PRKN_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SSNFRVFVIM

>sp|CDVC_SULAC|CELL division protein C|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SSNFRVFVI 9
S NF+V+VI
Sbjct: 242 SENFKVYVI 250


>sp|HISX_ARCFU|HISTIDINOL dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SNFRVFVI 9
SNF VFV+
Sbjct: 277 SNFAVFVV 284


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM

Query: 2 SNFRVFV 8
SNF VFV
Sbjct: 44 SNFEVFV 50




2|SequenceR|15|6|VPFGHSSNFR

>sp|AMTAB_PYRAB|PROBABLE threonylcarbamoyladenosine tRNA methylthiotransferase|Pyrococcus

Query: 1 VPFGHSSNFR 10
+PFG+S FR
Sbjct: 398 LPFGNSGEFR 407


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PFGHSSNFR 10
PFGH+ +++
Sbjct: 215 PFGHARDYK 223


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 1 VPFGHSSNF 9
+PFG+ NF
Sbjct: 198 IPFGYPKNF 206


>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPFGHSS 7
+PFGHS+
Sbjct: 165 LPFGHSA 171


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VPFGHSSNFR 10
+P+G S +FR
Sbjct: 312 LPYGFSRHFR 321


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 3 FGHSSNFR 10
GH+S FR
Sbjct: 298 LGHTSTFR 305


>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 3 FGHSSNFR 10
GH+S FR
Sbjct: 298 LGHTSTFR 305


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 4 GHSSNFR 10
GHSSN +
Sbjct: 324 GHSSNLK 330




3|SequenceR|20|11|DSDVEVPFGH

>sp|Y1599_METJA|UNCHARACTERIZED protein MJ1599|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EVPFGH 10
E+PFGH
Sbjct: 164 ELPFGH 169


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DSDVEVPFG 9
DSDVE FG
Sbjct: 256 DSDVEKEFG 264


>sp|RL18_PYRCJ|LARGE ribosomal subunit protein uL18|Pyrobaculum calidifontis (strain DSM

Query: 1 DSDVEVPFG 9
D+ VEVP G
Sbjct: 125 DAGVEVPHG 133


>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM 6242

Query: 2 SDVEVPF 8
+D+EVPF
Sbjct: 115 TDLEVPF 121


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSDVEVPFG 9
D+DVE FG
Sbjct: 296 DADVEKEFG 304


>sp|PFDA_THEVO|PREFOLDIN subunit alpha|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DSDVEVPFG 9
DSD+ VP G
Sbjct: 68 DSDLIVPIG 76


>sp|RS13_AERPE|SMALL ribosomal subunit protein uS13|Aeropyrum pernix (strain ATCC

Query: 1 DSDVEVPFG 9
D D+++P+G
Sbjct: 19 DGDLKLPYG 27


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VEVPFG 9
VEVPFG
Sbjct: 114 VEVPFG 119


>sp|PGK2_METVS|2-PHOSPHOGLYCERATE kinase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DSDVEVPF 8
D D E+PF
Sbjct: 14 DKDYEMPF 21


>sp|ASST_METJA|L-ASPARTATE semialdehyde sulfurtransferase|Methanocaldococcus jannaschii

Query: 1 DSDVEVP 7
D D+EVP
Sbjct: 291 DEDIEVP 297


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 VEVPFG 9
VEVPFG
Sbjct: 173 VEVPFG 178


>sp|RL18_THEAC|LARGE ribosomal subunit protein uL18|Thermoplasma acidophilum (strain

Query: 1 DSDVEVPFG 9
D+ +EVP G
Sbjct: 120 DAGIEVPHG 128


>sp|Y1676_SACI1|UPF0201 protein YN1551_1676|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 DSDVEVPFG 9
DSD E P G
Sbjct: 100 DSDKESPLG 108


>sp|Y1276_SACI2|UPF0201 protein LS215_1276|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 DSDVEVPFG 9
DSD E P G
Sbjct: 100 DSDKESPLG 108


>sp|Y1175_SACI7|UPF0201 protein YG5714_1175|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 DSDVEVPFG 9
DSD E P G
Sbjct: 100 DSDKESPLG 108


>sp|Y1042_SACS2|UPF0201 protein SSO1042|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DSDVEVPFG 9
DSD E P G
Sbjct: 100 DSDKESPLG 108


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus

Query: 3 DVEVPFG 9
D++ PFG
Sbjct: 12 DIDTPFG 18


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DVEVPFGH 10
D+ VPF H
Sbjct: 24 DMNVPFDH 31


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DSDVEVPFG 9
D DVE FG
Sbjct: 253 DEDVEPEFG 261


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DSDVEVPFG 9
D DVE FG
Sbjct: 255 DEDVEKEFG 263


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 4 VEVPFGH 10
+E+P GH
Sbjct: 531 IEIPAGH 537




4|SequenceR|25|16|QFISTDSDVE

>sp|TOP1_METJA|DNA topoisomerase 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FISTDSDVE 10
+I+TD D+E
Sbjct: 107 YIATDWDIE 115


>sp|AROK_METTP|SHIKIMATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 QFISTDSDVE 10
QF S D DVE
Sbjct: 171 QFFSRDVDVE 180


>sp|UVRC_METMP|UVRABC system protein C|Methanococcus maripaludis (strain DSM 14266

Query: 1 QFISTDSDVE 10
+FI TD++VE
Sbjct: 60 EFIVTDNEVE 69


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain

Query: 3 ISTDSDVE 10
+STDSD E
Sbjct: 1 MSTDSDAE 8


>sp|LONB_PYRAB|ARCHAEAL Lon protease|Pyrococcus abyssi (strain GE5 /

Query: 1 QFISTDSDVE 10
QFI T DVE
Sbjct: 523 QFIETWEDVE 532


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FISTDSDVE 10
F++TD D+E
Sbjct: 491 FVATDDDIE 499


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FISTDSDVE 10
FI+TD D E
Sbjct: 677 FIATDIDTE 685


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 TDSDVE 10
TDSDVE
Sbjct: 264 TDSDVE 269




5|SequenceR|30|21|VVEKLQFIST

>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 1 VVEKLQFI 8
++EKL+F+
Sbjct: 338 IIEKLEFL 345




6|SequenceR|35|26|GQRKAVVEKL

>sp|PIMT_METJA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QRKAVVEKL 10
Q+KAV+EKL
Sbjct: 6 QKKAVIEKL 14


>sp|RAD50_METKA|DNA double-strand break repair Rad50|Methanopyrus kandleri (strain

Query: 1 GQRKAVVE 8
G+R+AVVE
Sbjct: 61 GERRAVVE 68


>sp|Y1309_STAMF|PROTEIN Smar_1309|Staphylothermus marinus (strain ATCC 43588

Query: 3 RKAVVEKL 10
RKAV EKL
Sbjct: 25 RKAVEEKL 32


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 1 GQRKAVVEKL 10
G RKA+V K+
Sbjct: 381 GDRKAIVAKV 390


>sp|RS24_METTP|SMALL ribosomal subunit protein eS24|Methanothrix thermoacetophila

Query: 3 RKAVVEKL 10
RK+VVE+L
Sbjct: 33 RKSVVERL 40


>sp|RIFK_PYRAE|RIBOFLAVIN kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GQRKAVVEKL 10
G R+A+ EKL
Sbjct: 103 GYRRAIEEKL 112




7|SequenceR|40|31|QDAPVGQRKA

>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 1 QDAPVGQRK 9
+D PVG+R+
Sbjct: 139 EDGPVGERR 147


>sp|SYS_HALSA|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 QDAPVGQRKA 10
+DAPVG +A
Sbjct: 111 EDAPVGDSEA 120


>sp|SYS_HALS3|SERINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 QDAPVGQRKA 10
+DAPVG +A
Sbjct: 111 EDAPVGDSEA 120


>sp|Y2010_ARCFU|UNCHARACTERIZED protein AF_2010|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QDAPVGQRK 9
+D P+ QRK
Sbjct: 186 EDIPLSQRK 194




8|SequenceR|45|36|FIVRLQDAPV

>sp|RADA_HALVD|DNA repair and recombination protein|Haloferax volcanii (strain ATCC

Query: 2 IVRLQDAP 9
IVRL DAP
Sbjct: 317 IVRLVDAP 324


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain DSM

Query: 2 IVRLQDAP 9
IVRL DAP
Sbjct: 317 IVRLVDAP 324


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 IVRLQDAPV 10
++R DAPV
Sbjct: 356 VIRTTDAPV 364




9|SequenceR|50|41|LEKGAFIVRL

>sp|Y745_PYRAE|PROTEIN PAE0745|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LEKGAFIVRL 10
LE+G F+VRL
Sbjct: 7 LEEGTFLVRL 16


>sp|Y360_CALMQ|PROTEIN Cmaq_0360|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 LEKGAFIVRL 10
LE+G F+VRL
Sbjct: 7 LEQGKFLVRL 16


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 1 LEKGAFIVRL 10
LE+G F+VRL
Sbjct: 7 LEEGEFLVRL 16


>sp|RQCH_METJA|ARCHAEAL Rqc2 homolog aRqcH|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEKGAFIVR 9
L++GAF++R
Sbjct: 577 LKRGAFVIR 585


>sp|TRM56_METAR|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanocella arvoryzae

Query: 2 EKGAFIVRL 10
EKG F+V L
Sbjct: 76 EKGGFVVHL 84


>sp|FLAB2_AERPE|PROBABLE flagellin 2|Aeropyrum pernix (strain ATCC 700893

Query: 2 EKGAFIVRL 10
EKG I+RL
Sbjct: 173 EKGLLIIRL 181


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LEKGAFIVR 9
L KGAFI++
Sbjct: 201 LAKGAFIIK 209


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 KGAFIVRL 10
KGAFI++L
Sbjct: 312 KGAFIMKL 319


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EKGAFIVRL 10
E+G +IVRL
Sbjct: 143 EEGKYIVRL 151


>sp|FDHB2_METMP|F420-DEPENDENT formate dehydrogenase 2 subunit|Methanococcus maripaludis (strain

Query: 1 LEKGAFIVRL 10
++KG FI+ L
Sbjct: 151 IDKGKFIIEL 160


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EKGAFI 7
EKGAFI
Sbjct: 93 EKGAFI 98


>sp|FDHB_METJA|F420-DEPENDENT formate dehydrogenase subunit beta|Methanocaldococcus jannaschii

Query: 1 LEKGAFIVRL 10
++KG FI+ L
Sbjct: 151 IDKGKFIIEL 160


>sp|Y748_THEPD|PROTEIN Tpen_0748|Thermofilum pendens (strain DSM 2475

Query: 2 EKGAFIVRL 10
E+GA +VRL
Sbjct: 7 EEGALLVRL 15


>sp|KUP_METAC|PROBABLE potassium transport system protein|Methanosarcina acetivorans

Query: 1 LEKGAFIVR 9
L +GAFI+R
Sbjct: 257 LGQGAFIIR 265




10|SequenceR|55|46|TWDNRLEKGA

>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TWDNRLEK 8
TWD RLE+
Sbjct: 163 TWDGRLER 170


>sp|GLYA_AERPE|SERINE hydroxymethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 WDNRLEKGA 10
W N LE+GA
Sbjct: 216 WPNPLERGA 224


>sp|Y476_AERPE|UPF0215 protein APE_0476.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 TWDNRL 6
+WDNRL
Sbjct: 24 SWDNRL 29


>sp|GLYA_SULTO|SERINE hydroxymethyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WDNRLEKGA 10
W N LE+GA
Sbjct: 211 WHNPLEEGA 219


>sp|GLYA_SULAC|SERINE hydroxymethyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 WDNRLEKGA 10
W N LE+GA
Sbjct: 211 WHNPLEEGA 219


>sp|GLYA_STAMF|SERINE hydroxymethyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 WDNRLEKGA 10
W+N L++GA
Sbjct: 215 WENPLKQGA 223


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WDNRLE 7
WDNRL+
Sbjct: 586 WDNRLK 591


>sp|IF6_PYRFU|TRANSLATION initiation factor 6|Pyrococcus furiosus (strain ATCC 43587

Query: 2 WDNRLEK 8
WD+ LEK
Sbjct: 76 WDSELEK 82


>sp|Y961_METJA|MCM-LIKE protein MJ0961|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WDNRLEKG 9
WD +EKG
Sbjct: 194 WDKLVEKG 201


>sp|GLYA_METS5|SERINE hydroxymethyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WDNRLEKGA 10
W N L++GA
Sbjct: 210 WSNPLDEGA 218


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 WDNRLEKG 9
W+ LEKG
Sbjct: 375 WEKMLEKG 382


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 1 TWDNRLEKGA 10
TW+N+L A
Sbjct: 161 TWENQLSPSA 170


>sp|RPO6_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo6|Sulfurisphaera tokodaii (strain DSM

Query: 1 TWDNRLEK 8
+W NRL K
Sbjct: 10 SWKNRLTK 17


>sp|DNLI_METMP|DNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 WDNRLEK 8
WD+ LEK
Sbjct: 372 WDSELEK 378


>sp|DNLI_METM6|DNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 WDNRLEK 8
WD+ LEK
Sbjct: 372 WDSELEK 378


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TWDNRLEKGA 10
TW+N+L A
Sbjct: 161 TWENQLSPSA 170


>sp|COFH_METBU|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanococcoides burtonii (strain DSM

Query: 1 TWDNRLE 7
TW++R+E
Sbjct: 214 TWEDRIE 220


>sp|ENGB_METMP|PROBABLE GTP-binding protein EngB|Methanococcus maripaludis (strain DSM

Query: 2 WDNRLEK 8
WDN L+K
Sbjct: 176 WDNHLDK 182


>sp|CBIL_METJA|PROBABLE cobalt-precorrin-2 C(20)-methyltransferase|Methanocaldococcus

Query: 2 WDNRLEK 8
W+N LEK
Sbjct: 79 WENALEK 85


>sp|Y1188_METJA|UNCHARACTERIZED protein MJ1188|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WDNRLE 7
WDNR +
Sbjct: 41 WDNRFD 46


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 WDNRLEK 8
WD LEK
Sbjct: 372 WDTELEK 378


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 2 WDNRLEKGA 10
W+ LEKG
Sbjct: 166 WNAELEKGG 174


>sp|SPEH_THEON|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Thermococcus onnurineus (strain NA1)

Query: 1 TWDNRLEK 8
TW+ +LE+
Sbjct: 127 TWEEKLER 134


>sp|CP119_SULTO|CYTOCHROME P450 119|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 TWDNRLEKGA 10
+WD EKGA
Sbjct: 231 SWDYVREKGA 240


>sp|SPEH_PYRHO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TWDNRLEK 8
TW+ RL++
Sbjct: 127 TWEERLDR 134


>sp|GPMI_HALWD|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TWDNRLEKGA 10
T+D +EKGA
Sbjct: 29 TFDRLIEKGA 38


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 2 WDNRLEKG 9
WD +E+G
Sbjct: 181 WDEHVERG 188




11|SequenceR|60|51|DCNQVTWDNR

>sp|CAPPA_CALMQ|PHOSPHOENOLPYRUVATE carboxylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 DCNQVTWD 8
DC + WD
Sbjct: 44 DCQETMWD 51


>sp|Y476_AERPE|UPF0215 protein APE_0476.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 VTWDNR 10
++WDNR
Sbjct: 23 ISWDNR 28


>sp|YTF2_SACSH|TFIIB-TYPE zinc finger protein|Saccharolobus shibatae (strain ATCC 51178

Query: 3 NQVTWDNR 10
N++ WDN+
Sbjct: 9 NEIVWDNK 16


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 5 VTWDNR 10
V WDNR
Sbjct: 584 VNWDNR 589


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DCNQVTWD 8
+C Q+ W+
Sbjct: 336 ECKQIAWE 343


>sp|Y1571_AERPE|UNCHARACTERIZED protein APE_1571.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DCNQVTW 7
D NQV W
Sbjct: 404 DVNQVIW 410


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain

Query: 1 DCNQVTWD 8
DC + WD
Sbjct: 18 DCRSIDWD 25


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain

Query: 1 DCNQVTWD 8
DC V WD
Sbjct: 16 DCYTVDWD 23


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 DCNQVTWDNR 10
D +VT+D R
Sbjct: 965 DATEVTYDGR 974


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VTWDNR 10
+TWD R
Sbjct: 162 ITWDGR 167




12|SequenceR|65|56|SQQDLDCNQV

>sp|TRUA_THEAC|TRNA pseudouridine synthase A|Thermoplasma acidophilum (strain ATCC

Query: 2 QQDLDC 7
+QDLDC
Sbjct: 111 RQDLDC 116


>sp|NADM_METTH|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanothermobacter thermautotrophicus

Query: 3 QDLDCN 8
QD++CN
Sbjct: 76 QDIECN 81




13|SequenceR|70|61|VIHVISQQDL

>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 2 IHVISQQDL 10
IHV++ +DL
Sbjct: 345 IHVVTPEDL 353


>sp|FPOL_METMA|F(420)H(2) dehydrogenase subunit L|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VIHVISQQDL 10
VIH + QD+
Sbjct: 376 VIHAVGTQDM 385


>sp|ECFA1_METHJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanospirillum hungatei

Query: 2 IHVISQQDL 10
+H+I QDL
Sbjct: 1 MHIIETQDL 9




14|SequenceR|75|66|RWPRQVIHVI

>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RWPRQVI 7
+WPRQ++
Sbjct: 680 KWPRQIV 686


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 RWPRQVI 7
+WPRQ++
Sbjct: 621 KWPRQIV 627


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 RWPRQVI 7
+WPRQ++
Sbjct: 621 KWPRQIV 627


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RWPRQVI 7
+WPRQ++
Sbjct: 621 KWPRQIV 627


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RWPRQVI 7
+WPRQ++
Sbjct: 621 KWPRQIV 627


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RWPRQVI 7
+WPRQ++
Sbjct: 621 KWPRQIV 627


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus kandleri

Query: 3 PRQVIHVI 10
PR V+HV+
Sbjct: 101 PRSVLHVL 108


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PRQVIHVI 10
PRQ+ H+I
Sbjct: 452 PRQMKHII 459


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 1 RWPRQVIH 8
R PR+V+H
Sbjct: 352 RTPRRVLH 359


>sp|TRM56_HALSA|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 2 WPRQVIHV 9
WP V+H+
Sbjct: 77 WPGVVVHL 84


>sp|TRM56_HALS3|TRNA (cytidine(56)-2'-O)-methyltransferase|Halobacterium salinarum

Query: 2 WPRQVIHV 9
WP V+H+
Sbjct: 77 WPGVVVHL 84




15|SequenceR|80|71|MEQGKRWPRQ

>sp|DP2L_METTP|DNA polymerase II large subunit|Methanothrix thermoacetophila (strain

Query: 2 EQGKRWPRQ 10
E G+RW R+
Sbjct: 533 ETGRRWRRE 541


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 MEQGKRWP 8
+ QGK WP
Sbjct: 44 ITQGKLWP 51


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 MEQGKRWPR 9
+E+GK W +
Sbjct: 257 LEEGKSWEK 265


>sp|DNLI_ACIAM|DNA ligase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 3 QGKRWP 8
QGK WP
Sbjct: 46 QGKLWP 51


>sp|UPPS_THEVO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Thermoplasma

Query: 1 MEQGKRWPR 9
ME+ K++PR
Sbjct: 20 MEEVKKYPR 28


>sp|BRIX_THEKO|PROBABLE Brix domain-containing ribosomal biogenesis|Thermococcus

Query: 1 MEQGKRW 7
ME G+RW
Sbjct: 190 MEDGRRW 196


>sp|BRIX_PYRHO|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus horikoshii

Query: 1 MEQGKRW 7
ME G+RW
Sbjct: 190 MEDGRRW 196


>sp|BRIX_PYRAB|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus abyssi

Query: 1 MEQGKRW 7
ME G+RW
Sbjct: 190 MEDGRRW 196


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 1 MEQGKRWPRQ 10
M+QG WP +
Sbjct: 389 MKQGAEWPDK 398


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 MEQGKRWPRQ 10
M G+ WPR+
Sbjct: 380 MRYGEEWPRK 389


>sp|BRIX_PYRFU|PROBABLE Brix domain-containing ribosomal biogenesis|Pyrococcus furiosus

Query: 1 MEQGKRW 7
ME G+RW
Sbjct: 190 MEDGRRW 196


>sp|GATE_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Haloarcula marismortui (strain ATCC

Query: 4 GKRWP 8
G+RWP
Sbjct: 473 GQRWP 477


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 3 QGKRWP 8
+GK+WP
Sbjct: 580 EGKQWP 585


>sp|PDXS_PYRAR|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Pyrobaculum arsenaticum

Query: 2 EQGKRWPR 9
E+G WPR
Sbjct: 29 ERGFTWPR 36


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 1 MEQGKRWP 8
ME+G R+P
Sbjct: 63 MEEGGRYP 70


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 QGKRWP 8
QGK WP
Sbjct: 49 QGKLWP 54


>sp|DNLI_HYPBU|DNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 QGKRWP 8
QGK WP
Sbjct: 48 QGKLWP 53


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM

Query: 1 MEQGKRWPRQ 10
MEQ K W Q
Sbjct: 84 MEQPKVWQNQ 93


>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 2 EQGKRWP 8
E+G+ WP
Sbjct: 99 ERGEAWP 105


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 4 GKRWP 8
GK+WP
Sbjct: 581 GKQWP 585




