PRKRA_HUMAN Blast Output
Archaea
1|Sequence|1|10|MSQSRHRAEA

***** No hits found ******


2|Sequence|6|15|HRAEAPPLER

>sp|MTBC3_METAC|DIMETHYLAMINE corrinoid protein 3|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RAEAPPLE 9
RAE PP E
Sbjct: 31 RAEVPPEE 38


>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 3 AEAPPL 8
AEAPPL
Sbjct: 283 AEAPPL 288




3|Sequence|11|20|PPLEREDSGT

>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 PLERED 7
PLERED
Sbjct: 878 PLERED 883


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PPLEREDSGT 10
PPL ED+ T
Sbjct: 239 PPLSEEDATT 248




4|Sequence|16|25|EDSGTFSLGK

>sp|MRAY_METTH|PUTATIVE phospho-N-acetylmuramoyl-pentapeptide-

Query: 2 DSGTFSLG 9
D+G+F+LG
Sbjct: 262 DTGSFALG 269


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 EDSGTFSL 8
E+ GTFSL
Sbjct: 278 EEDGTFSL 285


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 EDSGTFSL 8
ED+G FSL
Sbjct: 172 EDAGVFSL 179


>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 EDSGTFSL 8
ED+G FSL
Sbjct: 172 EDAGVFSL 179


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 1 EDSGTFSL 8
ED+G FSL
Sbjct: 172 EDAGVFSL 179


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EDSGTFSL 8
ED+G FSL
Sbjct: 172 EDAGVFSL 179


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EDSGTFSL 8
ED+G FSL
Sbjct: 172 EDAGVFSL 179


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 1 EDSGTFSL 8
ED+G FSL
Sbjct: 172 EDAGVFSL 179


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 EDSGTFSL 8
ED+G FS+
Sbjct: 172 EDAGVFSI 179


>sp|RL37_PYRHO|LARGE ribosomal subunit protein eL37|Pyrococcus horikoshii (strain ATCC

Query: 3 SGTFSLGK 10
SGT SLGK
Sbjct: 3 SGTPSLGK 10


>sp|RL37_PYRAB|LARGE ribosomal subunit protein eL37|Pyrococcus abyssi (strain GE5 /

Query: 3 SGTFSLGK 10
SGT SLGK
Sbjct: 3 SGTPSLGK 10


>sp|Y3024_HALLT|UNCHARACTERIZED protein Hlac_3024|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 TFSLGK 10
TFSLGK
Sbjct: 246 TFSLGK 251




5|Sequence|21|30|FSLGKMITAK

>sp|Y731_ARCFU|PUTATIVE ABC transporter ATP-binding protein|Archaeoglobus fulgidus (strain

Query: 1 FSLGKMITAK 10
FSLGK+I A+
Sbjct: 234 FSLGKVILAE 243




6|Sequence|26|35|MITAKPGKTP

>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MITAKPGKTP 10
+IT PGK P
Sbjct: 102 LITIHPGKRP 111


>sp|DNAG_METBF|DNA primase DnaG|Methanosarcina barkeri (strain Fusaro /

Query: 1 MITAKPGKT 9
M+TAK GKT
Sbjct: 59 MVTAKGGKT 67


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain

Query: 1 MITAKPGK 8
MIT KPGK
Sbjct: 4 MITIKPGK 11


>sp|DNAG_METAC|DNA primase DnaG|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MITAKPGKT 9
M+TAK GKT
Sbjct: 59 MVTAKGGKT 67


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 MITAKPGK 8
MIT KPGK
Sbjct: 4 MITIKPGK 11


>sp|MPTA_METMJ|GTP cyclohydrolase MptA|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 AKPGKTP 10
A+PGK P
Sbjct: 32 ARPGKRP 38


>sp|IF5A_HALSA|TRANSLATION initiation factor 5A|Halobacterium salinarum (strain ATCC 700922

Query: 3 TAKPGK 8
TAKPGK
Sbjct: 31 TAKPGK 36


>sp|IF5A_HALS3|TRANSLATION initiation factor 5A|Halobacterium salinarum (strain ATCC 29341

Query: 3 TAKPGK 8
TAKPGK
Sbjct: 31 TAKPGK 36


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 2 ITAKPGKTP 10
I KPGK P
Sbjct: 431 IVKKPGKKP 439


>sp|DNAG_METMA|DNA primase DnaG|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MITAKPGKT 9
M+TAK GKT
Sbjct: 59 MVTAKGGKT 67


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 MITAKPGKT 9
++ KPGKT
Sbjct: 462 IVCGKPGKT 470


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 6 PGKTP 10
PGKTP
Sbjct: 140 PGKTP 144


>sp|IF5A_HALWD|TRANSLATION initiation factor 5A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TAKPGK 8
TAKPGK
Sbjct: 31 TAKPGK 36


>sp|IF5A_HALMA|TRANSLATION initiation factor 5A|Haloarcula marismortui (strain ATCC 43049

Query: 3 TAKPGK 8
TAKPGK
Sbjct: 31 TAKPGK 36


>sp|IF5A_HALLT|TRANSLATION initiation factor 5A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 TAKPGK 8
TAKPGK
Sbjct: 31 TAKPGK 36


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 4 AKPGKTP 10
A PGKTP
Sbjct: 376 AVPGKTP 382


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 4 AKPGKTP 10
A PGKTP
Sbjct: 376 AVPGKTP 382


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 4 AKPGKTP 10
A PGKTP
Sbjct: 376 AVPGKTP 382


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 4 AKPGKTP 10
A PGKTP
Sbjct: 376 AVPGKTP 382


>sp|IMDH_NITMS|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 MITAKPG 7
++TAKPG
Sbjct: 155 VVTAKPG 161


>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ITAKPGKTP 10
+ KPGK P
Sbjct: 312 VVGKPGKLP 320


>sp|IF2G_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 ITAKPGKTP 10
+ KPGK P
Sbjct: 312 VVGKPGKLP 320




7|Sequence|31|40|PGKTPIQVLH

>sp|Y3675_HALWD|UPF0213 protein HQ_3675A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GKTPIQVLH 10
G+TP+Q++H
Sbjct: 43 GRTPVQLVH 51


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 KTPIQVLH 10
KTP+Q++H
Sbjct: 357 KTPLQIIH 364


>sp|HIS6_METMJ|IMIDAZOLE glycerol phosphate synthase subunit|Methanoculleus marisnigri

Query: 1 PGKTPIQV 8
PGKTPI +
Sbjct: 140 PGKTPITL 147


>sp|Y776_NATPD|UPF0213 protein NP_0776A|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GKTPIQVLH 10
G+TP++++H
Sbjct: 43 GRTPVELVH 51


>sp|RS7_PYRFU|SMALL ribosomal subunit protein uS7|Pyrococcus furiosus (strain ATCC

Query: 2 GKTPIQVL 9
GK PIQVL
Sbjct: 116 GKNPIQVL 123


>sp|RS7_PYRAB|SMALL ribosomal subunit protein uS7|Pyrococcus abyssi (strain GE5 /

Query: 2 GKTPIQVL 9
GK PIQVL
Sbjct: 116 GKNPIQVL 123


>sp|RS7_PYRHO|SMALL ribosomal subunit protein uS7|Pyrococcus horikoshii (strain ATCC

Query: 2 GKTPIQVL 9
GK PIQVL
Sbjct: 119 GKNPIQVL 126


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 1 PGKTPIQVL 9
PG TP++V+
Sbjct: 285 PGMTPLEVM 293


>sp|APGM2_METTH|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 2|Methanothermobacter thermautotrophicus

Query: 2 GKTPIQV 8
GKTP+QV
Sbjct: 24 GKTPLQV 30


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PGKTPIQVL 9
PG TP++V+
Sbjct: 285 PGMTPLEVM 293


>sp|RS7_KORCO|SMALL ribosomal subunit protein uS7|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GKTPIQVL 9
GK PIQV
Sbjct: 108 GKNPIQVF 115


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 2 GKTPIQVLH 10
GKTP Q +H
Sbjct: 287 GKTPYQQIH 295


>sp|MTAD_THESM|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GKTPIQVL 9
GKTP+++L
Sbjct: 224 GKTPVELL 231


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 1 PGKTPIQVL 9
PGKTP L
Sbjct: 378 PGKTPASTL 386


>sp|VHCA_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit A|Archaeoglobus profundus (strain

Query: 1 PGKTPIQVL 9
PG+ P++VL
Sbjct: 463 PGRYPLEVL 471


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 1 PGKTPIQVL 9
PGKTP L
Sbjct: 378 PGKTPASTL 386


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 1 PGKTPIQVL 9
PGKTP L
Sbjct: 378 PGKTPASTL 386


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 1 PGKTPIQVL 9
PGKTP L
Sbjct: 378 PGKTPASTL 386


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PGKTPIQVL 9
PG TP++V+
Sbjct: 285 PGMTPLEVM 293


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 3 KTPIQVLH 10
KTP +VLH
Sbjct: 369 KTPKRVLH 376


>sp|HEM1_PYRIL|GLUTAMYL-TRNA reductase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 TPIQVLH 10
TPI VLH
Sbjct: 40 TPIYVLH 46


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 3 KTPIQVLH 10
+TP +VLH
Sbjct: 363 RTPTRVLH 370


>sp|RS7_SULAC|SMALL ribosomal subunit protein uS7|Sulfolobus acidocaldarius (strain

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 96 GQNPIQVL 103


>sp|HEM12_PYRAR|GLUTAMYL-TRNA reductase 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 KTPIQVLH 10
KTP+ VLH
Sbjct: 39 KTPMFVLH 46


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 GKTPIQV 8
GKTP++V
Sbjct: 88 GKTPLEV 94


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 GKTPIQV 8
GKTP++V
Sbjct: 88 GKTPLEV 94


>sp|SYP_METM7|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 GKTPIQV 8
GKTP++V
Sbjct: 88 GKTPLEV 94


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 PGKTPIQ 7
PG+TP++
Sbjct: 188 PGETPVK 194


>sp|RS7_SACS2|SMALL ribosomal subunit protein uS7|Saccharolobus solfataricus (strain

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 94 GQNPIQVL 101


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GKTPIQV 8
GKTP++V
Sbjct: 88 GKTPLEV 94


>sp|RS7_AERPE|SMALL ribosomal subunit protein uS7|Aeropyrum pernix (strain ATCC 700893

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 106 GENPIQVL 113


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PGKTPIQVL 9
PGKTP +
Sbjct: 378 PGKTPASTI 386


>sp|RS7_METKA|SMALL ribosomal subunit protein uS7|Methanopyrus kandleri (strain AV19 /

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 98 GENPIQVL 105


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GKTPIQV 8
GKTPI +
Sbjct: 229 GKTPISI 235


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PGKTPIQVL 9
PG TP +V+
Sbjct: 284 PGMTPTEVM 292


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 PGKTPI 6
PG+TPI
Sbjct: 306 PGETPI 311


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 1 PGKTPIQVL 9
PG TP++ +
Sbjct: 374 PGDTPVETI 382


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 1 PGKTP 5
PGKTP
Sbjct: 378 PGKTP 382


>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 95 GQNPIQVL 102


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 125 GQNPIQVL 132


>sp|GUAAA_THEAC|GMP synthase [glutamine-hydrolyzing] subunit A|Thermoplasma acidophilum

Query: 2 GKTPIQVLH 10
GKT + V+H
Sbjct: 103 GKTKVSVMH 111


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 2 GKTPIQVL 9
GKT +QVL
Sbjct: 330 GKTKVQVL 337


>sp|RS7_DESMO|SMALL ribosomal subunit protein uS7|Desulfurococcus mucosus

Query: 2 GKTPIQVL 9
G+ PIQVL
Sbjct: 99 GENPIQVL 106


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 2 GKTPIQVL 9
GK P+QV
Sbjct: 125 GKNPVQVF 132


>sp|APGM_METKA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanopyrus kandleri (strain AV19 /

