/XTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGTGYD 6
HG GYD
Sbjct: 137 HGFGYD 142


>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 4 GYDIRT 9
GYDI+T
Sbjct: 162 GYDIKT 167


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GYDIRT 9
GYD+RT
Sbjct: 185 GYDLRT 190


>sp|IXTPA_PYRHO|DITP/XTP pyrophosphatase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HGTGYD 6
HG GYD
Sbjct: 138 HGFGYD 143


>sp|PYRK_THEVO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma volcanium

Query: 1 HGTGYDIR 8
+G G+D+R
Sbjct: 83 YGNGFDVR 90


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GTGYDIRT 9
G GYD +T
Sbjct: 203 GDGYDAKT 210


>sp|END4_METMJ|PROBABLE endonuclease 4|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GTGYDIRTS 10
GYD+RT+
Sbjct: 184 AAGYDLRTA 192


>sp|DPS_HALSA|DNA protection during starvation protein|Halobacterium salinarum

Query: 5 YDIRTS 10
YDIRTS
Sbjct: 113 YDIRTS 118


>sp|END4_THEAC|PROBABLE endonuclease 4|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GTGYDIRTS 10
+GYD+R S
Sbjct: 187 ASGYDLRDS 195


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 2 GTGYDIRT 9
G GYD +T
Sbjct: 200 GDGYDAKT 207


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 HGTGYD 6
HG GYD
Sbjct: 220 HGDGYD 225


>sp|CBIA_SULTO|COBYRINATE a,c-diamide synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 HGTGYDI 7
+G GYDI
Sbjct: 77 YGKGYDI 83




38|SequenceR|195|186|AFAAEHGTGY

>sp|PYRE_PYRIL|OROTATE phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 AAEHGTG 9
A EHGTG
Sbjct: 88 AKEHGTG 94


>sp|GPMI_HALSA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Halobacterium salinarum (strain ATCC 700922

Query: 1 AFAAEHGTG 9
A A EHGTG
Sbjct: 165 AVADEHGTG 173


>sp|VORA_METTM|KETOISOVALERATE oxidoreductase subunit VorA|Methanothermobacter marburgensis

Query: 2 FAAEHGTG 9
A EHGTG
Sbjct: 410 IAKEHGTG 417


>sp|PNPH_PYRFU|6-OXOPURINE nucleoside phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AFAAEHGTGY 10
AF A HG G+
Sbjct: 45 AFLARHGKGH 54


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 AFAAEHGTG 9
F EHG G
Sbjct: 101 GFGMEHGVG 109


>sp|PYRE_PYRHO|OROTATE phosphoribosyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 EHGTG 9
EHGTG
Sbjct: 98 EHGTG 102


>sp|PYRE_PYRAY|OROTATE phosphoribosyltransferase|Pyrococcus abyssi

Query: 5 EHGTG 9
EHGTG
Sbjct: 96 EHGTG 100


>sp|PYRE_PYRAB|OROTATE phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 5 EHGTG 9
EHGTG
Sbjct: 96 EHGTG 100


>sp|PYRE_PYRFU|OROTATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 EHGTG 9
EHGTG
Sbjct: 96 EHGTG 100


>sp|GPMI_HALMA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AFAAEHGTGY 10
A EHGTG+
Sbjct: 179 AHVEEHGTGH 188


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 AFAAEHGTGY 10
AFA EH Y
Sbjct: 58 AFAKEHNIQY 67


>sp|LEU1_METTH|PROBABLE 2-isopropylmalate synthase|Methanothermobacter thermautotrophicus

Query: 2 FAAEHG 7
+AAEHG
Sbjct: 135 YAAEHG 140




39|SequenceR|200|191|CCLFAAFAAE

>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 1 CCLFAAFAA 9
C LFAA+ A
Sbjct: 146 CMLFAAYLA 154


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CLFAAFAA 9
CL+ FAA
Sbjct: 98 CLYCGFAA 105


>sp|DGGGP_METAC|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 CLFAAFAA 9
CL A FAA
Sbjct: 17 CLMAGFAA 24


>sp|DGGGP_METBF|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 CLFAAFAA 9
CL A FAA
Sbjct: 17 CLMAGFAA 24




40|SequenceR|205|196|GIKCLCCLFA

>sp|DMSR_HALSA|DIMETHYL sulfoxide reductase transcriptional activator|Halobacterium

Query: 4 CLCCLFA 10
CLCC+F+
Sbjct: 82 CLCCVFS 88


>sp|Y785_METJA|UNCHARACTERIZED protein MJ0785|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KCLCCLFA 10
KCL C FA
Sbjct: 97 KCLYCGFA 104


>sp|ELP3_METJA|TRNA uridine(34) acetyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 GIKCLC 6
GIKC C
Sbjct: 387 GIKCKC 392


>sp|Y3503_METJA|UNCHARACTERIZED protein MJECL03|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IKCLCCLF 9
IKC CLF
Sbjct: 98 IKCNLCLF 105


>sp|CAS4_AERPE|CRISPR-ASSOCIATED exonuclease Cas4|Aeropyrum pernix (strain ATCC 700893

Query: 1 GIKCLCCLF 9
G KC+ C F
Sbjct: 176 GRKCVACRF 184


>sp|UDP_THEKO|URIDINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 CLCCLFA 10
C+C +FA
Sbjct: 224 CVCAVFA 230


>sp|PYRI_METB6|ASPARTATE carbamoyltransferase regulatory chain|Methanoregula boonei (strain

Query: 1 GIKCLCC 7
G++CL C
Sbjct: 146 GLRCLYC 152


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 3 KCLCC 7
+C+CC
Sbjct: 63 RCICC 67




41|SequenceR|210|201|DVRLVGIKCL

>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVRLVGIK 8
DVRL+G++
Sbjct: 255 DVRLIGVE 262


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 VRLVGIKCL 10
++LVGIKC+
Sbjct: 47 LQLVGIKCV 55


>sp|TRPB_METLZ|TRYPTOPHAN synthase beta chain|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DVRLVGIK 8
DVR+VG++
Sbjct: 247 DVRMVGVE 254


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RLVGIKCL 10
R +GIKC+
Sbjct: 24 RDIGIKCM 31


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRLVGIKCL 10
++ +GIKC+
Sbjct: 526 LKAIGIKCM 534


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VRLVGIKCL 10
V+LVG CL
Sbjct: 120 VKLVGPNCL 128


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVRLVGIKCL 10
++R++G CL
Sbjct: 124 NIRIIGPNCL 133


>sp|Y351_METJA|UNCHARACTERIZED protein MJ0351|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVRLVGIKCL 10
D+R+VG+K L
Sbjct: 138 DLRVVGVKKL 147




42|SequenceR|215|206|IAIQDDVRLV

>sp|G3P_PYRCJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IAIQDDVRLV 10
+A+QDD+R+V
Sbjct: 20 VALQDDMRVV 29


>sp|LEUC1_METKA|3-ISOPROPYLMALATE dehydratase large subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 3 IQDDVRLV 10
+ DDVRL+
Sbjct: 318 VHDDVRLI 325


>sp|TRPB1_ARCFU|TRYPTOPHAN synthase beta chain 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IQDDVRLV 10
+ DDVRL+
Sbjct: 252 LNDDVRLI 259


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IAIQDDVRLV 10
+A+QDD+ ++
Sbjct: 22 VALQDDMEII 31




43|SequenceR|220|211|FVKFVIAIQD

***** No hits found ******


44|SequenceR|225|216|ELYRNFVKFV

>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 1 ELYRNFVK 8
ELYRNF++
Sbjct: 172 ELYRNFIE 179


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 ELYRNFVKFV 10
E++R F KFV
Sbjct: 609 EMFRKFAKFV 618


>sp|CDC61_SULTO|ORC1-TYPE DNA replication protein 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELYRNFVKFV 10
ELYR F+K V
Sbjct: 125 ELYRRFIKKV 134


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELYRNFVK 8
+LYR+FVK
Sbjct: 182 KLYRSFVK 189


>sp|AATB2_METHJ|A-TYPE ATP synthase subunit B|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ELYRNFVKF 9
EL RN++KF
Sbjct: 402 ELDRNYLKF 410


>sp|PRIS_PYRAE|DNA primase small subunit PriS|Pyrobaculum aerophilum (strain ATCC

Query: 3 YRNFVKF 9
YRNF KF
Sbjct: 11 YRNFAKF 17


>sp|RPO1N_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus solfataricus (strain