16|SequenceR|85|76|GGTANMEQGK

>sp|CAS1_PYRHO|CRISPR-ASSOCIATED endonuclease Cas1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GGTANMEQ 8
GGT NME+
Sbjct: 111 GGTKNMER 118


>sp|CBIT_METM7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GGTANMEQ 8
GGT N+EQ
Sbjct: 104 GGTQNIEQ 111


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGTANMEQGK 10
GG N+ QGK
Sbjct: 865 GGKENLAQGK 874


>sp|CBIT_METM5|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GGTANMEQ 8
GGT N+EQ
Sbjct: 104 GGTQNIEQ 111


>sp|CBIT_METM6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GGTANMEQ 8
GGT N+EQ
Sbjct: 104 GGTQNIEQ 111


>sp|CBIT_METMP|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GGTANMEQ 8
GGT N+EQ
Sbjct: 104 GGTQNIEQ 111


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 1 GGTANMEQ 8
GGT ++EQ
Sbjct: 201 GGTGDLEQ 208


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GGTANMEQGK 10
GG N+ QGK
Sbjct: 865 GGKDNLAQGK 874


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GGTANMEQGK 10
GG N+ QGK
Sbjct: 865 GGKDNLAQGK 874


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 GGTANMEQGK 10
GG N+ QGK
Sbjct: 865 GGKDNLAQGK 874


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 GGTANMEQGK 10
GG N+ QGK
Sbjct: 865 GGKDNLAQGK 874


>sp|EF1B_SACS2|ELONGATION factor 1-beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|EF1B_SACI7|ELONGATION factor 1-beta|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|EF1B_SACI6|ELONGATION factor 1-beta|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|EF1B_SACI4|ELONGATION factor 1-beta|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|EF1B_SACI3|ELONGATION factor 1-beta|Saccharolobus islandicus (strain M.16.27)

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|EF1B_SACI2|ELONGATION factor 1-beta|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|EF1B_SACI1|ELONGATION factor 1-beta|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GGTANMEQ 8
GGT N+E+
Sbjct: 63 GGTDNLEE 70


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GTANMEQGK 10
GTA + +GK
Sbjct: 240 GTATLREGK 248




17|SequenceR|90|81|NRPDDGGTAN

>sp|COBS_METTH|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 NRPDDGGTA 9
+RP DGGT
Sbjct: 156 SRPLDGGTG 164


>sp|MPTA_KORCO|GTP cyclohydrolase MptA|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RPDDGG 7
RPD+GG
Sbjct: 205 RPDEGG 210


>sp|KPRS_THEVO|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PDDGGTA 9
PDDGG A
Sbjct: 160 PDDGGLA 166


>sp|KPRS_THEAC|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PDDGG 7
PDDGG
Sbjct: 160 PDDGG 164


>sp|RL2_METTH|LARGE ribosomal subunit protein uL2|Methanothermobacter

Query: 1 NRPDDGG 7
NRP DGG
Sbjct: 114 NRPGDGG 120


>sp|SURE_HALMA|5'-NUCLEOTIDASE SurE|Haloarcula marismortui (strain ATCC 43049

Query: 2 RPDDGGTA 9
PDDGG A
Sbjct: 260 EPDDGGEA 267


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PDDGGTAN 10
P DGGTA+
Sbjct: 336 PADGGTAD 343


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PDDGGTAN 10
P DGGTA+
Sbjct: 336 PADGGTAD 343


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 RPDDGGT 8
+P DGGT
Sbjct: 201 QPTDGGT 207




18|SequenceR|95|86|CGGAANRPDD

>sp|SAV_SULAC|PROTEIN SAV|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 GAANRPD 9
GA NRPD
Sbjct: 353 GATNRPD 359


>sp|DNLI_SULZI|DNA ligase|Sulfophobococcus zilligii

Query: 2 GGAANRP 8
GG ANRP
Sbjct: 194 GGVANRP 200


>sp|FLPA_METMP|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 3 GAANRPDD 10
G ANRP D
Sbjct: 129 GDANRPQD 136


>sp|FLPA_METM7|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 3 GAANRPDD 10
G ANRP D
Sbjct: 129 GDANRPQD 136


>sp|FLPA_METM6|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 3 GAANRPDD 10
G ANRP D
Sbjct: 129 GDANRPQD 136


>sp|FLPA_METM5|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus maripaludis (strain

Query: 3 GAANRPDD 10
G ANRP D
Sbjct: 129 GDANRPQD 136


>sp|HPS_METBF|3-HEXULOSE-6-PHOSPHATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CGGAANRPDD 10
CGG A +P D
Sbjct: 348 CGGQAVKPGD 357


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 CGGAANRP 8
CG A +RP
Sbjct: 1133 CGQAGSRP 1140


>sp|UVRA_METTH|UVRABC system protein A|Methanothermobacter thermautotrophicus (strain

Query: 1 CGGAANRPD 9
CGG+ RP+
Sbjct: 419 CGGSRLRPE 427


>sp|LYSW_SULAC|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 CGGAANRPDD 10
CG N PDD
Sbjct: 9 CGNDVNVPDD 18


>sp|LYSW_SULTO|ALPHA-AMINOADIPATE/GLUTAMATE carrier protein LysW|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CGGAANRPDD 10
C G N PDD
Sbjct: 9 CNGDVNVPDD 18


>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 CGGAANRPD 9
C G ANR D
Sbjct: 325 CVGIANRGD 333


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 CGGAANRPD 9
C G ANR D
Sbjct: 325 CVGIANRGD 333


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain ATCC

Query: 2 GGAANRPDD 10
GG +RPD+
Sbjct: 358 GGEIHRPDE 366




19|SequenceR|100|91|QPERECGGAA

>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QPERECGGA 9
QP+R C GA
Sbjct: 482 QPKRGCAGA 490


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 2 PERECGGA 9
PE+E GGA
Sbjct: 74 PEKEWGGA 81


>sp|RS17_METST|SMALL ribosomal subunit protein uS17|Methanosphaera stadtmanae (strain

Query: 1 QPEREC 6
QPE+EC
Sbjct: 8 QPEKEC 13


>sp|SODF_METTH|SUPEROXIDE dismutase [Fe]|Methanothermobacter thermautotrophicus (strain

Query: 2 PERECGG 8
P ECGG
Sbjct: 90 PADECGG 96


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 2 PERECGG 8
P ECGG
Sbjct: 87 PADECGG 93


>sp|HIS8_METAC|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PERECGG 8
P R CGG
Sbjct: 131 PARACGG 137


>sp|HIS8_METBF|HISTIDINOL-PHOSPHATE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PERECGG 8
P R CGG
Sbjct: 130 PARACGG 136


>sp|NPD_SULTO|NAD-DEPENDENT protein deacetylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PERECGG 8
P+ ECGG
Sbjct: 147 PKCECGG 153


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 4 RECGG 8
RECGG
Sbjct: 2225 RECGG 2229


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PERECGG 8
P ECGG
Sbjct: 151 PRCECGG 157


>sp|RS17_ARCFU|SMALL ribosomal subunit protein uS17|Archaeoglobus fulgidus (strain

Query: 2 PEREC 6
PEREC
Sbjct: 11 PEREC 15


>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 4 RECGG 8
RECGG
Sbjct: 1306 RECGG 1310




20|SequenceR|105|96|VRTLSQPERE

>sp|DHE2_SACS2|GLUTAMATE dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VRTLSQPER 9
+ TLSQPER
Sbjct: 32 LETLSQPER 40


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 VRTLSQPER 9
VRTL PER
Sbjct: 373 VRTLGNPER 381


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 1 VRTLSQPER 9
VRTL PER
Sbjct: 161 VRTLKSPER 169


>sp|DHE4_SACSH|NADP-SPECIFIC glutamate dehydrogenase|Saccharolobus shibatae (strain ATCC 51178

Query: 1 VRTLSQPER 9
+ LSQPER
Sbjct: 35 LEALSQPER 43


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 1 VRTLSQPERE 10
VRTL++ ERE
Sbjct: 294 VRTLNENERE 303


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VRTLSQPER 9
V+T+ +PER
Sbjct: 373 VKTVGKPER 381


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VRTLSQPER 9
V+T+ +PER
Sbjct: 373 VKTVGKPER 381


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 VRTLSQPER 9
V+T+ +PER
Sbjct: 373 VKTVGKPER 381


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 VRTLSQPER 9
V+T+ PER
Sbjct: 373 VKTIGNPER 381


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VRTLSQPER 9
V+T+ +PER
Sbjct: 373 VKTVGKPER 381


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VRTLSQPER 9
V+T+ +PER
Sbjct: 373 VKTVGKPER 381


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VRTLSQPER 9
V+T+ +PER
Sbjct: 373 VKTVGKPER 381


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 VRTLSQPER 9
V+TL +P+R
Sbjct: 371 VKTLGRPDR 379


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 2 RTLSQPER 9
RTL+ PER
Sbjct: 345 RTLTVPER 352




21|SequenceR|110|101|SSSLDVRTLS

>sp|NADA_SACS2|QUINOLINATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SSSLDVRTL 9
S SLDV+TL
Sbjct: 90 SDSLDVKTL 98




22|SequenceR|115|106|DGPLVSSSLD

>sp|SYDND_METBU|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGPLVSSSLD 10
D PL+S S D
Sbjct: 350 DNPLISKSFD 359


>sp|SYL_AERPE|LEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GPLVSSSL 9
GP+VSS+L
Sbjct: 81 GPIVSSAL 88


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 DGPLVS 6
DGPLVS
Sbjct: 539 DGPLVS 544


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 GPLVSSSLD 10
GP++S S+D
Sbjct: 169 GPIISVSID 177


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DGPLVS 6
DGPLVS
Sbjct: 532 DGPLVS 537


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 DGPLVS 6
DGPLVS
Sbjct: 539 DGPLVS 544


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGPLVS 6
DGPLVS
Sbjct: 535 DGPLVS 540


>sp|DTDA_METB6|D-AMINOACYL-TRNA deacylase|Methanoregula boonei (strain DSM 21154

Query: 2 GPLVSSSLD 10
GPLV SLD
Sbjct: 294 GPLVLVSLD 302




23|SequenceR|120|111|ALGVSDGPLV

>sp|Y905_PICTO|UPF0215 protein PTO0905|Picrophilus torridus (strain ATCC 700027

Query: 2 LGVSDGPLV 10
LG+ DGP +
Sbjct: 8 LGIDDGPFI 16


>sp|SYP_METMJ|PROLINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LGVSDGPLV 10
+ VSDGP V
Sbjct: 454 IAVSDGPCV 462


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ALGVSDGPLV 10
ALGV DG +V
Sbjct: 155 ALGVDDGVVV 164


>sp|FAU1_METKA|PROBABLE ribonuclease FAU-1|Methanopyrus kandleri (strain AV19 /

Query: 1 ALGVSDGPL 9
A VSDGPL
Sbjct: 140 AKSVSDGPL 148


>sp|AMPPA_THEPD|AMP phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 ALGVSDG 7
ALG+SDG
Sbjct: 68 ALGISDG 74


>sp|RNZ_METAC|RIBONUCLEASE Z|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ALGVSDGPL 9
ALGV GPL
Sbjct: 163 ALGVPPGPL 171


>sp|AATI_HALSA|A-TYPE ATP synthase subunit I|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALGVSDGPL 9
ALG++D PL
Sbjct: 452 ALGLADAPL 460


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 1 ALGVSDGPLV 10
ALG DG LV
Sbjct: 356 ALGFGDGALV 365


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 3 GVSDGPL 9
G+SD PL
Sbjct: 344 GISDSPL 350


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGVSDGP 8
LG+ DGP
Sbjct: 165 LGIIDGP 171


>sp|GATD_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermoplasma volcanium (strain ATCC

Query: 3 GVSDGPLV 10
G+SDG +V
Sbjct: 214 GISDGSIV 221


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 2 LGVSDGPLV 10
+ +SDGPL+
Sbjct: 228 VSLSDGPLL 236


>sp|AOR_THEKO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Thermococcus kodakarensis

Query: 2 LGVSDGP 8
LGV++GP
Sbjct: 304 LGVTEGP 310


>sp|ADHS_METM6|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GVSDGPL 9
GVS GPL
Sbjct: 35 GVSSGPL 41


>sp|ADHS_METVS|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GVSDGPL 9
GVS GPL
Sbjct: 35 GVSSGPL 41


>sp|ADHS_METMP|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GVSDGPL 9
GVS GPL
Sbjct: 35 GVSSGPL 41




24|SequenceR|125|116|THLIVALGVS

>sp|GAD_SACS2|D-GLUCONATE/D-GALACTONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 THLIVALG 8
THL VALG
Sbjct: 241 THLRVALG 248


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 2 HLIVALGVS 10
HLI LG+S
Sbjct: 125 HLISELGIS 133


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HLIVALGV 9
H IVA+GV
Sbjct: 18 HRIVAIGV 25


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 1 THLIVALGVS 10
+H+++A+G+S
Sbjct: 1076 SHVLLAMGLS 1085




25|SequenceR|130|121|DKRSDTHLIV

>sp|IDI2_PYRAE|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DKRSDTHL 8
DKR D H+
Sbjct: 4 DKRKDDHI 11




26|SequenceR|135|126|GAPPSDKRSD

>sp|YF9A_METJA|UNCHARACTERIZED protein MJ1597.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PSDKRSD 10
PS KRSD
Sbjct: 50 PSSKRSD 56


Query: 4 PSDKRSD 10
PS KRSD
Sbjct: 73 PSSKRSD 79


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 GAPPSD 6
GAPPS+
Sbjct: 296 GAPPSE 301


>sp|MTMC2_METMA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAPPSDKRSD 10
GAP SDK D
Sbjct: 186 GAPVSDKWID 195


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 1 GAPPSD 6
GAPPS+
Sbjct: 297 GAPPSE 302


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAPPSD 6
GAPPS+
Sbjct: 297 GAPPSE 302


>sp|MTMC1_METMA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GAPPSDKRSD 10
GAP SDK D
Sbjct: 186 GAPVSDKWID 195


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GAPPSD 6
GAPPS+
Sbjct: 297 GAPPSE 302


>sp|MTMC2_METBA|MONOMETHYLAMINE corrinoid protein 2|Methanosarcina barkeri

Query: 1 GAPPSDK 7
GAP SDK
Sbjct: 185 GAPVSDK 191


>sp|MTMC1_METBA|MONOMETHYLAMINE corrinoid protein 1|Methanosarcina barkeri

Query: 1 GAPPSDK 7
GAP SDK
Sbjct: 185 GAPVSDK 191


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 1 GAPPSD 6
GAPPS+
Sbjct: 297 GAPPSE 302


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 1 GAPPSDKRSD 10
G PPS + +D
Sbjct: 21 GKPPSQRTAD 30




27|SequenceR|140|131|RGAPSGAPPS

>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 2 GAPSGAPPS 10
G+ SGAPPS
Sbjct: 293 GSLSGAPPS 301


>sp|DHYS_PYRFU|PROBABLE deoxyhypusine synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GAPSGAPPS 10
G+ SGAPPS
Sbjct: 293 GSLSGAPPS 301


>sp|DHYS_PYRAB|PROBABLE deoxyhypusine synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 GAPSGAPPS 10
G+ SGAPPS
Sbjct: 292 GSLSGAPPS 300


>sp|DHYS_THEGJ|PROBABLE deoxyhypusine synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 GAPSGAPPS 10
G+ SGAPPS
Sbjct: 293 GSLSGAPPS 301


>sp|DHYS_THEKO|PROBABLE deoxyhypusine synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 GAPSGAPPS 10
G+ SGAPPS
Sbjct: 293 GSLSGAPPS 301


>sp|DHYS_PYRHO|PROBABLE deoxyhypusine synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GAPSGAPP 9
G+ SGAPP
Sbjct: 292 GSLSGAPP 299


>sp|DHYS_METVS|PROBABLE deoxyhypusine synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GAPSGAPP 9
G+ SGAPP
Sbjct: 293 GSLSGAPP 300


>sp|DHYS_METJA|PROBABLE deoxyhypusine synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GAPSGAPP 9
G+ SGAPP
Sbjct: 288 GSLSGAPP 295


>sp|DHYS_HALSA|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 GAPSGAPP 9
G+ SGAPP
Sbjct: 283 GSLSGAPP 290


>sp|DHYS_HALS3|PROBABLE deoxyhypusine synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 GAPSGAPP 9
G+ SGAPP
Sbjct: 283 GSLSGAPP 290


>sp|PYRC_METMA|DIHYDROOROTASE mazei (strain ATCC BAA-159

Query: 1 RGAPSGAP 8
R APSG P
Sbjct: 327 RAAPSGVP 334


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 1 RGAPSGAP 8
R APSG P
Sbjct: 327 RAAPSGVP 334


>sp|MTMB2_METBA|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB3_METBF|MONOMETHYLAMINE methyltransferase MtmB3|Methanosarcina barkeri (strain Fusaro /

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB1_METBA|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB2_METBF|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina barkeri (strain Fusaro /

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB1_METBF|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina barkeri (strain Fusaro /

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB1_METAC|MONOMETHYLAMINE methyltransferase MtmB1|Methanosarcina acetivorans (strain ATCC

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|MTMB2_METAC|MONOMETHYLAMINE methyltransferase MtmB2|Methanosarcina acetivorans (strain ATCC

Query: 1 RGAPSGAPPS 10
+G P+G+P S
Sbjct: 127 QGGPTGSPIS 136


>sp|Y803_PYRIL|UPF0173 metal-dependent hydrolase Pisl_0803|Pyrobaculum islandicum (strain

Query: 1 RGAPSG 6
RGAPSG
Sbjct: 118 RGAPSG 123




28|SequenceR|145|136|SNYISRGAPS

>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 NYISRGAP 9
NYI+RG P
Sbjct: 560 NYIARGNP 567


>sp|SYM_THEKO|METHIONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NYISRGAP 9
NYI RG P
Sbjct: 560 NYIGRGNP 567


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 2 NYISRGAPS 10
++I RG+PS
Sbjct: 309 DFIERGSPS 317


>sp|RL10_METJA|LARGE ribosomal subunit protein uL10|Methanocaldococcus jannaschii

Query: 1 SNYISRGA 8
+NY+ RGA
Sbjct: 84 ANYVERGA 91


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 3 YISRGAPS 10
Y++RG+P+
Sbjct: 178 YVARGSPN 185


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NYISRG 7
NYISRG
Sbjct: 100 NYISRG 105


>sp|RADA_PYRFU|DNA repair and recombination protein|Pyrococcus furiosus (strain ATCC

Query: 1 SNYISRGA 8
S YI RGA
Sbjct: 246 SEYIGRGA 253


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 1 SNYISRGA 8
S YI RGA
Sbjct: 426 SEYIGRGA 433


>sp|RADA_PYRAB|DNA repair and recombination protein|Pyrococcus abyssi (strain GE5 /

Query: 1 SNYISRGA 8
S YI RGA
Sbjct: 250 SEYIGRGA 257


>sp|RAD50_METJA|DNA double-strand break repair Rad50|Methanocaldococcus jannaschii

Query: 1 SNYISRGAP 9
SNY+ G P
Sbjct: 595 SNYVINGKP 603


>sp|Y1919_PYRIL|UPF0248 protein Pisl_1919|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YISRGAP 9
+ISRG+P
Sbjct: 19 FISRGSP 25


>sp|Y1470_META3|UNCHARACTERIZED solute-binding protein Maeo_1470|Methanococcus aeolicus (strain

Query: 1 SNYISRGAP 9
+ YI +GAP
Sbjct: 2 NKYIKQGAP 10




29|SequenceR|150|141|CYVYFSNYIS

>sp|PYLB_METBF|3-METHYLORNITHINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CYVYFSNY 8
C++YFS Y
Sbjct: 63 CFIYFSTY 70


>sp|PYLB_METAC|3-METHYLORNITHINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CYVYFSNY 8
C++YFS Y
Sbjct: 63 CFIYFSTY 70


>sp|ARLY_SULAC|ARGININOSUCCINATE lyase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VYFSNYIS 10
+Y SNYIS
Sbjct: 41 LYLSNYIS 48


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CYVYFSNYIS 10
C V+F N IS
Sbjct: 108 CVVHFGNVIS 117


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 FSNYIS 10
FSNYIS
Sbjct: 567 FSNYIS 572


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 FSNYIS 10
FSNYIS
Sbjct: 568 FSNYIS 573


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CYVYFSN 7
CY++F N
Sbjct: 132 CYIHFGN 138


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CYVYFSNYIS 10
CY+Y +YI+
Sbjct: 78 CYLYKLHYIN 87


>sp|DPOL1_SULOH|DNA polymerase 1|Sulfurisphaera ohwakuensis

Query: 4 YFSNYI 9
YF+NYI
Sbjct: 158 YFNNYI 163


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 4 YFSNYIS 10
YFS Y+S
Sbjct: 301 YFSKYVS 307




30|SequenceR|155|146|QCPGKCYVYF

>sp|RL10E_THEPD|LARGE ribosomal subunit protein uL16|Thermofilum pendens (strain DSM

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SULTO|LARGE ribosomal subunit protein uL16|Sulfurisphaera tokodaii (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACS2|LARGE ribosomal subunit protein uL16|Saccharolobus solfataricus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACI7|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACI6|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACI4|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACI3|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACI2|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_SACI1|LARGE ribosomal subunit protein uL16|Saccharolobus islandicus (strain

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|RL10E_METS5|LARGE ribosomal subunit protein uL16|Metallosphaera sedula (strain ATCC