Query: 2 GKTPIQ 7
GKTP+Q
Sbjct: 28 GKTPLQ 33


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 2 GKTPIQV 8
G+TP+QV
Sbjct: 21 GRTPLQV 27




8|Sequence|36|45|IQVLHEYGMK

>sp|ACDA2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 IQVLHEYGMK 10
+++ H+YGM+
Sbjct: 114 VEIAHKYGMR 123


>sp|SYH_THEVO|HISTIDINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IQVLHEYGMK 10
I +L EYG+K
Sbjct: 245 IDILKEYGVK 254


>sp|MFNB_METVS|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 IQVLHEYGMK 10
++ H+YGMK
Sbjct: 173 VEETHKYGMK 182


>sp|MFNB_METMP|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 IQVLHEYGMK 10
++ H+YGMK
Sbjct: 173 VEETHKYGMK 182


>sp|MFNB_METM7|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 IQVLHEYGMK 10
++ H+YGMK
Sbjct: 173 VEETHKYGMK 182


>sp|MFNB_METM6|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C6 /

Query: 1 IQVLHEYGMK 10
++ H+YGMK
Sbjct: 173 VEETHKYGMK 182


>sp|MFNB_METM5|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus maripaludis (strain C5 /

Query: 1 IQVLHEYGMK 10
++ H+YGMK
Sbjct: 173 VEETHKYGMK 182


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IQVLHEYGMK 10
IQV EYG +
Sbjct: 1157 IQVAEEYGCR 1166


>sp|RS15_METTP|SMALL ribosomal subunit protein uS15|Methanothrix thermoacetophila

Query: 1 IQVLHEYGM 9
I LHE GM
Sbjct: 37 IMTLHERGM 45


>sp|TRPC_METKA|INDOLE-3-GLYCEROL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 IQVLHEYGMK 10
I + HE+GM+
Sbjct: 142 IDLAHEHGME 151


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IQVLHEYGM 9
+QV ++YGM
Sbjct: 198 VQVSNDYGM 206


>sp|TPIS_METFV|TRIOSEPHOSPHATE isomerase|Methanothermus fervidus (strain ATCC 43054

Query: 2 QVLHEYGMK 10
QV EYG+K
Sbjct: 30 QVSEEYGVK 38


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IQVLHEYGM 9
+QV+HE G+
Sbjct: 459 VQVVHEAGI 467


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 IQVLHEYGM 9
+QV ++YGM
Sbjct: 223 LQVSNDYGM 231


>sp|DNLI2_HALWD|DNA ligase 2|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IQVLHEYGM 9
+QV ++YGM
Sbjct: 257 LQVSNDYGM 265


>sp|GFPS_NATPD|GERANYLFARNESYL diphosphate synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IQVLHEYGM 9
++ LH YG+
Sbjct: 216 VEALHGYGL 224


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 IQVLHEYG 8
I +HEYG
Sbjct: 221 IGTIHEYG 228


>sp|NEP1_PYRIL|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum islandicum (strain

Query: 3 VLHEYGMK 10
VLHE G+K
Sbjct: 149 VLHESGVK 156


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 1 IQVLHEYG 8
+ ++HEYG
Sbjct: 77 VSMIHEYG 84




9|Sequence|41|50|EYGMKTKNIP

>sp|Y331_METJA|UNCHARACTERIZED protein MJ0331|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EYGMKTKNIP 10
E+G K KNIP
Sbjct: 98 EFGSKKKNIP 107


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 326 EYGLKPMNCP 335


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 326 EYGLKPMNCP 335


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 326 EYGLKPMNCP 335


>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 326 EYGLKPMNCP 335


>sp|SYT_HALWD|THREONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 326 EYGLKPMNCP 335


>sp|IF2P_SULTO|PROBABLE translation initiation factor IF-2|Sulfurisphaera tokodaii (strain

Query: 3 GMKTKNIP 10
G+K KNIP
Sbjct: 379 GLKQKNIP 386


>sp|MCRC_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 2 YGMKTKNI 9
YGM+ +NI
Sbjct: 59 YGMRKENI 66


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 2 YGMKTKNIP 10
YGM K IP
Sbjct: 95 YGMDYKKIP 103


>sp|SYTC_SACI6|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|SYTC_SACI4|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|SYTC_SACI3|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|SYTC_SACI2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|SYTC_SACS2|THREONINE--TRNA ligase catalytic subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|SYTC_SACI7|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|SYTC_SACI1|THREONINE--TRNA ligase catalytic subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 EYGMKTKNIP 10
EYG+K N P
Sbjct: 223 EYGVKPMNCP 232


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EYGMKTKNI 9
+YG+KT+++
Sbjct: 149 KYGIKTRDV 157


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 EYGMKTKNI 9
+YG++TK++
Sbjct: 94 KYGVRTKDV 102


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus (Sulfolobus

Query: 3 GMKTKNIP 10
G+KTK++P
Sbjct: 135 GVKTKSLP 142




10|Sequence|46|55|TKNIPVYECE

>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KNIPVYECE 10
KN P+ ECE
Sbjct: 121 KNKPIEECE 129


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 KNIPVYECE 10
KN P+ ECE
Sbjct: 121 KNKPIEECE 129


>sp|RL30E_SACS2|LARGE ribosomal subunit protein eL30|Saccharolobus solfataricus (strain

Query: 3 NIPVYE 8
NIPVYE
Sbjct: 65 NIPVYE 70


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 IPVYECE 10
IP+++CE
Sbjct: 460 IPIWQCE 466


>sp|MPTA_METBU|GTP cyclohydrolase MptA|Methanococcoides burtonii (strain DSM 6242

Query: 3 NIPVYECE 10
N+PVYE E
Sbjct: 81 NLPVYEIE 88


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 IPVYECE 10
+PV+ECE
Sbjct: 480 LPVWECE 486


>sp|RL30E_PYRHO|LARGE ribosomal subunit protein eL30|Pyrococcus horikoshii (strain ATCC

Query: 3 NIPVYECE 10
+IPVYE E
Sbjct: 57 DIPVYEFE 64


>sp|RL30E_PYRFU|LARGE ribosomal subunit protein eL30|Pyrococcus furiosus (strain ATCC

Query: 3 NIPVYECE 10
+IPVYE E
Sbjct: 57 DIPVYEFE 64


>sp|RL30E_PYRAB|LARGE ribosomal subunit protein eL30|Pyrococcus abyssi (strain GE5 /

Query: 3 NIPVYECE 10
+IPVYE E
Sbjct: 57 DIPVYEFE 64


>sp|TOP6A_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 3 NIPVYEC 9
N+PVY C
Sbjct: 230 NLPVYIC 236


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 2 KNIPVYECE 10
K++PV CE
Sbjct: 101 KDLPVRSCE 109


>sp|RL30E_THESM|LARGE ribosomal subunit protein eL30|Thermococcus sibiricus (strain DSM

Query: 3 NIPVYECE 10
+IPVYE E
Sbjct: 57 SIPVYEFE 64


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 IPVYECE 10
IP+++CE
Sbjct: 514 IPIWKCE 520


>sp|RL30E_THEKO|LARGE ribosomal subunit protein eL30|Thermococcus kodakarensis (strain

Query: 4 IPVYECE 10
IPVYE E
Sbjct: 59 IPVYEFE 65


>sp|RL30E_THEGJ|LARGE ribosomal subunit protein eL30|Thermococcus gammatolerans (strain

Query: 4 IPVYECE 10
IPVYE E
Sbjct: 59 IPVYEFE 65


>sp|RL30E_THECE|LARGE ribosomal subunit protein eL30|Thermococcus celer

Query: 4 IPVYECE 10
IPVYE E
Sbjct: 59 IPVYEFE 65


>sp|COMB_METTH|2-PHOSPHOSULFOLACTATE phosphatase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TKNIPVY 7
T N+PVY
Sbjct: 205 TGNVPVY 211


>sp|RL30E_SULTO|LARGE ribosomal subunit protein eL30|Sulfurisphaera tokodaii (strain

Query: 3 NIPVYE 8
NIPVY+
Sbjct: 61 NIPVYQ 66


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 5 PVYEC 9
PVYEC
Sbjct: 85 PVYEC 89


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 KNIPVYE 8
KNIP Y+
Sbjct: 825 KNIPAYK 831


>sp|FLPA_META3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus aeolicus (strain

Query: 1 TKNIPVYECE 10
T+N PVY E
Sbjct: 97 TENSPVYSVE 106


>sp|MRE11_METMP|DNA double-strand break repair protein|Methanococcus maripaludis

Query: 2 KNIPVY 7
KNIP+Y
Sbjct: 74 KNIPIY 79


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KNIPVYEC 9
KN+ YEC
Sbjct: 870 KNLEAYEC 877


>sp|RL30E_METJA|LARGE ribosomal subunit protein eL30|Methanocaldococcus jannaschii

Query: 3 NIPVYE 8
NIPVY+
Sbjct: 63 NIPVYQ 68


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 1 TKNIPVYE 8
T+NIP Y+
Sbjct: 51 TENIPCYK 58


>sp|PSTB_METJA|PHOSPHATE import ATP-binding protein PstB|Methanocaldococcus jannaschii

Query: 3 NIPVYE 8
N+P+YE
Sbjct: 25 NLPIYE 30


>sp|Y209_PYRHO|UPF0146 protein PH0209|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KNIPVYECE 10
K IP+Y+ E
Sbjct: 122 KGIPIYKWE 130


>sp|Y2214_ARCFU|UNCHARACTERIZED protein AF_2214|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 KNIPVYECE 10
KN+ +YE E
Sbjct: 122 KNLMIYESE 130


>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TKNIPVYE 8
TKN+P+ E
Sbjct: 669 TKNVPLAE 676


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 3 NIPVYE 8
N+P+YE
Sbjct: 24 NLPIYE 29




11|Sequence|51|60|VYECERSDVQ

>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 VYECERSDV 9
+YEC ++DV
Sbjct: 296 MYECVKNDV 304


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 VYECERSDVQ 10
+Y ERSD++
Sbjct: 437 MYAAERSDIE 446


>sp|FLPA_SACS2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus solfataricus

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|FLPA_SACI3|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|FLPA_SACI7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|FLPA_SACI6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|FLPA_SACI4|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|FLPA_SACI2|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|FLPA_SACI1|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Saccharolobus islandicus (strain

Query: 1 VYECERSD 8
+YECE +D
Sbjct: 15 IYECEFND 22


>sp|ACD1_ARCFU|ACETATE--COA ligase [ADP-forming] I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VYECERSDVQ 10
V EC R DV+
Sbjct: 79 VEECGRKDVE 88


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YECERSDV 9
YE E+SDV
Sbjct: 82 YEVEKSDV 89


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 2 YECERSDV 9
YE E+SDV
Sbjct: 82 YEVEKSDV 89


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 2 YECERSDV 9
YE E+SDV
Sbjct: 82 YEIEKSDV 89


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 ECERSDV 9
ECE +DV
Sbjct: 313 ECEHADV 319


>sp|TREZ_SACS2|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VYECERSD 8
+YE ER D
Sbjct: 33 IYEMERDD 40




12|Sequence|56|65|RSDVQIHVPT

>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 2 SDVQIHVPT 10
SD+ IHVP+
Sbjct: 669 SDIHIHVPS 677


>sp|THYX_PYRHO|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 SDVQIHVP 9
+DV+IH+P
Sbjct: 40 NDVEIHLP 47


>sp|RS17_SULAC|SMALL ribosomal subunit protein uS17|Sulfolobus acidocaldarius (strain

Query: 1 RSDVQIHVPT 10
RS + +H+P+
Sbjct: 74 RSRIHVHIPS 83


>sp|LON_METST|LON protease|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RSDVQIHVP 9
+ D+ IHVP
Sbjct: 693 KRDIHIHVP 701


>sp|TRMY_METBU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcoides

Query: 1 RSDVQIHV 8
R DVQ+H+
Sbjct: 47 RRDVQVHL 54


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SDVQIHVP 9
SDV++H P
Sbjct: 492 SDVELHRP 499