Query: 2 LYRNFVKFV 10
L+R F++FV
Sbjct: 631 LFRVFIRFV 639


>sp|RS24_METKA|SMALL ribosomal subunit protein eS24|Methanopyrus kandleri (strain AV19

Query: 2 LYRNFVKFV 10
LYR VKFV
Sbjct: 14 LYRKEVKFV 22


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 LYRNFVKFV 10
L+R F++FV
Sbjct: 631 LFRVFIRFV 639


>sp|Y367_METJA|PROBABLE integrase/recombinase protein MJ0367|Methanocaldococcus jannaschii

Query: 1 ELYRNFVKF 9
EL RN+V+F
Sbjct: 217 ELLRNYVQF 225


>sp|RLME_METAR|RIBOSOMAL RNA large subunit methyltransferase|Methanocella arvoryzae (strain

Query: 1 ELYRNFVKFV 10
+LY N+VK V
Sbjct: 153 DLYENYVKEV 162


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM 12597

Query: 1 ELYRNFVK 8
E+Y NFVK
Sbjct: 237 EIYENFVK 244


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LYRNFVKF 9
LYRNF F
Sbjct: 22 LYRNFKTF 29


>sp|RF1_SACS2|PEPTIDE chain release factor subunit|Saccharolobus solfataricus (strain

Query: 1 ELYRNFVKFV 10
E+Y NF+K V
Sbjct: 189 EMYHNFLKEV 198


>sp|GLNA_PYRAB|GLUTAMINE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELYRNFVKF 9
E Y+NF+++
Sbjct: 396 EAYKNFIEY 404


>sp|PRIS_PYRNV|DNA primase small subunit PriS|Pyrobaculum neutrophilum (strain DSM

Query: 3 YRNFVKF 9
YRN+ KF
Sbjct: 11 YRNYAKF 17


>sp|RL24E_AERPE|LARGE ribosomal subunit protein eL24|Aeropyrum pernix (strain ATCC

Query: 3 YRNFVKF 9
Y+NFVK
Sbjct: 38 YKNFVKL 44


>sp|PRIS_PYRIL|DNA primase small subunit PriS|Pyrobaculum islandicum (strain DSM

Query: 3 YRNFVKF 9
YRN+ KF
Sbjct: 11 YRNYAKF 17


>sp|PRIS_PYRAR|DNA primase small subunit PriS|Pyrobaculum arsenaticum (strain DSM

Query: 3 YRNFVKF 9
YRN+ KF
Sbjct: 11 YRNYAKF 17


>sp|MFNC_METJA|(5-FORMYLFURAN-3-YL)METHYL phosphate transaminase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 YRNFVKFV 10
Y+NF++F+
Sbjct: 126 YKNFIRFL 133


>sp|Y651_METJA|PUTATIVE protease MJ0651|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELYRNFVKFV 10
E Y +FVK+V
Sbjct: 203 ETYMDFVKWV 212


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 ELYRNFVKFV 10
E Y+ FVK V
Sbjct: 235 EFYKEFVKLV 244


>sp|GUAAA_SULAC|GMP synthase [glutamine-hydrolyzing] subunit A|Sulfolobus

Query: 1 ELYRNFVKF 9
E+++NF+K
Sbjct: 177 EVFKNFIKI 185




45|SequenceR|230|221|LKRMVELYRN

>sp|PRNK_THEKO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase TK1956|Thermococcus kodakarensis (strain ATCC

Query: 1 LKRMVELYRN 10
+KRMVE+ RN
Sbjct: 115 VKRMVEIARN 124


>sp|LYSK_PYRFU|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrococcus furiosus

Query: 1 LKRMVELY 8
LKR+VE+Y
Sbjct: 11 LKRLVEIY 18


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 1 LKRMVELYRN 10
LKR+++LY N
Sbjct: 287 LKRIMDLYSN 296


>sp|NUCS_PYRAE|ENDONUCLEASE NucS|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LKRMVELYR 9
L R VELYR
Sbjct: 192 LARYVELYR 200


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 2 KRMVELYRN 10
KR VE+Y+N
Sbjct: 643 KRRVEIYQN 651


>sp|LHRC_SACS2|ATP-DEPENDENT helicase Lhr-Core|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LKRMVELYRN 10
L M+EL+RN
Sbjct: 187 LSAMLELFRN 196


>sp|DAPA_METLZ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 KRMVELY 8
KR+VE+Y
Sbjct: 219 KRLVEMY 225


>sp|Y540_ARCFU|UNCHARACTERIZED protein AF_0540|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LKRMVELYRN 10
LKR +ELY++
Sbjct: 144 LKRELELYKS 153


>sp|HUTI_PICTO|IMIDAZOLONEPROPIONASE torridus (strain ATCC 700027

Query: 1 LKRMVELYRN 10
+KR+ +YRN
Sbjct: 147 IKRIKSIYRN 156


>sp|GUAAA_ARCFU|GMP synthase [glutamine-hydrolyzing] subunit A|Archaeoglobus fulgidus

Query: 5 VELYRN 10
VELYRN
Sbjct: 171 VELYRN 176


>sp|NUCS_METJA|ENDONUCLEASE NucS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKRMVELYRN 10
LKR VE ++N
Sbjct: 194 LKRYVEYFKN 203


>sp|RS15_META3|SMALL ribosomal subunit protein uS15|Methanococcus aeolicus (strain ATCC

Query: 1 LKRMVELYRN 10
++R+V+ YRN
Sbjct: 122 IRRLVKYYRN 131


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 1 LKRMVELYR 9
+KR ELYR
Sbjct: 120 IKRAEELYR 128




46|SequenceR|235|226|RYTKQLKRMV

>sp|DHE_HALSI|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (Halobacterium halobium)

Query: 1 RYTKQLKRMV 10
RYT+ ++RM+
Sbjct: 126 RYTEGIRRMI 135


>sp|DHE_HALSA|GLUTAMATE dehydrogenase A2|Halobacterium salinarum (strain ATCC 700922

Query: 1 RYTKQLKRMV 10
RYT+ ++RM+
Sbjct: 126 RYTEGIRRMI 135


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 RYTKQLKR 8
RYT+ LKR
Sbjct: 414 RYTRALKR 421


>sp|RS17E_SACS2|SMALL ribosomal subunit protein eS17|Saccharolobus solfataricus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|RS17E_SACI7|SMALL ribosomal subunit protein eS17|Saccharolobus islandicus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|RS17E_SACI6|SMALL ribosomal subunit protein eS17|Saccharolobus islandicus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|RS17E_SACI4|SMALL ribosomal subunit protein eS17|Saccharolobus islandicus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|RS17E_SACI3|SMALL ribosomal subunit protein eS17|Saccharolobus islandicus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|RS17E_SACI2|SMALL ribosomal subunit protein eS17|Saccharolobus islandicus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|RS17E_SACI1|SMALL ribosomal subunit protein eS17|Saccharolobus islandicus (strain

Query: 2 YTKQLKRMV 10
YTK +KR+V
Sbjct: 5 YTKDIKRIV 13


>sp|Y603_ARCFU|UNCHARACTERIZED protein AF_0603|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YTKQLKRMV 10
Y K+LKR+V
Sbjct: 8 YDKELKRIV 16


>sp|PURE_PYRHO|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RYTKQLKRMV 10
RY K +KR V
Sbjct: 150 RYMKDMKRKV 159




47|SequenceR|240|231|GAPEMRYTKQ

>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 APEMRYTK 9
APE+ YTK
Sbjct: 341 APEVLYTK 348


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAPEMRYTKQ 10
G PE+R TK
Sbjct: 176 GKPEIRKTKH 185


>sp|RL14_IGNH4|LARGE ribosomal subunit protein uL14|Ignicoccus hospitalis (strain

Query: 1 GAPEMRY 7
G PEMR+
Sbjct: 65 GTPEMRH 71


>sp|RNP1_PYRFU|RIBONUCLEASE P protein component 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAPEMRYTKQ 10
G PEMR K+
Sbjct: 115 GRPEMRLKKR 124


>sp|RNP1_PYRHO|RIBONUCLEASE P protein component 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GAPEMRYTKQ 10
G PEMR K+
Sbjct: 114 GRPEMRLKKR 123


>sp|RL14_METAR|LARGE ribosomal subunit protein uL14|Methanocella arvoryzae (strain DSM