Query: 3 PGKCYVYF 10
PG+CY +F
Sbjct: 5 PGRCYRHF 12


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GKCYVY 9
GKCY+Y
Sbjct: 76 GKCYLY 81


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CPGKCY 7
CP KCY
Sbjct: 183 CPYKCY 188


>sp|RL10E_SULAC|LARGE ribosomal subunit protein uL16|Sulfolobus acidocaldarius (strain

Query: 3 PGKCYVYF 10
PG+CY F
Sbjct: 5 PGRCYRKF 12


>sp|GLCDH_METAR|GLUCOSE 1-dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 2 CPGKCY 7
CPG C+
Sbjct: 94 CPGMCF 99


>sp|Y1137_METTH|UNCHARACTERIZED protein MTH_1137|Methanothermobacter thermautotrophicus (strain

Query: 2 CPGKCYV 8
C G+CY+
Sbjct: 140 CGGQCYL 146


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 GKCYVYF 10
GKC YF
Sbjct: 17 GKCITYF 23


>sp|SUDHA_PYRFU|SULFIDE dehydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QCPGKCYV 8
QC G C V
Sbjct: 106 QCEGACVV 113


>sp|APBC_METJA|IRON-SULFUR cluster carrier protein|Methanocaldococcus jannaschii (strain

Query: 1 QCPGKC 6
+C GKC
Sbjct: 3 ECDGKC 8


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain

Query: 3 PGKCYVYF 10
PG YVY
Sbjct: 69 PGHAYVYL 76


>sp|Y808_METJA|UNCHARACTERIZED protein MJ0808|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPGKCYVY 9
CPG Y Y
Sbjct: 121 CPGISYTY 128




31|SequenceR|160|151|GPQVRQCPGK

>sp|AROA_CALMQ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 PQVRQCPG 9
P +RQC G
Sbjct: 73 PNLRQCGG 80


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 GPQVRQCPGK 10
G VRQ PG+
Sbjct: 291 GQLVRQMPGR 300


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 1 GPQVRQCPGK 10
G VRQ PG+
Sbjct: 299 GRLVRQMPGR 308


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PQVRQCPG 9
P+VR CP
Sbjct: 49 PKVRICPA 56


>sp|NADA_METB6|QUINOLINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 5 RQCPGK 10
++CPGK
Sbjct: 244 KECPGK 249


>sp|RPIA_AERPE|RIBOSE-5-PHOSPHATE isomerase A|Aeropyrum pernix (strain ATCC 700893

Query: 2 PQVRQCPGK 10
P+VR PGK
Sbjct: 160 PRVRTSPGK 168




32|SequenceR|165|156|QVRLKGPQVR

>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 1 QVRLKGPQVR 10
+V +KGP VR
Sbjct: 14 EVAIKGPSVR 23


>sp|KPYK_AERPE|PYRUVATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 VRLKGPQVR 10
V L+GP+VR
Sbjct: 66 VDLEGPRVR 74




33|SequenceR|170|161|RCTSCQVRLK

>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 CTSCQVRLK 10
C SCQ+RLK
Sbjct: 200 CDSCQLRLK 208


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RCTSCQVR 8
RCTSC+ R
Sbjct: 123 RCTSCEFR 130


>sp|QUEC_PICTO|7-CYANO-7-DEAZAGUANINE synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 RCTSCQVRLK 10
+C SC +RLK
Sbjct: 198 KCDSCLLRLK 207


>sp|DP2L_THEKO|DNA polymerase II large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 RCTSCQVRLK 10
RC C V LK
Sbjct: 758 RCPKCDVELK 767


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CTSCQVRLK 10
C+SC RLK
Sbjct: 199 CSSCLARLK 207


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CTSCQVRLK 10
C SC +RLK
Sbjct: 201 CDSCLLRLK 209


>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RCTSCQVR 8
+CTSC R
Sbjct: 123 KCTSCSYR 130


>sp|RF1_THEAC|PEPTIDE chain release factor subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 RCTSCQVRL 9
RC +CQ L
Sbjct: 332 RCPTCQAEL 340


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 RCTSCQ 6
RCTSC
Sbjct: 329 RCTSCH 334


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RCTSC 5
RCTSC
Sbjct: 91 RCTSC 95


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 RCTSC 5
RCTSC
Sbjct: 622 RCTSC 626


>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RCTSC 5
RCTSC
Sbjct: 123 RCTSC 127


>sp|TIAS_STAMF|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Staphylothermus marinus (strain

Query: 1 RCTSCQVRLK 10
RC C R+K
Sbjct: 372 RCPRCGARMK 381


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RCTSCQVR 8
RC SC R
Sbjct: 123 RCVSCSYR 130


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 CTSCQVRLK 10
C C V+LK
Sbjct: 747 CPKCNVKLK 755


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CTSCQVRLK 10
C C V+LK
Sbjct: 748 CPKCNVKLK 756


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 1 RCTSCQVRLK 10
RC++C+ R++
Sbjct: 213 RCSNCRGRMR 222


>sp|Y1684_METTH|UNCHARACTERIZED protein MTH_1684|Methanothermobacter thermautotrophicus (strain

Query: 1 RCTSCQVRL 9
RCT C V L
Sbjct: 344 RCTDCAVCL 352


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 RCTSCQVRLK 10
+C C RLK
Sbjct: 456 KCNKCGKRLK 465


>sp|RF1_METBU|PEPTIDE chain release factor subunit|Methanococcoides burtonii (strain DSM

Query: 1 RCTSCQVRLK 10
+CTSC K
Sbjct: 328 KCTSCDYEQK 337


>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 2 CTSCQV 7
CT CQV
Sbjct: 181 CTFCQV 186


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 2 CTSCQVRL 9
CTSC +L
Sbjct: 164 CTSCSDKL 171




34|SequenceR|175|166|TLTAQRCTSC

>sp|NPD1_ARCFU|NAD-DEPENDENT protein deacylase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TLTAQRCTSC 10
+L RCTSC
Sbjct: 118 SLRVVRCTSC 127


>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 3 TAQRCTSC 10
T Q CT+C
Sbjct: 280 TGQSCTAC 287


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 3 TAQRCTSC 10
T +RC+SC
Sbjct: 110 TFRRCSSC 117


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 6 RCTSC 10
RCTSC
Sbjct: 91 RCTSC 95


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 6 RCTSC 10
RCTSC
Sbjct: 329 RCTSC 333


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 6 RCTSC 10
RCTSC
Sbjct: 123 RCTSC 127


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 6 RCTSC 10
RCTSC
Sbjct: 622 RCTSC 626


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 3 TAQRCTSC 10
T+Q C+SC
Sbjct: 483 TSQTCSSC 490


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 4 AQRCTSC 10
A+RC++C
Sbjct: 211 ARRCSNC 217




35|SequenceR|180|171|PGQTLTLTAQ

>sp|Y099_SACS2|UPF0173 metal-dependent hydrolase SSO0099|Saccharolobus solfataricus

Query: 1 PGQTLTL 7
PGQT+TL
Sbjct: 221 PGQTITL 227


>sp|GATD_THEKO|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermococcus kodakarensis (strain ATCC

Query: 1 PGQTLTL 7
PG+TLT+
Sbjct: 45 PGETLTI 51


>sp|RPO3_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo3|Natronomonas pharaonis (strain ATCC

Query: 1 PGQTLTL 7
PG+T+TL
Sbjct: 79 PGETVTL 85


>sp|Y1552_ARCFU|UNCHARACTERIZED transporter AF_1552|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GQTLTLT 8
G+TLTLT
Sbjct: 246 GETLTLT 252




36|SequenceR|185|176|DDWCSPGQTL

>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 2 DWCSPGQT 9
DW +PG++
Sbjct: 681 DWVNPGES 688


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 2 DWCSPGQTL 10
D+C PG+ L
Sbjct: 101 DYCPPGKYL 109


>sp|Y597_METJA|UNCHARACTERIZED protein MJ0597|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DWCSPGQTL 10
DW PG+ L
Sbjct: 150 DWICPGKPL 158


>sp|Y488_METKA|PROTEIN MK0488|Methanopyrus kandleri (strain AV19 /

Query: 1 DDWCSP 6
D WCSP
Sbjct: 172 DWWCSP 177


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 3 WCSP 6
WCSP
Sbjct: 670 WCSP 673


>sp|Y2236_ARCFU|UNCHARACTERIZED protein AF_2236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 WCSPGQT 9
W +PG+T
Sbjct: 76 WMAPGKT 82




37|SequenceR|190|181|NPILVDDWCS

>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPILVDDWCS 10
NPI DD C+
Sbjct: 398 NPIFEDDGCA 407


>sp|SEPS_METBF|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 NPILVDD 7
NP++VDD
Sbjct: 70 NPLIVDD 76


>sp|NADM_AERPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 5 VDDWC 9
+DDWC
Sbjct: 64 LDDWC 68


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 1 NPILVDDW 8
+PIL+DD+
Sbjct: 741 HPILIDDF 748


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 1 NPILVDDW 8
+PIL+DD+
Sbjct: 742 HPILIDDF 749


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 1 NPILVDDW 8
+PIL+DD+
Sbjct: 65 HPILIDDF 72


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 1 NPILVDDW 8
+PIL+DD+
Sbjct: 741 HPILIDDF 748


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19

Query: 3 ILVDDW 8
I++DDW
Sbjct: 57 IMIDDW 62


>sp|METK_METMA|S-ADENOSYLMETHIONINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ILVDDWCS 10
+++DDW S
Sbjct: 374 VVIDDWLS 381


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ILVDDWCS 10
+++DDW S
Sbjct: 374 VVIDDWLS 381


>sp|RIFK_META3|RIBOFLAVIN kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NPILVDDW 8
NPI VDD+
Sbjct: 56 NPIEVDDF 63


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NPILVDD 7
NPI+VD+
Sbjct: 70 NPIIVDE 76


>sp|Y1285_SULAC|UPF0201 protein Saci_1285|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 NPILVDDWCS 10
+P++V DW +
Sbjct: 118 DPVIVVDWLT 127


>sp|CARB_METTP|CARBAMOYL phosphate synthase large chain|Methanothrix thermoacetophila

Query: 1 NPILVDDW 8
+P+L+DD+
Sbjct: 743 HPVLIDDF 750


>sp|Y1914_METTH|UPF0425 pyridoxal phosphate-dependent protein MTH_1914|Methanothermobacter

Query: 2 PILVDD 7
P+LVDD
Sbjct: 172 PVLVDD 177


>sp|RPO6_METAC|DNA-DIRECTED RNA polymerase subunit Rpo6|Methanosarcina acetivorans (strain

Query: 2 PILVDD 7
P+LVDD
Sbjct: 27 PVLVDD 32


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPILVDDWCS 10
NP+ +DW S
Sbjct: 227 NPLTNEDWKS 236


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 3 ILVDDWCS 10
ILVD W S
Sbjct: 21 ILVDPWLS 28


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ILVDDW 8
++VDDW
Sbjct: 192 LIVDDW 197


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ILVDDWCS 10
+++DDW S
Sbjct: 374 VVMDDWLS 381


>sp|CAS8A_METJA|CRISPR-ASSOCIATED protein Cas8a2/Csa4|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NPILVDD 7
NPI +DD
Sbjct: 177 NPIKIDD 183


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 NPILVDD 7
NP+L+D+
Sbjct: 68 NPLLIDE 74


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 69 NPVIVDE 75


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 69 NPVIVDE 75


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 69 NPVIVDE 75


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 69 NPVIVDE 75


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 69 NPVIVDE 75


>sp|SEPS_METJA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 70 NPVIVDE 76


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 NPILVDD 7
NP++VD+
Sbjct: 69 NPVIVDE 75


>sp|Y803_PYRIL|UPF0173 metal-dependent hydrolase Pisl_0803|Pyrobaculum islandicum

Query: 3 ILVDDWCS 10
IL+D W S
Sbjct: 20 ILIDPWIS 27


>sp|Y1073_CALMQ|UPF0173 metal-dependent hydrolase Cmaq_1073|Caldivirga maquilingensis

Query: 3 ILVDDWCS 10
IL+D W S
Sbjct: 21 ILIDPWIS 28




38|SequenceR|195|186|EGSMRNPILV

>sp|RNABP_PYRAB|RNA-BINDING protein PAB1135|Pyrococcus abyssi (strain GE5 /

Query: 1 EGSMRNPILV 10
EG NPILV
Sbjct: 50 EGYFGNPILV 59


>sp|SYR_PYRHO|ARGININE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 MRNPILV 10
M+NPILV
Sbjct: 315 MKNPILV 321


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 MRNPILV 10
+RNP+LV
Sbjct: 226 VRNPVLV 232


>sp|TRPC_PYRAE|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 MRNPILV 10
M+NP+LV
Sbjct: 229 MKNPVLV 235


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 SMRNPILV 10
S+RNPI++
Sbjct: 484 SLRNPIMM 491


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SMRNPIL 9
SMRNP++
Sbjct: 108 SMRNPLV 114


>sp|HIS4_ARCFU|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Archaeoglobus fulgidus (strain

Query: 3 SMRNPILV 10
S+RNP+ V
Sbjct: 186 SLRNPVYV 193


>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 4 MRNPILV 10
+RNPIL+
Sbjct: 189 VRNPILI 195




39|SequenceR|200|191|HPSQCEGSMR

>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 PSQCEGSMR 10
PSQ +GS+R
Sbjct: 6 PSQAQGSVR 14


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum (strain

Query: 2 PSQCEGSM 9
P QCE M
Sbjct: 168 PDQCEAKM 175


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 2 PSQCEG 7
P+QCEG
Sbjct: 1125 PAQCEG 1130


>sp|Y987_METTH|UNCHARACTERIZED protein MTH_987|Methanothermobacter thermautotrophicus (strain

Query: 1 HPSQCEG 7
HP C+G
Sbjct: 92 HPEDCDG 98


>sp|Y1847_ARCFU|UNCHARACTERIZED protein AF_1847|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PSQCEG 7
PS CEG
Sbjct: 2 PSHCEG 7




40|SequenceR|205|196|STGPCHPSQC

>sp|RL15E_METMP|LARGE ribosomal subunit protein eL15|Methanococcus maripaludis (strain

Query: 4 PCHPS 8
PCHPS
Sbjct: 135 PCHPS 139


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GPCHPS 8
GPCH S
Sbjct: 94 GPCHAS 99


>sp|VHCD_METVO|F420-NON-REDUCING hydrogenase vhc iron-sulfur subunit|Methanococcus voltae

Query: 3 GPCHPSQC 10
G CHP C
Sbjct: 66 GGCHPGDC 73


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STGPCHP 7
+TG CHP
Sbjct: 350 ATGICHP 356


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 STGPCHP 7
+TG CHP
Sbjct: 354 ATGICHP 360


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 STGPCHPSQ 9
S GP HP++
Sbjct: 253 SIGPWHPAR 261


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 STGPCHPSQ 9
S GP HP++
Sbjct: 255 SIGPWHPAR 263


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 1 STGPCHPSQ 9
S GP HP++
Sbjct: 252 SIGPWHPAR 260


>sp|NADE_METKA|NH(3)-DEPENDENT NAD(+) synthetase|Methanopyrus kandleri (strain AV19 /

Query: 4 PCHP 7
PCHP
Sbjct: 112 PCHP 115


>sp|MTHT_METTF|TYPE II methyltransferase M.MthTI|Methanothermobacter thermautotrophicus

Query: 3 GPCHP 7
PCHP
Sbjct: 246 APCHP 250


>sp|MTRA_METV3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus voltae (strain ATCC

Query: 2 TGPCH 6
+GPCH
Sbjct: 49 SGPCH 53


>sp|SYM_METMJ|METHIONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 STGPCH 6
+ GPCH
Sbjct: 15 TNGPCH 20


>sp|CBIC_METTH|COBALT-PRECORRIN-8 methylmutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 GPCHPSQC 10
G HPS+C
Sbjct: 85 GISHPSRC 92


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 STGPCH 6
+ GPCH
Sbjct: 13 ANGPCH 18


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 STGPCH 6
+ GPCH
Sbjct: 13 ANGPCH 18


>sp|SYM_METPE|METHIONINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 STGPCH 6
+ GPCH
Sbjct: 15 TNGPCH 20


>sp|MTRA_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain

Query: 2 TGPCH 6
+GPCH
Sbjct: 49 SGPCH 53


>sp|MTRA_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus aeolicus (strain ATCC

Query: 2 TGPCH 6
+GPCH
Sbjct: 49 SGPCH 53


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 3 GPCH 6
GPCH
Sbjct: 504 GPCH 507


>sp|MTRA_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanococcus maripaludis (strain

Query: 2 TGPCH 6
+GPCH
Sbjct: 49 SGPCH 53


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 STGPCH 6
+ GPCH
Sbjct: 15 TNGPCH 20


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 STGPCH 6
+ GPCH
Sbjct: 15 TNGPCH 20


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 STGPCHPS 8
+ G CHP+
Sbjct: 64 NVGHCHPT 71


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 STGPCHPS 8
+ G CHP+
Sbjct: 64 NVGHCHPT 71


>sp|SLAA_ACIAM|S-LAYER protein A|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 4 PCHP 7
PCHP
Sbjct: 940 PCHP 943


>sp|VHOG_METMA|F420 non-reducing hydrogenase I small|Methanosarcina mazei (strain ATCC

Query: 4 PCHP 7
PCHP
Sbjct: 228 PCHP 231


>sp|MTRA_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus jannaschii

Query: 3 GPCH 6
GPCH
Sbjct: 50 GPCH 53


>sp|MTRA_METFA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit A|Methanocaldococcus fervens (strain

Query: 3 GPCH 6
GPCH
Sbjct: 50 GPCH 53


>sp|CCA_AERPE|CCA-ADDING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 STGPC 5
STGPC
Sbjct: 435 STGPC 439




41|SequenceR|210|201|FFFEASTGPC

>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 1 FFFEASTGP 9
F+F A TGP
Sbjct: 337 FYFTADTGP 345


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain ATCC

Query: 1 FFFEASTGP 9
FF A TGP
Sbjct: 310 LFFTADTGP 318




42|SequenceR|215|206|HAGCKFFFEA

>sp|Y672_METJA|UNCHARACTERIZED transporter MJ0672|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AGCKFFFE 9
AGC +FFE
Sbjct: 36 AGCLWFFE 43


>sp|KORA_METTM|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter marburgensis (strain

Query: 2 AGCKFF 7
AGC+FF
Sbjct: 20 AGCRFF 25


>sp|KORA_METTH|2-OXOGLUTARATE synthase subunit KorA|Methanothermobacter thermautotrophicus

Query: 2 AGCKFF 7
AGC+FF
Sbjct: 20 AGCRFF 25


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 2 AGCKFF 7
AGC+FF
Sbjct: 19 AGCRFF 24


>sp|KORA_ARCFU|2-OXOGLUTARATE synthase subunit KorA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HAGCKFF 7
+AGC FF
Sbjct: 18 NAGCNFF 24


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 3 GCKFFFEA 10
G K FFEA
Sbjct: 157 GAKTFFEA 164


>sp|KCY_HALLT|CYTIDYLATE kinase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HAGCKFFFEA 10
HA +F+F+A
Sbjct: 91 HADFRFWFDA 100


>sp|Y1358_METJA|UNCHARACTERIZED protein MJ1358|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CKFFFE 9
CK+F+E
Sbjct: 142 CKYFYE 147




43|SequenceR|220|211|KDSTPHAGCK

>sp|PYRB_IGNH4|ASPARTATE carbamoyltransferase catalytic subunit|Ignicoccus hospitalis

Query: 2 DSTPHAG 8
DSTPHA
Sbjct: 276 DSTPHAA 282


>sp|PYRB_PYRCJ|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum calidifontis

Query: 2 DSTPHA 7
DSTPHA
Sbjct: 276 DSTPHA 281


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 KDSTPH 6
KD+TPH
Sbjct: 826 KDNTPH 831


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 KDSTPH 6
KD+TPH
Sbjct: 826 KDNTPH 831


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 KDSTPH 6
KD+TPH
Sbjct: 826 KDNTPH 831


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 KDSTPH 6
KD+TPH
Sbjct: 826 KDNTPH 831


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 KDSTPH 6
KD+TPH
Sbjct: 826 KDNTPH 831


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 KDSTPH 6
KD+TPH
Sbjct: 826 KDNTPH 831


>sp|PYRB_PYRNV|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum neutrophilum

Query: 2 DSTPHA 7
D+TPHA
Sbjct: 276 DATPHA 281


>sp|PYRB_METAC|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina acetivorans

Query: 2 DSTPHA 7
D+TPHA
Sbjct: 278 DATPHA 283


>sp|KPRS2_ARCFU|RIBOSE-PHOSPHATE pyrophosphokinase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KDSTPHAGCK 10
K + HAGC+
Sbjct: 158 KTAAKHAGCE 167


>sp|PYRB_PYRAR|ASPARTATE carbamoyltransferase catalytic subunit|Pyrobaculum arsenaticum

Query: 2 DSTPHA 7
D+TPHA
Sbjct: 276 DNTPHA 281


>sp|PYRB_METMA|ASPARTATE carbamoyltransferase catalytic subunit|Methanosarcina mazei (strain

Query: 2 DSTPHA 7
D TPHA
Sbjct: 279 DDTPHA 284


>sp|PYRB_THEPD|ASPARTATE carbamoyltransferase catalytic subunit|Thermofilum pendens (strain

