1|Sequence|1|10|MEPHVLGAVL
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PHVLGA 8
PHVLGA
Sbjct: 935 PHVLGA 940
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PHVLGA 8
PHVLGA
Sbjct: 935 PHVLGA 940
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 PHVLGAV 9
PHVLG V
Sbjct: 873 PHVLGPV 879
>sp|VP6_ROTJ1|INTERMEDIATE capsid protein VP6|Rotavirus X (strain
Query: 1 MEPHVLGAVL 10
+EP VL AVL
Sbjct: 113 IEPEVLKAVL 122
>sp|VP6_ROTB2|INTERMEDIATE capsid protein VP6|Rotavirus X (isolate
Query: 1 MEPHVLGAVL 10
+EP VL AVL
Sbjct: 113 IEPEVLKAVL 122
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 MEPHVLGAVL 10
MEPH A+L
Sbjct: 2646 MEPHRADAIL 2655
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PHVLG 7
PHVLG
Sbjct: 867 PHVLG 871
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PHVLG 7
PHVLG
Sbjct: 867 PHVLG 871
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PHVLG 7
PHVLG
Sbjct: 867 PHVLG 871
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 PHVLG 7
PH+LG
Sbjct: 88 PHILG 92
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 EPHVLGAV 9
EP +LG V
Sbjct: 1540 EPDILGKV 1547
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 EPHVLGAV 9
EP +LG V
Sbjct: 1540 EPDILGKV 1547
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 EPHVLG 7
EP+VLG
Sbjct: 499 EPNVLG 504
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 EPHVLG 7
EP+VLG
Sbjct: 499 EPNVLG 504
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 EPHVLG 7
EP+VLG
Sbjct: 500 EPNVLG 505
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 EPHVLG 7
EP+VLG
Sbjct: 500 EPNVLG 505
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 EPHVLG 7
EP+VLG
Sbjct: 499 EPNVLG 504
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 EPHVLG 7
EP+VLG
Sbjct: 499 EPNVLG 504
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 2 EPHVL 6
EPH+L
Sbjct: 307 EPHIL 311
2|Sequence|6|15|LGAVLYWLLL
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 1 LGAVLYWL 8
LGAV +W+
Sbjct: 547 LGAVSFWM 554
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GAVLYWLLL 10
GA+L+W L+
Sbjct: 2372 GAMLHWTLI 2380
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GAVLYWLLL 10
GA+L+W L+
Sbjct: 2372 GAMLHWTLI 2380
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GAVLYWLLL 10
GA+L+W L+
Sbjct: 2372 GAMLHWTLI 2380
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 547 LGAISFWM 554
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 1 LGAVLYWL 8
LGA+ +W+
Sbjct: 546 LGAISFWM 553
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 LGAVLYWLL 9
L AVL W+L
Sbjct: 264 LAAVLGWML 272
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 LGAVLYWLL 9
L AVL W+L
Sbjct: 264 LAAVLGWML 272
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 YWLLL 10
YWLLL
Sbjct: 647 YWLLL 651
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 LGAVLYWLLL 10
LGA+L W+ L
Sbjct: 753 LGALLLWMGL 762
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 LGAVLYWLLL 10
LGA+L W+ L
Sbjct: 752 LGALLLWMGL 761
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 LGAVLYWL 8
LGA+L W+
Sbjct: 757 LGALLLWM 764
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 LGAVLYWL 8
LGA+L W+
Sbjct: 755 LGALLLWM 762
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 LGAVLYWL 8
+GA+L WL
Sbjct: 750 MGALLLWL 757
Query: 2 GAVLYWLLL 10
G+VL W+ L
Sbjct: 104 GSVLLWIAL 112
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 LGAVLYWL 8
LGA+L W+
Sbjct: 755 LGALLLWM 762
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 LGAVLYWL 8
+GA+L WL
Sbjct: 750 MGALLLWL 757
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 LGAVLYWL 8
LGA+L W+
Sbjct: 751 LGALLLWM 758
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 MGAVLIWV 749
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 LGAVLYWL 8
+GAVL W+
Sbjct: 742 IGAVLIWV 749
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 LGAVLYWLL 9
L AVL W+L
Sbjct: 264 LAAVLGWML 272
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 LGAVLYWLL 9
L AVL W+L
Sbjct: 264 LAAVLGWML 272
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 1 LGAVLYWLL 9
LGA ++W++
Sbjct: 261 LGAAIWWVV 269
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 LGAVLYW 7
LG++LYW
Sbjct: 363 LGSLLYW 369
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 1 LGAVLYW 7
LG++LYW
Sbjct: 363 LGSLLYW 369
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 1 LGAVLYW 7
LG++LYW
Sbjct: 366 LGSLLYW 372
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LGAVLYW 7
GA+ YW
Sbjct: 490 FGALAYW 496
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 YWLLL 10
YWLLL
Sbjct: 205 YWLLL 209
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 757 MGALLLWM 764
>sp|UL88_HHV7J|PROTEIN U59|Human herpesvirus 7 (strain JI)
Query: 1 LGAVLYW 7
LGAV +W
Sbjct: 219 LGAVNFW 225
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 758 MGALLLWM 765
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LGAVLYW 7
GA+ YW
Sbjct: 505 FGALAYW 511
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LGAVLYWL 8
LGA + WL
Sbjct: 74 LGAPMQWL 81
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 LGAVLYWL 8
LGA + WL
