1|SequenceR|10|1|SSNFRVFVIM
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 NFRVFVI 9
NFR FV+
Sbjct: 466 NFRSFVL 472
2|SequenceR|15|6|VPFGHSSNFR
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 2 PFGHSSNF 9
PFGHSSN
Sbjct: 107 PFGHSSNM 114
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 VPFGHSSNFR 10
VPF +S+FR
Sbjct: 499 VPFISASDFR 508
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PFGHS 6
PFGH+
Sbjct: 1172 PFGHA 1176
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PFGHS 6
PFGHS
Sbjct: 134 PFGHS 138
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PFGHS 6
PFGHS
Sbjct: 134 PFGHS 138
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 5 HSSNFR 10
HS+N+R
Sbjct: 3062 HSTNYR 3067
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 HSSNFR 10
HS+N+R
Sbjct: 2974 HSTNYR 2979
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 PFGHSS 7
P+GH S
Sbjct: 851 PYGHQS 856
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 FGHSSNF 9
FG +SNF
Sbjct: 497 FGKTSNF 503
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 FGHSSNF 9
FG +SNF
Sbjct: 497 FGKTSNF 503
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 FGHSSNFR 10
F H NFR
Sbjct: 2110 FNHVLNFR 2117
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 FGHSSNFR 10
F H NFR
Sbjct: 2110 FNHVLNFR 2117
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 PFGHSSNF 9
P G SNF
Sbjct: 407 PVGSQSNF 414
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PFGHSSNFR 10
P GHS+ R
Sbjct: 686 PTGHSTMLR 694
3|SequenceR|20|11|DSDVEVPFGH
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 3 DVEVPFGH 10
D E+P GH
Sbjct: 393 DGEIPIGH 400
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 DVEVPFGH 10
D E+P GH
Sbjct: 402 DGEIPIGH 409
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 DVEVPFGH 10
D E+P GH
Sbjct: 402 DGEIPIGH 409
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 DSDVEVPFGH 10
+ DVE P G
Sbjct: 50 NKDVETPIGQ 59
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DVEVPFGH 10
DVE+ +GH
Sbjct: 32 DVELCYGH 39
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DVEVPF 8
DV+VPF
Sbjct: 1187 DVDVPF 1192
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 DVEVPF 8
DV+VPF
Sbjct: 1187 DVDVPF 1192
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 DVEVPFGH 10
DVE FGH
Sbjct: 700 DVEPAFGH 707
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 DVEVPFGH 10
DVE FGH
Sbjct: 700 DVEPAFGH 707
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 DSDVEVPFG 9
D DV PFG
Sbjct: 2410 DGDVINPFG 2418
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 DSDVEVPFG 9
D DV PFG
Sbjct: 2410 DGDVINPFG 2418
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 DSDVEVPFG 9
D DV PFG
Sbjct: 2410 DGDVINPFG 2418
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 DSDVEVPFG 9
D DV PFG
Sbjct: 2410 DGDVINPFG 2418
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 DSDVEVPFG 9
D DV PFG
Sbjct: 2410 DGDVINPFG 2418
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 DSDVEVPFG 9
D DV PFG
Sbjct: 2410 DGDVINPFG 2418
>sp|RP18_VACCC|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 DVEVPFG 9
DVE+P G
Sbjct: 53 DVELPLG 59
>sp|RP18_VARV|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus
Query: 3 DVEVPFG 9
DVE+P G
Sbjct: 53 DVELPLG 59
>sp|RP18_VAR67|DNA-DIRECTED RNA polymerase 18 kDa|Variola virus (isolate
Query: 3 DVEVPFG 9
DVE+P G
Sbjct: 53 DVELPLG 59
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 EVPFG 9
EVPFG
Sbjct: 3228 EVPFG 3232
>sp|RP18_VACCA|DNA-DIRECTED RNA polymerase 18 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 DVEVPFG 9
DVE+P G
Sbjct: 53 DVELPLG 59
>sp|RP18_MONPV|DNA-DIRECTED RNA polymerase 18 kDa|Monkeypox virus (MPXV)
Query: 3 DVEVPFG 9
DVE+P G
Sbjct: 53 DVELPLG 59
>sp|SPI1_VACCC|SERINE proteinase inhibitor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DSDVEVPF 8
D DV++P+
Sbjct: 59 DMDVDIPY 66
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 SDVEVPFGH 10
SDV++ F H
Sbjct: 180 SDVKICFSH 188
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 SDVEVPFGH 10
SDV++ F H
Sbjct: 180 SDVKICFSH 188
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 DVEVPFG 9
+VE PFG
Sbjct: 661 EVEPPFG 667
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 DVEVPFG 9
+VE PFG
Sbjct: 662 EVEPPFG 668
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 DVEVPFG 9
+VE PFG
Sbjct: 660 EVEPPFG 666
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 DSDVEVPF 8
D D E+PF
Sbjct: 422 DDDNEIPF 429
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 VEVPFGH 10
VE P GH
Sbjct: 543 VETPRGH 549
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 VEVPFGH 10
VE P GH
Sbjct: 543 VETPRGH 549
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 3 DVEVPFGH 10
+VE PF H
Sbjct: 144 EVEKPFFH 151
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 4 VEVPFGH 10
VE P GH
Sbjct: 536 VETPRGH 542
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 SDVEVPFGH 10
SDV V GH
Sbjct: 82 SDVNVDNGH 90
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 SDVEVPFG 9
+DVE+P G
Sbjct: 554 ADVELPGG 561
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 SDVEVPFG 9
+DVE+P G
Sbjct: 554 ADVELPGG 561
>sp|A52_VACCC|PROTEIN A52|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DSDVEVPFG 9
D+D E FG
Sbjct: 87 DNDAEEQFG 95
4|SequenceR|25|16|QFISTDSDVE
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 FISTDSDV 9
F+S DSDV
Sbjct: 6642 FLSFDSDV 6649
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 3 ISTDSDVE 10
I TD+D+E
Sbjct: 675 IETDTDIE 682
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 1 QFISTDSDVE 10
+FIS ++DV+
Sbjct: 384 KFISINADVK 393
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 QFISTDSDV 9
QF++TD V
Sbjct: 335 QFLTTDDGV 343
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 QFISTDSDV 9
QF++TD V
Sbjct: 335 QFLTTDDGV 343
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 QFISTDSDV 9
QF++TD V
Sbjct: 335 QFLTTDDGV 343
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 QFISTDSDV 9
QF++TD V
Sbjct: 335 QFLTTDDGV 343
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 QFISTDSDV 9
QF++TD V
Sbjct: 335 QFLTTDDGV 343
5|SequenceR|30|21|VVEKLQFIST
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 VVEKLQFIS 9
VV+KL+F S
Sbjct: 908 VVDKLEFTS 916
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 VVEKLQFIS 9
VV+KL+F S
Sbjct: 909 VVDKLEFTS 917
6|SequenceR|35|26|GQRKAVVEKL
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 QRKAVVEKL 10
QRKAVV L
Sbjct: 1301 QRKAVVSTL 1309
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 QRKAVVEK 9
+RKAVV K
Sbjct: 149 KRKAVVSK 156
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 3 RKAVVEKL 10
RKA+ +KL
Sbjct: 933 RKAITQKL 940
7|SequenceR|40|31|QDAPVGQRKA
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 QDAPVGQRK 9
Q AP+GQ K
Sbjct: 838 QSAPIGQGK 846
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 DAPVGQRK 9
D P+GQ K
Sbjct: 581 DGPLGQEK 588
>sp|YVFD_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QDAPVGQRKA 10
Q AP+ +RK+
Sbjct: 11 QKAPIYKRKS 20
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 1 QDAPVGQ 7
QDAP G+
Sbjct: 746 QDAPAGR 752
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 QDAPVGQ 7
QDAP G+
Sbjct: 746 QDAPAGR 752
>sp|VE7_HPV35|PROTEIN E7|Human papillomavirus 35
Query: 2 DAPVGQRK 9
D P GQ K
Sbjct: 40 DGPAGQAK 47
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 3 APVGQRKA 10
APV +RKA
Sbjct: 232 APVPERKA 239
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 1 QDAPVGQ 7
QD PV Q
Sbjct: 143 QDTPVAQ 149
8|SequenceR|45|36|FIVRLQDAPV
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 FIVRLQDAPV 10
+ + LQD+P+
Sbjct: 327 WTIYLQDSPI 336
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 FIVRLQDAPV 10
+ + LQD+P+
Sbjct: 327 WTIYLQDSPI 336
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 3 VRLQDA 8
VRLQDA
Sbjct: 96 VRLQDA 101
9|SequenceR|50|41|LEKGAFIVRL
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LEKGAFIVR 9
LEKG I+R
Sbjct: 7050 LEKGRLIIR 7058
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 KGAFIVRL 10
+GAFI+R+
Sbjct: 397 RGAFILRI 404
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 KGAFIVR 9
+GAF+VR
Sbjct: 1540 RGAFLVR 1546
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 KGAFIVR 9
+GAF+VR
Sbjct: 1540 RGAFLVR 1546
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 KGAFIVR 9
+GAF+VR
Sbjct: 1540 RGAFLVR 1546
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 KGAFIVR 9
+GAF+VR
Sbjct: 1540 RGAFLVR 1546
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 KGAFIVR 9
+GAF+VR
Sbjct: 1540 RGAFLVR 1546
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 LEKGAFI 7
LE+GA++
Sbjct: 1653 LERGAYV 1659
10|SequenceR|55|46|TWDNRLEKGA
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 TWDNRLEKGA 10
T+D++LE GA
Sbjct: 194 TYDSKLEFGA 203
>sp|MATRX_PI3H4|MATRIX protein|Human parainfluenza 3 virus (strain
Query: 2 WDNRLEKG 9
W +RL KG
Sbjct: 141 WSSRLRKG 148
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 2 WDNRLEKGA 10
W RL +GA
Sbjct: 86 WSKRLGRGA 94
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 WDNRL 6
WDNR+
Sbjct: 1082 WDNRV 1086
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TWDNRLEK 8
TW+NR+ +
Sbjct: 459 TWENRVRE 466
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TWDNRLEK 8
TW+NR+ +
Sbjct: 459 TWENRVRE 466
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 2 WDNRLE 7
W NRL+
Sbjct: 492 WQNRLQ 497
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 WDNRL 6
WDN+L
Sbjct: 334 WDNQL 338
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 WDNRL 6
WDN+L
Sbjct: 334 WDNQL 338
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 TWDNRLEKG 9
TWD +E+G
Sbjct: 83 TWDLFVERG 91
11|SequenceR|60|51|DCNQVTWDNR
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CNQVTWDNR 10
CN V W++R
Sbjct: 168 CNGVAWEHR 176
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CNQVTWDNR 10
CN V W++R
Sbjct: 168 CNGVAWEHR 176
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 NQVTWDN 9
N+VTW+N
Sbjct: 2096 NEVTWEN 2102
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 NQVTWDN 9
N+VTW+N
Sbjct: 2096 NEVTWEN 2102
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 NQVTWDN 9
N+VTW+N
Sbjct: 2096 NEVTWEN 2102
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 DC-NQVTWDN 9
DC N+VTW N
Sbjct: 2082 DCFNEVTWAN 2091
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2097 NEVTWTN 2103
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CNQVTWDN 9
CN TW+N
Sbjct: 974 CNIGTWEN 981
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2096 NEVTWTN 2102
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2086 NEVTWTN 2092
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2088 NEVTWTN 2094
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2088 NEVTWTN 2094
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2088 NEVTWTN 2094
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2098 NEVTWTN 2104
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2096 NEVTWTN 2102
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2090 NEVTWTN 2096
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2104 NEVTWTN 2110
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2099 NEVTWTN 2105
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2087 NEVTWTN 2093
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2087 NEVTWTN 2093
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2106 NEVTWTN 2112
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 NQVTWDN 9
N+VTW N
Sbjct: 2094 NEVTWTN 2100
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 CNQVTWDNR 10
C Q TW+++
Sbjct: 24 CYQATWESQ 32
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CNQVTWDN 9
CN++ W N
Sbjct: 58 CNKIEWIN 65
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 2 CNQVTWDN 9
CN++ W N
Sbjct: 58 CNKIEWIN 65
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 3 NQVTWD 8
+Q+TWD
Sbjct: 52 HQITWD 57
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 3 NQVTWD 8
+Q+TWD
Sbjct: 52 HQITWD 57
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 NQVTWD 8
+Q+TWD
Sbjct: 52 HQITWD 57
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 NQVTWD 8
+Q+TWD
Sbjct: 52 HQITWD 57
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 3 NQVTWD 8
+Q+TWD
Sbjct: 52 HQITWD 57
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 NQVTWDN 9
N+V W+N
Sbjct: 2096 NEVNWEN 2102
>sp|UL58_HCMVA|UNCHARACTERIZED protein UL58|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DCNQVTW 7
D N+VTW
Sbjct: 64 DTNRVTW 70
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 DCNQVTWDN 9
+ +VTWD+
Sbjct: 1658 ETGEVTWDD 1666
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 DCNQVTWDN 9
+ +VTWD+
Sbjct: 1658 ETGEVTWDD 1666
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 CNQVTWDNR 10
CN T+D R
Sbjct: 499 CNLCTFDTR 507
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 CNQVTWDNR 10
CN T+D R
Sbjct: 499 CNLCTFDTR 507
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 CNQVTWDNR 10
CN T+D R
Sbjct: 499 CNLCTFDTR 507
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 TWDNR 10
TW+NR
Sbjct: 459 TWENR 463
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 TWDNR 10
TW+NR
Sbjct: 459 TWENR 463
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 3 NQVTWD 8
+Q+TWD
Sbjct: 52 HQLTWD 57
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CNQVTWD 8
CN + W+
Sbjct: 6186 CNNINWN 6192
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 CNQVTWD 8
CNQ W+
Sbjct: 2096 CNQEYWE 2102
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 3 NQVTWDNR 10
N + WDN+
Sbjct: 330 NGICWDNQ 337
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CNQVTW 7
C++V+W
Sbjct: 326 CDEVSW 331
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 3 NQVTWDNR 10
N + WDN+
Sbjct: 330 NGICWDNQ 337
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 DCNQVTWDN 9
D N+ T+DN
Sbjct: 487 DANKETYDN 495
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 DCNQVTWDN 9
D N+ T+DN
Sbjct: 487 DANKETYDN 495
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 2 CNQVTWD 8
CN V W+
Sbjct: 103 CNGVIWE 109
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CNQVTWD 8
CN V W+
Sbjct: 103 CNGVIWE 109
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CNQVTWD 8
CN V W+
Sbjct: 103 CNGVIWE 109
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 2 CNQVTWD 8
CN V W+
Sbjct: 103 CNGVIWE 109
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 CNQVTWD 8
CN V W+
Sbjct: 103 CNGVIWE 109
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 2 CNQVTWD 8
CN V W+
Sbjct: 103 CNGVIWE 109
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 DCNQVTWDNR 10
DC Q+ D R
Sbjct: 386 DCPQLKTDTR 395
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CNQVTW 7
C++V+W
Sbjct: 326 CDEVSW 331
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 DCNQVTWDNR 10
DC Q+ D R
Sbjct: 386 DCPQLKTDTR 395
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CNQVTWD 8
CN WD
Sbjct: 2119 CNDEYWD 2125
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 CNQVTWD 8
CN WD
Sbjct: 2099 CNDEYWD 2105
>sp|VLTF3_VARV|VIRAL late gene transcription factor|Variola virus
Query: 1 DCNQVTWDN 9
+ NQ+ W+N
Sbjct: 181 NSNQLVWEN 189
>sp|VLTF3_VAR67|VIRAL late gene transcription factor|Variola virus (isolate
Query: 1 DCNQVTWDN 9
+ NQ+ W+N
Sbjct: 181 NSNQLVWEN 189
>sp|VLTF3_VACCC|VIRAL late gene transcription factor|Vaccinia virus (strain Copenhagen)
Query: 1 DCNQVTWDN 9
+ NQ+ W+N
Sbjct: 181 NSNQLVWEN 189
>sp|VLTF3_VACCA|VIRAL late gene transcription factor|Vaccinia virus (strain Ankara)
Query: 1 DCNQVTWDN 9
+ NQ+ W+N
Sbjct: 181 NSNQLVWEN 189
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 CNQVTWD 8
CN WD
Sbjct: 2092 CNDEYWD 2098
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 6 TWDNR 10
TW NR
Sbjct: 23 TWQNR 27
>sp|VLTF3_MONPV|VIRAL late gene transcription factor|Monkeypox virus (MPXV)
Query: 1 DCNQVTWDN 9
+ NQ+ W+N
Sbjct: 181 NSNQLVWEN 189
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 240 DLNRLLWRSR 249
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 290 DLNRLLWRSR 299
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 290 DLNRLLWRSR 299
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 290 DLNRLLWRSR 299
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 290 DLNRLLWRSR 299
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 290 DLNRLLWRSR 299
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 DCNQVTWDNR 10
D N++ W +R
Sbjct: 290 DLNRLLWRSR 299
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CNQVTW 7
CN++ W
Sbjct: 58 CNRLEW 63
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CNQVTW 7
CN++ W
Sbjct: 58 CNRLEW 63
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 NQVTWDN 9
N+V W N
Sbjct: 2096 NEVNWGN 2102
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 1 DCNQVTW 7
DC + +W
Sbjct: 378 DCKEESW 384
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 DCNQVTWDNR 10
DC Q+ D R
Sbjct: 386 DCPQLKTDTR 395
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 CNQVTWD 8
CN W+
Sbjct: 175 CNSAQWE 181
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 CNQVTWD 8
C Q WD
Sbjct: 1901 CKQGDWD 1907
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 NQVTWD 8
NQ+T+D
Sbjct: 83 NQITYD 88
12|SequenceR|65|56|SQQDLDCNQV
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 165 SKYDLECAQI 174
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 SQQDLDCNQV 10
S+ DL+C QV
Sbjct: 150 SKYDLECAQV 159
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 157 SKYDLECAQI 166
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 157 SKYDLECAQI 166
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 155 SKYDLECAQI 164
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 165 SKYDLECAQI 174
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 157 SKYDLECAQI 166
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 167 SKYDLECAQI 176
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 158 SKYDLECAQI 167
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 167 SKYDLECAQI 176
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 158 SKYDLECAQI 167
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 164 SKYDLECAQI 173
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 158 SKYDLECAQI 167
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 164 SKYDLECAQI 173
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 SQQDLDCNQV 10
S+ DL+C Q+
Sbjct: 158 SKYDLECAQI 167
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 QQDLDCN 8
++DL+CN
Sbjct: 185 EKDLECN 191
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 QDLDCN 8
Q+LDCN
Sbjct: 261 QNLDCN 266
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 133 DLSCNQ 138
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 138 DLSCNQ 143
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 138 DLSCNQ 143
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 3 QDLDCNQV 10
QD++ NQV
Sbjct: 464 QDIEGNQV 471
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 QDLDCN 8
+DL+CN
Sbjct: 186 EDLECN 191
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 138 DLSCNQ 143
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 138 DLSCNQ 143
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 134 DLTCNQ 139
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 134 DLACNQ 139
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 134 DLACNQ 139
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 4 DLDCNQ 9
DL CNQ
Sbjct: 137 DLACNQ 142
13|SequenceR|70|61|VIHVISQQDL
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 1 VIHVISQQ 8
VIHV+S Q
Sbjct: 349 VIHVVSHQ 356
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 VIHVISQQD 9
V+ +IS+QD
Sbjct: 3111 VMDIISRQD 3119
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 VIHVISQQD 9
V+ +IS+QD
Sbjct: 3111 VMDIISRQD 3119
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 VIHVISQQD 9
V+ +IS+QD
Sbjct: 3107 VMDIISRQD 3115
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 3 HVISQQD 9
HV+SQ D
Sbjct: 396 HVVSQDD 402
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 3 HVISQQD 9
HV+SQ D
Sbjct: 396 HVVSQDD 402
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 3 HVISQQD 9
HV+SQ D
Sbjct: 396 HVVSQDD 402
14|SequenceR|75|66|RWPRQVIHVI
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1264 RWPVKVIH 1271
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1254 RWPVKVIH 1261
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1255 RWPVKVIH 1262
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1264 RWPVKVIH 1271
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1250 RWPVKVIH 1257
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1247 RWPVKVIH 1254
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1249 RWPVKVIH 1256
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1251 RWPVKVIH 1258
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1258 RWPVRVIH 1265
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1254 RWPVKVIH 1261
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +VIH
Sbjct: 1255 RWPVKVIH 1262
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP ++IH
Sbjct: 1249 RWPVKIIH 1256
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +V+H
Sbjct: 1251 RWPVKVVH 1258
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP ++IH
Sbjct: 1249 RWPVKIIH 1256
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +V+H
Sbjct: 1259 RWPVKVVH 1266
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP ++IH
Sbjct: 1253 RWPVKIIH 1260
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +V+H
Sbjct: 1254 RWPVKVVH 1261
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP VIH
Sbjct: 1252 RWPVTVIH 1259
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIHV 9
RWP +VIH
Sbjct: 1253 RWPVKVIHT 1261
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP +++H
Sbjct: 1255 RWPVKIVH 1262
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 RWPRQVIH 8
RW R+ IH
Sbjct: 93 RWLREAIH 100
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 WPRQVIH 8
W RQVIH
Sbjct: 1030 WDRQVIH 1036
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP ++IH
Sbjct: 1255 RWPVKMIH 1262
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1254 RWPVKTIH 1261
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1260 RWPVKTIH 1267
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIHV 9
RWP +VIH
Sbjct: 1249 RWPVRVIHT 1257
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1249 RWPVKTIH 1256
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1253 RWPVKTIH 1260
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1266 RWPVKTIH 1273
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1256 RWPVKTIH 1263
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1266 RWPVKTIH 1273
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1266 RWPVKTIH 1273
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1254 RWPVKTIH 1261
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + IH
Sbjct: 1254 RWPVKTIH 1261
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 PRQVIHVI 10
PR ++HVI
Sbjct: 20 PRSLVHVI 27
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 PRQVIH 8
P+QVIH
Sbjct: 404 PQQVIH 409
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP + +H
Sbjct: 1254 RWPVKTVH 1261
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PRQVIHV 9
PR+V+HV
Sbjct: 23 PRRVLHV 29
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP IH
Sbjct: 1258 RWPVTTIH 1265
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RWPRQVIH 8
RWP IH
Sbjct: 1254 RWPVTTIH 1261
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PRQVIHV 9
PR+V+HV
Sbjct: 23 PRRVLHV 29
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 WPRQVIH 8
WP Q++
Sbjct: 683 WPHQIVQ 689
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 WPRQVIH 8
W +QVIH
Sbjct: 1030 WDKQVIH 1036
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 WPRQVIH 8
WP Q++
Sbjct: 683 WPHQIVQ 689
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 861 PRPIIHAV 868
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 847 PRPIIHAV 854
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 847 PRPIIHAV 854
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 845 PRPIIHAV 852
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 847 PRPIIHAV 854
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 847 PRPIIHAV 854
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 862 PRPIIHAV 869
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 PRQVIHVI 10
PR +IH +
Sbjct: 862 PRPIIHAV 869
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 PRQVIHVI 10
P+Q +H+I
Sbjct: 291 PKQNVHLI 298
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 WPRQVIHV 9
WP IH+
Sbjct: 2325 WPLSKIHI 2332
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 WPRQVIH 8
WP + IH
Sbjct: 1252 WPVKAIH 1258
15|SequenceR|80|71|MEQGKRWPRQ
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 MEQGKRWPR 9
+EQG R PR
Sbjct: 269 IEQGSRIPR 277
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 1 MEQGKRWPR 9
+EQG R PR
Sbjct: 269 IEQGSRIPR 277
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 1 MEQGKRWPR 9
+EQG R PR
Sbjct: 269 IEQGSRIPR 277
>sp|VIF_HV2SB|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
M+QGKRW
Sbjct: 1 MDQGKRW 7
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
ME+GKRW
Sbjct: 1 MEEGKRW 7
>sp|VIF_HV2ST|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
ME+GKRW
Sbjct: 1 MEEGKRW 7
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 1 MEQGKRWPR 9
+EQG R PR
Sbjct: 151 IEQGSRIPR 159
>sp|VIF_HV2KR|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
ME+G+RW
Sbjct: 1 MEEGERW 7
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 MEQGKRWPRQ 10
M KR+P Q
Sbjct: 490 MPSSKRYPNQ 499
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
ME+GK W
Sbjct: 1 MEEGKNW 7
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
ME+GK W
Sbjct: 1 MEEGKNW 7
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 MEQGKRW 7
ME+GK W
Sbjct: 1 MEEGKSW 7
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 MEQGKRWPR 9
+E+GK W +
Sbjct: 2256 VEKGKNWSQ 2264
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 MEQGKRWPR 9
+E+GK W +
Sbjct: 2256 VEKGKNWSQ 2264
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 MEQGKRWPR 9
+E+GK W +
Sbjct: 2256 VEKGKNWSQ 2264
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 MEQGKRWPR 9
+E+GK W +
Sbjct: 2256 VEKGKNWSQ 2264
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 5 KRWPR 9
K WPR
Sbjct: 42 KTWPR 46
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 MEQGKRWPR 9
+E+GK W +
Sbjct: 2256 VERGKNWSQ 2264
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 QGKRW 7
+GKRW
Sbjct: 429 EGKRW 433
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 MEQGKRWPR 9
+ GK W R
Sbjct: 57 VSMGKHWSR 65
16|SequenceR|85|76|GGTANMEQGK
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 1 GGTANMEQ 8
G TANMEQ
Sbjct: 500 GMTANMEQ 507
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 1 GGTANMEQ 8
G TANMEQ
Sbjct: 500 GMTANMEQ 507
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 GGTANMEQ 8
G TANMEQ
Sbjct: 500 GMTANMEQ 507
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 1 GGTANMEQ 8
G TANMEQ
Sbjct: 500 GMTANMEQ 507
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 GGTANMEQ 8
G TANMEQ
Sbjct: 500 GMTANMEQ 507
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 1 GGTANMEQ 8
G TANMEQ
Sbjct: 500 GMTANMEQ 507
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 GTANMEQGK 10
G ANM +GK
Sbjct: 290 GLANMTEGK 298
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 GTANMEQGK 10
G ANM +GK
Sbjct: 290 GLANMTEGK 298
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 GTANMEQGK 10
G ANM +GK
Sbjct: 290 GLANMTEGK 298
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 GTANMEQGK 10
G ANM +GK
Sbjct: 290 GLANMTEGK 298
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 GTANMEQGK 10
G ANM +GK
Sbjct: 290 GLANMTEGK 298
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 1 GGTANME 7
GGT +ME
Sbjct: 133 GGTVHME 139
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 GGTANME 7
GGT +ME
Sbjct: 133 GGTVHME 139
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 GGTANME 7
GGT +ME
Sbjct: 133 GGTVHME 139
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 GGTANMEQGK 10
G TA ME+ K
Sbjct: 19 GATAVMEKDK 28
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 TANMEQGK 10
TAN+ +GK
Sbjct: 493 TANVSRGK 500
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 3 TANMEQGK 10
TAN+ +GK
Sbjct: 493 TANVSRGK 500
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 TANMEQGK 10
TAN+ +GK
Sbjct: 493 TANVSRGK 500
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 3 TANMEQGK 10
TAN+ +GK
Sbjct: 493 TANVSRGK 500
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 3 TANMEQGK 10
TAN+ +GK
Sbjct: 493 TANVSRGK 500
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 3 TANMEQGK 10
TAN+ +GK
Sbjct: 493 TANVSRGK 500
17|SequenceR|90|81|NRPDDGGTAN
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 PDDGGTAN 10
PDDGG AN
Sbjct: 548 PDDGGDAN 555
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 RPDDGGTA 9
RPDDG A
Sbjct: 327 RPDDGSIA 334
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 2 RPDDG 6
RPDDG
Sbjct: 327 RPDDG 331
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 2 RPDDG 6
RPDDG
Sbjct: 327 RPDDG 331
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 2 RPDDG 6