Query: 2 DSTPHA 7
D TPHA
Sbjct: 287 DGTPHA 292


>sp|SYM_METST|METHIONINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 DSTPH 6
DSTPH
Sbjct: 177 DSTPH 181


>sp|RS11_NANEQ|SMALL ribosomal subunit protein uS11|Nanoarchaeum equitans (strain

Query: 4 TPHAGC 9
TPH GC
Sbjct: 114 TPHDGC 119




44|SequenceR|225|216|AVSTEKDSTP

***** No hits found ******


45|SequenceR|230|221|AILHLAVSTE

>sp|ENO_HALMA|ENOLASE marismortui (strain ATCC 43049

Query: 2 ILHLAVSTE 10
I HLAV+T+
Sbjct: 365 IAHLAVATD 373


>sp|ENO_HALWD|ENOLASE walsbyi (strain DSM 16790

Query: 2 ILHLAVSTE 10
I HLAV+T+
Sbjct: 365 IAHLAVATD 373


>sp|ENO_NATPD|ENOLASE pharaonis (strain ATCC 35678

Query: 2 ILHLAVSTE 10
I HLAV+T+
Sbjct: 363 IAHLAVATD 371


>sp|ENO_HALLT|ENOLASE lacusprofundi (strain ATCC 49239

Query: 2 ILHLAVSTE 10
I HLAV+T+
Sbjct: 364 IAHLAVATD 372




46|SequenceR|235|226|NRSNTAILHL

***** No hits found ******


47|SequenceR|240|231|TICTINRSNT

>sp|G3P_SACI2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 TICTINR 7
TICTIN+
Sbjct: 147 TICTINK 153


>sp|G3P_SACI7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 TICTINR 7
TICTIN+
Sbjct: 147 TICTINK 153


>sp|G3P_SACI6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 TICTINR 7
TICTIN+
Sbjct: 147 TICTINK 153


>sp|G3P_SACI3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 TICTINR 7
TICTIN+
Sbjct: 147 TICTINK 153


>sp|G3P_SACI1|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 TICTINR 7
TICTIN+
Sbjct: 147 TICTINK 153


>sp|G3P_SACI4|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 TICTINR 7
TICTIN+
Sbjct: 147 TICTINK 153


>sp|G3P_METS5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 1 TICTINR 7
T+CT+NR
Sbjct: 147 TLCTLNR 153


>sp|G3P_AERPE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ICTINR 7
ICT+NR
Sbjct: 151 ICTLNR 156


>sp|G3P_SACS2|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 TICTINR 7
TICT+N+
Sbjct: 147 TICTVNK 153




48|SequenceR|245|236|RVDTCTICTI

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 3 DTCTICT 9
DTCT+CT
Sbjct: 53 DTCTLCT 59


>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 DTCTIC 8
DTCT+C
Sbjct: 406 DTCTMC 411


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 DTCTIC 8
DTCT+C
Sbjct: 406 DTCTMC 411


>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 2 VDTCTIC 8
VDTC +C
Sbjct: 254 VDTCPVC 260


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 3 DTCTIC 8
DTC++C
Sbjct: 403 DTCSMC 408


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 2 VDTCTICTI 10
+DT +CTI
Sbjct: 307 LDTIVVCTI 315


>sp|COFG_HALSA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 700922

Query: 4 TCTICT 9
TCT CT
Sbjct: 56 TCTYCT 61


>sp|COFG_HALS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Halobacterium salinarum (strain ATCC 29341

Query: 4 TCTICT 9
TCT CT
Sbjct: 56 TCTYCT 61


>sp|COFG_HALMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TCTICT 9
TCT CT
Sbjct: 53 TCTYCT 58


>sp|ATGT_HALVD|TRNA-GUANINE(15) transglycosylase|Haloferax volcanii (strain ATCC 29605

Query: 4 TCTICT 9
TC ICT
Sbjct: 280 TCPICT 285


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 VDTCTICTI 10
VDTC+I I
Sbjct: 216 VDTCSIMGI 224


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 3 DTCTICT 9
+TC +CT
Sbjct: 36 NTCPVCT 42


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 DTCTICT 9
D CT CT
Sbjct: 43 DVCTECT 49


>sp|KPTA_HALMA|PROBABLE RNA 2'-phosphotransferase|Haloarcula marismortui (strain ATCC

Query: 3 DTCTIC 8
DTC +C
Sbjct: 17 DTCPVC 22


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 DTCTIC 8
D CT+C
Sbjct: 405 DACTMC 410


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 DTCTIC 8
D CT+C
Sbjct: 406 DACTMC 411


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DTCTIC 8
D CT+C
Sbjct: 406 DACTMC 411


>sp|THIC1_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina barkeri (strain Fusaro /

Query: 3 DTCTIC 8
D CT+C
Sbjct: 406 DACTMC 411


>sp|Y1135_METHJ|UPF0179 protein Mhun_1135|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RVDTCTICTI 10
R D C CTI
Sbjct: 27 RADQCESCTI 36


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 DTCTICTI 10
D C +CT+
Sbjct: 66 DFCNLCTM 73


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 DTCTIC 8
D CT+C
Sbjct: 404 DACTMC 409


>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 VDTCTICTI 10
+DTC+I I
Sbjct: 203 IDTCSIMEI 211


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 2 VDTCTICT 9
+DTC++ T
Sbjct: 217 IDTCSLMT 224


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus

Query: 3 DTCTICTI 10
D C +CT+
Sbjct: 66 DMCCLCTM 73




49|SequenceR|250|241|VLVPSRVDTC

>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VLVPSRVDTC 10
VL+PSR TC
Sbjct: 74 VLIPSREATC 83


>sp|NADA_PYRAB|QUINOLINATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 VLVPSRVDTC 10
VL+PSR TC
Sbjct: 74 VLLPSRRATC 83


>sp|WTPA_ARCFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LVPSRVDT 9
LVP R DT
Sbjct: 323 LVPPRADT 330


>sp|GGR1_METBU|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanococcoides burtonii (strain DSM 6242

Query: 2 LVPSRVDTC 10
L PS ++TC
Sbjct: 172 LKPSHIETC 180


>sp|NADA_THEON|QUINOLINATE synthase|Thermococcus onnurineus (strain NA1)

Query: 1 VLVPSRVDTC 10
VL+P+R TC
Sbjct: 77 VLLPTRRATC 86


>sp|NADA_THEGJ|QUINOLINATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VLVPSRVDTC 10
VL+P++ TC
Sbjct: 77 VLLPAKTATC 86


>sp|TRPD_METJA|ANTHRANILATE phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 3 VPSRVDTC 10
VP +DTC
Sbjct: 72 VPKLLDTC 79


>sp|NADA_PYRFU|QUINOLINATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VLVPSRVDTC 10
VL+P++ TC
Sbjct: 78 VLIPNKRATC 87




50|SequenceR|255|246|SNCQFVLVPS

>sp|RFCS_METMA|REPLICATION factor C small subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SNCQFVL 7
SNC+F+L
Sbjct: 140 SNCRFIL 146


>sp|RFCS_METAC|REPLICATION factor C small subunit|Methanosarcina acetivorans (strain ATCC

Query: 1 SNCQFVL 7
SNC+F+L
Sbjct: 140 SNCRFIL 146


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 3 CQFVLVPS 10
C F++VPS
Sbjct: 250 CSFLVVPS 257


>sp|G1PDH_NATPD|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NCQFVLVPS 10
NC F+ VP+
Sbjct: 112 NCGFISVPT 120


>sp|DTDA_PICTO|D-AMINOACYL-TRNA deacylase|Picrophilus torridus (strain ATCC 700027

Query: 2 NCQFVLV 8
NC F+L+
Sbjct: 222 NCSFILI 228


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SNCQFVLVP 9
+NC +L+P
Sbjct: 160 ANCTIMLIP 168


>sp|LONB_METTH|ARCHAEAL Lon protease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 CQFVLVPS 10
C FVLV S
Sbjct: 289 CDFVLVAS 296


>sp|RFCS_METBF|REPLICATION factor C small subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 SNCQFVL 7
+NC+F+L
Sbjct: 136 NNCRFIL 142


>sp|COFC_METRM|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 2 NCQFVLVPS 10
N F++VPS
Sbjct: 133 NFDFIIVPS 141




51|SequenceR|260|251|CIVHRSNCQF

***** No hits found ******


52|SequenceR|265|256|HFCDLCIVHR

>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 HFCDLCIVH 9
H DLC VH
Sbjct: 379 HLSDLCNVH 387


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 4 DLCIVHR 10
D C+VHR
Sbjct: 231 DYCLVHR 237


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 2 FCDLC 6
FCD+C
Sbjct: 72 FCDMC 76


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 3 CDLCIVHR 10
CD C HR
Sbjct: 123 CDACGAHR 130


>sp|RPO3_PICTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Picrophilus torridus (strain ATCC

Query: 3 CDLCIV 8
CDLC V
Sbjct: 97 CDLCTV 102


>sp|Y811_METTH|UPF0305 protein MTH_811|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 FCDLCIVHR 10
CD+CI +
Sbjct: 143 LCDICIARQ 151


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 HFCDLCI 7
H+C C+
Sbjct: 324 HYCGFCV 330


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 4 DLCIVHR 10
++C+VHR
Sbjct: 252 EVCLVHR 258


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 3 CDLCI 7
CDLC+
Sbjct: 568 CDLCL 572


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 3 CDLCI 7
CDLC+
Sbjct: 568 CDLCL 572


>sp|UDGA_PYRAE|TYPE-4 uracil-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CDLCIVHR 10
CD C +H+
Sbjct: 13 CDKCPLHK 20


>sp|Y1342_METJA|UNCHARACTERIZED protein MJ1342|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HFCDLC 6
+FCD+C
Sbjct: 34 NFCDMC 39


>sp|FPOI_METMA|F(420)H(2) dehydrogenase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FCDLCI 7
FC LCI
Sbjct: 127 FCGLCI 132




53|SequenceR|270|261|TVCYLHFCDL

>sp|Y3117_METAC|UPF0228 protein MA_3117|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VCYLHFCD 9
VCY+HF D
Sbjct: 134 VCYIHFGD 141


>sp|Y401_METMA|UPF0228 protein MM_0401|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VCYLHF 7
VCY+HF
Sbjct: 131 VCYIHF 136


>sp|RL6_NANEQ|LARGE ribosomal subunit protein uL6|Nanoarchaeum equitans (strain

Query: 2 VCYLHF 7
VCY HF
Sbjct: 91 VCYTHF 96


>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 CYLHFCDL 10
C +H+C+L
Sbjct: 335 CDVHYCEL 342


>sp|GATD_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanocaldococcus jannaschii (strain

Query: 1 TVCYLH 6
T CYLH
Sbjct: 225 TFCYLH 230


>sp|GATD_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain DSM

Query: 1 TVCYLH 6
TVC+LH
Sbjct: 225 TVCHLH 230


>sp|GATD_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C7 /

Query: 1 TVCYLH 6
TVC+LH
Sbjct: 225 TVCHLH 230


>sp|GATD_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C6 /

Query: 1 TVCYLH 6
TVC+LH
Sbjct: 225 TVCHLH 230


>sp|GATD_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanococcus maripaludis (strain C5 /

Query: 1 TVCYLH 6
TVC+LH
Sbjct: 225 TVCHLH 230


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 YLHFCD 9
YLHF D
Sbjct: 402 YLHFAD 407


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 1 TVCYLHFCDL 10
T+ YL CD+
Sbjct: 106 TIAYLDACDV 115


>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 4 YLHFCDL 10
Y HF DL
Sbjct: 134 YFHFIDL 140


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 4 YLHFCDL 10
Y HF DL
Sbjct: 133 YFHFIDL 139


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 4 YLHFCDL 10
Y HF DL
Sbjct: 131 YFHFIDL 137


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 HFCDL 10
HFCD+
Sbjct: 224 HFCDV 228


>sp|PYRG_METTH|CTP synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 6 HFCDL 10
HFCD+
Sbjct: 230 HFCDV 234


>sp|PYRG_METST|CTP synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 HFCDL 10
HFCD+
Sbjct: 227 HFCDV 231


>sp|TOP1_METTH|DNA topoisomerase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 YLHFCD 9
Y+H CD
Sbjct: 108 YIHACD 113


>sp|AROD_METHJ|3-DEHYDROQUINATE dehydratase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 TVCYLH 6
T CY+H
Sbjct: 196 TYCYIH 201


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VCYLHFC 8
V YLH C
Sbjct: 6 VAYLHSC 12


>sp|GPN_PYRAB|GPN-LOOP GTPase PAB0955|Pyrococcus abyssi (strain GE5 /

Query: 1 TVCYLHFC 8
T+ Y H+C
Sbjct: 235 TLAYEHYC 242




54|SequenceR|275|266|RDNLRTVCYL

>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 DNLRTVC 8
DNLR VC
Sbjct: 504 DNLRQVC 510


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 2 DNLRTVCY 9
DNL +C+
Sbjct: 304 DNLEVICF 311


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DNLRTVC 8
DNL+T C
Sbjct: 256 DNLKTSC 262


>sp|DNLI_METS3|DNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DNLRTVCYL 10
+NL+TV Y+
Sbjct: 458 NNLKTVAYV 466


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DNLRTVCY 9
DN R +CY
Sbjct: 16 DNKRRLCY 23


>sp|DADD_METVS|5'-DEOXYADENOSINE deaminase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DNLRTVC 8
DN+ TVC
Sbjct: 235 DNVTTVC 241


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 DNLRTVCYL 10
DN+R +C L
Sbjct: 626 DNVRIMCVL 634


>sp|DADD_METMP|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DNLRTVC 8
DN+ T+C
Sbjct: 235 DNVNTIC 241


>sp|DADD_METM6|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C6 /

Query: 2 DNLRTVC 8
DN+ T+C
Sbjct: 235 DNVNTIC 241




55|SequenceR|280|271|DHVFQRDNLR

>sp|PROB_METBU|GLUTAMATE 5-kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DHVFQRDNL 9
DHV Q+DN+
Sbjct: 363 DHVVQKDNI 371


>sp|COXX2_PYRCJ|PROTOHEME IX farnesyltransferase 2|Pyrobaculum calidifontis (strain DSM

Query: 1 DHVFQRD 7
+HVF+RD
Sbjct: 54 NHVFERD 60


>sp|DIPPS_THEKO|BIFUNCTIONAL IPC transferase and DIPP|Thermococcus kodakarensis (strain ATCC

Query: 1 DHVFQRD 7
DHV+ RD
Sbjct: 104 DHVYSRD 110


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DHVFQRDNLR 10
+HV++RD R
Sbjct: 205 NHVYERDRDR 214


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DHVFQR 6
DHVF+R
Sbjct: 283 DHVFRR 288


>sp|YPV8_METTF|UNCHARACTERIZED protein ORF8|Methanothermobacter thermautotrophicus

Query: 1 DHVFQRDNL 9
DH+ +RD+L
Sbjct: 277 DHILRRDSL 285


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DHVFQRDNLR 10
DHV RD LR
Sbjct: 175 DHVAARDGLR 184


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DHVFQRDNLR 10
DHV RD LR
Sbjct: 175 DHVAARDGLR 184


>sp|RL4_METJA|LARGE ribosomal subunit protein uL4|Methanocaldococcus jannaschii (strain

Query: 2 HVFQRDNL 9
HVF+ +NL
Sbjct: 130 HVFETENL 137


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 1 DHVFQRDNL 9
DH+ +RD L
Sbjct: 277 DHILRRDGL 285


>sp|IF2B_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 1 DHVFQRD 7
D+VFQ+D
Sbjct: 25 DYVFQKD 31




56|SequenceR|285|276|YGLQPDHVFQ

>sp|TRPF_METM6|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C6 /

Query: 2 GLQPDHVFQ 10
GL PD+VF+
Sbjct: 161 GLDPDNVFE 169


>sp|CYAS_METMA|CYSTEATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLQPDHVFQ 10
G PDH FQ
Sbjct: 222 GKMPDHYFQ 230


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLQPDHVFQ 10
G PDH FQ
Sbjct: 222 GKMPDHYFQ 230


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GLQPDHVFQ 10
G PDH FQ
Sbjct: 222 GKMPDHYFQ 230


>sp|PYRG_PYRAE|CTP synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YGLQPDHV 8
YG+QPD V
Sbjct: 199 YGIQPDAV 206


>sp|PYRG_PYRCJ|CTP synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 YGLQPDHV 8
YG+QPD V
Sbjct: 199 YGIQPDAV 206


>sp|TRPF_METM7|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanococcus maripaludis (strain C7 /

Query: 2 GLQPDHVF 9
GL PD+VF
Sbjct: 161 GLDPDNVF 168


>sp|RL22_METBU|LARGE ribosomal subunit protein uL22|Methanococcoides burtonii (strain

Query: 2 GLQPDHVF 9
GL P+H+F
Sbjct: 103 GLNPEHMF 110


>sp|HIS8_METAR|HISTIDINOL-PHOSPHATE aminotransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YGLQPDHVFQ 10
YG PD +F+
Sbjct: 232 YGFMPDWIFR 241


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 YGLQPDHVF 9
YG+ PD +F
Sbjct: 353 YGIPPDGIF 361


>sp|KTHY_METJA|PROBABLE thymidylate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGLQPDHVF 9
Y L+PD VF
Sbjct: 113 YALKPDIVF 121


>sp|PRIS_METMA|DNA primase small subunit PriS|Methanosarcina mazei (strain ATCC

Query: 1 YGLQPDHVF 9
YG+ P HV+
Sbjct: 63 YGMAPAHVY 71


>sp|AROE_THEAC|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YGLQPDHVFQ 10
+G++PD +F+
Sbjct: 246 FGIRPDSIFR 255


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 YGLQPDHVFQ 10
YG++PD + +
Sbjct: 38 YGIEPDEIVK 47


>sp|PRIS_METAC|DNA primase small subunit PriS|Methanosarcina acetivorans (strain

Query: 1 YGLQPDHVF 9
YG+ P HV+
Sbjct: 63 YGMAPAHVY 71


>sp|MCH_METLZ|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 LQPDHVFQ 10
LQP H F+
Sbjct: 117 LQPKHTFE 124


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro

Query: 1 YGLQPDHVF 9
YG+ P HV+
Sbjct: 63 YGMAPAHVY 71


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 YGLQPDH 7
YGL+P H
Sbjct: 206 YGLKPTH 212


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGLQPDHV 8
YGL PD V
Sbjct: 385 YGLSPDDV 392


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLQPDHVFQ 10
G PDH+F+
Sbjct: 55 GKTPDHLFK 63


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YGLQPDHVF 9
YG++P +VF
Sbjct: 75 YGIKPVYVF 83


>sp|HIS8_THEGJ|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 YGLQPDHV 8
YG+ PD+V
Sbjct: 68 YGVSPDNV 75


>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain

Query: 2 GLQPDHV 8
GLQP H+
Sbjct: 44 GLQPQHL 50


>sp|RTCA_PYRIL|RNA 3'-terminal phosphate cyclase|Pyrobaculum islandicum (strain DSM

Query: 2 GLQPDHV 8
GLQP H+
Sbjct: 44 GLQPQHL 50


>sp|RTCA_PYRCJ|RNA 3'-terminal phosphate cyclase|Pyrobaculum calidifontis (strain

Query: 2 GLQPDHV 8
GLQP H+
Sbjct: 43 GLQPQHL 49


>sp|RTCA_PYRAE|RNA 3'-terminal phosphate cyclase|Pyrobaculum aerophilum (strain ATCC

Query: 2 GLQPDHV 8
GLQP H+
Sbjct: 44 GLQPQHL 50


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 2 GLQPDHV 8
GLQP H+
Sbjct: 43 GLQPQHL 49


>sp|RTCA_CALMQ|RNA 3'-terminal phosphate cyclase|Caldivirga maquilingensis (strain

Query: 2 GLQPDHV 8
GLQP H+
Sbjct: 43 GLQPQHL 49


>sp|SRP19_METAR|SIGNAL recognition particle 19 kDa|Methanocella arvoryzae (strain DSM

Query: 2 GLQPDHV 8
GL P+HV
Sbjct: 48 GLHPEHV 54


>sp|IF2B_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 5 PDHVFQ 10
PD+VFQ
Sbjct: 24 PDYVFQ 29


>sp|FEN_NANEQ|FLAP endonuclease 1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YGLQPDHVF 9
YG++P +VF
Sbjct: 72 YGIKPIYVF 80


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 2 GLQPDHVF 9
GL+PD +F
Sbjct: 180 GLEPDRMF 187


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YGLQPDHV 8
YG++PD +
Sbjct: 232 YGIEPDMI 239


>sp|TET_PYRHO|TETRAHEDRAL aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YGLQPDHVF 9
+G++PD+ F
Sbjct: 224 FGIEPDYGF 232


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 1 YGLQPDH 7
YG+ P+H
Sbjct: 304 YGVSPEH 310


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 YGLQPD 6
YGL PD
Sbjct: 49 YGLSPD 54


>sp|CS3HE_METJA|CRISPR-ASSOCIATED helicase Cas3|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGLQPDHVF 9
YGL+ H F
Sbjct: 115 YGLEETHAF 123


>sp|GGR1_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 1|Methanopyrus kandleri (strain AV19 /

Query: 3 LQPDHV 8
L+PDH+
Sbjct: 165 LEPDHI 170


>sp|CDC68_HALSA|ORC1-TYPE DNA replication protein 8|Halobacterium salinarum (strain ATCC

