1|Sequence|1|10|MANLGCWMLV
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 MANLGCWM 8
MAN+G W+
Sbjct: 2015 MANIGNWI 2022
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 2 ANLGCWMLV 10
A GCW+ +
Sbjct: 510 ATYGCWLYI 518
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 MANLGCWM 8
MAN+G W+
Sbjct: 2030 MANIGNWI 2037
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 MANLGCWML 9
+A L CW+L
Sbjct: 382 VAPLDCWIL 390
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 MANLGCWML 9
+A L CW+L
Sbjct: 382 VAPLDCWIL 390
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 MANLGCWML 9
+A L CW+L
Sbjct: 382 VAPLDCWIL 390
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 ANLGCWMLV 10
++ GC+MLV
Sbjct: 327 SDCGCFMLV 335
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 ANLGCWMLV 10
++ GC+MLV
Sbjct: 328 SDCGCFMLV 336
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 4 LGCWMLV 10
L CW LV
Sbjct: 2014 LDCWRLV 2020
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 ANLGCW 7
ANL CW
Sbjct: 2233 ANLFCW 2238
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 MANLGCWM 8
+AN+G W+
Sbjct: 2030 LANIGNWI 2037
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 1 MANLGCW 7
MAN G W
Sbjct: 182 MANRGLW 188
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 5 GCWML 9
GCW++
Sbjct: 575 GCWII 579
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 5 GCWML 9
GCW++
Sbjct: 575 GCWII 579
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 5 GCWML 9
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 5 GCWML 9
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 5 GCWML 9
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 5 GCWML 9
GCW++
Sbjct: 582 GCWII 586
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 5 GCWML 9
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 5 GCWML 9
GCW++
Sbjct: 581 GCWII 585
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 5 GCWML 9
GCW++
Sbjct: 569 GCWVI 573
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 5 GCWML 9
GCW++
Sbjct: 582 GCWVI 586
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 MANLGCWM 8
+ NLG WM
Sbjct: 720 IQNLGHWM 727
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 MANLGCWM 8
+ NLG WM
Sbjct: 720 IQNLGHWM 727
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 ANLGCWML 9
A+LG W +
Sbjct: 1225 ADLGTWQM 1232
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ANLGC 6
AN+GC
Sbjct: 429 ANIGC 433
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ANLGC 6
AN+GC
Sbjct: 429 ANIGC 433
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 LGCWML 9
L CW L
Sbjct: 321 LSCWWL 326
2|Sequence|6|15|CWMLVLFVAT
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 CWMLVL 6
CW LVL
Sbjct: 2015 CWRLVL 2020
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CWMLVLFVAT 10
CW+ FV++
Sbjct: 7 CWLFGYFVSS 16
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 337 CWFNQLFV 344
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 338 CWFNQLFV 345
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 336 CWFNQLFV 343
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 366 CWFNQLFV 373
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 338 CWFNQLFV 345
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 325 CWFNELFV 332
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 325 CWFNELFV 332
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 324 CWANQLFV 331
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 351 CWANQLFV 358
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 354 CWANQLFV 361
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 WMLVLFVA 9
W++ FVA
Sbjct: 476 WVMYFFVA 483
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 WMLVLFVA 9
W++ FVA
Sbjct: 476 WVMYFFVA 483
>sp|VSSGP_EBOZM|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Mayinga-76)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VSSGP_EBOZ5|SUPER small secreted glycoprotein|Zaire ebolavirus (strain Kikwit-95)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VSGP_EBOG4|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|ORF48_HHV8P|TEGUMENT protein ORF48|Human herpesvirus 8 type P
Query: 1 CWMLVLFV 8
CW+ +F+
Sbjct: 207 CWLYHIFI 214
>sp|VSGP_EBOEC|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VSGP_EBOZM|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VSGP_EBOZ5|PRE-SMALL/SECRETED glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 WMLVLFVAT 10
W+++LF T
Sbjct: 22 WVIILFQRT 30
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 322 CWSNQLFV 329
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 353 CWHNQLFV 360
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 385 CWHNQLFV 392
>sp|UL139_HCMVM|MEMBRANE glycoprotein UL139|Human cytomegalovirus (strain Merlin)
Query: 2 WMLVLFV 8
W+LVLF
Sbjct: 3 WILVLFA 9
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 CWMLVL 6
C+MLVL
Sbjct: 851 CYMLVL 856
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 329 CWRNELFV 336
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 2 WMLVLFVA 9
W++V+F A
Sbjct: 188 WVIVIFRA 195
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 WMLVLFVA 9
W++V+F A
Sbjct: 189 WVIVIFRA 196
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WMLVLFV 8
W L LFV
Sbjct: 5 WCLTLFV 11
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 WMLVLFV 8
W L LFV
Sbjct: 5 WCLTLFV 11
>sp|GN_HHV2H|ENVELOPE glycoprotein N|Human herpesvirus 2 (strain HG52)
Query: 2 WMLVLFVA 9
W+++LFVA
Sbjct: 11 WVVLLFVA 18
>sp|VSSGP_EBOSU|SUPER small secreted glycoprotein|Sudan ebolavirus (strain
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VSGP_EBOSU|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VSGP_EBOSM|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VSGP_EBOSB|PRE-SMALL/SECRETED glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 WMLVLF 7
W+++LF
Sbjct: 23 WVIILF 28
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 CWMLVLFV 8
CW LFV
Sbjct: 322 CWNNQLFV 329
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 WMLVLF 7
WML+L
Sbjct: 740 WMLILL 745
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 CWMLVLFV 8
CW LF+
Sbjct: 338 CWANQLFI 345
>sp|VSGP_TAFVC|PRE-SMALL/SECRETED glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 2 WMLVLF 7
W+++LF
Sbjct: 22 WVIILF 27
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 WMLVLF 7
WML+L
Sbjct: 740 WMLILL 745
3|Sequence|11|20|LFVATWSDLG
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 LFVATWSDLG 10
+++A WSD+G
Sbjct: 378 MWLAWWSDIG 387
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 ATWSDL 9
ATWSD+
Sbjct: 2202 ATWSDI 2207
>sp|CAP6_ADE02|PRE-PROTEIN VI|Human adenovirus C serotype 2
Query: 2 FVATWSDLG 10
F+ W D+G
Sbjct: 18 FMGNWQDIG 26
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 2 FVATWSDLG 10
F+ W D+G
Sbjct: 18 FMGNWQDIG 26
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 2 FVATW 6
FVATW
Sbjct: 394 FVATW 398
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 FVATWSDL 9
FV+ WS++
Sbjct: 975 FVSEWSEI 982
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 LFVATW 6
LF+ TW
Sbjct: 672 LFIKTW 677
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 FVATWSDL 9
FV+ WS+
Sbjct: 848 FVSEWSEF 855
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 FVATWSDL 9
FV+ WS+
Sbjct: 984 FVSEWSEF 991
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 FVATWSDL 9
FV+ WS+
Sbjct: 984 FVSEWSEF 991
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 6 WSDLG 10
WSD G
Sbjct: 491 WSDFG 495
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 6 WSDLG 10
WSD G
Sbjct: 491 WSDFG 495
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LFVATWSDL 9
LFV T+S L
Sbjct: 2666 LFVPTYSGL 2674
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 FVATW 6
F+ATW
Sbjct: 230 FMATW 234
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 LFVATW 6
LF+A W
Sbjct: 328 LFIALW 333
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 LFVATW 6
LF+A W
Sbjct: 328 LFIALW 333
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LFVATW 6
LF+A W
Sbjct: 328 LFIALW 333
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LFVATW 6
LF+A W
Sbjct: 328 LFIALW 333
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 LFVATW 6
LF+A W
Sbjct: 328 LFIALW 333
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 1 LFVATWSDLG 10
LF+A ++LG
Sbjct: 320 LFIAGMAELG 329
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 TWSDLG 10
+WS+LG
Sbjct: 2447 SWSELG 2452
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 6 WSDLG 10
WSD+G
Sbjct: 1257 WSDVG 1261
4|Sequence|16|25|WSDLGLCKKR
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 WSDLGLCKK 9
WSD +C K
Sbjct: 1442 WSDQTICYK 1450
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WSDLGLCKK 9
WSD +C K
Sbjct: 1442 WSDQTICYK 1450
>sp|DR4_HHV6U|UNCHARACTERIZED protein DR4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WSDLGLCKKR 10
WS LGL R
Sbjct: 12 WSPLGLALPR 21
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 383 WEQGGLCK 390
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 387 WEQGGLCK 394
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 DLGLCKK 9
D+G+C K
Sbjct: 607 DIGICSK 613
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 LGLCKKR 10
LG+C KR
Sbjct: 419 LGVCGKR 425
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 390 WEQGGLCK 397
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 388 WEQGGLCK 395
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 5 GLCKKR 10
LCKKR
Sbjct: 283 ALCKKR 288
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 GLCKKR 10
LCKKR
Sbjct: 283 ALCKKR 288
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 GLCKKR 10
LCKKR
Sbjct: 283 ALCKKR 288
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 5 GLCKKR 10
LCKKR
Sbjct: 283 ALCKKR 288
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 387 WEQGGLCK 394
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 LGLCKKR 10
L +CKKR
Sbjct: 936 LSICKKR 942
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 387 WEQGGLCK 394
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 387 WEQGGLCK 394
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 387 WEQGGLCK 394
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 WSDLGLCK 8
W GLCK
Sbjct: 387 WEQGGLCK 394
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 DLGLCKKR 10
D+GLC R
Sbjct: 1103 DVGLCMYR 1110
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 DLGLCKKR 10
D+GLC R
Sbjct: 1103 DVGLCMYR 1110
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 WSDLGL 6
W+D+GL
Sbjct: 181 WADMGL 186
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 WSDLGL 6
W DLG+
Sbjct: 207 WDDLGI 212
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 3 DLGLCKK 9
D+G+C K
Sbjct: 506 DIGMCLK 512
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 WSDLGLCK 8
+++LGLC
Sbjct: 261 YNNLGLCN 268
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 WSDLGLCK 8
+++LGLC
Sbjct: 261 YNNLGLCN 268
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 WSDLGLCK 8
+++LGLC
Sbjct: 261 YNNLGLCN 268
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WSDLGLCK 8
+++LGLC
Sbjct: 261 YNNLGLCN 268
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 WSDLGLCK 8
+++LGLC
Sbjct: 261 YNNLGLCN 268
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 WSDLGLCK 8
+++LGLC
Sbjct: 261 YNNLGLCN 268
5|Sequence|21|30|LCKKRPKPGG
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 2 CKKRPKPGG 10
C+K P+P G
Sbjct: 1313 CQKDPRPSG 1321
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CKKRPKPG 9
C +RP PG
Sbjct: 171 CAERPLPG 178
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 LCKKRP 6
LCKK+P
Sbjct: 72 LCKKKP 77
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 CKKRPKP 8
C K PKP
Sbjct: 1686 CGKSPKP 1692
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 CKKRPKP 8
C K PKP
Sbjct: 1686 CGKSPKP 1692
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3089 RPTPGG 3094
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3089 RPAPGG 3094
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3090 RPAPGG 3095
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3089 RPAPGG 3094
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3089 RPAPGG 3094
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3089 RPAPGG 3094
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3089 RPAPGG 3094
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3090 RPAPGG 3095
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3071 RPGPGG 3076
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3090 RPAPGG 3095
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LCKKRPK 7
+C+K+PK
Sbjct: 1653 ICEKKPK 1659
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3082 RPGPGG 3087
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 LCKKRPKPG 9
LCK P+P
Sbjct: 1400 LCKDCPQPA 1408
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 RPKPGG 10
RP PGG
Sbjct: 3106 RPGPGG 3111
Query: 1 LCKKRPK 7
LC RPK
Sbjct: 2707 LCPYRPK 2713
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 4 KRPKPGG 10
K PKP G
Sbjct: 642 KEPKPAG 648
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 KKRPKPGG 10
++RP P G
Sbjct: 97 RRRPAPAG 104
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 LCKKRPKPG 9
LCK P P
Sbjct: 1392 LCKDCPTPA 1400
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RPKPG 9
RP+PG
Sbjct: 278 RPRPG 282
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RPKPG 9
RP+PG
Sbjct: 278 RPRPG 282
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 CKKRPK 7
C KRPK
Sbjct: 685 CFKRPK 690
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 CKKRPK 7
C KRPK
Sbjct: 681 CFKRPK 686
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 3 KKRPKPG 9
K PKPG
Sbjct: 120 KSEPKPG 126
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 KKRPKPG 9
+ +PKPG
Sbjct: 884 QTKPKPG 890
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 3 KKRPKPG 9
+++P+PG
Sbjct: 476 QRKPRPG 482
Query: 2 CKKRPKPGG 10
CK P P G
Sbjct: 174 CKNVPVPQG 182
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 KRPKPG 9
++PKPG
Sbjct: 92 RKPKPG 97
>sp|HEX8_ADE03|HEXON-ASSOCIATED protein|Human adenovirus B serotype 3
Query: 1 LCKKRPK 7
LC+ RP+
Sbjct: 22 LCRHRPQ 28
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 5 RPKPG 9
+PKPG
Sbjct: 892 KPKPG 896
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 5 RPKPG 9
+PKPG
Sbjct: 892 KPKPG 896
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 3 KKRPKPG 9
+++P+PG
Sbjct: 475 QRKPRPG 481
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 KRPKPG 9
+RP+PG
Sbjct: 1024 QRPQPG 1029
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 4 KRPKPG 9
+RP+PG
Sbjct: 1024 QRPQPG 1029
6|Sequence|26|35|PKPGGWNTGG
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 1 PKPGGWNTG 9
PKP G TG
Sbjct: 644 PKPAGLTTG 652
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 PKPGGWN 7
PK G WN
Sbjct: 1135 PKSGSWN 1141
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 PKPGGWN 7
PK G WN
Sbjct: 1135 PKSGSWN 1141
>sp|CEP1_EBVG|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGGWNTG 9
PG WN G
Sbjct: 178 PGPWNEG 184
>sp|CEP1_EBVB9|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGGWNTG 9
PG WN G
Sbjct: 178 PGPWNEG 184
>sp|CEP1_EBVA8|CYTOPLASMIC envelopment protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PGGWNTG 9
PG WN G
Sbjct: 178 PGPWNEG 184
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 PKPGGWNTG 9
P G WN G
Sbjct: 516 PVKGAWNIG 524
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PKPGGWNTG 9
P G WN G
Sbjct: 516 PVKGAWNIG 524
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 3 PGGWNT 8
PG WNT
Sbjct: 1145 PGVWNT 1150
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 PGGWNT 8
PG WNT
Sbjct: 1145 PGVWNT 1150
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PGGWNT 8
PG WNT
Sbjct: 1145 PGVWNT 1150
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PGGWNT 8
PG WNT
Sbjct: 1145 PGVWNT 1150
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 3 PGGWNT 8
PG WNT
Sbjct: 1145 PGVWNT 1150
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 KPGGWNT 8