RPDDG
Sbjct: 327 RPDDG 331
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 2 RPDDG 6
RPDDG
Sbjct: 326 RPDDG 330
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 2 RPDDG 6
RPDDG
Sbjct: 327 RPDDG 331
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 2 RPDDG 6
RPDDG
Sbjct: 326 RPDDG 330
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 2 RPDDG 6
RPDDG
Sbjct: 327 RPDDG 331
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 2 RPDDG 6
RPDDG
Sbjct: 327 RPDDG 331
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 2 RPDDG 6
RPDDG
Sbjct: 326 RPDDG 330
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 2 RPDDG 6
RPDDG
Sbjct: 326 RPDDG 330
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 2 RPDDGGTAN 10
RPD G AN
Sbjct: 47 RPDGGAAAN 55
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 2 RPDDG 6
RPDDG
Sbjct: 326 RPDDG 330
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 NRPDDGGTA 9
N PD+G T
Sbjct: 677 NDPDEGTTG 685
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 PDDGGT 8
PDDGG+
Sbjct: 249 PDDGGS 254
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 2 RPDDGGT 8
RP+D GT
Sbjct: 74 RPEDAGT 80
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 NRPDDG 6
+RPD+G
Sbjct: 27 SRPDEG 32
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 3 PDDGG 7
PDDGG
Sbjct: 985 PDDGG 989
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 4 DDGGTAN 10
DD GT N
Sbjct: 3 DDSGTEN 9
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 PDDGGTAN 10
PD GT N
Sbjct: 165 PDANGTLN 172
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 PDDGGTAN 10
PD GT N
Sbjct: 165 PDANGTLN 172
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 4 DDGGTAN 10
DD GT N
Sbjct: 3 DDSGTEN 9
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 4 DDGGTAN 10
DD GT N
Sbjct: 3 DDSGTEN 9
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 RPDDGGTAN 10
+PD GGT
Sbjct: 923 QPDAGGTVE 931
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 3 PDDGGTA 9
PDDG A
Sbjct: 198 PDDGAVA 204
18|SequenceR|95|86|CGGAANRPDD
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GGAANRPDD 10
G NRPDD
Sbjct: 188 GLRVNRPDD 196
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GGAANRPDD 10
G NRPDD
Sbjct: 188 GLRVNRPDD 196
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 CGGAANRPD 9
C AN+PD
Sbjct: 203 CATLANKPD 211
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 GGAANRPDD 10
GG A PDD
Sbjct: 388 GGQATSPDD 396
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 1 CGGAANRPDD 10
GG A PDD
Sbjct: 381 IGGQATSPDD 390
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 1 CGGAANRPDD 10
GG A PDD
Sbjct: 381 IGGQATSPDD 390
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 GGAANRPDD 10
GG A PDD
Sbjct: 379 GGQATSPDD 387
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 GGAANRP 8
GG A+RP
Sbjct: 44 GGPASRP 50
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 GGAANRP 8
GG A+RP
Sbjct: 44 GGPASRP 50
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGAANRP 8
GG NRP
Sbjct: 149 GGEENRP 155
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGAANRP 8
GG NRP
Sbjct: 149 GGEENRP 155
>sp|UL11P_HCMVA|PROTEIN UL11|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGAANR 7
GG ANR
Sbjct: 62 GGGANR 67
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 CGGAANRPDD 10
CG A RP++
Sbjct: 254 CGDGAARPEN 263
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GGAANRPD 9
GG+A RP+
Sbjct: 114 GGSAPRPE 121
19|SequenceR|100|91|QPERECGGAA
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 1 QPERECGGAA 10
+PE +CGG
Sbjct: 153 EPENDCGGGG 162
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 2 PERECG 7
PE ECG
Sbjct: 192 PEHECG 197
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PERECG 7
PE ECG
Sbjct: 192 PEHECG 197
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 2 PERECG 7
PE ECG
Sbjct: 192 PEHECG 197
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 ERECGGAA 10
ER CGGA
Sbjct: 489 ERSCGGAT 496
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 ERECGGAA 10
ER CGGA
Sbjct: 420 ERSCGGAT 427
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 PERECGGA 9
PE E GGA
Sbjct: 197 PEAEMGGA 204
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 QPERECG 7
+P R+CG
Sbjct: 338 KPSRKCG 344
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 QPERECG 7
+P R+CG
Sbjct: 341 KPSRKCG 347
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 QPERECG 7
QPE +CG
Sbjct: 436 QPEYDCG 442
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 ERECG 7
E+ECG
Sbjct: 170 EKECG 174
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 3 ERECG 7
E+ECG
Sbjct: 167 EKECG 171
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 3 ERECG 7
E+ECG
Sbjct: 167 EKECG 171
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 3 ERECG 7
E+ECG
Sbjct: 170 EKECG 174
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 3 ERECG 7
E+ECG
Sbjct: 170 EKECG 174
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 3 ERECG 7
E+ECG
Sbjct: 170 EKECG 174
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 3 ERECG 7
E+ECG
Sbjct: 170 EKECG 174
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 PERECGGAA 10
P R GGAA
Sbjct: 405 PPRASGGAA 413
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 ECGGAA 10
ECGG A
Sbjct: 907 ECGGTA 912
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 ECGGAA 10
ECGG A
Sbjct: 907 ECGGTA 912
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 6 CGGAA 10
CGGAA
Sbjct: 689 CGGAA 693
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PERECG 7
P R+CG
Sbjct: 492 PPRQCG 497
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 3 ERECG 7
+RECG
Sbjct: 418 QRECG 422
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 ERECG 7
+RECG
Sbjct: 418 QRECG 422
20|SequenceR|105|96|VRTLSQPERE
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 RTLSQPE 8
RTL +PE
Sbjct: 2064 RTLQRPE 2070
21|SequenceR|110|101|SSSLDVRTLS
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 SSSLDVRTLS 10
+S LD+RTLS
Sbjct: 1654 ASELDIRTLS 1663
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 SSLDVRTLS 10
S +DVRTLS
Sbjct: 1655 SEMDVRTLS 1663
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 SSLDVRTLS 10
S +D+RTLS
Sbjct: 1654 SEMDIRTLS 1662
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 SSSLDVRT 8
SSSLD++T
Sbjct: 612 SSSLDIQT 619
22|SequenceR|115|106|DGPLVSSSLD
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 2 GPLVSSSLD 10
GP VSS D
Sbjct: 282 GPAVSSGYD 290
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 3 PLVSSSLD 10
P++ SSLD
Sbjct: 377 PVIVSSLD 384
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 3 PLVSSSLD 10
P++ SSLD
Sbjct: 382 PVIVSSLD 389
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 GPLVSSSLD 10
GP V+ SLD
Sbjct: 851 GPGVAESLD 859
23|SequenceR|120|111|ALGVSDGPLV
>sp|PG035_VAR67|PROTEIN OPG035|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LGVSDGPLV 10
+ +SDGPL+
Sbjct: 48 MTLSDGPLL 56
>sp|PG035_VACCC|PROTEIN OPG035|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LGVSDGPLV 10
+ +SDGPL+
Sbjct: 48 MTLSDGPLL 56
>sp|PG035_MONPV|PROTEIN OPG035|Monkeypox virus (MPXV)
Query: 2 LGVSDGPLV 10
+ +SDGPL+
Sbjct: 48 MTLSDGPLL 56
>sp|UL68_HCMVA|UNCHARACTERIZED protein UL68|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LGVSDGPLV 10
+ V+DGPL+
Sbjct: 35 VSVNDGPLL 43
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ALGVSDGPLV 10
ALG+ GPL+
Sbjct: 48 ALGLDPGPLI 57
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALGVSDGPLV 10
ALG+ GPL+
Sbjct: 48 ALGLDPGPLI 57
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ALGVSDGPLV 10
ALG+ GPL+
Sbjct: 48 ALGLDPGPLI 57
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 VSDGPLV 10
V+DGPL+
Sbjct: 711 VTDGPLL 717
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 5 SDGPLV 10
+DGPLV
Sbjct: 593 ADGPLV 598
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 LGVSDGPLV 10
+G DGP++
Sbjct: 329 IGSQDGPVI 337
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 VSDGPLV 10
+ DGPL+
Sbjct: 1502 IEDGPLI 1508
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 4 VSDGPLV 10
+ DGPL+
Sbjct: 1501 IEDGPLI 1507
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 LGVSDGP 8
L +SDGP
Sbjct: 680 LDMSDGP 686
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 LGVSDGP 8
L +SDGP
Sbjct: 679 LDMSDGP 685
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 LGVSDGP 8
L +SDGP
Sbjct: 680 LDMSDGP 686
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 ALGVSDGPLV 10
ALGV PLV
Sbjct: 1014 ALGVPFPPLV 1023
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LGVSDG 7
LGV+DG
Sbjct: 1023 LGVADG 1028
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LGVSDG 7
LGV+DG
Sbjct: 1023 LGVADG 1028
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LGVSDG 7
LGV+DG
Sbjct: 1023 LGVADG 1028
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 LGVSDG 7
LGV+DG
Sbjct: 1023 LGVADG 1028
24|SequenceR|125|116|THLIVALGVS
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 THLIVALGV 9
TH +++LG+
Sbjct: 571 THFLLSLGI 579
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 THLIVALGVS 10
+HL++A+G S
Sbjct: 958 SHLMLAVGHS 967
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 THLIVALGVS 10
+HL++A+G S
Sbjct: 958 SHLMLAVGHS 967
>sp|DR8_HHV6U|UNCHARACTERIZED protein DR8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 THLIVALG 8
TH++VA G
Sbjct: 93 THVVVAGG 100
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 THLIVALGVS 10
+H+++A G+S
Sbjct: 953 SHVLLAAGLS 962
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 2 HLIVALGVS 10
H+++ LGV+
Sbjct: 19 HVVLKLGVN 27
25|SequenceR|130|121|DKRSDTHLIV
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 KRSDTHLI 9
K SD+HL+
Sbjct: 1117 KTSDSHLV 1124
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 DKRSDTH 7
DKR D H
Sbjct: 192 DKRGDLH 198
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 DKRSDTH 7
DKR D H
Sbjct: 192 DKRGDLH 198
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 DKRSDTHLI 9
DK+SDT +
Sbjct: 373 DKQSDTQYV 381
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 DKRSDTHLI 9
DK+SDT +
Sbjct: 373 DKQSDTQYV 381
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 DKRSDTHLI 9
DK+SDT +
Sbjct: 373 DKQSDTQYV 381
>sp|NP_ADE05|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 5
Query: 2 KRSDTH 7
KRSD H
Sbjct: 27 KRSDQH 32
>sp|NP_ADE02|PRE-HISTONE-LIKE nucleoprotein|Human adenovirus C serotype 2
Query: 2 KRSDTH 7
KRSD H
Sbjct: 27 KRSDQH 32
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DKRSDTHL 8
DKR ++H+
Sbjct: 787 DKRFESHI 794
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 DKRSDTHL 8
DKR ++H+
Sbjct: 787 DKRFESHI 794
26|SequenceR|135|126|GAPPSDKRSD
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 2 APPSDKRS 9
APPS+KR+
Sbjct: 39 APPSNKRT 46
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 APPSDKRS 9
APPS+KR+
Sbjct: 39 APPSNKRT 46
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 2 APPSDKRS 9
APPS+KR+
Sbjct: 39 APPSNKRT 46
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 2 APPSDKRS 9
APPS+KR+
Sbjct: 39 APPSNKRT 46
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 APPSDKRS 9
APPS+KR+
Sbjct: 39 APPSNKRT 46
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 2 APPSDKRS 9
APPS+KR+
Sbjct: 39 APPSNKRT 46
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GAPPSDKRSD 10
GAPP R+D
Sbjct: 567 GAPPCRTRAD 576
Query: 1 GAPPSDKRS 9
G+PPS+ S
Sbjct: 2197 GSPPSEASS 2205
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 3 PPSDK 7
PPSDK
Sbjct: 713 PPSDK 717
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 PPSDKR 8
PPSD R
Sbjct: 1944 PPSDNR 1949
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 GAPPSDKRSD 10
GAPP R+D
Sbjct: 567 GAPPCRIRAD 576
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 GAPPSDKRSD 10
GAPP R+D
Sbjct: 567 GAPPCRIRAD 576
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 GAPPSDKRSD 10
GAP +KR D
Sbjct: 727 GAPVPEKRDD 736
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 GAPPSD 6
G PPSD
Sbjct: 799 GDPPSD 804
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 GAPPSDKRSD 10
GAP KR+D
Sbjct: 721 GAPIPSKRND 730
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GAPPSDKRSD 10
GAPP R D
Sbjct: 567 GAPPCRIRKD 576
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PPSDKRS 9
PP DK S
Sbjct: 46 PPEDKHS 52
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GAPPSDKRSD 10
GAPP R D
Sbjct: 567 GAPPCRIRKD 576
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 GAPPSDKRSD 10
GAPP R D
Sbjct: 567 GAPPCRIRKD 576
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 3 PPSDKRS 9
PPS KRS
Sbjct: 877 PPSIKRS 883
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 GAPPSDKRSD 10
GAP KR+D
Sbjct: 741 GAPIPGKRND 750
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 PSDKRSD 10
P+DKR++
Sbjct: 914 PADKRTE 920
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PSDKRSD 10
P+DKR++
Sbjct: 914 PADKRTE 920
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PSDKRSD 10
P+DKR++
Sbjct: 914 PADKRTE 920
>sp|PHOSP_ISFV|PHOSPHOPROTEIN virus (ISFV)
Query: 2 APPSDKRSD 10
PPS RSD
Sbjct: 187 TPPSSLRSD 195
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 3 PPSDKRS 9
PP D+RS
Sbjct: 178 PPVDQRS 184
27|SequenceR|140|131|RGAPSGAPPS
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 GAPSGAP 8
G PSGAP
Sbjct: 2078 GMPSGAP 2084
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 PSGAPP 9
P+GAPP
Sbjct: 520 PTGAPP 525
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 RGAPSGAPPS 10
RG+P APP+
Sbjct: 7 RGSPDSAPPT 16
>sp|VE6_HPV03|PROTEIN E6|Human papillomavirus 3
Query: 1 RGAPSGA 7
RGAP GA
Sbjct: 59 RGAPYGA 65
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 2 GAPSGAP 8
G PSG+P
Sbjct: 2013 GMPSGSP 2019
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 GAPSGAP 8
G PSG+P
Sbjct: 2004 GMPSGSP 2010
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 GAPSGAP 8
G PSG+P
Sbjct: 2005 GMPSGSP 2011
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 RGAPSGAPPS 10
+G P+ PP+
Sbjct: 1902 KGLPAAIPPA 1911
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 RGAPSGAPPS 10
+G P+ PP+
Sbjct: 1903 KGLPAAIPPA 1912
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 RGAPSGAPPS 10
+G P+ PP+
Sbjct: 1902 KGLPAAIPPA 1911
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 RGAPSGAPPS 10
+G P+ PP+
Sbjct: 1902 KGLPAAIPPA 1911
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 RGAPSGAPPS 10
+G P+ PP+
Sbjct: 1903 KGLPAAIPPA 1912
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 RGAPSGAPPS 10
+G P+ PP+
Sbjct: 1903 KGLPAAIPPA 1912
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RGAPSGAPP 9
RG+P +PP
Sbjct: 417 RGSPGDSPP 425
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RGAPSGAPP 9
RG+P +PP
Sbjct: 417 RGSPGDSPP 425
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 4 PSGAPPS 10
P+G PPS
Sbjct: 305 PNGEPPS 311
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 GAPSGAPPS 10
GAP PP+
Sbjct: 310 GAPDRCPPT 318
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 GAPSGAPPS 10
GAP PP+
Sbjct: 310 GAPDRCPPT 318
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 GAPSGAP 8
G+P G+P
Sbjct: 89 GSPGGSP 95
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 APSGAPP 9
APSG PP
Sbjct: 2372 APSGCPP 2378
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 APSGAPP 9
APSG PP
Sbjct: 2372 APSGCPP 2378
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 3 APSGAPP 9
APS PP
Sbjct: 245 APSSPPP 251
>sp|PG125_VAR67|SCAFFOLD protein OPG125|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GAPSGAPPS 10
G P+G P S
Sbjct: 301 GPPTGYPES 309
>sp|PG125_VACCT|SCAFFOLD protein OPG125|Vaccinia virus (strain Tian Tan)
Query: 2 GAPSGAPPS 10
G P+G P S
Sbjct: 301 GPPTGYPES 309
>sp|PG125_VACCC|SCAFFOLD protein OPG125|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GAPSGAPPS 10
G P+G P S
Sbjct: 301 GPPTGYPES 309
>sp|PG125_VACCA|SCAFFOLD protein OPG125|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GAPSGAPPS 10
G P+G P S
Sbjct: 301 GPPTGYPES 309
>sp|PG125_MONPV|SCAFFOLD protein OPG125|Monkeypox virus (MPXV)
Query: 2 GAPSGAPPS 10
G P+G P S
Sbjct: 301 GPPTGYPES 309
>sp|D13_VARV|SCAFFOLD protein D13|Variola virus
Query: 2 GAPSGAPPS 10
G P+G P S
Sbjct: 301 GPPTGYPES 309
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 GAPSGAPPS 10
GAP PP+
Sbjct: 310 GAPDRCPPT 318
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 RGAPSGAP 8
RGAP G P
Sbjct: 426 RGAPVGTP 433
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 3 APSGAPPS 10
AP GAP S
Sbjct: 6 APKGAPNS 13
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RGAPSGAPP 9
RGAP+ PP
Sbjct: 738 RGAPTPTPP 746
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 2 GAPSGAPPS 10
AP+G PP+
Sbjct: 718 AAPTGIPPA 726
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 4 PSGAPPS 10
P G+PP+
Sbjct: 159 PLGSPPT 165
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 RGAPSG 6
RGAPSG
Sbjct: 143 RGAPSG 148
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 GAPSGAP 8
APSGAP
Sbjct: 158 AAPSGAP 164
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 GAPSGAP 8
APSGAP
Sbjct: 158 AAPSGAP 164
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 3 APSGAPPS 10
AP GAP S
Sbjct: 125 APKGAPNS 132
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 RGAPSGAPP 9
R AP+GA P
Sbjct: 101 RSAPAGAAP 109
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 1 RGAPSGAPP 9
R AP+GA P
Sbjct: 101 RSAPAGAAP 109
>sp|Y215_ADE02|UNCHARACTERIZED protein F-215|Human adenovirus C serotype 2
Query: 1 RGAPSGAP 8
RG P+GAP
Sbjct: 207 RGKPAGAP 214
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 RGAPSGAPP 9
RGA APP
Sbjct: 30 RGATQTAPP 38
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 RGAPSGAPP 9
RGA APP
Sbjct: 30 RGATQTAPP 38
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 APSGAPPS 10
AP GAP S
Sbjct: 125 APKGAPNS 132
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GAPSGAP 8
GAPS AP
Sbjct: 636 GAPSAAP 642
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GAPSGAP 8
GAPS AP
Sbjct: 636 GAPSAAP 642
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 4 PSGAPP 9
P G+PP
Sbjct: 334 PHGSPP 339
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 RGAPSGAP 8
+GA SGAP
Sbjct: 1526 QGAYSGAP 1533
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 RGAPSGAP 8
+GA SGAP
Sbjct: 1526 QGAYSGAP 1533
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 RGAPSGAP 8
+GA SGAP
Sbjct: 1526 QGAYSGAP 1533
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 4 PSGAPP 9
P G+PP
Sbjct: 334 PHGSPP 339
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 RGAPSGAP 8
+GA SGAP
Sbjct: 1526 QGAYSGAP 1533
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 RGAPSGAP 8
+GA SGAP
Sbjct: 1526 QGAYSGAP 1533
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 APSGAP 8
AP GAP
Sbjct: 125 APKGAP 130
28|SequenceR|145|136|SNYISRGAPS
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 1 SNYISRG 7
+NYIS+G
Sbjct: 130 TNYISQG 136
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 1 SNYISR 6
SNY+SR
Sbjct: 584 SNYVSR 589
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 5 SRGAPS 10
SRGAP+
Sbjct: 171 SRGAPT 176
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 SNYISR 6
SNY+SR
Sbjct: 585 SNYVSR 590
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 SNYISRGAPS 10
+ YI RG P+
Sbjct: 218 TEYIRRGLPA 227
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SNYISR 6
+NYISR
Sbjct: 181 NNYISR 186
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SNYISR 6
+NYISR
Sbjct: 181 NNYISR 186
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SNYISR 6
+NYISR
Sbjct: 181 NNYISR 186
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 3 YISRGAP 9
YI R AP
Sbjct: 300 YIQRSAP 306
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 3 YISRGAP 9
YI R AP
Sbjct: 300 YIQRSAP 306
29|SequenceR|150|141|CYVYFSNYIS
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 1 CYVYFSNYI 9
C+ YF NY+
Sbjct: 521 CWTYFDNYM 529
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 1 CYVYFSNYI 9
C+ YF NY+
Sbjct: 525 CWSYFDNYM 533
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 CYVYFSNYI 9
C++Y NY+
Sbjct: 483 CWLYMDNYL 491
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 1 CYVYFSNYI 9
C+ YF Y+
Sbjct: 535 CWTYFDTYM 543
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 CYVYFSNYI 9
C+ YF Y+
Sbjct: 522 CWTYFDTYM 530
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 332 CFMEDSNYVS 341
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 331 CFMEDSNYVS 340
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 331 CFMEDSNYVS 340
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 331 CFMEDSNYVS 340
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 332 CFMEDSNYVS 341
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 331 CFMEDSNYVS 340
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 331 CFMEDSNYVS 340
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 CYVYFSNYIS 10
C++ SNY+S
Sbjct: 331 CFMEDSNYVS 340
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 YVYFSNYI 9
Y Y++NY+
Sbjct: 474 YGYYANYV 481
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CYVYFSNYIS 10
C VY S Y++
Sbjct: 18 CLVYCSQYVT 27
>sp|VPR_HV1H3|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 YVYFSNYIS 10
+++F N++S
Sbjct: 69 FIHFQNWVS 77
>sp|VPR_HV1B5|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 YVYFSNYIS 10
+++F N++S
Sbjct: 69 FIHFQNWVS 77
>sp|VPR_HV1B1|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 YVYFSNYIS 10
+++F N++S
Sbjct: 69 FIHFQNWVS 77
>sp|VPR_HV112|PROTEIN Vpr|Human immunodeficiency virus type 1
Query: 2 YVYFSNYIS 10
+++F N++S
Sbjct: 69 FIHFQNWVS 77
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 2 YVYFSNYIS 10
Y Y+ N++S
Sbjct: 64 YSYYCNFVS 72
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 2 YVYFSNYIS 10
Y YF+N +S
Sbjct: 413 YQYFNNQLS 421
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 YVYFSNYIS 10
Y YF+N +S
Sbjct: 413 YQYFNNQLS 421
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 CYVYFSNY 8
C+V F N+
Sbjct: 979 CWVAFGNF 986
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CYVYFSNYI 9
CY F +YI
Sbjct: 908 CYYGFKDYI 916
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CYVYFSNYI 9
CY F +YI
Sbjct: 908 CYYGFKDYI 916
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 673 CYMHVSDY 680
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 673 CYMHVSDY 680
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 672 CYMHVSDY 679
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 2 YVYFSNYI 9
Y YFSN +
Sbjct: 388 YTYFSNTV 395
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 672 CYMHVSDY 679
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 CYVYFSNYI 9
Y YFSN I
Sbjct: 387 MYTYFSNTI 395
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 CYVYFSNYI 9
Y YFSN I
Sbjct: 387 MYTYFSNTI 395
>sp|PG161_VARV|PROTEIN OPG161|Variola virus
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 108 CYIFHSDY 115
>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 108 CYIFHSDY 115
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 2 YVYFSNYI 9
Y YFSN I
Sbjct: 397 YTYFSNTI 404
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 672 CYMHVSDY 679
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CYVYFSNY 8
CY++ S+Y
Sbjct: 672 CYMHVSDY 679
>sp|YVAP_VACCC|UNCHARACTERIZED 9.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CYVYFSNY 8
C+VY SN+
Sbjct: 70 CFVYPSNF 77
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 CYVYFSNYIS 10
C VY + Y++
Sbjct: 15 CLVYCTQYVT 24
>sp|PG161_MONPV|PROTEIN OPG161|Monkeypox virus (MPXV)
Query: 1 CYVYFSNYIS 10
CY+ S+Y S
Sbjct: 109 CYILHSDYKS 118
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 CYVYFSN 7
+VYFSN
Sbjct: 747 VFVYFSN 753
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 CYVYFSN 7
+VYFSN
Sbjct: 747 VFVYFSN 753
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 CYVYFSN 7
+VYFSN
Sbjct: 747 VFVYFSN 753
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 CYVYFSN 7
+VYFSN
Sbjct: 747 VFVYFSN 753
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 CYVYFSN 7
+VYFSN
Sbjct: 747 VFVYFSN 753
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 YVYFSNYIS 10
Y +FSNY+
Sbjct: 3154 YWFFSNYLK 3162
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YVYFSNYIS 10
Y +FSNY+
Sbjct: 3154 YWFFSNYLK 3162
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YVYFSNYI 9
+V+FS YI
Sbjct: 42 HVFFSEYI 49
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 YVYFSNYIS 10
Y +SN+IS
Sbjct: 1944 YPRYSNFIS 1952
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 YVYFSNYIS 10
Y +SN+IS
Sbjct: 1944 YPRYSNFIS 1952
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 2 YVYFSNYI 9
+V+FS YI
Sbjct: 42 HVFFSEYI 49
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 YVYFSNYIS 10
Y +SN+IS
Sbjct: 1944 YPRYSNFIS 1952
30|SequenceR|155|146|QCPGKCYVYF
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PGKCYVY 9
PG+CY Y
Sbjct: 616 PGQCYAY 622
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 3 PGKCYVY 9
PGKC V+
Sbjct: 379 PGKCLVF 385
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 3 PGKCYVY 9
PGKC V+
Sbjct: 378 PGKCLVF 384
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QCPGKCY 7
+ PG+CY
Sbjct: 569 ESPGRCY 575
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QCPGKCY 7
+ PG+CY
Sbjct: 569 ESPGRCY 575
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QCPGKCY 7
+ PG+CY
Sbjct: 568 ESPGRCY 574
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 103 PGKCYQF 109
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 3 PGKCYVY 9
PGKCY +
Sbjct: 126 PGKCYQF 132
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 QCPGKCYV 8
Q PG CY+
Sbjct: 893 QVPGFCYM 900
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 751 PGKRYIY 757
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 751 PGKRYIY 757
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 750 PGKRYIY 756
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 752 PGKRYIY 758
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 749 PGKRYIY 755
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 751 PGKRYIY 757
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 752 PGKRYIY 758
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 750 PGKRYIY 756
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 751 PGKRYIY 757
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 751 PGKRYIY 757
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 2 CPGKCY 7
C G+CY
Sbjct: 286 CEGECY 291
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 QCPGKCY 7
+CP +C+
Sbjct: 447 ECPTECF 453
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 3 PGKCYVY 9
PG+CY +
Sbjct: 126 PGRCYQF 132
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 PGKCYVY 9
PGK Y+Y
Sbjct: 749 PGKRYLY 755
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 PGKCYVYF 10
PG+ + YF
Sbjct: 545 PGRSFSYF 552
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 PGKCYVYF 10
PG+ + YF
Sbjct: 545 PGRSFSYF 552
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 3 PGKCY 7
PG CY
Sbjct: 578 PGTCY 582
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 3 PGKCY 7
PG CY
Sbjct: 590 PGTCY 594
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 3 PGKCY 7
PG CY
Sbjct: 590 PGTCY 594
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 3 PGKCY 7
PG CY
Sbjct: 593 PGACY 597
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 3 PGKCY 7
PG CY
Sbjct: 593 PGACY 597
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 3 PGKCY 7
PG CY
Sbjct: 592 PGACY 596
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 3 PGKCY 7
PG CY
Sbjct: 593 PGACY 597
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 PGKCYVYF 10
PG+ + YF
Sbjct: 545 PGRSFSYF 552
>sp|V_MUMPZ|NON-STRUCTURAL protein V|Mumps virus genotype N (strain
Query: 2 CPGKC 6
CP KC
Sbjct: 210 CPAKC 214
>sp|V_MUMPJ|NON-STRUCTURAL protein V|Mumps virus genotype A (strain
Query: 2 CPGKC 6
CP KC
Sbjct: 210 CPAKC 214
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 2 CPGKC 6
CP KC
Sbjct: 210 CPAKC 214
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 PGKCYVY 9
PGKC V+
Sbjct: 1140 PGKCAVH 1146
>sp|V_MUMPE|NON-STRUCTURAL protein V|Mumps virus (strain Enders) (MuV)
Query: 2 CPGKC 6
CP KC
Sbjct: 210 CPAKC 214
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 PGKCYVY 9
PGKC V+
Sbjct: 1141 PGKCAVH 1147
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 PGKCYVY 9
PGKC V+
Sbjct: 1140 PGKCAVH 1146
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 QCPGKCYVYF 10
+C +C VY+
Sbjct: 933 RCSCRCGVYY 942
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 PGKCYVY 9
PGKC V+
Sbjct: 1141 PGKCAVH 1147
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 5 KCYVYF 10
KC+VY
Sbjct: 347 KCFVYL 352
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 5 KCYVYF 10
KC+VY
Sbjct: 347 KCFVYL 352
>sp|V_MUMPM|NON-STRUCTURAL protein V|Mumps virus genotype B (strain
Query: 2 CPGKC 6
CP KC
Sbjct: 210 CPAKC 214
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 6 CYVYF 10
CYV+F
Sbjct: 410 CYVHF 414
>sp|V_MUMP1|NON-STRUCTURAL protein V|Mumps virus (strain SBL-1) (MuV)
Query: 2 CPGKC 6
CP KC
Sbjct: 210 CPAKC 214
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 QCPGKCYV 8
Q PG C++
Sbjct: 893 QVPGFCFM 900
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 CPGKC 6
CP KC