Query: 1 GAPEMRYT 8
G PEMR T
Sbjct: 60 GTPEMRKT 67


>sp|RNP1_PYRAB|RIBONUCLEASE P protein component 1|Pyrococcus abyssi (strain GE5 /

Query: 1 GAPEMRYTKQ 10
G PEMR K+
Sbjct: 114 GRPEMRLKKR 123


>sp|RNP1_THESM|RIBONUCLEASE P protein component 1|Thermococcus sibiricus (strain DSM 12597

Query: 1 GAPEMRYTKQ 10
G PEMR K+
Sbjct: 113 GRPEMRLKKR 122


>sp|RNP1_THEKO|RIBONUCLEASE P protein component 1|Thermococcus kodakarensis (strain ATCC

Query: 1 GAPEMRYTKQ 10
G PEMR K+
Sbjct: 113 GRPEMRLKKR 122




48|SequenceR|245|236|WVGQSGAPEM

>sp|COFD_METBF|2-PHOSPHO-L-LACTATE transferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WVGQSGAPEM 10
W+G+ G PE+
Sbjct: 151 WIGKHGEPEV 160


>sp|COFD_METBU|2-PHOSPHO-L-LACTATE transferase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WVGQSGAPEM 10
WV Q G PE+
Sbjct: 151 WVKQHGVPEV 160


>sp|COFD_METAC|2-PHOSPHO-L-LACTATE transferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WVGQSGAPEM 10
WVG+ G P++
Sbjct: 151 WVGKHGDPDV 160


>sp|AGOG_METKA|N-GLYCOSYLASE/DNA lyase|Methanopyrus kandleri (strain AV19 /

Query: 1 WVGQSGAPEM 10
WVG S PE+
Sbjct: 213 WVGTSRDPEV 222


>sp|COFD_METMA|2-PHOSPHO-L-LACTATE transferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WVGQSGAPEM 10
W+G+ G P++
Sbjct: 151 WIGKRGEPDV 160


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WVGQSGAP 8
WVG++G P
Sbjct: 183 WVGRNGEP 190


>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 WVGQSGAPEM 10
W+ +SGA E+
Sbjct: 55 WIVESGAAEV 64


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 1 WVGQSGAPEM 10
W+G+ G P +
Sbjct: 265 WIGELGDPSI 274


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 WVGQSGAP 8
WVG SG P
Sbjct: 51 WVGWSGVP 58


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WVGQSGAPEM 10
+VG GAP M
Sbjct: 433 YVGPKGAPGM 442


>sp|TRM1_PYRAR|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum arsenaticum

Query: 1 WVGQSGAP 8
WVG G P
Sbjct: 263 WVGPMGDP 270


>sp|RL15E_METB6|LARGE ribosomal subunit protein eL15|Methanoregula boonei (strain DSM

Query: 1 WVGQSG 6
WVGQ G
Sbjct: 120 WVGQDG 125


>sp|RL15E_METLZ|LARGE ribosomal subunit protein eL15|Methanocorpusculum labreanum (strain

Query: 1 WVGQSG 6
WVGQ G
Sbjct: 120 WVGQDG 125


>sp|RL15E_METAR|LARGE ribosomal subunit protein eL15|Methanocella arvoryzae (strain DSM

Query: 1 WVGQSG 6
WVGQ G
Sbjct: 120 WVGQDG 125




49|SequenceR|250|241|FDDLGWVGQS

>sp|ARGB_METMA|ACETYLGLUTAMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DLGWVGQS 10
D+GWVG+S
Sbjct: 148 DIGWVGES 155


>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DLGWVGQS 10
D+GWVG+S
Sbjct: 148 DIGWVGES 155


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DLGWVGQS 10
DLGWVG +
Sbjct: 156 DLGWVGDT 163


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DLGWVGQ 9
D+GWVG+
Sbjct: 171 DIGWVGE 177


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 1 FDDLGWVGQ 9
FD+ GW G+
Sbjct: 230 FDEAGWKGR 238


>sp|ARGB_METAR|ACETYLGLUTAMATE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 DLGWVGQS 10
D GWVG +
Sbjct: 154 DYGWVGDT 161


>sp|RCE1_METMP|CAAX prenyl protease 2|Methanococcus maripaludis (strain DSM 14266

Query: 1 FDDLGWVG 8
F++LGW G
Sbjct: 139 FEELGWRG 146


>sp|RISC_AERPE|RIBOFLAVIN synthase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LGWVGQ 9
LGWVG+
Sbjct: 63 LGWVGR 68


>sp|ARLY_SACS2|ARGININOSUCCINATE lyase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DDLGWVG 8
+D GW+G
Sbjct: 86 EDAGWIG 92


>sp|SYS_METS5|SERINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 FDDLGWVGQS 10
F+D+ W+ Q+
Sbjct: 189 FEDVAWLEQA 198


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FDDLGWV 7
FDDL W+
Sbjct: 182 FDDLVWL 188


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FDDLGWV 7
FDDL W+
Sbjct: 184 FDDLVWL 190


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FDDLGWV 7
FDDL W+
Sbjct: 184 FDDLVWL 190


>sp|ARGB_ARCFU|ACETYLGLUTAMATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLGWVGQS 10
DLG+VG++
Sbjct: 145 DLGFVGET 152


>sp|ARGB_METTP|ACETYLGLUTAMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DLGWVGQ 9
DLG+VG+
Sbjct: 142 DLGYVGE 148


>sp|GGGPS_IGNH4|GERANYLGERANYLGLYCERYL phosphate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 GWVGQS 10
GWVG++
Sbjct: 137 GWVGEA 142


>sp|XYLF_SULAC|XYLOSE/ARABINOSE-BINDING protein XylF|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 LGWVGQS 10
LG++GQS
Sbjct: 192 LGYIGQS 198


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 DDLGWVG 8
+DL W+G
Sbjct: 158 EDLAWLG 164


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 DDLGWV 7
+DLGW+
Sbjct: 426 EDLGWL 431


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DDLGWVG 8
+DL W+G
Sbjct: 156 EDLSWLG 162


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 DDLGWVG 8
+DL W+G
Sbjct: 150 EDLNWLG 156


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 3 DLGWVG 8
DLGW G
Sbjct: 267 DLGWDG 272


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DDLGWVGQS 10
+DL W+G S
Sbjct: 163 EDLRWLGVS 171


>sp|THI4_NATPD|THIAMINE thiazole synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 DLGWVGQS 10
D WVGQS
Sbjct: 231 DSMWVGQS 238




50|SequenceR|255|246|FPLFQFDDLG

>sp|RECJ2_METJA|EXONUCLEASE RecJ2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLFQFDDLG 10
PLF F D+G
Sbjct: 79 PLFIFADMG 87


>sp|VORB_PYRHO|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus horikoshii (strain ATCC

Query: 1 FPLFQFDD 8
FPLF++++
Sbjct: 247 FPLFEYEN 254


>sp|VORB_PYRFU|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FPLFQFDD 8
FPLF++++
Sbjct: 247 FPLFEYEN 254


>sp|VORB_PYRAB|KETOISOVALERATE oxidoreductase subunit VorB|Pyrococcus abyssi (strain GE5 /

Query: 1 FPLFQFDD 8
FPLF++++
Sbjct: 247 FPLFEYEN 254


>sp|PUR7_METJA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FPLFQFD 7
FP+ QFD
Sbjct: 121 FPIVQFD 127


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 FPLFQFDDL 9
FP F+ DDL
Sbjct: 256 FPYFENDDL 264


>sp|NADA_HALSA|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LFQFDDL 9
LF++DDL
Sbjct: 12 LFKYDDL 18


>sp|NADA_HALS3|QUINOLINATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 LFQFDDL 9
LF++DDL
Sbjct: 12 LFKYDDL 18


>sp|RS3A_HALSA|SMALL ribosomal subunit protein eS1|Halobacterium salinarum (strain

Query: 4 FQFDDLG 10
FQ DD+G
Sbjct: 64 FQIDDVG 70


>sp|RS3A_HALS3|SMALL ribosomal subunit protein eS1|Halobacterium salinarum (strain

Query: 4 FQFDDLG 10
FQ DD+G
Sbjct: 64 FQIDDVG 70




51|SequenceR|260|251|SSGWIFPLFQ

>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SSGWIFPLFQ 10
SS W++P +Q
Sbjct: 363 SSDWLYPPYQ 372


>sp|METXA_METMS|HOMOSERINE O-acetyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 SSGWIFPLFQ 10
SS W++P +Q
Sbjct: 305 SSDWLYPSYQ 314