+P GWN+
Sbjct: 283 RPEGWNS 289
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KPGGWNTG 9
K G WN G
Sbjct: 517 KKGAWNIG 524
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KPGGWNTG 9
K G WN G
Sbjct: 517 KKGAWNIG 524
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 PKPGGWN 7
P PG WN
Sbjct: 743 PIPGKWN 749
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGGWNTGG 10
PGGW G
Sbjct: 787 PGGWCVPG 794
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGGWNTGG 10
PGGW G
Sbjct: 787 PGGWCVPG 794
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PGGWNTGG 10
PGGW G
Sbjct: 787 PGGWCVPG 794
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 PKPGGW 6
P+PG W
Sbjct: 443 PRPGLW 448
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 PKPGGW 6
P+PG W
Sbjct: 443 PRPGLW 448
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 PKPGGW 6
P+PG W
Sbjct: 443 PRPGLW 448
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PKPGGW 6
P+PG W
Sbjct: 443 PRPGLW 448
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PKPGGW 6
P+PG W
Sbjct: 443 PRPGLW 448
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PKPGGW 6
P+PG W
Sbjct: 443 PRPGLW 448
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PKPGGWNTG 9
P PG +N G
Sbjct: 322 PAPGQFNPG 330
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 KPGGWNTGG 10
+PG +N GG
Sbjct: 677 EPGTFNLGG 685
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 KPGGWNTGG 10
+PG +N GG
Sbjct: 677 EPGTFNLGG 685
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 PGGWNT 8
PG WNT
Sbjct: 531 PGAWNT 536
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 PGGWNT 8
PG WNT
Sbjct: 531 PGAWNT 536
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 6 WNTGG 10
WN GG
Sbjct: 165 WNVGG 169
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 PGGWNTGG 10
PGG + GG
Sbjct: 599 PGGLDAGG 606
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 5 GWNTG 9
GW+TG
Sbjct: 110 GWSTG 114
>sp|EAR_EBVG|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GGWNT 8
GGW+T
Sbjct: 148 GGWST 152
>sp|EAR_EBVB9|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GGWNT 8
GGW+T
Sbjct: 148 GGWST 152
>sp|EAR_EBVA8|APOPTOSIS regulator BHRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GGWNT 8
GGW+T
Sbjct: 148 GGWST 152
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 PKPGGWNTG 9
PKP NTG
Sbjct: 447 PKPDDNNTG 455
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 PKPGGWN 7
P+P W+
Sbjct: 741 PRPSSWD 747
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 WNTGG 10
WN+GG
Sbjct: 281 WNSGG 285
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 WNTGG 10
WN GG
Sbjct: 98 WNIGG 102
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 PKPGGWNT 8
PK W+T
Sbjct: 479 PKKSNWDT 486
>sp|US03_HCMVM|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 WNTGG 10
WN GG
Sbjct: 98 WNIGG 102
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 6 WNTGG 10
WN GG
Sbjct: 98 WNIGG 102
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 6 WNTGG 10
WN GG
Sbjct: 531 WNEGG 535
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 6 WNTGG 10
WN GG
Sbjct: 531 WNEGG 535
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PKPGGW 6
P PG W
Sbjct: 1687 PAPGQW 1692
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GGWNTG 9
G WNTG
Sbjct: 1561 GSWNTG 1566
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 GGWNTG 9
G WNTG
Sbjct: 1562 GSWNTG 1567
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PGGWNTGG 10
P W GG
Sbjct: 21 PTSWENGG 28
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 2 KPGGW 6
+PGGW
Sbjct: 458 RPGGW 462
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGGW 6
PGGW
Sbjct: 12 PGGW 15
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PGGW 6
PGGW
Sbjct: 12 PGGW 15
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PGGW 6
PGGW
Sbjct: 12 PGGW 15
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PGGWN 7
P GWN
Sbjct: 93 PPGWN 97
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PGGWN 7
P GWN
Sbjct: 93 PPGWN 97
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 4 GGWNT 8
GGW T
Sbjct: 504 GGWKT 508
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 GGWN 7
GGWN
Sbjct: 397 GGWN 400
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 GGWNTG 9
G W+TG
Sbjct: 1114 GQWHTG 1119
7|Sequence|31|40|WNTGGSRYPG
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WNTGGSRYPG 10
WN RYP
Sbjct: 6310 WNCNVDRYPA 6319
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WNTGGSRYPG 10
WN RYP
Sbjct: 6287 WNCNVDRYPA 6296
>sp|ORF57_VZVO|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Oka vaccine)
Query: 1 WNTGGSRYP 9
+NTG +R+P
Sbjct: 56 YNTGEARHP 64
>sp|ORF57_VZVD|UNCHARACTERIZED protein 57|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WNTGGSRYP 9
+NTG +R+P
Sbjct: 56 YNTGEARHP 64
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 WNTGGSRYPG 10
W T G YP
Sbjct: 1112 WVTAGDSYPA 1121
>sp|US03_HCMVT|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 WNTGGSRYP 9
WN GG P
Sbjct: 98 WNIGGHPVP 106
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 WNTGGSRYP 9
WN +YP
Sbjct: 6279 WNCNVDKYP 6287
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 WNTGGSRYP 9
WN +YP
Sbjct: 6317 WNCNVDKYP 6325
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 WNTGGSRYP 9
WN +YP
Sbjct: 6337 WNCNVDKYP 6345
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 WNTGGSRYP 9
WN +YP
Sbjct: 6367 WNCNVDKYP 6375
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WNTGGSR 7
W T GSR
Sbjct: 609 WRTSGSR 615
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WNTGGSRYP 9
WN +YP
Sbjct: 6289 WNCNVPKYP 6297
>sp|TRM1_EBVB9|TRIPARTITE terminase subunit 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WNTGG 5
WN+GG
Sbjct: 281 WNSGG 285
>sp|SF33K_ADE02|PROTEIN 33K|Human adenovirus C serotype 2
Query: 1 WNTGGSR 7
W+T G+R
Sbjct: 97 WDTTGTR 103
>sp|SF33K_ADE05|PROTEIN 33K|Human adenovirus C serotype 5
Query: 1 WNTGGSR 7
W+T G+R
Sbjct: 98 WDTTGTR 104
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 WNTGGSRYPG 10
+N G YPG
Sbjct: 119 YNAGTLMYPG 128
>sp|US03_HCMVA|MEMBRANE glycoprotein US3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 WNTGG 5
WN GG
Sbjct: 98 WNIGG 102
8|Sequence|36|45|SRYPGQGSPG
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SRYPGQGSPG 10
+ YPGQG G
Sbjct: 1303 TTYPGQGCAG 1312
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SRYPGQGSPG 10
+ YPGQG G
Sbjct: 1303 TTYPGQGCAG 1312
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 SRYPGQGSPG 10
+ YPGQG G
Sbjct: 1327 TTYPGQGLNG 1336
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 SRYPGQGSPG 10
+ YPGQG G
Sbjct: 1327 TTYPGQGLNG 1336
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 SRYPGQGS 8
+R PG+GS
Sbjct: 987 ARKPGKGS 994
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SRYPGQGSPG 10
S++P G+PG
Sbjct: 441 SQFPRPGTPG 450
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PGQGSPG 10
PGQ +PG
Sbjct: 324 PGQFNPG 330
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 374 QYEGDGSP 381
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 505 QYEGDGSP 512
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 605 QYEGDGSP 612
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 325 QYEGDGSP 332
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 325 QYEGDGSP 332
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 PGQGSPG 10
PG G PG
Sbjct: 467 PGAGVPG 473
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 RYPGQGSP 9
+Y G GSP
Sbjct: 325 QYEGDGSP 332
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 SRYPGQGSPG 10
SR+ G+PG
Sbjct: 24 SRFSAAGNPG 33
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RYPGQGSP 9
+Y G G+P
Sbjct: 604 KYEGTGAP 611
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RYPGQGSP 9
+Y G G+P
Sbjct: 604 KYEGTGAP 611
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 PGQGSPG 10
PG+G PG
Sbjct: 1741 PGRGLPG 1747
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RYPGQGSP 9
+Y G G+P
Sbjct: 604 KYEGAGAP 611
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RYPGQGSP 9
+Y G G+P
Sbjct: 604 KYEGAGAP 611
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 RYPGQGSP 9
+Y G G+P
Sbjct: 604 KYEGAGAP 611
9|Sequence|41|50|QGSPGGNRYP
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 GSPGGNR 8
G PGGNR
Sbjct: 6 GRPGGNR 12
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 SPGGNRY 9
SPG NRY
Sbjct: 1083 SPGPNRY 1089
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 SPGGNRY 9
SPG NRY
Sbjct: 1083 SPGPNRY 1089
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 SPGGNRYP 10
SPGG+R P
Sbjct: 51 SPGGSRAP 58
>sp|ICP27_HHV7J|MRNA export factor ICP27 homolog|Human herpesvirus 7 (strain JI)
Query: 1 QGSPGGNRYP 10
Q +PG +YP
Sbjct: 276 QQTPGSFQYP 285
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 QGSPGGNRY 9
QG+ GG RY
Sbjct: 587 QGATGGKRY 595
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 QGSPGGNRY 9
QG+ GG RY
Sbjct: 587 QGATGGKRY 595
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 QGSPGGNRY 9
QG+ GG RY
Sbjct: 587 QGATGGKRY 595
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 SPGGNRYP 10
+PGG R+P
Sbjct: 138 TPGGTRWP 145
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 PGGNRY 9
PGGN Y
Sbjct: 3017 PGGNMY 3022
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 PGGNRY 9
PGGN Y
Sbjct: 3018 PGGNMY 3023
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 GSPGGNR 8
G PGG R
Sbjct: 648 GRPGGQR 654
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 PGGNRY 9
PGGN Y
Sbjct: 3018 PGGNMY 3023
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 GSPGGN 7
GSPGG+
Sbjct: 89 GSPGGS 94
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 2 GSPGGNRYP 10
G+P RYP
Sbjct: 72 GAPSPERYP 80
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 SPGGNR 8
SPGG R
Sbjct: 2054 SPGGQR 2059
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 SPGGNRY 9
SPGG Y
Sbjct: 1088 SPGGRMY 1094
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 4 PGGNR 8
PGGN+
Sbjct: 248 PGGNK 252
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 3 SPGGNRYP 10
SPGG R P
Sbjct: 206 SPGGQRDP 213
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 4 PGGNR 8
PGGN+
Sbjct: 248 PGGNK 252
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 PGGNR 8
PGGN+
Sbjct: 248 PGGNK 252
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 4 PGGNR 8
PGGN+
Sbjct: 248 PGGNK 252
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GSPGGNRY 9
G GGN Y
Sbjct: 3024 GKTGGNMY 3031
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 SPGGNRY 9
SPG N Y
Sbjct: 1083 SPGKNMY 1089
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 QGSPGGN 7
QG+ GGN
Sbjct: 6658 QGNLGGN 6664
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 QGSPGGN 7
QG+ GGN
Sbjct: 6678 QGNLGGN 6684
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 QGSPGGN 7
QG+ GGN
Sbjct: 6708 QGNLGGN 6714
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 SPGGNRY 9
+PG N+Y
Sbjct: 348 TPGSNQY 354
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 SPGGNRY 9
+PG N+Y
Sbjct: 348 TPGSNQY 354
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 SPGGNRY 9
+PG N+Y
Sbjct: 347 TPGSNQY 353
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 SPGGNRY 9
+PG N+Y
Sbjct: 347 TPGSNQY 353
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 SPGGNRY 9
+PG N+Y
Sbjct: 347 TPGSNQY 353
>sp|SF33K_ADE40|PROTEIN 33K|Human adenovirus F serotype 40
Query: 4 PGGNRYP 10
P GN++P
Sbjct: 3 PKGNKHP 9
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 SPGGNRY 9
SPG N Y
Sbjct: 1083 SPGPNMY 1089
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 GSPGGNRY 9
G P G RY
Sbjct: 1225 GMPTGTRY 1232
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 GSPGGNRY 9
G P G RY
Sbjct: 1225 GMPTGTRY 1232
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 GSPGGNRY 9
G P G RY
Sbjct: 1226 GMPTGTRY 1233
10|Sequence|46|55|GNRYPPQGGG
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 PPQGGG 10
PPQGGG
Sbjct: 2414 PPQGGG 2419
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 GNRYPPQGGG 10
G+R PP GG
Sbjct: 54 GSRAPPTSGG 63
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 NRYPPQGG 9
NRYP Q G
Sbjct: 160 NRYPAQPG 167
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 GNRYPPQGGG 10
GN+YP Q G
Sbjct: 133 GNKYPGQPGA 142
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 RYPPQGGG 10
R PP GG
Sbjct: 774 RAPPSGGA 781
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 RYPPQGG 9
RYP +GG
Sbjct: 1024 RYPHRGG 1030
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RYPPQGG 9
RYP +GG
Sbjct: 1024 RYPHRGG 1030
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 NR-YPPQG 8
NR YPP+G
Sbjct: 691 NREYPPEG 698
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 NR-YPPQG 8
NR YPP+G
Sbjct: 691 NREYPPEG 698
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 NR-YPPQG 8
NR YPP+G
Sbjct: 690 NREYPPEG 697
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 NR-YPPQG 8
NR YPP+G
Sbjct: 690 NREYPPEG 697
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 142 GLRIPPEG 149
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 GNRYPPQG 8
G R PP+G
Sbjct: 143 GLRIPPEG 150
>sp|GH_HHV6U|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NRYPPQG 8
N YP QG
Sbjct: 126 NMYPSQG 132
>sp|GH_HHV6G|ENVELOPE glycoprotein H|Human herpesvirus 6A (strain GS)
Query: 2 NRYPPQG 8
N YP QG
Sbjct: 126 NMYPSQG 132
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 PPQGG 9
PPQGG
Sbjct: 545 PPQGG 549
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 PPQGGG 10
P QGGG
Sbjct: 285 PSQGGG 290
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 5 PPQGGG 10
PP+GG
Sbjct: 326 PPEGGA 331
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 NRYPPQ 7
NRYP Q
Sbjct: 958 NRYPSQ 963
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 PPQGG 9
PPQGG
Sbjct: 2414 PPQGG 2418
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 RYPPQG 8
++PPQG
Sbjct: 451 QFPPQG 456
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 4 YPPQGG 9
+PP GG
Sbjct: 69 HPPNGG 74
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 4 YPPQGG 9
+PP GG
Sbjct: 69 HPPNGG 74
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 4 YPPQGG 9
+PP GG
Sbjct: 69 HPPNGG 74
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 4 YPPQGG 9
+PP GG
Sbjct: 69 HPPNGG 74
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 4 YPPQGG 9
+PP GG
Sbjct: 69 HPPNGG 74
>sp|VE2_HPV63|REGULATORY protein E2|Human papillomavirus type 63
Query: 3 RYPPQGG 9
R PP+GG
Sbjct: 295 RSPPKGG 301
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 YPPQGGG 10
YPP G G
Sbjct: 997 YPPFGAG 1003
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 YPPQGGG 10
YPP G G
Sbjct: 997 YPPFGAG 1003
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 YPPQGGG 10
YPP G G
Sbjct: 997 YPPFGAG 1003
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 YPPQGGG 10
YPP G G
Sbjct: 998 YPPFGAG 1004
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 YPPQGGG 10
YPP G G
Sbjct: 998 YPPFGAG 1004
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 3 RYPPQG 8
R+PP+G
Sbjct: 468 RHPPEG 473
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RYPPQGGG 10
R PP G G
Sbjct: 605 RDPPPGAG 612
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 YPPQGGG 10
YPP G G
Sbjct: 998 YPPFGAG 1004
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RYPPQGGG 10
R PP G G
Sbjct: 605 RDPPPGAG 612
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RYPPQGGG 10
R PP G G
Sbjct: 605 RDPPPGAG 612
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 4 YPPQGGG 10
Y PQGGG
Sbjct: 121 YNPQGGG 127
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 3 RYPPQGGG 10
RYP GG
Sbjct: 132 RYPMHSGG 139
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 YPPQGGG 10
Y P GGG
Sbjct: 458 YTPPGGG 464
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 NRYPPQGG 9
N+YP Q G
Sbjct: 163 NKYPSQPG 170
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 GNRYPPQ 7
G RY PQ
Sbjct: 40 GTRYCPQ 46
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 5 PPQGGG 10