Sbjct: 82 CPMKC 86
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 CPGKC 6
CP KC
Sbjct: 84 CPMKC 88
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPGKCYVYF 10
CP +C V+
Sbjct: 389 CPVECEVFL 397
>sp|VGCR_HHV6Z|G-PROTEIN coupled receptor|Human herpesvirus 6B (strain Z29)
Query: 4 GKCYVYF 10
GKC VY
Sbjct: 179 GKCVVYL 185
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 GKCYVYF 10
GK Y YF
Sbjct: 1543 GKLYSYF 1549
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 GKCYVYF 10
GK Y YF
Sbjct: 1543 GKLYSYF 1549
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 2 CPGKCYVYF 10
C G C V F
Sbjct: 221 CKGHCTVSF 229
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 2 CPGKCYVYF 10
C G C V F
Sbjct: 221 CKGHCTVSF 229
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 2 CPGKCYVYF 10
C G C V F
Sbjct: 221 CKGHCTVSF 229
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 PGKCYVYF 10
PG+ Y Y
Sbjct: 641 PGESYAYL 648
>sp|ICP22_VZVO|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PGKCY 7
PG CY
Sbjct: 210 PGDCY 214
>sp|ICP22_VZVD|TRANSCRIPTIONAL regulator ICP22 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 PGKCY 7
PG CY
Sbjct: 210 PGDCY 214
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 PGKCYVYF 10
PG+ Y Y
Sbjct: 642 PGESYAYL 649
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 GKCYVYF 10
G C+ YF
Sbjct: 523 GTCWSYF 529
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 CPGK 5
CPGK
Sbjct: 406 CPGK 409
>sp|NS1_INBSJ|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/1964)
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBRU|NON-STRUCTURAL protein 1|Influenza B virus (strain B/RU/1969)
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBMD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Maryland/1959)
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBHK|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Hong
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBBA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/BA/1978)
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBAD|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|NS1_INBAC|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Ann
Query: 3 PGKC 6
PGKC
Sbjct: 125 PGKC 128
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 QCPGKC 6
+CPG C
Sbjct: 453 RCPGFC 458
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 QCPGKC 6
+CPG C
Sbjct: 453 RCPGFC 458
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 QCPGKC 6
+CPG C
Sbjct: 453 RCPGFC 458
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 QCPGKC 6
+CPG C
Sbjct: 453 RCPGFC 458
>sp|PG161_VARV|PROTEIN OPG161|Variola virus
Query: 4 GKCYVY 9
G CY++
Sbjct: 106 GSCYIF 111
>sp|PG161_VAR67|PROTEIN OPG161|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GKCYVY 9
G CY++
Sbjct: 106 GSCYIF 111
>sp|VP35_EBOZM|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PGKCY 7
PG CY
Sbjct: 51 PGLCY 55
>sp|VP35_EBOZ5|POLYMERASE cofactor VP35|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PGKCY 7
PG CY
Sbjct: 51 PGLCY 55
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 6 CYVYF 10
CY++F
Sbjct: 409 CYIHF 413
>sp|TEG7_HCMVM|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 QCPGKC 6
QC KC
Sbjct: 77 QCQSKC 82
>sp|TEG7_HCMVA|TEGUMENT protein UL51 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QCPGKC 6
QC KC
Sbjct: 77 QCQSKC 82
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 CPGKC 6
C GKC
Sbjct: 467 CEGKC 471
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CPGKC 6
C GKC
Sbjct: 467 CDGKC 471
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 4 GKCYVYF 10
G C+ YF
Sbjct: 528 GTCWSYF 534
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 4 GKCYVY 9
GKC VY
Sbjct: 174 GKCVVY 179
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 CPGKC 6
C GKC
Sbjct: 467 CDGKC 471
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 679 QRPGLCQVF 687
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 689 QRPGLCQVF 697
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 689 QRPGLCQVF 697
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 689 QRPGLCQVF 697
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 QCPGKCYVY 9
Q PG C V+
Sbjct: 690 QRPGLCQVF 698
31|SequenceR|160|151|GPQVRQCPGK
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 859 GPETKECP 866
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 928 GPETKECP 935
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 928 GPETKECP 935
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 930 GPETKECP 937
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 926 GPETKECP 933
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 923 GPETKECP 930
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 931 GPETKECP 938
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 GPQVRQCPGK 10
GP+++ C GK
Sbjct: 146 GPRIKTCTGK 155
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 PQVRQC 7
PQ+RQC
Sbjct: 39 PQLRQC 44
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96)
Query: 2 PQVRQC 7
PQ+RQC
Sbjct: 39 PQLRQC 44
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 GPQVRQCP 8
GP+ ++CP
Sbjct: 923 GPESKECP 930
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 924 GPETEECP 931
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GPQVRQCPGK 10
GP + +CP K
Sbjct: 86 GPSIDRCPRK 95
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GPQVRQCPGK 10
GP + +CP K
Sbjct: 86 GPSIDRCPRK 95
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GPQVRQCPGK 10
GP + +CP K
Sbjct: 86 GPSIDRCPRK 95
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 930 GPETAECP 937
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP+VRQ P
Sbjct: 629 GPKVRQWP 636
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 632 GPETAECP 639
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 629 GPKIRQWP 636
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 GPQVRQCP 8
GP+ +CP
Sbjct: 912 GPETAECP 919
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 627 GPKIRQWP 634
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPQVRQCPGK 10
GP +CP +
Sbjct: 911 GPDTSECPNE 920
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPQVRQCPGK 10
GP +CP +
Sbjct: 911 GPDTSECPNE 920
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 629 GPKIRQWP 636
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPQVRQCPGK 10
GP +CP +
Sbjct: 911 GPDTSECPNE 920
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPQVRQCPGK 10
GP +CP +
Sbjct: 911 GPDTSECPNE 920
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 GPQVRQCPGK 10
GP +CP +
Sbjct: 911 GPDTSECPNE 920
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 PQVRQCPGK 10
P+VR PG+
Sbjct: 235 PKVRGQPGR 243
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 VRQCPG 9
VRQC G
Sbjct: 3560 VRQCSG 3565
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 VRQCPG 9
VRQC G
Sbjct: 3537 VRQCSG 3542
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VRQCPG 9
VRQC G
Sbjct: 3560 VRQCSG 3565
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 VRQCPG 9
VRQC G
Sbjct: 3537 VRQCSG 3542
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 912 GPNTPECP 919
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 630 GPKLRQWP 637
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 911 GPDTPECP 918
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 912 GPDTPECP 919
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 2 PQVRQCPGK 10
PQ + PG+
Sbjct: 410 PQTTETPGR 418
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PQVRQCPGK 10
PQ + PG+
Sbjct: 410 PQTTETPGR 418
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 606 GPKVKQWP 613
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 910 GPNTPECP 917
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PQVRQC 7
PQ+R C
Sbjct: 39 PQLRNC 44
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PQVRQC 7
PQ+R C
Sbjct: 39 PQLRNC 44
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 629 GPKLRQWP 636
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 910 GPSTPECP 917
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 910 GPSTPECP 917
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 604 GPKVKQWP 611
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 617 GPKVKQWP 624
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 611 GPKVKQWP 618
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 604 GPKVKQWP 611
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 609 GPKVKQWP 616
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 607 GPKVKQWP 614
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 910 GPNTPECP 917
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 910 GPNTPECP 917
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 606 GPKVKQWP 613
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 602 GPKVKQWP 609
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 617 GPKVKQWP 624
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 617 GPKVKQWP 624
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 615 GPKVKQWP 622
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 599 GPKVKQWP 606
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 630 GPRLRQWP 637
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPQVRQCP 8
GP++RQ P
Sbjct: 629 GPRLRQWP 636
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 606 GPKVKQWP 613
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 600 GPKVKQWP 607
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPKVKQWP 612
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 600 GPKVKQWP 607
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 598 GPKVKQWP 605
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 609 GPKVKQWP 616
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 606 GPKVKQWP 613
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 604 GPKVKQWP 611
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 600 GPKVKQWP 607
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 610 GPRVKQWP 617
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 600 GPRVKQWP 607
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 615 GPRVKQWP 622
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 603 GPRVKQWP 610
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPQVRQCP 8
GP+V+Q P
Sbjct: 605 GPRVKQWP 612
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 4 VRQCP 8
+RQCP
Sbjct: 125 MRQCP 129
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 VRQCP 8
+RQCP
Sbjct: 124 MRQCP 128
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 GPQVRQCP 8
GP +CP
Sbjct: 930 GPSGEECP 937
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 GPQVRQ 6
GP+VRQ
Sbjct: 73 GPRVRQ 78
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 GPQVRQ 6
GP+VRQ
Sbjct: 73 GPRVRQ 78
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 4 VRQCPG 9
VR CPG
Sbjct: 680 VRVCPG 685
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 GPQVRQ 6
GP+VRQ
Sbjct: 73 GPRVRQ 78
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 GPQVRQ 6
GP+VRQ
Sbjct: 73 GPRVRQ 78
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 1 GPQVRQ 6
GP+VRQ
Sbjct: 73 GPRVRQ 78
32|SequenceR|165|156|QVRLKGPQVR
>sp|BM2_INBMP|MATRIX protein 2|Influenza B virus (strain B/Memphis/12/1997)
Query: 1 QVRLKGP 7
++R+KGP
Sbjct: 38 KIRIKGP 44
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 RLKGPQ 8
RLKGP+
Sbjct: 2163 RLKGPK 2168
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 RLKGPQ 8
RLKGP+
Sbjct: 2128 RLKGPK 2133
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 RLKGPQ 8
RLKGP+
Sbjct: 797 RLKGPK 802
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 RLKGPQ 8
RLKGP+
Sbjct: 2161 RLKGPK 2166
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 LKGPQ 8
LKGPQ
Sbjct: 3 LKGPQ 7
33|SequenceR|170|161|RCTSCQVRLK
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 RCTSCQ 6
RC SCQ
Sbjct: 1077 RCPSCQ 1082
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 CTSCQVRLK 10
CT+C+++L+
Sbjct: 112 CTACKLQLE 120
>sp|VE7_HPV38|PROTEIN E7|Human papillomavirus 38
Query: 2 CTSCQVRLK 10
C C+VRLK
Sbjct: 55 CGGCEVRLK 63
>sp|VE7_HPV12|PROTEIN E7|Human papillomavirus 12
Query: 2 CTSCQVRLK 10
C+SC+V L+
Sbjct: 58 CSSCEVNLR 66
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 CTSCQ 6
CT CQ
Sbjct: 1210 CTQCQ 1214
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 CTSC 5
CTSC
Sbjct: 766 CTSC 769
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 CTSC 5
CTSC
Sbjct: 766 CTSC 769
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CTSC 5
CTSC
Sbjct: 766 CTSC 769
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CTSC 5
CTSC
Sbjct: 766 CTSC 769
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 CTSC 5
CTSC
Sbjct: 766 CTSC 769
>sp|ST_POVBA|SMALL t antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 CTSCQVRLK 10
C CQ+RL+
Sbjct: 111 CMLCQLRLR 119
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CTSCQ 6
CTSC+
Sbjct: 122 CTSCE 126
>sp|ST_POVBK|SMALL t antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 CTSCQVRLK 10
C CQ+RL+
Sbjct: 111 CMLCQLRLR 119
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CTSCQ 6
CTSC
Sbjct: 142 CTSCH 146
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CTSCQ 6
CTSC
Sbjct: 142 CTSCH 146
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CTSCQ 6
CTSC
Sbjct: 142 CTSCH 146
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CTSCQ 6
CTSC+
Sbjct: 122 CTSCE 126
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 CTSC 5
CTSC
Sbjct: 1139 CTSC 1142
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 2 CTSCQVRL 9
CT C V +
Sbjct: 170 CTVCSVNI 177
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 CTSC 5
CTSC
Sbjct: 1137 CTSC 1140
34|SequenceR|175|166|TLTAQRCTSC
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 TLTAQRCTS 9
TLTA CTS
Sbjct: 188 TLTAPWCTS 196
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 TAQRCTSC 10
T+ RC SC
Sbjct: 5367 TSLRCGSC 5374
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 TAQRCTSC 10
T+ RC SC
Sbjct: 5397 TSLRCGSC 5404
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 TAQRCTSC 10
T+ RC SC
Sbjct: 5347 TSLRCGSC 5354
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 TAQRCTSC 10
T+ RC SC
Sbjct: 5309 TSLRCGSC 5316
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 2 LTAQRCTSC 10
L QRC++C
Sbjct: 8 LWKQRCSTC 16
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 LTAQRCTSC 10
L RC SC
Sbjct: 1073 LKCLRCPSC 1081
35|SequenceR|180|171|PGQTLTLTAQ
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 PGQTLTL 7
PG TLT+
Sbjct: 1325 PGNTLTI 1331
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 PGQTLTL 7
PG TLT+
Sbjct: 1325 PGNTLTI 1331
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 PGQTLTL 7
PG TLT+
Sbjct: 1325 PGNTLTI 1331
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 PGQTLTLTAQ 10
PG T+T+ A+
Sbjct: 1058 PGTTVTINAK 1067
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 PGQTLTLTAQ 10
PG T+T+ A+
Sbjct: 1058 PGTTVTINAK 1067
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 PGQTLTLTAQ 10
PG T+T+ A+
Sbjct: 1058 PGTTVTINAK 1067
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 PGQTLTLTAQ 10
PG T+T+ A+
Sbjct: 1058 PGTTVTINAK 1067
>sp|VE4_HPV35|PROTEIN E4|Human papillomavirus 35
Query: 2 GQTLTLTAQ 10
G TL LTAQ
Sbjct: 72 GSTLHLTAQ 80
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 PGQTLTLTA 9
PG T+T+T+
Sbjct: 1069 PGTTVTVTS 1077
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 PGQTLTLTA 9
PG T+T A
Sbjct: 253 PGDTITFEA 261
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 PGQTLTLTA 9
PG T+T A
Sbjct: 253 PGDTITFEA 261
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 PGQTLTLTA 9
PG T+T A
Sbjct: 253 PGDTITFEA 261
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 1 PGQTLTLTA 9
PG T+T A
Sbjct: 253 PGDTITFEA 261
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 PGQTLTLTA 9
PG T+T A
Sbjct: 253 PGDTITFEA 261
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 PGQTLTLTA 9
PG T+T A
Sbjct: 253 PGDTITFEA 261
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 PGQTLTLT 8
PG T+T+T
Sbjct: 1074 PGTTVTIT 1081
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 GQTLTLTAQ 10
G+T LTA+
Sbjct: 420 GETFELTAE 428
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 PGQTLTLT 8
PG T+TL+
Sbjct: 1072 PGTTVTLS 1079
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 PGQTLTLT 8
PG T+T+T
Sbjct: 1070 PGTTVTVT 1077
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 PGQTLTLT 8
PG T+TL+
Sbjct: 1072 PGTTVTLS 1079
36|SequenceR|185|176|DDWCSPGQTL
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 WCSPGQ 8
WC PGQ
Sbjct: 270 WCPPGQ 275
>sp|GLYCO_RABVP|GLYCOPROTEIN virus (strain Pasteur vaccins
Query: 3 WCSPGQ 8
WC PGQ
Sbjct: 270 WCPPGQ 275
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 2 DWCSPGQ 8
+WCSP Q
Sbjct: 269 EWCSPDQ 275
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 3 WCSPGQ 8
WCSP Q
Sbjct: 270 WCSPDQ 275
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 WCSPGQTL 10
WC PGQ +
Sbjct: 270 WCPPGQLV 277
>sp|GLYCO_ABLVB|GLYCOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 WCSPGQTL 10
WCSP Q +
Sbjct: 270 WCSPNQLV 277
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 1 DDWCSPGQ 8
DD C PG+
Sbjct: 102 DDICYPGK 109
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 1 DDWCSPGQ 8
DD C PG+
Sbjct: 102 DDICYPGK 109
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 1 DDWCSPGQ 8
DD C PG+
Sbjct: 102 DDICYPGK 109
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 1 DDWCSPGQ 8
DD C PG+
Sbjct: 102 DDICYPGK 109
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 WCSPGQT 9
WC GQT
Sbjct: 2061 WCFTGQT 2067
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 1 DDWCSPGQ 8
DD C PG+
Sbjct: 102 DDICYPGK 109
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 1 DDWCSPGQ 8
DD C PG+
Sbjct: 102 DDICYPGK 109
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WCSPG 7
WC PG
Sbjct: 790 WCVPG 794
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WCSPG 7
WC PG
Sbjct: 790 WCVPG 794
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 WCSPG 7
WC PG
Sbjct: 790 WCVPG 794
>sp|TEG3_HHV2H|TEGUMENT protein UL14|Human herpesvirus 2 (strain HG52)
Query: 1 DDWCSPGQT 9
D W SPG +
Sbjct: 137 DGWMSPGDS 145
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 3 WCSPGQ 8
WC P Q
Sbjct: 270 WCPPDQ 275
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 WCSPGQ 8
WC GQ
Sbjct: 6761 WCKDGQ 6766
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 3 WCSPGQ 8
WC P Q
Sbjct: 270 WCPPDQ 275
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 3 WCSPGQ 8
WC P Q
Sbjct: 270 WCPPDQ 275
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 WCSPGQ 8
WC P Q
Sbjct: 270 WCPPDQ 275
>sp|BET_FOAMV|PROTEIN Bet|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 DDWCSP 6
D WCSP
Sbjct: 234 DVWCSP 239
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 WCSPGQ 8
WC P Q
Sbjct: 270 WCPPDQ 275
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 WCSPGQ 8
WC P Q
Sbjct: 270 WCPPDQ 275
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DWCSPGQTL 10
DWCS +L
Sbjct: 393 DWCSMRNSL 401
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 DWCSPGQTL 10
DW S G+T+
Sbjct: 87 DWVSFGRTI 95
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DWCSPGQTL 10
DWCS +L
Sbjct: 393 DWCSMRNSL 401
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DWCSPGQTL 10
+W PGQTL
Sbjct: 340 EW-KPGQTL 347
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DWCSPGQTL 10
+W PGQTL
Sbjct: 340 EW-KPGQTL 347
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DDWCSPGQTL 10
+ WCS G L
Sbjct: 140 NSWCSEGVLL 149
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 3 WCSPGQT 9
W SPG++
Sbjct: 415 WLSPGRS 421
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 3 WCSPGQT 9
W SPG++
Sbjct: 415 WLSPGRS 421
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 DDWCSP 6
D WC+P
Sbjct: 248 DRWCNP 253
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 DDWCSP 6
D WC+P
Sbjct: 248 DRWCNP 253
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 DDWCSP 6
D WC+P
Sbjct: 248 DRWCNP 253
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 DDWCSP 6
D WC+P
Sbjct: 248 DRWCNP 253
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 DDWCSP 6
D WC+P
Sbjct: 248 DRWCNP 253
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 DDWCSP 6
D WC+P
Sbjct: 248 DRWCNP 253
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 3 WCSPGQT 9
W SPG++
Sbjct: 415 WLSPGRS 421
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 2 DWCSP 6
+WC+P
Sbjct: 195 EWCNP 199
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 DDWCSPG 7
++WC+P
Sbjct: 424 EEWCNPA 430
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 2 DWCSP 6
+WC+P
Sbjct: 195 EWCNP 199
>sp|J1S_HCMVA|UNCHARACTERIZED protein J1S|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DWCSPGQTL 10
D C+PG+ L
Sbjct: 202 DGCAPGRRL 210
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 3 WCSP 6
WC P
Sbjct: 169 WCGP 172
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 DDWCSP 6
++WC+P
Sbjct: 422 EEWCNP 427
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 WCSP 6
WC P
Sbjct: 169 WCGP 172
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DDWCSPGQT 9
D W S G T
Sbjct: 231 DQWHSRGST 239
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DDWCSPGQT 9
D W S G T
Sbjct: 231 DQWHSRGST 239
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DDWCSPGQT 9
D W S G T
Sbjct: 231 DQWHSRGST 239
37|SequenceR|190|181|NPILVDDWCS
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 NPILVDDW 8
NP ++DDW
Sbjct: 396 NPAILDDW 403
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 NPILVDDW 8
NP ++DDW
Sbjct: 396 NPAILDDW 403
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 388 NPTILEDW 395
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 390 NPTILEDW 397
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 NPILVDDW 8
NP+L++ W
Sbjct: 2294 NPVLIETW 2301
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 NPILVDDW 8
NP+LV+ W
Sbjct: 2294 NPLLVETW 2301
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 NPILVDDW-CS 10
NPI+VD + CS
Sbjct: 1660 NPIIVDHYSCS 1670
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 NPILVDDW-CS 10
NPI+VD + CS
Sbjct: 1660 NPIIVDHYSCS 1670
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 NPILVDDW-CS 10
NPI+VD + CS
Sbjct: 1660 NPIIVDHYSCS 1670
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 396 NPAILEDW 403
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 5 VDDWC 9
+DDWC
Sbjct: 13 LDDWC 17
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 NPILVDD 7
NP+LV+D
Sbjct: 109 NPVLVED 115
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 5 VDDWC 9
+DDWC
Sbjct: 13 LDDWC 17
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 NPILVDDW 8
NP ++D+W
Sbjct: 394 NPAILDNW 401
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 5 VDDWCS 10
+DDWC+
Sbjct: 141 IDDWCT 146
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 5 VDDWCS 10
+DDWC+
Sbjct: 141 IDDWCT 146
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VDDWCS 10
+DDWC+
Sbjct: 141 IDDWCT 146
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 393 NPSILEDW 400
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 PILVDD 7
PILVDD
Sbjct: 1915 PILVDD 1920
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 390 NPSVLEDW 397
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 390 NPSVLEDW 397
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PIL-VDDW 8
P+L VDDW
Sbjct: 14 PVLPVDDW 21
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PIL-VDDW 8
P+L VDDW
Sbjct: 14 PVLPVDDW 21
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 NPILVDDWC 9
NP L+D C
Sbjct: 1950 NPTLIDRLC 1958
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 NPILVDDW 8
N L+DDW
Sbjct: 396 NKALLDDW 403
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 NPILVDDW 8
NP +++DW
Sbjct: 391 NPSVLEDW 398
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 NPILVDDWCS 10
NP L+D W S
Sbjct: 2300 NPPLLDRWKS 2309
Query: 2 PILVDDW 8
PI+V +W
Sbjct: 1754 PIVVSNW 1760
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 NPILVDDW 8
N L+DDW
Sbjct: 393 NNTLLDDW 400
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LVDDW 8
L+DDW
Sbjct: 345 LIDDW 349
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 LVDDW 8
L+DDW
Sbjct: 345 LIDDW 349
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 LVDDW 8
L+DDW
Sbjct: 345 LIDDW 349
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 NPILVDDW 8
NP L+++W
Sbjct: 413 NPSLLEEW 420
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 NPILVDDWCS 10
+PI D+CS
Sbjct: 329 SPIWFRDFCS 338
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 NPILVDDWCS 10
+PI D+CS
Sbjct: 329 SPIWFRDFCS 338
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 NPILVDDWCS 10
+PI D+CS
Sbjct: 329 SPIWFRDFCS 338
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 NPILVDDWCS 10
+PI D+CS
Sbjct: 329 SPIWFRDFCS 338
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 NPILVDDW 8
N L+DDW
Sbjct: 395 NKDLLDDW 402
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 PILVDDW 8
PI++D W
Sbjct: 91 PIIIDLW 97
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PILVDD 7
P+LVDD
Sbjct: 2003 PLLVDD 2008
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 PILVDD 7
P+LVDD
Sbjct: 2003 PLLVDD 2008
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 NPILVDDWCS 10
+P DD CS
Sbjct: 2382 DPTTADDTCS 2391
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 4 LVDDW 8
L+DDW
Sbjct: 397 LLDDW 401
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 ILVDDWC 9
++VDD C
Sbjct: 1283 VIVDDLC 1289
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PILVDD 7
PI+VDD
Sbjct: 2373 PIVVDD 2378
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 2 PILVDDW 8
PI VD W
Sbjct: 30 PIAVDLW 36
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 2 PILVDDW 8
PI VD W
Sbjct: 30 PIAVDLW 36
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 PILVDDW 8
PI VD W
Sbjct: 30 PIAVDLW 36
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 PILVDDW 8
PI VD W
Sbjct: 30 PIAVDLW 36
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 PILVDDW 8
P+++ +W
Sbjct: 983 PVMISEW 989
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 PILVDDW 8
P+++ +W
Sbjct: 983 PVMISEW 989
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 PILVDDWCS 10
P L+D W +
Sbjct: 226 PALIDIWST 234
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 PILVDDW 8
PI VD W
Sbjct: 30 PIAVDLW 36
>sp|NS8_SARS2|ORF8 protein|Severe acute respiratory syndrome coronavirus
Query: 2 PILVDDWC 9
P +VDD C
Sbjct: 30 PYVVDDPC 37
38|SequenceR|195|186|EGSMRNPILV
>sp|PB1F2_I40A0|PROTEIN PB1-F2|Influenza A virus (strain A/Hickox/1940
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|PB1F2_I36A0|PROTEIN PB1-F2|Influenza A virus (strain A/Henry/1936
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|PB1F2_I43A0|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|PB1F2_I34A1|PROTEIN PB1-F2|Influenza A virus (strain A/Puerto
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|PB1F2_I35A3|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|PB1F2_I33A0|PROTEIN PB1-F2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|PB1F2_I06A0|PROTEIN PB1-F2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 SMRNPILV 10
S+RNPILV
Sbjct: 63 SLRNPILV 70
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GSMRNPILV 10
GS+RNP+ +
Sbjct: 5 GSLRNPLAI 13
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 GSMRNPILV 10
GS+RNP+ +
Sbjct: 5 GSLRNPLAI 13
>sp|PB1F2_I45A0|PROTEIN PB1-F2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 SMRNPILV 10
S+RNP LV
Sbjct: 63 SLRNPTLV 70
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 EGSMRNPILV 10
EGSM+N +
Sbjct: 278 EGSMKNAFYI 287
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 EGSMRNPILV 10
EGSM+N +
Sbjct: 278 EGSMKNAFYI 287
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 SMRNPIL 9
+MRNP L
Sbjct: 750 NMRNPTL 756
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 EGSMRN 6
EGSM+N
Sbjct: 307 EGSMKN 312
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 GSMRNPIL 9
G M+NP++
Sbjct: 2409 GVMKNPVV 2416
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 SMRNPIL 9
+MRNP L
Sbjct: 750 NMRNPTL 756
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 EGSMRN 6
EGSM+N
Sbjct: 280 EGSMKN 285
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 284 EGTPKDPIL 292
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 GSMRNPIL 9
G M+NP++
Sbjct: 2411 GIMKNPVV 2418
Query: 2 GSMRNPI 8
GS++NP+
Sbjct: 885 GSVKNPM 891
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 GSMRNPIL 9
G M+NP++
Sbjct: 2411 GIMKNPVV 2418
Query: 2 GSMRNPI 8
GS++NP+
Sbjct: 885 GSVKNPM 891
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 GSMRNPIL 9
G M+NP++
Sbjct: 2407 GIMKNPVV 2414
Query: 2 GSMRNPI 8
GS++NP+
Sbjct: 881 GSVKNPM 887
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 284 EGTPKDPIL 292
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 284 EGTPKDPIL 292
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 284 EGTPKDPIL 292
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 284 EGTPKDPIL 292
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 284 EGTPKDPIL 292
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 EGSMRNPIL 9
EG+ ++PIL
Sbjct: 291 EGTPKDPIL 299