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GWIFPL 8
GWI+P+
Sbjct: 312 GWIYPI 317


>sp|METXA_METZD|HOMOSERINE O-acetyltransferase|Methanosalsum zhilinae (strain DSM 4017

Query: 1 SSGWIFPLFQ 10
+S W++P +Q
Sbjct: 313 TSDWLYPPYQ 322


>sp|METXA_METEZ|HOMOSERINE O-acetyltransferase|Methanohalobium evestigatum (strain ATCC

Query: 1 SSGWIFPLFQ 10
+S W++P +Q
Sbjct: 313 TSDWLYPPYQ 322


>sp|GLMM_METMA|PROBABLE phosphoglucosamine mutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSGWIFP 7
S WIFP
Sbjct: 311 SGSWIFP 317


>sp|GLMM_METBU|PROBABLE phosphoglucosamine mutase|Methanococcoides burtonii (strain DSM

Query: 1 SSGWIFP 7
S WIFP
Sbjct: 310 SGSWIFP 316


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SSGWIFP 7
S WIFP
Sbjct: 311 SGSWIFP 317


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 SSGWIFP 7
S WIFP
Sbjct: 311 SGSWIFP 317


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 SSGWIFPLFQ 10
+S W++P +Q
Sbjct: 313 TSDWLYPPYQ 322


>sp|TFE_METBU|TRANSCRIPTION factor E|Methanococcoides burtonii (strain DSM 6242

Query: 1 SSGWIFPLFQ 10
SSGW+ L+Q
Sbjct: 71 SSGWLTYLWQ 80


>sp|DCDB_NANEQ|DCTP deaminase, dUMP-forming|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 SSGWIFPLFQ 10
S+GWI P ++
Sbjct: 128 SAGWIDPGYE 137


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SSGWIFP 7
S WIFP
Sbjct: 307 SGTWIFP 313


>sp|RL30_KORCO|LARGE ribosomal subunit protein uL30|Korarchaeum cryptofilum (strain

Query: 3 GWIFPLFQ 10
GWI P F+
Sbjct: 118 GWIKPYFR 125


>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 SSGWIFPL 8
SSG++ PL
Sbjct: 89 SSGYVIPL 96


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GWIFP 7
GW++P
Sbjct: 319 GWVYP 323


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGWIFP 7
S WIFP
Sbjct: 86 SEWIFP 91


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SSGWIFPLF 9
SS W++P +
Sbjct: 311 SSDWLYPPY 319


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 4 WIFPLF 9
W++P+F
Sbjct: 122 WLYPVF 127




52|SequenceR|265|256|HDILQSSGWI

>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 HDILQSSGW 9
HDIL +GW
Sbjct: 77 HDILDRAGW 85


>sp|PELO_HYPBU|PROTEIN pelota homolog|Hyperthermus butylicus (strain DSM 5456

Query: 2 DILQSSGW 9
DI++ SGW
Sbjct: 108 DIVKPSGW 115


>sp|NADM_IGNH4|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DILQSSGWI 10
DIL +S W+
Sbjct: 77 DILMNSAWV 85


>sp|EF2_METPE|ELONGATION factor 2|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 DILQSSGW 9
DIL ++GW
Sbjct: 520 DILVANGW 527


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 DILQSSGW 9
D+L+ GW
Sbjct: 517 DLLKEQGW 524


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 4 LQSSGWI 10
+QSS WI
Sbjct: 8823 IQSSAWI 8829


>sp|FAU1_HALMA|PROBABLE ribonuclease FAU-1|Haloarcula marismortui (strain ATCC 43049

Query: 1 HDILQSSGWI 10
H+++Q+SG I
Sbjct: 22 HEVVQASGPI 31




53|SequenceR|270|261|PELYPHDILQ

>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 4 YPHDILQ 10
YPHD+L+
Sbjct: 187 YPHDLLE 193


>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PELYPHDI 8
P+L PHD+
Sbjct: 124 PDLDPHDV 131


>sp|RL10E_METMP|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 3 LYPHDILQ 10
+YPH+IL+
Sbjct: 88 VYPHEILR 95


>sp|RL10E_METM7|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 3 LYPHDILQ 10
+YPH+IL+
Sbjct: 88 VYPHEILR 95


>sp|RL10E_METM6|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 3 LYPHDILQ 10
+YPH+IL+
Sbjct: 88 VYPHEILR 95


>sp|RL10E_METM5|LARGE ribosomal subunit protein uL16|Methanococcus maripaludis (strain

Query: 3 LYPHDILQ 10
+YPH+IL+
Sbjct: 88 VYPHEILR 95


>sp|RIBB_METJA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 ELYPHDI 8
ELYP+DI
Sbjct: 87 ELYPNDI 93


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 1 PELYPHDI 8
P L+PHD+
Sbjct: 332 PPLHPHDV 339


>sp|CAS6L_PYRHO|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6nc|Pyrococcus

Query: 2 ELYPHDIL 9
+LYPHD L
Sbjct: 148 DLYPHDEL 155


>sp|AATB_THEPD|A-TYPE ATP synthase subunit B|Thermofilum pendens (strain DSM 2475

Query: 4 YPHDILQ 10
YPHD +Q
Sbjct: 124 YPHDFIQ 130


>sp|NQOR_METMA|NAD(P)H dehydrogenase (quinone)|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PELYPHDILQ 10
PE P D+L+
Sbjct: 40 PETLPEDVLE 49


>sp|RL10E_METMA|LARGE ribosomal subunit protein uL16|Methanosarcina mazei (strain ATCC

Query: 3 LYPHDILQ 10
+YPH++L+
Sbjct: 89 VYPHEVLR 96


>sp|RL10E_METBU|LARGE ribosomal subunit protein uL16|Methanococcoides burtonii (strain

Query: 3 LYPHDILQ 10
+YPH++L+
Sbjct: 88 VYPHEVLR 95


>sp|RL10E_METBF|LARGE ribosomal subunit protein uL16|Methanosarcina barkeri (strain

Query: 3 LYPHDILQ 10
+YPH++L+
Sbjct: 89 VYPHEVLR 96


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC

Query: 2 ELYPHDIL 9
E+YP DI+
Sbjct: 740 EIYPQDII 747


>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PELYPHDI 8
PELYP D+
Sbjct: 521 PELYPFDL 528


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 ELYPHDIL 9
E +PHDI+
Sbjct: 466 ESHPHDII 473


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ELYPHDIL 9
E +PHDI+
Sbjct: 466 ESHPHDII 473


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 2 ELYPHDIL 9
E +PHDI+
Sbjct: 466 ESHPHDII 473


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELYPHDIL 9
E +PHDI+
Sbjct: 477 ESHPHDII 484


>sp|GATD_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma acidophilum (strain ATCC

Query: 4 YPHDILQ 10
YPHD+ +
Sbjct: 378 YPHDLFR 384


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PELYP 5
PELYP
Sbjct: 22 PELYP 26


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 1 PELYP 5
PELYP
Sbjct: 43 PELYP 47


>sp|CAS6L_PYRFU|PUTATIVE CRISPR-associated endoribonuclease-like protein Cas6|Pyrococcus

Query: 2 ELYPHDIL 9
+LYPHD L
Sbjct: 148 DLYPHDEL 155


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 PELYP 5
PELYP
Sbjct: 22 PELYP 26


>sp|Y259_METJA|UNCHARACTERIZED protein MJ0259|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELYPHDIL 9
+ YPH+I+
Sbjct: 107 QFYPHNIV 114


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YPHDI 8
YPHD+
Sbjct: 414 YPHDV 418


>sp|MOAC_METKA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanopyrus kandleri

Query: 1 PELYPH 6
PEL PH
Sbjct: 68 PELVPH 73


>sp|RL10E_METAR|LARGE ribosomal subunit protein uL16|Methanocella arvoryzae (strain DSM

Query: 3 LYPHDILQ 10
+YPH +L+
Sbjct: 88 VYPHQVLR 95


>sp|RL10E_META3|LARGE ribosomal subunit protein uL16|Methanococcus aeolicus (strain

Query: 3 LYPHDILQ 10
+YPH +L+
Sbjct: 88 VYPHQVLR 95


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 1 PELYP 5
PELYP
Sbjct: 88 PELYP 92


>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 LYPHDILQ 10
+YP+D+L+
Sbjct: 146 VYPYDVLE 153


>sp|RL10E_METAC|LARGE ribosomal subunit protein uL16|Methanosarcina acetivorans (strain