PP GGG
Sbjct: 238 PPGGGG 243
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 NRYPPQG 8
N PPQG
Sbjct: 541 NTRPPQG 547
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 NRYPPQGG 9
NRY +GG
Sbjct: 549 NRYSLKGG 556
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 3 RYPPQGG 9
RY P GG
Sbjct: 43 RYCPMGG 49
>sp|VE8E2_HPV63|PROTEIN E8^E2C|Human papillomavirus type 63
Query: 3 RYPPQGG 9
R PP+GG
Sbjct: 104 RSPPKGG 110
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 4 YPPQGGG 10
+PP G G
Sbjct: 1005 FPPYGSG 1011
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 YPPQGGG 10
+PP G G
Sbjct: 1004 FPPYGSG 1010
11|Sequence|51|60|PQGGGGWGQP
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 GGGGWGQ 9
GGG WG+
Sbjct: 1322 GGGSWGE 1328
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 4 GGGWG 8
GGGWG
Sbjct: 294 GGGWG 298
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 GGGGW 7
GGGGW
Sbjct: 403 GGGGW 407
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 PQGGGGWG 8
P GG G+G
Sbjct: 475 PDGGHGYG 482
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 PQGGGG 6
PQ GGG
Sbjct: 310 PQSGGG 315
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 QGGGGWG 8
+GGG WG
Sbjct: 700 EGGGPWG 706
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PQGGGGWGQP 10
P G WG P
Sbjct: 43 PSRSGFWGSP 52
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 2 QGGGGW 7
QGGG W
Sbjct: 250 QGGGSW 255
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 2 QGGGGW 7
QGGG W
Sbjct: 250 QGGGSW 255
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 2 QGGGGW 7
QGGG W
Sbjct: 250 QGGGSW 255
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 2 QGGGGW 7
QGGG W
Sbjct: 250 QGGGSW 255
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 2 QGGGGW 7
QGGG W
Sbjct: 250 QGGGSW 255
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 PQGGGG 6
PQGG G
Sbjct: 935 PQGGAG 940
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 PQGGGG 6
PQGG G
Sbjct: 935 PQGGAG 940
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 QGGGGWGQ 9
QG WG+
Sbjct: 3 QGAPSWGR 10
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 PQGGGGWGQP 10
P G G G+P
Sbjct: 70 PLGSAGSGRP 79
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 2 QGGGGW 7
QGGG W
Sbjct: 250 QGGGSW 255
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 6 GWGQP 10
GWG P
Sbjct: 386 GWGGP 390
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 PQGGGGWGQP 10
P GGGG P
Sbjct: 238 PPGGGGACAP 247
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 6 GWGQP 10
GWG P
Sbjct: 386 GWGGP 390
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 4 GGGWG 8
GGGW
Sbjct: 213 GGGWA 217
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 6 GWGQP 10
GWG P
Sbjct: 386 GWGGP 390
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 PQGGGG 6
PQGG G
Sbjct: 236 PQGGSG 241
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 GGGW 7
GGGW
Sbjct: 44 GGGW 47
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 1 PQGGGG 6
P GGGG
Sbjct: 73 PLGGGG 78
12|Sequence|56|65|GWGQPHGGGW
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 GWGQPHGGGW 10
G+ + HGG W
Sbjct: 407 GYRERHGGQW 416
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 GWGQPHGGGW 10
G+ HGG W
Sbjct: 406 GYRDRHGGAW 415
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 GWGQPHGGGW 10
G+ HGG W
Sbjct: 399 GYRDRHGGSW 408
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GWGQPHGGGW 10
G+ HGG W
Sbjct: 399 GYRDRHGGSW 408
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 GWGQPHGGGW 10
G+ HGG W
Sbjct: 399 GYRDRHGGSW 408
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 GWGQPHGGGW 10
G G PHG W
Sbjct: 184 GPGAPHGEAW 193
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 GWGQPHGGGW 10
G G PHG W
Sbjct: 185 GPGAPHGEAW 194
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 GWGQPHGGG 9
G GQP G G
Sbjct: 142 GRGQPLGAG 150
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QPHGGG 9
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QPHGGG 9
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 WGQPHGGGW 10
+ +P GGG+
Sbjct: 535 YTRPQGGGY 543
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 PHGGGW 10
PH G W
Sbjct: 401 PHEGAW 406
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 PHGGGW 10
PH G W
Sbjct: 401 PHEGAW 406
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 GWGQPHGGG 9
G GQP G G
Sbjct: 107 GRGQPLGAG 115
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 WGQPHGGGW 10
WG+ G W
Sbjct: 140 WGKESKGWW 148
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GWGQPHG 7
G G PHG
Sbjct: 665 GEGNPHG 671
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GWGQPHG 7
G G PHG
Sbjct: 665 GEGNPHG 671
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GWGQPHG 7
G G PHG
Sbjct: 665 GEGNPHG 671
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 GWGQPHG 7
G G PHG
Sbjct: 664 GEGNPHG 670
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 GWGQPHG 7
G G PHG
Sbjct: 663 GEGNPHG 669
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 5 PHGGGW 10
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 5 PHGGGW 10
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 5 PHGGGW 10
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 PHGGGW 10
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 PHGGGW 10
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 PHGGGW 10
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 GWGQPHGG 8
G+GQ H G
Sbjct: 178 GFGQRHKG 185
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 WGQPHGGG 9
W HG G
Sbjct: 161 WNTKHGSG 168
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 WGQPHGGG 9
W HG G
Sbjct: 161 WNTKHGSG 168
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 WGQPHGGGW 10
WG+ G W
Sbjct: 140 WGKESRGWW 148
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 GQPHG 7
G+PHG
Sbjct: 679 GKPHG 683
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 4 QPHGGGW 10
+P GG W
Sbjct: 101 EPGGGSW 107
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 GQPHG 7
G+PHG
Sbjct: 678 GKPHG 682
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 GQPHG 7
G+PHG
Sbjct: 679 GKPHG 683
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 GQPHG 7
G+PHG
Sbjct: 677 GKPHG 681
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 5 PHGGGW 10
P GG W
Sbjct: 70 PPGGAW 75
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 GQPHG 7
G+PHG
Sbjct: 677 GKPHG 681
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 GQPHG 7
G+PHG
Sbjct: 678 GKPHG 682
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 3 GQPHG 7
G+PHG
Sbjct: 345 GKPHG 349
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 GQPHGGG 9
GQP GG
Sbjct: 122 GQPFGGA 128
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 GQPHG 7
G PHG
Sbjct: 674 GDPHG 678
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 GQPHG 7
G PHG
Sbjct: 674 GDPHG 678
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 GWGQPHGGG 9
GW P G G
Sbjct: 1111 GWPSPPGKG 1119
13|Sequence|61|70|HGGGWGQPHG
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 GGGWG 6
GGGWG
Sbjct: 294 GGGWG 298
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 GGGWGQPH 9
GG GQPH
Sbjct: 269 AGGDGQPH 276
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 GGGWGQPH 9
GG GQPH
Sbjct: 269 AGGDGQPH 276
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 GGGWGQPHG 10
GG W P G
Sbjct: 1778 GGAWKSPEG 1786
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 GGGWGQPHG 10
GG W P G
Sbjct: 1748 GGAWKSPEG 1756
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 GGGWGQPH 9
G WGQ H
Sbjct: 14 GAAWGQVH 21
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 GGGWGQPH 9
G WGQ H
Sbjct: 14 GAAWGQVH 21
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 3 GGWGQPH 9
GG GQPH
Sbjct: 159 GGGGQPH 165
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 GGGWGQ 7
GG WG+
Sbjct: 1323 GGSWGE 1328
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 HGGGWGQP 8
GG W +P
Sbjct: 70 QGGTWSEP 77
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GGWGQPHG 10
GGW P G
Sbjct: 788 GGWCVPGG 795
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGWGQPHG 10
GGW P G
Sbjct: 788 GGWCVPGG 795
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GGWGQPHG 10
GGW P G
Sbjct: 788 GGWCVPGG 795
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 GGGWGQPH 9
G WGQ H
Sbjct: 14 GVAWGQVH 21
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 GGGW 5
GGGW
Sbjct: 550 GGGW 553
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GWGQP 8
GWG P
Sbjct: 386 GWGGP 390
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 HGGGWGQPHG 10
HG W + H
Sbjct: 933 HGQLWAETHA 942
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1144 YGGGW 1148
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GWGQP 8
GWG P
Sbjct: 386 GWGGP 390
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 HGGGWGQPHG 10
HG W + H
Sbjct: 933 HGMFWAEAHA 942
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 HGGGWGQPHG 10
HG W + H
Sbjct: 933 HGMFWAEAHA 942
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GWGQP 8
GWG P
Sbjct: 386 GWGGP 390
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 HGGGW 5
+GGGW
Sbjct: 1559 YGGGW 1563
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 HGGGW 5
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 GGGWGQPHG 10
GG W P G
Sbjct: 666 GGLWYHPEG 674
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 GGGWG 6
G GWG
Sbjct: 1021 GSGWG 1025
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGWGQP 8
G WG P
Sbjct: 47 GFWGSP 52
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 GGGWG 6
GG WG
Sbjct: 248 GGTWG 252
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GGWGQPHG 10
GG+G P G
Sbjct: 377 GGYGCPPG 384
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 HGGGWG 6
+GG WG
Sbjct: 1571 YGGAWG 1576
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GGGWGQPHG 10
GG W P G
Sbjct: 666 GGLWLHPEG 674
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GGGWGQPHG 10
GG W P G
Sbjct: 666 GGLWLHPEG 674
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GGWGQPHG 10
GG G+P G
Sbjct: 207 GGKGKPSG 214
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GGWGQPHG 10
GG G+P G
Sbjct: 207 GGKGKPSG 214
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGGW 5
GGGW
Sbjct: 44 GGGW 47
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GGWGQPHG 10
GG G+P G
Sbjct: 207 GGKGKPSG 214
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 GGGWG 6
GGGW
Sbjct: 213 GGGWA 217
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 GGGWG 6
G GWG
Sbjct: 1112 GSGWG 1116
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 GGGWG 6
G GWG
Sbjct: 1113 GSGWG 1117
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGGW 5
GGGW
Sbjct: 44 GGGW 47
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 1 HGGGWG 6
HG WG
Sbjct: 62 HGREWG 67
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 HGGGWG 6
HG WG
Sbjct: 62 HGREWG 67
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 HGGGWG 6
HG WG
Sbjct: 62 HGREWG 67
14|Sequence|66|75|GQPHGGGWGQ
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 5 GGGWG 9
GGGWG
Sbjct: 294 GGGWG 298
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 QPHGGGWGQ 10
QP G WGQ
Sbjct: 70 QPTGRSWGQ 78
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 1 GQPHGGGWGQ 10
G P GG GQ
Sbjct: 152 GDPENGGDGQ 161
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 HGGGW 8
HGG W
Sbjct: 411 HGGAW 415
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QPHGGGWGQ 10
QP G W Q
Sbjct: 70 QPEGRAWAQ 78
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QPHGGGWGQ 10
QP G W Q
Sbjct: 70 QPEGRAWAQ 78
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QPHGGGWGQ 10
QP G W Q
Sbjct: 70 QPEGRAWAQ 78
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 4 HGGGW 8
HGG W
Sbjct: 404 HGGSW 408
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 HGGGW 8
HGG W
Sbjct: 404 HGGSW 408
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 HGGGW 8
HGG W
Sbjct: 404 HGGSW 408
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 GGGWGQ 10
GG WG+
Sbjct: 1323 GGSWGE 1328
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QPHGGG 7
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QPHGGG 7
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PHGGGW 8
PH G W
Sbjct: 401 PHEGAW 406
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PHGGGW 8
PH G W
Sbjct: 401 PHEGAW 406
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 1 GQPHGGGW 8
G PHG W
Sbjct: 186 GAPHGEAW 193
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 1 GQPHGGGW 8
G PHG W
Sbjct: 187 GAPHGEAW 194
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 QPHGGGWGQ 10
+P G WGQ
Sbjct: 70 RPTGRSWGQ 78
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 QPHGGGWGQ 10
QP G W Q
Sbjct: 70 QPQGRHWAQ 78
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 HGGGW 8
HGG W
Sbjct: 412 HGGQW 416
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 QPHGGGWGQ 10
QP G W Q
Sbjct: 70 QPQGRHWAQ 78
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 1 GQPHGGGWGQ 10
G P GG GQ
Sbjct: 154 GVPENGGDGQ 163
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 5 GGGW 8
GGGW
Sbjct: 550 GGGW 553
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 1 GQPHGGGWGQ 10
G P GG GQ
Sbjct: 154 GVPENGGDGQ 163
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QPHGGGW 8
+P GGG+
Sbjct: 537 RPQGGGY 543
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 PHGGGW 8
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 PHGGGW 8
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PHGGGW 8
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 3 PHGGGW 8
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 3 PHGGGW 8
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 3 PHGGGW 8
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 3 PHGGGW 8
P GG W
Sbjct: 70 PPGGAW 75
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 QPHGGGW 8
+P GG W
Sbjct: 101 EPGGGSW 107
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 1 GQPHGGGWGQ 10
GQP GG G+
Sbjct: 63 GQPDGGAPGE 72
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 QPHGGGWG 9
Q GG WG
Sbjct: 245 QVSGGTWG 252
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 GQPHGGG 7
GQP G G
Sbjct: 144 GQPLGAG 150
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1144 YGGGW 1148
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 HGGGW 8
+GGGW
Sbjct: 1559 YGGGW 1563
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 3 PHGGGWGQ 10
P G WGQ
Sbjct: 190 PMGEYWGQ 197
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 GQPHG 5
G+PHG
Sbjct: 679 GKPHG 683
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PHGGGWGQ 10
PH GWG+
Sbjct: 439 PHYPGWGR 446
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PHGGGWGQ 10
PH GWG+
Sbjct: 439 PHYPGWGR 446
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 GQPHG 5
G+PHG
Sbjct: 679 GKPHG 683
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 GQPHG 5
G+PHG
Sbjct: 678 GKPHG 682
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 HGGGW 8
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 GQPHGGG 7
GQP GG
Sbjct: 122 GQPFGGA 128
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 GQPHG 5
G+PHG
Sbjct: 677 GKPHG 681
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 5 GGGWG 9
G GWG
Sbjct: 1021 GSGWG 1025
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 GQPHG 5
G+PHG
Sbjct: 345 GKPHG 349
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 GQPHG 5
G+PHG
Sbjct: 677 GKPHG 681
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 PHGGGWG 9
P GGG+G
Sbjct: 105 PGGGGFG 111
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 1 GQPHG 5
G+PHG
Sbjct: 678 GKPHG 682
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 1 GQPHGGGWG 9
+ HG WG
Sbjct: 59 AKAHGREWG 67
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 GQPHGGGWG 9
+ HG WG
Sbjct: 59 AKAHGREWG 67
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 GQPHGGGWG 9
+ HG WG
Sbjct: 59 AKAHGREWG 67