>sp|NSP4_ROTB2|NON-STRUCTURAL glycoprotein 4|Rotavirus X (isolate
Query: 1 EGSMRNPIL 9
EG+ +PIL
Sbjct: 2 EGTSESPIL 10
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 1 EGSMRNPIL 9
EG+ + PIL
Sbjct: 297 EGTPKEPIL 305
39|SequenceR|200|191|HPSQCEGSMR
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 3 SQCEGSM 9
SQC GS+
Sbjct: 69 SQCTGSV 75
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 SQCEGSMR 10
S C GS+R
Sbjct: 573 SPCMGSLR 580
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SQCEGSMR 10
S C GS+R
Sbjct: 573 SPCMGSLR 580
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 PSQCEGSM 9
P+QC G +
Sbjct: 591 PAQCYGRL 598
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 PSQCEGSM 9
P+QC G +
Sbjct: 588 PAQCYGRL 595
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 1 HPSQCEGSM 9
HP C G +
Sbjct: 28 HPCACTGEL 36
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 HPSQCE 6
HP+ CE
Sbjct: 695 HPTACE 700
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 HPSQCEGSM 9
HP CE S+
Sbjct: 299 HPELCELSI 307
40|SequenceR|205|196|STGPCHPSQC
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 STGPCHPSQC 10
+ GPC P C
Sbjct: 965 AMGPCQPGDC 974
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 GPCHPSQC 10
GPC P C
Sbjct: 949 GPCEPGDC 956
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPCH 6
TGPCH
Sbjct: 233 TGPCH 237
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCAPS 2073
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 GPCHPSQC 10
GPC P C
Sbjct: 965 GPCEPGDC 972
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 GPCHPSQC 10
GPC P C
Sbjct: 956 GPCEPGDC 963
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 GPCHPSQC 10
GPC P C
Sbjct: 956 GPCEPGDC 963
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 GPCHPSQC 10
GPC P C
Sbjct: 952 GPCEPGDC 959
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 STGPCHPS 8
+TGPC PS
Sbjct: 2066 TTGPCTPS 2073
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CHPSQC 10
C P+QC
Sbjct: 199 CPPNQC 204
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 STGPCHP 7
+TGPC P
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 STGPCHP 7
+TGPC P
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 STGPCHP 7
+TGPC P
Sbjct: 2066 TTGPCTP 2072
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 STGPCHPSQC 10
S GP + ++C
Sbjct: 272 SLGPVYATRC 281
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPCH 6
TGPC+
Sbjct: 234 TGPCN 238
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 238 TGPC 241
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 237 TGPC 240
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 232 TGPC 235
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 239 TGPC 242
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 232 TGPC 235
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 241 TGPC 244
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 243 TGPC 246
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 248 TGPC 251
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 247 TGPC 250
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 234 TGPC 237
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 234 TGPC 237
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 248 TGPC 251
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 233 TGPC 236
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 STGPCHPSQ 9
+T PC P Q
Sbjct: 1131 ATLPCIPEQ 1139
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 GPCHPS 8
GP HPS
Sbjct: 64 GPLHPS 69
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 231 TGPC 234
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 227 TGPC 230
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 3 GPCHPS 8
GP HPS
Sbjct: 64 GPLHPS 69
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 249 TGPC 252
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 241 TGPC 244
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 238 TGPC 241
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 237 TGPC 240
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 244 TGPC 247
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TGPC 5
TGPC
Sbjct: 236 TGPC 239
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 TGPCHPSQC 10
G CH ++C
Sbjct: 780 VGECHVNRC 788
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 TGPCHPSQ 9
TGPC S+
Sbjct: 263 TGPCSESE 270
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 TGPC 5
TGPC
Sbjct: 144 TGPC 147
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 TGPCHPSQC 10
G CH ++C
Sbjct: 780 VGECHVNRC 788
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 TGPC 5
TGPC
Sbjct: 144 TGPC 147
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 TGPC 5
TGPC
Sbjct: 144 TGPC 147
41|SequenceR|210|201|FFFEASTGPC
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 92 LFETSVKPC 100
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 95 LFETSIKPC 103
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 92 LFETSIKPC 100
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 92 LFETSIKPC 100
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 90 LFETSIKPC 98
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 93 LFETSIKPC 101
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 93 LFETSIKPC 101
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 93 LFETSIKPC 101
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 94 LFETSIKPC 102
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 93 LFETSIKPC 101
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 93 LFETSIKPC 101
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 92 LFETSIKPC 100
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 FFEASTGPC 10
FE S PC
Sbjct: 92 LFETSIKPC 100
>sp|TRX1_EBVB9|TRIPLEX capsid protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FFEASTGPC 10
FF++S G C
Sbjct: 279 FFQSSRGHC 287
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 FFFEASTGP 9
FF A+ GP
Sbjct: 213 FFVTANDGP 221
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 FFFEASTGP 9
FF A+ GP
Sbjct: 213 FFVTANDGP 221
>sp|UL24_HHV6Z|PROTEIN UL24 homolog|Human herpesvirus 6B (strain Z29)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 55 FFEVRLGP 62
>sp|UL24_HHV6U|PROTEIN UL24 homolog|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 55 FFEVRLGP 62
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 1 FFFEASTGP 9
+F+ TGP
Sbjct: 99 YFYYTGTGP 107
>sp|EAD_EBVB9|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 FEASTGP 9
+EA TGP
Sbjct: 219 YEAFTGP 225
>sp|EAD_EBVA8|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 FEASTGP 9
+EA TGP
Sbjct: 219 YEAFTGP 225
>sp|EAD_EBVG|DNA polymerase processivity factor BMRF1|Epstein-Barr virus (strain
Query: 3 FEASTGP 9
+EA TGP
Sbjct: 219 YEAFTGP 225
>sp|UL24_HHV6G|PROTEIN UL24 homolog|Human herpesvirus 6A (strain GS)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 55 FFEVRLGP 62
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 603 FFELVNGP 610
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 603 FFELVNGP 610
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 603 FFELVNGP 610
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 3 FEASTGP 9
FEA+ GP
Sbjct: 320 FEAACGP 326
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FFFEASTG 8
FF A+TG
Sbjct: 531 LFFSAATG 538
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FFFEASTG 8
FF A+TG
Sbjct: 531 LFFSAATG 538
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 FFFEASTGP 9
+F+ TGP
Sbjct: 124 YFYYLGTGP 132
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 FFFEASTGP 9
+F+ TGP
Sbjct: 109 YFYYLGTGP 117
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FFEASTGP 9
FFE GP
Sbjct: 584 FFELVNGP 591
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 1 FFFEASTGP 9
+F+ TGP
Sbjct: 110 YFYYLGTGP 118
42|SequenceR|215|206|HAGCKFFFEA
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 AGCKFFFE 9
AGC +FF+
Sbjct: 63 AGCLYFFQ 70
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 AGCKFFFE 9
AGC +FF+
Sbjct: 63 AGCLYFFQ 70
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 HAGCKFFF 8
+ GCKF F
Sbjct: 162 YRGCKFIF 169
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 HAGCKFFFEA 10
H G +FF EA
Sbjct: 160 HKGQQFFGEA 169
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 AGCKFFFE 9
AGC +FE
Sbjct: 12 AGCTGWFE 19
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 3 GCKFF 7
GC FF
Sbjct: 257 GCSFF 261
43|SequenceR|220|211|KDSTPHAGCK
>sp|VE6_HPV18|PROTEIN E6|Human papillomavirus type 18
Query: 1 KDSTPHAGC 9
+DS PHA C
Sbjct: 57 RDSIPHAAC 65
>sp|VE6_HPV26|PROTEIN E6|Human papillomavirus type 26
Query: 1 KDSTPHAGCK 10
+D +P+A CK
Sbjct: 55 RDRSPYAACK 64
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 DSTPHAGC 9
D TPH C
Sbjct: 2949 DGTPHPYC 2956
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 DSTPHAGC 9
D TPH C
Sbjct: 2969 DGTPHPYC 2976
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 DSTPHAGC 9
D TPH C
Sbjct: 2999 DGTPHPYC 3006
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 DSTPHAGC 9
D TPH C
Sbjct: 2949 DGTPHPYC 2956
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 DSTPHAGC 9
D TPH C
Sbjct: 2969 DGTPHPYC 2976
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 DSTPHAGC 9
D TPH C
Sbjct: 2999 DGTPHPYC 3006
>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31
Query: 1 KDSTPHAGC 9
+D TPH C
Sbjct: 55 RDDTPHGVC 63
>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51
Query: 1 KDSTPHAGCK 10
+D+ P+A CK
Sbjct: 55 RDNNPYAVCK 64
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 3 STPHAGC 9
STP GC
Sbjct: 628 STPRRGC 634
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 KDSTPHAGCK 10
K+ST H CK
Sbjct: 935 KNSTAHVRCK 944
>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40
Query: 1 KDSTPHAGC 9
+D PHA C
Sbjct: 55 RDDFPHAAC 63
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 4 TPHAGCK 10
T HA CK
Sbjct: 359 TAHADCK 365
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DSTPHAGC 9
D T H GC
Sbjct: 266 DGTFHQGC 273
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DSTPHAGC 9
D T H GC
Sbjct: 266 DGTFHQGC 273
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 3 STPHAGC 9
STP GC
Sbjct: 127 STPSHGC 133
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 DSTPHAGC 9
D T HA C
Sbjct: 4669 DQTYHANC 4676
44|SequenceR|225|216|AVSTEKDSTP
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 AVSTEKDSTP 10
AV+ +KD+TP
Sbjct: 455 AVTCQKDTTP 464
45|SequenceR|230|221|AILHLAVSTE
***** No hits found ******
46|SequenceR|235|226|NRSNTAILHL
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 NRSNTAILHL 10
NR T LHL
Sbjct: 381 NRGGTGSLHL 390
>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 NRSNTAILH 9
NR + ++LH
Sbjct: 157 NREDNSLLH 165
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 NRSNTAILH 9
NRS +LH
Sbjct: 430 NRSQIQVLH 438
47|SequenceR|240|231|TICTINRSNT
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 2 ICTINRSN 9
+CT+N+S+
Sbjct: 91 LCTLNKSH 98
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 3 CTINRS 8
CT+NRS
Sbjct: 123 CTLNRS 128
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 ICTINRSNT 10
+CT N +NT
Sbjct: 1303 VCTDNSANT 1311
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 ICTINRSNT 10
+CT N +NT
Sbjct: 1303 VCTDNSANT 1311
48|SequenceR|245|236|RVDTCTICTI
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 DTCTICT 9
D C +CT
Sbjct: 124 DVCAVCT 130
>sp|ICP0_HHV11|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 1 (strain 17)
Query: 3 DTCTICT 9
D C +CT
Sbjct: 114 DVCAVCT 120
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 RVDTCTIC 8
R +TC IC
Sbjct: 1173 RHETCVIC 1180
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RVDTCTIC 8
R +TC IC
Sbjct: 1173 RHETCVIC 1180
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RVDTCTIC 8
R +TC IC
Sbjct: 1173 RHETCVIC 1180
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 3 DTCTIC 8
D CT+C
Sbjct: 415 DACTMC 420
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 DTCTIC 8
D CT+C
Sbjct: 436 DACTMC 441
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VDTCTIC 8
V+TCT C
Sbjct: 1207 VNTCTQC 1213
>sp|V55B_HHV7J|UNCHARACTERIZED protein U55B|Human herpesvirus 7 (strain JI)
Query: 5 CTICTI 10
CT+C++
Sbjct: 170 CTVCSV 175
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 4 TCTIC 8
TCTIC
Sbjct: 152 TCTIC 156
>sp|TRM1_HHV6U|TRIPARTITE terminase subunit 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RVDTCT 6
RVD+CT
Sbjct: 501 RVDSCT 506
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 VDTCTI 7
VDTC+I
Sbjct: 1139 VDTCSI 1144
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 DTCTIC 8
D CT+C
Sbjct: 417 DACTMC 422
>sp|TRM1_HHV6Z|TRIPARTITE terminase subunit 1|Human herpesvirus 6B (strain Z29)
Query: 1 RVDTCT 6
RVD+CT
Sbjct: 501 RVDSCT 506
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 VDTCTI 7
VDTC+I
Sbjct: 1139 VDTCSI 1144
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 VDTCTI 7
VDTC+I
Sbjct: 1139 VDTCSI 1144
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain
Query: 3 DTCTIC 8
+TCTIC
Sbjct: 17 NTCTIC 22
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 VDTCTIC 8
VD C IC
Sbjct: 1382 VDGCLIC 1388
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 3 DTCTIC 8
D CT+C
Sbjct: 414 DACTMC 419
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 RVDTCTIC 8
RV+ CT C
Sbjct: 475 RVEPCTTC 482
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 DTCTIC 8
+TCT C
Sbjct: 1420 ETCTAC 1425
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 DTCTIC 8
+TCT C
Sbjct: 1420 ETCTAC 1425
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 DTCTIC 8
+TCT C
Sbjct: 1420 ETCTAC 1425
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 RVDTCTIC 8
RV+ CT C
Sbjct: 475 RVEPCTTC 482
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 VDTCTICT 9
V +C ICT
Sbjct: 1799 VLSCRICT 1806
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 TCTICT 9
TC +CT
Sbjct: 38 TCNVCT 43
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 TCTICT 9
TC +CT
Sbjct: 38 TCNVCT 43
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 DTCTIC 8
D C +C
Sbjct: 1535 DVCAVC 1540
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 5 CTIC 8
CTIC
Sbjct: 566 CTIC 569
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RVDTCTIC 8
+ TCTIC
Sbjct: 732 KPQTCTIC 739
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 VDTCT 6
+DTCT
Sbjct: 200 IDTCT 204
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 CTIC 8
CTIC
Sbjct: 556 CTIC 559
49|SequenceR|250|241|VLVPSRVDTC
>sp|VE7_HPV04|PROTEIN E7|Human papillomavirus 4
Query: 3 VPSRVDTC 10
VP R+DTC
Sbjct: 46 VPFRIDTC 53
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 VLVPSRV 7
+LVP+RV
Sbjct: 1718 ILVPTRV 1724
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 1 VLVPSRVDT 9
V VPS +DT
Sbjct: 481 VAVPSALDT 489
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 1 VLVPSRVDT 9
V VPS +DT
Sbjct: 479 VAVPSALDT 487
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 VLVPSRV 7
+L PSRV
Sbjct: 1718 ILAPSRV 1724
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 4 PSRVDTC 10
PSR D C
Sbjct: 215 PSRNDNC 221
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 4 PSRVDTC 10
PSR D C
Sbjct: 223 PSRNDNC 229
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 4 PSRVDTC 10
PSR D C
Sbjct: 223 PSRNDNC 229
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 4 PSRVDTC 10
PSR D C
Sbjct: 223 PSRNDNC 229
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 1 VLVPSRVD 8
VLVPSR
Sbjct: 46 VLVPSRAS 53
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 1 VLVPSRVD 8
VLVPSR
Sbjct: 46 VLVPSRAS 53
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 1 VLVPSRVDT 9
V VP VDT
Sbjct: 377 VTVPGLVDT 385
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 1 VLVPSRVD 8
VLVPSR
Sbjct: 46 VLVPSRAS 53
50|SequenceR|255|246|SNCQFVLVPS
>sp|UL91_HHV7J|PROTEIN U62|Human herpesvirus 7 (strain JI)
Query: 2 NCQFVLVP 9
NC F+L P
Sbjct: 30 NCDFILEP 37
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 SNCQFV 6
+NCQF+
Sbjct: 926 NNCQFI 931
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 SNCQFV 6
+NCQF+
Sbjct: 926 NNCQFI 931
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NCQFVLVPS 10
NC L+PS
Sbjct: 541 NCLLTLLPS 549
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NCQFVLVPS 10
NC L+PS
Sbjct: 541 NCLLTLLPS 549
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 NCQFVLV 8
NCQF+ V
Sbjct: 765 NCQFLAV 771
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 NCQFVLV 8
NCQF+ V
Sbjct: 765 NCQFLAV 771
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 NCQFVLVPS 10
NC ++++PS
Sbjct: 248 NCYYLVLPS 256
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CQFVLVP 9
C F+ VP
Sbjct: 131 CNFITVP 137
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CQFVLVP 9
C F+ VP
Sbjct: 131 CNFITVP 137
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 SNCQFVLVP 9
+NC ++VP
Sbjct: 257 NNCATIIVP 265
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 SNCQFVLVP 9
+NC ++VP
Sbjct: 257 NNCATIIVP 265
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 SNCQFVLVP 9
+NC ++VP
Sbjct: 257 NNCATIIVP 265
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 SNCQFVLVP 9
+NC ++VP
Sbjct: 257 NNCATIIVP 265
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 SNCQFVLVP 9
+NC ++VP
Sbjct: 257 NNCATIIVP 265
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SNCQFVLVPS 10
+ +FVL+P+
Sbjct: 324 TGGEFVLIPT 333
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 CQFVLVPS 10
C FV +P+
Sbjct: 682 CSFVPIPA 689
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 SNCQFVLVP 9
S C F ++P
Sbjct: 201 SFCNFYIIP 209
51|SequenceR|260|251|CIVHRSNCQF
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CIVHRSN 7
CI+HRS+
Sbjct: 37 CIIHRSS 43
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 1 CIVHRSN 7
CI+HRS+
Sbjct: 25 CIIHRSS 31
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 1 CIVHRSNCQF 10
C+ H S C +
Sbjct: 267 CLTHASTCSY 276
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 1 CIVHRSNCQF 10
C+ H S C +
Sbjct: 276 CLTHASTCSY 285
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CIVHRSNCQF 10
C+ HR C F
Sbjct: 5382 CVDHRPVCSF 5391
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 1 CIVHRSNCQF 10
C+ H S C +
Sbjct: 260 CLAHASTCSY 269
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 4 HRSNCQF 10
H SNC F
Sbjct: 232 HSSNCLF 238
>sp|E3_YLDV|PROTEIN E3 homolog|Yaba-like disease virus (YLDV)
Query: 1 CIVHRSNCQF 10
CIV CQF
Sbjct: 114 CIVLNEYCQF 123
>sp|PG034_VAR67|PROTEIN OPG034|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CIVHRSN 7
CI+H+S+
Sbjct: 25 CIIHQSS 31
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 CIVHRSNC 8
C+ H S C
Sbjct: 228 CVCHNSTC 235
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 CIVHRSNC 8
C+ H S C
Sbjct: 228 CVCHNSTC 235
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 3 VHRSNC 8
+HRS C
Sbjct: 580 LHRSQC 585
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 IVHRSN 7
+VH+SN
Sbjct: 175 VVHKSN 180
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IVHRSN 7
+VH+SN
Sbjct: 175 VVHKSN 180
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IVHRSN 7
+VH+SN
Sbjct: 175 VVHKSN 180
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 2 IVHRSN 7
+VH+SN
Sbjct: 175 VVHKSN 180
52|SequenceR|265|256|HFCDLCIVHR
>sp|VE6_HPV68|PROTEIN E6|Human papillomavirus 68
Query: 2 FCDLCIVHR 10
F DLC+V+R
Sbjct: 49 FSDLCVVYR 57
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 CDLCIVHR 10
C+LC HR
Sbjct: 538 CNLCTPHR 545
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 CDLCIVHR 10
C+LC HR
Sbjct: 536 CNLCTPHR 543
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 3 CDLCIVHR 10
C+LC HR
Sbjct: 569 CNLCTPHR 576
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 3 CDLCIVHR 10
C+LC HR
Sbjct: 569 CNLCTPHR 576
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 CDLCIVHR 10
C+LC HR
Sbjct: 553 CNLCTPHR 560
>sp|VE6_HPV16|PROTEIN E6|Human papillomavirus type 16
Query: 2 FCDLCIVHR 10
F DLCIV+R
Sbjct: 54 FRDLCIVYR 62
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 HFCDLC 6
H C+LC
Sbjct: 239 HLCNLC 244
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 1 HFCDLC 6
H C+LC
Sbjct: 239 HLCNLC 244
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 1 HFCDLC 6
H C+LC
Sbjct: 239 HLCNLC 244
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 1 HFCDLC 6
H C+LC
Sbjct: 239 HLCNLC 244
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 1 HFCDLC 6
H C+LC
Sbjct: 239 HLCNLC 244
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 DLCIVHR 10
DLC +HR
Sbjct: 2207 DLCGIHR 2213
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 2 FCDLCIVHR 10
F DLC+V+R
Sbjct: 48 FRDLCVVYR 56
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 3 CDLCIVHR 10
C LC++H+
Sbjct: 261 CLLCLLHK 268
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 HFCDLCIVHR 10
HF + C+V R
Sbjct: 333 HFLEACLVLR 342
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 FCDLCIV 8
FC LC++
Sbjct: 3595 FCALCVI 3601
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 FCDLCIV 8
FC LC++
Sbjct: 3595 FCALCVI 3601
Query: 4 DLCIVH 9
D CI+H
Sbjct: 4669 DRCIIH 4674
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 DLCIVHR 10
D CIV+R
Sbjct: 1908 DYCIVYR 1914
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 4 DLCIVHR 10
D CIV+R
Sbjct: 1899 DYCIVYR 1905
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 4 DLCIVHR 10
D CIV+R
Sbjct: 1900 DYCIVYR 1906
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 3 CDLCIVH 9
CD+ +VH
Sbjct: 264 CDVSVVH 270
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FCDLCIVHR 10
FC C++ R
Sbjct: 164 FCGACVITR 172
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 FCDLCIVHR 10
FC C++ R
Sbjct: 164 FCGACVITR 172
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 4 DLCIVH 9
DLC++H
Sbjct: 177 DLCLLH 182
>sp|VE6_HPV45|PROTEIN E6|Human papillomavirus 45
Query: 2 FCDLCIVHR 10
F DLCIV+R
Sbjct: 49 FKDLCIVYR 57
>sp|PG031_VAR67|PROTEIN C4|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 FCDLCIVH 9
F DLC+ H
Sbjct: 220 FADLCMDH 227
>sp|PG034_MONPV|PROTEIN OPG034|Monkeypox virus (MPXV)
Query: 6 CIVHR 10
CI+HR
Sbjct: 25 CIIHR 29
>sp|E1A_ADE07|EARLY E1A protein|Human adenovirus B serotype 7
Query: 1 HFCDLCIVHR 10
H C C HR
Sbjct: 161 HGCKSCEFHR 170
>sp|PG034_VACCC|PROTEIN OPG034|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 CIVHR 10
CI+HR
Sbjct: 37 CIIHR 41
>sp|PG031_VACCC|PROTEIN C4|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 FCDLCIVH 9
F DLC+ H
Sbjct: 220 FADLCMDH 227
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 HFCDLCIVH 9
H D C++H
Sbjct: 878 HKVDNCVIH 886
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 DLCIVH 9
D+C++H
Sbjct: 4342 DMCVIH 4347
>sp|V_PI4HB|NON-STRUCTURAL protein V|Human parainfluenza 4b virus (strain
Query: 3 CDLCI 7
C+LCI
Sbjct: 222 CELCI 226
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 3 CDLCI 7
C+LCI
Sbjct: 222 CELCI 226
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HFCDLCIVH 9
HF +L +VH
Sbjct: 4739 HFRELGVVH 4747
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain GD1)
Query: 2 FCDLCIVHR 10
FC L +H+
Sbjct: 211 FCQLVYLHK 219
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 FCDLCIVHR 10
FC L +H+
Sbjct: 211 FCQLVYLHK 219
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 2 FCDLCIVHR 10
FC L +H+
Sbjct: 211 FCQLVYLHK 219
>sp|Z_SABVB|RING finger protein Z|Sabia mammarenavirus (isolate
Query: 2 FCDLC 6
FCD+C
Sbjct: 75 FCDIC 79
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CDLCIVH 9
CD+ +VH
Sbjct: 264 CDVPVVH 270
>sp|VE6_HPV33|PROTEIN E6|Human papillomavirus 33
Query: 2 FCDLCIVHR 10
F DL +V+R
Sbjct: 47 FADLTVVYR 55
>sp|VE5_HPV41|PROBABLE protein E5|Human papillomavirus type 41
Query: 3 CDLCIVHR 10
CDLCI+ +
Sbjct: 28 CDLCIIKQ 35
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 HFCDLCIVH 9
HF +L +VH
Sbjct: 4716 HFRELGVVH 4724
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 DLCIVH 9
D CI+H
Sbjct: 195 DSCIIH 200
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 DLCIVH 9
D CI+H
Sbjct: 195 DSCIIH 200
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 HFCDLC 6
HF D C
Sbjct: 650 HFIDYC 655
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 HFCDLC 6
HF D C
Sbjct: 650 HFIDYC 655
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 FCDLCI 7
F DLC+
Sbjct: 1782 FLDLCV 1787
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 2 FCDLCI 7
F DLC+
Sbjct: 1781 FLDLCV 1786
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 HFCDLC 6
HF D C
Sbjct: 650 HFIDYC 655
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 FCDLCIV 8
F DLC++
Sbjct: 1774 FLDLCVL 1780
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 HFCDLC 6
HF D C
Sbjct: 650 HFIDYC 655
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 CDLCIVH 9
CD CI +
Sbjct: 1423 CDQCIAN 1429
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 1 HFCDLCIVHR 10
H C C HR
Sbjct: 156 HGCKSCEFHR 165
>sp|VIRF1_HHV8P|VIRF-1 herpesvirus 8 type P
Query: 1 HFCDLCIV 8
+F D C+V
Sbjct: 429 NFSDACVV 436
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 CDLCIVH 9
CD CI +
Sbjct: 1422 CDQCIAN 1428
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 2 FCDLCIVHR 10
+C + +VHR
Sbjct: 478 YCPMRLVHR 486
53|SequenceR|270|261|TVCYLHFCDL
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 TVCYLHFC 8
TVC HFC
Sbjct: 374 TVCASHFC 381
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 TVCYLHFC 8
TVC HFC
Sbjct: 376 TVCASHFC 383
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 4 YLHFCDL 10
Y+HFC +
Sbjct: 634 YIHFCKI 640
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 YLHFCDL 10
Y+HFC +
Sbjct: 634 YIHFCKI 640
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 4 YLHFCDL 10
Y+HFC +
Sbjct: 634 YIHFCKI 640
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YLHFCDL 10
Y+HFC +
Sbjct: 634 YIHFCKI 640
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 4 YLHFCDL 10
Y+HFC +
Sbjct: 634 YIHFCKI 640
>sp|PG055_VARV|PROTEIN OPG055|Variola virus
Query: 4 YLHFCDL 10
+LH+C+L
Sbjct: 264 FLHYCNL 270
>sp|PG055_VAR67|PROTEIN OPG055|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 YLHFCDL 10
+LH+C+L
Sbjct: 264 FLHYCNL 270
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 4 YLHFC 8
Y+HFC
Sbjct: 634 YIHFC 638
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 CYLHF 7
CY+HF
Sbjct: 409 CYIHF 413
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 3 CYLHF 7
CY+HF
Sbjct: 410 CYVHF 414
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 TVCYLHFCDL 10
++CY+H+ D+
Sbjct: 128 SMCYVHWRDI 137
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 2 VCYLHFCD 9
VC + FC+
Sbjct: 237 VCKMKFCN 244
>sp|PG204_MONPV|SOLUBLE interferon alpha/beta receptor OPG204|Monkeypox virus (MPXV)
Query: 3 CYLHFCDL 10
CY+H+ D+
Sbjct: 221 CYVHYDDV 228
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 3 CYLHFCDL 10
CY+H+ D+
Sbjct: 223 CYVHYDDV 230
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 3 CYLHFCDL 10
CY+H+ D+
Sbjct: 224 CYVHYDDV 231
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 3 CYLHFCDL 10
CY+H+ D+
Sbjct: 224 CYVHYDDV 231
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 3 CYLHFCDL 10
CY+H+ D+
Sbjct: 221 CYVHYDDV 228
>sp|PG055_VACCP|PROTEIN OPG055|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 YLHFCD 9
+LH+C+
Sbjct: 260 FLHYCN 265
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YLHFCD 9
+LH+C+
Sbjct: 264 FLHYCN 269
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 4 YLHFCD 9
+LH+C+
Sbjct: 264 FLHYCN 269
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VCYLHFC 8
VC+LH C
Sbjct: 264 VCWLHEC 270
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 VCYLHFC 8
VC+LH C
Sbjct: 264 VCWLHEC 270
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VCYLHFC 8
VC+LH C
Sbjct: 264 VCWLHEC 270
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 VCYLHFC 8
VC+LH C
Sbjct: 264 VCWLHEC 270
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 VCYLHFC 8
VC+LH C
Sbjct: 264 VCWLHEC 270
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 4 YLHFC 8
YL+FC
Sbjct: 459 YLYFC 463
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 4 YLHFC 8
YL+FC
Sbjct: 467 YLYFC 471
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 VCYLHFCD 9
VC FC+
Sbjct: 130 VCEFQFCN 137
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 TVCYLHFCDL 10
+V LH+C +
Sbjct: 116 SVVRLHYCSM 125
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CYLHF 7
CYL+F
Sbjct: 225 CYLNF 229
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 3 CYLHF 7
CYL+F
Sbjct: 219 CYLNF 223
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 TVCYLHFC 8
TVC LH+
Sbjct: 70 TVCALHWA 77
54|SequenceR|275|266|RDNLRTVCYL
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 RDNLRTVCY 9
RD LR +C+
Sbjct: 1569 RDRLRRLCF 1577
Query: 3 NLRTVCYL 10
NL+ CYL
Sbjct: 1692 NLKLFCYL 1699
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 RDNLRTVCY 9
RD LR +C+
Sbjct: 1570 RDRLRRLCF 1578
Query: 3 NLRTVCYL 10
NL+ CYL
Sbjct: 1693 NLKLFCYL 1700
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 RDNLRTVCY 9
RD LR +C+
Sbjct: 1569 RDRLRRLCF 1577
Query: 3 NLRTVCYL 10
NL+ CYL
Sbjct: 1692 NLKLFCYL 1699
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 RDNLRT 6
RDN+RT
Sbjct: 185 RDNIRT 190
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 RDNLRTVCY 9
RD RTV Y