>sp|ASPD_METTH|L-ASPARTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SDVQIHVPT 10
+D IHVP+
Sbjct: 114 NDATIHVPS 122


>sp|Y405_HALVD|PROBABLE cell surface fusion protein|Haloferax volcanii (strain ATCC 29605

Query: 2 SDVQIHVPT 10
+DVQ+ VP+
Sbjct: 622 TDVQVKVPS 630


>sp|MTAP_PYRAE|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DVQIHVP 9
+VQIH P
Sbjct: 41 EVQIHTP 47




13|Sequence|61|70|IHVPTFTFRV

>sp|ARE_SACSO|ARYLESTERASE solfataricus (Sulfolobus solfataricus)

Query: 3 VPTFTFRV 10
VPT +FRV
Sbjct: 269 VPTLSFRV 276


>sp|GGGPS_METMA|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IHVPTFTF 8
IHVPT F
Sbjct: 71 IHVPTILF 78


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IHVPTFTFRV 10
+ VP F FRV
Sbjct: 423 VGVPKFKFRV 432


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IHVPTFTFRV 10
IH+P F F V
Sbjct: 261 IHLPIFDFIV 270


>sp|RIFK_PYRCJ|RIBOFLAVIN kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IHVPTFT 7
IH+P FT
Sbjct: 144 IHIPGFT 150


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IHVPTFTF 8
+H PT+T+
Sbjct: 114 VHQPTYTY 121


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 IHVPTFTFR 9
IH+PT R
Sbjct: 222 IHIPTIVSR 230


>sp|MCRA_METAC|METHYL-COENZYME M reductase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 IHVPTFTFR 9
IH+PT R
Sbjct: 222 IHIPTIVSR 230


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VPTFTFRV 10
+PT TFRV
Sbjct: 936 LPTGTFRV 943


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 1 IHVPTFT 7
IHV TFT
Sbjct: 108 IHVGTFT 114




14|Sequence|66|75|FTFRVTVGDI

>sp|DPCKG_METTH|GTP-DEPENDENT dephospho-CoA kinase|Methanothermobacter thermautotrophicus

Query: 2 TFRVTVGDI 10
+F +TVGD+
Sbjct: 31 SFLITVGDV 39


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TFRVTVGDI 10
+FRVT+ DI
Sbjct: 353 SFRVTIEDI 361


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 2 TFRVTVGDI 10
T VTVGD+
Sbjct: 23 TILVTVGDV 31


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 FTFRVTVGDI 10
FT+++T G+I
Sbjct: 417 FTWKLTKGEI 426


>sp|Y2513_HALS3|UPF0173 metal-dependent hydrolase OE_2513F|Halobacterium salinarum

Query: 2 TFRVTVG 8
T+RVTVG
Sbjct: 10 TWRVTVG 16


>sp|Y1038_HALSA|UPF0173 metal-dependent hydrolase VNG_1038C|Halobacterium salinarum

Query: 2 TFRVTVG 8
T+RVTVG
Sbjct: 10 TWRVTVG 16


>sp|Y296_METJA|PROBABLE metallo-hydrolase MJ0296|Methanocaldococcus jannaschii (strain

Query: 1 FTFRVTVGDI 10
F F++ +G+I
Sbjct: 9 FLFKILIGEI 18




15|Sequence|71|80|TVGDITCTGE

>sp|Y1288_METJA|UNCHARACTERIZED protein MJ1288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DITCTG 9
DI+CTG
Sbjct: 172 DISCTG 177


>sp|PYRDB_METAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina acetivorans

Query: 2 VGDITCTG 9
V DITC G
Sbjct: 176 VADITCIG 183


>sp|Y1381_PYRFU|UPF0179 protein PF1381|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGDITCTG 9
+GDI C G
Sbjct: 122 IGDIECNG 129


>sp|NADA_METJA|QUINOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGDITCT 8
+ DITCT
Sbjct: 122 LADITCT 128


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 TVGDITCTGE 10
TV D+T TG+
Sbjct: 6433 TVSDVTATGD 6442


>sp|PYRDB_METMA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanosarcina mazei (strain

Query: 2 VGDITCTG 9
V DITC G
Sbjct: 179 VADITCIG 186


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 VGDITCT 8
+G+ITC+
Sbjct: 148 IGEITCS 154


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 2 VGDITCTGE 10
+G+ TC G+
Sbjct: 99 IGETTCEGK 107


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GDITCTGE 10
GD+ CT +
Sbjct: 205 GDVLCTAD 212


>sp|Y636_PYRAB|UPF0179 protein PYRAB06360|Pyrococcus abyssi (strain GE5 /

Query: 2 VGDITCTG 9
+GD+ C G
Sbjct: 122 LGDVECNG 129




16|Sequence|76|85|TCTGEGTSKK

>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 TCTGEGTS 8
TC GEGT+
Sbjct: 42 TCWGEGTA 49


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 CTGEGTS 8
C GEGTS
Sbjct: 464 CGGEGTS 470


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CTGEGTSKK 10
C GEGT+ +
Sbjct: 269 CDGEGTATQ 277


>sp|LIPA_PYRCJ|LIPOYL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 TCTGEGTS 8
+C GEGT+
Sbjct: 43 SCWGEGTA 50


>sp|LIPA_PYRAR|LIPOYL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 CTGEGTS 8
C GEGT+
Sbjct: 45 CWGEGTA 51




17|Sequence|81|90|GTSKKLAKHR

>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GTSKKLAKHR 10
GT++++ KHR
Sbjct: 192 GTTQRILKHR 201


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 GTSKKLAKH 9
GTSK LA H
Sbjct: 950 GTSKFLADH 958


>sp|IF2A_PYRAE|TRANSLATION initiation factor 2 subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 GTSKKLAKH 9
GT KK+A+H
Sbjct: 17 GTVKKIAEH 25


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTSKKLAKHR 10
GT KK+ K++
Sbjct: 10 GTGKKVVKYK 19


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TSKKLAKHR 10
T+KKLAK +
Sbjct: 141 TAKKLAKEK 149


>sp|AMPPA_THEKO|AMP phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTSKKLAK 8
GT KK+AK
Sbjct: 371 GTGKKMAK 378


>sp|NURA_SULAC|DNA double-strand break repair nuclease|Sulfolobus acidocaldarius

Query: 3 SKKLAKHR 10
SKKL +H+
Sbjct: 136 SKKLGRHK 143




18|Sequence|86|95|LAKHRAAEAA

***** No hits found ******


19|Sequence|91|100|AAEAAINILK

>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 AAEAAINILK 10
A+EAAI+ILK
Sbjct: 511 ASEAAISILK 520


>sp|PURE_METJA|N5-CARBOXYAMINOIMIDAZOLE ribonucleotide mutase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AEAAINILK 10
AE A+NILK
Sbjct: 15 AEKAVNILK 23


>sp|SYY1_PYRAE|TYROSINE--TRNA ligase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 AEAAINILK 10
AEA INIL+
Sbjct: 340 AEALINILE 348


>sp|BIOW_METMP|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AAEAAINILK 10
+ E AINILK
Sbjct: 79 SREFAINILK 88




20|Sequence|96|105|INILKANASI

>sp|DPHB_ARCFU|DIPHTHINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 INILKANASI 10
+N++KAN SI
Sbjct: 143 VNVIKANRSI 152


>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 INILKANA 8
I ILKANA
Sbjct: 140 IEILKANA 147


>sp|HTR2_NATPH|SENSORY rhodopsin II transducer|Natronomonas pharaonis (Natronobacterium

Query: 2 NILKANASI 10
NIL NASI
Sbjct: 346 NILALNASI 354




21|Sequence|101|110|ANASICFAVP

>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 1 ANASICFAV 9
ANA+I FAV
Sbjct: 14 ANAAISFAV 22


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ANASICFAVP 10
ANAS C P
Sbjct: 167 ANASACLVSP 176


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 2 NASICFAV 9
N +CFA+
Sbjct: 78 NGGVCFAI 85


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 ASICFAVP 10
A IC AVP
Sbjct: 368 AGICTAVP 375




22|Sequence|106|115|CFAVPDPLMP

>sp|Y810_METJA|PROTEIN MJ0810|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFAVPDPLMP 10
C +P+P+MP
Sbjct: 59 CIGIPEPIMP 68


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CFAVPDPLMP 10
C +P+P+MP
Sbjct: 59 CIGIPEPVMP 68


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CFAVPDPLMP 10
CFA D L+P
Sbjct: 183 CFAYTDALVP 192


>sp|PURL_IGNH4|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 VPDPLM 9
VPDPLM
Sbjct: 222 VPDPLM 227


>sp|IF2B_NATPD|TRANSLATION initiation factor 2 subunit|Natronomonas pharaonis (strain ATCC

Query: 2 FAVPDP 7
F+VPDP
Sbjct: 24 FSVPDP 29


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 VPDPLM 9
+PDPLM
Sbjct: 157 IPDPLM 162


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 VPDPLMP 10
VP+PL P
Sbjct: 429 VPEPLRP 435


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FAVPDPLMP 10
F +PD ++P
Sbjct: 202 FKIPDGILP 210


>sp|SYW_PYRFU|TRYPTOPHAN--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AVPDPL 8
A+PDPL
Sbjct: 378 AIPDPL 383


>sp|SYS_HALWD|SERINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 VPDPLMP 10
+P+PL P
Sbjct: 429 IPEPLQP 435


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 2 FAVPDPLMP 10
FA+ DP +P
Sbjct: 173 FAILDPRLP 181




23|Sequence|111|120|DPLMPDPSKQ

>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 DPLMPDPSKQ 10
+P PDPSK+
Sbjct: 209 NPYHPDPSKR 218


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 1 DPLMPDPSKQ 10
+P +PDP K+
Sbjct: 47 NPPLPDPEKE 56


>sp|PRIL_METAR|DNA primase large subunit PriL|Methanocella arvoryzae (strain DSM

Query: 1 DPLMPDPSKQ 10
D L+PDP ++
Sbjct: 57 DDLLPDPERE 66


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 4 MPDPSK 9
+PDPSK
Sbjct: 197 LPDPSK 202


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 PLMPDPSKQ 10
P MP+PS++
Sbjct: 201 PEMPNPSRE 209


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DPLMPD 6
+PLMPD
Sbjct: 485 EPLMPD 490


>sp|MTRD_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 1 DPLMPDPSK 9
DP+ DP K
Sbjct: 117 DPITKDPQK 125


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 DPLMPDPS 8
DP PDPS
Sbjct: 240 DPRHPDPS 247


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 PLMPDPSK 9
PL DPSK
Sbjct: 339 PLFSDPSK 346


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LMPDPSK 9
++PDPSK
Sbjct: 882 VIPDPSK 888


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 DPLMPDPSK 9
DP P+P+K
Sbjct: 206 DPRSPNPAK 214


>sp|DP2L_METBF|DNA polymerase II large subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 PLMPDP 7
PLMP P
Sbjct: 425 PLMPSP 430


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPLMPDP 7
+PL+P+P
Sbjct: 453 EPLVPEP 459


>sp|DCD_PYRIL|DCTP deaminase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DPLMPDPSKQ 10
DPL PD ++
Sbjct: 20 DPLAPDTVRE 29


>sp|DP2L_METMA|DNA polymerase II large subunit|Methanosarcina mazei (strain ATCC

Query: 2 PLMPDP 7
PLMP P
Sbjct: 425 PLMPSP 430


>sp|DP2L_METAC|DNA polymerase II large subunit|Methanosarcina acetivorans (strain ATCC

Query: 2 PLMPDP 7
PLMP P
Sbjct: 425 PLMPSP 430


>sp|Y1601_METJA|UNCHARACTERIZED protein MJ1601|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPLMPDPSKQ 10
D +MP P K+
Sbjct: 114 DLIMPHPDKE 123


>sp|DCD_PYRAE|DCTP deaminase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DPLMPDPSKQ 10
DPL PD ++
Sbjct: 20 DPLYPDTIRE 29


>sp|OFOB1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPLMPDPSK 9
DP++ DPS+
Sbjct: 227 DPIVRDPSE 235