Query: 3 LYPHDILQ 10
+YPH++++
Sbjct: 89 VYPHEVIR 96


>sp|NQOR_METBF|NAD(P)H dehydrogenase (quinone)|Methanosarcina barkeri (strain Fusaro /

Query: 1 PELYPHDILQ 10
PE P+++L+
Sbjct: 40 PETLPYEVLE 49


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 ELYPHDIL 9
EL+P DI+
Sbjct: 802 ELHPQDIM 809


>sp|PDAD_METAR|PYRUVOYL-DEPENDENT arginine decarboxylase|Methanocella arvoryzae (strain DSM 22066

Query: 1 PELYPHDIL 9
P LYP +I+
Sbjct: 61 PSLYPGEIV 69


>sp|Y290_METJA|UNCHARACTERIZED protein MJ0290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PELYPHDILQ 10
PE+Y D+L+
Sbjct: 96 PEVYQEDLLK 105


>sp|RL10E_METJA|LARGE ribosomal subunit protein uL16|Methanocaldococcus jannaschii

Query: 3 LYPHDILQ 10
+YPH IL+
Sbjct: 89 VYPHQILR 96


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 ELYPHDIL 9
ELYP D++
Sbjct: 901 ELYPQDVV 908


>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 ELYPHDIL 9
EL+P D++
Sbjct: 741 ELFPQDVI 748


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 1 PELYP 5
PELYP
Sbjct: 168 PELYP 172


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ELYPHDI 8
E+Y HDI
Sbjct: 117 EIYEHDI 123


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ELYPHDIL 9
E PHD+L
Sbjct: 467 ESQPHDVL 474


>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter thermautotrophicus

Query: 1 PELYP 5
PELYP
Sbjct: 169 PELYP 173


>sp|APGM_PICTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Picrophilus torridus (strain ATCC 700027

Query: 2 ELYPHDI 8
ELYP D+
Sbjct: 87 ELYPGDV 93


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PELYPHDI 8
PEL PH I
Sbjct: 124 PELNPHTI 131


>sp|FLPA_NANEQ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Nanoarchaeum equitans (strain

Query: 1 PELYPHDILQ 10
PE Y H ++Q
Sbjct: 135 PETYQHIVVQ 144


>sp|SYP_META3|PROLINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PELYPHDIL 9
PE+ PH I+
Sbjct: 275 PEVAPHQII 283


>sp|AATA_PYRAE|A-TYPE ATP synthase subunit A|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ELYPHDIL 9
E+YP D+L
Sbjct: 130 EVYPGDVL 137


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 YPHDILQ 10
YPH++++
Sbjct: 347 YPHEVIE 353




54|SequenceR|275|266|DVFHRPELYP

>sp|RL18_METTP|LARGE ribosomal subunit protein uL18|Methanothrix thermoacetophila

Query: 1 DVFHRPELYP 10
DV H PE++P
Sbjct: 129 DVPHSPEVFP 138


>sp|ARFB_METTM|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter marburgensis

Query: 5 RPELYP 10
RPELYP
Sbjct: 167 RPELYP 172


>sp|ILVD_IGNH4|DIHYDROXY-ACID dehydratase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DVFHRPELYP 10
DVF RPE P
Sbjct: 5 DVFLRPEYAP 14


>sp|METK_METST|S-ADENOSYLMETHIONINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DVFHRPELYP 10
DVF RP P
Sbjct: 148 DVFQRPNTIP 157


>sp|FLPA_SULTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfurisphaera tokodaii (strain

Query: 4 HRPELYP 10
HRP L+P
Sbjct: 123 HRPNLFP 129


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 2 VFHRPELY 9
+F RPEL+
Sbjct: 353 IFERPELW 360


>sp|CBIJ_METTH|COBALT-PRECORRIN-6A reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FHRPELYP 10
F RPE+ P
Sbjct: 137 FERPEVIP 144


>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVFHRPELY 9
D+ +RP+LY
Sbjct: 15 DITNRPQLY 23


>sp|PURT_HALWD|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Haloquadratum walsbyi

Query: 2 VFHRPELYP 10
+F +PE YP
Sbjct: 358 LFGKPEAYP 366


>sp|RL15_HYPBU|LARGE ribosomal subunit protein uL15|Hyperthermus butylicus (strain DSM

Query: 3 FHRPELY 9
F+RP++Y
Sbjct: 62 FNRPQIY 68


>sp|HEM1_AERPE|GLUTAMYL-TRNA reductase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VFHRPEL 8
VFH PE+
Sbjct: 280 VFHMPEV 286


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 1 DVFHRPELY 9
+VF+RP L+
Sbjct: 397 NVFNRPSLW 405


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 2 VFHRPELYP 10
+F +PE YP
Sbjct: 372 LFGKPEAYP 380


>sp|RS3_CENSY|SMALL ribosomal subunit protein uS3|Cenarchaeum symbiosum (strain A)

Query: 6 PELYP 10
PELYP
Sbjct: 88 PELYP 92


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 2 VFHRPELYP 10
+F +PE YP
Sbjct: 372 LFGKPEAYP 380


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 DVFHRPEL 8
+VF RPEL
Sbjct: 224 EVFTRPEL 231


>sp|PMDHS_METKA|PHOSPHOMEVALONATE dehydratase small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 VFHRPE 7
+FHRPE
Sbjct: 107 LFHRPE 112


>sp|FTSY_THEAC|SIGNAL recognition particle receptor FtsY|Thermoplasma acidophilum

Query: 1 DVFHRPELYP 10
++FHR ++ P
Sbjct: 11 EIFHRKKIDP 20


>sp|PHS_NATPD|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Natronomonas pharaonis

Query: 1 DVFHRPEL 8
+ FH PE+
Sbjct: 50 EAFHHPEM 57


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VFHRPELYP 10
++H P+L P
Sbjct: 516 IYHSPDLPP 524


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 DVFHRPELYP 10
+V H PE++P
Sbjct: 130 NVPHSPEIFP 139


>sp|EHAA_METTM|PROBABLE [NiFe]-hydrogenase-type-3 Eha complex

Query: 1 DVFHRPE 7
D+F RPE
Sbjct: 90 DIFPRPE 96


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 DVFHRPELYP 10
+V H PE++P
Sbjct: 130 NVPHSPEIFP 139


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 DVFHRPELYP 10
+V H PE++P
Sbjct: 130 NVPHSPEIFP 139




55|SequenceR|280|271|NVAKEDVFHR

>sp|PCNA2_SULAC|DNA polymerase sliding clamp 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 NVAKEDVFH 9
NV+KED+ +
Sbjct: 80 NVSKEDILY 88


>sp|Y1782_THEKO|UNCHARACTERIZED serpin-like protein TK1782|Thermococcus kodakarensis (strain ATCC

Query: 1 NVAKEDVFHR 10
N+A EDV H+
Sbjct: 353 NLAIEDVVHK 362




56|SequenceR|285|276|DKHNENVAKE

>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DKHNENVAKE 10
DK NE+++KE
Sbjct: 114 DKSNEHLSKE 123


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 DKHNENVA 8
D++NENVA
Sbjct: 665 DRNNENVA 672


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 DKHNENVAKE 10
DK NE+++KE
Sbjct: 114 DKSNEHLSKE 123


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 DKHNENVAKE 10
DK NE+++KE
Sbjct: 114 DKSNEHLSKE 123


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 DKHNENVAKE 10
DK NE+++KE
Sbjct: 114 DKSNEHLSKE 123


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DKHNENVAKE 10
DK NE+++KE
Sbjct: 114 DKSNEHLSKE 123


>sp|KHSE_HALMA|HOMOSERINE kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DKHNENVA 8
D H++NVA
Sbjct: 126 DAHDDNVA 133


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DKHNENVAK 9
D+ NE VAK
Sbjct: 718 DRDNERVAK 726


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DKHNENVAK 9
D+ NE VAK
Sbjct: 718 DRDNERVAK 726


>sp|PPSA_PYRHO|PROBABLE phosphoenolpyruvate synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 DKHNENVAK 9
D+ NE VAK
Sbjct: 721 DRDNERVAK 729




57|SequenceR|290|281|ELFMYDKHNE

>sp|ASPD_META3|L-ASPARTATE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 MYDKHNE 10
+YDKHN+
Sbjct: 32 LYDKHND 38


>sp|KPRS_THEKO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ELFMYDKHN 9
EL+++D HN
Sbjct: 115 ELYIFDTHN 123