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GGGW 8
GGGW
Sbjct: 44 GGGW 47
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QPHGGGWGQ 10
+P G W Q
Sbjct: 70 RPEGRAWAQ 78
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 GQPHGGG 7
GQP G G
Sbjct: 109 GQPLGAG 115
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 GQPHG 5
G PHG
Sbjct: 674 GDPHG 678
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QPHGGGWGQ 10
+P G W Q
Sbjct: 70 RPEGRAWAQ 78
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 HGGGWG 9
+GG WG
Sbjct: 1571 YGGAWG 1576
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 5 GGGWG 9
GGGW
Sbjct: 213 GGGWA 217
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 GGGW 8
GGGW
Sbjct: 44 GGGW 47
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 GQPHG 5
G PHG
Sbjct: 674 GDPHG 678
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 HGGGW 8
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 HGGGW 8
HGG W
Sbjct: 301 HGGTW 305
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 GQPHG 5
G PHG
Sbjct: 665 GDPHG 669
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 HGGGW 8
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 HGGGW 8
HGG W
Sbjct: 301 HGGTW 305
15|Sequence|71|80|GGWGQPHGGG
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 2 GWGQPHGGG 10
G GQP G G
Sbjct: 142 GRGQPLGAG 150
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 QPHGGG 10
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 QPHGGG 10
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 2 GWGQPHGGG 10
G GQP G G
Sbjct: 107 GRGQPLGAG 115
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GGWGQPHG 8
GGW P G
Sbjct: 788 GGWCVPGG 795
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGWGQPHG 8
GGW P G
Sbjct: 788 GGWCVPGG 795
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GGWGQPHG 8
GGW P G
Sbjct: 788 GGWCVPGG 795
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GWGQPHG 8
G G PHG
Sbjct: 665 GEGNPHG 671
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GWGQPHG 8
G G PHG
Sbjct: 665 GEGNPHG 671
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GWGQPHG 8
G G PHG
Sbjct: 665 GEGNPHG 671
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GWGQPHG 8
G G PHG
Sbjct: 664 GEGNPHG 670
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 GWGQPHG 8
G G PHG
Sbjct: 663 GEGNPHG 669
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 GWGQPHGG 9
G+GQ H G
Sbjct: 178 GFGQRHKG 185
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 WGQPHGGG 10
W HG G
Sbjct: 161 WNTKHGSG 168
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 WGQPHGGG 10
W HG G
Sbjct: 161 WNTKHGSG 168
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 4 GQPHGGG 10
GQP GG
Sbjct: 122 GQPFGGA 128
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 4 GQPHG 8
G+PHG
Sbjct: 679 GKPHG 683
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GWGQP 6
GWG P
Sbjct: 386 GWGGP 390
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GWGQP 6
GWG P
Sbjct: 386 GWGGP 390
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 4 GQPHG 8
G+PHG
Sbjct: 679 GKPHG 683
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GWGQP 6
GWG P
Sbjct: 386 GWGGP 390
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 GGWGQPHGGG 10
GGW +GG
Sbjct: 391 GGWPIMNGGA 400
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 4 GQPHG 8
G+PHG
Sbjct: 678 GKPHG 682
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 4 GQPHG 8
G+PHG
Sbjct: 677 GKPHG 681
>sp|UL110_HCMVA|UNCHARACTERIZED protein UL110|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGWGQP 6
G WG P
Sbjct: 47 GFWGSP 52
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 4 GQPHG 8
G+PHG
Sbjct: 677 GKPHG 681
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 4 GQPHG 8
G+PHG
Sbjct: 345 GKPHG 349
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 4 GQPHG 8
G+PHG
Sbjct: 678 GKPHG 682
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 GGWGQPHG 8
G W P G
Sbjct: 1779 GAWKSPEG 1786
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GGWGQPHG 8
GG+G P G
Sbjct: 377 GGYGCPPG 384
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 GQPHG 8
G PHG
Sbjct: 674 GDPHG 678
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GWGQPHGGG 10
GW P G G
Sbjct: 1111 GWPSPPGKG 1119
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 GGWGQPH 7
WGQ H
Sbjct: 15 AAWGQVH 21
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 GGWGQPH 7
WGQ H
Sbjct: 15 AAWGQVH 21
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 GGWGQPHG 8
G W P G
Sbjct: 1749 GAWKSPEG 1756
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 GQPHG 8
G PHG
Sbjct: 674 GDPHG 678
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 GWGQPH 7
WGQ H
Sbjct: 16 AWGQVH 21
16|Sequence|76|85|PHGGGWGQPH
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 3 GGGWG 7
GGGWG
Sbjct: 294 GGGWG 298
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PHGGGWGQP 9
P G WGQP
Sbjct: 71 PTGRSWGQP 79
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PHGGGWGQP 9
P G WGQP
Sbjct: 71 PTGRSWGQP 79
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 3 GGGWGQPH 10
GG GQPH
Sbjct: 269 AGGDGQPH 276
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 3 GGGWGQPH 10
GG GQPH
Sbjct: 269 AGGDGQPH 276
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRSWAQP 79
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 1 PHGGGWGQP 9
PHG QP
Sbjct: 191 PHGNKMSQP 199
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRSWAQP 79
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRSWAQP 79
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 HGGGW 6
HGG W
Sbjct: 411 HGGAW 415
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PHGGGWGQP 9
PH GW P
Sbjct: 5004 PHLMGWDYP 5012
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PHGGGWGQP 9
PH GW P
Sbjct: 4981 PHLMGWDYP 4989
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 PHGGGWGQP 9
PH GW P
Sbjct: 4990 PHLMGWDYP 4998
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 HGGGW 6
HGG W
Sbjct: 404 HGGSW 408
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 HGGGW 6
HGG W
Sbjct: 404 HGGSW 408
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 HGGGW 6
HGG W
Sbjct: 404 HGGSW 408
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRTWAQP 79
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 3 GGGWGQPH 10
G WGQ H
Sbjct: 14 GAAWGQVH 21
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 3 GGGWGQPH 10
G WGQ H
Sbjct: 14 GAAWGQVH 21
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 GGGWGQ 8
GG WG+
Sbjct: 1323 GGSWGE 1328
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PHGGGWGQPH 10
P GG W PH
Sbjct: 70 PPGGAW-TPH 78
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PQGRHWAQP 79
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRTWAQP 79
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRAWAQP 79
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PQGRHWAQP 79
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRTWAQP 79
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRTWAQP 79
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PEGRTWAQP 79
>sp|SCP_EBVB9|SMALL capsomere-interacting protein|Epstein-Barr virus (strain B95-8)
Query: 4 GGWGQPH 10
GG GQPH
Sbjct: 159 GGGGQPH 165
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 HGGGW 6
HGG W
Sbjct: 412 HGGQW 416
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 GGGW 6
GGGW
Sbjct: 550 GGGW 553
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PHGGGWGQP 9
P G W QP
Sbjct: 71 PKGRNWAQP 79
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 PHGGGW 6
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 PHGGGW 6
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 PHGGGW 6
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 PHGGGW 6
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 PHGGGW 6
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 PHGGGW 6
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PHGGGWGQP 9
P GWG P
Sbjct: 382 PCFSGWGGP 390
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1144 YGGGW 1148
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PHGGGWGQP 9
P GWG P
Sbjct: 382 PCFSGWGGP 390
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 HGGGW 6
+GGGW
Sbjct: 1559 YGGGW 1563
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PHGGGWGQP 9
P GWG P
Sbjct: 382 PCFSGWGGP 390
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PHGGGW 6
PH G W
Sbjct: 401 PHEGAW 406
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PHGGGW 6
PH G W
Sbjct: 401 PHEGAW 406
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 HGGGWGQP 9
GG W +P
Sbjct: 70 QGGTWSEP 77
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PHGGGWGQ 8
PH GWG+
Sbjct: 439 PHYPGWGR 446
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 HGGGW 6
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PHGGGWGQ 8
PH GWG+
Sbjct: 439 PHYPGWGR 446
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain
Query: 1 PHGGGWGQP 9
P G G G P
Sbjct: 29 PRGAGRGPP 37
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 1 PHGGGWGQP 9
PH G G P
Sbjct: 317 PHNKGTGAP 325
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 PHGGGWGQP 9
P G G G P
Sbjct: 29 PRGAGRGPP 37
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 PHGGGWGQP 9
P G G G P
Sbjct: 29 PRGAGRGPP 37
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 HGGGWGQPH 10
HG W + H
Sbjct: 933 HGQLWAETH 941
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 3 GGGWGQPH 10
G WGQ H
Sbjct: 14 GVAWGQVH 21
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 2 HGGGWGQPH 10
HG W + H
Sbjct: 933 HGMFWAEAH 941
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 PHGGGWGQ 8
P G WGQ
Sbjct: 190 PMGEYWGQ 197
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 HGGGWG 7
+GG WG
Sbjct: 1571 YGGAWG 1576
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 HGGGWGQPH 10
HG W + H
Sbjct: 933 HGMFWAEAH 941
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 GGGWG 7
GGGW
Sbjct: 213 GGGWA 217
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 PHGGGWG 7
P GGG+G
Sbjct: 105 PGGGGFG 111
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 GGGWG 7
G GWG
Sbjct: 1021 GSGWG 1025
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 HGGGW 6
HGG W
Sbjct: 301 HGGTW 305
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PHGGGW 6
P GGG+
Sbjct: 538 PQGGGY 543
17|Sequence|81|90|WGQPHGGGWG
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 6 GGGWG 10
GGGWG
Sbjct: 294 GGGWG 298
>sp|ICP27_HHV1E|MRNA export factor|Human herpesvirus 1 (strain HFEM)
Query: 2 GQPHGGGW 9
G PHG W
Sbjct: 186 GAPHGEAW 193
>sp|ICP27_HHV11|MRNA export factor|Human herpesvirus 1 (strain 17)
Query: 2 GQPHGGGW 9
G PHG W
Sbjct: 187 GAPHGEAW 194
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 5 HGGGW 9
HGG W
Sbjct: 411 HGGAW 415
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 5 HGGGW 9
HGG W
Sbjct: 404 HGGSW 408
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 HGGGW 9
HGG W
Sbjct: 404 HGGSW 408
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 HGGGW 9
HGG W
Sbjct: 404 HGGSW 408
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 QPHGGG 8
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 QPHGGG 8
Q HGGG
Sbjct: 509 QAHGGG 514
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WGQPHGGGW 9
+ +P GGG+
Sbjct: 535 YTRPQGGGY 543
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PHGGGW 9
PH G W
Sbjct: 401 PHEGAW 406
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PHGGGW 9
PH G W
Sbjct: 401 PHEGAW 406
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 WGQPHGGGW 9
WG+ G W
Sbjct: 140 WGKESKGWW 148
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 HGGGW 9
HGG W
Sbjct: 412 HGGQW 416
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 6 GGGW 9
GGGW
Sbjct: 550 GGGW 553
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 3 QPHGGGWG 10
Q GG WG
Sbjct: 245 QVSGGTWG 252
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 PHGGGW 9
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 PHGGGW 9
PH GW
Sbjct: 1417 PHLSGW 1422
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 PHGGGW 9
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 PHGGGW 9
PH GW
Sbjct: 1416 PHLSGW 1421
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 PHGGGW 9
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 PHGGGW 9
PH GW
Sbjct: 1415 PHLSGW 1420
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 PHGGGWG 10
PH GWG
Sbjct: 439 PHYPGWG 445
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 PHGGGWG 10
PH GWG
Sbjct: 439 PHYPGWG 445
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 WGQPHGGGW 9
WG+ G W
Sbjct: 140 WGKESRGWW 148
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 2 GQPHGGG 8
GQP G G
Sbjct: 144 GQPLGAG 150
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 GQPHG 6
G+PHG
Sbjct: 679 GKPHG 683
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 QPHGGGWG 10
QP G WG
Sbjct: 70 QPTGRSWG 77
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 1 WGQPHGGGWG 10
+GQ G WG
Sbjct: 948 FGQLSSGSWG 957
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 3 QPHGGGW 9
+P GG W
Sbjct: 101 EPGGGSW 107
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 GQPHG 6
G+PHG
Sbjct: 678 GKPHG 682
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 GQPHG 6
G+PHG
Sbjct: 679 GKPHG 683
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 GQPHG 6
G+PHG
Sbjct: 677 GKPHG 681
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 4 PHGGGW 9
P GG W
Sbjct: 70 PPGGAW 75
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 GQPHG 6
G+PHG
Sbjct: 677 GKPHG 681
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1144 YGGGW 1148
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 GQPHGGGWG 10
GQP GG G
Sbjct: 63 GQPDGGAPG 71
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 2 GQPHG 6
G+PHG
Sbjct: 678 GKPHG 682
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 2 GQPHG 6
G+PHG
Sbjct: 345 GKPHG 349
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 2 GQPHGGGWG 10
+ HG WG
Sbjct: 59 AKAHGREWG 67
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 2 GQPHGGGWG 10
+ HG WG
Sbjct: 59 AKAHGREWG 67
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 2 GQPHGGGWG 10
+ HG WG
Sbjct: 59 AKAHGREWG 67
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 5 HGGGW 9
+GGGW
Sbjct: 1559 YGGGW 1563
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1553 YGGGW 1557
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 GQPHGGG 8
GQP GG
Sbjct: 122 GQPFGGA 128
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 GQPHG 6
G PHG
Sbjct: 674 GDPHG 678
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1554 YGGGW 1558
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 2 GQPHGGG 8
GQP G G
Sbjct: 109 GQPLGAG 115
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 HGGGW 9
+GGGW
Sbjct: 1552 YGGGW 1556
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 GQPHG 6
G PHG
Sbjct: 674 GDPHG 678
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 6 GGGWG 10
GGGW
Sbjct: 213 GGGWA 217
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 GGGW 9
GGGW
Sbjct: 44 GGGW 47
18|Sequence|86|95|GGGWGQGGGT
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 2 GGWGQGGGT 10
G W Q GGT
Sbjct: 118 GNWAQAGGT 126
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 GGGWG 5
GGGWG
Sbjct: 294 GGGWG 298
>sp|VE6_HPV41|PROTEIN E6|Human papillomavirus type 41
Query: 4 WGQGGGT 10
WG+GG T
Sbjct: 66 WGEGGPT 72
>sp|GL_HHV2H|ENVELOPE glycoprotein L|Human herpesvirus 2 (strain HG52)
Query: 2 GGWGQGGGT 10
G WG GG+
Sbjct: 13 GAWGAWGGS 21
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 2 GGWGQGGG 9
G W Q GG
Sbjct: 118 GNWAQTGG 125
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GWGQGGGT 10
GWG G T
Sbjct: 2019 GWGNGAPT 2026
Query: 2 GGWGQ 6
G WGQ
Sbjct: 4 GDWGQ 8
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 GWGQGGGT 10
GWG G T
Sbjct: 1992 GWGNGAPT 1999
Query: 2 GGWGQGGGT 10
G WGQ T
Sbjct: 4 GDWGQSQRT 12
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 GWGQGGGT 10