Query: 2 GLQPDHVF 9
G +PD+VF
Sbjct: 47 GWEPDNVF 54


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 YGLQPD 6
YGL PD
Sbjct: 302 YGLDPD 307


>sp|PYRH_PYRAE|URIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLQPDHV 8
G +PDHV
Sbjct: 196 GRRPDHV 202


>sp|SYK_METTH|LYSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YGLQPDHVFQ 10
+GL+P FQ
Sbjct: 500 HGLKPQKAFQ 509


>sp|SYA_HALLT|ALANINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 YGLQPDHV 8
+G+QPD V
Sbjct: 462 HGIQPDMV 469


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 YGLQPDHV 8
+G+QPD V
Sbjct: 462 HGIQPDMV 469


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 GLQPDHVF 9
G +PDH++
Sbjct: 878 GGKPDHIY 885


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 YGLQPDHV 8
+G+QPD V
Sbjct: 461 HGIQPDMV 468


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YGLQPDHVFQ 10
YG+ PD V +
Sbjct: 986 YGVDPDVVIE 995




57|SequenceR|290|281|VCPLSYGLQP

>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain

Query: 1 VCPLSYGL 8
VCPLS+GL
Sbjct: 63 VCPLSHGL 70


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain

Query: 1 VCPLSYGL 8
VCPLS+GL
Sbjct: 63 VCPLSHGL 70


>sp|DCDB_METJA|DCTP deaminase, dUMP-forming|Methanocaldococcus jannaschii (strain

Query: 1 VCPLSYGL 8
VCPL+Y L
Sbjct: 67 VCPLNYNL 74


>sp|TRUB_METMP|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain DSM

Query: 1 VCPLSYGLQ 9
V PL YGLQ
Sbjct: 223 VKPLEYGLQ 231


>sp|TRUB_METM7|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C7

Query: 1 VCPLSYGLQ 9
V PL YGLQ
Sbjct: 223 VKPLEYGLQ 231


>sp|TRUB_METM6|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C6

Query: 1 VCPLSYGLQ 9
V PL YGLQ
Sbjct: 223 VKPLEYGLQ 231


>sp|TRUB_METM5|PROBABLE tRNA pseudouridine synthase B|Methanococcus maripaludis (strain C5

Query: 1 VCPLSYGLQ 9
V PL YGLQ
Sbjct: 223 VKPLEYGLQ 231


>sp|AMPPA_METVS|AMP phosphorylase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CPLSYGLQP 10
C L+YG QP
Sbjct: 317 CVLTYGGQP 325


>sp|AMPPA_METMP|AMP phosphorylase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CPLSYGLQP 10
C L+YG QP
Sbjct: 317 CVLTYGGQP 325


>sp|AMPPA_METM7|AMP phosphorylase|Methanococcus maripaludis (strain C7 /

Query: 2 CPLSYGLQP 10
C L+YG QP
Sbjct: 317 CVLTYGGQP 325


>sp|AMPPA_METM6|AMP phosphorylase|Methanococcus maripaludis (strain C6 /

Query: 2 CPLSYGLQP 10
C L+YG QP
Sbjct: 317 CVLTYGGQP 325


>sp|AMPPA_METM5|AMP phosphorylase|Methanococcus maripaludis (strain C5 /

Query: 2 CPLSYGLQP 10
C L+YG QP
Sbjct: 317 CVLTYGGQP 325


>sp|AMPPA_META3|AMP phosphorylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CPLSYGLQP 10
C L+YG QP
Sbjct: 316 CVLTYGGQP 324


>sp|AMPPA_METBU|AMP phosphorylase|Methanococcoides burtonii (strain DSM 6242

Query: 2 CPLSYGLQP 10
C L+YG P
Sbjct: 315 CALTYGASP 323


>sp|DPS_SACS2|DNA protection during starvation protein|Saccharolobus solfataricus

Query: 1 VCPLSYGLQP 10
VC ++YG P
Sbjct: 134 VCDMTYGKDP 143


>sp|TOP6B_PYRFU|TYPE 2 DNA topoisomerase 6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VCPLSYGLQP 10
+ P +YGL+P
Sbjct: 354 LAPPTYGLRP 363


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 2 CPLSYGLQP 10
CPL+Y P
Sbjct: 25 CPLNYHQSP 33


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLSYGLQP 10
PLSY ++P
Sbjct: 277 PLSYWIEP 284


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 5 SYGLQP 10
+YGLQP
Sbjct: 864 TYGLQP 869


>sp|IPYR_PICTO|INORGANIC pyrophosphatase|Picrophilus torridus (strain ATCC 700027

Query: 1 VCPLSYGLQP 10
V PL YGL P
Sbjct: 55 VYPLEYGLIP 64


>sp|MCRC_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro

Query: 1 VCPLSYGLQ 9
VC ++YG++
Sbjct: 54 VCEITYGMR 62


>sp|NREB_ARCFU|DNA repair protein NreB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VCPLSYGLQP 10
VCPL L+P
Sbjct: 16 VCPLMPSLRP 25


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 2 CPLSYGLQ 9
CP+ YG++
Sbjct: 298 CPVLYGIR 305


>sp|TIAS_ARCFU|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Archaeoglobus fulgidus (strain

Query: 2 CPLSYGLQ 9
CP+ YG++
Sbjct: 210 CPVLYGIR 217


>sp|HIS5_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 2 CPLSYGL 8
C L+YGL
Sbjct: 126 CELTYGL 132


>sp|MCRC_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 1 VCPLSYGLQ 9
VC ++YG++
Sbjct: 39 VCEITYGIR 47


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VCPLSYGL 8
V PLSYG
Sbjct: 76 VIPLSYGF 83


>sp|MCRC_METVA|METHYL-COENZYME M reductase operon protein|Methanococcus vannielii

Query: 1 VCPLSYGLQ 9
VC ++YG++
Sbjct: 54 VCEITYGIR 62


>sp|MCRC_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VCPLSYGLQ 9
VC ++YG++
Sbjct: 54 VCEITYGIR 62




58|SequenceR|295|286|NPCGAVCPLS

>sp|RS8_METB6|SMALL ribosomal subunit protein uS8|Methanoregula boonei (strain DSM

Query: 1 NPCGAVCP 8
N CGA+CP
Sbjct: 70 NKCGAICP 77


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NPCGAVCP 8
N CGA CP
Sbjct: 351 NLCGAPCP 358


>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 NPCGAVCPL 9
+P G VCP+
Sbjct: 112 HPSGQVCPI 120


>sp|HIS8_HALLT|HISTIDINOL-PHOSPHATE aminotransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NPCGAVCPL 9
NP G+V PL
Sbjct: 165 NPSGSVMPL 173


>sp|RS8_METS5|SMALL ribosomal subunit protein uS8|Metallosphaera sedula (strain ATCC

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAITP 77


>sp|RS8_METMJ|SMALL ribosomal subunit protein uS8|Methanoculleus marisnigri (strain

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAISP 77


>sp|NRPR_METJA|GLOBAL nitrogen regulator NrpR|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NPCGAVCPLS 10
N C +CP+S
Sbjct: 286 NYCVEICPMS 295


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 CGAVCPLS 10
CG CP++
Sbjct: 413 CGGYCPMN 420


>sp|RS8_METPE|SMALL ribosomal subunit protein uS8|Methanosphaerula palustris (strain

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAITP 77


>sp|THIC_SULTO|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC_SULAC|PHOSPHOMETHYLPYRIMIDINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CGAVCPL 9
CG CP+
Sbjct: 411 CGGYCPM 417


>sp|RS8_METVS|SMALL ribosomal subunit protein uS8|Methanococcus vannielii (strain

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METVO|SMALL ribosomal subunit protein uS8|Methanococcus voltae

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METVA|SMALL ribosomal subunit protein uS8|Methanococcus vannielii

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METTL|SMALL ribosomal subunit protein uS8|Methanothermococcus

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METMP|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METM7|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METM6|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|RS8_METM5|SMALL ribosomal subunit protein uS8|Methanococcus maripaludis (strain

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVKP 77


>sp|FER9_METJA|UNCHARACTERIZED ferredoxin MJ0265|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PCGAVCPLS 10
PC VCP+S
Sbjct: 53 PCKEVCPVS 61


>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 PCGAVCPLS 10
PCGAV LS
Sbjct: 103 PCGAVGWLS 111


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 1 NPCGAVCP 8
N GAVCP
Sbjct: 35 NILGAVCP 42


>sp|RS8_NATPD|SMALL ribosomal subunit protein uS8|Natronomonas pharaonis (strain ATCC

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NECGAVKP 77


>sp|RS8_HALWD|SMALL ribosomal subunit protein uS8|Haloquadratum walsbyi (strain DSM

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NECGAVKP 77


>sp|RS8_HALLT|SMALL ribosomal subunit protein uS8|Halorubrum lacusprofundi (strain

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NECGAVKP 77


>sp|RS8_META3|SMALL ribosomal subunit protein uS8|Methanococcus aeolicus (strain ATCC

Query: 1 NPCGAVCP 8
N CGAV P
Sbjct: 70 NKCGAVRP 77


>sp|Y1479_METJA|UNCHARACTERIZED aminotransferase MJ1479|Methanocaldococcus jannaschii (strain ATCC

Query: 1 NPCGAVCP 8
NP GAV P
Sbjct: 182 NPTGAVYP 189


>sp|PSTB_METTH|PHOSPHATE import ATP-binding protein PstB|Methanothermobacter

Query: 2 PCGAVCPLS 10
PC A+ P+S
Sbjct: 176 PCSALDPIS 184


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 2 PCGAVCPLS 10
PC A+ P+S
Sbjct: 175 PCSALDPIS 183


>sp|PSTB_METMP|PHOSPHATE import ATP-binding protein PstB|Methanococcus maripaludis (strain

Query: 2 PCGAVCPLS 10
PC A+ P+S
Sbjct: 174 PCSALDPIS 182


>sp|PSTB_METBU|PHOSPHATE import ATP-binding protein PstB|Methanococcoides burtonii (strain

Query: 2 PCGAVCPLS 10
PC A+ P+S
Sbjct: 178 PCSALDPIS 186


>sp|PSTB_METAC|PHOSPHATE import ATP-binding protein PstB|Methanosarcina acetivorans (strain

Query: 2 PCGAVCPLS 10
PC A+ P+S
Sbjct: 181 PCSALDPIS 189


>sp|HDLC_ARCPA|HETERODISULFIDE reductase subunit C-like protein|Archaeoglobus profundus (strain

Query: 3 CGAVCPLS 10
C ++CPL+
Sbjct: 50 CASICPLA 57


>sp|RS8_METMA|SMALL ribosomal subunit protein uS8|Methanosarcina mazei (strain ATCC

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|RS8_METJA|SMALL ribosomal subunit protein uS8|Methanocaldococcus jannaschii

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|RS8_METIG|SMALL ribosomal subunit protein uS8|Methanotorris igneus (Methanococcus

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|RS8_METBU|SMALL ribosomal subunit protein uS8|Methanococcoides burtonii (strain

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|RS8_METBF|SMALL ribosomal subunit protein uS8|Methanosarcina barkeri (strain

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|RS8_METAC|SMALL ribosomal subunit protein uS8|Methanosarcina acetivorans (strain

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|RS8_IGNH4|SMALL ribosomal subunit protein uS8|Ignicoccus hospitalis (strain

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 70 NKCGAIKP 77


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 4 GAVCP 8
GAVCP
Sbjct: 40 GAVCP 44


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GAVCP 8
GAVCP
Sbjct: 40 GAVCP 44


>sp|FPOF_METMA|F(420)H(2) dehydrogenase subunit F|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 CGAVCPL 9
C AVCP+
Sbjct: 20 CEAVCPI 26


>sp|RS8_ARCFU|SMALL ribosomal subunit protein uS8|Archaeoglobus fulgidus (strain ATCC

Query: 1 NPCGAVCP 8
N CGA+ P
Sbjct: 69 NDCGAIRP 76


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 CGAVCPL 9
C AVCP+
Sbjct: 251 CAAVCPI 257


>sp|Y750_METJA|UNCHARACTERIZED protein MJ0750|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CGAVCPL 9
CG +CPL
Sbjct: 64 CGWMCPL 70


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 PCGAVCP 8
PC VCP
Sbjct: 321 PCEKVCP 327


>sp|VHCG_ARCPA|F420-NON-REDUCING hydrogenase iron-sulfur subunit G|Archaeoglobus profundus (strain

Query: 3 CGAVCP 8
CGA+CP
Sbjct: 249 CGALCP 254


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 NPCGAVCP 8
N C VCP
Sbjct: 407 NQCAFVCP 414


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 NPCGAVC 7
N CG++C
Sbjct: 412 NMCGSLC 418


>sp|VHUG_METVO|F420-NON-REDUCING hydrogenase vhu subunit G|Methanococcus voltae

Query: 3 CGAVCP 8
CGA+CP
Sbjct: 223 CGALCP 228


>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 3 CGAVCP 8
CGA CP
Sbjct: 229 CGAECP 234


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 3 CGAVCP 8
CGA CP
Sbjct: 229 CGAECP 234




59|SequenceR|300|291|EKILSNPCGA

>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 2 KILSNPCGA 10
KI+ +PCG
Sbjct: 410 KIIGDPCGG 418


>sp|RASEA_THEKO|ARCHAEOSINE synthase subunit beta|Thermococcus kodakarensis (strain ATCC

Query: 1 EKILSNPCGA 10
++ILS+P GA
Sbjct: 255 KRILSDPVGA 264


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 LSNPCG 9
L+NPCG
Sbjct: 399 LNNPCG 404


>sp|TRM56_METHJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanospirillum hungatei

Query: 2 KILSNPCG 9
++ NPCG
Sbjct: 158 RVFPNPCG 165


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 EKILSNPCG 9
++ L NPCG
Sbjct: 396 KEALENPCG 404


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LSNPCG 9
L NPCG
Sbjct: 402 LENPCG 407


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 4 LSNPCG 9
L NPCG
Sbjct: 404 LENPCG 409


>sp|MFNA_METST|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanosphaera stadtmanae

Query: 4 LSNPCG 9
L NPCG
Sbjct: 80 LKNPCG 85


>sp|RS13_CENSY|SMALL ribosomal subunit protein uS13|Cenarchaeum symbiosum (strain A)

Query: 1 EKILSNPCGA 10
EK+L +P GA
Sbjct: 110 EKLLQDPAGA 119


>sp|KAD6_SULTO|PUTATIVE adenylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EKILSNPC 8
E+ILSN C
Sbjct: 149 EQILSNNC 156


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 EKILSNPCGA 10
EKI S CG+
Sbjct: 7 EKIFSRKCGS 16


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 SNPCG 9
SNPCG
Sbjct: 38 SNPCG 42


>sp|PURS_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurS|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EKILSNP 7
EK+L+NP
Sbjct: 63 EKLLANP 69


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 EKILSNP 7
EKI SNP
Sbjct: 319 EKIASNP 325


>sp|TRPD_METLZ|ANTHRANILATE phosphoribosyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 4 LSNPCGA 10
LSNP GA
Sbjct: 182 LSNPAGA 188


>sp|G1PDH_METS3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanobrevibacter smithii (strain ATCC

Query: 1 EKILSNPC 8
+KIL PC
Sbjct: 255 DKILDKPC 262


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 4 LSNPCG 9
+ NPCG
Sbjct: 118 IGNPCG 123


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 1 EKILSNPCGA 10
EK+ SN C A
Sbjct: 154 EKMQSNTCDA 163




60|SequenceR|305|296|RFHHLEKILS

>sp|TRPB2_METAC|TRYPTOPHAN synthase beta chain 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RFHHLEKIL 9
R H LEK+L
Sbjct: 94 RAHQLEKVL 102


>sp|TRPE_METTM|ANTHRANILATE synthase component 1|Methanothermobacter marburgensis (strain ATCC

Query: 1 RFHHLEKILS 10
RF H++ ILS
Sbjct: 331 RFSHVQHILS 340


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 1 RFHHLEKI 8
R HHL KI
Sbjct: 337 RIHHLNKI 344


>sp|TRPE_METTH|ANTHRANILATE synthase component 1|Methanothermobacter thermautotrophicus (strain

Query: 1 RFHHLEKILS 10
RF H++ ILS
Sbjct: 329 RFSHVQHILS 338


>sp|1A1D_PYRFU|PUTATIVE 1-aminocyclopropane-1-carboxylate deaminase|Pyrococcus furiosus

Query: 2 FHHLEKILS 10
FH+ +KILS
Sbjct: 319 FHYGDKILS 327


>sp|COBS_METTH|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanothermobacter thermautotrophicus

Query: 2 FHHLEKIL 9
FHHL+ ++
Sbjct: 76 FHHLDGLI 83


>sp|PELO_PYRAB|PROTEIN pelota homolog|Pyrococcus abyssi (strain GE5 /

Query: 1 RFHHLEKI 8
R HH+E+I
Sbjct: 117 RSHHVERI 124


>sp|COBS_SULAC|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FHHLEKIL 9
FHHL+ +L
Sbjct: 76 FHHLDGLL 83




61|SequenceR|310|301|EEGLIRFHHL

>sp|FEN_PYRAB|FLAP endonuclease 1|Pyrococcus abyssi (strain GE5 /

Query: 1 EEGLIRF 7
EEG+IRF
Sbjct: 297 EEGIIRF 303


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 IRFHHL 10
IRFHH+
Sbjct: 230 IRFHHM 235


>sp|DTDA_METTP|D-AMINOACYL-TRNA deacylase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EEGLIRFH 8
EEG +RFH
Sbjct: 30 EEGTLRFH 37


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEGLIRFHH 9
EEGL+ F H
Sbjct: 594 EEGLVSFVH 602


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 1 EEGLIRFHHL 10
EEGL+ H L
Sbjct: 200 EEGLVTLHDL 209


>sp|FEN_THEON|FLAP endonuclease 1|Thermococcus onnurineus (strain NA1)

Query: 1 EEGLIRF 7
EEG+I+F
Sbjct: 297 EEGIIKF 303


>sp|RTCA_STAMF|RNA 3'-terminal phosphate cyclase|Staphylothermus marinus (strain ATCC

Query: 1 EEGLIRFH 8
E+G+IR H
Sbjct: 344 EKGIIRIH 351


>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 EEGLIRFHH 9
E+G +RF H
Sbjct: 797 EDGDVRFDH 805


>sp|ATGT_SACS2|TRNA-GUANINE(15) transglycosylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EGLIRFHHL 10
EGL +F H+
Sbjct: 179 EGLSKFEHI 187


>sp|GUAAB_NATPD|GMP synthase [glutamine-hydrolyzing] subunit B|Natronomonas pharaonis

Query: 2 EGLIRFHH 9
EG I+ HH
Sbjct: 136 EGTIKSHH 143


>sp|COBQ_METAC|PROBABLE cobyric acid synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EGLIRFHHL 10
EGL++ H++
Sbjct: 271 EGLVKVHYV 279


>sp|DUT_HALSA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 EGLIRFHH 9
EGL HH
Sbjct: 119 EGLFEVHH 126


>sp|DUT_HALS3|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 EGLIRFHH 9
EGL HH
Sbjct: 119 EGLFEVHH 126




62|SequenceR|315|306|YRNYQEEGLI

>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 1 YRNYQEEGLI 10
+R Y+EEGL+
Sbjct: 78 FREYEEEGLL 87


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YRNYQEEGLI 10
YRN Q+EG I
Sbjct: 494 YRNLQKEGFI 503


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 YRNYQEEGLI 10
+ N+QE GLI
Sbjct: 211 FANFQENGLI 220


>sp|Y1590_THEKO|UPF0273 protein TK1590|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RNYQEEGL 9
R Y+EEGL
Sbjct: 78 RKYEEEGL 85


>sp|Y1931_PYRFU|UPF0273 protein PF1931|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RNYQEEGL 9
R Y+EEGL
Sbjct: 78 RKYEEEGL 85


>sp|IPK_METTH|ISOPENTENYL phosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 2 RNYQEEGLI 10
R+Y EEG++
Sbjct: 127 RSYLEEGMV 135


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 1 YRNYQEEGLI 10
YRN ++GLI
Sbjct: 274 YRNLGDDGLI 283


>sp|Y258_PYRAB|UPF0273 protein PYRAB02580|Pyrococcus abyssi (strain GE5 /

Query: 2 RNYQEEGL 9
R Y+EEG+
Sbjct: 78 RKYEEEGM 85


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 YRNYQEEGLI 10
YR EEGL+
Sbjct: 296 YRRMIEEGLV 305


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YRNYQEEGL 9
Y+NY E+ L
Sbjct: 902 YKNYMEKAL 910


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YRNYQEEGLI 10
YR Q+EG I
Sbjct: 496 YRTLQKEGFI 505


>sp|HPPA1_METAC|PUTATIVE K(+)-stimulated pyrophosphate-energized sodium

Query: 1 YRNYQEEG 8
Y+N Q EG
Sbjct: 23 YKNVQNEG 30


>sp|GLCD2_CALMQ|GLUCOSE 1-dehydrogenase 2|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 YRNYQEEGL 9
Y NY ++GL
Sbjct: 231 YYNYSKDGL 239


>sp|TRM1_PYRAE|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum aerophilum

Query: 1 YRNYQEEGLI 10
+R +EEGLI
Sbjct: 142 FRALKEEGLI 151


>sp|ENDA_ARCFU|TRNA-SPLICING endonuclease|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YRNYQEEGLI 10
YRN +E G +
Sbjct: 223 YRNLKERGFV 232