>sp|KPRS_PYRHO|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ELFMYDKHN 9
EL+++D HN
Sbjct: 117 ELYVFDIHN 125


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ELFMYDKHN 9
EL+++D HN
Sbjct: 117 ELYVFDIHN 125


>sp|HYD2D_PYRFU|SULFHYDROGENASE 2 subunit delta|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LFMYDK 7
LF+YDK
Sbjct: 19 LFLYDK 24


>sp|CARB_PYRAE|CARBAMOYL phosphate synthase large chain|Pyrobaculum aerophilum (strain ATCC

Query: 2 LFMYDKHNE 10
++ YD H+E
Sbjct: 926 IYTYDPHHE 934


>sp|NADB_SULTO|L-ASPARTATE oxidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LFMYDKHNE 10
LF YDK E
Sbjct: 245 LFNYDKRGE 253


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELFMYDK 7
E FM+DK
Sbjct: 132 EFFMFDK 138




58|SequenceR|295|286|IFLICELFMY

>sp|FLAF_METVO|PUTATIVE flagella-related protein F|Methanococcus voltae

Query: 2 FLICELFMY 10
LIC +++Y
Sbjct: 16 LLICSVYLY 24


>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IFLICELFMY 10
+FLIC L +Y
Sbjct: 204 LFLICTLTLY 213


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 2 FLICELFMY 10
FLI ELF Y
Sbjct: 156 FLIYELFNY 164


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 2 FLICELFMY 10
FLI ELF Y
Sbjct: 163 FLIYELFNY 171


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 2 FLICELFMY 10
FLI ELF Y
Sbjct: 171 FLIYELFNY 179


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 2 FLICELFMY 10
FLI ELF Y
Sbjct: 168 FLIYELFNY 176


>sp|Y1010_METJA|UNCHARACTERIZED ATP-binding protein MJ1010|Methanocaldococcus jannaschii (strain

Query: 2 FLICELFMY 10
FLI ELF Y
Sbjct: 174 FLIYELFNY 182




59|SequenceR|300|291|TKMETIFLIC

>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain ATCC

Query: 4 ETIFLIC 10
ET++L+C
Sbjct: 164 ETVYLVC 170


>sp|ASNH1_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing]

Query: 4 ETIFLIC 10
ETI+L+C
Sbjct: 85 ETIWLVC 91


>sp|Y305_METJA|UNCHARACTERIZED protein MJ0305|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TKMETIF 7
TK+ETIF
Sbjct: 384 TKLETIF 390


>sp|RIFK_PYRAB|RIBOFLAVIN kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 KMETIFLI 9
KM+T+FL+
Sbjct: 2 KMKTLFLL 9




60|SequenceR|305|296|EAFPGTKMET

>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FPGTKMET 10
FPGT+++T
Sbjct: 326 FPGTRLKT 333


>sp|AMPPA_METTP|AMP phosphorylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PGTKMET 10
PGTK+ET
Sbjct: 283 PGTKLET 289


>sp|Y106_METJA|UNCHARACTERIZED protein MJ0106|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAFPGTKM 8
EAFPGT +
Sbjct: 22 EAFPGTGL 29


>sp|TMG10_PYRAB|TRNA (guanine(10)-N2)-dimethyltransferase|Pyrococcus abyssi (strain GE5

Query: 1 EAFPGTKME 9
EAFPG E
Sbjct: 241 EAFPGKTFE 249


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 EAFPGTKME 9
E++P TKME
Sbjct: 436 ESYPYTKME 444


>sp|RPO2N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 EAFPGTKMET 10
E PG MET
Sbjct: 506 EGIPGISMET 515


>sp|RPO2N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2N|Halobacterium salinarum (strain ATCC

Query: 1 EAFPGTKMET 10
E PG MET
Sbjct: 506 EGIPGISMET 515


>sp|COBQ_METJA|PROBABLE cobyric acid synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FPGTKMET 10
FPGT+ T
Sbjct: 294 FPGTRSST 301


>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EAFPGTKME 9
E +PG KM+
Sbjct: 181 EDYPGDKMD 189


>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 EAFPGTKME 9
+AFP T +E
Sbjct: 392 DAFPNTDLE 400




61|SequenceR|310|301|LQNSHEAFPG

>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 2 QNSHEAFP 9
QN+HE +P
Sbjct: 437 QNTHEEYP 444


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 QNSHEAFP 9
QN+HE +P
Sbjct: 445 QNTHEEYP 452


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 QNSHEAFP 9
QN+HE +P
Sbjct: 449 QNTHEEYP 456


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QNSHEAFP 9
QN+HE +P
Sbjct: 451 QNTHEEYP 458


>sp|THI4_METIK|THIAMINE thiazole synthase|Methanotorris igneus (strain DSM 5666

Query: 1 LQNSHEAFPG 10
L+N+ E +PG
Sbjct: 211 LRNTREVYPG 220


>sp|CDC62_METMA|ORC1-TYPE DNA replication protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LQNSHEAFPG 10
L +HE +PG
Sbjct: 160 LLRAHEQYPG 169


>sp|CDC62_METAC|ORC1-TYPE DNA replication protein 2|Methanosarcina acetivorans (strain ATCC

Query: 1 LQNSHEAFPG 10
L +HE +PG
Sbjct: 160 LLRAHEQYPG 169


>sp|DAPF_METJA|DIAMINOPIMELATE epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HEAFP 9
HEAFP
Sbjct: 202 HEAFP 206


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 QNSHEAFP 9
+N HE FP
Sbjct: 450 ENVHEEFP 457


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 1 LQNSHEAFP 9
L+ HE+FP
Sbjct: 698 LREVHESFP 706


>sp|SYFB_HALLT|PHENYLALANINE--TRNA ligase beta subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 QNSHEAFP 9
+N+H A+P
Sbjct: 460 RNTHNAYP 467




62|SequenceR|315|306|ASINWLQNSH

>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ASINWLQNS 9
A+INW+Q +
Sbjct: 755 AAINWMQET 763


>sp|CAS2_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas2|Pyrococcus furiosus (strain ATCC 43587

Query: 3 INWLQNS 9
+NW+QNS
Sbjct: 25 LNWVQNS 31


>sp|CAS2B_ARCFU|CRISPR-ASSOCIATED endoribonuclease Cas2 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 INWLQNS 9
+NW+QNS
Sbjct: 29 LNWVQNS 35


>sp|CAS2_METAC|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanosarcina acetivorans (strain ATCC

Query: 3 INWLQNS 9
+NW+QNS
Sbjct: 25 MNWVQNS 31


>sp|GGR_THEAC|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ASINWLQN 8
+SINW+ N
Sbjct: 226 SSINWIHN 233


>sp|CAS2_METJA|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanocaldococcus jannaschii (strain ATCC

Query: 3 INWLQNS 9
+NW+QNS
Sbjct: 52 LNWVQNS 58


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 SINWLQN 8
+INWLQ+
Sbjct: 425 AINWLQS 431


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 SINWLQN 8
+INWLQ+
Sbjct: 431 AINWLQS 437


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 SINWLQN 8
+INWLQ+
Sbjct: 429 AINWLQS 435


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 SINWLQN 8
+INWLQ+
Sbjct: 428 AINWLQS 434


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SINWLQN 8
+INWLQ+
Sbjct: 427 AINWLQS 433


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 2 SINWLQ 7
+INWLQ
Sbjct: 428 AINWLQ 433


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 4 NWLQNSH 10
+WL NSH
Sbjct: 113 DWLINSH 119


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ASINWLQNS 9
S+NWL+++
Sbjct: 286 GSVNWLRHT 294


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 3 INWLQNSH 10
IN+L NSH
Sbjct: 242 INFLWNSH 249


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SINWLQN 8
S NWL+N
Sbjct: 557 SYNWLKN 563


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 4 NWLQNS 9
NW++NS
Sbjct: 19 NWMKNS 24


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 ASINWLQNS 9
S+ W+QN+
Sbjct: 592 GSLTWMQNN 600


>sp|ARTA_HALVD|ARCHAEOSORTASE A|Haloferax volcanii (strain ATCC 29605

Query: 5 WLQNSH 10
W+Q SH
Sbjct: 158 WMQGSH 163


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 2 SINWLQN 8
SINWL +
Sbjct: 610 SINWLNS 616


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 SINWLQN 8
SINWL +
Sbjct: 598 SINWLNS 604