Sbjct: 465 RDEARTVSY 473
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RDNLRTVCY 9
RD RTV Y
Sbjct: 471 RDEARTVSY 479
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RDNLRTVCY 9
RD RTV Y
Sbjct: 469 RDEARTVSY 477
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 3 NLRTVCYL 10
N+R CY+
Sbjct: 189 NIRNACYI 196
>sp|VE7_HPV68|PROTEIN E7|Human papillomavirus 68
Query: 1 RDNLRTV 7
RDNLRT+
Sbjct: 84 RDNLRTL 90
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 2 DNLRTVCYL 10
DNL +C L
Sbjct: 47 DNLEAMCQL 55
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 2 DNLRTVCYL 10
DNL +C L
Sbjct: 47 DNLEAMCQL 55
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 763 DDLRSLC 769
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 758 DDLRSLC 764
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 DNLRTVCYL 10
DN VC+L
Sbjct: 1969 DNAHHVCWL 1977
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 749 DDLRSLC 755
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 758 DDLRSLC 764
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 746 DDLRSLC 752
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 753 DDLRSLC 759
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 758 DDLRSLC 764
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 758 DDLRSLC 764
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 751 DDLRSLC 757
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 758 DDLRSLC 764
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 744 DDLRSLC 750
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 756 DDLRSLC 762
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 758 DDLRSLC 764
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 DNLRTVCYL 10
DNL+ C L
Sbjct: 2112 DNLKVPCQL 2120
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 DNLRTVCYL 10
DNL+ C L
Sbjct: 2112 DNLKVPCQL 2120
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 DNLRTVCYL 10
DNL+ C L
Sbjct: 2112 DNLKVPCQL 2120
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 752 DDLRSLC 758
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 3 NLRTVCYL 10
N+R CY+
Sbjct: 192 NIRNCCYI 199
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 RDNLRTVCYL 10
R N VC+L
Sbjct: 445 RSNHNNVCWL 454
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 749 DDLRSLC 755
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 745 DDLRSLC 751
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 754 DDLRSLC 760
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 3 NLRTVCYL 10
N+R CY+
Sbjct: 193 NIRNCCYI 200
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 755 DDLRSLC 761
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 770 DDLRSLC 776
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DNLRTVC 8
D+LR++C
Sbjct: 757 DDLRSLC 763
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 DNLRTVCY 9
DNL +C+
Sbjct: 882 DNLAEICF 889
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 DNLRTVCYL 10
DNL+ C L
Sbjct: 2112 DNLKIPCQL 2120
>sp|PG039_VARV|TRUNCATED interferon antagonist OPG039|Variola virus
Query: 2 DNLRTVCYL 10
+N+R VC L
Sbjct: 41 NNMRLVCTL 49
>sp|PG039_VAR67|TRUNCATED interferon antagonist OPG039|Variola virus (isolate
Query: 2 DNLRTVCYL 10
+N+R VC L
Sbjct: 41 NNMRLVCTL 49
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DNLRTVCY 9
D L+T+C+
Sbjct: 444 DALKTLCH 451
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DNLRTVCY 9
D L+T+C+
Sbjct: 444 DALKTLCH 451
>sp|PG039_VACCC|INTERFERON antagonist OPG040|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DNLRTVCYL 10
+N+R VC L
Sbjct: 41 NNVRLVCTL 49
>sp|PG039_MONPV|INTERFERON antagonist OPG039|Monkeypox virus (MPXV)
Query: 2 DNLRTVCYL 10
+N+R VC L
Sbjct: 41 NNVRLVCTL 49
55|SequenceR|280|271|DHVFQRDNLR
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2984 DHWFSREN 2991
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2984 DHWFSREN 2991
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2984 DHWFSREN 2991
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2984 DHWFSREN 2991
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2984 DHWFSREN 2991
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2986 DHWFSREN 2993
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2983 DHWFSREN 2990
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2986 DHWFSREN 2993
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2986 DHWFSREN 2993
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2986 DHWFSREN 2993
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2986 DHWFSREN 2993
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2987 DHWFSREN 2994
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2986 DHWFSREN 2993
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2987 DHWFSREN 2994
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 DHVFQRDNL 9
DHV DNL
Sbjct: 1616 DHVHPHDNL 1624
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 DHVFQRDNL 9
DHV DNL
Sbjct: 1616 DHVHPHDNL 1624
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2982 DHWFGREN 2989
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2982 DHWFGREN 2989
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2982 DHWFGREN 2989
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2982 DHWFGREN 2989
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DHVFQRDN 8
DH F R+N
Sbjct: 2982 DHWFGREN 2989
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 HVFQRDN 8
+VFQR N
Sbjct: 293 NVFQRSN 299
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 DHVFQRDN 8
DH F R N
Sbjct: 2986 DHWFSRGN 2993
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 1 DHVFQRDNL 9
DH++ ++NL
Sbjct: 508 DHLYIKNNL 516
56|SequenceR|285|276|YGLQPDHVFQ
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 2 GLQPDHVFQ 10
GL+PD VFQ
Sbjct: 53 GLRPDGVFQ 61
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 2 GLQPDHVFQ 10
GL+PD VFQ
Sbjct: 151 GLRPDGVFQ 159
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 LQPDHV 8
LQPDH+
Sbjct: 137 LQPDHI 142
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 YGLQPDHV 8
YGL DH+
Sbjct: 27 YGLNTDHI 34
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 YGLQPDHV 8
YGL DH+
Sbjct: 27 YGLNTDHI 34
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YGLQPDHV 8
YGL DH+
Sbjct: 27 YGLNTDHI 34
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YGLQPDHV 8
YGL DH+
Sbjct: 27 YGLNTDHI 34
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 YGLQPDHV 8
YGL DH+
Sbjct: 27 YGLNTDHI 34
>sp|CAP8_ADE12|PRE-HEXON-LINKING protein VIII|Human adenovirus A serotype 12
Query: 2 GLQPDHVFQ 10
G++PD VFQ
Sbjct: 151 GVRPDGVFQ 159
>sp|CAP8_ADE02|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 2
Query: 2 GLQPDHVFQ 10
GL+PD FQ
Sbjct: 145 GLRPDGTFQ 153
>sp|CAP8_ADE05|PRE-HEXON-LINKING protein VIII|Human adenovirus C serotype 5
Query: 2 GLQPDHVFQ 10
GL+PD FQ
Sbjct: 145 GLRPDGTFQ 153
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 GLQPDHVF 9
G PDH F
Sbjct: 2109 GFLPDHQF 2116
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 GLQPDHVF 9
G PDH F
Sbjct: 2109 GFLPDHQF 2116
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 GLQPDHVF 9
G PDH F
Sbjct: 2109 GFLPDHQF 2116
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QPDHV 8
QPDH+
Sbjct: 191 QPDHI 195
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QPDHV 8
QPDH+
Sbjct: 191 QPDHI 195
>sp|CAP8_ADE40|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 40
Query: 2 GLQPDHVFQ 10
G +PD VFQ
Sbjct: 151 GPRPDGVFQ 159
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 5 PDHVFQ 10
PDH F+
Sbjct: 106 PDHTFK 111
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 3 LQPDHV 8
L+PDH+
Sbjct: 470 LRPDHL 475
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 3 LQPDHV 8
L+PDH+
Sbjct: 474 LRPDHL 479
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 3 LQPDHV 8
L+PDH+
Sbjct: 473 LRPDHL 478
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 YGLQPDHV 8
YG+ PD++
Sbjct: 104 YGVWPDYL 111
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 YGLQPDHV 8
YG+ PD++
Sbjct: 104 YGVWPDYL 111
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 YGLQPDHV 8
YG+ PD++
Sbjct: 104 YGVWPDYL 111
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 YGLQPDHV 8
YG+ PD++
Sbjct: 104 YGVWPDYL 111
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 YGLQPDHV 8
YG+ PD++
Sbjct: 104 YGVWPDYL 111
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 YGLQPDHV 8
YG+ PD++
Sbjct: 104 YGVWPDYL 111
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YGLQPDHVFQ 10
YG QP ++
Sbjct: 485 YGFQPHQSYE 494
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YGLQPDHVFQ 10
YG QP ++
Sbjct: 485 YGFQPHQSYE 494
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YGLQPDHVFQ 10
YG QP ++
Sbjct: 485 YGFQPHQSYE 494
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 3 LQPDHVF 9
L+P HVF
Sbjct: 319 LRPMHVF 325
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 3 LQPDHVF 9
L+P HVF
Sbjct: 319 LRPMHVF 325
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 3 LQPDHVF 9
L+P HVF
Sbjct: 319 LRPMHVF 325
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 3 LQPDHVF 9
L+P HVF
Sbjct: 319 LRPMHVF 325
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 3 LQPDHVF 9
L+P HVF
Sbjct: 319 LRPMHVF 325
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 3 LQPDHVF 9
L+P HVF
Sbjct: 319 LRPMHVF 325
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 QPDHVFQ 10
QP+H F+
Sbjct: 643 QPEHSFE 649
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 QPDHVFQ 10
QP+H F+
Sbjct: 643 QPEHSFE 649
57|SequenceR|290|281|VCPLSYGLQP
>sp|RIR2_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 8 type P
Query: 2 CPLSY 6
CPLSY
Sbjct: 276 CPLSY 280
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 2 CPLSYGLQP 10
C L Y L+P
Sbjct: 343 CQLMYALEP 351
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CPLSYGLQP 10
C L Y L+P
Sbjct: 343 CQLMYALEP 351
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CPLSYGLQP 10
C L Y L+P
Sbjct: 343 CQLMYALEP 351
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 2 CPLSYGLQP 10
C L Y L+P
Sbjct: 343 CQLMYALEP 351
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 ICPINYSL 67
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CPLSY 6
CPL+Y
Sbjct: 273 CPLTY 277
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPLSY 6
CPL+Y
Sbjct: 273 CPLTY 277
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPLSY 6
CPL+Y
Sbjct: 273 CPLTY 277
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 SYGLQP 10
SYG QP
Sbjct: 494 SYGFQP 499
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSYGL 8
CPL Y +
Sbjct: 1925 CPLDYSI 1931
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 5 SYGLQP 10
SYGL+P
Sbjct: 1576 SYGLKP 1581
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 5 SYGLQP 10
SYGL+P
Sbjct: 1576 SYGLKP 1581
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 CPLSYGLQP 10
CP GL+P
Sbjct: 1625 CPPIQGLRP 1633
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CPLSYGLQP 10
CP GL+P
Sbjct: 1625 CPPIRGLRP 1633
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CPLSYGLQP 10
CP GL+P
Sbjct: 1625 CPPIRGLRP 1633
>sp|M1_I68A0|MATRIX protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 2 CPLSYGLQ 9
CP GLQ
Sbjct: 68 CPSERGLQ 75
>sp|M1_I61A1|MATRIX protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 CPLSYGLQ 9
CP GLQ
Sbjct: 68 CPSERGLQ 75
>sp|M1_I54A1|MATRIX protein 1|Influenza A virus (strain A/Swine/May/1954
Query: 2 CPLSYGLQ 9
CP GLQ
Sbjct: 68 CPSERGLQ 75
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 MCPINYSL 67
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 2 CPLSYG 7
CP S+G
Sbjct: 369 CPFSFG 374
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 MCPINYSL 67
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1926 CPLDY 1930
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1926 CPLDY 1930
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1759 CPLDY 1763
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1923 CPLDY 1927
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1925 CPLDY 1929
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 1 VCPLSYGL 8
+CP++Y L
Sbjct: 60 MCPINYSL 67
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1925 CPLDY 1929
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1925 CPLDY 1929
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1925 CPLDY 1929
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 CPLSY 6
CPL Y
Sbjct: 1925 CPLDY 1929
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PLSYG 7
PLSYG
Sbjct: 234 PLSYG 238
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PLSYG 7
PLSYG
Sbjct: 234 PLSYG 238
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PLSYG 7
PLSYG
Sbjct: 234 PLSYG 238
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 CPLSY 6
CP SY
Sbjct: 697 CPFSY 701
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 2 CPLSYGLQP 10
C LS+G P
Sbjct: 89 CMLSFGAGP 97
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 2 CPLSYGLQP 10
C LS+G P
Sbjct: 89 CMLSFGAGP 97
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 2 CPLSYGLQP 10
C LS+G P
Sbjct: 89 CMLSFGAGP 97
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 2 CPLSYGLQP 10
C LS+G P
Sbjct: 89 CMLSFGAGP 97
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 2 CPLSYGLQP 10
C LS+G P
Sbjct: 89 CMLSFGAGP 97
58|SequenceR|295|286|NPCGAVCPLS
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 1 NPCGAVC 7
+PC A+C
Sbjct: 246 SPCNALC 252
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 NPCGAVC--PLS 10
+PC +VC P+S
Sbjct: 659 SPCASVCGQPIS 670
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CGAVCPL 9
CG +CP+
Sbjct: 212 CGTICPI 218
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CGAVCPL 9
CG +CP+
Sbjct: 212 CGTICPI 218
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 5 AVCPLS 10
AVCPL+
Sbjct: 313 AVCPLA 318
>sp|K5_VACCC|PROTEIN K5|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PCGAVCPLS 10
P G +CP S
Sbjct: 51 PVGKLCPES 59
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 1 NPCGAVC 7
+PC A+C
Sbjct: 246 SPCNALC 252
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 1 NPCGAVC 7
N C A+C
Sbjct: 278 NDCHAIC 284
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 PCGAVCP 8
P G +CP
Sbjct: 587 PLGVLCP 593
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 PCGAVCP 8
P G +CP
Sbjct: 587 PLGVLCP 593
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 PCGAVCPLS 10
P GA P+S
Sbjct: 606 PTGAAIPVS 614
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 PCGAVCPLS 10
P GA P+S
Sbjct: 606 PTGAAIPVS 614
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 PCGAVCPLS 10
P GA P+S
Sbjct: 605 PTGAAIPVS 613
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 NPCGAVCPL 9
N CG PL
Sbjct: 6007 NACGTNVPL 6015
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 NPCGAVCPLS 10
+PC C LS
Sbjct: 372 HPCNVFCVLS 381
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 1 NPCGAVCPLS 10
+PC C LS
Sbjct: 372 HPCNVFCVLS 381
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 NPCGAVCPLS 10
+PC C LS
Sbjct: 374 HPCNVFCVLS 383
59|SequenceR|300|291|EKILSNPCGA
>sp|U24A_HHV6Z|UNCHARACTERIZED protein U24A|Human herpesvirus 6B (strain Z29)
Query: 2 KILSNPC 8
+ILS+PC
Sbjct: 48 EILSSPC 54
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 LSNPCGA 10
L+NPC A
Sbjct: 648 LNNPCQA 654
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 4 LSNPCGA 10
LSNP GA
Sbjct: 783 LSNPFGA 789
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 LSNPCGA 10
LSNP GA
Sbjct: 783 LSNPFGA 789
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 3 ILSNPCG 9
+LS PCG
Sbjct: 243 LLSGPCG 249
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 EKILSNPC 8
E +LS PC
Sbjct: 255 ETVLSLPC 262
>sp|VE2_HPV32|REGULATORY protein E2|Human papillomavirus type 32
Query: 6 NPCG 9
NPCG
Sbjct: 301 NPCG 304
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 4 LSNPCGA 10
+SNP GA
Sbjct: 768 MSNPFGA 774
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 4 LSNPCGA 10
+SNP GA
Sbjct: 768 MSNPFGA 774
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 ILSNPCG 9
++ NPCG
Sbjct: 192 LMYNPCG 198
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 5 SNPCGA 10
S+PCG+
Sbjct: 38 SDPCGS 43
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 5 SNPCGA 10
S+PCG+
Sbjct: 36 SDPCGS 41
60|SequenceR|305|296|RFHHLEKILS
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 RFHHLEKIL 9
R+ H+EK+L
Sbjct: 929 RYSHIEKLL 937
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 391 KFHQIEKEFS 400
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 391 KFHQIEKEFS 400
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 391 KFHQIEKEFS 400
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 391 KFHQIEKEFS 400
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 408 KFHQIEKEFS 417
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 391 KFHQIEKEFS 400
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 406 KFHQIEKEFS 415
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 RFHHLEKILS 10
+FH +EK S
Sbjct: 407 KFHQIEKEFS 416
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 FHHLEK 7
F+HLEK
Sbjct: 414 FNHLEK 419
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 FHHLEK 7
F+HLEK
Sbjct: 414 FNHLEK 419
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 FHHLEKILS 10
+ HLEKI S
Sbjct: 231 YSHLEKIGS 239
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 HLEKILS 10
H++K+LS
Sbjct: 1294 HVQKVLS 1300
61|SequenceR|310|301|EEGLIRFHHL
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 EGLIRFHHL 10
+GLIR +HL
Sbjct: 1487 QGLIRLYHL 1495
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 EEGLIRFHHL 10
E+ L+RF HL
Sbjct: 1408 EDDLLRFPHL 1417
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 EEGLIRFHHL 10
E+ L+RF HL
Sbjct: 1408 EDDLLRFPHL 1417
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 EGLIRF 7
EGLIRF
Sbjct: 1220 EGLIRF 1225
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 97 QGLLRYH 103
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 EGLIRFH 8
+GL+R+H
Sbjct: 118 QGLLRYH 124
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 LIRFHHL 10
LIR +HL
Sbjct: 1504 LIRLYHL 1510
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 LIRFHHL 10
LIR +HL
Sbjct: 1489 LIRLYHL 1495
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 LIRFHHL 10
LIR +HL
Sbjct: 1489 LIRLYHL 1495
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 LIRFHHL 10
LIR +HL
Sbjct: 1504 LIRLYHL 1510
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 LIRFHHL 10
LIR +HL
Sbjct: 1489 LIRLYHL 1495
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 LIRFHHL 10
LIR +HL
Sbjct: 1489 LIRLYHL 1495
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 EEGLIRFH 8
E G IR H
Sbjct: 2574 ERGYIRLH 2581
>sp|ORF58_HHV8P|PROTEIN ORF58|Human herpesvirus 8 type P
Query: 3 GLIRFHHL 10
GL+ F HL
Sbjct: 173 GLLAFRHL 180
>sp|BLLF2_EBVG|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GLIRFHHL 10
GL+R H L
Sbjct: 119 GLLRAHRL 126
>sp|BLLF2_EBVB9|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GLIRFHHL 10
GL+R H L
Sbjct: 119 GLLRAHRL 126
>sp|BLLF2_EBVA8|UNCHARACTERIZED protein BLLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GLIRFHHL 10
GL+R H L
Sbjct: 119 GLLRAHRL 126
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 EGLIRFHH 9
EG +HH
Sbjct: 186 EGFYNWHH 193
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 EGLIRFHH 9
EG +HH
Sbjct: 186 EGFYNWHH 193
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 EGLIRFHH 9
EG +HH
Sbjct: 186 EGFYNWHH 193
62|SequenceR|315|306|YRNYQEEGLI
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 RNYQEEGLI 10
R Y EGLI
Sbjct: 95 RRYSGEGLI 103
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 3 NYQEE 7
NYQEE
Sbjct: 630 NYQEE 634
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 3 NYQEE 7
NYQEE
Sbjct: 630 NYQEE 634
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 NYQEE 7
NYQEE
Sbjct: 630 NYQEE 634
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 1 YRNYQEEGLI 10
YR+ QE+ +I
Sbjct: 331 YRDRQEKNII 340
>sp|UL49_HCMVM|PROTEIN UL49|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 YRNYQEEGLI 10
YR+ QE+ +I
Sbjct: 402 YRDRQEKSVI 411
>sp|UL49_HCMVA|UNCHARACTERIZED protein UL49|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YRNYQEEGLI 10
YR+ QE+ +I
Sbjct: 402 YRDRQEKSVI 411
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 YRNYQEEGL 9
YR+ Q +GL
Sbjct: 1038 YRHMQRQGL 1046
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 YRNYQEE 7
+R+Y+EE
Sbjct: 1854 FRSYKEE 1860
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 1 YRNYQEEGL 9
YR YQE GL
Sbjct: 155 YR-YQERGL 162
>sp|VP7_ROTGA|OUTER capsid glycoprotein VP7|Rotavirus B (isolate
Query: 1 YRNYQEEGLI 10
YR+Y G+I
Sbjct: 202 YRDYDVSGVI 211
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 4 YQEEGLI 10
YQ+EG++
Sbjct: 354 YQKEGVV 360
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 1 YRNYQEE 7
Y NY EE
Sbjct: 503 YPNYSEE 509
63|SequenceR|320|311|AGYQQYRNYQ
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 3 YQQYRNY 9
Y+QYRNY
Sbjct: 600 YRQYRNY 606
Query: 3 YQQYRNYQ 10
YQ YR Y+
Sbjct: 597 YQSYRQYR 604
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 3 YQQYRNY 9
Y+QYRNY
Sbjct: 601 YRQYRNY 607
Query: 3 YQQYRNYQ 10
YQ YR Y+
Sbjct: 598 YQSYRQYR 605
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 3 YQQYRNY 9
Y+QYRNY
Sbjct: 601 YRQYRNY 607
Query: 3 YQQYRNYQ 10
YQ YR Y+
Sbjct: 598 YQSYRQYR 605
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 3 YQQYRNY 9
Y+QYRNY
Sbjct: 600 YRQYRNY 606
Query: 3 YQQYRNYQ 10
YQ YR Y+
Sbjct: 597 YQSYRQYR 604
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 5 QYRNY 9
QYRNY
Sbjct: 93 QYRNY 97
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 YQQYRNYQ 10
Y+Q+ N+Q
Sbjct: 606 YEQWNNHQ 613
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 5 QYRNY 9
QYRNY
Sbjct: 93 QYRNY 97
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 5 QYRNY 9
QYRNY
Sbjct: 93 QYRNY 97
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 GYQQYRNY 9
G ++YR+Y
Sbjct: 3404 GEEEYRDY 3411
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 5 QYRNYQ 10
QYR YQ
Sbjct: 810 QYRGYQ 815
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 GYQQYR 7
GYQ YR
Sbjct: 490 GYQPYR 495
>sp|VE6_HPV40|PROTEIN E6|Human papillomavirus 40
Query: 5 QYRNYQ 10
QYRN++
Sbjct: 75 QYRNFR 80
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 GYQQYR 7
GYQ YR
Sbjct: 504 GYQPYR 509
>sp|PG155_VARV|ENVELOPE protein OPG155|Variola virus
Query: 2 GYQQYRNY 9
GY Y NY
Sbjct: 23 GYSIYENY 30
>sp|PG155_VAR67|ENVELOPE protein OPG155|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 GYQQYRNY 9
GY Y NY
Sbjct: 23 GYSIYENY 30
>sp|ORF2_TTVVG|UNCHARACTERIZED ORF2 protein|Torque teno virus (isolate Human/Ghana/GH1/1996)
Query: 4 QQYRNYQ 10
QQY N+Q
Sbjct: 39 QQYLNWQ 45
>sp|VE6_HPV07|PROTEIN E6|Human papillomavirus 7
Query: 5 QYRNYQ 10
QYRN++
Sbjct: 75 QYRNFR 80
>sp|PG155_CWPXG|ENVELOPE protein OPG155|Cowpox virus (strain GRI-90 /
Query: 2 GYQQYRNY 9
GY Y NY
Sbjct: 23 GYSIYENY 30
>sp|PG155_VACCC|ENVELOPE protein OPG155|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GYQQYRNY 9
GY Y NY
Sbjct: 23 GYSIYENY 30
>sp|PG155_VACCA|ENVELOPE protein OPG155|Vaccinia virus (strain Ankara) (VACV)
Query: 2 GYQQYRNY 9
GY Y NY
Sbjct: 23 GYSIYENY 30
>sp|PG155_CWPXB|ENVELOPE protein OPG155|Cowpox virus (strain Brighton Red)
Query: 2 GYQQYRNY 9
GY Y NY
Sbjct: 23 GYSIYENY 30
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 5 QYRNY 9
QY+NY
Sbjct: 93 QYKNY 97
64|SequenceR|325|316|LVCEEAGYQQ
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 VCEEAGYQ 9
VCE+AG Q
Sbjct: 174 VCEDAGSQ 181
>sp|E1A_ADE05|EARLY E1A protein|Human adenovirus C serotype 5
Query: 1 LVCEEAGY 8
L C EAG+
Sbjct: 122 LTCHEAGF 129
>sp|E1A_ADE02|EARLY E1A protein|Human adenovirus C serotype 2
Query: 1 LVCEEAGY 8
L C EAG+
Sbjct: 122 LTCHEAGF 129
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 VCEEAGYQ 9
VC++AG Q
Sbjct: 174 VCKDAGSQ 181
>sp|NSP5_ROTJ1|NON-STRUCTURAL protein 5|Rotavirus X (strain
Query: 2 VCEEAGYQQ 10
VCEE+ Y +
Sbjct: 82 VCEESWYDK 90
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CEEAGYQQ 10
CE A Y+Q
Sbjct: 6800 CELANYKQ 6807
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LVCEEAGY 8
++CE+A Y
Sbjct: 321 IICEDAMY 328
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LVCEEAGY 8
++CE+A Y
Sbjct: 347 IICEDAMY 354
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 LVCEEAGY 8
++CE+A Y
Sbjct: 317 IICEDAMY 324
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CEEAGY 8
CE+A Y
Sbjct: 593 CEQAAY 598
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CEEAGY 8
CE+A Y
Sbjct: 593 CEQAAY 598
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 LVCEEAGYQQ 10
LVC Y+Q
Sbjct: 2096 LVCTYLAYEQ 2105
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 LVCEEAGYQ 9
+ C E G+Q
Sbjct: 1108 ICCGEVGFQ 1116
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 941 LCQEAG 946
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 940 LCQEAG 945
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 VCEEAG 7
+C+EAG
Sbjct: 941 LCQEAG 946
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LVCEEAGYQQ 10
L CE YQQ
Sbjct: 53 LSCEGQRYQQ 62
65|SequenceR|330|321|VGGMQLVCEE
>sp|EV45_HHV1K|ENVELOPE protein UL45|Human herpesvirus 1 (strain KOS)
Query: 1 VGGMQLVCEE 10
VGG+ CEE
Sbjct: 134 VGGIDQFCEE 143
>sp|EV45_HHV1M|ENVELOPE protein UL45|Human herpesvirus 1 (strain MP)
Query: 1 VGGMQLVCEE 10
VGG+ CEE
Sbjct: 134 VGGIDQFCEE 143
>sp|EV45_HHV11|ENVELOPE protein UL45|Human herpesvirus 1 (strain 17)
Query: 1 VGGMQLVCEE 10
VGG+ CEE
Sbjct: 134 VGGIDQFCEE 143
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 1 VGGMQLVCEE 10
VGG +VC E
Sbjct: 189 VGGQVIVCPE 198
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 VGGMQLVCEE 10
+GGM CE+
Sbjct: 5362 LGGMSYYCED 5371
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 VGGMQLVCE 9
+GGM CE
Sbjct: 5400 LGGMSYYCE 5408
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 VGGMQLVCE 9
+GGM CE
Sbjct: 5420 LGGMSYYCE 5428
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 VGGMQLVCE 9
+GGM CE
Sbjct: 5450 LGGMSYYCE 5458
>sp|VE7_HPV09|PROTEIN E7|Human papillomavirus 9
Query: 1 VGGMQLVCEE 10
+G +QLVC E
Sbjct: 76 LGDIQLVCPE 85
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 4 MQLVCE 9
+QL+CE
Sbjct: 261 LQLICE 266
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 VGGMQLVC 8
VGG +VC
Sbjct: 188 VGGQVIVC 195
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 1 VGGMQLVC 8
VGG +VC
Sbjct: 188 VGGQVIVC 195
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 GGMQLVCE 9
GG +++CE
Sbjct: 12 GGKRVLCE 19
>sp|VE7_HPV47|PROTEIN E7|Human papillomavirus 47
Query: 1 VGGMQLVCEE 10
G +QL+C E
Sbjct: 84 TGDLQLLCPE 93
>sp|VE7_HPV36|PROTEIN E7|Human papillomavirus 36
Query: 2 GGMQLVCEE 10
G +QL+C E
Sbjct: 84 GDLQLLCPE 92
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 GMQLVCE 9
G Q +CE
Sbjct: 1144 GQQAICE 1150
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 3 GMQLVCE 9
G Q +CE
Sbjct: 1144 GQQAICE 1150
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 GMQLVCE 9
G Q +CE
Sbjct: 1144 GQQAICE 1150
66|SequenceR|335|326|PRPCLVGGMQ
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 PRPCLVG 7
P+PCL G
Sbjct: 1514 PKPCLKG 1520
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 PRPCLVGGM 9
P+ CL+ GM
Sbjct: 57 PKFCLIDGM 65
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PRPCLVGGM 9
P+ CL+ GM
Sbjct: 57 PKFCLIDGM 65
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 PRPCLVGGM 9
P+ CL+ GM
Sbjct: 57 PKFCLIDGM 65
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PRPCLVGGM 9
P+ CL+ GM
Sbjct: 57 PKFCLIDGM 65
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 PRPCLVGGM 9
P+ CL+ GM
Sbjct: 57 PKFCLIDGM 65
>sp|Y104_ADE07|UNCHARACTERIZED 10.4 kDa early protein|Human adenovirus B serotype 7
Query: 2 RPCLVGGM 9
RP LVGG+
Sbjct: 33 RPLLVGGI 40
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 PCLVG 7
PC+VG
Sbjct: 6578 PCMVG 6582
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 PCLVGGM 9
PC++GG+
Sbjct: 568 PCVIGGV 574
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 PCLVGGM 9
PC++GG+
Sbjct: 568 PCVIGGV 574
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 1 PRPCLVGGM 9
P C++GG+
Sbjct: 259 PLRCMLGGV 267
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 PRPCLVGGMQ 10
P C++GG +
Sbjct: 478 PAKCILGGTE 487
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 CLVGGM 9
C++GGM
Sbjct: 2013 CVLGGM 2018
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 CLVGGM 9
C++GGM
Sbjct: 2013 CVLGGM 2018
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 PRPCLVGGMQ 10
P C++GG +
Sbjct: 478 PAKCILGGTE 487
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 PCLVGG 8
PC++GG
Sbjct: 568 PCVIGG 573
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 PCLVGG 8
PC++GG
Sbjct: 568 PCVIGG 573
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 CLVGGM 9
C++GGM
Sbjct: 2013 CVLGGM 2018
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 PRPCLVGGMQ 10
P C++GG +
Sbjct: 478 PAKCILGGTE 487
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 CLVGGM 9
C++GGM
Sbjct: 2013 CVLGGM 2018
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 PRPCLVGGMQ 10
P C++GG +
Sbjct: 478 PAKCILGGTE 487
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 CLVGGM 9
C++GGM
Sbjct: 2013 CVLGGM 2018