>sp|DPOL1_METTH|DNA polymerase PolB subunit 1|Methanothermobacter thermautotrophicus

Query: 4 MPDPSK 9
MPDP K
Sbjct: 184 MPDPEK 189




24|Sequence|116|125|DPSKQPKNQL

>sp|COBD_THEKO|PROBABLE cobalamin biosynthesis protein CobD|Thermococcus kodakarensis

Query: 2 PSKQPKNQ 9
P K+PKN+
Sbjct: 253 PGKEPKNE 260


>sp|ATGT_KORCO|TRNA-GUANINE(15) transglycosylase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DPSKQPKNQL 10
DPS +PK+++
Sbjct: 530 DPSIRPKSEV 539


>sp|RL24_NITMS|LARGE ribosomal subunit protein uL24|Nitrosopumilus maritimus (strain

Query: 1 DPSKQPK 7
DP KQPK
Sbjct: 116 DPRKQPK 122


>sp|IF2G_THEON|TRANSLATION initiation factor 2 subunit|Thermococcus onnurineus (strain NA1)

Query: 1 DPSKQPK 7
DP+K PK
Sbjct: 204 DPNKPPK 210


>sp|IF2G_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 DPSKQPK 7
DP+K PK
Sbjct: 204 DPNKPPK 210


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DPSKQPKNQL 10
DPS KN+L
Sbjct: 385 DPSSDLKNKL 394




25|Sequence|121|130|PKNQLNPIGS

>sp|DLD_ARCFU|D-LACTATE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PKNQLNP 7
PKN LNP
Sbjct: 430 PKNILNP 436


>sp|PSTA_METJA|PROBABLE phosphate transport system permease|Methanocaldococcus jannaschii

Query: 1 PKNQLNPIGS 10
P N L P+G+
Sbjct: 224 PTNPLEPVGA 233


>sp|QOX1_SULAC|QUINOL oxidase subunit 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PKNQLNPI 8
P+N +NP+
Sbjct: 355 PENSINPL 362


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NQLNPIGS 10
NQL P+G+
Sbjct: 709 NQLPPVGA 716


>sp|Y993_METJA|PUTATIVE hydrogenase expression/formation protein MJ0993|Methanocaldococcus

Query: 5 LNPIGS 10
LNP+GS
Sbjct: 335 LNPVGS 340




26|Sequence|126|135|NPIGSLQELA

>sp|MFNA_METTP|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanothrix thermoacetophila

Query: 1 NPIGSLQELA 10
+PIG L ELA
Sbjct: 175 DPIGDLSELA 184


>sp|HELS_CALMQ|ATP-DEPENDENT DNA helicase Hel308|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 IGSLQELA 10
IG+LQELA
Sbjct: 633 IGALQELA 640


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 1 NPIGSLQEL 9
+P+GS QE+
Sbjct: 219 DPLGSAQEI 227


>sp|PANE_PYRAB|2-DEHYDROPANTOATE 2-reductase|Pyrococcus abyssi (strain GE5 /

Query: 1 NPIGSLQEL 9
NPIG+L E+
Sbjct: 187 NPIGTLLEV 195


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 NPIGSLQELA 10
NP G+L LA
Sbjct: 166 NPTGNLTSLA 175


>sp|NADE_HALSA|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NPIGSLQEL 9
NPIG+L ++
Sbjct: 171 NPIGNLYKM 179


>sp|NADE_HALS3|NH(3)-DEPENDENT NAD(+) synthetase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NPIGSLQEL 9
NPIG+L ++
Sbjct: 171 NPIGNLYKM 179




27|Sequence|131|140|LQELAIHHGW

>sp|Y1214_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus

Query: 1 LQELAIHHGW 10
+QEL I+H W
Sbjct: 41 VQELEIYHWW 50


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 4 LAIHHGW 10
LA+ HGW
Sbjct: 145 LAVEHGW 151


>sp|GSA_PYRNV|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 LQELAIHHG 9
L ELAI HG
Sbjct: 374 LHELAIKHG 382


>sp|GSA_PYRIL|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LQELAIHHG 9
L ELAI HG
Sbjct: 374 LHELAIKHG 382


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 LAIHHGW 10
LA+ HGW
Sbjct: 145 LAVEHGW 151


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LQELAIHHG 9
L ELAI HG
Sbjct: 389 LHELAIGHG 397


>sp|DMSR_HALVD|DIMETHYL sulfoxide reductase transcriptional activator|Haloferax volcanii

Query: 4 LAIHHGW 10
+A+HHG+
Sbjct: 165 IAVHHGY 171


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 LQELAIHHGW 10
++EL ++H W
Sbjct: 181 IEELKMYHKW 190


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 LQELAIHHGW 10
++EL ++H W
Sbjct: 181 IEELKMYHRW 190


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 LQELAIHHGW 10
++EL ++H W
Sbjct: 181 IEELKMYHRW 190


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 LQELAIHHGW 10
++EL ++H W
Sbjct: 181 IEELKMYHRW 190


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 LQELAIHHGW 10
++EL ++H W
Sbjct: 181 IEELKMYHRW 190


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 3 ELAIHHGW 10
ELA+ HG+
Sbjct: 353 ELALQHGY 360


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 6 IHHGW 10
IHH W
Sbjct: 546 IHHAW 550


>sp|GSA_PYRAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LQELAIHHG 9
L E+A+ HG
Sbjct: 374 LHEIALRHG 382


>sp|TYW3_METJA|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 ELAIHHG 9
ELAIH G
Sbjct: 116 ELAIHSG 122


>sp|KTHY_METHJ|PROBABLE thymidylate kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 AIHHGW 10
A+H GW
Sbjct: 113 AVHQGW 118


>sp|SAT_CENSY|SULFATE adenylyltransferase|Cenarchaeum symbiosum (strain A)

Query: 5 AIHHG 9
AIHHG
Sbjct: 264 AIHHG 268


>sp|HIS8_SACS2|HISTIDINOL-PHOSPHATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LQELAIHHG 9
LQE+ + HG
Sbjct: 330 LQEMLMRHG 338


>sp|GSA_PYRAE|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LQELAIHHG 9
L E+A+ HG
Sbjct: 374 LHEIALKHG 382


>sp|DP2L_PICTO|DNA polymerase II large subunit|Picrophilus torridus (strain ATCC 700027

Query: 4 LAIHHG 9
L IHHG
Sbjct: 1021 LTIHHG 1026


>sp|KTHY_METLZ|PROBABLE thymidylate kinase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 AIHHGW 10
A+H GW
Sbjct: 113 AVHAGW 118


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter marburgensis

Query: 6 IHHGW 10
IHH W
Sbjct: 102 IHHDW 106


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 6 IHHGW 10
IHH W
Sbjct: 102 IHHDW 106




28|Sequence|136|145|IHHGWRLPEY

>sp|SYE_METM5|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 HHGWRLPEY 10
+ GW +PEY
Sbjct: 306 YFGWEIPEY 314


>sp|SYE_META3|GLUTAMATE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HHGWRLPEY 10
+ GW +PEY
Sbjct: 312 YFGWEMPEY 320


>sp|SYE_METMP|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HHGWRLPEY 10
+ GW +PEY
Sbjct: 306 YFGWEIPEY 314


>sp|SYE_METM7|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HHGWRLPEY 10
+ GW +PEY
Sbjct: 306 YFGWEIPEY 314


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 HHGWRLPEY 10
+ GW +PEY
Sbjct: 306 YFGWEIPEY 314


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 HHGWRLPEY 10
H GW++P Y
Sbjct: 316 HFGWKVPVY 324


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 HHGWRLPEY 10
H GW +PE+
Sbjct: 310 HFGWDVPEF 318


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 HHGWRLPEY 10
H GW +PE+
Sbjct: 309 HMGWDVPEF 317


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IHHGWRLPE 9
IH G+R+PE
Sbjct: 369 IHMGYRIPE 377


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 3 HGWRLPEY 10
H W LP Y
Sbjct: 120 HAWDLPRY 127


>sp|PFP_THETK|PYROPHOSPHATE--FRUCTOSE 6-phosphate 1-phosphotransferase|Thermoproteus tenax (strain ATCC

Query: 1 IHHGWR 6
I+HGWR
Sbjct: 35 IYHGWR 40


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 IHHGWRLPE 9
+HH WRL E
Sbjct: 79 VHHSWRLNE 87


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 3 HGWRLPE 9
HGWR+ E
Sbjct: 137 HGWRVQE 143


>sp|UVRB_METS3|UVRABC system protein B|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IHHGWRLP 8
+ HG+RLP
Sbjct: 360 VEHGFRLP 367


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 IHHGWRLPE 9
+HH WRL E
Sbjct: 79 VHHTWRLNE 87


>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 3 HGWRLPE 9
HGWR+ E
Sbjct: 136 HGWRVHE 142


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 3 HGWRLPEY 10
HG R PEY
Sbjct: 222 HGLREPEY 229


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HHGWRLPEY 10
+ GW +PE+
Sbjct: 304 YFGWEMPEF 312


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 HHGWRLPEY 10
+ GW PEY
Sbjct: 306 YFGWESPEY 314


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 4 GWRLPE 9
GW++PE
Sbjct: 795 GWKMPE 800


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 4 GWRLPE 9
GW++PE
Sbjct: 792 GWKMPE 797


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 HHGWRLPEY 10
H GW PEY
Sbjct: 313 HLGWDTPEY 321


>sp|Y245_SULTO|UPF0210 protein STK_02450|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HHGWRLPE 9
HHG +PE
Sbjct: 197 HHGMGMPE 204


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GWRLPEY 10
GWR P Y
Sbjct: 174 GWRSPNY 180


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HHGWRLPEY 10
HH W+ Y
Sbjct: 330 HHEWKFDNY 338


>sp|SYR_HALLT|ARGININE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 HHGWRLPEY 10
HH W+ Y
Sbjct: 328 HHEWKFDNY 336


>sp|IF2P_METB6|PROBABLE translation initiation factor IF-2|Methanoregula boonei (strain DSM

Query: 3 HGWRL 7
HGWR+
Sbjct: 136 HGWRI 140


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HHGWRLPEY 10
HH W+ Y
Sbjct: 324 HHEWKFDTY 332


>sp|SYR_HALMA|ARGININE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HHGWRLPEY 10
HH W+ Y
Sbjct: 324 HHEWKFDTY 332


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii

Query: 3 HGWRLPE 9
HG R+PE
Sbjct: 17 HGLRVPE 23


>sp|Y138_META3|PROTEIN Maeo_0138|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IHHGWRLPEY 10
I H W + EY
Sbjct: 147 IEHNWDIGEY 156


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 HHGWRLPE 9
H GW+ PE
Sbjct: 306 HMGWKYPE 313


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 IHHGW 5
IHH W
Sbjct: 546 IHHAW 550


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GWRLPEY 10
G+R PEY
Sbjct: 212 GFRTPEY 218


>sp|UVRB_METBU|UVRABC system protein B|Methanococcoides burtonii (strain DSM 6242

Query: 1 IHHGWRLP 8
I++G+RLP
Sbjct: 363 INYGFRLP 370


>sp|CRUF_HALJT|BISANHYDROBACTERIORUBERIN hydratase|Haloarcula japonica (strain ATCC 49778

Query: 4 GWRLPE 9
GW LPE
Sbjct: 11 GWTLPE 16


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HHGWRLPEY 10
H GW + +Y
Sbjct: 73 HFGWDIAQY 81


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 2 HHGWRLPEY 10
++ W LP+Y
Sbjct: 236 YYYWELPDY 244


>sp|RRP41_HYPBU|EXOSOME complex component Rrp41|Hyperthermus butylicus (strain DSM 5456

Query: 1 IHHGWRLPE 9
I H RLPE
Sbjct: 24 IRHDGRLPE 32


>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 GWRLPE 9
GW +PE
Sbjct: 259 GWHVPE 264


>sp|TIAS_HYPBU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Hyperthermus butylicus