GWG G T
Sbjct: 1997 GWGNGAPT 2004
Query: 2 GGWGQGGGT 10
G WGQ T
Sbjct: 4 GDWGQSQRT 12
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 980 GAWGSGVG 987
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 981 GAWGSGVG 988
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 981 GAWGSGVG 988
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 981 GAWGSGVG 988
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 980 GAWGSGVG 987
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 986 GAWGSGVG 993
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 990 GAWGSGVG 997
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 979 GAWGSGVG 986
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 979 GAWGSGVG 986
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 979 GAWGSGVG 986
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 985 GAWGSGVG 992
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 983 GAWGSGVG 990
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 1 GGGWGQGG 8
G WG+GG
Sbjct: 728 AGVWGEGG 735
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 GGGWGQ 6
GG WG+
Sbjct: 1323 GGSWGE 1328
Query: 4 WGQGGGT 10
W GGG+
Sbjct: 1319 WRNGGGS 1325
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 990 GAWGSGVG 997
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 990 GAWGSGVG 997
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 990 GAWGSGVG 997
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 GGGWGQG 7
GGGW G
Sbjct: 213 GGGWANG 219
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 984 GAWGSGVG 991
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 984 GAWGSGVG 991
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 GGWGQGG 8
G WG+GG
Sbjct: 731 GVWGEGG 737
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 4 WGQGG 8
WG+GG
Sbjct: 214 WGRGG 218
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 1 GGG-----WGQGGGT 10
GGG WGQ GT
Sbjct: 251 GGGSWREDWGQLSGT 265
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 WGQGG 8
WG GG
Sbjct: 369 WGDGG 373
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 WGQGG 8
WG GG
Sbjct: 369 WGDGG 373
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 1 GGG-----WGQGGGT 10
GGG WGQ GT
Sbjct: 251 GGGSWREDWGQLSGT 265
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GGGW 4
GGGW
Sbjct: 44 GGGW 47
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 100 GWGNGCG 106
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 380 GWGNGCG 386
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 1 GGG-----WGQGGGT 10
GGG WGQ GT
Sbjct: 251 GGGSWWEDWGQLSGT 265
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 1 GGG-----WGQGGGT 10
GGG WGQ GT
Sbjct: 251 GGGSWREDWGQLSGT 265
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 1 GGG-----WGQGGGT 10
GGG WGQ GT
Sbjct: 251 GGGSWREDWGQLSGT 265
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 4 WGQGG 8
WG+GG
Sbjct: 214 WGKGG 218
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 392 GWGNGCG 398
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 372 GWGNGCG 378
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 3 GWGQGG 8
GW +GG
Sbjct: 651 GWMEGG 656
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GGGW 4
GGGW
Sbjct: 44 GGGW 47
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 385 GWGNGCG 391
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 4 WGQGG 8
WG+GG
Sbjct: 214 WGKGG 218
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 385 GWGNGCG 391
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 390 GWGNGCG 396
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 385 GWGNGCG 391
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 385 GWGNGCG 391
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 GGGWG 5
G GWG
Sbjct: 1021 GSGWG 1025
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GGWGQGGG 9
GGW GG
Sbjct: 788 GGWCVPGG 795
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GGWGQGGG 9
GGW GG
Sbjct: 788 GGWCVPGG 795
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GGWGQGGG 9
GGW GG
Sbjct: 788 GGWCVPGG 795
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 385 GWGNGCG 391
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 385 GWGNGCG 391
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 3 GWGQGG 8
GW +GG
Sbjct: 651 GWMEGG 656
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 390 GWGNGCG 396
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 390 GWGNGCG 396
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 390 GWGNGCG 396
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 386 GWGNGCG 392
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 3 GWGQGGG 9
GWG G G
Sbjct: 322 GWGNGCG 328
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 1 GGGWGQGG 8
G W GG
Sbjct: 229 GDSWASGG 236
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 GGGWGQGG 8
G W GG
Sbjct: 229 GDSWASGG 236
>sp|NEF_HV2RO|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 GGGWGQGGG 9
GG W + GG
Sbjct: 29 GGYWNESGG 37
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 175 GAWGSGVG 182
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 2 GGWGQGGG 9
G WG G G
Sbjct: 78 GAWGSGVG 85
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 GGWGQGGG 9
G W GG
Sbjct: 118 GSWALAGG 125
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 1 GGGWGQG 7
GG WG G
Sbjct: 36 GGWWGPG 42
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 GGGWG 5
G GWG
Sbjct: 1113 GSGWG 1117
19|Sequence|91|100|QGGGTHSQWN
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QGGGTHSQ 8
QGG +H Q
Sbjct: 244 QGGSSHQQ 251
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QGGGTHSQ 8
QGG +H Q
Sbjct: 244 QGGSSHQQ 251
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QGGGTHSQ 8
QGG +H Q
Sbjct: 244 QGGSSHQQ 251
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 5 THSQWN 10
THS WN
Sbjct: 416 THSMWN 421
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 1 QGGGTHSQWN 10
+GGG HS N
Sbjct: 256 RGGGLHSTTN 265
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 6 HSQWN 10
HS+WN
Sbjct: 362 HSKWN 366
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 6 HSQWN 10
HS+WN
Sbjct: 362 HSKWN 366
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 GGGTHSQWN 10
GG HSQ N
Sbjct: 171 GGYAHSQTN 179
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 GGGTHSQWN 10
GG HSQ N
Sbjct: 171 GGYAHSQTN 179
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 QGGGTHSQWN 10
QGG H+ W+
Sbjct: 1528 QGGVFHTMWH 1537
>sp|VPU_HV1C4|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 4 GTHSQWN 10
G H+ WN
Sbjct: 71 GHHAPWN 77
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 3 GGTHSQW 9
GG HS+W
Sbjct: 218 GGRHSRW 224
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 6 HSQW 9
HSQW
Sbjct: 234 HSQW 237
>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58
Query: 1 QGGGTHSQWN 10
+GGG HS N
Sbjct: 69 RGGGLHSTTN 78
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 QGGGTHSQWN 10
+GG +SQ+N
Sbjct: 221 RGGKFYSQFN 230
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 QGGGTHSQW 9
QGG QW
Sbjct: 864 QGGLIFKQW 872
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 QGGGTHSQW 9
QGG QW
Sbjct: 864 QGGLIFKQW 872
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 QGGGTHSQW 9
QGG QW
Sbjct: 864 QGGLIFKQW 872
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 QGGGTHSQW 9
QGG QW
Sbjct: 864 QGGLIFKQW 872
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 4 GTHSQWN 10
TH+ WN
Sbjct: 1013 ATHTLWN 1019
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 4 GTHSQWN 10
GT+ QW+
Sbjct: 218 GTNIQWS 224
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 GTHSQWN 10
GT+ QW+
Sbjct: 218 GTNIQWS 224
20|Sequence|96|105|HSQWNKPSKP
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1757 QWMRPSK 1763
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1802 EWGKPNVP 1809
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1750 QWMRPSK 1756
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1803 EWGKPNVP 1810
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1802 EWGKPNVP 1809
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1749 QWMRPSK 1755
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1750 QWMRPSK 1756
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1752 QWMRPSK 1758
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1752 QWMRPSK 1758
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1803 EWGKPNVP 1810
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1803 EWGKPNIP 1810
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1802 EWGKPNIP 1809
>sp|FUS_MUMPZ|FUSION glycoprotein F0|Mumps virus genotype N (strain
Query: 1 HSQWNKPSK 9
+ QW+ P+K
Sbjct: 314 NEQWSYPAK 322
>sp|FUS_MUMPR|FUSION glycoprotein F0|Mumps virus (strain RW) (MuV)
Query: 1 HSQWNKPSK 9
+ QW+ P+K
Sbjct: 314 NEQWSYPAK 322
>sp|FUS_MUMPM|FUSION glycoprotein F0|Mumps virus genotype B (strain
Query: 1 HSQWNKPSK 9
+ QW+ P+K
Sbjct: 314 NEQWSYPAK 322
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 4 WNKPSKP 10
W PSKP
Sbjct: 161 WGAPSKP 167
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1802 EWGKPNIP 1809
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 QWNKPSKP 10
+W KP+ P
Sbjct: 1802 EWGKPNIP 1809
>sp|VIF_HV1SC|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 90 RWNKPQK 96
>sp|VIF_HV1JR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSKP 10
+WNKP K
Sbjct: 173 RWNKPQKT 180
>sp|VIF_HV1MN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1U4|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1SE|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1OY|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 QWNKPSK 9
QW +PSK
Sbjct: 1749 QWMRPSK 1755
>sp|VIF_HV1ET|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSKP 10
+WNKP K
Sbjct: 173 KWNKPQKT 180
>sp|VIF_HV1B9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1Z6|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1Z2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1V9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV196|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1S9|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 SQWNKPSK 9
+WNKP K
Sbjct: 172 DRWNKPQK 179
>sp|VIF_HV1ND|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV197|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1N5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 SQWNKPSK 9
+WNKP K
Sbjct: 172 DRWNKPQK 179
>sp|FUS_MUMPS|FUSION glycoprotein F0|Mumps virus (strain SBL) (MuV)
Query: 1 HSQWNKPSK 9
+ QW P+K
Sbjct: 314 NEQWRYPAK 322
>sp|FUS_MUMP1|FUSION glycoprotein F0|Mumps virus (strain SBL-1) (MuV)
Query: 1 HSQWNKPSK 9
+ QW P+K
Sbjct: 314 NEQWRYPAK 322
>sp|VIF_HV1S2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 SQWNKPSK 9
+WNKP K
Sbjct: 172 DRWNKPQK 179
>sp|VIF_HV1A2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV1RH|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV19N|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|E4RF5_ADE02|EARLY 4 ORF6/7 control protein|Human adenovirus C serotype 2
Query: 1 HSQWNKPSKP 10
H+ W PS P
Sbjct: 57 HNAWTSPSPP 66
>sp|FUS_MUMPK|FUSION glycoprotein F0|Mumps virus (strain Kilham) (MuV)
Query: 1 HSQWNKPSK 9
+ QW P+K
Sbjct: 314 NEQWRYPAK 322
>sp|VIF_HV192|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QWNKPSK 9
+WNKP K
Sbjct: 173 RWNKPQK 179
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 1 HSQWNKPS 8
H Q+++PS
Sbjct: 229 HCQFSRPS 236
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 HSQWNKPS 8
H Q+++PS
Sbjct: 230 HCQFSRPS 237
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 QWNKPSK 9
QW KP+K
Sbjct: 1735 QWMKPNK 1741
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 4 WNKPSKP 10
W+K SKP
Sbjct: 147 WDKNSKP 153
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 NKPSKP 10
N+P+KP
Sbjct: 1751 NQPTKP 1756
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 QWNKPSK 9
QW KP+K
Sbjct: 1735 QWVKPNK 1741
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 QWNKPSK 9
QW KP+K
Sbjct: 1735 QWVKPNK 1741
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1764 SIWEKPS 1770
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 SQWNKPS 8
S W KPS
Sbjct: 1763 SIWEKPS 1769
21|Sequence|101|110|KPSKPKTNMK
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PSKPKTNMK 10
P KP TN++
Sbjct: 1572 PGKPATNVQ 1580
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 4 KPKTNMK 10
KP TNMK
Sbjct: 216 KPATNMK 222
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 KPSKPKTN 8
KP+KP+ N
Sbjct: 798 KPTKPQKN 805
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 2 PSKPKTN 8
P KPK N
Sbjct: 983 PGKPKKN 989
>sp|UL131_HCMVA|UNCHARACTERIZED protein UL131|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PSKPKTNM 9
P+KP T+M
Sbjct: 61 PTKPVTSM 68
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 KPSKPKTN 8
KP+KP+ N
Sbjct: 798 KPTKPQKN 805
22|Sequence|106|115|KTNMKHMAGA
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TNMKHMAGA 10
T +KH+AGA
Sbjct: 927 TLVKHLAGA 935
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 TNMKHMAGA 10
T HMAGA
Sbjct: 500 TYYTHMAGA 508
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TNMKHMAGA 10
T ++H+AGA
Sbjct: 927 TLVRHLAGA 935
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 TNMKHMA 8
TN+ HMA
Sbjct: 373 TNVMHMA 379
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 KTNMKH 6
KTN KH
Sbjct: 149 KTNTKH 154
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KTNMKH 6
KTN KH
Sbjct: 149 KTNTKH 154
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 KTNMKH 6
KTN KH
Sbjct: 149 KTNTKH 154
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 KTNMKH 6
KTN KH
Sbjct: 149 KTNTKH 154
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KTNMKH 6
KTN KH
Sbjct: 149 KTNTKH 154
>sp|TRX2_VZVD|TRIPLEX capsid protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 KTNMKHMAGA 10
+TN++H G+
Sbjct: 188 ETNLQHRDGS 197
23|Sequence|111|120|HMAGAAAAGA
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 1 HMAGAAAAGA 10
+AGAA+AGA
Sbjct: 212 KLAGAASAGA 221
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 HMAGAAAAG 9
H+AG A+G
Sbjct: 14 HIAGQDASG 22
24|Sequence|116|125|AAAGAVVGGL
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 AAGAVVGGL 10
A GA++GGL
Sbjct: 172 AIGALIGGL 180
>sp|ORF1_HPBVH|UNCHARACTERIZED ORF1 protein|Human picobirnavirus (strain
Query: 3 AGAVVGGL 10
AGA GGL
Sbjct: 216 AGAFAGGL 223
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 AAAGAVVGG 9
A AG+ +GG
Sbjct: 513 ATAGSAMGG 521
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 3 AGAVVG 8
AGA+VG
Sbjct: 153 AGAIVG 158
25|Sequence|121|130|VVGGLGGYML
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 558 IVGGIGGFI 566
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 558 IVGGIGGFI 566
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 557 IVGGIGGFI 565
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 559 IVGGIGGFI 567
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 556 IVGGIGGFI 564
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 558 IVGGIGGFI 566
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 559 IVGGIGGFI 567
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 556 IVGGIGGFI 564
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 558 IVGGIGGFI 566
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 557 IVGGIGGFI 565
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 558 IVGGIGGFI 566
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VVGGLGGYM 9
+VGG+GG++
Sbjct: 558 IVGGIGGFI 566
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 456 VEAGIGGYLL 465
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 450 VEAGIGGYLL 459
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 450 VEAGIGGYLL 459
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 450 VEAGIGGYLL 459
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 450 VEAGIGGYLL 459
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 450 VEAGIGGYLL 459
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 456 VEAGIGGYLL 465