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus

Query: 2 RNYQEEGL 9
R Y+EEG+
Sbjct: 37 RRYEEEGI 44


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 1 YRNYQEEGLI 10
Y N Q EG+I
Sbjct: 631 YENEQPEGVI 640


>sp|RPO2C_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 YRNYQEEGLI 10
YR+ E+G+I
Sbjct: 273 YRHLDEDGII 282


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 YRNYQEEGLI 10
YR+ E+G+I
Sbjct: 790 YRHLDEDGII 799


>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter thermautotrophicus

Query: 1 YRNYQEEGLI 10
YR+ E+G+I
Sbjct: 273 YRHLDEDGII 282


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 YRNYQEE 7
Y NY EE
Sbjct: 71 YENYHEE 77




63|SequenceR|320|311|AGYQQYRNYQ

>sp|MRE11_HALSA|DNA double-strand break repair protein|Halobacterium salinarum

Query: 2 GYQQYRNYQ 10
GYQQY Q
Sbjct: 13 GYQQYHAPQ 21


>sp|MRE11_HALVD|DNA double-strand break repair protein|Haloferax volcanii (strain

Query: 2 GYQQYRN 8
GYQQY +
Sbjct: 13 GYQQYHS 19


>sp|Y1487_METJA|UNCHARACTERIZED methyltransferase MJ1487|Methanocaldococcus jannaschii (strain

Query: 1 AGYQQYRN 8
A YQ YRN
Sbjct: 81 AKYQSYRN 88


>sp|SYFB_KORCO|PHENYLALANINE--TRNA ligase beta subunit|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GYQQYRNY 9
GYQ+ NY
Sbjct: 379 GYQEVLNY 386


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 YQQYRNY 9
Y++Y+NY
Sbjct: 381 YKEYKNY 387


>sp|TRPB1_METAC|TRYPTOPHAN synthase beta chain 1|Methanosarcina acetivorans (strain ATCC

Query: 2 GYQQYRN 8
GY++Y+N
Sbjct: 37 GYEKYKN 43


>sp|TRM1_PYRCJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrobaculum calidifontis

Query: 2 GYQQYRNYQ 10
GY +YR Y+
Sbjct: 242 GYVEYRRYR 250




64|SequenceR|325|316|LVCEEAGYQQ

>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VCEEAGY 8
VC EAGY
Sbjct: 347 VCTEAGY 353


>sp|Y653_METJA|UNCHARACTERIZED protein MJ0653|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VCEEAGYQ 9
+CE GYQ
Sbjct: 163 ICENCGYQ 170


>sp|G1PDH_METKA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanopyrus kandleri (strain AV19 /

Query: 4 EEAGYQ 9
EEAGYQ
Sbjct: 59 EEAGYQ 64


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 2 VCEEAGY 8
V EEAGY
Sbjct: 314 VLEEAGY 320


>sp|BSUHB_METJA|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE jannaschii (strain ATCC 43067

Query: 1 LVCEEAG 7
++C+EAG
Sbjct: 207 IICKEAG 213


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC 51178

Query: 2 VCEEAGY 8
VC++ GY
Sbjct: 1060 VCDQCGY 1066


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 2 VCEEAGY 8
VC++ GY
Sbjct: 1060 VCDQCGY 1066




65|SequenceR|330|321|VGGMQLVCEE

>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 GGMQLVCEE 10
GG Q++CEE
Sbjct: 326 GGYQMLCEE 334


>sp|CHEB1_METHJ|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanospirillum

Query: 2 GGMQLVCEE 10
GG+ +VC E
Sbjct: 294 GGVTIVCRE 302


>sp|COBQ_ARCFU|PROBABLE cobyric acid synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GGMQLVCEE 10
GG Q++C E
Sbjct: 322 GGYQIMCRE 330




66|SequenceR|335|326|PRPCLVGGMQ

>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 1 PRPCLVGGM 9
PRP + GM
Sbjct: 38 PRPSTIAGM 46


>sp|Y002_METMP|UPF0425 pyridoxal phosphate-dependent protein MMP0002|Methanococcus

Query: 1 PRPCLVGGMQ 10
PR C + GM+
Sbjct: 117 PRSCKIFGME 126


>sp|CDPAS_METMP|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 PCLVGG 8
PC++GG
Sbjct: 24 PCILGG 29


>sp|CDPAS_METM6|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C6 /

Query: 3 PCLVGG 8
PC++GG
Sbjct: 24 PCILGG 29


>sp|CDPAS_METM5|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C5 /

Query: 3 PCLVGG 8
PC++GG
Sbjct: 24 PCILGG 29


>sp|KHSE_METKA|HOMOSERINE kinase|Methanopyrus kandleri (strain AV19 /

Query: 3 PCLVGG 8
PCL+GG
Sbjct: 138 PCLLGG 143


>sp|KHSE_METAR|HOMOSERINE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 3 PCLVGGM 9
PC++GG+
Sbjct: 136 PCIMGGL 142


>sp|MJK1_METJA|POTASSIUM channel protein 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PCLVGGMQ 10
P +VGGM+
Sbjct: 227 PYIVGGME 234


>sp|CDPAS_METM7|CDP-ARCHAEOL synthase|Methanococcus maripaludis (strain C7 /

Query: 3 PCLVGG 8
PC++GG
Sbjct: 24 PCILGG 29




67|SequenceR|340|331|GAGCGPRPCL

>sp|PURA_PYRHO|ADENYLOSUCCINATE synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_PYRAB|ADENYLOSUCCINATE synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_THEKO|ADENYLOSUCCINATE synthetase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_THEGJ|ADENYLOSUCCINATE synthetase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_PYRFU|ADENYLOSUCCINATE synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_THEON|ADENYLOSUCCINATE synthetase|Thermococcus onnurineus (strain NA1)

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_METJA|ADENYLOSUCCINATE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 134 GSGCGP 139


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AGCGPRP 8
AGC PRP
Sbjct: 3 AGCYPRP 9


>sp|OGT_PYRAE|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GAGCGPRPC 9
GA CG RPC
Sbjct: 118 GALCGDRPC 126


>sp|PURA_METS3|ADENYLOSUCCINATE synthetase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_PYRSS|ADENYLOSUCCINATE synthetase|Pyrococcus sp. (strain ST700)

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|HJC_ARCFU|CROSSOVER junction endodeoxyribonuclease Hjc|Archaeoglobus fulgidus (strain

Query: 1 GAGCGPRPC 9
G+G P PC
Sbjct: 28 GSGVSPFPC 36


>sp|PURA_METST|ADENYLOSUCCINATE synthetase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GAGCGP 6
G+GCGP
Sbjct: 128 GSGCGP 133


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC

Query: 2 AGCGP 6
AGCGP
Sbjct: 64 AGCGP 68


>sp|FOLD_METHJ|BIFUNCTIONAL protein FolD|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 GPRPC 9
GPRPC
Sbjct: 130 GPRPC 134


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|PURA_METMP|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|PURA_METM7|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C7 /

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|PURA_METM5|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C5 /

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|PURA_METVS|ADENYLOSUCCINATE synthetase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|NTPTH_THEPD|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Thermofilum pendens (strain DSM 2475

Query: 1 GAGCGPR 7
GAG GPR
Sbjct: 68 GAGAGPR 74


>sp|PURA_METM6|ADENYLOSUCCINATE synthetase|Methanococcus maripaludis (strain C6 /

Query: 1 GAGCGP 6
G GCGP
Sbjct: 128 GTGCGP 133


>sp|PURA_ARCFU|ADENYLOSUCCINATE synthetase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GAGCGP 6
G GCGP
Sbjct: 125 GTGCGP 130


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 CGPRPCL 10
CG +PC+
Sbjct: 34 CGDQPCV 40


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 CGPRPCL 10
CG +PC+
Sbjct: 34 CGDQPCV 40


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 CGPRPCL 10
CG +PC+
Sbjct: 34 CGDQPCV 40


>sp|THIL_ARCFU|THIAMINE-MONOPHOSPHATE kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 AGCGPRP 8
A CG RP
Sbjct: 78 AACGARP 84


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 CGPRPCL 10
CG +PC+
Sbjct: 34 CGDQPCV 40


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 4 CGPRPC 9
CG +PC
Sbjct: 39 CGDQPC 44


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 CGPRPC 9
CG +PC
Sbjct: 39 CGDQPC 44


>sp|SYA_CALMQ|ALANINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 CGPRPC 9
CG +PC
Sbjct: 41 CGDQPC 46


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 AGCGPRPC 9
A CG PC
Sbjct: 32 ATCGDAPC 39


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 AGCGPRPC 9
A CG PC
Sbjct: 29 ATCGDAPC 36


>sp|Y1363_METJA|UNCHARACTERIZED protein MJ1363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCGPRP 8
GC PRP
Sbjct: 128 GCAPRP 133


>sp|FPOB_METMA|F(420)H(2) dehydrogenase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GCGPRP 8
GC PRP
Sbjct: 155 GCPPRP 160


>sp|WECC_METJA|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CGPRPCL 10
C P PC+
Sbjct: 89 CVPTPCI 95


>sp|PYRK_THEAC|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermoplasma acidophilum

Query: 4 CGPRPCL 10
CGP P L
Sbjct: 170 CGPEPML 176


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 3 GCGPRPCL 10
CGP P L
Sbjct: 173 ACGPEPML 180


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 GAGCGPRP 8
G G PRP
Sbjct: 188 GVGVSPRP 195


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CGPRPCL 10
CG PC+
Sbjct: 38 CGDAPCV 44


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 4 CGPRPCL 10
CG PC+
Sbjct: 38 CGDAPCV 44


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 1 GAGCGPRPC 9
G CG PC
Sbjct: 361 GKACGVVPC 369


>sp|Y738_METTH|UNCHARACTERIZED protein MTH_738|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GAGCGPRPCL 10
G CGP P +
Sbjct: 202 GIICGPTPMM 211


>sp|NEP1_AERPE|RIBOSOMAL RNA small subunit methyltransferase|Aeropyrum pernix (strain ATCC

Query: 1 GAGCGPR 7
G GC PR
Sbjct: 174 GVGCFPR 180


>sp|Y516_METJA|UNCHARACTERIZED protein MJ0516|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCGPRP 8
GC PRP
Sbjct: 116 GCPPRP 121




68|SequenceR|345|336|PEPLLGAGCG

>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PLLGAGC 9
PL+ AGC
Sbjct: 199 PLVNAGC 205


>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 PLLGAGC 9
PL+ AGC
Sbjct: 199 PLVNAGC 205


>sp|WTPC_THEKO|MOLYBDATE/TUNGSTATE import ATP-binding protein WtpC|Thermococcus kodakarensis (strain

Query: 3 PLLGAGCG 10
PL GAG G
Sbjct: 322 PLFGAGAG 329


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 3 PLLGAGCG 10
PLLG G G
Sbjct: 346 PLLGIGIG 353


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 PLLGAGCG 10
PLLG G G
Sbjct: 346 PLLGIGIG 353


>sp|RSMA_SACS2|PROBABLE ribosomal RNA small subunit|Saccharolobus solfataricus (strain

Query: 3 PLLGAGCG 10
P+L GCG
Sbjct: 7 PILEIGCG 14


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 PLLGAGCG 10
PLLG G G
Sbjct: 346 PLLGIGIG 353


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 EPLLGAGCG 10
+PL+ GCG
Sbjct: 640 DPLICTGCG 648


>sp|GSA2_CENSY|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase 2|Cenarchaeum symbiosum (strain A)

Query: 2 EPLLGAG 8
EPLLG G
Sbjct: 206 EPLLGGG 212


>sp|SYH_NATPD|HISTIDINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PEPLLGAGCG 10
P P +G G G
Sbjct: 306 PTPAVGVGIG 315


>sp|Y107_METJA|UNCHARACTERIZED protein MJ0107|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EPLLGAGC 9
EP+ AGC
Sbjct: 309 EPINNAGC 316


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 4 LLGAGC 9
+LGAGC
Sbjct: 9 ILGAGC 14


>sp|PYRDB_METKA|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Methanopyrus kandleri (strain

Query: 3 PLLGAGCG 10
P+LGAG G
Sbjct: 208 PVLGAGVG 215


>sp|Y578_METJA|UNCHARACTERIZED protein MJ0578|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PLLGAGCG 10
P+L GCG
Sbjct: 98 PILCEGCG 105


>sp|HMD_METTM|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 4 LLGAGC 9
+LGAGC
Sbjct: 5 ILGAGC 10


>sp|HMD_METTW|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain

Query: 4 LLGAGC 9
+LGAGC
Sbjct: 5 ILGAGC 10


>sp|IORA_PYRAB|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus abyssi (strain GE5 /

Query: 2 EPLLGAGCG 10
+PL+ GCG
Sbjct: 621 DPLMCWGCG 629


>sp|HMD_METTH|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 LLGAGC 9
+LGAGC
Sbjct: 5 ILGAGC 10


>sp|HMD_METTF|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanothermobacter thermautotrophicus

Query: 4 LLGAGC 9
+LGAGC
Sbjct: 5 ILGAGC 10


>sp|IORA_PYRHO|INDOLEPYRUVATE oxidoreductase subunit IorA|Pyrococcus horikoshii (strain ATCC

Query: 2 EPLLGAGCG 10
+PL+ GCG
Sbjct: 621 DPLMCWGCG 629


>sp|CAPPA_METKA|PHOSPHOENOLPYRUVATE carboxylase|Methanopyrus kandleri (strain AV19 /

Query: 3 PLLGAGC 9
P+LG GC
Sbjct: 237 PILGGGC 243




69|SequenceR|350|341|VKRQDPEPLL

>sp|DPHB_HALMA|DIPHTHINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 QDPEPLL 10
QDPEP+L
Sbjct: 64 QDPEPIL 70


>sp|AMPPA_METJA|AMP phosphorylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DPEPLL 10
DPEPLL
Sbjct: 256 DPEPLL 261


>sp|ALF1_THEKO|FRUCTOSE-BISPHOSPHATE aldolase class 1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KRQDPEPLL 10
+R++PEP++
Sbjct: 250 QRENPEPMI 258


>sp|ALF1_PYRAB|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus abyssi (strain GE5 /

Query: 2 KRQDPEPLL 10
+R++PEP++
Sbjct: 250 QRENPEPMI 258


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 1 VKRQDPEPL 9
V RQDPE L
Sbjct: 746 VFRQDPEDL 754


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VKRQDPE-PLL 10
VKR DPE PLL
Sbjct: 195 VKRLDPEVPLL 205


>sp|ALF1_PYRFU|FRUCTOSE-BISPHOSPHATE aldolase class 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 KRQDPEPLL 10
+R++PEP++
Sbjct: 250 QRENPEPMI 258


>sp|AGLUS_METJA|ARCHAEAL glutamate synthase [NADPH]|Methanocaldococcus jannaschii (strain

Query: 1 VKRQDPE 7
VKR DPE
Sbjct: 445 VKRLDPE 451


>sp|ILVD_NATPD|DIHYDROXY-ACID dehydratase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KRQDPEP 8
+R DPEP
Sbjct: 555 ERDDPEP 561




70|SequenceR|355|346|GGECTVKRQD

>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 GGECTVK 7
GGEC VK
Sbjct: 556 GGECRVK 562


>sp|SYE_NITMS|GLUTAMATE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 CTVKRQD 10
CT KR+D
Sbjct: 195 CTCKRED 201


>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 GGECTV 6
GGEC+V
Sbjct: 483 GGECSV 488


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 GECTVKRQD 10
G C VK+ D
Sbjct: 352 GACAVKKYD 360


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain ATCC

Query: 1 GGECTVKRQD 10
G EC + R D
Sbjct: 401 GNECLIPRGD 410




71|SequenceR|360|351|CGLGNGGECT

>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 253 CGIGKCGHC 261


>sp|SYA_PYRNV|ALANINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GLGNGGEC 9
G GN GEC
Sbjct: 189 GGGNAGEC 196


>sp|SYA_PYRIL|ALANINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GLGNGGEC 9
G GN GEC
Sbjct: 189 GGGNAGEC 196


>sp|SYA_PYRCJ|ALANINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 GLGNGGEC 9
G GN GEC
Sbjct: 194 GGGNAGEC 201


>sp|SYA_PYRAR|ALANINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GLGNGGEC 9
G GN GEC
Sbjct: 189 GGGNAGEC 196


>sp|SYA_PYRAE|ALANINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLGNGGEC 9
G GN GEC
Sbjct: 189 GGGNAGEC 196


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GLGNGGEC 9
G+G GG+C
Sbjct: 199 GIGAGGDC 206


>sp|AGLM_HALVD|UDP-GLUCOSE 6-dehydrogenase AglM|Haloferax volcanii (strain ATCC 29605

Query: 2 GLGNGGEC 9
GLG GG C
Sbjct: 262 GLGWGGSC 269


>sp|HCGF_METMP|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 GLGNGGEC 9
G+GNG C
Sbjct: 108 GIGNGAVC 115


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLGNGGEC 9
G+G GG C
Sbjct: 254 GIGYGGSC 261


>sp|ACKA_METMZ|ACETATE kinase|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 CGLGNGGECT 10
C LGNG T
Sbjct: 207 CHLGNGSSIT 216


>sp|ACKA_METMA|ACETATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CGLGNGGECT 10
C LGNG T
Sbjct: 207 CHLGNGSSIT 216


>sp|ACKA_METTE|ACETATE kinase|Methanosarcina thermophila

Query: 1 CGLGNGGECT 10
C LGNG T
Sbjct: 207 CHLGNGSSIT 216


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 250 CGVGKCGHC 258


>sp|WECC_PYRHO|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GLGNGGEC 9
G+G GG C
Sbjct: 251 GIGVGGHC 258


>sp|AROE_CALMQ|SHIKIMATE dehydrogenase (NADP(+))|Caldivirga maquilingensis (strain ATCC

Query: 1 CGLGNG 6
CGL NG
Sbjct: 156 CGLANG 161


>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 1 CGLGNGG 7
CG GN G
Sbjct: 76 CGTGNNG 82


>sp|ACKA_METAC|ACETATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CGLGNGGECT 10
C LGNG T
Sbjct: 207 CHLGNGSSIT 216


>sp|Y1394_ARCFU|UNCHARACTERIZED protein AF_1394|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CGLGNGGEC 9
CG+G+ G C
Sbjct: 115 CGVGDEGNC 123


>sp|HCGF_METM7|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 GLGNGGEC 9
G+GNG C
Sbjct: 108 GIGNGAIC 115


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 CGLGNGGEC 9
CG+G G+C
Sbjct: 208 CGIGICGQC 216


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 4 GNGGEC 9
GNGG C
Sbjct: 52 GNGGVC 57


>sp|IMDH_KORCO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 GLGNGGECT 10
G+G+G CT
Sbjct: 292 GIGSGSICT 300


>sp|PYRK_PYRFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus furiosus

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 201 CGIGVCGSC 209


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CGLGNG 6
CGLG G
Sbjct: 52 CGLGEG 57


>sp|THIC2_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CGLGNG 6
CGLG G
Sbjct: 52 CGLGEG 57


>sp|GLMM_METBF|PROBABLE phosphoglucosamine mutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CGLGNGGECT 10
CG G GG T
Sbjct: 167 CGCGAGGTIT 176


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi (strain

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 200 CGIGICGSC 208


>sp|PGK_AERPE|PHOSPHOGLYCERATE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LGNGGE 8
+GNGGE
Sbjct: 33 VGNGGE 38


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 2 GLGNGGEC 9
GLG+ G C
Sbjct: 11 GLGHTGRC 18


>sp|RL5_HALLT|LARGE ribosomal subunit protein uL5|Halorubrum lacusprofundi (strain

Query: 2 GLGNGGE 8
G+G GGE
Sbjct: 24 GVGQGGE 30


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 3 LGNGGEC 9
+ NGG+C
Sbjct: 64 IANGGKC 70


>sp|PYRK_THEKO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Thermococcus kodakarensis

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 202 CGIGVCGSC 210


>sp|PYRK_PYRHO|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus horikoshii

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 200 CGIGICGSC 208


>sp|HCGF_METM6|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 2 GLGNGGEC 9
G+GNG C
Sbjct: 108 GVGNGAIC 115


>sp|RL5_METTH|LARGE ribosomal subunit protein uL5|Methanothermobacter

Query: 2 GLGNGGE 8
G+G GGE
Sbjct: 17 GVGEGGE 23


>sp|RL5_METST|LARGE ribosomal subunit protein uL5|Methanosphaera stadtmanae (strain

Query: 2 GLGNGGE 8
G+G GGE
Sbjct: 17 GVGEGGE 23


>sp|HIS8_NATPD|HISTIDINOL-PHOSPHATE aminotransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 LGNGGE 8
LGNGG+
Sbjct: 87 LGNGGD 92


>sp|RL5_NATPD|LARGE ribosomal subunit protein uL5|Natronomonas pharaonis (strain ATCC

Query: 2 GLGNGGE 8
G+G GGE
Sbjct: 26 GVGRGGE 32


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 1 CGLGNGGEC 9
CG+G G C
Sbjct: 202 CGIGVCGSC 210


>sp|APGM_METBU|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GLGNGGECT 10
GLG +CT
Sbjct: 152 GLGANADCT 160




72|SequenceR|365|356|CFAFGCGLGN

>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FAFGCGLGN 10
+ FGCG GN
Sbjct: 529 YQFGCGAGN 537