Query: 3 HGWRLPEY 10
HG+RL +Y
Sbjct: 42 HGYRLADY 49


>sp|Y1830_SULTO|UPF0273 protein STK_18300|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HHGWRLPEY 10
H GW + +Y
Sbjct: 74 HFGWDITKY 82


>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 1 IHHGW 5
+HHGW
Sbjct: 80 VHHGW 84


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IHHGWRLPEY 10
+H G +P+Y
Sbjct: 392 LHSGLMIPQY 401


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IHHGWRLPEY 10
+H G +P+Y
Sbjct: 392 LHSGLMIPQY 401


>sp|GLPK_THEGJ|GLYCEROL kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 IHHGWR 6
++HGW+
Sbjct: 473 LYHGWK 478


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 IHHGWRL 7
IH GW +
Sbjct: 117 IHRGWTI 123


>sp|SYI_NATPD|ISOLEUCINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HGWRLPE 9
HGW L E
Sbjct: 594 HGWALAE 600


>sp|RL10E_METLZ|LARGE ribosomal subunit protein uL16|Methanocorpusculum labreanum (strain

Query: 1 IHHGWRLP 8
+H G++LP
Sbjct: 150 LHSGYKLP 157


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IHHGWRL 7
IH GW +
Sbjct: 114 IHEGWSI 120


>sp|SYE_METTH|GLUTAMATE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 HHGWRLPEY 10
H GW PE+
Sbjct: 309 HLGWEPPEF 317




29|Sequence|141|150|RLPEYTLSQE

>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 LPEYTLSQ 9
PEYTLS+
Sbjct: 419 FPEYTLSR 426


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 2 LPEYTLSQ 9
PEYTLS+
Sbjct: 419 FPEYTLSR 426


>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 1 RLPEYTLSQ 9
+LPEY L++
Sbjct: 192 KLPEYVLTK 200


>sp|PRIL_PYRAB|DNA primase large subunit PriL|Pyrococcus abyssi (strain GE5 /

Query: 1 RLPEYTL 7
+LPEYT+
Sbjct: 129 KLPEYTI 135


>sp|PYRB_THEVO|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma volcanium

Query: 1 RLPEYTLS 8
RLPEY S
Sbjct: 192 RLPEYVYS 199


>sp|AGLQ_HALVD|ARCHAEAL glycosylation protein Q|Haloferax volcanii (strain ATCC 29605

Query: 4 EYTLSQE 10
EYTLS+E
Sbjct: 282 EYTLSEE 288


>sp|GATE_THESM|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermococcus sibiricus (strain DSM 12597

Query: 2 LPEYTLSQE 10
LP Y +SQE
Sbjct: 351 LPNYGISQE 359




30|Sequence|146|155|TLSQEGGPAH

>sp|HIS3_METBU|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LSQEGGPAH 10
+SQEGG H
Sbjct: 86 ISQEGGACH 94


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 4 QEGGPAH 10
QEGGP H
Sbjct: 435 QEGGPRH 441


>sp|CAS1_METTH|CRISPR-ASSOCIATED endonuclease Cas1|Methanothermobacter thermautotrophicus (strain

Query: 2 LSQEGGPAH 10
LS+EG P H
Sbjct: 68 LSKEGIPIH 76


>sp|CDC6Q_HALMA|ORC1-TYPE DNA replication protein 17|Haloarcula marismortui (strain ATCC

Query: 1 TLSQEGG 7
T+SQEGG
Sbjct: 16 TVSQEGG 22


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 5 EGGPAH 10
EGGP H
Sbjct: 433 EGGPRH 438




31|Sequence|151|160|GGPAHKREYT

>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GPAHKREY 9
GP KREY
Sbjct: 140 GPEKKREY 147


>sp|RPIA_METMA|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 105 GGAAHTRE 112


>sp|RPIA_METAC|RIBOSE-5-PHOSPHATE isomerase A|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 105 GGAAHTRE 112


>sp|RPIA_HALMA|RIBOSE-5-PHOSPHATE isomerase A|Haloarcula marismortui (strain ATCC 43049

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 99 GGAAHARE 106


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GPAHKREYT 10
GPA RE+T
Sbjct: 90 GPAGTREFT 98


>sp|RPIA_HALSA|RIBOSE-5-PHOSPHATE isomerase A|Halobacterium salinarum (strain ATCC 700922

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 98 GGAAHTRE 105


>sp|RPIA_HALS3|RIBOSE-5-PHOSPHATE isomerase A|Halobacterium salinarum (strain ATCC 29341

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 98 GGAAHTRE 105


>sp|Y1278_METJA|UNCHARACTERIZED protein MJ1278|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HKREYT 10
H REYT
Sbjct: 12 HSREYT 17


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 GGPAHKREY 9
GGP +EY
Sbjct: 224 GGPGATKEY 232


>sp|RF1_PICTO|PEPTIDE chain release factor subunit|Picrophilus torridus (strain ATCC

Query: 1 GGPAHKREY 9
GGP +EY
Sbjct: 220 GGPGATKEY 228


>sp|RPIA_HALWD|RIBOSE-5-PHOSPHATE isomerase A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 102 GGAAHARE 109


>sp|RF1_THEVO|PEPTIDE chain release factor subunit|Thermoplasma volcanium (strain ATCC

Query: 1 GGPAHKREY 9
GGP +EY
Sbjct: 224 GGPGATKEY 232


>sp|RL11_ACIAM|LARGE ribosomal subunit protein uL11|Acidianus ambivalens

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 1 GGPAHKREYT 10
G H REYT
Sbjct: 245 AGILHYREYT 254


>sp|RPIA_NATPD|RIBOSE-5-PHOSPHATE isomerase A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 100 GGAAHARE 107


>sp|RL11_SULAC|LARGE ribosomal subunit protein uL11|Sulfolobus acidocaldarius (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SULTO|LARGE ribosomal subunit protein uL11|Sulfurisphaera tokodaii (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RPIA_HALLT|RIBOSE-5-PHOSPHATE isomerase A|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 GGPAHKRE 8
GG AH RE
Sbjct: 113 GGAAHARE 120


>sp|RL11_SACI4|LARGE ribosomal subunit protein uL11|Saccharolobus islandicus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SACI1|LARGE ribosomal subunit protein uL11|Saccharolobus islandicus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SACS2|LARGE ribosomal subunit protein uL11|Saccharolobus solfataricus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SACI7|LARGE ribosomal subunit protein uL11|Saccharolobus islandicus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SACI6|LARGE ribosomal subunit protein uL11|Saccharolobus islandicus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SACI3|LARGE ribosomal subunit protein uL11|Saccharolobus islandicus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94


>sp|RL11_SACI2|LARGE ribosomal subunit protein uL11|Saccharolobus islandicus (strain

Query: 1 GGPAHKR 7
G PAHK+
Sbjct: 88 GDPAHKK 94




32|Sequence|156|165|KREYTTICRL

>sp|DPCKG_AERPE|GTP-DEPENDENT dephospho-CoA kinase|Aeropyrum pernix (strain ATCC 700893

Query: 4 YTTICRL 10
YTTIC+L
Sbjct: 107 YTTICKL 113


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 1 KREYTTICRL 10
+REY CRL
Sbjct: 76 RREYAEYCRL 85


>sp|PDXT_METMA|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina mazei (strain

Query: 3 EYTTICRL 10
E TT+CRL
Sbjct: 53 ESTTLCRL 60


>sp|PDXT_METBF|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina barkeri (strain

Query: 3 EYTTICRL 10
E TT+CRL
Sbjct: 53 ESTTLCRL 60


>sp|PDXT_METAR|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocella arvoryzae (strain

Query: 3 EYTTICRL 10
E TT+CRL
Sbjct: 50 ESTTLCRL 57


>sp|PDXT_METAC|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanosarcina acetivorans

Query: 3 EYTTICRL 10
E TT+CRL
Sbjct: 53 ESTTLCRL 60


>sp|AATB_METS3|A-TYPE ATP synthase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 REYTTI 7
REYTTI
Sbjct: 8 REYTTI 13


>sp|Y1309_STAMF|PROTEIN Smar_1309|Staphylothermus marinus (strain ATCC 43588

Query: 2 REYTTICR 9
REY ICR
Sbjct: 215 REYREICR 222


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 REYTTIC 8
REYT +C
Sbjct: 114 REYTDLC 120


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 REYTTI 7
REYTT+
Sbjct: 9 REYTTV 14


>sp|AATB_METTH|A-TYPE ATP synthase subunit B|Methanothermobacter thermautotrophicus

Query: 2 REYTTI 7
REYTT+
Sbjct: 8 REYTTV 13


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 EYTTICRL 10
+Y+TIC +
Sbjct: 222 DYSTICEI 229


>sp|Y1658_METJA|UNCHARACTERIZED protein MJ1658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 REYTTICR 9
RE+ ICR
Sbjct: 95 REFCNICR 102




33|Sequence|161|170|TICRLESFME

>sp|CETZ2_HALVD|TUBULIN-LIKE protein CetZ2|Haloferax volcanii (strain ATCC 29605

Query: 4 RLESFME 10
R+ESFME
Sbjct: 324 RVESFME 330




34|Sequence|166|175|ESFMETGKGA

>sp|PSB1_CALMQ|PROTEASOME subunit beta 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ESFMETGKGA 10
E FM TG G+
Sbjct: 139 ERFMSTGSGS 148


>sp|Y1005_PYRIL|PROTEIN Pisl_1005|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ESFMETGK 8
E+F++TGK
Sbjct: 22 ETFLKTGK 29


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ESFMETGKG 9
+ F+E GKG
Sbjct: 143 DEFIERGKG 151


>sp|TRPE3_HALMA|ANTHRANILATE synthase component 1 3|Haloarcula marismortui (strain ATCC 43049

Query: 1 ESFMETGKGA 10
ESF+ET + A
Sbjct: 11 ESFIETARAA 20


>sp|PYRC_THEAC|DIHYDROOROTASE acidophilum (strain ATCC 25905

Query: 4 METGKGA 10
METGK A
Sbjct: 121 METGKNA 127




35|Sequence|171|180|TGKGASKKQA

>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain

Query: 2 GKGASKKQA 10
GKGA++ QA
Sbjct: 58 GKGATRTQA 66


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KGASKKQA 10
KG KKQA
Sbjct: 950 KGGKKKQA 957


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KGASKKQA 10
KG KKQA
Sbjct: 950 KGGKKKQA 957




36|Sequence|176|185|SKKQAKRNAA

***** No hits found ******


37|Sequence|181|190|KRNAAEKFLA

>sp|MFNA_HALMA|PROBABLE L-aspartate decarboxylase|Haloarcula marismortui (strain ATCC

Query: 2 RNAAEKFLA 10
R AAE+FLA
Sbjct: 26 REAAERFLA 34


>sp|MFNA_NATPD|PROBABLE L-aspartate decarboxylase|Natronomonas pharaonis (strain ATCC

Query: 2 RNAAEKFLA 10
R AAE+FLA
Sbjct: 25 REAAERFLA 33


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 KRNAAEKFL 9
KR+ A KFL
Sbjct: 552 KRDGANKFL 560


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RNAAEKFLA 10
R AAEKFL
Sbjct: 198 RVAAEKFLG 206


>sp|SAT_ARCFU|SULFATE adenylyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRNAAEKFLA 10
KR+ AEK +A
Sbjct: 21 KRDIAEKMIA 30


>sp|FAEHP_METHJ|BIFUNCTIONAL enzyme Fae/Hps|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RNAAEKFL 9
R+AAE+FL
Sbjct: 369 RHAAEEFL 376


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RNAAEKFLA 10
R+ AEKFL+
Sbjct: 171 RSVAEKFLS 179




38|Sequence|186|195|EKFLAKFSNI

>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 KFLAKFSN 9
KFL KFSN
Sbjct: 343 KFLEKFSN 350


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 2 KFLAKFSNI 10
+FL KF NI
Sbjct: 176 RFLDKFRNI 184