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 449 VEAGIGGYLL 458
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 449 VEAGIGGYLL 458
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 449 VEAGIGGYLL 458
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 449 VEAGIGGYLL 458
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 450 VEAGIGGYLL 459
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 463 VEAGIGGYLL 472
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 VVGGLGGYML 10
V G+GGY+L
Sbjct: 462 VEAGIGGYLL 471
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 VVGGLGGYML 10
V GG GGY L
Sbjct: 35 VPGGTGGYYL 44
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 VVGGLGGYML 10
V GGLGG L
Sbjct: 1228 VAGGLGGLTL 1237
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 VVGGLGGYML 10
V GGLGG L
Sbjct: 1228 VAGGLGGLTL 1237
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 535 MIGGIGGFI 543
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1337 GGIGGY 1342
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 544 MIGGIGGFI 552
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1346 GGIGGY 1351
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 544 MIGGIGGFI 552
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 528 MIGGIGGFI 536
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1331 GGIGGY 1336
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 535 MIGGIGGFI 543
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1337 GGIGGY 1342
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 532 MIGGIGGFI 540
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1334 GGIGGY 1339
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 531 MIGGIGGFI 539
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1333 GGIGGY 1338
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 531 MIGGIGGFI 539
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1333 GGIGGY 1338
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 535 MIGGIGGFI 543
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1337 GGIGGY 1342
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 533 MIGGIGGFI 541
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1335 GGIGGY 1340
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 531 MIGGIGGFI 539
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1333 GGIGGY 1338
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 535 MIGGIGGFI 543
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1337 GGIGGY 1342
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 529 MIGGIGGFI 537
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1331 GGIGGY 1336
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 540 MIGGIGGFI 548
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1342 GGIGGY 1347
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 539 MIGGIGGFI 547
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1341 GGIGGY 1346
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 533 MIGGIGGFI 541
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1335 GGIGGY 1340
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 538 MIGGIGGFI 546
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1340 GGIGGY 1345
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 538 MIGGIGGFI 546
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1340 GGIGGY 1345
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 4 GLGGY 8
G+GGY
Sbjct: 1337 GIGGY 1341
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 546 MIGGIGGFI 554
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1348 GGIGGY 1353
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 546 MIGGIGGFI 554
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1348 GGIGGY 1353
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 546 MIGGIGGFI 554
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1348 GGIGGY 1353
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 533 MIGGIGGFI 541
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1335 GGIGGY 1340
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 536 MIGGIGGFI 544
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1338 GGIGGY 1343
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 529 MIGGIGGFI 537
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1331 GGIGGY 1336
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 529 MIGGIGGFI 537
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1331 GGIGGY 1336
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 529 MIGGIGGFI 537
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1331 GGIGGY 1336
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 530 MIGGIGGFI 538
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1332 GGIGGY 1337
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VVGGLGGYM 9
++GG+GG++
Sbjct: 534 MIGGIGGFI 542
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1336 GGIGGY 1341
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 GLGGYML 10
G+GGY+L
Sbjct: 466 GIGGYLL 472
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 4 GLGGYML 10
G+GGY+L
Sbjct: 453 GIGGYLL 459
>sp|POL_HV1Z6|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 49 GGIGGY 54
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 GGLGGY 8
GG+GGY
Sbjct: 1329 GGIGGY 1334
>sp|NEC1_VZVD|NUCLEAR egress protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 GLGGY 8
GLGGY
Sbjct: 139 GLGGY 143
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VGGLGGYM 9
+GG+G Y+
Sbjct: 328 MGGMGNYI 335
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 3 GGLGGY 8
GG GGY
Sbjct: 157 GGSGGY 162
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 3 GGLGGY 8
GG GGY
Sbjct: 157 GGSGGY 162
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 VGGLGGYML 10
+GG GG+++
Sbjct: 111 LGGTGGHII 119
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 2 VGGLGGYML 10
+GG GG+++
Sbjct: 111 LGGTGGHII 119
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 GLGGYML 10
G+GGY+
Sbjct: 1900 GVGGYIF 1906
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 GLGGYML 10
G+GGY+
Sbjct: 1902 GVGGYIF 1908
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 200 LGGIGGTSL 208
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 250 LGGIGGTSL 258
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 250 LGGIGGTSL 258
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 VVGGLGG 7
V+GGLG
Sbjct: 1045 VLGGLGA 1051
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 VVGGLGG 7
V+GGLG
Sbjct: 1045 VLGGLGA 1051
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 250 LGGIGGTSL 258
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 250 LGGIGGTSL 258
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 250 LGGIGGTSL 258
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 2 VGGLGGYML 10
+GG+GG L
Sbjct: 250 LGGIGGTSL 258
26|Sequence|126|135|GGYMLGSAMS
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 454 GGYLLGS 460
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 454 GGYLLGS 460
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 454 GGYLLGS 460
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 454 GGYLLGS 460
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 455 GGYLLGS 461
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 468 GGYLLGS 474
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 468 GGYLLGS 474
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 461 GGYLLGS 467
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 461 GGYLLGS 467
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 1 GGYMLGS 7
GGY+LGS
Sbjct: 467 GGYLLGS 473
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 3 YMLGSAMS 10
YMLGSA S
Sbjct: 283 YMLGSAPS 290
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMIGSAPS 290
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMIGSAPS 290
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMIGSAPS 290
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMIGSAPS 290
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMVGSAPS 290
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMVGSAPS 290
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 3 YMLGSAMS 10
YM+GSA S
Sbjct: 283 YMVGSAPS 290
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 GYMLGSAMS 10
G+MLGS S
Sbjct: 267 GWMLGSNRS 275
>sp|YVBC_VACCC|UNCHARACTERIZED 10.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GGYMLGSA 8
GGY+ G+A
Sbjct: 43 GGYLDGAA 50
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 1 GGYMLGSAM 9
G Y+LG A+
Sbjct: 123 GAYILGFAI 131
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 267 GWMLGS 272
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 265 GWMLGS 270
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 265 GWMLGS 270
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 265 GWMLGS 270
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 263 GWMLGS 268
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 269 GWMLGS 274
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 269 GWMLGS 274
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 269 GWMLGS 274
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 268 GWMLGS 273
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GYMLGS 7
G+MLGS
Sbjct: 269 GWMLGS 274
27|Sequence|131|140|GSAMSRPIIH
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SAMSRPIIH 10
+ MSRPII+
Sbjct: 506 TKMSRPIIN 514
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GSAMSRPIIH 10
GSAM R ++H
Sbjct: 19 GSAMPRRVLH 28
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GSAMSRPIIH 10
GSAM R ++H
Sbjct: 19 GSAMPRRVLH 28
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 SAMSRPIIH 10
S +S P IH
Sbjct: 1895 STISEPTIH 1903
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 6 RPIIH 10
RPIIH
Sbjct: 862 RPIIH 866
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 4 MSRPIIH 10
+ RPI+H
Sbjct: 99 LDRPIMH 105
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 RPIIH 10
RPIIH
Sbjct: 848 RPIIH 852
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 RPIIH 10
RPIIH
Sbjct: 848 RPIIH 852
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 RPIIH 10
RPIIH
Sbjct: 848 RPIIH 852
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 RPIIH 10
RPIIH
Sbjct: 848 RPIIH 852
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 6 RPIIH 10
RPIIH
Sbjct: 848 RPIIH 852
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 6 RPIIH 10
RPIIH
Sbjct: 863 RPIIH 867
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 4 MSRPIIH 10
+ RPI+H
Sbjct: 99 LDRPIMH 105
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 6 RPIIH 10
RPIIH
Sbjct: 846 RPIIH 850
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 6 RPIIH 10
RPIIH
Sbjct: 863 RPIIH 867
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 GSAMSRPII 9
GSA+ P+I
Sbjct: 448 GSAVHSPVI 456
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 GSAMSRPII 9
GSA+ P+I
Sbjct: 448 GSAVHSPVI 456
>sp|CAP6_ADE40|PRE-PROTEIN VI|Human adenovirus F serotype 40
Query: 1 GSAMSRP 7
G+A+SRP
Sbjct: 221 GTAVSRP 227
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GSAMSRPII 9
GSA+ P+I
Sbjct: 448 GSAVHSPVI 456
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 GSAMSRPII 9
GSA+ P+I
Sbjct: 448 GSAVHSPVI 456
28|Sequence|136|145|RPIIHFGSDY
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 PIIHFGSD 9
P++H GSD
Sbjct: 100 PLVHDGSD 107
>sp|VP2_SVSAP|MINOR capsid protein VP2|Sapporo virus (isolate
Query: 1 RPIIHFGS 8
RPI+H G+
Sbjct: 101 RPIMHAGT 108
>sp|VP2_SVM93|MINOR capsid protein VP2|Sapporo virus (strain Human/United
Query: 1 RPIIHFGS 8
RPI+H G+
Sbjct: 101 RPIMHAGT 108
>sp|VE1_HPV29|REPLICATION protein E1|Human papillomavirus 29
Query: 1 RPIIHF 6
+PI+HF
Sbjct: 451 KPIVHF 456
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 2 PIIHF 6
PI+HF
Sbjct: 288 PIVHF 292
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 3 IIHFGSDY 10
I HFG Y
Sbjct: 536 ITHFGKGY 543
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 1 RPIIHFGSDY 10
+P+ HF S +
Sbjct: 340 KPLCHFSSRF 349
>sp|VE8E2_HPV54|PROTEIN E8^E2C|Human papillomavirus type 54
Query: 2 PIIHF 6
PI+HF
Sbjct: 96 PIVHF 100
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 IIHFGS 8
+IHFG+
Sbjct: 6865 VIHFGA 6870
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 IIHFGS 8
+IHFG+
Sbjct: 6842 VIHFGA 6847
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 IIHFGS 8
+IHFG+
Sbjct: 6842 VIHFGA 6847
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 HFGSDY 10
HF +DY
Sbjct: 1517 HFDADY 1522
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 HFGSDY 10
HF +DY
Sbjct: 1518 HFDADY 1523
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 1 RPIIHFGS 8
RP+ FGS
Sbjct: 521 RPLTTFGS 528
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 3 IIHFGSD 9
++H G+D
Sbjct: 683 VVHLGTD 689
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 IIHFGSD 9
++H G+D
Sbjct: 683 VVHLGTD 689
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 5 HFGSDY 10
HF SDY
Sbjct: 200 HFLSDY 205
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 2 PIIHF 6
P++HF
Sbjct: 429 PVVHF 433
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 2 PIIHF 6
P++HF
Sbjct: 429 PVVHF 433
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 3 IIHFGSD 9
++H+G+D
Sbjct: 169 LVHWGAD 175
29|Sequence|141|150|FGSDYEDRYY
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 296 DYVDRFY 302
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 297 DYVDRFY 303
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 297 DYVDRFY 303
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 292 DYVDRFY 298
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 294 DYVDRFY 300
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 298 DYVDRFY 304
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 294 DYVDRFY 300
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 297 DYVDRFY 303
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 296 DYVDRFY 302
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 297 DYVDRFY 303
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 297 DYVDRFY 303
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 292 DYVDRFY 298
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 294 DYVDRFY 300
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 298 DYVDRFY 304
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 295 DYVDRFY 301
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 294 DYVDRFY 300
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR+Y
Sbjct: 297 DYVDRFY 303
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 4 DYEDRYY 10
+YED YY
Sbjct: 18 EYEDLYY 24
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 FGSDYEDR 8
FG+ YED+
Sbjct: 390 FGAAYEDQ 397
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 FGSDYEDR 8
FG+ YED+
Sbjct: 390 FGAAYEDQ 397
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 GSDYEDR 8
G DY DR
Sbjct: 211 GQDYRDR 217
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 1 FGSDYED 7
FG+ YED
Sbjct: 390 FGAAYED 396
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 1 FGSDYED 7
FG+ YED
Sbjct: 390 FGAAYED 396
>sp|NCAP_INBLE|NUCLEOPROTEIN B virus (strain B/Lee/1940)
Query: 1 FGSDYED 7
FG+ YED
Sbjct: 390 FGAAYED 396
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 FGSDYED 7
FG+ YED
Sbjct: 390 FGAAYED 396
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 FGSDYEDRY 9
F Y+DRY
Sbjct: 501 FQRTYDDRY 509
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 297 DYVDRFF 303
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 301 DYVDRFF 307
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 293 DYVDRFF 299
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 294 DYVDRFF 300
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 293 DYVDRFF 299
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 297 DYVDRFF 303
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 301 DYVDRFF 307
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 293 DYVDRFF 299
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 294 DYVDRFF 300