Sbjct: 74 LGAPMQWL 81
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen)
Query: 1 LGAVLYWL 8
LGA + WL
Sbjct: 74 LGAPMQWL 81
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 LGAVLYWLL 9
L A+L W+L
Sbjct: 191 LAAILGWML 199
Query: 1 LGAVLYWL 8
+GA+L W+
Sbjct: 686 MGALLLWM 693
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 VLYWLLL 10
V+YW LL
Sbjct: 709 VVYWELL 715
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 4 VLYWLLL 10
V+YW LL
Sbjct: 709 VVYWELL 715
>sp|US9_HHV11|ENVELOPE protein US9|Human herpesvirus 1 (strain 17)
Query: 1 LGAVLYWLL 9
GA+L WLL
Sbjct: 81 FGALLMWLL 89
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LGAVLYWLLL 10
LGA+LY+ ++
Sbjct: 356 LGALLYFSMV 365
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 GAVLYWL 8
GA+ +W+
Sbjct: 548 GAISFWM 554
>sp|US9_HHV2H|ENVELOPE protein US9|Human herpesvirus 2 (strain HG52)
Query: 1 LGAVLYWLL 9
GA+L WLL
Sbjct: 80 FGALLVWLL 88
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 4 VLYWLLL 10
+ +WLLL
Sbjct: 30 IAHWLLL 36
3|Sequence|11|20|YWLLLPCALL
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 WLLLPCALL 10
WL LPC LL
Sbjct: 239 WLDLPCKLL 247
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 2 WLLLPCALL 10
WL+ PC LL
Sbjct: 239 WLIEPCKLL 247
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 YWLLLPCAL 9
+WLL CAL
Sbjct: 1502 HWLLTLCAL 1510
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 YWLLLPCAL 9
+WL+ CAL
Sbjct: 1592 HWLITLCAL 1600
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 YWLLLPCAL 9
+W ++PC +
Sbjct: 1935 FWSVIPCLM 1943
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 YWLLLPCAL 9
+W ++PC +
Sbjct: 1936 FWSVIPCLM 1944
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WLLLPCAL 9
W +LPCA
Sbjct: 672 WQILPCAF 679
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 WLLLPCALL 10
WL L C LL
Sbjct: 71 WLFLICVLL 79
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 676 WAVLPCSF 683
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 676 WAVLPCSF 683
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 WLLLPCAL 9
W +LPC
Sbjct: 676 WAILPCTF 683
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 WLLLPCAL 9
WL+LP +L
Sbjct: 2145 WLILPPSL 2152
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 WLLLPCAL 9
WL+LP +L
Sbjct: 2145 WLILPPSL 2152
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 YWLLLPCAL 9
+W++ CAL
Sbjct: 1593 HWIITLCAL 1601
>sp|VE7_HPV63|PROTEIN E7|Human papillomavirus type 63
Query: 1 YWLLLPCAL 9
Y ++LPC L
Sbjct: 39 YAIVLPCGL 47
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 673 WAILPCSF 680
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 WLLLPCA 8
W +LPC+
Sbjct: 676 WAVLPCS 682
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 673 WAILPCSF 680
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human
Query: 2 WLLLPCALL 10
W+ L C LL
Sbjct: 71 WMFLVCILL 79
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 672 WQILPCSF 679
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 672 WQILPCSF 679
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 WLLLPCAL 9
W +LPC+
Sbjct: 672 WQILPCSF 679
>sp|VIF_HV193|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YWLLLP 6
YW LLP
Sbjct: 69 YWGLLP 74
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 WLLLPCA 8
W +LPC+
Sbjct: 676 WAILPCS 682
>sp|NCAP_SEOUS|NUCLEOPROTEIN virus (strain SR-11) (Sapporo
Query: 2 WLLLPCALL 10
WL PC +
Sbjct: 239 WLGAPCKFM 247
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 WLLLPC 7
W +LPC
Sbjct: 676 WAILPC 681
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WLLLPCALL 10
WL L C L+
Sbjct: 2493 WLWLLCGLV 2501
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 WLLLPCAL 9
WL+LP ++
Sbjct: 2150 WLVLPSSI 2157
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 YWLLLPC 7
YW +L C
Sbjct: 3327 YWKILHC 3333
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 YWLLLPC 7
YW +L C
Sbjct: 3239 YWKILHC 3245
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WLLLPCALL 10
WL L C L+
Sbjct: 2493 WLWLLCGLV 2501
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1391 WLLVP 1395
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1555 WLLVP 1559
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 WLLLP 6
WLL+P
Sbjct: 1557 WLLVP 1561
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YWLLLPCALL 10
Y+LL+P LL
Sbjct: 2811 YFLLIPWWLL 2820
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LLPCAL 9
LLPCAL
Sbjct: 95 LLPCAL 100
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LLPCAL 9
LLPCAL
Sbjct: 95 LLPCAL 100
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 YWLLLPCALL 10
Y+LL+P LL
Sbjct: 2811 YFLLIPWWLL 2820
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 WLLLPC 7
W +LPC
Sbjct: 676 WAILPC 681
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 WLLLPC 7
W +LPC
Sbjct: 676 WAILPC 681
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 WLLLP 6
WLL+P
Sbjct: 499 WLLIP 503
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 2 WLLLP 6
WLL+P
Sbjct: 499 WLLIP 503
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 WLLLP 6
WLL+P
Sbjct: 501 WLLIP 505