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 KFLAKFSNI 10
+FL KF NI
Sbjct: 176 RFLDKFRNI 184


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 KFLAKFSNI 10
+FL KF NI
Sbjct: 176 RFLDKFRNI 184


>sp|KDGA_SULAC|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EKFLAKF 7
EKFLAK+
Sbjct: 108 EKFLAKY 114


>sp|HERA_SACS2|DNA double-strand break repair helicase|Saccharolobus solfataricus

Query: 1 EKFLAKFSNI 10
E+F+ ++SN+
Sbjct: 281 EEFMDRYSNV 290


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EKFLAKFS 8
E+F+AKF+
Sbjct: 170 EEFIAKFN 177


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 EKFLAKFS 8
E+F+AKF+
Sbjct: 170 EEFIAKFN 177


>sp|SYR_THEKO|ARGININE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KFLAKFSNI 10
KFLAKF +
Sbjct: 564 KFLAKFPEV 572


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 2 KFLAKF 7
KFLAKF
Sbjct: 57 KFLAKF 62


>sp|RS2_THEKO|SMALL ribosomal subunit protein uS2|Thermococcus kodakarensis (strain

Query: 2 KFLAKF 7
KFLAKF
Sbjct: 56 KFLAKF 61


>sp|SPEH_THEGJ|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus gammatolerans (strain DSM

Query: 1 EKFLAKFSNI 10
EKF AK++++
Sbjct: 101 EKFRAKYAHV 110


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 EKFLAKFSNI 10
E+ LAK SNI
Sbjct: 474 EEILAKSSNI 483


>sp|SPEH_PYRFU|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EKFLAKFSNI 10
EKF AK++++
Sbjct: 98 EKFKAKYAHV 107




39|Sequence|191|200|KFSNISPENH

>sp|ARGC_METMP|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KFSNISPEN 9
KF NI+PE+
Sbjct: 59 KFQNIAPED 67


>sp|ACDE1_METMA|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina mazei

Query: 2 FSNISPENH 10
F NIS E+H
Sbjct: 151 FGNISREDH 159


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FSNISPENH 10
+ ++SPE H
Sbjct: 232 YPDVSPETH 240


>sp|ARGC_METM7|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C7 /

Query: 1 KFSNISPEN 9
+F NI+PE+
Sbjct: 59 EFQNIAPED 67


>sp|ARGC_METM6|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C6 /

Query: 1 KFSNISPEN 9
+F NI+PE+
Sbjct: 59 EFQNIAPED 67


>sp|ARGC_METM5|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus maripaludis (strain C5 /

Query: 1 KFSNISPEN 9
+F NI+PE+
Sbjct: 59 EFQNIAPED 67


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 2 FSNISPE 8
FSN+ PE
Sbjct: 319 FSNVGPE 325


>sp|ARGC_METVS|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 KFSNISPEN 9
+F N++PEN
Sbjct: 59 EFKNLNPEN 67


>sp|ACDE1_METTE|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Methanosarcina

Query: 2 FSNISPENH 10
F NIS E H
Sbjct: 151 FGNISREEH 159


>sp|ARGC_META3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FSNISPEN 9
F NISP N
Sbjct: 60 FENISPSN 67


>sp|HLY_NATA1|HALOLYSIN asiatica (strain ATCC 700177

Query: 2 FSNISPE 8
FSN+ PE
Sbjct: 319 FSNLGPE 325


>sp|AROA_THEAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 1 KFSNISPEN 9
KF+N+S N
Sbjct: 402 KFANVSESN 410




40|Sequence|196|205|SPENHISLTN

>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 SPENHISLT 9
SPE+H SLT
Sbjct: 93 SPEHHASLT 101


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 1 SPENHISLTN 10
+ EN+ISLTN
Sbjct: 221 AKENNISLTN 230


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 SPENHISLTN 10
SPE HI + N
Sbjct: 344 SPEAHIEILN 353


>sp|Y1301_METJA|UNCHARACTERIZED ATP-binding protein MJ1301|Methanocaldococcus jannaschii (strain

Query: 1 SPENHISLTN 10
+ EN++SLTN
Sbjct: 273 AKENNMSLTN 282


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 3 ENHISLTN 10
EN+I+LTN
Sbjct: 244 ENNINLTN 251


>sp|Y632_METJA|UNCHARACTERIZED ATP-binding protein MJ0632|Methanocaldococcus jannaschii (strain

Query: 1 SPENHISLTN 10
+ EN+I+LTN
Sbjct: 236 AKENNINLTN 245


>sp|SYK_ARCFU|LYSINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SPENHISLTN 10
SP HI L N
Sbjct: 25 SPSGHIHLGN 34


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SPENHISLTN 10
SP++H+S ++
Sbjct: 263 SPDSHVSTSS 272




41|Sequence|201|210|ISLTNVVGHS

>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 ISLTNVVGHS 10
I+LTNVVG +
Sbjct: 374 IALTNVVGST 383


>sp|CDPAS_METKA|CDP-ARCHAEOL synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 LTNVVGH 9
LTNV+G+
Sbjct: 158 LTNVIGY 164


>sp|CETZ_METTP|TUBULIN-LIKE protein CetZ|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SLTNVVGH 9
SLT +GH
Sbjct: 295 SLTETIGH 302


>sp|GLMS_SULTO|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Sulfurisphaera tokodaii (strain DSM

Query: 1 ISLTNVV 7
ISLTNV+
Sbjct: 368 ISLTNVI 374


>sp|GLMS_AERPE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Aeropyrum pernix (strain ATCC 700893

Query: 1 ISLTNVVGHS 10
I +TNVVG +
Sbjct: 378 IGVTNVVGSA 387


>sp|GLMS_METAC|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina acetivorans (strain

Query: 1 ISLTNVVGHS 10
+++TNVVG +
Sbjct: 380 LAITNVVGST 389




42|Sequence|206|215|VVGHSLGCTW

>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii

Query: 2 VGHSLGCT 9
+G SLGCT
Sbjct: 62 LGESLGCT 69


>sp|PSTA_METJA|PROBABLE phosphate transport system permease|Methanocaldococcus jannaschii

Query: 3 GHSLGCT 9
G++LGCT
Sbjct: 171 GYALGCT 177


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VVGHSLGCT 9
+VG ++GC+
Sbjct: 92 IVGEAIGCS 100


>sp|DPHB_SULTO|DIPHTHINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVGHSLGC 8
+VG LGC
Sbjct: 202 IVGQRLGC 209


>sp|ILVC_HALWD|KETOL-ACID reductoisomerase (NADP(+))|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GHSLGCT 9
H++GCT
Sbjct: 192 AHAIGCT 198


>sp|DPHB_METS5|DIPHTHINE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VVGHSLGC 8
V+G LGC
Sbjct: 203 VIGERLGC 210


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 HSLGCTW 10
S+GC W
Sbjct: 336 QSVGCCW 342


>sp|HTPX1_SULTO|PROTEASE HtpX homolog 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VVGHSLG 7
V+GH LG
Sbjct: 134 VIGHELG 140


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VVGHSLGC 8
++ H LGC
Sbjct: 62 IMSHKLGC 69


>sp|HMDH_AERPE|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VVGHSLGCTW 10
VV S+G TW
Sbjct: 319 VVESSMGYTW 328


>sp|GATA_METMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina mazei (strain ATCC

Query: 5 SLGCTW 10
SLG TW
Sbjct: 279 SLGATW 284


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VGHSLGCTW 10
+GH L TW
Sbjct: 51 LGHVLSHTW 59


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VGHSLGCTW 10
+GH L TW
Sbjct: 51 LGHVLSHTW 59


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VGHSLGCTW 10
+GH L TW
Sbjct: 51 LGHVLSHTW 59


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 VGHSLGCTW 10
+GH L TW
Sbjct: 51 LGHVLSHTW 59


>sp|THIOL_METJA|ACETYL-COA acetyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GHSLGCT 9
GH+LG T
Sbjct: 335 GHALGAT 341


>sp|THIOL_METTL|ACETYL-COA acetyltransferase|Methanothermococcus thermolithotrophicus

Query: 3 GHSLGCT 9
GH+LG T
Sbjct: 335 GHALGAT 341




43|Sequence|211|220|LGCTWHSLRN

>sp|BLH_HALSA|PROBABLE beta-carotene 15,15'-dioxygenase Blh|Halobacterium salinarum

Query: 3 CTWHSLRN 10
C WHS+R+
Sbjct: 250 CVWHSVRH 257


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 2 GCTWHSLR 9
GC W LR
Sbjct: 71 GCLWQGLR 78


>sp|AROE_METBU|SHIKIMATE dehydrogenase (NADP(+))|Methanococcoides burtonii (strain DSM

Query: 1 LGCTWHSLR 9
+ CT+H+ R
Sbjct: 30 MDCTYHAFR 38


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LGCTWHSLRN 10
+G W LRN
Sbjct: 449 IGSDWRDLRN 458


>sp|ARLMC_PYRAB|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus abyssi

Query: 2 GCTWHSLR 9
GC W L+
Sbjct: 69 GCLWQGLK 76


>sp|SYY_SULAC|TYROSINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LGCTWHSLRN 10
L TWH++ N
Sbjct: 69 LVATWHAMIN 78


>sp|FENR_SULTO|FERREDOXIN--NADP reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 TWHSLR 9
TWH L+
Sbjct: 204 TWHELK 209


>sp|FENR_METS5|FERREDOXIN--NADP reductase|Metallosphaera sedula (strain ATCC 51363

Query: 4 TWHSLR 9
TWH L+
Sbjct: 204 TWHELK 209


>sp|FENR2_SULAC|FERREDOXIN--NADP reductase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 TWHSLR 9
TWH L+
Sbjct: 204 TWHELK 209


>sp|FENR1_SULAC|FERREDOXIN--NADP reductase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 TWHSLR 9
TWH L+
Sbjct: 199 TWHELK 204




44|Sequence|216|225|HSLRNSPGEK

>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus

Query: 2 SLRNSPGEK 10
S+R++PGEK
Sbjct: 77 SIRDTPGEK 85


>sp|CARB_METLZ|CARBAMOYL phosphate synthase large chain|Methanocorpusculum labreanum (strain

Query: 1 HSLRNSPGEK 10
H L N+PG+K
Sbjct: 992 HLLINTPGDK 1001


>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HSLRNSPGEK 10
++ RNSPG +
Sbjct: 143 YTHRNSPGSR 152


>sp|HPRT_METTM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter marburgensis

Query: 2 SLRNSP 7
SLRNSP
Sbjct: 8 SLRNSP 13


>sp|HPRT_METTH|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 SLRNSP 7
SLRNSP
Sbjct: 8 SLRNSP 13


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 HSLRNSPGEK 10
HSL PG+K
Sbjct: 164 HSLGGVPGDK 173


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 HSLRNSPGE 9
HS++ SP E
Sbjct: 577 HSIKESPEE 585




45|Sequence|221|230|SPGEKINLLK

>sp|SYA_METMA|ALANINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PGEKINLLK 10
PGEKI ++K
Sbjct: 698 PGEKIRIVK 706


>sp|SYA_METAC|ALANINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PGEKINLLK 10
PGEKI ++K
Sbjct: 698 PGEKIRIVK 706


>sp|SYA_METBF|ALANINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGEKINLLK 10
PGEKI ++K
Sbjct: 698 PGEKIRVVK 706


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 2 PGEKINLLK 10
PGEKI++++
Sbjct: 212 PGEKIDIMQ 220


>sp|RRP4_PICTO|EXOSOME complex component Rrp4|Picrophilus torridus (strain ATCC 700027

Query: 2 PGEKINL 8
PGEKI+L
Sbjct: 9 PGEKIDL 15


>sp|PSA_SULAC|PROTEASOME subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PGEKIN 7
PGEK+N
Sbjct: 206 PGEKLN 211


>sp|Y2001_METTM|UNCHARACTERIZED protein MTBMA_p00010|Methanothermobacter marburgensis (strain ATCC