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 2 RPCLV 6
RPCLV
Sbjct: 126 RPCLV 130
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 2 RPCLV 6
RPCLV
Sbjct: 126 RPCLV 130
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 1 PRPCLVG 7
PRP +VG
Sbjct: 158 PRPDVVG 164
67|SequenceR|340|331|GAGCGPRPCL
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 GAGCGPRPCL 10
GAG GP PCL
Sbjct: 31 GAGRGPPPCL 40
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 GAGCGPRPCL 10
GAG GP PCL
Sbjct: 31 GAGRGPPPCL 40
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 1 GAGCGPRPCL 10
GAG GP PCL
Sbjct: 31 GAGRGPPPCL 40
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 GAGCGPRPCL 10
GA GP PCL
Sbjct: 31 GASRGPPPCL 40
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 GAGCGPRP 8
GAG PRP
Sbjct: 580 GAGGIPRP 587
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 CGPRP 8
CGP P
Sbjct: 447 CGPNP 451
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GCGPRPCL 10
G G +PC+
Sbjct: 3846 GVGGKPCI 3853
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GCGPRPCL 10
G G +PC+
Sbjct: 3846 GVGGKPCI 3853
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 4 CGPRPC 9
CG PC
Sbjct: 1098 CGGNPC 1103
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CGPRPC 9
CG PC
Sbjct: 211 CGGNPC 216
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 GCGPRPCL 10
G G +PC+
Sbjct: 3823 GIGGKPCI 3830
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 GCGPRPCL 10
G G +PC+
Sbjct: 3823 GIGGKPCI 3830
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 GCGP 6
GCGP
Sbjct: 141 GCGP 144
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GCGP 6
GCGP
Sbjct: 167 GCGP 170
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 3 GCGP 6
GCGP
Sbjct: 137 GCGP 140
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 CGPRPCL 10
CG PC+
Sbjct: 365 CGESPCV 371
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 CGPRPCL 10
CG PC+
Sbjct: 365 CGESPCV 371
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 CGPRPCL 10
CG PC+
Sbjct: 365 CGESPCV 371
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 GCGPRPC 9
GCG RP
Sbjct: 479 GCGSRPA 485
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 GAGCGPRP 8
GAG P P
Sbjct: 19 GAGAAPIP 26
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 GAGCGPRP 8
GAG P P
Sbjct: 19 GAGAAPIP 26
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPTP 235
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 GAGCGPRP 8
GAG GP P
Sbjct: 228 GAGAGPMP 235
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 3 GCGP 6
GCGP
Sbjct: 92 GCGP 95
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 AGCGPRPC 9
A PRPC
Sbjct: 126 ADYAPRPC 133
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 GCGP 6
GCGP
Sbjct: 1296 GCGP 1299
>sp|VP22_VZVO|TEGUMENT protein VP22|Varicella-zoster virus (strain Oka vaccine)
Query: 4 CGPRP 8
CGP P
Sbjct: 170 CGPTP 174
>sp|VP22_VZVD|TEGUMENT protein VP22|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CGPRP 8
CGP P
Sbjct: 170 CGPTP 174
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 1 GAGCGP 6
G GC P
Sbjct: 209 GIGCSP 214
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 1 GAGCGP 6
G GC P
Sbjct: 209 GIGCSP 214
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GAGCGPRPC 9
GA CG R C
Sbjct: 2701 GAQCGYRRC 2709
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 AGCGPRP 8
+G GP+P
Sbjct: 1012 SGTGPQP 1018
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 4 CGPRPC 9
C PR C
Sbjct: 124 CDPRKC 129
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AGCGPRP 8
+G GP+P
Sbjct: 1013 SGTGPQP 1019
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 1 GAGCGPRPC 9
GAG GP C
Sbjct: 230 GAGDGPPLC 238
68|SequenceR|345|336|PEPLLGAGCG
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PEPLLGAGC 9
P +LGAGC
Sbjct: 5226 PSRILGAGC 5234
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PEPLLGAGC 9
P +LGAGC
Sbjct: 5203 PSRILGAGC 5211
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PEPLLGAGC 9
P +LGAGC
Sbjct: 5199 PSRILGAGC 5207
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PEPLLGAGC 9
P +LGAGC
Sbjct: 5237 PSRILGAGC 5245
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PEPLLGAGC 9
P +LGAGC
Sbjct: 5257 PSRILGAGC 5265
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PEPLLGAGC 9
P +LGAGC
Sbjct: 5287 PSRILGAGC 5295
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 PEPLLGAGC 9
P+P++ GC
Sbjct: 256 PDPIVDPGC 264
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 PEPLLGAGC 9
P+P++ GC
Sbjct: 256 PDPIVDPGC 264
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 PEPLLGAGC 9
P+P++ GC
Sbjct: 256 PDPIVDPGC 264
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 123 PLLGAG 128
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 PEPLLGAGC 9
PEP +G GC
Sbjct: 88 PEPDIGDGC 96
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 PEPLLGAGC 9
PEP +G GC
Sbjct: 88 PEPDIGDGC 96
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 PEPLLGAGC 9
PEP +G GC
Sbjct: 88 PEPDIGDGC 96
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 PEPLLGAGCG 10
P PLLG G
Sbjct: 1219 PPPLLGNSTG 1228
>sp|ORF49_HHV8P|PROTEIN ORF49|Human herpesvirus 8 type P
Query: 3 PLLGAGC 9
PL+ AGC
Sbjct: 104 PLVDAGC 110
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 1 PEPLLGAGC 9
P PL+G C
Sbjct: 6 PRPLVGRSC 14
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PEPLLGAG 8
PEP +G G
Sbjct: 25 PEPAVGVG 32
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 EPLLGAGCG 10
+PL+ +GC
Sbjct: 811 DPLITSGCA 819
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2331 PLLAMGC 2337
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2331 PLLAMGC 2337
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2331 PLLAMGC 2337
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2331 PLLAMGC 2337
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2331 PLLAMGC 2337
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2335 PLLAIGC 2341
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2332 PLLAIGC 2338
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2335 PLLAIGC 2341
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2335 PLLAIGC 2341
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2335 PLLAIGC 2341
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2335 PLLAIGC 2341
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2335 PLLAIGC 2341
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2336 PLLALGC 2342
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2337 PLLALGC 2343
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2337 PLLALGC 2343
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 3 PLLGAGCG 10
P LGAG G
Sbjct: 148 PGLGAGVG 155
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2334 PLLALGC 2340
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2334 PLLALGC 2340
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2334 PLLALGC 2340
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2334 PLLALGC 2340
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2334 PLLALGC 2340
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PLLGAG 8
PL GAG
Sbjct: 1978 PLFGAG 1983
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PLLGAG 8
PL GAG
Sbjct: 1978 PLFGAG 1983
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 PLLGAGCG 10
PLLG G G
Sbjct: 406 PLLGQGEG 413
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 PLLGAGC 9
PLL GC
Sbjct: 2349 PLLALGC 2355
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 4 LLGAGC 9
LLG GC
Sbjct: 140 LLGIGC 145
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 4 LLGAGC 9
LLG GC
Sbjct: 140 LLGIGC 145
>sp|PHOSP_PIV5|PHOSPHOPROTEIN virus 5 (strain W3)
Query: 1 PEPLLG 6
P PLLG
Sbjct: 99 PNPLLG 104
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 3 PLLGAG 8
PLLG G
Sbjct: 129 PLLGCG 134
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PLLGAG 8
PLLG G
Sbjct: 128 PLLGCG 133
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 882 PLLGAG 887
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 PLLGAG 8
PLLGAG
Sbjct: 934 PLLGAG 939
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 EPLLGAG 8
EP +GAG
Sbjct: 30 EPAVGAG 36
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 3 PLLGAGCG 10
P LGAG G
Sbjct: 268 PGLGAGTG 275
69|SequenceR|350|341|VKRQDPEPLL
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RQDPEPLL 10
R DP PLL
Sbjct: 98 RDDPSPLL 105
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 4 QDPEPLL 10
+DPEPLL
Sbjct: 320 EDPEPLL 326
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 4 QDPEPLL 10
+DPEPLL
Sbjct: 320 EDPEPLL 326
>sp|V_MUMPS|NON-STRUCTURAL protein V|Mumps virus (strain SBL) (MuV)
Query: 4 QDPEPLL 10
QDPEPL
Sbjct: 92 QDPEPLF 98
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VKRQDPEPLL 10
++RQ PEP +
Sbjct: 20 IRRQTPEPAV 29
>sp|PHOSP_MUMPS|PHOSPHOPROTEIN virus (strain SBL) (MuV)
Query: 4 QDPEPLL 10
QDPEPL
Sbjct: 92 QDPEPLF 98
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 DPEPLL 10
DP PLL
Sbjct: 100 DPSPLL 105
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QDPEPLL 10
++PEPLL
Sbjct: 320 EEPEPLL 326
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 1 VKRQDPEP 8
++R+DP P
Sbjct: 295 IQRKDPGP 302
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 DPEPL 9
DPEPL
Sbjct: 1410 DPEPL 1414
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 DPEPL 9
DPEPL
Sbjct: 1410 DPEPL 1414
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 DPEPL 9
DPEPL
Sbjct: 1410 DPEPL 1414
>sp|3BHST_VAR67|TRUNCATED 3-beta hydroxy-5-ene steroid dehydrogenase|Variola virus (isolate
Query: 4 QDPEPLL 10
+DP+PL+
Sbjct: 37 EDPQPLV 43
>sp|UL17_HCMVM|PROTEIN UL17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RQDPEPLL 10
R+D EPL+
Sbjct: 86 REDSEPLM 93
>sp|UL17_HCMVA|UNCHARACTERIZED protein UL17|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RQDPEPLL 10
R+D EPL+
Sbjct: 86 REDSEPLM 93
>sp|UL17_HCMVT|PROTEIN UL17|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 RQDPEPLL 10
R+D EPL+
Sbjct: 86 REDSEPLM 93
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 1 VKRQDPEP 8
V+R DP P
Sbjct: 46 VERHDPGP 53
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 5 DPEPL 9
DPEPL
Sbjct: 208 DPEPL 212
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 1 VKRQDPEP 8
V+R DP P
Sbjct: 46 VERHDPGP 53
>sp|VE7_HPV11|PROTEIN E7|Human papillomavirus 11
Query: 1 VKRQDPEPL 9
V +QD +PL
Sbjct: 40 VDKQDAQPL 48
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 VKRQDPEPLL 10
VKR+ +PL+
Sbjct: 803 VKREIKDPLI 812
70|SequenceR|355|346|GGECTVKRQD
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 ECTVKRQD 10
ECTV+R+D
Sbjct: 231 ECTVRRRD 238
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
GG+C RQD
Sbjct: 1424 GGDCVAGRQD 1433
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 ECTVKRQD 10
EC+V+R+D
Sbjct: 104 ECSVRRRD 111
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 GGECTVKRQD 10
G CTV R+D
Sbjct: 603 GVSCTVTRED 612
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 GGECTVKRQD 10
G CTV R+D
Sbjct: 603 GVSCTVTRED 612
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 GGECTVKRQD 10
G CTV R+D
Sbjct: 603 GVSCTVTRED 612
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 GGECTVKRQD 10
G CTV R+D
Sbjct: 603 GVSCTVTRED 612
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GGECTVKRQD 10
G CTV R+D
Sbjct: 603 GVSCTVTRED 612
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 GGECTVKRQD 10
G CTV R+D
Sbjct: 603 GVSCTVTRED 612
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1420 GADCMASRQD 1429
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 ECTVKRQD 10
EC+ +R+D
Sbjct: 240 ECSARRRD 247
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 3 ECTVKRQD 10
EC+ +R+D
Sbjct: 240 ECSARRRD 247
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1428 GADCVAGRQD 1437
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 ECTVKRQD 10
EC VKR D
Sbjct: 6209 ECFVKRVD 6216
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 ECTVKRQD 10
EC VKR D
Sbjct: 6186 ECFVKRVD 6193
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1424 GDDCVASRQD 1433
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1425 GDDCVASRQD 1434
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1425 GDDCVASRQD 1434
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1428 GDDCVASRQD 1437
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1424 GDDCVASRQD 1433
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1436 GDDCVASRQD 1445
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1426 GDDCVASRQD 1435
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1423 GDDCVASRQD 1432
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1421 GDDCVASRQD 1430
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1436 GDDCVASRQD 1445
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1424 GDDCVASRQD 1433
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1425 GDDCVAGRQD 1434
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1422 GDDCVAGRQD 1431
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1419 GDDCVAGRQD 1428
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1421 GDDCVAGRQD 1430
>sp|PP71_HCMVM|PROTEIN pp71|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GECTVKRQD 10
G C V QD
Sbjct: 92 GRCVVGEQD 100
>sp|PP71_HCMVA|PROTEIN pp71|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GECTVKRQD 10
G C V QD
Sbjct: 92 GRCVVGEQD 100
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1421 GDDCVAGRQD 1430
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 1 GGECTVKR 8
GG C V+R
Sbjct: 409 GGVCEVRR 416
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 1 GGECTVKR 8
GG C V+R
Sbjct: 409 GGVCEVRR 416
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 1 GGECTVKR 8
GG C V+R
Sbjct: 409 GGVCEVRR 416
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1423 GDDCVAGRQD 1432
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1424 GDDCVASRQD 1433
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 1 GGECT 5
GGECT
Sbjct: 120 GGECT 124
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1424 GDDCVASRQD 1433
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1430 GDDCVASRQD 1439
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1436 GDDCVASRQD 1445
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1424 GDDCVASRQD 1433
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 137 GDDCVASRQD 146
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 GGECT 5
GGECT
Sbjct: 120 GGECT 124
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GGECTVKRQD 10
GG C+V D
Sbjct: 144 GGNCSVNTLD 153
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 GGECT 5
GGECT
Sbjct: 120 GGECT 124
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 1 GGECT 5
GGECT
Sbjct: 120 GGECT 124
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 1 GGECT 5
GGECT
Sbjct: 120 GGECT 124
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 GGECT 5
GGECT
Sbjct: 120 GGECT 124
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 ECTVKRQD 10
+C VKR++
Sbjct: 676 KCCVKREE 683
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GGECTVKRQD 10
G +C RQD
Sbjct: 1419 GDDCVAGRQD 1428
71|SequenceR|360|351|CGLGNGGECT
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 CGLGNGGEC 9
CG N GEC
Sbjct: 200 CGTQNAGEC 208
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 NGGECT 10
+GGECT
Sbjct: 119 HGGECT 124
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 5 NGGECT 10
+GGECT
Sbjct: 119 HGGECT 124
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 NGGECT 10
+GGECT
Sbjct: 119 HGGECT 124
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 5 NGGECT 10
+GGECT
Sbjct: 119 HGGECT 124
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 GLGNGGECT 10
G+GNG E +
Sbjct: 326 GMGNGSEVS 334
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 2 GLGNGGECT 10
G+GNG E +
Sbjct: 325 GMGNGSEVS 333
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 CGLGNGGEC 9
CG G+C
Sbjct: 980 CGFAEPGDC 988
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 5 NGGECT 10
NG ECT
Sbjct: 700 NGDECT 705
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CGLGNGG 7
CG G+GG
Sbjct: 1669 CGDGSGG 1675
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 2 GLGNGGE 8
GLG GGE
Sbjct: 626 GLGIGGE 632
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 5 NGGECT 10
+GGECT
Sbjct: 119 HGGECT 124
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 5 NGGECT 10
+GGECT
Sbjct: 119 HGGECT 124
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 4 GNGGE 8
GNGGE
Sbjct: 419 GNGGE 423
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 4 GNGGE 8
GNGGE
Sbjct: 420 GNGGE 424
>sp|CEP2_HHV8P|CYTOPLASMIC envelopment protein 2|Human herpesvirus 8 type P
Query: 1 CGLGNG 6
CG GNG
Sbjct: 243 CGTGNG 248
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 CGLGNG 6
CG GNG
Sbjct: 3 CGSGNG 8
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CGLGNGGEC 9
C LG+G C
Sbjct: 4029 CWLGHGCAC 4037
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 CGLGNGGECT 10
CGL + CT
Sbjct: 3 CGLNDVNVCT 12
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CGLGNGGEC 9
C LG+G C
Sbjct: 4029 CWLGHGCAC 4037
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2609 GCGRGGWC 2616
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CGLGNGGECT 10
C +G GG T
Sbjct: 569 CNIGGGGNNT 578
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2606 GCGRGGWC 2613
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2609 GCGRGGWC 2616
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4351 CGFWRDGSCS 4360
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4389 CGFWRDGSCS 4398
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4409 CGFWRDGSCS 4418
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4351 CGFWRDGSCS 4360
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2587 GCGRGGWC 2594
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2588 GCGRGGWC 2595
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2588 GCGRGGWC 2595
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 CGLGNGGECT 10
C +G GG T
Sbjct: 569 CNIGGGGNNT 578
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4439 CGFWRDGSCS 4448
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4389 CGFWRDGSCS 4398
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2587 GCGRGGWC 2594
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2587 GCGRGGWC 2594
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2587 GCGRGGWC 2594
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2587 GCGRGGWC 2594
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2587 GCGRGGWC 2594
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2588 GCGRGGWC 2595
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4409 CGFWRDGSCS 4418
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CGLGNGGECT 10
CG G C+
Sbjct: 4439 CGFWRDGSCS 4448
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 GLGNGGEC 9
G NG EC
Sbjct: 133 GNQNGAEC 140
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 3 LGNGGE 8
LGN GE
Sbjct: 1135 LGNAGE 1140
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 GLGNGGEC 9
G G GG C
Sbjct: 2588 GCGRGGWC 2595
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 3 LGNGGE 8
LGN GE
Sbjct: 1135 LGNAGE 1140
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 GNGGECT 10
GNG E T
Sbjct: 120 GNGNEVT 126
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 3 LGNGGE 8
LGN GE
Sbjct: 1135 LGNAGE 1140
72|SequenceR|365|356|CFAFGCGLGN
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CFAFGCGLG 9
C A G GLG
Sbjct: 9 CLAPGSGLG 17
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CFAFGCGLG 9
C A G GLG
Sbjct: 9 CLAPGSGLG 17
>sp|US10_HHV2H|VIRION protein US10|Human herpesvirus 2 (strain HG52)
Query: 3 AFGCG 7
AFGCG
Sbjct: 283 AFGCG 287
>sp|US10_HHV1F|VIRION protein US10|Human herpesvirus 1 (strain F)
Query: 3 AFGCG 7
AFGCG
Sbjct: 290 AFGCG 294
>sp|US10_HHV11|VIRION protein US10|Human herpesvirus 1 (strain 17)
Query: 3 AFGCG 7
AFGCG
Sbjct: 299 AFGCG 303
>sp|SPIKE_ADE04|FIBER protein|Human adenovirus E serotype 4
Query: 3 AFGCGLG 9
AFG GLG
Sbjct: 135 AFGSGLG 141
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 AFGCGLGN 10
+GC +GN
Sbjct: 1071 GYGCHMGN 1078
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 4 FGCGLG 9
F CGLG
Sbjct: 31 FKCGLG 36
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FGCGLG 9
F CGLG
Sbjct: 31 FKCGLG 36
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 CFAFGCGLGN 10
CF F C + N
Sbjct: 275 CFEFCCQVMN 284
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 CFAFGC 6
C+AF C
Sbjct: 205 CYAFCC 210
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CFAFGCG 7
CFA CG
Sbjct: 819 CFAGRCG 825
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 3 AFGCG 7
AFGCG
Sbjct: 195 AFGCG 199
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 FGCGLG 9
+ CGLG
Sbjct: 1289 YACGLG 1294
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 FGCGLG 9
+ CGLG
Sbjct: 1289 YACGLG 1294
>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 CF---AFGCGLGN 10
CF A CG GN
Sbjct: 21 CFRAHAGSCGCGN 33
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 CFAFGC 6
CF GC
Sbjct: 540 CFVSGC 545
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 CFAFGC 6
CF GC
Sbjct: 541 CFVSGC 546
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 AFGCGLGN 10
+F C LGN
Sbjct: 550 SFPCWLGN 557
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 FAFGC 6
F FGC
Sbjct: 363 FVFGC 367
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 CFAFGC 6
CF GC
Sbjct: 328 CFVRGC 333
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 5 GCGLGN 10
G GLGN
Sbjct: 690 GSGLGN 695
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 4 FGCGLGN 10
FGC + N
Sbjct: 89 FGCSIEN 95
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CFAFGCG 7
C AF CG
Sbjct: 816 CAAFVCG 822
73|SequenceR|370|361|EKCERCFAFG
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 1 EKCERCFA 8
E+C R FA
Sbjct: 6 EQCSRAFA 13
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 CERCFA 8
C++CFA
Sbjct: 1020 CQQCFA 1025
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 CERCFA 8
C++CFA
Sbjct: 1027 CQQCFA 1032
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 EKCERC 6
E+CE+C
Sbjct: 319 EECEKC 324
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 EKCERCFA 8
E C RC+
Sbjct: 650 EYCNRCYG 657
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 EKCERCFA 8
E C RC+
Sbjct: 650 EYCNRCYG 657
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 3 CERCF 7
C RCF
Sbjct: 163 CSRCF 167
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 EKCERC 6
E+CE+C
Sbjct: 312 EECEKC 317
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 EKCERC 6
E+CE+C
Sbjct: 312 EECEKC 317
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 EKCERC 6
E+CE+C
Sbjct: 312 EECEKC 317
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 EKCERCFAF 9
++CE C F
Sbjct: 90 QRCEHCARF 98
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 CERC 6
CERC
Sbjct: 174 CERC 177
>sp|NP1_HBOC1|NON-STRUCTURAL protein NP-1|Primate bocaparvovirus 1 (strain Human
Query: 3 CERC 6
CERC
Sbjct: 175 CERC 178
>sp|US33_HCMVA|UNCHARACTERIZED protein HHLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KCERCFAF 9
KC R F F
Sbjct: 15 KCRRRFGF 22
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 KCERCFAF 9
KC C AF
Sbjct: 2 KCLLCLAF 9
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 KCERC 6
KC RC
Sbjct: 1332 KCNRC 1336
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 KCERCFA 8
+C +C+A
Sbjct: 558 ECSKCYA 564
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 KCERCFA 8
+C +C+A
Sbjct: 556 ECSKCYA 562
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 EKCERCFAF 9
++CE C F
Sbjct: 217 QRCEYCARF 225
>sp|A53_VACCC|TRUNCATED secreted TNF-receptor-like protein A53|Vaccinia virus (strain
Query: 2 KCERC 6
KCERC
Sbjct: 71 KCERC 75
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 ERCFAFG 10
+RC A+G
Sbjct: 3384 QRCSAYG 3390
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 EKCERCFAF 9
+KC+ C F
Sbjct: 158 DKCQNCSKF 166
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 CERCFAFG 10
C++C A G
Sbjct: 1423 CDQCIANG 1430
>sp|UL92_HCMVM|UNCHARACTERIZED protein UL92|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CERCF 7
C RCF
Sbjct: 29 CTRCF 33
>sp|UL92_HCMVA|PROTEIN UL92|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CERCF 7
C RCF
Sbjct: 29 CTRCF 33
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 EKCERCFAF 9
E+C +C A
Sbjct: 17 EECPKCSAL 25
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 EKCERCFAF 9
E+C +C A
Sbjct: 17 EECPKCSAL 25
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 EKCERCFAF 9
E+C +C A
Sbjct: 17 EECPKCSAL 25
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 1 EKCERCFAF 9
E+C +C A
Sbjct: 17 EECPKCSAL 25
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2933 KCESC 2937
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2933 KCESC 2937
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2933 KCESC 2937
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2933 KCESC 2937
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 EKCERC 6
++CE C
Sbjct: 221 QRCEHC 226
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 CERCFAFG 10
C++C A G
Sbjct: 1422 CDQCIANG 1429
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 KCERC 6
KCE C
Sbjct: 2968 KCETC 2972
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 KCERC 6
KCE C
Sbjct: 2955 KCETC 2959
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2937 KCETC 2941
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2934 KCETC 2938
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2937 KCETC 2941
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2937 KCETC 2941
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 KCERC 6
KCE C
Sbjct: 2937 KCETC 2941
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2937 KCETC 2941
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 KCERC 6
KCE C
Sbjct: 2937 KCETC 2941
>sp|VU51_HHV6U|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6A (strain
Query: 3 CERCFA 8
C++CF+
Sbjct: 278 CKKCFS 283
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 CERCFAFG 10
C++C A G
Sbjct: 1425 CDQCVANG 1432
>sp|PG047_VACCC|IMMUNE evasion protein OPG047|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EKCERCFAFG 10
E C C+ G
Sbjct: 123 EYCVECYMMG 132
>sp|PG047_VACCA|IMMUNE evasion protein OPG047|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EKCERCFAFG 10
E C C+ G
Sbjct: 123 EYCVECYMMG 132
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 CERCFAFG 10
C++C A G
Sbjct: 1421 CDQCVANG 1428
>sp|NS1_INCHY|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 KCERCFAFG 10
KC RC G
Sbjct: 190 KCFRCIKSG 198
>sp|NS1_INCCA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/California/1978)
Query: 2 KCERCFAFG 10
KC RC G
Sbjct: 190 KCFRCIKSG 198
>sp|UL144_HCMVO|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Toledo) (HHV-5)
Query: 1 EKCERCFAFG 10
E+C++C + G
Sbjct: 160 ERCQQCCSIG 169
>sp|NS1_INCMI|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Mississippi/1980)
Query: 2 KCERCFAFG 10
KC RC G
Sbjct: 185 KCFRCIKSG 193
>sp|VU51_HHV6Z|G-PROTEIN coupled receptor homolog U51|Human herpesvirus 6B (strain Z29)
Query: 3 CERCFA 8
C++CF+
Sbjct: 278 CKKCFS 283
>sp|NS1_INCY6|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Yamagata/1964)
Query: 2 KCERCFAFG 10
KC RC G
Sbjct: 190 KCFRCIKSG 198
>sp|NS1_INCAA|NON-STRUCTURAL protein 1|Influenza C virus (strain C/Ann
Query: 2 KCERCFAFG 10
KC RC G
Sbjct: 190 KCFRCIKSG 198
74|SequenceR|375|366|GEHYAEKCER
>sp|UL136_HCMVM|PROTEIN UL136|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GEHYAEKCER 10
G HY EKC R
Sbjct: 107 GCHYPEKCRR 116
>sp|UL136_HCMVT|PROTEIN UL136|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GEHYAEKC 8
G HY EKC
Sbjct: 107 GCHYPEKC 114
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 GEHYAEKCER 10
G HY+ CER
Sbjct: 748 GAHYSCVCER 757
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 GEHYAEKCE 9
G+H E+CE
Sbjct: 541 GDHRTEECE 549
Query: 1 GEHYAEKCER 10
G+H+AE E+
Sbjct: 232 GKHFAEPLEK 241
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GEHYAEKCE 9
G+H E+CE
Sbjct: 541 GDHRTEECE 549
Query: 1 GEHYAEKCER 10
G+H+AE E+
Sbjct: 232 GKHFAEPLEK 241
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 GEHYAEKCE 9
G+H E+CE
Sbjct: 541 GDHRTEECE 549
Query: 1 GEHYAEKCER 10
G+H+AE E+
Sbjct: 232 GKHFAEPLEK 241
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 GEHYAEKCER 10
G H E+CE+
Sbjct: 536 GNHRTEECEQ 545
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 GEHYAE 6
G+HYAE
Sbjct: 286 GKHYAE 291
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 GEHYAE 6
G+HYAE
Sbjct: 286 GKHYAE 291
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GEHYAE 6
G+HYAE
Sbjct: 286 GKHYAE 291
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 GEHYAEKCER 10
GE Y KC R
Sbjct: 23 GEFYHFKCRR 32
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 3 HYAEKCER 10
H+A KC R
Sbjct: 36 HFARKCAR 43
Query: 1 GEHYAEKCER 10
G+H ++C R
Sbjct: 335 GDHDPQRCTR 344
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 EHYAEKC 8
+HY E+C
Sbjct: 467 KHYFERC 473
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 EHYAEKC 8
+HY E+C
Sbjct: 483 KHYFERC 489
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 3 HYAEKCER 10