>sp|VIF_HV1MV|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YWLLLP 6
YW L+P
Sbjct: 69 YWGLMP 74
>sp|VIF_HV1AN|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 1 YWLLLP 6
YW L+P
Sbjct: 69 YWGLMP 74
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 YWLLLP 6
YW LLP
Sbjct: 711 YWELLP 716
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 1 YWLLLP 6
YW LLP
Sbjct: 711 YWELLP 716
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YWLLLPCA 8
+WL CA
Sbjct: 13 WWLTFGCA 20
4|Sequence|16|25|PCALLAACLL
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PCALLAACLL 10
PC+L+ AC+L
Sbjct: 2361 PCSLILACVL 2370
>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PCALLAACL 9
PC LL AC
Sbjct: 103 PCTLLTACF 111
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 PCALLAACL 9
PC LLA+ L
Sbjct: 1181 PCDLLASLL 1189
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PCALLAACL 9
PC LLA+ L
Sbjct: 1181 PCDLLASLL 1189
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PCALLAACL 9
PC LLA+ L
Sbjct: 1181 PCDLLASLL 1189
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PCALLAACL 9
PC LLA+ L
Sbjct: 1181 PCDLLASLL 1189
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 PCALLAACL 9
PC LLA+ L
Sbjct: 1181 PCDLLASLL 1189
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)
Query: 1 PCALLAACL 9
PC LL AC
Sbjct: 103 PCTLLTACF 111
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)
Query: 1 PCALLAACL 9
PC LL AC
Sbjct: 103 PCTLLTACF 111
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 PCALLAACL 9
P ALL CL
Sbjct: 11 PVALLILCL 19
>sp|TRX1_HHV6Z|TRIPLEX capsid protein 1|Human herpesvirus 6B (strain Z29)
Query: 1 PCALLA 6
PC LLA
Sbjct: 61 PCELLA 66
>sp|TRX1_HHV6U|TRIPLEX capsid protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PCALLA 6
PC LLA
Sbjct: 61 PCELLA 66
>sp|TRX1_HHV6H|TRIPLEX capsid protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 1 PCALLA 6
PC LLA
Sbjct: 61 PCELLA 66
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 CALLAAC 8
C LL AC
Sbjct: 1005 CGLLWAC 1011
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 CALLAAC 8
C LL AC
Sbjct: 157 CMLLYAC 163
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 CALLAAC 8
C LL AC
Sbjct: 157 CMLLYAC 163
>sp|UL60_HCMVA|UNCHARACTERIZED protein UL60|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PCALLAACLL 10
PC + AC L
Sbjct: 50 PCGIPGACAL 59
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 CALLAAC 8
C LL AC
Sbjct: 157 CMLLYAC 163
>sp|E320_ADE03|EARLY E3 20.1 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 CALLAAC 8
C LL AC
Sbjct: 156 CMLLYAC 162
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PCALLAACL 9
PC L +C+
Sbjct: 492 PCKLNGSCV 500
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 ALLAACLL 10
ALL ACLL
Sbjct: 918 ALLRACLL 925
5|Sequence|21|30|AACLLRFSGL
>sp|MCEL_VAR67|MRNA-CAPPING enzyme catalytic subunit|Variola virus (isolate
Query: 2 ACLLRFS 8
ACLLR S
Sbjct: 118 ACLLRLS 124
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 AACLLRF 7
AAC LR+
Sbjct: 236 AACSLRY 242
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AACLLRFSG 9
A C+ +F+G
Sbjct: 48 ARCVFQFNG 56
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 ACLLRFS 8
AC+ RFS
Sbjct: 170 ACVTRFS 176
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 ACLLRFS 8
AC+ RFS
Sbjct: 170 ACVTRFS 176
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 ACLLRFS 8
AC+ RFS
Sbjct: 170 ACVTRFS 176
6|Sequence|26|35|RFSGLSLVYL
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 SGLSLVY 9
SGL+LVY
Sbjct: 1497 SGLNLVY 1503
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 FSGLSLVYL 10
F G+S+ YL
Sbjct: 757 FKGVSVTYL 765
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 2 FSGLSLVY 9
FSG LVY
Sbjct: 434 FSGSQLVY 441
>sp|ORF5_MERS1|NON-STRUCTURAL protein ORF5|Middle East respiratory syndrome-related coronavirus
Query: 1 RFSGLSLV 8
RFS +SLV
Sbjct: 182 RFSKISLV 189
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 FSGLSLVYL 10
F G+++ YL
Sbjct: 761 FKGVAITYL 769
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 SGLSLVY 9
SGL++VY
Sbjct: 1583 SGLNVVY 1589
7|Sequence|31|40|SLVYLLFLLL
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 3 VYLLFLLL 10
+YLLF++L
Sbjct: 1 MYLLFIIL 8
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VVLLFLLL 730
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VVLLFLLL 730
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VVLLFLLL 730
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VVLLFLLL 730
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VVLLFLLL 730
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 719 VVLLFLLL 726
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 719 VVLLFLLL 726
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 719 VVLLFLLL 726
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 719 VVLLFLLL 726
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VVLLFLLL 730
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 719 VVLLFLLL 726
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 719 VVLLFLLL 726
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VILLFLLL 730