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SINWLQN 8
SINWL +
Sbjct: 427 SINWLNS 433


>sp|AATA_METAR|A-TYPE ATP synthase subunit A|Methanocella arvoryzae (strain DSM 22066

Query: 2 SINWLQN 8
SINWL +
Sbjct: 422 SINWLNS 428


>sp|CAS2_THEKO|CRISPR-ASSOCIATED endoribonuclease Cas2|Thermococcus kodakarensis (strain ATCC

Query: 3 INWLQNS 9
++W+QNS
Sbjct: 25 LHWVQNS 31


>sp|CAS2_METTH|CRISPR-ASSOCIATED endoribonuclease Cas2|Methanothermobacter thermautotrophicus

Query: 3 INWLQNS 9
++W+QNS
Sbjct: 29 LHWVQNS 35


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 2 SINWLQN 8
SINWL +
Sbjct: 421 SINWLDS 427


>sp|MPTN_METMP|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 SINWLQNSH 10
S NW+ N H
Sbjct: 206 SDNWITNIH 214


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 5 WLQNSH 10
W+ NSH
Sbjct: 5 WIPNSH 10




63|SequenceR|320|311|SWSPVASINW

>sp|HERA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 2 WSPVASINW 10
WS +AS+ W
Sbjct: 237 WSKIASVGW 245


>sp|Y1286_METJA|UNCHARACTERIZED protein MJ1286|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WSPVASI 8
W P+ASI
Sbjct: 284 WVPIASI 290


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 1 SWSPVASINW 10
+++PVA +W
Sbjct: 266 AYTPVAGTDW 275


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WSPVASINW 10
+SP+A I W
Sbjct: 439 YSPIAGIWW 447


>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 3 SPVASINW 10
SP+ +NW
Sbjct: 149 SPLKDLNW 156




64|SequenceR|325|316|GQNVKSWSPV

>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 GQNVKSWSPV 10
GQ W+PV
Sbjct: 696 GQEFSRWAPV 705


>sp|EF2_DESMO|ELONGATION factor 2|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 1 GQNVKSWSPV 10
GQ W+PV
Sbjct: 694 GQEFSRWAPV 703


>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 1 GQNVKSWSPV 10
GQ W+PV
Sbjct: 696 GQEFSRWAPV 705


>sp|Y1292_METJA|UNCHARACTERIZED protein MJ1292|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GQNVKSWSP 9
G +KSW+P
Sbjct: 196 GLIIKSWTP 204


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 GQNVKSWSPV 10
G+ SWSPV
Sbjct: 25 GRYDPSWSPV 34


>sp|MTD_METB6|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoregula

Query: 3 NVKSWSP 9
N+K+W P
Sbjct: 54 NMKAWKP 60


>sp|Y1082_METJA|UNCHARACTERIZED protein MJ1082|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QNVKSW 7
QNVK W
Sbjct: 106 QNVKKW 111


>sp|MTD_METMJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanoculleus

Query: 3 NVKSWSP 9
N+K+W P
Sbjct: 54 NMKAWGP 60


>sp|MTD_METHJ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanospirillum

Query: 3 NVKSWSP 9
N+K+W P
Sbjct: 54 NMKAWGP 60


>sp|HCGE_METTM|GUANYLYLPYRIDINOL adenylase HcgE|Methanothermobacter marburgensis (strain ATCC

Query: 1 GQNVKSWSPV 10
G+ ++ W PV
Sbjct: 178 GKLIRDWEPV 187


>sp|MTD_METLZ|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocorpusculum

Query: 3 NVKSWSP 9
N+K+W P
Sbjct: 54 NLKAWQP 60


>sp|MOAA_AERPE|PROBABLE GTP 3',8-cyclase|Aeropyrum pernix (strain ATCC 700893

Query: 6 SWSPV 10
SWSPV
Sbjct: 43 SWSPV 47


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 1 GQNVKSW 7
G+N+ SW
Sbjct: 270 GENLSSW 276


>sp|Y106A_PYRHO|PUTATIVE antitoxin PH1062.1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GQNVKSWSPV 10
G+ + SW+PV
Sbjct: 66 GKWLNSWTPV 75


>sp|Y1401_PYRAB|PUTATIVE phosphate permease PYRAB14010|Pyrococcus abyssi (strain GE5 /

Query: 2 QNVKSWSPV 10
++ K WSPV
Sbjct: 173 RSAKRWSPV 181


>sp|CCA_PYRHO|CCA-ADDING enzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NVKSWSPV 10
NVK+W V
Sbjct: 125 NVKNWKDV 132




65|SequenceR|330|321|YMRILGQNVK

>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YMRILGQNV 9
Y R+LG+NV
Sbjct: 65 YHRMLGENV 73


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 2 MRILGQNV 9
MRILG N+
Sbjct: 128 MRILGPNI 135


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 YMRILGQNV 9
Y R++G+NV
Sbjct: 63 YQRMIGKNV 71


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YMRILGQNV 9
YMR+ G NV
Sbjct: 61 YMRMKGYNV 69


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YMRILGQNV 9
YMR+ G NV
Sbjct: 58 YMRMRGYNV 66


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 YMRILGQNVK 10
++ ILG+N K
Sbjct: 286 FIHILGENAK 295


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 YMRILGQNV 9
Y R++G NV
Sbjct: 64 YKRMMGNNV 72


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YMRILGQNV 9
YMR+ G NV
Sbjct: 59 YMRMKGYNV 67


>sp|SYD_THEVO|ASPARTATE--TRNA(ASP) ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 MRILGQNVK 10
+RI+G+N K
Sbjct: 305 LRIIGRNFK 313


>sp|SYC_METS5|CYSTEINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 YMRILGQNV 9
Y+R+ G NV
Sbjct: 52 YLRVKGYNV 60


>sp|SYI_SACS2|ISOLEUCINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YMRILGQNV 9
Y R+LG+ V
Sbjct: 9 YQRVLGKRV 17




66|SequenceR|335|326|LCEAKYMRIL

>sp|DP2L_THEAC|DNA polymerase II large subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 CEAKYMRI 9
C AKY RI
Sbjct: 1000 CNAKYRRI 1007


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CEAKYMRI 9
C AKY RI
Sbjct: 1005 CNAKYRRI 1012


>sp|Y513_METJA|UNCHARACTERIZED protein MJ0513|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LCEAKYMR 8
LC AKY++
Sbjct: 87 LCRAKYLK 94


>sp|RNP2_NATPD|RIBONUCLEASE P protein component 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 CEAKYMR 8
CE KY+R
Sbjct: 109 CEEKYIR 115


>sp|RNP2_HALMA|RIBONUCLEASE P protein component 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 CEAKYMR 8
CE KY+R
Sbjct: 109 CEEKYIR 115


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 2 CEAKYMRI 9
C AKY RI
Sbjct: 1040 CGAKYRRI 1047


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 CEAKYMRI 9
C AKY RI
Sbjct: 1052 CGAKYRRI 1059


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 2 CEAKYMRI 9
C AKY RI
Sbjct: 1058 CGAKYRRI 1065


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 CEAKYMRI 9
C AKY R+
Sbjct: 1207 CNAKYRRM 1214


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 CEAKYMRI 9
C AKY R+
Sbjct: 998 CNAKYRRV 1005




67|SequenceR|340|331|VPFKELCEAK

>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPFKELCEA 9
VPF +CEA
Sbjct: 193 VPFNPICEA 201


>sp|MFNA_METAR|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanocella arvoryzae

Query: 3 FKELCEAK 10
F ELCEA+
Sbjct: 12 FAELCEAR 19


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 3 FKELCE 8
+KELCE
Sbjct: 325 YKELCE 330


>sp|TF2B_METKA|TRANSCRIPTION initiation factor IIB|Methanopyrus kandleri (strain AV19 /

Query: 3 FKELCEA 9
+KE+CEA
Sbjct: 294 YKEICEA 300


>sp|Y1216_METJA|PUTATIVE RNase MJ1216|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPFKELC 7
+PFKEL
Sbjct: 67 IPFKELA 73


>sp|Y125_METJA|PUTATIVE RNase MJ0125|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPFKELC 7
+PFKEL
Sbjct: 67 IPFKELA 73


>sp|Y088_METJA|UNCHARACTERIZED protein MJ0088|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FKELCE 8
+KELCE
Sbjct: 100 YKELCE 105