++AEKC++
Sbjct: 259 YFAEKCKQ 266
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 3 HYAEKCER 10
++AEKC++
Sbjct: 259 YFAEKCKQ 266
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 GEHYAEKC 8
GEH E C
Sbjct: 801 GEHLTELC 808
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 GEHYAEKC 8
G HYA C
Sbjct: 1448 GPHYANNC 1455
>sp|GB_HCMVT|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 GEHYAEKCE 9
G H E+C+
Sbjct: 604 GNHRTEECQ 612
>sp|GB_HCMVM|ENVELOPE glycoprotein B|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GEHYAEKCE 9
G H E+C+
Sbjct: 604 GNHRTEECQ 612
>sp|GB_HCMVA|ENVELOPE glycoprotein B|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GEHYAEKCE 9
G H E+C+
Sbjct: 603 GNHRTEECQ 611
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 3 HYAEKC 8
HY KC
Sbjct: 262 HYLNKC 267
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 3 HYAEKCER 10
HY C+R
Sbjct: 1112 HYVFSCKR 1119
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 3 HYAEKC 8
H+A++C
Sbjct: 380 HHAQRC 385
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 EHYAEKCER 10
+H AE C +
Sbjct: 43 QHQAEPCNQ 51
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 EHYAEKCER 10
+H AE C +
Sbjct: 43 QHQAEPCNQ 51
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 EHYAEKCER 10
+H AE C +
Sbjct: 43 QHQAEPCNQ 51
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 EHYAEKCER 10
+H AE C +
Sbjct: 43 QHQAEPCNQ 51
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 EHYAEKCER 10
+H AE C +
Sbjct: 43 QHQAEPCNQ 51
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 4 YAEKCER 10
YA++C++
Sbjct: 467 YAQRCQQ 473
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GEHYAEKCER 10
GE + + C+R
Sbjct: 474 GERWRKHCQR 483
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 EHYAEKCER 10
EH CER
Sbjct: 801 EHRCPHCER 809
75|SequenceR|380|371|VASCEGEHYA
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 4 CEGEHYA 10
C+G HYA
Sbjct: 281 CKGRHYA 287
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 2 ASCEGEHY 9
A+CEGE Y
Sbjct: 284 ANCEGECY 291
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VASCEGEHYA 10
+A+C GEH+
Sbjct: 187 LAACVGEHHG 196
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQRY 60
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VASCEGEHYA 10
+A+C GEH+
Sbjct: 187 LAACVGEHHG 196
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQRY 60
>sp|NEF_HV2G1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQQY 60
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQRY 60
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 ASCEGEHY 9
A C GEH+
Sbjct: 164 APCMGEHW 171
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQQY 60
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQQY 60
>sp|NEF_HV2CA|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG+ Y
Sbjct: 54 SCEGQRY 60
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 ASCEGEHY 9
A C GEH+
Sbjct: 164 APCLGEHW 171
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 2 ASCEGEHY 9
A C GEH+
Sbjct: 162 APCLGEHW 169
>sp|NEF_HV2ST|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG Y
Sbjct: 54 SCEGRRY 60
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 ASCEGEHY 9
A C GEH+
Sbjct: 162 APCIGEHW 169
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 2 ASCEGEHY 9
A C GEH+
Sbjct: 164 APCIGEHW 171
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 ASCEGEHY 9
A C GEH+
Sbjct: 191 APCIGEHW 198
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 3 SCEGEHY 9
SCEG Y
Sbjct: 54 SCEGRQY 60
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 4 CEGEH 8
C+GEH
Sbjct: 289 CDGEH 293
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 CEGEH 8
C+GEH
Sbjct: 289 CDGEH 293
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 4 CEGEH 8
C+GEH
Sbjct: 288 CDGEH 292
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 4 CEGEH 8
C+GEH
Sbjct: 288 CDGEH 292
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VASCEGEHY 9
+A+C E Y
Sbjct: 201 IAACRAEEY 209
>sp|PG044_VACCC|PROTEIN K7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ASCEGEHY 9
A EG+HY
Sbjct: 79 AMSEGDHY 86
>sp|PG044_VACCA|PROTEIN K7|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ASCEGEHY 9
A EG+HY
Sbjct: 79 AMSEGDHY 86
>sp|PG044_MONPV|PROTEIN K7|Monkeypox virus (MPXV)
Query: 2 ASCEGEHY 9
A EG+HY
Sbjct: 79 AMSEGDHY 86
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 4 CEGEH 8
CEG+H
Sbjct: 221 CEGDH 225
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 4 CEGEH 8
CEG+H
Sbjct: 221 CEGDH 225
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SCEGEHYA 10
+C GEH A
Sbjct: 186 NCVGEHQA 193
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 SCEGEHYA 10
+C GEH A
Sbjct: 186 NCVGEHQA 193
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SCEGEHYA 10
+C GEH A
Sbjct: 186 NCVGEHQA 193
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 SCEGEHYA 10
+C GEH A
Sbjct: 186 NCVGEHQA 193
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CMGEHW 169
>sp|MATRX_VSIVN|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 ASCEGEHY 9
A CEG Y
Sbjct: 133 AHCEGRAY 140
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 ASCEGEHY 9
A CEG Y
Sbjct: 133 AHCEGRAY 140
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 5 EGEHY 9
EG+HY
Sbjct: 472 EGQHY 476
>sp|MATRX_VSIVS|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 ASCEGEHY 9
A CEG Y
Sbjct: 133 AHCEGRAY 140
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CVGEHW 169
>sp|NS7A_SARS2|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 1 VASCEGEHY 9
+A+CE HY
Sbjct: 12 LATCELYHY 20
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CLGEHW 169
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CLGEHW 169
>sp|MATRX_VSIVG|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 ASCEGEHY 9
A CEG Y
Sbjct: 133 AHCEGRAY 140
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 4 CEGEHY 9
C GEH+
Sbjct: 173 CIGEHW 178
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CIGEHW 169
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CIGEHW 169
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CIGEHW 169
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CIGEHW 169
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 4 CEGEHY 9
C GEH+
Sbjct: 164 CIGEHW 169
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 727 ANCFGQH 733
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 ASCEGEH 8
A+C G+H
Sbjct: 735 ANCFGQH 741
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 4 CEGEHYA 10
C G HY+
Sbjct: 379 CVGGHYS 385
76|SequenceR|385|376|GSAEFVASCE
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 EFVASCE 10
EF+ CE
Sbjct: 532 EFITDCE 538
77|SequenceR|390|381|AQTTTGSAEF
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 TTTGSAEF 10
TTT S EF
Sbjct: 507 TTTSSVEF 514
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 TTTGSAEF 10
TTT S EF
Sbjct: 507 TTTSSVEF 514
78|SequenceR|395|386|EDVRYAQTTT
>sp|PG204_VARV|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus
Query: 1 EDVRYAQT 8
+D++Y+QT
Sbjct: 198 DDIKYSQT 205
>sp|PG204_VAR67|SOLUBLE interferon alpha/beta receptor OPG204|Variola virus (isolate
Query: 1 EDVRYAQT 8
+D++Y+QT
Sbjct: 198 DDIKYSQT 205
>sp|PG204_VACCD|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain Dairen
Query: 1 EDVRYAQT 8
+D++Y+QT
Sbjct: 195 DDIKYSQT 202
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 EDVRYAQT 8
+DVRY+ T
Sbjct: 221 QDVRYSPT 228
>sp|PG204_VACCC|SOLUBLE interferon alpha/beta receptor OPG204|Vaccinia virus (strain
Query: 1 EDVRYAQT 8
+D++Y+QT
Sbjct: 197 DDIKYSQT 204
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EDVRYAQT 8
+DVRY+ T
Sbjct: 221 QDVRYSPT 228
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 1 EDVRYAQT 8
+DVRY+ T
Sbjct: 221 QDVRYSPT 228
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DVRYAQTT 9
D+RY Q T
Sbjct: 490 DLRYVQIT 497
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DVRYAQTT 9
D+RY Q T
Sbjct: 490 DLRYVQIT 497
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EDVRYAQT 8
+DVRY T
Sbjct: 226 QDVRYIAT 233
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EDVRYAQT 8
+DVRY T
Sbjct: 226 QDVRYIAT 233
79|SequenceR|400|391|QEAAREDVRY
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 1 QEAAREDVRY 10
EA R D RY
Sbjct: 109 PEATRSDARY 118
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 1 QEAAREDVRY 10
QE+ R DV +
Sbjct: 40 QESTRNDVAW 49
>sp|UL96_HCMVM|PROTEIN UL96|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AAREDVRY 10
AARE RY
Sbjct: 47 AAREQTRY 54
>sp|UL96_HCMVA|PROTEIN UL96|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AAREDVRY 10
AARE RY
Sbjct: 47 AAREQTRY 54
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 EAAREDVR 9
EAA DVR
Sbjct: 1336 EAAHSDVR 1343
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 EAAREDVR 9
EAA DVR
Sbjct: 1336 EAAHSDVR 1343
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 EAAREDVR 9
EAA DVR
Sbjct: 1335 EAAHTDVR 1342
80|SequenceR|405|396|AEWRAQEAAR
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 AEWRAQEAAR 10
A W AQE R
Sbjct: 2 ASWEAQEELR 11
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 3 WRAQEAAR 10
+RAQ AAR
Sbjct: 189 YRAQRAAR 196
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 EWRAQEA 8
+WRA+ A
Sbjct: 126 QWRAENA 132
>sp|UL56_HHV11|PROTEIN UL56|Human herpesvirus 1 (strain 17)
Query: 3 WRAQEAAR 10
+RAQ AAR
Sbjct: 188 YRAQRAAR 195
81|SequenceR|410|401|TEKSAAEWRA
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 TEKSAAEW 8
+EK AEW
Sbjct: 653 SEKGYAEW 660
82|SequenceR|415|406|TTKKITEKSA
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 TTKKITEKS 9
TT+K +E+S
Sbjct: 48 TTRKTSERS 56
83|SequenceR|420|411|RPCPKTTKKI
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 RPCPK 5
+PCPK
Sbjct: 460 KPCPK 464
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 2 PCPKTTK 8
PCP T+K
Sbjct: 602 PCPLTSK 608
>sp|HEMA_VACCT|PROTEIN OPG185|Vaccinia virus (strain Tian Tan)
Query: 2 PCPKTTKKI 10
P P+T+KKI
Sbjct: 18 PSPQTSKKI 26
>sp|HEMA_MONPV|PROTEIN OPG185|Monkeypox virus (MPXV)
Query: 2 PCPKTTKKI 10
P P+T+KKI
Sbjct: 18 PSPQTSKKI 26
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 RPCPKTTK 8
R CPKT +
Sbjct: 34 RHCPKTAR 41
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RPCPKTT 7
+ CPKTT
Sbjct: 195 QACPKTT 201
>sp|HEMA_CWPXG|PROTEIN OPG185|Cowpox virus (strain GRI-90 /
Query: 2 PCPKTTKKI 10
P P+T+KKI
Sbjct: 18 PSPQTSKKI 26
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 3 CPKTTKKI 10
CPK K+I
Sbjct: 751 CPKALKRI 758
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 1 RPCPKTTK 8
+P P TTK
Sbjct: 136 KPAPPTTK 143
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 PCPKTTKK 9
P P+TTK+
Sbjct: 760 PAPRTTKQ 767
>sp|HEMA_VACCA|PROTEIN OPG185|Vaccinia virus (strain Ankara) (VACV)
Query: 2 PCPKTTKKI 10
P P+T+KKI
Sbjct: 18 PFPQTSKKI 26
>sp|HEMA_VACCI|PROTEIN OPG185|Vaccinia virus (strain IHD-J) (VACV)
Query: 2 PCPKTTKKI 10
P P+T+KKI
Sbjct: 18 PFPQTSKKI 26
>sp|HEMA_VACCC|PROTEIN OPG185|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PCPKTTKKI 10
P P+T+KKI
Sbjct: 18 PFPQTSKKI 26
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 PCPKTTKK 9
P P+TTK+
Sbjct: 760 PAPRTTKQ 767
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 2 PCPKTTK 8
P P+TTK
Sbjct: 760 PAPRTTK 766
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 PCPKTTK 8
P P+TTK
Sbjct: 761 PAPRTTK 767
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 5 KTTKKI 10
KTTKKI
Sbjct: 460 KTTKKI 465
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RPCPKTT 7
+ CPKT+
Sbjct: 196 QACPKTS 202
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 PCPKTTK 8
P P+TTK
Sbjct: 761 PAPRTTK 767
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 PCPKTTK 8
P P+TTK
Sbjct: 760 PAPRTTK 766
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RPCPKTT 7
+PC K+T
Sbjct: 118 KPCVKST 124
>sp|VE4_HPV2A|PROTEIN E4|Human papillomavirus type 2a
Query: 1 RPCPKTTK 8
RP P+TT
Sbjct: 8 RPAPRTTN 15
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PCPKTTKK 9
P P TKK
Sbjct: 1482 PSPAATKK 1489
84|SequenceR|425|416|VPVHCRPCPK
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 PVHCRPCP 9
P C PCP
Sbjct: 660 PYACGPCP 667
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 VHCRPC 8
V CRPC
Sbjct: 431 VRCRPC 436
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 PVHCRPCP 9
P C PCP
Sbjct: 660 PYACGPCP 667
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 PVHCRPCP 9
P C PCP
Sbjct: 660 PYACGPCP 667
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 PVHCRPCP 9
P C PCP
Sbjct: 660 PYTCGPCP 667
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 2 PVHCRPCP 9
P C PCP
Sbjct: 660 PYTCGPCP 667
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VPVHCRPC 8
VPVH R C
Sbjct: 29 VPVHVRAC 36
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VPVHCRPC 8
VPVH R C
Sbjct: 29 VPVHVRAC 36
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 VPVHCRPCP 9
VP++ R CP
Sbjct: 507 VPIYFRECP 515
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPAP 220
>sp|UL91_HCMVM|PROTEIN UL91|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CRPCPK 10
CRPCP
Sbjct: 82 CRPCPS 87
>sp|UL91_HCMVA|PROTEIN UL91|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CRPCPK 10
CRPCP
Sbjct: 82 CRPCPS 87
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 223 PVHAGPIP 230
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 217 PVHAGPIP 224
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 217 PVHAGPIP 224
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 VPVHCRP 7
+ VHC P
Sbjct: 596 ITVHCEP 602
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VPVHCRP 7
+ VHC P
Sbjct: 596 ITVHCEP 602
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VPVHCRP 7
+ VHC P
Sbjct: 597 ITVHCEP 603
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VPVHCRP 7
+ VHC P
Sbjct: 597 ITVHCEP 603
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 VPVHCRP 7
+ VHC P
Sbjct: 597 ITVHCEP 603
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPIP 220
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPIP 220
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 5 CRPC 8
CRPC
Sbjct: 429 CRPC 432
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 219 PVHAGPIP 226
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPIP 220
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPAP 220
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 VPVHCRPCP 9
VP+ R CP
Sbjct: 523 VPIKYRECP 531
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 VPVHCRPCP 9
VP+ R CP
Sbjct: 523 VPIKYRECP 531
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 PVHCRPCPK 10
P C+ C K
Sbjct: 300 PQQCKKCEK 308
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CRPCP 9
CR CP
Sbjct: 5765 CRRCP 5769
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 CRPCP 9
CR CP
Sbjct: 5742 CRRCP 5746
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 223 PVHAGPIP 230
>sp|US09_HCMVM|MEMBRANE glycoprotein US9|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 VHCRPCPK 10
+HCRP +
Sbjct: 162 LHCRPASR 169
>sp|US09_HCMVA|UNIQUE short US9 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 VHCRPCPK 10
+HCRP +
Sbjct: 162 LHCRPASR 169
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 217 PVHAGPIP 224
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPIP 220
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 PVHCR 6
P+HCR
Sbjct: 567 PIHCR 571
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 217 PVHAGPIP 224
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 PVHCRP 7
P HC P
Sbjct: 45 PEHCSP 50
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 6 RPCP 9
RPCP
Sbjct: 123 RPCP 126
>sp|NS12_CVHN5|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N5)
Query: 4 HCRPC 8
+C+PC
Sbjct: 31 YCQPC 35
>sp|NS12_CVHN2|NON-STRUCTURAL protein 4|Human coronavirus HKU1 (isolate N2)
Query: 4 HCRPC 8
+C+PC
Sbjct: 31 YCQPC 35
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 6 RPCP 9
RPCP
Sbjct: 119 RPCP 122
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 6 RPCP 9
RPCP
Sbjct: 119 RPCP 122
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 219 PVHAGPIP 226
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPIP 220
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 PVHCRPCP 9
PVH P P
Sbjct: 213 PVHAGPIP 220
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 VPVHCRPC 8
VP+ PC
Sbjct: 351 VPLRTEPC 358
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 6 RPCP 9
RPCP
Sbjct: 123 RPCP 126
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 6 RPCP 9
RPCP
Sbjct: 119 RPCP 122
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 PVHCRP 7
P HC P
Sbjct: 74 PEHCSP 79
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 1 VPVHC 5
+P+HC
Sbjct: 378 IPIHC 382
85|SequenceR|430|421|GGNKEVPVHC
>sp|NCAP_LASSJ|NUCLEOPROTEIN virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 GGNKEVPVHC 10
GG +E+ HC
Sbjct: 520 GGKEEITPHC 529
>sp|NCAP_LASSG|NUCLEOPROTEIN virus (strain GA391) (LASV)
Query: 1 GGNKEVPVHC 10
GG +E+ HC
Sbjct: 521 GGKEEITPHC 530
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 3 NKEVPVHC 10
NK VP+ C
Sbjct: 68 NKNVPIPC 75
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 3 NKEVPVHC 10
NK VP+ C
Sbjct: 68 NKNVPIPC 75
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NKEVPVHC 10
NK VP+ C
Sbjct: 68 NKNVPIPC 75
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 3 NKEVPVHC 10
NK VP+ C
Sbjct: 67 NKNVPIPC 74
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NKEVPVHC 10
NK VP+ C
Sbjct: 68 NKNVPIPC 75
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 EVPVHC 10
E P+HC
Sbjct: 2514 EAPLHC 2519
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 EVPVHC 10
E P+HC
Sbjct: 2514 EAPLHC 2519
>sp|VE4_HPV39|PROTEIN E4|Human papillomavirus 39
Query: 2 GNKEVPV 8
N+EVPV
Sbjct: 2 ANREVPV 8
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 GGNKEVPVHC 10
G N EV ++C
Sbjct: 251 GSNLEVEINC 260
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 GGNKEVPVHC 10
G N EV ++C
Sbjct: 251 GSNLEVEINC 260
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 GNKEVPV 8
GN EVP+
Sbjct: 366 GNDEVPM 372
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 1 GGNKEVP 7
GG++E+P
Sbjct: 208 GGSRELP 214
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 GGNKEVPV 8
GG+ +VP+
Sbjct: 516 GGSSQVPI 523
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GGNKEVPVH 9
G KE+P+H
Sbjct: 406 GTIKEIPLH 414
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 GGNKEVPVH 9
G KE+P+H
Sbjct: 406 GTIKEIPLH 414
>sp|ORF23_HHV8P|PROTEIN ORF23|Human herpesvirus 8 type P
Query: 1 GGNKEVPVH 9
G + VP+H
Sbjct: 142 AGCRRVPIH 150
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain Copenhagen)
Query: 2 GNKEVPVH 9
G+K++P++
Sbjct: 128 GSKKIPIY 135
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 2 GNKEVPVH 9
G+K++P++
Sbjct: 128 GSKKIPIY 135
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 GNKEVPVH 9
G KE PV+
Sbjct: 53 GEKEQPVY 60
>sp|CAPSD_TTVVG|PROBABLE capsid and replication-associated protein|Torque teno virus
Query: 1 GGNKEVPV 8
GG+ VP+
Sbjct: 533 GGSSNVPI 540
>sp|CAPSD_TTVV2|CAPSID protein|Torque teno virus (isolate Human/Japan/TRM1/1999)
Query: 1 GGNKEVPV 8
GG+ VP+
Sbjct: 533 GGSSNVPI 540
>sp|CAPSD_TTVV1|PROBABLE capsid and replication-associated protein|Torque teno virus (strain
Query: 1 GGNKEVPV 8
GG+ VP+
Sbjct: 533 GGSSNVPI 540
>sp|CAPSD_TTVA1|CAPSID protein|Torque teno virus 1 (isolate
Query: 1 GGNKEVPV 8
GG+ VP+
Sbjct: 533 GGSSNVPI 540
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 2 GNKEVPV 8
G K+VP+
Sbjct: 101 GRKDVPI 107
86|SequenceR|435|426|KMHMCGGNKE
>sp|SPIKE_ADE31|FIBER protein|Human adenovirus A serotype 31
Query: 1 KMHMCGGNK 9
K H+ GGN+
Sbjct: 270 KAHVAGGNE 278
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KMHMCGGN 8
+M MCGG+
Sbjct: 5057 EMVMCGGS 5064
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 KMHMCGGN 8
+M MCGG+
Sbjct: 5034 EMVMCGGS 5041
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 3 HMCGGNKE 10
H GG+KE
Sbjct: 350 HATGGDKE 357
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 3 HMCGGNKE 10
H GG+KE
Sbjct: 351 HATGGDKE 358
Query: 5 CGGN 8
CGGN
Sbjct: 1098 CGGN 1101
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 HMCG 6
HMCG
Sbjct: 824 HMCG 827
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 HMCG 6
HMCG
Sbjct: 824 HMCG 827
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 HMCG 6
HMCG
Sbjct: 824 HMCG 827
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 HMCGGN 8
H+CG N
Sbjct: 5662 HVCGDN 5667
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 HMCGGN 8
HMC G+
Sbjct: 189 HMCAGH 194
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KMHMCGGN 8
K CGGN
Sbjct: 558 KSDYCGGN 565
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 HMCGGN 8
HMC G+
Sbjct: 189 HMCAGH 194
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 HMCGG 7
H CGG
Sbjct: 650 HRCGG 654
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 HMCGG 7
H CGG
Sbjct: 650 HRCGG 654
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 HMCGG 7
H CGG
Sbjct: 650 HRCGG 654
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 3 HMCGGN 8
H+C GN
Sbjct: 186 HLCIGN 191
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 3 HMCGGN 8
H+C GN
Sbjct: 186 HLCIGN 191
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 HMCGGN 8
HMC G+
Sbjct: 589 HMCKGS 594
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 KMHMCGGN 8
++H GGN
Sbjct: 725 QLHKVGGN 732
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 CGGN 8
CGGN
Sbjct: 211 CGGN 214
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 HMCGGNKE 10
+ CG N+E
Sbjct: 281 YKCGKNRE 288
87|SequenceR|440|431|QPQPCKMHMC
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 QPQPC 5
QP+PC
Sbjct: 110 QPRPC 114
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 1 QPQPC 5
QP+PC
Sbjct: 45 QPEPC 49
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 1 QPQPC 5
QP+PC
Sbjct: 45 QPEPC 49
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 PQPCKMH 8
P P +MH
Sbjct: 1094 PHPLEMH 1100
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 PQPCKMHMC 10
P P +H C
Sbjct: 274 PNPSTIHHC 282
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 PQPCKMH 8
P CKMH
Sbjct: 421 PFMCKMH 427
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PQPCKMH 8
P P +MH
Sbjct: 1104 PHPLEMH 1110
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QPCKMHMC 10
QP +H C
Sbjct: 207 QPIPIHYC 214
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QPCKMHMC 10
QP +H C
Sbjct: 205 QPIPIHYC 212
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 QPCKMHMC 10
QP +H C
Sbjct: 213 QPIPIHYC 220
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 PQPCKMH 8
P P +MH
Sbjct: 1104 PHPLEMH 1110
>sp|VP12_CTFVL|UNCHARACTERIZED protein VP12|Colorado tick fever virus (strain
Query: 2 PQPCKMHMC 10
P P H+C
Sbjct: 151 PPPASPHIC 159
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 5 CKMHMC 10
CK H C
Sbjct: 195 CKTHTC 200
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 5 CKMH 8
CKMH
Sbjct: 499 CKMH 502
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 5 CKMH 8
CKMH
Sbjct: 499 CKMH 502
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QPQPCKM 7
+PQ CK+
Sbjct: 560 EPQDCKL 566
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 QPQPCKM 7
+PQ CK+
Sbjct: 561 EPQDCKL 567
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QPQPCKM 7
+PQ CK+
Sbjct: 561 EPQDCKL 567
88|SequenceR|445|436|WELRCQPQPC
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 WELRCQ 6
W LRCQ
Sbjct: 1313 WHLRCQ 1318
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 WELRCQPQ 8
WEL PQ
Sbjct: 1821 WELGLSPQ 1828
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2167 QLSCEPEP 2174
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 WELRC 5
W LRC
Sbjct: 1314 WHLRC 1318
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 ELRCQPQP 9
ELR +P P
Sbjct: 272 ELRFEPAP 279
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 WELRC 5
W LRC
Sbjct: 1313 WHLRC 1317
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 WELRC 5
W LRC
Sbjct: 1314 WHLRC 1318
>sp|X_HBVC3|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 LRCQPQPC 10
++C PC
Sbjct: 402 IKCNSSPC 409
>sp|REX_HTL3P|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 WELRCQP 7
WE CQP
Sbjct: 144 WESSCQP 150
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2163 QLPCEPEP 2170
Query: 2 ELRCQPQP 9
E +C PQP
Sbjct: 2071 EGQCAPQP 2078
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2161 QLPCEPEP 2168
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2163 QLPCEPEP 2170
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2160 QLPCEPEP 2167
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2164 QLPCEPEP 2171
>sp|REX_HTL32|PROTEIN Rex|Human T-cell leukemia virus 3
Query: 1 WELRCQP 7
WE CQP
Sbjct: 144 WESSCQP 150
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2157 QLPCEPEP 2164
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2160 QLPCEPEP 2167
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|X_HBVC7|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVF2|PROTEIN X|Hepatitis B virus genotype F1
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVC2|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2163 QLPCEPEP 2170
>sp|X_HBVF6|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2164 QLPCEPEP 2171
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2165 QLPCEPEP 2172
>sp|X_HBVC1|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVD7|PROTEIN X|Hepatitis B virus genotype D
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVD2|PROTEIN X|Hepatitis B virus genotype D
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVCJ|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVC9|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVB8|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVB2|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 WELRCQPQP 9
W L QP P
Sbjct: 55 WPLYRQPSP 63
>sp|X_HBVB7|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2160 QLPCEPEP 2167
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2165 QLPCEPEP 2172
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2163 QLPCEPEP 2170
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2159 QLPCEPEP 2166
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2164 QLPCEPEP 2171
>sp|X_HBVD6|PROTEIN X|Hepatitis B virus genotype D
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVD3|PROTEIN X|Hepatitis B virus genotype D
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVF4|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVB6|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVB1|PROTEIN X|Hepatitis B virus genotype B1
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVF1|PROTEIN X|Hepatitis B virus genotype F2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVB4|PROTEIN X|Hepatitis B virus genotype B/C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVA2|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVH1|PROTEIN X|Hepatitis B virus genotype H
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVB3|PROTEIN X|Hepatitis B virus genotype B2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 ELRCQPQP 9
+L C+P+P
Sbjct: 2163 QLPCEPEP 2170
>sp|X_HBVE2|PROTEIN X|Hepatitis B virus genotype E
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVE1|PROTEIN X|Hepatitis B virus genotype E
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVA3|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVH3|PROTEIN X|Hepatitis B virus genotype H
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|X_HBVD5|PROTEIN X|Hepatitis B virus genotype D
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVD4|PROTEIN X|Hepatitis B virus genotype D
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVA7|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 2 ELRCQ 6
ELRCQ
Sbjct: 546 ELRCQ 550
>sp|X_HBVA4|PROTEIN X|Hepatitis B virus genotype A2
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 WELRC 5
WE RC
Sbjct: 15 WECRC 19
>sp|X_HBVE3|PROTEIN X|Hepatitis B virus genotype E
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCAPAPC 148
>sp|X_HBVH2|PROTEIN X|Hepatitis B virus genotype H
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCSPAPC 148
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 LRCQPQPC 10
LRCQ PC
Sbjct: 137 LRCQSFPC 144
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 WELRCQPQP 9
W++ QP P
Sbjct: 23 WQVSMQPTP 31
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 1 WELRCQPQP 9
W L QP P
Sbjct: 73 WPLYRQPPP 81
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 WELRCQP 7
W L C P
Sbjct: 422 WTLLCTP 428
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 1 WELRCQP 7
W L C P
Sbjct: 422 WTLLCTP 428
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 1 WELRCQPQP 9
W L QP P
Sbjct: 73 WPLYRQPPP 81
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 ELRCQPQP 9
+L C P+P
Sbjct: 2163 QLPCDPEP 2170
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 ELRCQPQP 9
+L C P+P
Sbjct: 2163 QLPCDPEP 2170
>sp|X_HBVE4|PROTEIN X|Hepatitis B virus genotype E
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCVPAPC 148
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 ELRCQPQP 9
+L C P+P
Sbjct: 2163 QLPCDPEP 2170
>sp|X_HBVC0|PROTEIN X|Hepatitis B virus genotype C