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 3 VYLLFLLL 10
V LLFLLL
Sbjct: 723 VILLFLLL 730
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 VYLLFLLL 10
+ LLFLLL
Sbjct: 719 IVLLFLLL 726
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 1 SLVYLLF 7
+L+YLLF
Sbjct: 905 TLLYLLF 911
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 1 SLVYLLF 7
+L+YLLF
Sbjct: 899 TLLYLLF 905
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 1 SLVYLLF 7
+L+YLLF
Sbjct: 906 TLLYLLF 912
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 4 YLLFLLL 10
+LLFL+L
Sbjct: 459 FLLFLIL 465
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LVYLLFLLL 10
V L+FLLL
Sbjct: 724 FVILIFLLL 732
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 LVYLLFLLL 10
V L+FLLL
Sbjct: 723 FVILIFLLL 731
8|Sequence|36|45|LFLLLLPWFP
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 FLLLLPW 8
F+LL+PW
Sbjct: 542 FVLLVPW 548
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 FLLLLPW 8
F+LL+PW
Sbjct: 542 FVLLVPW 548
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 FLLLLPW 8
F+LL+PW
Sbjct: 542 FVLLVPW 548
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 FLLLLPW 8
F+LL+PW
Sbjct: 542 FVLLVPW 548
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 FLLLLPW 8
F+LL PW
Sbjct: 542 FVLLFPW 548
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 FLLLLPW 8
F+LL+PW
Sbjct: 542 FVLLVPW 548
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 FLLLLPW 8
F+LL+PW
Sbjct: 542 FVLLVPW 548
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 FLLLLPWF 9
LLLL WF
Sbjct: 576 LLLLLIWF 583
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LLLPWFP 10
LLL W P
Sbjct: 378 LLLAWLP 384
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LLLPWFP 10
LLL W P
Sbjct: 378 LLLAWLP 384
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 LLLPWFP 10
LLL W P
Sbjct: 378 LLLAWLP 384
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 LLLPW 8
LLLPW
Sbjct: 513 LLLPW 517
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 FLLLLPWF 9
LLLL WF
Sbjct: 577 LLLLLIWF 584
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 2 FLLLLPWF 9
LLLL WF
Sbjct: 577 LLLLLIWF 584
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 LFLLLLP 7
+FL+LLP
Sbjct: 3 VFLVLLP 9
>sp|UL33_HCMVM|G-PROTEIN coupled receptor homolog UL33|Human cytomegalovirus (strain Merlin)
Query: 3 LLLLPWF 9
+LLL WF
Sbjct: 150 ILLLTWF 156
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 LFLLLLP 7
LFL LLP
Sbjct: 3412 LFLSLLP 3418
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 3 LLLLPWF 9
LLLL W+
Sbjct: 586 LLLLIWY 592
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 3 LLLLPWF 9
LLLL W+
Sbjct: 586 LLLLIWY 592
9|Sequence|41|50|LPWFPGPTRC
>sp|POLG_DEN22|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LPWFPG 6
LPW PG
Sbjct: 218 LPWLPG 223
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 3 WFPGPTR 9
W PGP R
Sbjct: 25 WLPGPNR 31
>sp|POLG_DEN2H|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 267 LPWLPG 272
>sp|POLG_DEN23|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LPWFPG 6
LPW PG
Sbjct: 218 LPWLPG 223
>sp|POLG_DEN2U|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 398 LPWLPG 403
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 218 LPWLPG 223
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PWFPGP 7
PW P P
Sbjct: 800 PWLPSP 805
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PWFPGP 7
PW P P
Sbjct: 800 PWLPSP 805
>sp|POLG_DEN2D|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LPWFPG 6
LPW PG
Sbjct: 498 LPWLPG 503
>sp|US07_HCMVM|MEMBRANE glycoprotein US7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPWFPGPT 8
LPW P P+
Sbjct: 147 LPWVPRPS 154
>sp|US07_HCMVA|UNIQUE short US7 glycoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPWFPGPT 8
LPW P P+
Sbjct: 147 LPWVPRPS 154
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 4 FPGPTR 9
FPGP R
Sbjct: 238 FPGPLR 243
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 4 FPGPTR 9
FPGP R
Sbjct: 238 FPGPLR 243
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 4 FPGPTR 9
FPGP R
Sbjct: 238 FPGPLR 243
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 3 WFPGPTR 9
W P PTR
Sbjct: 201 WVPDPTR 207
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 3 WFPG 6
WFPG
Sbjct: 732 WFPG 735
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 3 WFPG 6
WFPG
Sbjct: 731 WFPG 734
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 3 WFPG 6
WFPG
Sbjct: 731 WFPG 734
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 3 WFPGP 7
W PGP
Sbjct: 770 WLPGP 774
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 2 PWFPGPT 8
PW P PT
Sbjct: 18 PWTPRPT 24
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 2 PWFPGPT 8
PW P PT
Sbjct: 18 PWTPRPT 24
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 PWFPGPT 8
PW P PT
Sbjct: 18 PWAPRPT 24
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 LPWFPGPTR 9
LP F PT+
Sbjct: 576 LPGFSSPTK 584
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 4 FPGPTRC 10
F GP RC
Sbjct: 6 FVGPFRC 12