68|SequenceR|345|336|KFHQIVPFKE

>sp|COFC_METMJ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FHQIVPFK 9
FH ++PFK
Sbjct: 3 FHALIPFK 10


>sp|COFC_METLZ|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 2 FHQIVPFK 9
FH ++PFK
Sbjct: 3 FHALIPFK 10


>sp|HIS7_SACI7|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 HQIVPFKE 10
HQI+P E
Sbjct: 94 HQIIPMDE 101


>sp|HIS7_SACI3|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 HQIVPFKE 10
HQI+P E
Sbjct: 94 HQIIPMDE 101


>sp|HIS7_SACI2|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 HQIVPFKE 10
HQI+P E
Sbjct: 94 HQIIPMDE 101


>sp|HIS7_SACI1|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 HQIVPFKE 10
HQI+P E
Sbjct: 94 HQIIPMDE 101


>sp|HIS7_SACI6|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 HQIVPFKE 10
HQI+P E
Sbjct: 94 HQIIPMDE 101


>sp|HIS7_SACI4|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 HQIVPFKE 10
HQI+P E
Sbjct: 94 HQIIPMDE 101


>sp|SYA_SULTO|ALANINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KFHQIVPFKE 10
K HQ VP K+
Sbjct: 476 KRHQTVPLKD 485


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 KFHQIVPFKE 10
+ H+I PF +
Sbjct: 209 RIHEIAPFAD 218


>sp|COBQ_METBU|PROBABLE cobyric acid synthase|Methanococcoides burtonii (strain DSM 6242

Query: 3 HQIVPFK 9
H++ PFK
Sbjct: 37 HKVAPFK 43


>sp|SYFB_METPE|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaerula palustris (strain ATCC

Query: 2 FHQIVPF 8
+H+++PF
Sbjct: 372 YHEVMPF 378


>sp|COFC_METTP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 3 HQIVPFK 9
H +VPFK
Sbjct: 6 HCVVPFK 12


>sp|Y804_METJA|UNCHARACTERIZED protein MJ0804|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HQIVPFKE 10
HQ++ +KE
Sbjct: 201 HQLISYKE 208


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 2 FHQIVPFKE 10
+HQ + FKE
Sbjct: 229 YHQALAFKE 237


>sp|FTTA_METTH|TRANSCRIPTION termination factor FttA|Methanothermobacter thermautotrophicus

Query: 1 KFHQIVP 7
K H+IVP
Sbjct: 79 KIHEIVP 85


>sp|RL22_META3|LARGE ribosomal subunit protein uL22|Methanococcus aeolicus (strain

Query: 2 FHQIVPFK 9
Q+VPFK
Sbjct: 55 LKQVVPFK 62


>sp|ATGT_THEON|TRNA-GUANINE(15) transglycosylase|Thermococcus onnurineus (strain NA1)

Query: 1 KFHQIVPF 8
+ H+I+PF
Sbjct: 495 RLHEILPF 502




69|SequenceR|350|341|LLSGFKFHQI

>sp|METE_SULAC|METHIONINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LSGFKFH 8
LSGFKF+
Sbjct: 80 LSGFKFY 86


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 LLSGFKFH 8
L GFKFH
Sbjct: 331 LTPGFKFH 338


>sp|Y2337_ARCFU|UNCHARACTERIZED protein AF_2337|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLSGFKFHQI 10
+LSGF+F+++
Sbjct: 95 MLSGFEFNEM 104


>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 4 GFKFHQI 10
GF+FH++
Sbjct: 65 GFRFHRV 71


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LSGFKFHQI 10
L+GF FH +
Sbjct: 491 LTGFIFHDV 499


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 LLSGFKFHQ 9
+LSG ++HQ
Sbjct: 555 VLSGVEYHQ 563


>sp|GCST_HALMA|PROBABLE aminomethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLSGFKFHQI 10
LLSG +FH +
Sbjct: 237 LLSGQEFHPV 246


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LLSGFKF 7
++SGFKF
Sbjct: 166 MISGFKF 172


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 1 LLSGFKFHQ 9
LLSG FH
Sbjct: 293 LLSGVAFHH 301


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LSGFKFH 8
+SGFKF+
Sbjct: 78 ISGFKFY 84


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 SGFKFHQ 9
SGFK H+
Sbjct: 214 SGFKIHE 220


>sp|METE_SULTO|METHIONINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LSGFKFH 8
L+GFKF+
Sbjct: 79 LAGFKFY 85


>sp|TRPA_METVO|TRYPTOPHAN synthase alpha chain|Methanococcus voltae

Query: 1 LLSGFKFHQ 9
L +G+K HQ
Sbjct: 78 LSNGYKIHQ 86


>sp|Y611_METJA|PUTATIVE zinc metalloprotease MJ0611|Methanocaldococcus jannaschii (strain

Query: 3 SGFKFHQI 10
SGF FH++
Sbjct: 44 SGFIFHEL 51




70|SequenceR|358|346|GSTVPHIPLLSGF

>sp|G1PDH_METST|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosphaera stadtmanae (strain ATCC

Query: 1 GSTVPHIPLLS 11
ST+ HIPL+S
Sbjct: 103 ASTINHIPLIS 113


>sp|Y1509_METJA|UNCHARACTERIZED protein MJ1509|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 HIPLLSGF 13
HIPL GF
Sbjct: 62 HIPLTKGF 69


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 VPHIPLLS 11
+PH+PL++
Sbjct: 187 IPHLPLIA 194


>sp|AROB_PYRAB|3-DEHYDROQUINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 STVPHIPLLSG 12
ST+P I LL+G
Sbjct: 154 STLPRIELLNG 164


>sp|COBQ_HALSA|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 VPHIPLLSGF 13
VPH+P +S F
Sbjct: 280 VPHLPHISNF 289


>sp|COBQ_HALS3|PROBABLE cobyric acid synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 VPHIPLLSGF 13
VPH+P +S F
Sbjct: 280 VPHLPHISNF 289


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 PHIPLLSG 12
P +PLL+G
Sbjct: 200 PEVPLLTG 207


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 5 PHIPLLSG 12
P IPLL+G
Sbjct: 210 PTIPLLTG 217


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter

Query: 2 STVPHIPL 9
ST P IPL
Sbjct: 30 STTPEIPL 37


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 5 PHIPLLSG 12
P IPLL+G
Sbjct: 205 PSIPLLTG 212


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 6 HIPLLSG 12
H PLLSG
Sbjct: 180 HAPLLSG 186


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PHIPLLSG 12
P IPL++G
Sbjct: 207 PEIPLITG 214


>sp|RL4_META3|LARGE ribosomal subunit protein uL4|Methanococcus aeolicus (strain ATCC

Query: 3 TVPHIPLL 10
TVP +PL+
Sbjct: 134 TVPSVPLI 141


>sp|AATD_AERPE|A-TYPE ATP synthase subunit D|Aeropyrum pernix (strain ATCC 700893

Query: 3 TVPHIPLLSG 12
TVP +PL +G
Sbjct: 114 TVPPLPLPAG 123


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 HIPLLSG 12
H PLLSG
Sbjct: 174 HAPLLSG 180


>sp|Y1800_ARCFU|PUTATIVE transport protein AF_1800|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VPHIPLLSG 12
VP PLLSG
Sbjct: 217 VPFAPLLSG 225


>sp|NOP10_IGNH4|RIBOSOME biogenesis protein Nop10|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 STVPHIPLLS 11
+TVPH P S
Sbjct: 27 TTVPHPPRFS 36


>sp|METXA_METLZ|HOMOSERINE O-acetyltransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GSTVPHIPLLSG 12
G + H+P++SG
Sbjct: 395 GHEINHLPVVSG 406


>sp|ADEC_METTH|ADENINE deaminase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 HIPLLSG 12
H PLLSG
Sbjct: 173 HAPLLSG 179


>sp|RNZ_HALSA|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 700922

Query: 1 GSTVPHIPLLSG 12
G T PH P++S
Sbjct: 209 GDTRPHDPVVSA 220


>sp|RNZ_HALS3|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 29341

Query: 1 GSTVPHIPLLSG 12
G T PH P++S
Sbjct: 209 GDTRPHDPVVSA 220


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GSTVPHIPLL 10
G T HIP++
Sbjct: 109 GPTYQHIPII 118


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 7 IPLLSGF 13
IPLL+GF
Sbjct: 568 IPLLTGF 574


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 1 GSTVPHIPLLSG 12
G V H+P+ G
Sbjct: 151 GINVTHVPIAHG 162




THE END