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 291 DYVDRFF 297
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 293 DYVDRFF 299
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 DYEDRYY 10
DY DR++
Sbjct: 295 DYVDRFF 301
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 GSDYEDR 8
GSD +DR
Sbjct: 311 GSDLDDR 317
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 GSDYEDR 8
GSD +DR
Sbjct: 311 GSDLDDR 317
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GSDYEDRYY 10
G+D E ++Y
Sbjct: 3414 GTDLEGKFY 3422
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 DYEDRYY 10
+YE R+Y
Sbjct: 2261 NYEHRFY 2267
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 5 YEDRYY 10
Y+D YY
Sbjct: 592 YQDNYY 597
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GSDYEDRYY 10
G+D E ++Y
Sbjct: 3414 GTDLEGKFY 3422
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 YEDRYY 10
Y+D YY
Sbjct: 592 YQDNYY 597
>sp|TYSY_VZVO|THYMIDYLATE synthase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FGSDYED 7
FG++Y+D
Sbjct: 130 FGAEYKD 136
>sp|TYSY_VZVD|THYMIDYLATE synthase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FGSDYED 7
FG++Y+D
Sbjct: 130 FGAEYKD 136
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FGSDYEDRYY 10
FG+ +ED YY
Sbjct: 16 FGNCHEDPYY 25
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 2 GSDYEDRYY 10
G D E YY
Sbjct: 190 GKDVESGYY 198
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FGSDYEDRY 9
+ SDY D Y
Sbjct: 350 YMSDYNDTY 358
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 1 FGSDYEDRY 9
+ SDY D Y
Sbjct: 350 YMSDYNDTY 358
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 4 DYEDRYY 10
DY DR Y
Sbjct: 26 DYLDRLY 32
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 DYEDRYY 10
DY DR Y
Sbjct: 26 DYLDRLY 32
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 GSDYEDR 8
GSD ED+
Sbjct: 1011 GSDLEDQ 1017
30|Sequence|146|155|EDRYYRENMH
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 2 DRYYRE 7
DRYYRE
Sbjct: 213 DRYYRE 218
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 2 DRYYRE 7
DRYYRE
Sbjct: 213 DRYYRE 218
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 5 YRENMH 10
YR+NMH
Sbjct: 1063 YRKNMH 1068
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 DRYYREN 8
DRYYRE
Sbjct: 211 DRYYRET 217
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 DRYYREN 8
DRYYRE
Sbjct: 211 DRYYRET 217
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DRYYRE 7
DRYY E
Sbjct: 112 DRYYME 117
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 YYREN 8
YYR+N
Sbjct: 1378 YYRDN 1382
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 YYREN 8
YYR+N
Sbjct: 1377 YYRDN 1381
>sp|RP22_VAR67|DNA-DIRECTED RNA polymerase 22 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 RYYRENM 9
R++R NM
Sbjct: 163 RFFRNNM 169
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 DRYYRE 7
D+YY E
Sbjct: 926 DKYYEE 931
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 4 YYRENM 9
Y++ENM
Sbjct: 106 YFKENM 111
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 YYREN 8
YYR+N
Sbjct: 1375 YYRDN 1379
>sp|RP22_VACCC|DNA-DIRECTED RNA polymerase 22 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RYYRENM 9
R++R NM
Sbjct: 163 RFFRNNM 169
>sp|RP22_MONPV|DNA-DIRECTED RNA polymerase 22 kDa|Monkeypox virus (MPXV)
Query: 3 RYYRENM 9
R++R NM
Sbjct: 163 RFFRNNM 169
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 DRYYRENMH 10
++YY MH
Sbjct: 285 NKYYNLTMH 293
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 4 YYRENMH 10
+YR+N H
Sbjct: 255 HYRKNYH 261
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 1 EDRYYREN 8
+D YY+E+
Sbjct: 352 DDSYYQED 359
31|Sequence|151|160|RENMHRYPNQ
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 6 RYPNQ 10
RYPNQ
Sbjct: 495 RYPNQ 499
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 1 RENMHRY 7
R+N+H+Y
Sbjct: 405 RKNIHKY 411
>sp|IR02_HCMVA|UNCHARACTERIZED protein IRL2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 MHRYP 8
+HRYP
Sbjct: 23 LHRYP 27
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 ENMHRYPNQ 10
EN+ +Y NQ
Sbjct: 368 ENVRKYMNQ 376
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 ENMHRYPNQ 10
EN+ +Y NQ
Sbjct: 368 ENVRKYMNQ 376
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 ENMHRYPNQ 10
EN+ +Y NQ
Sbjct: 368 ENVRKYMNQ 376
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 6 RYPNQ 10
RYPN+
Sbjct: 480 RYPNE 484
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 NMHRYPN 9
++HR PN
Sbjct: 1246 SLHRAPN 1252
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 HRYP 8
HRYP
Sbjct: 695 HRYP 698
>sp|HN_PI1HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 1 virus (strain
Query: 5 HRYPNQ 10
HRY N+
Sbjct: 304 HRYKNE 309
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 HRYP 8
HRYP
Sbjct: 695 HRYP 698
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 HRYP 8
HRYP
Sbjct: 695 HRYP 698
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 HRYP 8
HRYP
Sbjct: 695 HRYP 698
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 NMHRYPN 9
N+H YP+
Sbjct: 117 NVHHYPS 123
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 ENMHRYPN 9
E +HR+P+
Sbjct: 609 ELVHRFPS 616
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NMHRYPN 9
N+H YP+
Sbjct: 127 NVHHYPS 133
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NMHRYPN 9
N+H YP+
Sbjct: 127 NVHHYPS 133
32|Sequence|156|165|RYPNQVYYRP
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 RYPNQVYYRP 10
R PN + Y+P
Sbjct: 949 RAPNLISYKP 958
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 RYPNQVYYRP 10
R PN + Y+P
Sbjct: 949 RAPNLISYKP 958
>sp|VC14_VACCC|PROTEIN C14|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RYPNQVYYR 9
++P+ YYR
Sbjct: 31 KFPDMAYYR 39
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 1 RYPNQVYYR 9
R+P+ YYR
Sbjct: 141 RFPDMAYYR 149
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 YPNQVYYR 9
+PNQV+ R
Sbjct: 532 FPNQVWDR 539
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 3 PNQVYY 8
PN+VYY
Sbjct: 299 PNKVYY 304
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 6 VYYRP 10
VYY+P
Sbjct: 2661 VYYKP 2665
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 QVYYR 9
QVYYR
Sbjct: 1393 QVYYR 1397
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 QVYYR 9
QVYYR
Sbjct: 1394 QVYYR 1398
>sp|A57_VACCC|GUANYLATE kinase homolog|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PNQVYYRP 10
P VY RP
Sbjct: 72 PYSVYIRP 79
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 RYPNQVY 7
RY N+VY
Sbjct: 2474 RYHNKVY 2480
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PNQVYYRP 10
PNQ+ ++P
Sbjct: 100 PNQMTFQP 107
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 QVYYR 9
QVYYR
Sbjct: 1395 QVYYR 1399
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 QVYYR 9
QVYYR
Sbjct: 1393 QVYYR 1397
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RYPNQVY 7
RY N+VY
Sbjct: 2474 RYHNKVY 2480
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 RYPNQVY 7
RY N+VY
Sbjct: 2478 RYHNKVY 2484
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PNQVYYRP 10
P Q+ +RP
Sbjct: 52 PRQLVFRP 59
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PNQVYYRP 10
P Q+ +RP
Sbjct: 52 PRQLVFRP 59
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 RYPNQVY 7
RY N+VY
Sbjct: 2474 RYHNKVY 2480
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 2 YPNQVYYRP 10
+P+ V Y P
Sbjct: 114 FPSNVRYEP 122
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 YPNQVYYRP 10
Y +VY++P
Sbjct: 353 YNPRVYFKP 361
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 YPNQVYYRP 10
Y +VY++P
Sbjct: 353 YNPRVYFKP 361
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 QVYYR 9
QVYYR
Sbjct: 1394 QVYYR 1398
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 PNQVYYRP 10
P Q+ +RP
Sbjct: 52 PRQLVFRP 59
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PNQVYYRP 10
P Q+ +RP
Sbjct: 52 PRQLVFRP 59
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PNQVYYRP 10
P Q+ +RP
Sbjct: 52 PRQLVFRP 59
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 PNQVYYRP 10
P Q+ +RP
Sbjct: 52 PRQLVFRP 59
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 2 YPNQVY 7
YP QVY
Sbjct: 551 YPEQVY 556
33|Sequence|161|170|VYYRPMDEYS
>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40
Query: 1 VYYRPMDEYS 10
V YR +EYS
Sbjct: 39 VIYRAKEEYS 48
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 RPMDEYS 10
RP+DE++
Sbjct: 460 RPIDEFA 466
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 VYYRPMDEY 9
++YRP+ ++
Sbjct: 590 IWYRPVSDF 598
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 VYYRPMDEY 9
++YRP+ ++
Sbjct: 590 IWYRPVSDF 598
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 VYYRPMDEY 9
++YRP+ ++
Sbjct: 590 IWYRPVSDF 598
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 VYYRPMD 7
V+YRP +
Sbjct: 2653 VFYRPTE 2659
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YYRPMDE 8
YY P DE
Sbjct: 92 YYSPKDE 98
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YYRPMDE 8
YY P DE
Sbjct: 92 YYSPKDE 98
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YYRPMDE 8
YY P DE
Sbjct: 92 YYSPKDE 98
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 3 YRPMDEYS 10
Y PMD ++
Sbjct: 120 YAPMDRFA 127
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 VYYRPMD 7
V+YRP +
Sbjct: 2660 VFYRPSE 2666
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 VYYRPMD 7
V+YRP +
Sbjct: 2657 VFYRPSE 2663
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 VYYRPMD 7
V+YRP +
Sbjct: 2660 VFYRPSE 2666
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 18 VFYRPL 23
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1141 FYKPLDK 1147
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 1 VYYRPM 6
V+YRP+
Sbjct: 26 VFYRPL 31
Query: 2 YYRPMDE 8
+Y+P+D+
Sbjct: 1149 FYKPLDK 1155
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 YYRPMDEY 9
Y RP+D Y
Sbjct: 275 YKRPVDTY 282
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 VYYRPMDE 8
V Y P+DE
Sbjct: 2878 VCYTPIDE 2885
34|Sequence|166|175|MDEYSNQNNF
>sp|ENV_DHVI1|ENVELOPE glycoprotein|Dhori virus (strain Indian/1313/61) (Dho)
Query: 1 MDEYSNQNNF 10
+ +YSN N+F
Sbjct: 143 LKKYSNNNHF 152
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 4 YSNQNNF 10
YSN+N F
Sbjct: 38 YSNRNRF 44
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 EYSNQN 8
EYSNQN
Sbjct: 169 EYSNQN 174
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 3 EYSNQNNF 10
E +NQN+F
Sbjct: 87 ESANQNSF 94
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 3 EYSNQNNF 10
E +NQN+F
Sbjct: 87 ESANQNSF 94
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 3 EYSNQNNF 10
E +NQN+F
Sbjct: 87 ESANQNSF 94
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 3 EYSNQNNF 10
E +NQN+F
Sbjct: 87 ESANQNSF 94
>sp|E310_ADE07|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 7
Query: 3 EYSNQN 8
EY NQN
Sbjct: 78 EYRNQN 83
>sp|E310_ADE03|EARLY E3B 10.4 kDa protein|Human adenovirus B serotype 3
Query: 3 EYSNQN 8
EY NQN
Sbjct: 78 EYRNQN 83
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 MDEYSN 6
+DEYSN
Sbjct: 485 VDEYSN 490
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 MDEYSNQ 7
MDEYS +
Sbjct: 1 MDEYSEE 7
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 DEYSNQNNF 10
DEY N+F
Sbjct: 1335 DEYGGHNDF 1343
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 DEYSNQNNF 10
DEY N+F
Sbjct: 1335 DEYGGHNDF 1343
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 DEYSNQNN 9
DE+SN +N
Sbjct: 25 DEFSNMSN 32
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 DEYSNQNN 9
DE+SN +N
Sbjct: 25 DEFSNMSN 32
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 4 YSNQNNF 10
Y+N+N F
Sbjct: 39 YANRNRF 45
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 DEYSNQNN 9
D +SNQ N
Sbjct: 1905 DWFSNQKN 1912
35|Sequence|171|180|NQNNFVHDCV
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 1 NQNNFVHDC 9
NQ +V DC
Sbjct: 398 NQAKYVRDC 406
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 NQNNFVHDC 9
NQ +V DC
Sbjct: 397 NQAKYVRDC 405
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 NFVHDCV 10
+ +HDCV
Sbjct: 235 HLIHDCV 241
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 NFVHDCV 10
+ +HDCV
Sbjct: 235 HLIHDCV 241
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 NFVHD 8
NFVHD
Sbjct: 76 NFVHD 80
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 NFVHD 8
NFVHD
Sbjct: 76 NFVHD 80
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 NNFVHDCV 10
+NF+HD V
Sbjct: 315 DNFLHDYV 322
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 NNFVHDCV 10
+NF+HD V
Sbjct: 315 DNFLHDYV 322
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 NNFVHDCV 10
+NF+HD V
Sbjct: 315 DNFLHDYV 322
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 1 NQNNFVHDC 9
N+N V DC
Sbjct: 129 NENELVLDC 137
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 5 FVHDCV 10
VHDC+
Sbjct: 563 LVHDCI 568
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 1 NQNNFVHDCV 10
N NN + CV
Sbjct: 405 NSNNIMFSCV 414
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 3 NNFVHDC 9
NN + DC
Sbjct: 168 NNLIQDC 174
>sp|UL34_HCMVT|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 QNNFVH 7
QN+F+H
Sbjct: 218 QNSFLH 223
>sp|UL34_HCMVM|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QNNFVH 7
QN+F+H
Sbjct: 218 QNSFLH 223
>sp|UL34_HCMVA|TRANSCRIPTIONAL regulator UL34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QNNFVH 7
QN+F+H
Sbjct: 218 QNSFLH 223
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 NQNNFVHDC 9
++N F DC
Sbjct: 602 HENGFCSDC 610
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 NFVHD 8
NF+HD
Sbjct: 333 NFLHD 337
>sp|TRM1_HHV8P|TRIPARTITE terminase subunit 1|Human herpesvirus 8 type P
Query: 2 QNNFVH 7
QN+F+H
Sbjct: 479 QNHFLH 484
>sp|VP2_NVN68|MINOR capsid protein VP2|Norovirus (strain Human/NoV/United
Query: 2 QNNFVHD 8
+N+F HD
Sbjct: 43 ENSFKHD 49
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 NQNNFVHDC 9
++N F DC
Sbjct: 602 HENGFCTDC 610
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NQNNFVH 7
N N F+H
Sbjct: 143 NTNTFIH 149
36|Sequence|176|185|VHDCVNITIK
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 CVNITIK 10
C NITIK
Sbjct: 130 CHNITIK 136
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 1 VHDCVNIT 8
VHD +N++
Sbjct: 149 VHDLINVS 156
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 VHDCVNI 7
+ DCVNI
Sbjct: 451 LEDCVNI 457
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VHDCVNI 7
+ DCVNI
Sbjct: 451 LEDCVNI 457
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VHDCVNIT 8
VHD +N++
Sbjct: 149 VHDLINLS 156
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HDCVNI 7
H+CVN+
Sbjct: 50 HNCVNV 55
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 4 CVNITIK 10
CVN+T +
Sbjct: 15 CVNLTTR 21
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 2 HDCVNI 7
H+CVN+
Sbjct: 50 HNCVNV 55
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HDCVNI 7
H+CVN+
Sbjct: 50 HNCVNV 55
37|Sequence|181|190|NITIKQHTVT
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 NITIKQHTVT 10
N +KQHT T
Sbjct: 1125 NALMKQHTET 1134
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 NITIKQHTV 9
NIT+ +H++
Sbjct: 946 NITVGEHSI 954
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 NITIKQHTV 9
NIT+ +H++
Sbjct: 946 NITVGEHSI 954
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 NITIKQHTV 9
NIT+ +H++
Sbjct: 947 NITVGEHSI 955
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 NITIKQHTV 9
NIT+ +H++
Sbjct: 947 NITVGEHSI 955
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 2 ITIKQHTV 9
+ IKQH++
Sbjct: 246 VLIKQHSI 253
>sp|E3145_ADE05|EARLY E3 14.5 kDa protein|Human adenovirus C serotype 5
Query: 2 ITIKQHTV 9
ITI QH+V
Sbjct: 88 ITITQHSV 95
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 NITIKQHT 8
NIT+ +H+
Sbjct: 946 NITVGEHS 953
38|Sequence|186|195|QHTVTTTTKG
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 HTVTTTTK 9
HT+ T+TK
Sbjct: 247 HTIDTSTK 254
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QHTVTTTT 8
QH + TTT
Sbjct: 181 QHQLATTT 188