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 LPWFPGPTR 9
+ WF GP +
Sbjct: 1150 MSWFGGPLK 1158
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 LPWFPGPTR 9
+ WF GP +
Sbjct: 1150 MSWFGGPLK 1158
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 3 WFPGPTR 9
W P P+R
Sbjct: 209 WIPDPSR 215
>sp|IR11_HCMVA|VIRAL Fc-gamma receptor-like protein IR11|Human cytomegalovirus (strain
Query: 3 WFPGPTR 9
++PGP R
Sbjct: 151 FYPGPGR 157
>sp|RL11_HCMVM|MEMBRANE glycoprotein RL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WFPGPTR 9
++PGP R
Sbjct: 151 FYPGPGR 157
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPWFPGPTR 9
L WF PTR
Sbjct: 378 LDWFLRPTR 386
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPWFPGPTR 9
L WF PTR
Sbjct: 378 LDWFLRPTR 386
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PWFP 5
PWFP
Sbjct: 25 PWFP 28
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 WFPGPTR 9
W P P+R
Sbjct: 209 WVPDPSR 215
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PWFP 5
PWFP
Sbjct: 25 PWFP 28
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 1 LPWFPGP 7
LP+ PGP
Sbjct: 93 LPFGPGP 99
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PWFP 5
PWFP
Sbjct: 25 PWFP 28
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1614 WGPGPERA 1621
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1614 WGPGPERA 1621
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 5 PGPTR 9
PGPTR
Sbjct: 141 PGPTR 145
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1629 WGPGPERA 1636
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYSAPTR 124
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1629 WGPGPERA 1636
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYSAPTR 124
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 1 LPWFPGPTR 9
LP PGP+R
Sbjct: 107 LPPSPGPSR 115
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1614 WGPGPERA 1621
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1614 WGPGPERA 1621
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1614 WGPGPERA 1621
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 1 LPWFPGP 7
LP+ PGP
Sbjct: 93 LPFGPGP 99
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 3 WFPGPTRC 10
W PGP R
Sbjct: 1628 WGPGPERA 1635
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PWFPGPTRC 10
P+F G RC
Sbjct: 71 PFFLGIVRC 79
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 826 WIPRPMR 832
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 826 WIPRPMR 832
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 3 WFPGPTRC 10
WF RC
Sbjct: 211 WFEQKVRC 218
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 820 WIPRPPR 826
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 WFPGPTR 9
W+P P R
Sbjct: 741 WWPWPIR 747
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 4 FPGPT 8
+PGPT
Sbjct: 473 YPGPT 477
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 826 WIPRPLR 832
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PWFPGPTRC 10
PW P P R
Sbjct: 583 PWTPNPPRS 591
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 815 WIPRPPR 821
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PWFPGPTRC 10
PW P P R
Sbjct: 583 PWTPNPPRS 591
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 826 WIPRPMR 832
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 826 WIPRPLR 832
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PWFPGPTRC 10
PW P P R
Sbjct: 564 PWTPNPPRS 572
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 WFPGPTR 9
W P P R
Sbjct: 815 WIPRPPR 821
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 PWFPGPT 8
PW PT
Sbjct: 973 PWIKQPT 979
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 WFPGPTR 9
W+ PTR
Sbjct: 118 WYTAPTR 124
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 3 WFPGPTRC 10
WF GP+ C
Sbjct: 373 WFWGPSLC 380
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 2 PWFPGPT 8
PW P PT
Sbjct: 18 PWTPRPT 24
>sp|CAP6_ADE05|PRE-PROTEIN VI|Human adenovirus C serotype 5
Query: 2 PWFPGPT 8
P PGPT
Sbjct: 193 PVLPGPT 199
10|Sequence|46|55|GPTRCGLQGH
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G RCG +GH
Sbjct: 414 GCWRCGREGH 423
Query: 5 CGLQGH 10
CG +GH
Sbjct: 397 CGKEGH 402
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G RCG +GH
Sbjct: 413 GCWRCGKEGH 422
Query: 5 CGLQGH 10
CG +GH
Sbjct: 396 CGKEGH 401
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPTRCGLQGH 10
G +CG QGH
Sbjct: 409 GCWKCGQQGH 418
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPTRCGLQGH 10
G +CG QGH
Sbjct: 410 GCWKCGKQGH 419
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GPTRCG 6
GPT CG
Sbjct: 353 GPTTCG 358
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GPTRCG 6
GPT CG
Sbjct: 353 GPTTCG 358
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 CGLQGH 10
CG QGH
Sbjct: 394 CGKQGH 399
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGKEGH 420
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 CGLQGH 10
CG QGH
Sbjct: 394 CGKQGH 399
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGKEGH 420
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G RCG +GH
Sbjct: 414 GCWRCGREGH 423