>sp|Y224_METJA|UNCHARACTERIZED protein MJ0224|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CFAFGCGLG 9
C+AF C L
Sbjct: 35 CYAFDCNLA 43


>sp|RL4_PYRAE|LARGE ribosomal subunit protein uL4|Pyrobaculum aerophilum (strain ATCC

Query: 1 CFAFGCGLG 9
C +FG GLG
Sbjct: 84 CESFGVGLG 92


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 AFGCGLG 9
AFGC LG
Sbjct: 390 AFGCDLG 396


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 AFGCGLG 9
AFGC LG
Sbjct: 390 AFGCDLG 396


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 AFGCGLG 9
AFGC LG
Sbjct: 390 AFGCDLG 396


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 AFGCGLG 9
AFGC LG
Sbjct: 390 AFGCDLG 396


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain

Query: 2 FAFGCGLGN 10
FA GC GN
Sbjct: 39 FAIGCETGN 47


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FAFGCGLGN 10
FAFG G G+
Sbjct: 248 FAFGGGYGS 256


>sp|RSMA_ARCFU|PROBABLE ribosomal RNA small subunit|Archaeoglobus fulgidus (strain ATCC

Query: 5 GCGLGN 10
GCG GN
Sbjct: 37 GCGTGN 42


>sp|DGGGP_METKA|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 CFAFGCGLG 9
CF FG +G
Sbjct: 138 CFLFGAAVG 146


Query: 1 CFAFGCGLG 9
CFA G G+
Sbjct: 87 CFAVGVGMA 95


>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 3 AFGCGLGN 10
A GC LGN
Sbjct: 214 ATGCTLGN 221


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 3 AFGCGLG 9
+FGC LG
Sbjct: 390 SFGCDLG 396


>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 5 GCGLG 9
GCGLG
Sbjct: 16 GCGLG 20


>sp|Y1681_METJA|UNCHARACTERIZED protein MJ1681|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FGCGLGN 10
FGCG+ N
Sbjct: 327 FGCGVCN 333


>sp|DGGGP_PYRHO|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 FGCGLGN 10
FGC GN
Sbjct: 48 FGCSAGN 54


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 CFAFGCGLGN 10
CFA G G N
Sbjct: 265 CFAEGLGAEN 274




73|SequenceR|370|361|EKCERCFAFG

>sp|DP2L_CENSY|DNA polymerase II large subunit|Cenarchaeum symbiosum (strain A)

Query: 1 EKCERC 6
E+CERC
Sbjct: 659 EECERC 664


>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKCERCFAFG 10
E C+R F FG
Sbjct: 109 EICKRNFPFG 118


>sp|DNPH1_METMA|PUTATIVE 2'-deoxynucleoside 5'-phosphate N-hydrolase 1|Methanosarcina

Query: 1 EKCERC 6
E CERC
Sbjct: 5 ESCERC 10


>sp|CSM3_METTH|CRISPR system Cms endoribonuclease Csm3|Methanothermobacter

Query: 2 KCERCFAFG 10
KCE C FG
Sbjct: 78 KCEICRVFG 86


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CERCF 7
CERC+
Sbjct: 292 CERCY 296


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EKCERCFAFG 10
EKC RC G
Sbjct: 206 EKCPRCNGTG 215


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EKCERCFAFG 10
EKC RC G
Sbjct: 206 EKCPRCNGTG 215


>sp|PGP_METMA|PHOSPHOGLYCOLATE phosphatase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EKCERCFAF 9
E+CE+ F+F
Sbjct: 83 EECEKAFSF 91


>sp|PGP_METAC|PHOSPHOGLYCOLATE phosphatase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EKCERCFAF 9
E+CE+ F+F
Sbjct: 83 EECEKAFSF 91


>sp|IF2G_METTH|TRANSLATION initiation factor 2 subunit|Methanothermobacter

Query: 1 EKCERC 6
E CERC
Sbjct: 69 EICERC 74


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EKCERC 6
+KC+RC
Sbjct: 432 KKCDRC 437


>sp|SYM_IGNH4|METHIONINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EKCERC 6
++CERC
Sbjct: 154 DQCERC 159


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 EKCERCF 7
E CE+C+
Sbjct: 87 ENCEKCY 93


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCERCFA 8
KC+RC A
Sbjct: 83 KCDRCGA 89


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 2 KCERC 6
KC+RC
Sbjct: 167 KCQRC 171


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 KCERC 6
KCE+C
Sbjct: 518 KCEKC 522


>sp|SAND_THEX5|S-ADENOSYLMETHIONINE-DEPENDENT nucleotide dehydratase|Thermoplasmatales archaeon (strain

Query: 2 KCERCF 7
+CE CF
Sbjct: 25 RCEHCF 30


>sp|RNP4_PYRAB|RIBONUCLEASE P protein component 4|Pyrococcus abyssi (strain GE5 /

Query: 3 CERCFAF 9
C+RC AF
Sbjct: 64 CKRCHAF 70


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii

Query: 3 CERCFA 8
C+RCF
Sbjct: 31 CDRCFG 36


>sp|PORD_METJA|PYRUVATE synthase subunit PorD|Methanocaldococcus jannaschii (strain ATCC

Query: 2 KCERCFAF 9
KCE C+ F
Sbjct: 36 KCENCYIF 43


>sp|NOP10_THEAC|RIBOSOME biogenesis protein Nop10|Thermoplasma acidophilum (strain ATCC

Query: 2 KCERCFAF 9
KC RC A+
Sbjct: 7 KCPRCHAY 14


>sp|END3_METJA|ENDONUCLEASE III|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KCERCF 7
KC++CF
Sbjct: 189 KCDKCF 194


>sp|CMO_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase cofactor-modifying|Pyrococcus

Query: 2 KCERCF 7
+CE CF
Sbjct: 15 RCEMCF 20




74|SequenceR|375|366|GEHYAEKCER

>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EHYAEKCER 10
E AEKCER
Sbjct: 253 EDVAEKCER 261


>sp|MCH_METMP|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GEHYAEKC 8
+H AEKC
Sbjct: 152 ADHVAEKC 159


>sp|MCH_METM7|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C7 /

Query: 1 GEHYAEKC 8
+H AEKC
Sbjct: 152 ADHVAEKC 159


>sp|MCH_METM5|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus maripaludis (strain C5 /

Query: 1 GEHYAEKC 8
+H AEKC
Sbjct: 152 ADHVAEKC 159


>sp|NDK_METPE|NUCLEOSIDE diphosphate kinase|Methanosphaerula palustris (strain ATCC

Query: 2 EHYAEKCER 10
EHY E ER
Sbjct: 47 EHYREHIER 55


>sp|NDK_METBU|NUCLEOSIDE diphosphate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EHYAEKCER 10
EHY E ER
Sbjct: 47 EHYKEHSER 55


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain ATCC

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|NDK_NATPD|NUCLEOSIDE diphosphate kinase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EHYAEKCER 10
EHYAE ++
Sbjct: 50 EHYAEHVDK 58


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 2 EHYAEKC 8
E+YAE C
Sbjct: 128 ENYAETC 134


>sp|TSR3_METTH|16S rRNA aminocarboxypropyltransferase|Methanothermobacter

Query: 3 HYAEKCER 10
++AE+C+R
Sbjct: 6 YHAEECDR 13


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.16.4

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain M.14.25

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 5 AEKCER 10
+EKCER
Sbjct: 125 SEKCER 130


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 HYAEKCE 9
HY E CE
Sbjct: 202 HYDELCE 208


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 HYAEKCE 9
HY E CE
Sbjct: 202 HYDELCE 208


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GEHYAEKCE 9
G Y E CE
Sbjct: 160 GRKYVESCE 168


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila (strain

Query: 2 EHYAEKCE 9
EH EKC+
Sbjct: 406 EHLLEKCK 413


>sp|HIS6_HALMA|IMIDAZOLE glycerol phosphate synthase subunit|Haloarcula marismortui (strain

Query: 1 GEHYAE 6
GEHY E
Sbjct: 145 GEHYTE 150


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 3 HYAEKCER 10
HY+EK R
Sbjct: 821 HYSEKLRR 828


>sp|FLPA_ARCFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Archaeoglobus fulgidus (strain

Query: 1 GEHYAEK 7
G HY EK
Sbjct: 22 GSHYGEK 28




75|SequenceR|380|371|VASCEGEHYA

>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 SCEGEHYA 10
SC GEH++
Sbjct: 210 SCSGEHFS 217


>sp|Y1311_METJA|UNCHARACTERIZED protein MJ1311|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CEGEHY 9
CEG HY
Sbjct: 50 CEGTHY 55


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 VASCEGEHY 9
V +CE EH+
Sbjct: 195 VCTCENEHF 203


>sp|Y685_PYRNV|UPF0201 protein Tneu_0685|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VASCEG 6
VASCEG
Sbjct: 43 VASCEG 48


>sp|NOB1_METJA|ENDORIBONUCLEASE Nob1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 EGEHY 9
EGEHY
Sbjct: 51 EGEHY 55


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 5 EGEHY 9
EGEHY
Sbjct: 464 EGEHY 468


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 4 CEGEHY 9
CEGE Y
Sbjct: 122 CEGEEY 127


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ASCEGEH 8
ASC+G H
Sbjct: 364 ASCDGGH 370


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 VASCEGEHY 9
+A +GEHY
Sbjct: 3 IALIDGEHY 11


>sp|Y1985_PYRAR|UPF0201 protein Pars_1985|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VASCEG 6
+ASCEG
Sbjct: 43 IASCEG 48


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 VASCEGEHY 9
+A +GEHY
Sbjct: 3 IALIDGEHY 11


>sp|SYA_METS5|ALANINE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 1 VASCEGEHYA 10
V SC G H A
Sbjct: 701 VESCGGTHVA 710


>sp|FEN_HALSA|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 VASCEGEHYA 10
V + EGEH A
Sbjct: 252 VLAAEGEHVA 261


>sp|FEN_HALS3|FLAP endonuclease 1|Halobacterium salinarum (strain ATCC 29341

Query: 1 VASCEGEHYA 10
V + EGEH A
Sbjct: 252 VLAAEGEHVA 261


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VASCEGEH 8
+A C+G H
Sbjct: 395 MAGCDGRH 402


>sp|RL18_METHJ|LARGE ribosomal subunit protein uL18|Methanospirillum hungatei JF-1

Query: 4 CEGEHYA 10
C+GEH A
Sbjct: 143 CKGEHIA 149


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 VASCEGEHY 9
+A +GEHY
Sbjct: 7 LALIDGEHY 15


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain

Query: 1 VASCEGEHY 9
+A +GEHY
Sbjct: 3 LALIDGEHY 11


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VASCEGEH 8
+A C+G H
Sbjct: 391 MAGCDGRH 398


>sp|PURQ_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermococcus kodakarensis (strain ATCC

Query: 1 VASCEGEHYA 10
+A EG +YA
Sbjct: 139 IAHAEGNYYA 148


>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VASCEGEH 8
+A C+G H
Sbjct: 392 MAGCDGRH 399


>sp|CPGS_METKA|CYCLIC 2,3-diphosphoglycerate synthetase|Methanopyrus kandleri (strain

Query: 1 VASCEGEHY 9
+A +GEHY
Sbjct: 8 LALVDGEHY 16




76|SequenceR|385|376|GSAEFVASCE

>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 1 GSAEFVASC 9
G EF+ASC
Sbjct: 112 GEDEFLASC 120


>sp|FLPA_METVO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanococcus voltae

Query: 4 EFVASCE 10
EF+ SCE
Sbjct: 111 EFIESCE 117




77|SequenceR|390|381|AQTTTGSAEF

***** No hits found ******


78|SequenceR|395|386|EDVRYAQTTT

>sp|URED_HALWD|UREASE accessory protein UreD|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EDVRYAQTTT 10
ED R QTTT
Sbjct: 147 EDARCLQTTT 156


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 2 DVRYAQTT 9
D+RY +TT
Sbjct: 155 DLRYGRTT 162


>sp|METXA_METRM|HOMOSERINE O-acetyltransferase|Methanobrevibacter ruminantium (strain ATCC

Query: 1 EDVRYAQTT 9
+DVRY ++T
Sbjct: 439 KDVRYCKST 447




79|SequenceR|400|391|QEAAREDVRY

>sp|WTPA_PYRFU|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus furiosus (strain ATCC 43587

Query: 4 AREDVRY 10
AREDVR+
Sbjct: 146 AREDVRF 152


>sp|TRM1_METBF|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosarcina barkeri

Query: 1 QEAAREDVRY 10
+E RE+VRY
Sbjct: 59 KELLREEVRY 68


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 QEAAREDVR 9
QEAARE V+
Sbjct: 96 QEAAREIVK 104


>sp|Y4320_HALS3|UPF0148 protein OE_4320R|Halobacterium salinarum (strain ATCC 29341

Query: 1 QEAAREDVR 9
+EAARE++R
Sbjct: 10 KEAAREELR 18


>sp|Y2366_HALSA|UPF0148 protein VNG_2366C|Halobacterium salinarum (strain ATCC 700922

Query: 1 QEAAREDVR 9
+EAARE++R
Sbjct: 10 KEAAREELR 18


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 2 EAAREDVRY 10
E ARE+V Y
Sbjct: 236 EKARENVHY 244




80|SequenceR|405|396|AEWRAQEAAR

>sp|CDC6_PYRAB|ORC1-TYPE DNA replication protein|Pyrococcus abyssi (strain GE5 /

Query: 3 WRAQE 7
WRAQE
Sbjct: 289 WRAQE 293


>sp|HEM11_PYRCJ|GLUTAMYL-TRNA reductase 1|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AEWRAQEAAR 10
AE+R EAAR
Sbjct: 73 AEFRGVEAAR 82


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 1 AEWRAQEAA 9
++WR+QE A
Sbjct: 454 SQWRSQEDA 462


>sp|ARLY_METMJ|ARGININOSUCCINATE lyase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 WRAQEAAR 10
WR EAAR
Sbjct: 331 WRGVEAAR 338


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 AEWRAQ 6
A+WRAQ
Sbjct: 374 ADWRAQ 379




81|SequenceR|410|401|TEKSAAEWRA

>sp|CBID_PICTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 4 SAAEWRA 10
SAA WRA
Sbjct: 177 SAASWRA 183


>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 TEKSAAEW 8
+E SAAEW
Sbjct: 37 SELSAAEW 44


>sp|DAPAT_METTH|LL-DIAMINOPIMELATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 TEKSAAEW 8
TEK AEW
Sbjct: 194 TEKQLAEW 201


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 4 SAAEWR 9
+AAEWR
Sbjct: 198 AAAEWR 203


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 EKSAAEWRA 10
E SAA WR
Sbjct: 199 ETSAAYWRG 207


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 EKSAAEWRA 10
E SAA WR
Sbjct: 199 ETSAAYWRG 207




82|SequenceR|415|406|TTKKITEKSA

***** No hits found ******


83|SequenceR|420|411|RPCPKTTKKI

>sp|Y414_METJA|UNCHARACTERIZED protein MJ0414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CPKTTKKI 10
CP TTKK+
Sbjct: 125 CPFTTKKV 132


>sp|RNZ_PYRAE|RIBONUCLEASE Z|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PCPKTTKKI 10
PCP+ KK+
Sbjct: 194 PCPEMWKKV 202


>sp|WECC_META3|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 PKTTKKI 10
PKTT+KI
Sbjct: 134 PKTTEKI 140


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 PKTTKKI 10
PK TKKI
Sbjct: 874 PKKTKKI 880


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 4 PKTTKKI 10
P+TTKKI
Sbjct: 133 PETTKKI 139


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 PKTTKKI 10
P+TTKKI
Sbjct: 133 PETTKKI 139


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 2 PCPKTTKKI 10
P PK KKI
Sbjct: 419 PFPKNRKKI 427




84|SequenceR|425|416|VPVHCRPCPK

>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 HCRPCP 9
+C+PCP
Sbjct: 204 NCKPCP 209


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 HCRPCP 9
+C+PCP
Sbjct: 205 NCQPCP 210


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPVHCRPCP 9
+PV+C P
Sbjct: 223 IPVYCNTSP 231


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 2 PVHCRP 7
P+ CRP
Sbjct: 395 PIDCRP 400


>sp|QUEC_METKA|7-CYANO-7-DEAZAGUANINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 PVHCRPC 8
PVHC C
Sbjct: 200 PVHCGEC 206


>sp|DMRX_METMA|DIHYDROMETHANOPTERIN reductase (acceptor)|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 HCRPCP 9
HC CP
Sbjct: 155 HCETCP 160


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 PVHCRPC 8
P++CR C
Sbjct: 594 PLYCRGC 600




85|SequenceR|430|421|GGNKEVPVHC

>sp|T1MH_METJA|TYPE I restriction enzyme MjaIX|Methanocaldococcus jannaschii (strain

Query: 2 GNKEVPV 8
GNK+VPV
Sbjct: 350 GNKKVPV 356


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 GNKEVPVHC 10
G+K V VHC
Sbjct: 196 GDKIVSVHC 204


>sp|TCPA_THEAD|NAD(+) hydrolase TcpA|Theionarchaea archaeon (strain DG-70-1)

Query: 3 NKEVPVH 9
+KEVP+H
Sbjct: 136 HKEVPIH 142


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 GGNKEVPVHC 10
GGN E HC
Sbjct: 79 GGNPEEICHC 88


>sp|Y1055_METJA|UNCHARACTERIZED protein MJ1055|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GGNKEVP 7
GGN+++P
Sbjct: 137 GGNRKIP 143


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 GNKEVPV 8
G+KEVP+
Sbjct: 147 GSKEVPI 153


>sp|FTSY_METAC|SIGNAL recognition particle receptor FtsY|Methanosarcina acetivorans

Query: 3 NKEVPVH 9
N+E PVH
Sbjct: 217 NREKPVH 223


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 NKEVPVH 9
NKEVP++
Sbjct: 324 NKEVPLY 330


>sp|FLA1_THEVO|FLAGELLIN B1|Thermoplasma volcanium (strain ATCC 51530

Query: 3 NKEVPVH 9
NK VP H
Sbjct: 81 NKSVPTH 87


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GNKEVPV 8
GN E+P+
Sbjct: 74 GNNEIPI 80


>sp|Y315_THEKO|UPF0248 protein TK0315|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GGNKEVPV 8
GG K++PV
Sbjct: 35 GGEKKIPV 42


>sp|FOR_THELN|TUNGSTEN-CONTAINING formaldehyde ferredoxin oxidoreductase|Thermococcus litoralis

Query: 2 GNKEVPV 8
G KE+PV
Sbjct: 203 GTKEIPV 209


>sp|HIS2_METAR|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GGNKEVPVHC 10
GG KE+ C
Sbjct: 56 GGEKEIVSEC 65




86|SequenceR|435|426|KMHMCGGNKE

>sp|AMT1_HALMT|AMMONIUM transporter Amt1|Haloferax mediterranei (strain ATCC 33500

Query: 2 MHMCGG 7
+HMCGG
Sbjct: 178 VHMCGG 183


>sp|END4_HALSA|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 700922

Query: 3 HMCGGNKE 10
H CG NK+
Sbjct: 215 HACGTNKD 222


>sp|END4_HALS3|PROBABLE endonuclease 4|Halobacterium salinarum (strain ATCC 29341

Query: 3 HMCGGNKE 10
H CG NK+
Sbjct: 215 HACGTNKD 222


>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 3 HMCGGNKE 10
H CG NK+
Sbjct: 215 HACGTNKD 222


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 4 MCGGNKE 10
+CGG KE
Sbjct: 194 ICGGKKE 200


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KMHMCGGN 8
K H+CG N
Sbjct: 447 KCHVCGEN 454


>sp|Y1650_METJA|UNCHARACTERIZED protein MJ1650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HMCGGNK 9
HMCG K
Sbjct: 59 HMCGSYK 65


>sp|END4_HALMA|PROBABLE endonuclease 4|Haloarcula marismortui (strain ATCC 43049

Query: 3 HMCGGNKE 10
H CG NK+
Sbjct: 216 HECGTNKD 223


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 3 HMCGGNKE 10
H CG NK+
Sbjct: 216 HDCGTNKD 223




87|SequenceR|440|431|QPQPCKMHMC

>sp|DCDB_METKA|DCTP deaminase, dUMP-forming|Methanopyrus kandleri (strain AV19 /

Query: 1 QPQPCKMHM 9
+P P KMH+
Sbjct: 180 RPSPSKMHL 188


>sp|SYC_SULTO|CYSTEINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QPQPCKMHMC 10
+PQ KM++C
Sbjct: 20 EPQTVKMYVC 29


>sp|RTCA_METMA|RNA 3'-terminal phosphate cyclase|Methanosarcina mazei (strain ATCC

Query: 3 QPCKMH 8
+PCK+H
Sbjct: 169 EPCKLH 174




88|SequenceR|445|436|WELRCQPQPC

>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 CQPQPC 10
CQP PC
Sbjct: 264 CQPLPC 269


>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 CQPQPC 10
CQP PC
Sbjct: 206 CQPCPC 211


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 CQPQPC 10
C+P PC
Sbjct: 205 CKPCPC 210


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 1 WELRCQ 6
WE RC+
Sbjct: 130 WECRCR 135


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 1 WELRCQ 6
WE RC+
Sbjct: 131 WECRCR 136


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 1 WELRCQ 6
WE RC+
Sbjct: 131 WECRCR 136


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 1 WELRCQ 6
WE RC+
Sbjct: 131 WECRCR 136