Query: 1 SPGEKINLLK 10
S GEK+ LLK
Sbjct: 756 SAGEKMELLK 765


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain ATCC

Query: 1 SPGEKINL 8
SPG +IN+
Sbjct: 263 SPGNRINV 270


>sp|Y688_PYRIL|UPF0179 protein Pisl_0688|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PGEKINLLK 10
PGEKI +++
Sbjct: 111 PGEKIKIIR 119


>sp|ASSY_SULAC|ARGININOSUCCINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GEKINLLK 10
GEK++LLK
Sbjct: 225 GEKMDLLK 232


>sp|AGLUS_ARCFU|ARCHAEAL glutamate synthase [NADPH]|Archaeoglobus fulgidus (strain ATCC

Query: 2 PGEKINL 8
PGEK+ L
Sbjct: 265 PGEKVTL 271


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 PGEKINLL 9
PGEK+ LL
Sbjct: 13 PGEKVLLL 20


>sp|COFC_METMP|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 SPGEKINLLK 10
S GE+I L+K
Sbjct: 23 SSGERIELIK 32


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 1 SPGEKINLLK 10
PGE + +LK
Sbjct: 437 DPGETVKILK 446


>sp|GLPK2_SACS2|GLYCEROL kinase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 GEKINLLK 10
G KIN+LK
Sbjct: 396 GTKINILK 403


>sp|ATRMA_PYRHO|TRNA (uracil(54)-C(5))-methyltransferase|Pyrococcus horikoshii (strain

Query: 1 SPGEKINLLK 10
+PG+++ +LK
Sbjct: 25 APGDEVEILK 34




46|Sequence|226|235|INLLKRSLLS

>sp|DCUP_PICTO|UROPORPHYRINOGEN decarboxylase|Picrophilus torridus (strain ATCC 700027

Query: 1 INLLKRSLLS 10
+NL KRS+LS
Sbjct: 155 LNLTKRSMLS 164




47|Sequence|231|240|RSLLSIPNTD

>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 1 RSLLSIPN 8
R LSIPN
Sbjct: 149 REFLSIPN 156


>sp|HDRE_METBF|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina barkeri (strain

Query: 1 RSLLSIPN 8
R LSIPN
Sbjct: 148 RDFLSIPN 155


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 RSLLSIPN 8
R LLS+PN
Sbjct: 100 RILLSLPN 107




48|Sequence|236|245|IPNTDYIQLL

>sp|Y862_METTH|UNCHARACTERIZED protein MTH_862|Methanothermobacter thermautotrophicus (strain

Query: 1 IPNTDY 6
IPNTD+
Sbjct: 55 IPNTDF 60


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 1 IPNTDYIQLL 10
+P D++QLL
Sbjct: 121 LPYEDFVQLL 130


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PNTDY 6
PNTDY
Sbjct: 315 PNTDY 319


>sp|THSB_ARCFU|THERMOSOME subunit beta|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NTDYIQL 9
NTDYI++
Sbjct: 196 NTDYIKI 202


>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IPNTDYIQL 9
IPN+D+I L
Sbjct: 183 IPNSDHIIL 191


>sp|Y1567_ARCFU|UNCHARACTERIZED protein AF_1567|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PNTDYIQLL 10
PNT Y+++L
Sbjct: 133 PNTGYLRIL 141


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 PNTDYIQ 8
PN DY++
Sbjct: 237 PNVDYVK 243


>sp|DNAG_HYPBU|DNA primase DnaG|Hyperthermus butylicus (strain DSM 5456

Query: 1 IPNTDYIQLL 10
IP +Y+Q+L
Sbjct: 261 IPAREYLQIL 270


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IPNTDYIQLL 10
+P+T YI L+
Sbjct: 617 VPSTSYIALV 626


>sp|THPR_METJA|RNA 2',3'-cyclic phosphodiesterase|Methanocaldococcus jannaschii

Query: 2 PNTDYIQLL 10
PN++YI+++
Sbjct: 76 PNSNYIRVI 84




49|Sequence|241|250|YIQLLSEIAK

>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YIQLLSEIAK 10
YI+LLS+IAK
Sbjct: 336 YIRLLSQIAK 345


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YIQLLSEIAK 10
YI+LLS+I K
Sbjct: 336 YIRLLSQIGK 345


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YIQLLSEIAK 10
YI+LLS+I K
Sbjct: 336 YIRLLSQIGK 345


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 1 YIQLLSEIAK 10
Y+QL+SE+ K
Sbjct: 1042 YLQLISEVQK 1051


>sp|METK_METB6|S-ADENOSYLMETHIONINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 YIQLLSEIAK 10
Y++LLS+I K
Sbjct: 338 YVRLLSQIGK 347


>sp|DEOC_THEVO|DEOXYRIBOSE-PHOSPHATE aldolase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IQLLSEIAK 10
++L+SEIAK
Sbjct: 183 VKLMSEIAK 191


>sp|METK_HYPBU|S-ADENOSYLMETHIONINE synthase|Hyperthermus butylicus (strain DSM 5456

Query: 1 YIQLLSEIAK 10
Y++LLS+I +
Sbjct: 345 YVKLLSQIGR 354


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 4 LLSEIAK 10
LLSEIAK
Sbjct: 266 LLSEIAK 272




50|Sequence|246|255|SEIAKEQGFN

>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 1 SEIAKEQGFN 10
+EIA+E GFN
Sbjct: 300 AEIARELGFN 309


>sp|ISF_METTE|IRON-SULFUR flavoprotein|Methanosarcina thermophila

Query: 2 EIAKEQGF 9
E+AKE+GF
Sbjct: 25 EVAKERGF 32


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM

Query: 1 SEIAKEQGF 9
SEIAKE+G
Sbjct: 86 SEIAKEKGL 94


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 1 SEIAKEQGFN 10
SEI KE G N
Sbjct: 76 SEIFKESGIN 85


>sp|SPSS_METMJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 EIAKEQGFN 10
EIA+E G N
Sbjct: 382 EIARENGLN 390


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SEIAKEQGFN 10
SE+AKE G N
Sbjct: 172 SEMAKEVGLN 181


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 SEIAKEQGF 9
++IAKE GF
Sbjct: 21 ADIAKEYGF 29


>sp|LIPA_AERPE|LIPOYL synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 EIAKEQG 8
EIAKE+G
Sbjct: 183 EIAKEEG 189


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 SEIAKEQG 8
SEIAKE G
Sbjct: 451 SEIAKEMG 458


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IAKEQGFN 10
+AK+ GFN
Sbjct: 239 VAKQHGFN 246


>sp|ILVC_CALMQ|KETOL-ACID reductoisomerase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 2 EIAKEQGF 9
++AKE+GF
Sbjct: 54 DLAKEEGF 61


>sp|FTSZ2_HALSA|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 SEIAKEQG 8
S+IAKEQG
Sbjct: 137 SKIAKEQG 144


>sp|FTSZ2_HALS3|CELL division protein FtsZ 2|Halobacterium salinarum (strain ATCC 29341

Query: 1 SEIAKEQG 8
S+IAKEQG
Sbjct: 137 SKIAKEQG 144


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EIAKEQGF 9
EIA+E GF
Sbjct: 451 EIAEESGF 458


>sp|RFCS_THEVO|REPLICATION factor C small subunit|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SEIAKEQGFN 10
+EIAK +GF
Sbjct: 169 NEIAKNEGFT 178


>sp|TREH2_SULAC|TREHALASE 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SEIAKEQGFN 10
S++AK+ G+N
Sbjct: 405 SKLAKDLGYN 414


>sp|PYRC_SULTO|DIHYDROOROTASE tokodaii (strain DSM 16993

Query: 2 EIAKEQGFN 10
+IAKE GF+
Sbjct: 200 KIAKELGFS 208


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 1 SEIAKEQG 8
SEI KE+G
Sbjct: 77 SEILKEEG 84


>sp|Y2354_ARCFU|UNCHARACTERIZED protein AF_2354|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EIAKEQGFN 10
E AKE GFN
Sbjct: 57 EKAKELGFN 65


>sp|RFCS_THEAC|REPLICATION factor C small subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EIAKEQGF 9
EIAK +GF
Sbjct: 170 EIAKNEGF 177


>sp|G3P_METBU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcoides burtonii (strain DSM 6242

Query: 3 IAKEQGFN 10
+AK++GFN
Sbjct: 44 MAKDKGFN 51


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EIAKEQGF 9
+IAKE GF
Sbjct: 216 KIAKETGF 223


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EIAKEQGF 9
+IAKE GF
Sbjct: 216 KIAKETGF 223


>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EIAKEQGFN 10
EIAKE+G +
Sbjct: 407 EIAKERGIS 415


>sp|RL30_NANEQ|LARGE ribosomal subunit protein uL30|Nanoarchaeum equitans (strain

Query: 2 EIAKEQGFN 10
E KE+GFN
Sbjct: 83 EYIKEKGFN 91


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SEIAKEQGF 9
+E+AK+ GF
Sbjct: 252 TEVAKKHGF 260


>sp|KADA_METKA|ADENYLATE kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 EIAKEQGF 9
EIAKE+G
Sbjct: 40 EIAKEEGL 47


>sp|THIO_ARCFU|PROBABLE Thioredoxin|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SEIAKEQG 8
S++AKE+G
Sbjct: 23 SKVAKEEG 30




51|Sequence|251|260|EQGFNITYLD

>sp|ISCS_METTE|CYSTEINE desulfurase IscS|Methanosarcina thermophila

Query: 2 QGFNITYL 9
QGF +TYL
Sbjct: 127 QGFEVTYL 134


>sp|CPGS_THEON|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus onnurineus (strain

Query: 1 EQGFNITYLD 10
EQG + YLD
Sbjct: 396 EQGIEVIYLD 405


>sp|SYP_THEPD|PROLINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 QGFNITYLD 10
+ FN+T+LD
Sbjct: 239 KAFNVTFLD 247


>sp|GSA_METS3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 EQGFNIT 7
EQG+NIT
Sbjct: 334 EQGYNIT 340


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EQGFNITYL 9
EQGFN+ L
Sbjct: 419 EQGFNVKLL 427


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 FNITYLD 10
FNITY D
Sbjct: 443 FNITYTD 449


>sp|IF2P_SULAC|PROBABLE translation initiation factor IF-2|Sulfolobus acidocaldarius

Query: 1 EQGFNITYLD 10
EQGFN D
Sbjct: 180 EQGFNAERFD 189


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 1 EQGFNITYLD 10
E+G + YLD
Sbjct: 396 ERGIEVIYLD 405


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 EQGFNITYLD 10
E+G + YLD
Sbjct: 397 ERGIEVIYLD 406


>sp|NURA_SULTO|DNA double-strand break repair nuclease|Sulfurisphaera tokodaii

Query: 2 QGFNITYLD 10
+GFN+T +D
Sbjct: 80 EGFNVTPID 88


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EQGFNITYL 9
E+G N+ YL
Sbjct: 126 ERGHNVVYL 134


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 1 EQGFNITYL 9
E+G N+ YL
Sbjct: 126 ERGHNVVYL 134


>sp|RS3_NANEQ|SMALL ribosomal subunit protein uS3|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 EQGFNITYL 9
++ FNI YL
Sbjct: 163 DRAFNIAYL 171


>sp|RS9_SULAC|SMALL ribosomal subunit protein uS9|Sulfolobus acidocaldarius (strain

Query: 1 EQGFNITY 8
EQ F ITY
Sbjct: 5 EQNFMITY 12


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 QGFNITYLD 10
+ F+ITY D
Sbjct: 242 EAFDITYAD 250


>sp|RADB_METM5|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 EQGFNITYLD 10
E G N+ Y+D
Sbjct: 39 ENGKNVVYID 48


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 QGFNITYL 9
+ FNI+YL
Sbjct: 1032 ENFNISYL 1039


>sp|RADB_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 EQGFNITYLD 10
E G N+ Y+D
Sbjct: 39 ENGKNVVYID 48


>sp|RADB_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 1 EQGFNITYLD 10
E G N+ Y+D
Sbjct: 39 ENGKNVVYID 48