>sp|GAG_HV1EL|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G RCG +GH
Sbjct: 413 GCWRCGKEGH 422
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 PTRCGLQ 8
PTRC L+
Sbjct: 900 PTRCRLE 906
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 PTRCGLQ 8
PTRC L+
Sbjct: 900 PTRCRLE 906
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 PTRCGLQ 8
PTRC L+
Sbjct: 900 PTRCRLE 906
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 413 GCWKCGREGH 422
Query: 5 CGLQGH 10
CG +GH
Sbjct: 396 CGKEGH 401
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 GPTRCG 6
GPT CG
Sbjct: 326 GPTSCG 331
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG QGH
Sbjct: 393 CGKQGH 398
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 410 GCWKCGKTGH 419
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 406 GCWKCGREGH 415
Query: 5 CGLQGH 10
CG +GH
Sbjct: 389 CGKEGH 394
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 CGLQG 9
CGLQG
Sbjct: 1205 CGLQG 1209
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 415 GCWKCGQEGH 424
Query: 1 GPTR------CGLQGH 10
GP R CG +GH
Sbjct: 388 GPRRTVKCSNCGKEGH 403
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGREGH 420
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 410 GCWKCGREGH 419
Query: 5 CGLQGH 10
CG +GH
Sbjct: 393 CGKEGH 398
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGQEGH 420
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 418 GCWKCGKEGH 427
Query: 5 CGLQGH 10
CG +GH
Sbjct: 401 CGKEGH 406
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 409 GCWKCGKEGH 418
Query: 1 GPTR------CGLQGH 10
GP R CG +GH
Sbjct: 382 GPKRTIKCFNCGKEGH 397
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 415 GCWKCGQEGH 424
Query: 5 CGLQGH 10
CG +GH
Sbjct: 398 CGKEGH 403
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 413 GCWKCGKEGH 422
Query: 1 GPTR------CGLQGH 10
GP R CG +GH
Sbjct: 386 GPRRTIKCFNCGKEGH 401
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 406 GCWKCGKEGH 415
Query: 1 GPTR-----CGLQGH 10
GP R CG +GH
Sbjct: 380 GPRRIKCFNCGKEGH 394
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 407 GCWKCGKEGH 416
Query: 5 CGLQGH 10
CG +GH
Sbjct: 390 CGKEGH 395
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 416 GCWKCGQEGH 425
Query: 5 CGLQGH 10
CG +GH
Sbjct: 399 CGKEGH 404
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 414 GCWKCGKEGH 423
Query: 5 CGLQGH 10
CG +GH
Sbjct: 397 CGKEGH 402
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 416 GCWKCGQEGH 425
Query: 1 GPTRC---GLQGH 10
GP +C G +GH
Sbjct: 392 GPIKCFNCGKEGH 404
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 409 GCWKCGKEGH 418
Query: 1 GPTR------CGLQGH 10
GP R CG +GH
Sbjct: 382 GPKRAIKCFNCGKEGH 397
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 407 GCWKCGKEGH 416
Query: 5 CGLQGH 10
CG +GH
Sbjct: 390 CGKEGH 395
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 407 GCWKCGKEGH 416
Query: 5 CGLQGH 10
CG +GH
Sbjct: 390 CGKEGH 395
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 407 GCWKCGREGH 416
Query: 5 CGLQGH 10
CG +GH
Sbjct: 390 CGKEGH 395
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 414 GCWKCGQEGH 423
Query: 5 CGLQGH 10
CG +GH
Sbjct: 397 CGKEGH 402
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 415 GCWKCGKEGH 424
Query: 5 CGLQGH 10
CG +GH
Sbjct: 398 CGKEGH 403
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 5 CGLQGH 10
C LQGH
Sbjct: 854 CALQGH 859
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 413 GCWKCGKEGH 422
Query: 1 GPTR------CGLQGH 10
GP R CG +GH
Sbjct: 386 GPRRIIKCFNCGKEGH 401
>sp|YVDB_VACCC|UNCHARACTERIZED 8.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GPTRCG 6
GP+ CG
Sbjct: 23 GPSNCG 28
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 RCGLQGH 10
+CG QGH
Sbjct: 413 KCGKQGH 419
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 RCGLQGH 10
+CG QGH
Sbjct: 412 KCGQQGH 418
>sp|Y215_ADE02|UNCHARACTERIZED protein F-215|Human adenovirus C serotype 2
Query: 4 RCGLQGH 10
RC +QGH
Sbjct: 153 RCIIQGH 159
>sp|GAG_HV1S9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 CGLQGH 10
CG QGH
Sbjct: 394 CGKQGH 399
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGKEGH 420
>sp|GAG_HV1S2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 5 CGLQGH 10
CG QGH
Sbjct: 394 CGKQGH 399
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGKEGH 420
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 1 GPTRCG 6
GPT CG
Sbjct: 171 GPTGCG 176
>sp|GAG_HV190|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 413 GCWKCGREGH 422
Query: 5 CGLQGH 10
CG +GH
Sbjct: 396 CGKEGH 401
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
>sp|GAG_HV1RH|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 416 GCWKCGQEGH 425
Query: 1 GPTRC---GLQGH 10
GP +C G +GH
Sbjct: 392 GPIKCFNCGKEGH 404
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGREGH 421
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 409 GCWKCGKEGH 418
Query: 1 GPTR------CGLQGH 10
GP R CG +GH
Sbjct: 382 GPKRAIKCFNCGKEGH 397
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 PTRCGLQGH 10
P R G Q H
Sbjct: 31 PARAGAQPH 39