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QHTVTTTT 8
QH + TTT
Sbjct: 181 QHQLATTT 188
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 1 QHTVTT 6
+HTVTT
Sbjct: 138 KHTVTT 143
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 QHTVTTTTK 9
+HTV TT+
Sbjct: 183 EHTVVCTTE 191
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 HTVTTTTKG 10
HT+ TTKG
Sbjct: 1552 HTLWHTTKG 1560
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 QHTVTTT 7
QH VTT+
Sbjct: 2320 QHAVTTS 2326
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 HTVTTTTKG 10
HT+ TTKG
Sbjct: 1548 HTLWHTTKG 1556
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 QHTVTTT 7
QH VTT+
Sbjct: 2324 QHAVTTS 2330
39|Sequence|191|200|TTTKGENFTE
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 2 TTKGENFT 9
TT+G NFT
Sbjct: 368 TTRGTNFT 375
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 KGENFT 9
KGEN+T
Sbjct: 1625 KGENYT 1630
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TTKGENFTE 10
+TKG N TE
Sbjct: 401 STKGSNNTE 409
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 TTKGENFTE 10
+TKG N TE
Sbjct: 396 STKGSNNTE 404
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 TTTKGE 6
TTTKGE
Sbjct: 1581 TTTKGE 1586
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 6 ENFTE 10
ENFTE
Sbjct: 489 ENFTE 493
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 TTKGENFT 9
TT+ NFT
Sbjct: 335 TTRSTNFT 342
>sp|SPI2_VARV|SERINE proteinase inhibitor 2|Variola virus
Query: 1 TTTKGEN 7
++TKGEN
Sbjct: 9 SSTKGEN 15
>sp|SPI2_VAR67|SERINE proteinase inhibitor 2|Variola virus (isolate
Query: 1 TTTKGEN 7
++TKGEN
Sbjct: 9 SSTKGEN 15
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 6 ENFTE 10
ENFTE
Sbjct: 489 ENFTE 493
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 TTTKGENFTE 10
T +G+N+TE
Sbjct: 130 TRPEGQNYTE 139
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 TTKGENFT 9
TT+ NFT
Sbjct: 334 TTRSTNFT 341
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 TTTKGENFTE 10
T +G+N+TE
Sbjct: 130 TRPEGQNYTE 139
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 TTKGENFT 9
TT+ NFT
Sbjct: 336 TTRSTNFT 343
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 TTTKGEN 7
TTT+G N
Sbjct: 320 TTTEGRN 326
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 TTKGENFT 9
TT+ NFT
Sbjct: 336 TTRSTNFT 343
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 TTTKGEN 7
TTT+G N
Sbjct: 320 TTTEGRN 326
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 TTTKGEN 7
TTT+G N
Sbjct: 320 TTTEGRN 326
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 TTKGENF 8
TTKG+N
Sbjct: 145 TTKGDNL 151
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 TTKGEN 7
T+KGEN
Sbjct: 154 TSKGEN 159
40|Sequence|196|205|ENFTETDVKM
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT DVKM
Sbjct: 1290 NFTSQDVKM 1298
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT DVKM
Sbjct: 1288 NFTSQDVKM 1296
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1290 NFTSQEVKM 1298
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1289 NFTSQEVKM 1297
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1291 NFTSQEVKM 1299
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1291 NFTSQEVKM 1299
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1289 NFTSQEVKM 1297
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1290 NFTSQEVKM 1298
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1288 NFTSQEVKM 1296
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1290 NFTSQEVKM 1298
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT +VKM
Sbjct: 1289 NFTSQEVKM 1297
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 NFTETDVK 9
++TETD+K
Sbjct: 1341 HYTETDLK 1348
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 NFTETDVK 9
++TETD+K
Sbjct: 1341 HYTETDLK 1348
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 NFTETDVK 9
++TETD+K
Sbjct: 1341 HYTETDLK 1348
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 NFTETDVKM 10
NFT VKM
Sbjct: 1289 NFTSPSVKM 1297
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 ENFTET 6
ENF+ET
Sbjct: 181 ENFSET 186
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 NFTETD 7
NFTET+
Sbjct: 720 NFTETN 725
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 NFTETD 7
NFTET+
Sbjct: 720 NFTETN 725
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 NFTETDVKM 10
NF +TD +M
Sbjct: 2139 NFDQTDFEM 2147
41|Sequence|201|210|TDVKMMERVV
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 DVKMMERVV 10
D+K MERVV
Sbjct: 647 DLKQMERVV 655
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 DVKMMERVV 10
D+K MERVV
Sbjct: 647 DLKQMERVV 655
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 DVKMMERVV 10
D+K MERVV
Sbjct: 648 DLKQMERVV 656
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 DVKMME 7
D+KMME
Sbjct: 335 DIKMME 340
42|Sequence|206|215|MERVVEQMCI
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 MERVVEQMCI 10
+ RVVE +CI
Sbjct: 49 LNRVVEDVCI 58
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 MERVVEQM 8
MERVVEQ+
Sbjct: 652 MERVVEQV 659
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 MERVVEQM 8
MERVVEQ+
Sbjct: 651 MERVVEQV 658
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 MERVVEQM 8
MERVVEQ+
Sbjct: 651 MERVVEQV 658
>sp|ALT2B_EMCVR|PROTEIN 2B*|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 1 MERVVEQMC 9
+E +EQMC
Sbjct: 79 LEAALEQMC 87
>sp|ALT2B_EMCV|PROTEIN 2B*|Encephalomyocarditis virus
Query: 1 MERVVEQMC 9
+E +EQMC
Sbjct: 79 LEAALEQMC 87
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 2 ERVVEQMC 9
+RVV+++C
Sbjct: 6 KRVVDELC 13
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 MERVVEQMCI 10
+ R VE+ CI
Sbjct: 2692 LARGVEEFCI 2701
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 MERVVEQMC 9
++RV++++C
Sbjct: 229 VQRVLQRLC 237
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 MERVVEQMC 9
++RV++++C
Sbjct: 229 VQRVLQRLC 237
43|Sequence|211|220|EQMCITQYER
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 CITQYER 10
CIT Y R
Sbjct: 218 CITSYSR 224
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 4 CITQYER 10
CIT Y +
Sbjct: 535 CITHYNK 541
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 CITQYE 9
CIT YE
Sbjct: 720 CITPYE 725
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 CITQYE 9
CIT YE
Sbjct: 720 CITPYE 725
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 CITQYE 9
CIT YE
Sbjct: 720 CITPYE 725
>sp|NEP_I96A0|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 5 ITQYER 10
ITQ+ER
Sbjct: 32 ITQFER 37
>sp|NEP_I82A8|NUCLEAR export protein|Influenza A virus (strain
Query: 5 ITQYER 10
ITQ+ER
Sbjct: 32 ITQFER 37
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 4 CITQYE 9
CIT YE
Sbjct: 721 CITPYE 726
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 4 CITQYE 9
CIT YE
Sbjct: 721 CITPYE 726
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 CITQYE 9
CIT YE
Sbjct: 721 CITPYE 726
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 4 CITQYE 9
CIT YE
Sbjct: 721 CITPYE 726
44|Sequence|216|225|TQYERESQAY
>sp|UL116_HCMVA|UNCHARACTERIZED protein UL116|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YERESQA 9
YE ESQ+
Sbjct: 176 YEEESQS 182
45|Sequence|221|230|ESQAYYQRGS
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 5 YYQRGS 10
YYQRGS
Sbjct: 414 YYQRGS 419
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 ESQAYYQR 8
E QA+YQ+
Sbjct: 2239 ELQAFYQK 2246
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 ESQAYYQR 8
E QA+YQ+
Sbjct: 2243 ELQAFYQK 2250
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 1 ESQAYYQR 8
E+Q YY++
Sbjct: 431 EAQLYYEK 438
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ESQAYYQR 8
E+Q YY++
Sbjct: 430 EAQLYYEK 437
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ESQAYYQR 8
E+Q YY R
Sbjct: 494 ETQFYYTR 501
>sp|UL06_HCMVM|UNCHARACTERIZED protein UL6|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 YYQRG 9
YYQ+G
Sbjct: 152 YYQKG 156
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ESQAYYQR 8
E+Q YY R
Sbjct: 494 ETQFYYTR 501
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ESQAYYQR 8
E+Q YY R
Sbjct: 494 ETQFYYTR 501
46|Sequence|226|235|YQRGSSMVLF
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 1 YQRGSS 6
YQRGSS
Sbjct: 415 YQRGSS 420
47|Sequence|231|240|SMVLFSSPPV
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 2 MVLFSSPPV 10
MV FS+PPV
Sbjct: 118 MVGFSNPPV 126
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 2 MVLFSSPPV 10
MV FS+PPV
Sbjct: 118 MVGFSNPPV 126
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 713 VFSSPP 718
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 704 VFSSPP 709
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 702 VFSSPP 707
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 704 VFSSPP 709
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 710 VFSSPP 715
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 701 VFSSPP 706
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 702 VFSSPP 707
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 701 VFSSPP 706
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 708 VFSSPP 713
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 712 VFSSPP 717
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 700 VFSSPP 705
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 LFSSPP 9
+FSSPP
Sbjct: 709 VFSSPP 714
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 4 LFSSPP 9
LF+SPP
Sbjct: 1959 LFNSPP 1964
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 5 FSSPPV 10
F+SPP+
Sbjct: 2195 FASPPI 2200
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 5 FSSPPV 10
F+SPP+
Sbjct: 2195 FASPPI 2200
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 VLFSSPPV 10
V+F PP+
Sbjct: 928 VMFGDPPI 935
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 5 FSSPPV 10
F+SPP+
Sbjct: 2196 FASPPI 2201
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 2 MVLFSSPP 9
MVL S PP
Sbjct: 44 MVLSSDPP 51
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 4 LFSSPP 9
LFS+PP
Sbjct: 301 LFSAPP 306
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 2 MVLFSSPP 9
MVL S PP
Sbjct: 44 MVLSSDPP 51
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 4 LFSSPP 9
LFS+PP
Sbjct: 301 LFSAPP 306
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 MVLFSSP 8
+VLFS+P
Sbjct: 3931 IVLFSNP 3937
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 MVLFSSP 8
+VLFS+P
Sbjct: 3931 IVLFSNP 3937
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 3 VLFSSP 8
VLFSSP
Sbjct: 173 VLFSSP 178
>sp|VL2_HPV52|MINOR capsid protein L2|Human papillomavirus 52
Query: 3 VLFSSP 8
VLFSSP
Sbjct: 181 VLFSSP 186
>sp|US20_HCMVM|MEMBRANE protein US20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 MVLFSSPP 9
MV+F PP
Sbjct: 194 MVIFFCPP 201
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LFSSPPV 10
+FS PPV
Sbjct: 203 IFSRPPV 209
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LFSSPPV 10
+FS PPV
Sbjct: 203 IFSRPPV 209
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 LFSSPPV 10
+FS PPV
Sbjct: 203 IFSRPPV 209
48|Sequence|236|245|SSPPVILLIS
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 1 SSPPVILL 8
S PPVILL
Sbjct: 403 SDPPVILL 410
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 1 SSPPVILL 8
+ PPVILL
Sbjct: 356 ADPPVILL 363
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 3 PPVILL 8
PPVILL
Sbjct: 384 PPVILL 389
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 3 PPVILL 8
PPVILL
Sbjct: 348 PPVILL 353
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 3 PPVILL 8
PPVILL
Sbjct: 353 PPVILL 358
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 3 PPVILL 8
PPVILL
Sbjct: 369 PPVILL 374
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 3 PPVILL 8
PPVILL
Sbjct: 299 PPVILL 304
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 1 SSPPVI 6
S+PPVI
Sbjct: 686 STPPVI 691
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 1 SSPPVI 6
S+PPVI
Sbjct: 683 STPPVI 688
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SSPPVILLI 9
S+PP++ L+
Sbjct: 1028 STPPLVRLV 1036
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 3 PPVILL 8
PPVIL+
Sbjct: 423 PPVILV 428
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 3 PPVILL 8
PPVIL+
Sbjct: 426 PPVILV 431
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 3 PPVILL 8
PPVIL+
Sbjct: 420 PPVILV 425
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 PPVILL 8
PPVIL+
Sbjct: 414 PPVILV 419
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 PPVILL 8
PPVIL+
Sbjct: 400 PPVILV 405
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 3 PPVILL 8
PP+ILL
Sbjct: 322 PPMILL 327
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 3 PPVILL 8
PPVIL+
Sbjct: 410 PPVILV 415
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 3 PPVILL 8
PPVIL+
Sbjct: 419 PPVILV 424
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 PPVILL 8
PPVIL+
Sbjct: 415 PPVILV 420
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 3 PPVILL 8
PP+ILL
Sbjct: 322 PPMILL 327
>sp|VE8E2_HPV47|PROTEIN E8^E2C|Human papillomavirus 47
Query: 3 PPVILL 8
PPVIL+
Sbjct: 232 PPVILV 237
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 SSPPVI 6
SSPPV+
Sbjct: 1214 SSPPVV 1219
49|Sequence|241|253|ILLISFLIFLIVG
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 ILLISFLIFLIV 12
+LLISFL+ +++
Sbjct: 2223 VLLISFLLMIVL 2234
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 ILLISFLIFLIV 12
+LLI+FL+ +++
Sbjct: 2222 VLLIAFLLMIVL 2233
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 ILLISFLIFLIV 12
ILL++FL+ +++
Sbjct: 2229 ILLLTFLLMVVL 2240
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 ILLISFLIFLIV 12
+++I F+IFL++
Sbjct: 1301 LIVILFIIFLMI 1312
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 ILLISFLIFLIV 12
+++I F+IFL++
Sbjct: 1301 LIVILFIIFLMI 1312
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LISFLIFL 10
L+SFL+F
Sbjct: 765 LVSFLVFF 772
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 LISFLIFL 10
L+SFL+F
Sbjct: 765 LVSFLVFF 772
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LISFLIFL 10
L+SFL+F
Sbjct: 765 LVSFLVFF 772
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LISFLIFL 10
L+SFL+F
Sbjct: 765 LVSFLVFF 772
>sp|VP7_ROTHB|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 LLISFLIFLIV 12
+L +FL+F+++
Sbjct: 33 ILYTFLLFIVI 43
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 LISFLIFLIV 12
+++FL+F+++
Sbjct: 299 VLAFLVFMVI 308
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 3 LISFLIFLIV 12
+++FL+F+++
Sbjct: 299 VLAFLVFMVI 308
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 ILLISFLIFLIV 12
+LLI FL+ +++
Sbjct: 2224 VLLIVFLLMIVL 2235
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 ILLISFLIFLIV 12
++ SF+IFL++
Sbjct: 1306 LISFSFIIFLVL 1317
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ILLISFLIFLI 11
IL FLIFLI
Sbjct: 452 ILTAGFLIFLI 462
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 ILLISFLIFLIVG 13
ILL++ ++LI G
Sbjct: 2383 ILLVAHYMYLIPG 2395
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 ILLISFLIFLIVG 13
ILL++ ++LI G
Sbjct: 2383 ILLVAHYMYLIPG 2395
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 ILLISFLIFLIVG 13
ILL++ ++LI G
Sbjct: 2379 ILLVAHYMYLIPG 2391
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LISFLIFL 10
L+SFL+F
Sbjct: 765 LLSFLVFF 772
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 ILLISFLIFLI 11
IL FLIFLI
Sbjct: 452 ILTAGFLIFLI 462
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 ILLISFLIFLI 11
IL FLIFLI
Sbjct: 451 ILTAGFLIFLI 461
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 ILLISFLIFLI 11
ILLI+FL ++
Sbjct: 962 ILLIAFLFKIV 972
>sp|VP7_ROTH6|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 LLISFLIFLIV 12
+L FL+F+++
Sbjct: 33 ILYHFLLFIVI 43
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LISFLIFLIVG 13
+I+F+IF +G
Sbjct: 1 MIAFIIFREIG 11
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 ILLISFLIFLIV 12
I LI+F+ F+IV
Sbjct: 507 IGLITFISFIIV 518
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 ISFLIFLIVG 13
+ LIF+++G
Sbjct: 112 VLMLIFMLIG 121