>sp|Y1492_METVS|UPF0251 protein Mevan_1492|Methanococcus vannielii (strain ATCC 35089

Query: 2 ELRCQPQPC 10
E CQ PC
Sbjct: 105 EQECQGMPC 113




89|SequenceR|450|441|GCNWCWELRC

>sp|SYP_METST|PROLINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CNWCWELRC 10
C+WC E C
Sbjct: 419 CSWCGETDC 427


>sp|UPPS_ARCFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Archaeoglobus

Query: 4 WCWEL 8
WCW+L
Sbjct: 59 WCWDL 63


>sp|SYD_PYRAE|ASPARTATE--TRNA(ASP) ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 WCWELR 9
W WELR
Sbjct: 26 WVWELR 31


>sp|MSRA_PICTO|PEPTIDE methionine sulfoxide reductase MsrA|Picrophilus torridus (strain

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 10 GCFWCME 16


>sp|COFG_METM7|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C7 /

Query: 2 CNWC 5
CNWC
Sbjct: 46 CNWC 49


>sp|COFG_METM6|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C6 /

Query: 2 CNWC 5
CNWC
Sbjct: 46 CNWC 49


>sp|COFG_META3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CNWC 5
CNWC
Sbjct: 51 CNWC 54


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 9 GCFWCTE 15


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 9 GCFWCTE 15


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 10 GCFWCTE 16


>sp|MSRA_HALSA|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 11 GCFWCTE 17


>sp|MSRA_HALS3|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 11 GCFWCTE 17


>sp|COFG_METM5|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain C5 /

Query: 2 CNWC 5
CNWC
Sbjct: 46 CNWC 49


>sp|COFG_METVS|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 CNWC 5
CNWC
Sbjct: 46 CNWC 49


>sp|COFG_METMP|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcus maripaludis (strain DSM 14266

Query: 2 CNWC 5
CNWC
Sbjct: 24 CNWC 27


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 1 GCNWCWE 7
GC WC E
Sbjct: 10 GCFWCVE 16


>sp|HDRA_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina mazei (strain

Query: 2 CNWC 5
CNWC
Sbjct: 656 CNWC 659


>sp|HDRA2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 2 CNWC 5
CNWC
Sbjct: 656 CNWC 659


>sp|CBIT_THEAC|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 GCNWCWELR 9
G NW +E+R
Sbjct: 5 GENWVYEVR 13


>sp|Y114_METTH|UNCHARACTERIZED protein MTH_114|Methanothermobacter thermautotrophicus (strain

Query: 2 CNWCW 6
C++CW
Sbjct: 17 CSYCW 21


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 NWCWE 7
NW WE
Sbjct: 316 NWIWE 320


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CNWCWEL 8
CN+C EL
Sbjct: 693 CNFCGEL 699


>sp|MVHD_METTM|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 CNWC 5
CNWC
Sbjct: 13 CNWC 16


>sp|MVHD_METTH|F420-NON-REDUCING hydrogenase iron-sulfur subunit D|Methanothermobacter

Query: 2 CNWC 5
CNWC
Sbjct: 13 CNWC 16


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CNWCWE 7
C WC E
Sbjct: 195 CKWCEE 200


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 CNWCW 6
C +CW
Sbjct: 69 CEYCW 73


>sp|Y274_METJA|UNCHARACTERIZED protein MJ0274|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GCNWCWELR 9
GC++C E R
Sbjct: 224 GCSFCTEPR 232


>sp|HYPA_THEKO|HYDROGENASE maturation factor HypA|Thermococcus kodakarensis (strain ATCC

Query: 2 CNWCWELR 9
CN+ W+L+
Sbjct: 76 CNYEWKLK 83


>sp|LIPA_SACS2|LIPOYL synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GCNWCWELR 9
GC +C+ L+
Sbjct: 60 GCRFCYVLK 68


>sp|ISF2_METJA|IRON-SULFUR flavoprotein MJ1083|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GCNWCWE 7
GCN C E
Sbjct: 49 GCNMCKE 55


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CNWCWEL 8
CN+C EL
Sbjct: 317 CNFCKEL 323


>sp|MVHB_METFE|POLYFERREDOXIN protein MvhB|Methanothermus fervidus

Query: 1 GCNWCWEL 8
GCN C E+
Sbjct: 218 GCNTCVEI 225


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 NWCWELRC 10
+WC E C
Sbjct: 425 HWCGEKAC 432


>sp|VHCD_METVO|F420-NON-REDUCING hydrogenase vhc iron-sulfur subunit|Methanococcus voltae

Query: 2 CNWC 5
CNWC
Sbjct: 14 CNWC 17




90|SequenceR|455|446|RNWECGCNWC

>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 2 NWECGCNW 9
+WECGC +
Sbjct: 130 SWECGCGY 137


>sp|RS5_METHJ|SMALL ribosomal subunit protein uS5|Methanospirillum hungatei JF-1

Query: 2 NWECGCN 8
+WECGC+
Sbjct: 118 SWECGCS 124


>sp|RS5_THEVO|SMALL ribosomal subunit protein uS5|Thermoplasma volcanium (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 115 SWECGC 120


>sp|RS5_THEAC|SMALL ribosomal subunit protein uS5|Thermoplasma acidophilum (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 115 SWECGC 120


>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 115 SWECGC 120


>sp|RS5_METTP|SMALL ribosomal subunit protein uS5|Methanothrix thermoacetophila (strain

Query: 2 NWECGC 7
+WECGC
Sbjct: 120 SWECGC 125


>sp|RS5_METMJ|SMALL ribosomal subunit protein uS5|Methanoculleus marisnigri (strain

Query: 2 NWECGC 7
+WECGC
Sbjct: 118 SWECGC 123


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 2 NWECGC 7
+WECGC
Sbjct: 118 SWECGC 123


>sp|RS5_METBU|SMALL ribosomal subunit protein uS5|Methanococcoides burtonii (strain DSM

Query: 2 NWECGC 7
+WECGC
Sbjct: 119 SWECGC 124


>sp|RS5_METB6|SMALL ribosomal subunit protein uS5|Methanoregula boonei (strain DSM

Query: 2 NWECGC 7
+WECGC
Sbjct: 118 SWECGC 123


>sp|RS5_METAR|SMALL ribosomal subunit protein uS5|Methanocella arvoryzae (strain DSM

Query: 2 NWECGC 7
+WECGC
Sbjct: 122 SWECGC 127


>sp|RS5_META3|SMALL ribosomal subunit protein uS5|Methanococcus aeolicus (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 123 SWECGC 128


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 115 SWECGC 120


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 2 NWECGC 7
+WECGC
Sbjct: 130 SWECGC 135


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 2 NWECGC 7
+WECGC
Sbjct: 130 SWECGC 135


>sp|RS5_METLZ|SMALL ribosomal subunit protein uS5|Methanocorpusculum labreanum (strain

Query: 2 NWECGC 7
+WECGC
Sbjct: 118 SWECGC 123


>sp|RS5_HALSA|SMALL ribosomal subunit protein uS5|Halobacterium salinarum (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 117 SWECGC 122


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 2 NWECGC 7
+WECGC
Sbjct: 126 SWECGC 131


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 126 SWECGC 131


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 2 NWECGC 7
+WECGC
Sbjct: 126 SWECGC 131


>sp|RS5_HALMA|SMALL ribosomal subunit protein uS5|Haloarcula marismortui (strain ATCC

Query: 2 NWECGC 7
+WECGC
Sbjct: 117 SWECGC 122


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 2 NWECGC 7
+WECGC
Sbjct: 120 SWECGC 125


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii

Query: 2 NWECGCN 8
NW+ GCN
Sbjct: 27 NWDYGCN 33


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 NWECGC 7
+WEC C
Sbjct: 130 SWECAC 135


>sp|RS5_METMA|SMALL ribosomal subunit protein uS5|Methanosarcina mazei (strain ATCC

Query: 2 NWECGC 7
+WEC C
Sbjct: 117 SWECAC 122


>sp|RS5_METBF|SMALL ribosomal subunit protein uS5|Methanosarcina barkeri (strain Fusaro

Query: 2 NWECGC 7
+WEC C
Sbjct: 117 SWECAC 122


>sp|RS5_METAC|SMALL ribosomal subunit protein uS5|Methanosarcina acetivorans (strain

Query: 2 NWECGC 7
+WEC C
Sbjct: 117 SWECAC 122


>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 2 NWECGCN 8
+WEC C+
Sbjct: 137 SWECRCD 143


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 2 NWECGC 7
+WEC C
Sbjct: 123 SWECTC 128


>sp|RS5_SULAC|SMALL ribosomal subunit protein uS5|Sulfolobus acidocaldarius (strain

Query: 2 NWECGC 7
+WEC C
Sbjct: 123 SWECTC 128


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 2 NWECGC 7
+WEC C
Sbjct: 123 SWECTC 128


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 2 NWECGC 7
+WEC C
Sbjct: 124 SWECTC 129


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 2 NWECGC 7
+WEC C
Sbjct: 120 SWECTC 125


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus

Query: 2 NWECG 6
NW+CG
Sbjct: 61 NWKCG 65


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 2 NWECGC 7
+WEC C
Sbjct: 129 SWECRC 134


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 2 NWECGC 7
+WEC C
Sbjct: 124 SWECRC 129


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 2 NWECGC 7
+WEC C
Sbjct: 130 SWECRC 135


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 2 NWECGC 7
+WEC C
Sbjct: 130 SWECRC 135


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 2 NWECGC 7
+WEC C
Sbjct: 130 SWECRC 135


>sp|PURP_METS3|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanobrevibacter smithii (strain ATCC

Query: 6 GCNWC 10
GCN+C
Sbjct: 206 GCNYC 210


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 CGCNWC 10
CG WC
Sbjct: 212 CGYGWC 217


>sp|TRM56_THEAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma acidophilum

Query: 6 GCNW 9
GCNW
Sbjct: 62 GCNW 65


>sp|MSRA_SULAC|PEPTIDE methionine sulfoxide reductase MsrA|Sulfolobus acidocaldarius

Query: 6 GCNWC 10
GC WC
Sbjct: 9 GCFWC 13


>sp|MSRA_SACS2|PEPTIDE methionine sulfoxide reductase MsrA|Saccharolobus solfataricus

Query: 6 GCNWC 10
GC WC
Sbjct: 9 GCFWC 13


>sp|MSRA_NATPD|PEPTIDE methionine sulfoxide reductase MsrA|Natronomonas pharaonis

Query: 6 GCNWC 10
GC WC
Sbjct: 10 GCFWC 14


>sp|MSRA_HALWD|PEPTIDE methionine sulfoxide reductase MsrA|Haloquadratum walsbyi (strain

Query: 6 GCNWC 10
GC WC
Sbjct: 10 GCFWC 14


>sp|MSRA_HALSA|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 6 GCNWC 10
GC WC
Sbjct: 11 GCFWC 15


>sp|MSRA_HALS3|PEPTIDE methionine sulfoxide reductase MsrA|Halobacterium salinarum

Query: 6 GCNWC 10
GC WC
Sbjct: 11 GCFWC 15


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 2 NWECGCN 8
+WEC C+
Sbjct: 123 SWECLCS 129


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 2 NWECGCN 8
+W+C C+
Sbjct: 119 SWKCSCD 125


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 2 NWECGCN 8
+W+C C+
Sbjct: 119 SWKCSCD 125


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 2 NWECGCN 8
+W+C C+
Sbjct: 119 SWKCSCD 125


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 2 NWECGCN 8
+W+C C+
Sbjct: 135 SWKCSCD 141


>sp|MSRA_PICTO|PEPTIDE methionine sulfoxide reductase MsrA|Picrophilus torridus (strain

Query: 6 GCNWC 10
GC WC
Sbjct: 10 GCFWC 14


>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 NWEC 5
NWEC
Sbjct: 185 NWEC 188


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 WECG 6
WECG
Sbjct: 407 WECG 410


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 WECG 6
WECG
Sbjct: 407 WECG 410


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 2 NWECGC 7
+WEC C
Sbjct: 115 SWECLC 120


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 6 GCNWC 10
GCN+C
Sbjct: 69 GCNFC 73


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 6 GCNWC 10
GCN+C
Sbjct: 69 GCNFC 73


>sp|LIPA_HALLT|LIPOYL synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 6 GCNWC 10
GCN+C
Sbjct: 70 GCNFC 74


>sp|GLMM_METAR|PROBABLE phosphoglucosamine mutase|Methanocella arvoryzae (strain DSM

Query: 1 RNWECG 6
RN++CG
Sbjct: 80 RNYDCG 85


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 4 ECGCN 8
ECGC+
Sbjct: 67 ECGCD 71


>sp|LIPA_NATPD|LIPOYL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 6 GCNWC 10
GCN+C
Sbjct: 70 GCNFC 74


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 2 NWECGC 7
+W+C C
Sbjct: 123 SWQCTC 128


>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 2 NWECGC 7
+W+C C
Sbjct: 123 SWQCTC 128


>sp|PURP_METST|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosphaera stadtmanae (strain ATCC

Query: 5 CGCNWC 10
CG N+C
Sbjct: 205 CGTNFC 210


>sp|Y103_METJA|UNCHARACTERIZED protein MJ0103|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CGCN 8
CGCN
Sbjct: 116 CGCN 119


>sp|HMD_METVS|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 4 ECGCN 8
ECGC+
Sbjct: 347 ECGCS 351


>sp|HMD_METMP|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 4 ECGCN 8
ECGC+
Sbjct: 347 ECGCS 351


>sp|FDHC_METTF|PROBABLE formate transporter|Methanothermobacter thermautotrophicus

Query: 6 GCNW 9
GCNW
Sbjct: 182 GCNW 185


>sp|FDHC_METFO|PROBABLE formate transporter|Methanobacterium formicicum

Query: 6 GCNW 9
GCNW
Sbjct: 182 GCNW 185


>sp|Y674_METJA|UNCHARACTERIZED protein MJ0674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 CGCNW 9
CGCN+
Sbjct: 127 CGCNF 131


>sp|Y3523_METJA|UNCHARACTERIZED protein MJECL23|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WECGCNWC 10
WE WC
Sbjct: 204 WEFEAEWC 211




91|SequenceR|465|451|VDFWHDGMCVRNWEC

>sp|RNP3_HALS3|RIBONUCLEASE P protein component 3|Halobacterium salinarum (strain ATCC 29341

Query: 5 HDGMCVRNW 13
+DG+ VRNW
Sbjct: 27 YDGIVVRNW 35


>sp|MCH_METKA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 DFWHDGMCV 10
+F HDG+C+
Sbjct: 67 EFEHDGLCL 75


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 4 WHDGMCVRNW 13
WH + V++W
Sbjct: 21 WHPSILVKDW 30


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDFWHDGMCVR 11
+ FW +G C++
Sbjct: 218 IGFWREGCCLQ 228


>sp|G3PP_METJA|GLYCERALDEHYDE 3-phosphate phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 6 DGMCVRNWE 14
DG+ ++ WE
Sbjct: 118 DGLTIKQWE 126


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VDFWHD 6
VDFW+D
Sbjct: 102 VDFWND 107


>sp|Y1332_METJA|UNCHARACTERIZED GTP-binding protein MJ1332|Methanocaldococcus jannaschii (strain

Query: 1 VDFWHDGMCVRNWE 14
+D W + +NW+
Sbjct: 139 IDMWIYSILTKNWD 152


>sp|RL22_IGNH4|LARGE ribosomal subunit protein uL22|Ignicoccus hospitalis (strain KIN4/I

Query: 5 HDGMCVRNW 13
H GM ++ W
Sbjct: 125 HKGMTIKRW 133


>sp|GLMM_METJA|PHOSPHOGLUCOSAMINE mutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DFWHDGMCVRNW 13
+ W D +RN+
Sbjct: 135 EIWEDSRAIRNY 146


>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDFWH 5
+DFWH
Sbjct: 151 IDFWH 155


>sp|DPCKG_METS5|GTP-DEPENDENT dephospho-CoA kinase|Metallosphaera sedula (strain ATCC 51363

Query: 7 GMCVRNWE 14
+C+ NWE
Sbjct: 148 AVCLENWE 155


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FWHDGMCV 10
F HDGM V
Sbjct: 75 FRHDGMAV 82


>sp|HTPX_METKA|PROTEASE HtpX homolog|Methanopyrus kandleri (strain AV19 /

Query: 2 DFWHDGMCVRNWE 14
D W + M +WE
Sbjct: 195 DPWLNAMYTEDWE 207


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FWHDGMCV 10
+HDG C+
Sbjct: 340 LYHDGECI 347


>sp|RL22_THEPD|LARGE ribosomal subunit protein uL22|Thermofilum pendens (strain DSM 2475

Query: 5 HDGMCVRNW 13
H GM +RN+
Sbjct: 117 HKGMKIRNY 125


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 4 WHDGMCV 10
W+DG C+
Sbjct: 209 WYDGPCL 215


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDFWHD 6
VD WHD
Sbjct: 72 VDNWHD 77


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDFWHD 6
VD WHD
Sbjct: 72 VDNWHD 77


>sp|Y950_SULTO|UPF0200 protein STK_09500|Sulfurisphaera tokodaii (strain DSM 16993

Query: 10 VRNWE 14
VRNWE
Sbjct: 87 VRNWE 91


>sp|HUTU_THEVO|PROBABLE urocanate hydratase|Thermoplasma volcanium (strain ATCC 51530

Query: 7 GMCVRNWE 14
G RNWE
Sbjct: 52 GKAARNWE 59


>sp|HUTU_THEAC|PROBABLE urocanate hydratase|Thermoplasma acidophilum (strain ATCC 25905

Query: 7 GMCVRNWE 14
G RNWE
Sbjct: 52 GKAARNWE 59


>sp|QUED_HALS3|PROBABLE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Halobacterium

Query: 5 HDGMCVR 11
HDG C R
Sbjct: 38 HDGKCSR 44


>sp|RL22_STAMF|LARGE ribosomal subunit protein uL22|Staphylothermus marinus (strain ATCC

Query: 5 HDGMCVRNW 13
H GM ++ W
Sbjct: 123 HKGMTLKRW 131


>sp|6PGD_HALVD|6-PHOSPHOGLUCONATE dehydrogenase, NAD(+)-dependent, decarboxylating|Haloferax volcanii

Query: 4 WHDGMCVRNW 13
W++G +R+W
Sbjct: 206 WNNGAVIRSW 215


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 VDFWHDG 7
V FW DG
Sbjct: 427 VPFWKDG 433


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 5 HDGMC 9
HDG+C
Sbjct: 262 HDGLC 266




92|SequenceR|465|456|VDFWHDGMCV

>sp|MCH_METKA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanopyrus kandleri (strain AV19 /

Query: 2 DFWHDGMCV 10
+F HDG+C+
Sbjct: 67 EFEHDGLCL 75


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDFWHDGMCV 10
+ FW +G C+
Sbjct: 218 IGFWREGCCL 227


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 VDFWHD 6
VDFW+D
Sbjct: 102 VDFWND 107


>sp|UBIX_ARCFU|FLAVIN prenyltransferase UbiX|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FWHDGMCV 10
F HDGM V
Sbjct: 75 FRHDGMAV 82


>sp|Y480_METJA|UNCHARACTERIZED protein MJ0480|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VDFWH 5
+DFWH
Sbjct: 151 IDFWH 155


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FWHDGMCV 10
+HDG C+
Sbjct: 340 LYHDGECI 347


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 4 WHDGMCV 10
W+DG C+
Sbjct: 209 WYDGPCL 215


>sp|HTR4_HALSA|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 700922

Query: 1 VDFWHD 6
VD WHD
Sbjct: 72 VDNWHD 77


>sp|HTR4_HALS3|TRANSDUCER protein Htr4|Halobacterium salinarum (strain ATCC 29341

Query: 1 VDFWHD 6
VD WHD
Sbjct: 72 VDNWHD 77


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 1 VDFWHDG 7
V FW DG
Sbjct: 427 VPFWKDG 433


>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 5 HDGMC 9
HDG+C
Sbjct: 262 HDGLC 266


>sp|TRMY_THEKO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 1 VDFWHDGM 8
V+ W DGM
Sbjct: 191 VNIWLDGM 198


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 VDFWHDGM 8
++ WH G+
Sbjct: 157 IELWHKGL 164


>sp|MTNA_ARCFU|PUTATIVE methylthioribose-1-phosphate isomerase|Archaeoglobus fulgidus

Query: 3 FWHDGM 8
FW DG+
Sbjct: 5 FWDDGL 10


>sp|RL18E_HALSA|LARGE ribosomal subunit protein eL18|Halobacterium salinarum (strain

Query: 2 DFWHD 6
D WHD
Sbjct: 25 DVWHD 29


>sp|RL18E_HALS3|LARGE ribosomal subunit protein eL18|Halobacterium salinarum (strain

Query: 2 DFWHD 6
D WHD
Sbjct: 25 DVWHD 29


>sp|ILVD_ARCFU|DIHYDROXY-ACID dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 HDGMC 9
H+GMC
Sbjct: 84 HEGMC 88


>sp|RS27A_AERPE|SMALL ribosomal subunit protein eS31|Aeropyrum pernix (strain ATCC

Query: 1 VDFWHDGMC 9
V+ WH G C
Sbjct: 45 VERWHCGKC 53


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WHDGMCV 10
W +G CV
Sbjct: 65 WDEGYCV 71


>sp|FWDF_METJA|POLYFERREDOXIN protein FwdF|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 WHDGMCV 10
W+D +CV
Sbjct: 28 WNDELCV 34




THE END