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 416 GCWKCGQEGH 425
>sp|GAG_HV1J3|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1B9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1Y2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 406 GCWKCGREGH 415
>sp|GAG_HV1ND|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 410 GCWKCGREGH 419
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGQEGH 420
>sp|GAG_HV1MA|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 418 GCWKCGKEGH 427
>sp|GAG_HV196|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 407 GCWKCGKEGH 416
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1V9|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 415 GCWKCGQEGH 424
Query: 3 TRCGLQGH 10
+ CG +GH
Sbjct: 396 SNCGKEGH 403
>sp|GAG_HV1SE|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 413 GCWKCGKEGH 422
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 407 GCWKCGKEGH 416
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 415 GCWKCGKEGH 424
>sp|GAG_HV19N|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 413 GCWKCGKEGH 422
>sp|GAG_HV1OY|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 411 GCWKCGREGH 420
>sp|GAG_HV1Z2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 414 GCWKCGKEGH 423
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1N5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 GPTRCGLQGH 10
G +CG +GH
Sbjct: 412 GCWKCGKEGH 421
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 410 GCWKCGKSGH 419
Query: 5 CGLQGH 10
CG +GH
Sbjct: 393 CGKEGH 398
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 409 GCWKCGKSGH 418
Query: 5 CGLQGH 10
CG +GH
Sbjct: 392 CGKEGH 397
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 411 GCWKCGKSGH 420
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 3 TRCGLQGH 10
T C +QGH
Sbjct: 145 TWCKVQGH 152
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 GPTRCGLQG 9
GP CG+ G
Sbjct: 622 GPFDCGIYG 630
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 411 GCWKCGKSGH 420
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG QGH
Sbjct: 393 CGKQGH 398
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 411 GCWKCGKAGH 420
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 411 GCWKCGKPGH 420
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TRCGLQG 9
TRC QG
Sbjct: 351 TRCPTQG 357
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TRCGLQG 9
TRC QG
Sbjct: 351 TRCPTQG 357
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TRCGLQG 9
TRC QG
Sbjct: 351 TRCPTQG 357
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TRCGLQG 9
TRC QG
Sbjct: 351 TRCPTQG 357
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 4 RCGLQGH 10
RC ++GH
Sbjct: 83 RCFIRGH 89
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG +GH
Sbjct: 395 CGKEGH 400
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 412 GCWKCGKTGH 421
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 TRCGLQG 9
TRC QG
Sbjct: 351 TRCPTQG 357
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
Query: 1 GPTRCGLQGH 10
G +CG GH
Sbjct: 411 GCWKCGKPGH 420
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 417 KCGQEGH 423
>sp|GAG_HV193|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 410 KCGREGH 416
>sp|GAG_HV192|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 412 KCGKEGH 418
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 4 RCGLQ 8
RCG+Q
Sbjct: 695 RCGIQ 699
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 418 KCGQEGH 424
>sp|GAG_HV1C4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 415 KCGREGH 421
>sp|GAG_HV1U4|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 409 KCGKEGH 415
>sp|GAG_HV197|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 RCGLQGH 10
+CG +GH
Sbjct: 410 KCGKEGH 416
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 CGLQGH 10
CG +GH
Sbjct: 394 CGKEGH 399
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 353 RCGQAGH 359
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 353 RCGQAGH 359
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 353 RCGQAGH 359
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 5 CGLQGH 10
C L+GH
Sbjct: 127 CWLEGH 132
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 5 CGLQGH 10
C L+GH
Sbjct: 127 CWLEGH 132
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 RCGLQGH 10
RCG GH
Sbjct: 359 RCGKAGH 365
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 GPTRCGLQGH 10
GP G GH
Sbjct: 112 GPLGIGTSGH 121
11|Sequence|51|60|GLQGHTGRLL
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 GLQGHTGRL 9
G QG +GRL
Sbjct: 235 GKQGRSGRL 243
>sp|VP6_CTFVL|UNCHARACTERIZED protein VP6|Colorado tick fever virus (strain
Query: 2 LQGHTGRL 9
LQG TG L
Sbjct: 477 LQGETGHL 484
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 351 HSGRLL 356
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 5 HTGRLL 10
H+GRLL
Sbjct: 372 HSGRLL 377
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 5 HTGRL 9
HTGRL
Sbjct: 412 HTGRL 416
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 5 HTGRL 9
HTGRL
Sbjct: 400 HTGRL 404