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 QGFNITYLD 10
+GF + Y+D
Sbjct: 532 RGFKVLYID 540


>sp|KTHY_STAMF|PROBABLE thymidylate kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 EQGFNITY 8
E+GFN+ Y
Sbjct: 32 EKGFNVHY 39


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 QGFNITYLD 10
+GF + Y+D
Sbjct: 992 RGFKVLYID 1000




52|Sequence|256|265|ITYLDIDELS

>sp|SYP_PYRIL|PROLINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 ITYLDID 7
+TYLDID
Sbjct: 247 VTYLDID 253


>sp|SYP_HALWD|PROLINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ITYLDIDELS 10
ITY D DE S
Sbjct: 248 ITYTDTDETS 257


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ITYLDIDEL 9
I++LDID+L
Sbjct: 396 ISFLDIDKL 404


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 3 YLDIDELS 10
+LDIDE++
Sbjct: 79 FLDIDEIA 86


>sp|LYSJ_SULTO|[LYSW]-AMINOADIPATE semialdehyde/glutamate semialdehyde transaminase|Sulfurisphaera

Query: 1 ITYLDIDEL 9
+TY +IDEL
Sbjct: 153 LTYNNIDEL 161


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 YLDIDEL 9
YLDIDE+
Sbjct: 308 YLDIDEI 314


>sp|Y1085_METJA|UNCHARACTERIZED protein MJ1085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITYLDIDEL 9
I Y+D+DE+
Sbjct: 18 IKYIDVDEI 26


>sp|Y215_NITMS|MEMO1 family protein Nmar_0215|Nitrosopumilus maritimus (strain SCM1)

Query: 3 YLDIDELS 10
Y++IDE S
Sbjct: 120 YIEIDEFS 127


>sp|SYP_HALMA|PROLINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ITYLDIDE 8
ITY D DE
Sbjct: 246 ITYADADE 253


>sp|DHE2_HALSI|NAD-SPECIFIC glutamate dehydrogenase A|Halobacterium salinarum (Halobacterium

Query: 2 TYLDIDE 8
+YLDID+
Sbjct: 40 SYLDIDQ 46


>sp|SYP_PYRNV|PROLINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ITYLDID 7
+TYLD D
Sbjct: 246 VTYLDAD 252


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 1 ITYLDIDEL 9
I++LD+D+L
Sbjct: 396 ISFLDLDKL 404


>sp|SYP_PYRAE|PROLINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITYLDID 7
+TYLD D
Sbjct: 247 VTYLDAD 253




53|Sequence|261|270|IDELSANGQY

>sp|SYE_SULAC|GLUTAMATE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IDELSANGQ 9
+DE SA+GQ
Sbjct: 551 VDEKSADGQ 559


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IDELSANGQ 9
++EL+ANG+
Sbjct: 396 VEELNANGK 404


>sp|NADK_NATPD|NAD kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DELSANG 8
DEL ANG
Sbjct: 37 DELDANG 43


>sp|Y078_METKA|UPF0285 protein MK0078|Methanopyrus kandleri (strain AV19 /

Query: 3 ELSANGQY 10
ELSANG +
Sbjct: 208 ELSANGAF 215


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 IDELSANGQY 10
IDE+ G+Y
Sbjct: 60 IDEMEEGGRY 69




54|Sequence|266|275|ANGQYQCLAE

>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 2 NGQYQCL 8
+GQY+CL
Sbjct: 202 SGQYRCL 208


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 1 ANGQYQCLAE 10
A+G + CL E
Sbjct: 79 ADGSFSCLVE 88




55|Sequence|271|280|QCLAELSTSP

>sp|NNR_METHJ|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanospirillum hungatei JF-1

Query: 3 LAELSTSP 10
LAE+ST P
Sbjct: 211 LAEISTGP 218




56|Sequence|276|285|LSTSPITVCH

>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 5 PITVCH 10
P TVCH
Sbjct: 200 PCTVCH 205




57|Sequence|281|290|ITVCHGSGIS

>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 2 TVCHGSG 8
TVCHG+G
Sbjct: 202 TVCHGTG 208


Query: 4 CHGSG 8
CHGSG
Sbjct: 164 CHGSG 168


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 3 VCHGSGIS 10
+CH SGIS
Sbjct: 459 ICHDSGIS 466


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TVCHGSG 8
+ CHGSG
Sbjct: 402 STCHGSG 408


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TVCHGSGI 9
TV HGSG+
Sbjct: 207 TVVHGSGL 214


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 3 VCHGSGIS 10
+CHG+ +S
Sbjct: 249 ICHGANLS 256


>sp|DEGLY_PYRFU|DEGLYCASE PfpI|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TVCHGSGI 9
T+CHG I
Sbjct: 98 TICHGPQI 105


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TVCHGSG 8
+ CHG+G
Sbjct: 791 STCHGAG 797


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TVCHGSG 8
+ CHG+G
Sbjct: 890 STCHGAG 896


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 TVCHGSG 8
+ CHG+G
Sbjct: 836 STCHGAG 842


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 2 TVCHGSG 8
+ CHG+G
Sbjct: 908 STCHGAG 914


Query: 1 ITVCHGS 7
I VCHG+
Sbjct: 564 IGVCHGA 570


>sp|PIMT_METTH|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 ITVCHGSG 8
ITV HG G
Sbjct: 128 ITVIHGDG 135


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CHGSGIS 10
CH +GIS
Sbjct: 948 CHKAGIS 954


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 3 VCHGSGIS 10
+C SGIS
Sbjct: 113 ICQASGIS 120


>sp|TFRB_METTM|FUMARATE reductase (CoM/CoB) subunit B|Methanothermobacter marburgensis

Query: 1 ITVCHGSGIS 10
ITVC G G +
Sbjct: 331 ITVCAGCGAT 340


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CHGSGIS 10
C+G+G+S
Sbjct: 1003 CYGAGVS 1009


>sp|DNAJ_METTH|CHAPERONE protein DnaJ|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 VCHGS 7
VCHGS
Sbjct: 150 VCHGS 154


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 4 CHGSG 8
CHG+G
Sbjct: 171 CHGTG 175


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 CHGSG 8
CHG+G
Sbjct: 404 CHGAG 408


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 4 CHGSG 8
CHG+G
Sbjct: 254 CHGAG 258


>sp|TRPD_PYRAR|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 VCHGSGI 9
V HGSG+
Sbjct: 217 VVHGSGV 223


>sp|TRPD_PYRAE|ANTHRANILATE phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 VCHGSGI 9
V HGSG+
Sbjct: 217 VVHGSGV 223


>sp|TRUB_METKA|PROBABLE tRNA pseudouridine synthase B|Methanopyrus kandleri (strain AV19 /

Query: 3 VCHGSGIS 10
+CHG+ ++
Sbjct: 260 ICHGANLA 267


>sp|FOLD_PICTO|BIFUNCTIONAL protein FolD|Picrophilus torridus (strain ATCC 700027

Query: 1 ITVCHGSGIS 10
+TVCH ++
Sbjct: 178 VTVCHSRTVN 187


>sp|PANB_STAMF|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 TVCHGSG 8
T+C GSG
Sbjct: 199 TICIGSG 205


>sp|PANB_PYRNV|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 TVCHGSG 8
T+C GSG
Sbjct: 197 TICIGSG 203


>sp|PANB_PYRIL|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 TVCHGSG 8
T+C GSG
Sbjct: 197 TICIGSG 203


>sp|PANB_HYPBU|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 2 TVCHGSG 8
T+C GSG
Sbjct: 203 TICIGSG 209


>sp|PANB_AERPE|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 TVCHGSG 8
T+C GSG
Sbjct: 201 TICIGSG 207


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 3 VCHGSGI 9
+CHG+ +
Sbjct: 246 ICHGANV 252


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITVCHGSGIS 10
+TV HG +S
Sbjct: 243 VTVDHGKAVS 252


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITVCHGSGIS 10
+TV HG +S
Sbjct: 243 VTVDHGKAVS 252


>sp|Y292_METBF|UPF0179 protein Mbar_A0292|Methanosarcina barkeri (strain Fusaro /

Query: 3 VCHGSGIS 10
+CH G+S
Sbjct: 111 ICHPEGLS 118


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VCHGSGI 9
+C GSG+
Sbjct: 218 ICRGSGL 224




58|Sequence|286|295|GSGISCGNAQ

>sp|TSGCD_HALVD|PUTATIVE glucose ABC transporter permease|Haloferax volcanii (strain ATCC

Query: 1 GSGISCGNA 9
G GI+CG A
Sbjct: 64 GVGIACGMA 72


>sp|KPRS_AERPE|RIBOSE-PHOSPHATE pyrophosphokinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 SGISCGN 8
+GISCG+
Sbjct: 161 TGISCGD 167


>sp|RAD50_METMA|DNA double-strand break repair Rad50|Methanosarcina mazei (strain ATCC

Query: 1 GSGISC 6
GSGI+C
Sbjct: 564 GSGIAC 569




59|Sequence|291|300|CGNAQSDAAH

>sp|RNP4_METTH|RIBONUCLEASE P protein component 4|Methanothermobacter thermautotrophicus

Query: 1 CGNAQSD 7
CG +QSD
Sbjct: 133 CGESQSD 139




60|Sequence|296|305|SDAAHNALQY

>sp|KITH_THEKO|THYMIDINE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 AHNALQY 10
AHN L+Y
Sbjct: 57 AHNGLRY 63


>sp|CAPPA_METMA|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SDAAHNALQY 10
++A H AL+Y
Sbjct: 102 AEANHGALEY 111


>sp|CAPPA_METAC|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SDAAHNALQY 10
++A H AL+Y
Sbjct: 102 AEANHGALEY 111


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SDAAHNALQY 10
++ HNAL Y
Sbjct: 192 NEVVHNALSY 201


>sp|CAPPA_METBF|PHOSPHOENOLPYRUVATE carboxylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 SDAAHNALQY 10
++A +NAL+Y
Sbjct: 102 AEANYNALEY 111




61|Sequence|301|313|NALQYLKIIAERK

>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 4 QYLKIIAERK 13
++LK+IAERK
Sbjct: 299 EFLKVIAERK 308


>sp|AROB_SULAC|3-DEHYDROQUINATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NALQYLKIIAERK 13
NAL YL+ I +K
Sbjct: 21 NALSYLREIQNKK 33


>sp|Y453_METS3|PUTATIVE HTH-type transcriptional regulatory protein|Methanobrevibacter

Query: 1 NALQYLKIIAERK 13
N + LKII ERK
Sbjct: 298 NPSELLKIIRERK 310


>sp|GUAAA_METS3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanobrevibacter

Query: 2 ALQYLKIIAE 11
+LQYLKI E
Sbjct: 19 SLQYLKIPTE 28


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NALQYLKIIA 10
NAL Y +IIA
Sbjct: 551 NALSYARIIA 560


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 5 YLKIIAER 12
YLKII ER
Sbjct: 488 YLKIINER 495


>sp|XPD_SULAC|ATP-DEPENDENT DNA helicase XPD|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 QYLKIIAER 12
YLKI+A+R
Sbjct: 478 DYLKILAQR 486


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain

Query: 2 ALQYLKIIAE 11
AL+ LKI+AE
Sbjct: 89 ALEILKILAE 98


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 1 NALQYLKIIAERK 13
N + LK+I ERK
Sbjct: 332 NMEELLKLIKERK 344


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 6 LKIIAERK 13
LKI+A+RK
Sbjct: 87 LKIVAQRK 94


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 6 LKIIAERK 13
LKI+A+RK
Sbjct: 87 LKIVAQRK 94


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 6 LKIIAERK 13
LKI+A+RK
Sbjct: 87 LKIVAQRK 94


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 6 LKIIAERK 13
LKI+A+RK
Sbjct: 87 LKIVAQRK 94


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 6 LKIIAERK 13
LKI+A+RK
Sbjct: 87 LKIVAQRK 94






THE END