Query: 2 ELRCQPQPC 10
+L C P PC
Sbjct: 140 KLVCVPAPC 148
>sp|US19_HCMVM|TRANSMEMBRANE protein US19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LRCQPQP 9
L CQP P
Sbjct: 114 LMCQPSP 120
>sp|M2_I75A0|MATRIX protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 WELRC 5
WE RC
Sbjct: 15 WECRC 19
>sp|US19_HCMVT|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 LRCQPQP 9
L CQP P
Sbjct: 114 LMCQPSP 120
>sp|US19_HCMVA|TRANSMEMBRANE protein HWLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LRCQPQP 9
L CQP P
Sbjct: 114 LMCQPSP 120
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 WELRCQPQP 9
W++ QP P
Sbjct: 23 WQVPMQPTP 31
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 3 LRCQPQPC 10
RC P PC
Sbjct: 10 FRCLPVPC 17
89|SequenceR|450|441|GCNWCWELRC
>sp|VP2_ROTHD|INNER capsid protein VP2|Rotavirus A (strain RVA/Human/United
Query: 4 WCWELR 9
WCW+L+
Sbjct: 145 WCWKLK 150
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 WCWEL 8
WCW+L
Sbjct: 147 WCWKL 151
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 WCWEL 8
WCW+L
Sbjct: 147 WCWKL 151
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 CNWC 5
CNWC
Sbjct: 2255 CNWC 2258
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CNWC 5
CNWC
Sbjct: 2255 CNWC 2258
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GCNWCWELRC 10
CNW + RC
Sbjct: 644 ACNWTYGERC 653
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GLNWVYKLR 117
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVE|MATRIX protein|Rabies virus (strain ERA) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVA|MATRIX protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_ABLVH|MATRIX protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVC|MATRIX protein|Rabies virus (strain CVS-11) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_ABLVB|MATRIX protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 119 GMNWVYKLR 127
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GCNWCW 6
GCNW +
Sbjct: 978 GCNWTF 983
>sp|MATRX_RABVR|MATRIX protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 4 WCWEL 8
WCW L
Sbjct: 770 WCWTL 774
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 GCNWCWELR 9
G NW ++LR
Sbjct: 109 GMNWVYKLR 117
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 5 CWELRC 10
CW RC
Sbjct: 329 CWRNRC 334
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 647 ACNWTRGERC 656
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 645 ACNWTRGERC 654
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 651 ACNWTRGERC 660
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 GCNWCWELRC 10
GC +C++ C
Sbjct: 2484 GCLFCYKRNC 2493
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 648 ACNWTRGERC 657
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 GCNWCWELRC 10
GC +C++ C
Sbjct: 2434 GCLFCYKRNC 2443
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 GCNWCWELRC 10
GC +C++ C
Sbjct: 2454 GCLFCYKRNC 2463
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 641 ACNWTRGERC 650
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 GCNWCWELRC 10
GC +C++ C
Sbjct: 2454 GCLFCYKRNC 2463
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 GCNWCWELRC 10
GC +C++ C
Sbjct: 2484 GCLFCYKRNC 2493
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 644 ACNWTRGERC 653
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 649 ACNWTRGERC 658
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 NWCWELR 9
NW W ++
Sbjct: 732 NWIWYMK 738
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 GCNWCWELRC 10
GC +C++ C
Sbjct: 2434 GCLFCYKRNC 2443
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 649 ACNWTRGERC 658
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 NWCWE 7
NW WE
Sbjct: 2052 NWTWE 2056
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 647 ACNWTRGERC 656
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 648 ACNWTRGERC 657
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GCNWCWELRC 10
CNW RC
Sbjct: 643 ACNWTRGERC 652
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 NWCWEL 8
NW W L
Sbjct: 2866 NWLWAL 2871
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 NWCWEL 8
NW W L
Sbjct: 2866 NWLWTL 2871
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 NWCWEL 8
NW W L
Sbjct: 2866 NWLWAL 2871
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 NWCWEL 8
NW W L
Sbjct: 2866 NWLWAL 2871
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 NWCWEL 8
NW W L
Sbjct: 2866 NWLWAL 2871
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 GCNWCWELRC 10
CN W+ C
Sbjct: 606 ACNVYWQAPC 615
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 4 WCWEL 8
WC+EL
Sbjct: 142 WCYEL 146
>sp|Z_GTOVV|RING finger protein Z|Guanarito mammarenavirus (isolate
Query: 2 CNWCWE 7
CN CWE
Sbjct: 73 CNICWE 78
>sp|M2_I75A0|MATRIX protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I40A0|MATRIX protein 2|Influenza A virus (strain A/Hickox/1940
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 WELRC 10
WE RC
Sbjct: 18 WECRC 22
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 6 WELRC 10
WE RC
Sbjct: 15 WECRC 19
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 6 WELRC 10
WE RC
Sbjct: 13 WECRC 17
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 NWCWELRC 10
+W W + C
Sbjct: 2901 DWLWAVLC 2908
>sp|TAT_HV192|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 GCNWCWELRC 10
CN C+ RC
Sbjct: 21 ACNNCYCKRC 30
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 6 WELRC 10
WEL C
Sbjct: 641 WELLC 645
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 GCNWCWELR 9
GC+ W+ R
Sbjct: 773 GCSLSWKQR 781
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 CNWCWELRC 10
C W +++C
Sbjct: 251 CGWRIQVQC 259
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CNWCWELR 9
C+W EL+
Sbjct: 863 CHWGQELK 870
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 1 GCNWCWELRC 10
C +CW LRC
Sbjct: 132 SCQYCW-LRC 140
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 CNWCWELR 9
C+W EL+
Sbjct: 540 CHWGQELK 547
90|SequenceR|455|446|RNWECGCNWC
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 RNWECGCNWC 10
RNW C WC
Sbjct: 1189 RNWRCNPTWC 1198
>sp|M2_I75A0|MATRIX protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 3 WECGCN 8
WEC CN
Sbjct: 15 WECRCN 20
>sp|M2_I40A0|MATRIX protein 2|Influenza A virus (strain A/Hickox/1940
Query: 3 WECGCN 8
WEC CN
Sbjct: 15 WECRCN 20
>sp|M2_I67A2|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 WECGCN 8
WEC CN
Sbjct: 15 WECRCN 20
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 RNWECGCN 8
R+ EC CN
Sbjct: 209 RSQECKCN 216
>sp|M2_I000F|MATRIX protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECSCS 20
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 NWECGC 7
+WE GC
Sbjct: 1230 DWEVGC 1235
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 2 NWECGC 7
+WE GC
Sbjct: 1230 DWEVGC 1235
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 WECG 6
WECG
Sbjct: 2091 WECG 2094
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 WECG 6
WECG
Sbjct: 2090 WECG 2093
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 2 NWEC-GC 7
NWEC GC
Sbjct: 247 NWECTGC 253
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECKCS 20
>sp|M2_I01A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 18 WECRCS 23
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1816 RSWNTGFDW 1824
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1816 RSWNTGFDW 1824
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1816 RSWNTGFDW 1824
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1816 RSWNTGFDW 1824
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1816 RSWNTGFDW 1824
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 3 WECGCN 8
WEC C+
Sbjct: 8 WECKCS 13
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 RNWECG 6
R W+CG
Sbjct: 1543 RFWDCG 1548
>sp|M2_I05A1|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|M2_I03A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 5 CGCNWC 10
CG WC
Sbjct: 38 CGRGWC 43
>sp|M2_I02A6|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 GCNW 9
GCNW
Sbjct: 978 GCNW 981
>sp|M2_I01A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|M2_I00A0|MATRIX protein 2|Influenza A virus (strain A/Duck/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1818 RSWNSGYDW 1826
>sp|M2_I03A0|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RNWECGCNW 9
R+W G +W
Sbjct: 1818 RSWNSGYDW 1826
>sp|M2_I02A7|MATRIX protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 3 WECGCN 8
WEC C+
Sbjct: 13 WECRCS 18
>sp|M2_I02A5|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|M2_I02A0|MATRIX protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|M2_I02A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLQCNRC 1320
>sp|M2_I01A1|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 3 WECGCN 8
WEC C+
Sbjct: 15 WECRCS 20
>sp|M2_I96A3|MATRIX protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I00A1|MATRIX protein 2|Influenza A virus (strain A/New
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 5 CGCNW 9
C C+W
Sbjct: 265 CDCDW 269
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 5 CGCNW 9
C C+W
Sbjct: 227 CDCDW 231
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 5 CGCNW 9
C C+W
Sbjct: 262 CDCDW 266
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 5 CGCNW 9
C C+W
Sbjct: 290 CDCDW 294
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 5 CGCNW 9
C C+W
Sbjct: 290 CDCDW 294
>sp|M2_I07A0|MATRIX protein 2|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 WECGCN 8
W C CN
Sbjct: 12 WGCRCN 17
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1312 HWHLRCNRC 1320
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 5 CGCNWC 10
C CN C
Sbjct: 536 CRCNLC 541
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 5 CGCNWC 10
C CN C
Sbjct: 534 CRCNLC 539
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 5 CGCNWC 10
C CN C
Sbjct: 551 CRCNLC 556
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 WECGC 7
W CGC
Sbjct: 821 WGCGC 825
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCKCN 20
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 5 CGCNWC 10
C CN C
Sbjct: 567 CRCNLC 572
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 WECGC 7
W CGC
Sbjct: 821 WGCGC 825
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 NWECGCNWC 10
+W CN C
Sbjct: 1313 HWHLRCNKC 1321
>sp|M2_I88A5|MATRIX protein 2|Influenza A virus (strain A/Swine/Iowa/17672/1988
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCKCN 20
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 5 CGCNWC 10
C CN C
Sbjct: 567 CRCNLC 572
>sp|M2_I76A6|MATRIX protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I60A0|MATRIX protein 2|Influenza A virus (strain A/Ann
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I77A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I71A1|MATRIX protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I57A5|MATRIX protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I68A5|MATRIX protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I73A5|MATRIX protein 2|Influenza A virus (strain A/Port
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I72A8|MATRIX protein 2|Influenza A virus (strain A/Udorn/1972
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I72A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I72A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I72A2|MATRIX protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I70A0|MATRIX protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I68A6|MATRIX protein 2|Influenza A virus (strain A/Northern
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I68A4|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I68A0|MATRIX protein 2|Influenza A virus (strain A/Aichi/2/1968
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 2 NWECGCNW 9
NWE C++
Sbjct: 140 NWEKKCDF 147
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 RNWEC 5
R WEC
Sbjct: 767 RGWEC 771
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 ECGCNW 9
E GC W
Sbjct: 2065 EFGCRW 2070
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 ECGCNW 9
E GC W
Sbjct: 2094 EFGCRW 2099
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I67A0|MATRIX protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 WECGCNW 9
WE CN+
Sbjct: 399 WEGDCNY 405
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RNWECG 6
R W CG
Sbjct: 390 RYWNCG 395
>sp|M2_I89A2|MATRIX protein 2|Influenza A virus (strain A/Beijing/353/1989
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I88A3|MATRIX protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I83A8|MATRIX protein 2|Influenza A virus (strain A/Hong
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I54A2|MATRIX protein 2|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I54A1|MATRIX protein 2|Influenza A virus (strain A/Swine/May/1954
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I51A0|MATRIX protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I50A0|MATRIX protein 2|Influenza A virus (strain A/Fort
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I43A0|MATRIX protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I80A4|MATRIX protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I79A0|MATRIX protein 2|Influenza A virus (strain A/Bangkok/1/1979
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I81A4|MATRIX protein 2|Influenza A virus (strain A/Swine/Ontario/2/1981
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I78A8|MATRIX protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I78A7|MATRIX protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I61A1|MATRIX protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I57A1|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I57A0|MATRIX protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I83A1|MATRIX protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I82A9|MATRIX protein 2|Influenza A virus (strain A/Philippines/2/1982
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I80AA|MATRIX protein 2|Influenza A virus (strain A/India/6263/1980
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I96A2|MATRIX protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I57A3|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I57A2|MATRIX protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 RNWECGCNW 9
R W G +W
Sbjct: 1845 RAWSSGFDW 1853
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 RNWECGCNW 9
R W G +W
Sbjct: 1845 RAWSSGFDW 1853
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 5 CGCNWC 10
C CN+C
Sbjct: 462 CVCNFC 467
>sp|M2_I69A0|MATRIX protein 2|Influenza A virus (strain A/England/878/1969
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RNWECGCNW 9
RNW+ NW
Sbjct: 8 RNWQTLGNW 16
>sp|M2_I77AB|MATRIX protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I77AA|MATRIX protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I45A0|MATRIX protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I37A0|MATRIX protein 2|Influenza A virus (strain A/Swine/29/1937
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I36A0|MATRIX protein 2|Influenza A virus (strain A/Henry/1936
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I18A0|MATRIX protein 2|Influenza A virus (strain A/Brevig
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 RNWECGCNW 9
R W G +W
Sbjct: 1841 RAWSSGFDW 1849
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RNWECG 6
R W CG
Sbjct: 391 RCWNCG 396
>sp|M2_I35A3|MATRIX protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I34A1|MATRIX protein 2|Influenza A virus (strain A/Puerto
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RNWECG 6
R W CG
Sbjct: 390 RCWNCG 395
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 4 ECGC 7
ECGC
Sbjct: 17 ECGC 20
>sp|M2_I06A0|MATRIX protein 2|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I000X|MATRIX protein 2|Influenza A virus (strain A/X-31
Query: 3 WECGCN 8
W C CN
Sbjct: 15 WGCRCN 20
>sp|M2_I56A3|MATRIX protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 3 WECGCN 8
WEC CN
Sbjct: 15 WECRCN 20
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RNWECG 6
R W CG
Sbjct: 390 RYWNCG 395
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 WECGCN 8
W+ CN
Sbjct: 729 WQSACN 734
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 5 CGCNW 9
C C+W
Sbjct: 1970 CSCSW 1974
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 4 ECGCNWC 10
EC N+C
Sbjct: 172 ECNSNFC 178
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RNWECG 6
R W CG
Sbjct: 390 RCWNCG 395
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 RNWECG 6
R W CG
Sbjct: 391 RCWNCG 396
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 3 WECGCNW 9
WE CN+
Sbjct: 400 WEGDCNF 406
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 RNWECGC 7
R W GC
Sbjct: 391 RGWNNGC 397
>sp|LAP_YLDV|E3 ubiquitin-protein ligase LAP|Yaba-like disease virus (YLDV)
Query: 1 RNWECGCN 8
RN CGCN
Sbjct: 15 RNNFCGCN 22
91|SequenceR|465|451|VDFWHDGMCVRNWEC
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSQAFRN 363
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSQAFRN 363
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSQAFRN 363
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 353 VDYWDDSQAFRN 364
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 353 VDYWDDSQAFRN 364
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 353 VDYWDDSQAFRN 364
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
VD+W D RN
Sbjct: 352 VDYWDDSKAFRN 363
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 353 IDYWDDSQAFRN 364
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 353 IDYWDDSQAFRN 364
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 352 IDYWDDSQAFRN 363
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 353 IDYWDDSQAFRN 364
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 9 CVRNWE 14
CV+NWE
Sbjct: 443 CVKNWE 448
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 9 CVRNWE 14
CV+NWE
Sbjct: 443 CVKNWE 448
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 352 IDYWDDSKAFRN 363
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 352 IDYWDDSKAFRN 363
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHDGMCVRN 12
+D+W D RN
Sbjct: 352 IDYWDDSKAFRN 363
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4353 FWRDGSC 4359
Query: 6 DGMCVRNWEC 15
D CV W+C
Sbjct: 1142 DWQCVAYWKC 1151
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4353 FWRDGSC 4359
Query: 6 DGMCVRNWEC 15
D CV W+C
Sbjct: 1142 DWQCVAYWKC 1151
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4391 FWRDGSC 4397
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4411 FWRDGSC 4417
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4441 FWRDGSC 4447
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4391 FWRDGSC 4397
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4411 FWRDGSC 4417
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4441 FWRDGSC 4447
>sp|UL38_HCMVM|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FWHDGMCVRNW 13
FWH + + W
Sbjct: 142 FWHGAIVLEYW 152
>sp|UL38_HCMVA|APOPTOSIS inhibitor UL38|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FWHDGMCVRNW 13
FWH + + W
Sbjct: 142 FWHGAIVLEYW 152
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 7 GMCVRNWEC 15
G +RNW C
Sbjct: 1092 GRTIRNWCC 1100
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 VDFWH 5
+DFWH
Sbjct: 169 LDFWH 173
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 VDFWHDGMCVR 11
+ +H G C+R
Sbjct: 623 IGIYHTGHCIR 633
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VDFWHDGMCVR 11
+ +H G C+R
Sbjct: 623 IGIYHTGHCIR 633
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 2 DFWHDGMCV 10
D+ DGMCV
Sbjct: 406 DYRVDGMCV 414
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 VDFWHDG 7
+D+W DG
Sbjct: 410 IDYWDDG 416
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 WHDGMC 9
W DG+C
Sbjct: 844 WEDGIC 849
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 WHDGMC 9
W DG+C
Sbjct: 844 WEDGIC 849
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 VDFWHDGMCVRN 12
+D+W D +N
Sbjct: 362 IDYWDDSEIFKN 373
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2690 HGGMLVRN 2697
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2690 HGGMLVRN 2697
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2690 HGGMLVRN 2697
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2690 HGGMLVRN 2697
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2690 HGGMLVRN 2697
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2693 HGGMLVRN 2700
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2693 HGGMLVRN 2700
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 HDGMCVRN 12
H GM VRN
Sbjct: 2692 HGGMLVRN 2699
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I80A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 10 VRNWE 14
+RNWE
Sbjct: 553 IRNWE 557
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 548 IRNWE 552
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 10 VRNWE 14
+RNWE
Sbjct: 546 IRNWE 550
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I01A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 218 IRNWE 222
>sp|PB2_I01A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 218 IRNWE 222
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 10 VRNWE 14
+RNWE
Sbjct: 547 IRNWE 551
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 10 VRNWE 14
+RNWE
Sbjct: 554 IRNWE 558
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 9 CVRNWEC 15
C RN EC
Sbjct: 81 CSRNIEC 87
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 9 CVRNWEC 15
C RN EC
Sbjct: 81 CSRNIEC 87
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 WHDGMCVR 11
+H G C+R
Sbjct: 630 YHAGRCIR 637
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 WHDG 7
WHDG
Sbjct: 163 WHDG 166
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 WHDG 7
WHDG
Sbjct: 163 WHDG 166
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 WHDG 7
WHDG
Sbjct: 163 WHDG 166
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 5 HDGMCVRNW 13
HD VR+W
Sbjct: 1119 HDNHLVRSW 1127
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 4 WHDGMCVR 11
+HD C+R
Sbjct: 221 FHDAKCMR 228
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 9 CVRNWE 14
CV NW+
Sbjct: 436 CVDNWK 441
Query: 3 FWHDGM 8
FWH G+
Sbjct: 1542 FWHCGI 1547
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 9 CVRNWE 14
CV NW+
Sbjct: 436 CVDNWK 441
Query: 3 FWHDGM 8
FWH G+
Sbjct: 1542 FWHCGI 1547
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 9 CVRNWE 14
CV NW+
Sbjct: 436 CVDNWK 441
Query: 3 FWHDGM 8
FWH G+
Sbjct: 1542 FWHCGI 1547
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 VDFWHDGMCVRNWEC 15
+D+W+D N EC
Sbjct: 408 IDYWND-----NSEC 417
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 VDFWHDGMCVRNWEC 15
+D+W+D N EC
Sbjct: 408 IDYWND-----NSEC 417
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FWHDGMC 9
FW+ G C
Sbjct: 75 FWYHGNC 81
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 FWHDGMCVRN 12
+ H G+C +N
Sbjct: 193 YVHYGLCTKN 202
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 7 GMCVRN 12
G CVRN
Sbjct: 504 GSCVRN 509
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 HDGMCV 10
HD MC+
Sbjct: 4365 HDEMCI 4370
>sp|PG190_VACCA|PROTEIN OPG190|Vaccinia virus (strain Ankara) (VACV)
Query: 4 WHDGMCVRNWEC 15
W+D + N EC
Sbjct: 119 WNDTVTCPNAEC 130
>sp|PG190_VACCC|PROTEIN OPG190|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 WHDGMCVRNWEC 15
W+D + N EC
Sbjct: 119 WNDTVTCPNAEC 130
>sp|PG190_VACC0|PROTEIN OPG190|Vaccinia virus (strain LC16m0) (VACV)
Query: 4 WHDGMCVRNWEC 15
W+D + N EC
Sbjct: 119 WNDTVTCPNAEC 130
>sp|PG190_VACCL|PROTEIN OPG190|Vaccinia virus (strain Lister) (VACV)
Query: 4 WHDGMCVRNWEC 15
W+D + N EC
Sbjct: 119 WNDTVTCPNAEC 130
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 4 WHDGMCVRNWEC 15
W+D + N EC
Sbjct: 119 WNDTVTCPNAEC 130
>sp|PG190_VACCT|PROTEIN OPG190|Vaccinia virus (strain Tian Tan)
Query: 4 WHDGMCVRNWEC 15
W+D + N EC
Sbjct: 119 WNDTVTCPNAEC 130
92|SequenceR|465|456|VDFWHDGMCV
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4353 FWRDGSC 4359
Query: 2 DFWHDGMCV 10
D + DG+C+
Sbjct: 6269 DSFKDGLCM 6277
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4353 FWRDGSC 4359
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4391 FWRDGSC 4397
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4411 FWRDGSC 4417
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4441 FWRDGSC 4447
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 VDFWHDG 7
+D+W DG
Sbjct: 410 IDYWDDG 416
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4391 FWRDGSC 4397
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4411 FWRDGSC 4417
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 FWHDGMC 9
FW DG C
Sbjct: 4441 FWRDGSC 4447
>sp|VCYCL_HHV8P|VIRAL cyclin homolog|Human herpesvirus 8 type P
Query: 1 VDFWH 5
+DFWH
Sbjct: 169 LDFWH 173
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 WHDGMC 9
W DG+C
Sbjct: 844 WEDGIC 849
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 WHDGMC 9
W DG+C
Sbjct: 844 WEDGIC 849
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 VDFWHD 6
+D+W+D
Sbjct: 408 IDYWND 413
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 VDFWHD 6
+D+W+D
Sbjct: 408 IDYWND 413
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 WHDG 7
WHDG
Sbjct: 163 WHDG 166
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 WHDG 7
WHDG
Sbjct: 163 WHDG 166
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 WHDG 7
WHDG
Sbjct: 163 WHDG 166
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FWHDGMC 9
FW+ G C
Sbjct: 75 FWYHGNC 81
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 353 VDYWDD 358
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 353 VDYWDD 358
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
VD+W D
Sbjct: 353 VDYWDD 358
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHD 6
VD+W D
Sbjct: 352 VDYWDD 357
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 FWHDGM 8
FWH G+
Sbjct: 1542 FWHCGI 1547
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 FWHDGM 8
FWH G+
Sbjct: 1542 FWHCGI 1547
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 FWHDGM 8
FWH G+
Sbjct: 1542 FWHCGI 1547
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 VDFWHDG 7
V+ W+DG
Sbjct: 122 VEVWYDG 128
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 3 FWHDGM 8
+W DG+
Sbjct: 436 YWRDGL 441
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 VDFWHD 6
VDFW +
Sbjct: 143 VDFWDE 148
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHD 6
+D+W D
Sbjct: 353 IDYWDD 358
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHD 6
+D+W D
Sbjct: 353 IDYWDD 358
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
+D+W D
Sbjct: 352 IDYWDD 357
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 VDFWHD 6
+D+W D
Sbjct: 352 IDYWDD 357
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 VDFWHD 6
+D+W D
Sbjct: 362 IDYWDD 367
>sp|VP4_ROTH7|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 1 VDFWHD 6
+D+W D
Sbjct: 352 IDYWDD 357
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 VDFWHD 6
+D+W D
Sbjct: 352 IDYWDD 357
>sp|VP4_ROT41|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 VDFWHD 6
+D+W D
Sbjct: 353 IDYWDD 358
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 5 HDGMCV 10
HD MC+
Sbjct: 4365 HDEMCI 4370
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 WHDGMC 9
W +G+C
Sbjct: 840 WEEGIC 845
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 825 WEEGVC 830
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 825 WEEGVC 830
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 824 WEEGVC 829
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 823 WENGVC 828
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 823 WENGVC 828
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 823 WENGVC 828
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 823 WENGVC 828
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 VDFWHDGMC 9
+D W + MC
Sbjct: 247 IDRWCNPMC 255
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 VDFWHDGMC 9
+D W + MC
Sbjct: 247 IDRWCNPMC 255
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 VDFWHDGMC 9
+D W + MC
Sbjct: 247 IDRWCNPMC 255
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 VDFWHDGMC 9
+D W + MC
Sbjct: 247 IDRWCNPMC 255
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VDFWHDGMC 9
+D W + MC
Sbjct: 247 IDRWCNPMC 255
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VDFWHDGMC 9
+D W + MC
Sbjct: 247 IDRWCNPMC 255
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 WHDGMC 9
W +G+C
Sbjct: 823 WENGVC 828
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 2 DFWHDGMC 9
DF+ G C
Sbjct: 432 DFYRQGCC 439
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 VDFWHDG 7
V+ W+DG
Sbjct: 122 VEVWYDG 128
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 VDFWHDGM 8
+DF H G+
Sbjct: 1059 IDFEHTGL 1066
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 HDGMCV 10
H+G CV
Sbjct: 232 HNGTCV 237
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 VDFWHDGM 8
+DF H G+
Sbjct: 1061 IDFEHPGL 1068
>sp|VPX_HV2RO|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 FWHD 6
+WHD
Sbjct: 55 YWHD 58
>sp|VPX_HV2KR|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 3 FWHDGM 8
+WHD +
Sbjct: 55 YWHDDL 60
THE END