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 5 HTGRL 9
HTGRL
Sbjct: 285 HTGRL 289
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 5 HTGRL 9
HTGRL
Sbjct: 401 HTGRL 405
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 4 GHTGRLL 10
GH GR++
Sbjct: 688 GHVGRII 694
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 LQGHTGRL 9
L GH GR
Sbjct: 1292 LAGHEGRF 1299
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 5 HTGRL 9
HTGRL
Sbjct: 417 HTGRL 421
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 5 HTGRL 9
HTGRL
Sbjct: 417 HTGRL 421
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 5 HTGRL 9
HTGRL
Sbjct: 405 HTGRL 409
>sp|VE8E2_HPV08|PROTEIN E8^E2C|Human papillomavirus type 8
Query: 5 HTGRL 9
HTGRL
Sbjct: 210 HTGRL 214
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 226 GLQPHQGPL 234
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 219 GLQPHQGPL 227
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 226 GLQPHQGPL 234
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 226 GLQPHQGPL 234
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 219 GLQPHQGPL 227
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 LQGHTG 7
L GHTG
Sbjct: 161 LPGHTG 166
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 2 LQGHTG 7
L GHTG
Sbjct: 161 LPGHTG 166
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 GLQGHTGRL 9
G QG +GRL
Sbjct: 235 GKQGRSGRL 243
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 GLQGHTGRL 9
G QG +GRL
Sbjct: 235 GKQGRSGRL 243
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 GLQGHTGRL 9
G QG +GRL
Sbjct: 235 GKQGRSGRL 243
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 GLQGHTGRL 9
G QG +GRL
Sbjct: 235 GKQGRSGRL 243
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 226 GLQPHQGPL 234
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 4 GHTGRL 9
GH GRL
Sbjct: 363 GHHGRL 368
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 1 GLQGHTGRL 9
GLQ GRL
Sbjct: 226 GLQPRQGRL 234
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 GLQGHTGRL 9
G QG +GRL
Sbjct: 235 GKQGRSGRL 243
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 5 HTGRLL 10
HTGR++
Sbjct: 207 HTGRIV 212
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 HTGRLL 10
HTGR++
Sbjct: 207 HTGRIV 212
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 1 GLQGHTGRL 9
GLQ H G L
Sbjct: 226 GLQPHQGPL 234
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 QGHTGRL 9
+GH G+L
Sbjct: 219 EGHLGKL 225
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 GLQGHT 6
LQGHT
Sbjct: 855 ALQGHT 860
12|Sequence|56|65|TGRLLRALLG
>sp|E434_ADE09|EARLY E4 34 kDa protein|Human adenovirus D serotype 9
Query: 3 RLLRALL 9
RLLRAL+
Sbjct: 264 RLLRALM 270
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TGRLLR 6
TGRL+R
Sbjct: 888 TGRLIR 893
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TGRLLR 6
TGRL+R
Sbjct: 888 TGRLIR 893
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TGRLLR 6
TGRL+R
Sbjct: 888 TGRLIR 893
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 TGRLLR 6
TGRL+R
Sbjct: 882 TGRLIR 887
13|Sequence|61|70|RALLGLSLLF
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 ALLGLSLLF 10
A++GL L+F
Sbjct: 466 AMIGLVLIF 474
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 ALLGLSLLF 10
A++GL L+F
Sbjct: 466 AMIGLVLIF 474
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 2 ALLGLSLLF 10
A++GL L+F
Sbjct: 466 AMIGLVLIF 474
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RALLGL 6
RALLGL
Sbjct: 258 RALLGL 263
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RALLGL 6
RALLGL
Sbjct: 258 RALLGL 263
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RALLGL 6
RALLGL
Sbjct: 258 RALLGL 263
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LGLSLLF 10
LGL+LLF
Sbjct: 327 LGLNLLF 333
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LGLSLLF 10
LGL+LLF
Sbjct: 327 LGLNLLF 333
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 LGLSLLF 10
+G+SLLF
Sbjct: 1070 VGMSLLF 1076
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 RALLGLSL 8
RAL+GL L
Sbjct: 680 RALMGLIL 687
14|Sequence|66|75|LSLLFLVAHL
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 3 LLFLVAH 9
L+FL+AH
Sbjct: 49 LVFLIAH 55
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 LLFLVAHL 10
LLFLVA +
Sbjct: 45 LLFLVAQI 52
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 SLLFLVAHL 10
+L+F AHL
Sbjct: 1300 TLMFQAAHL 1308
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 SLLFLVAHL 10
+L+F AHL
Sbjct: 1300 TLMFQAAHL 1308
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 SLLFLVAHL 10
+L+F AHL
Sbjct: 1300 TLMFQAAHL 1308
15|Sequence|71|80|LVAHLALQIC
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 1 LVAHLALQIC 10
L AH+ +Q C
Sbjct: 259 LYAHIQIQTC 268
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 LVAHLALQI 9
L AH ALQ+
Sbjct: 347 LQAHFALQL 355
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 AHLALQIC 10
AH+ L++C
Sbjct: 917 AHILLRVC 924
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 AHLALQIC 10
AH+ +Q C
Sbjct: 261 AHIQIQTC 268
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 VAHLAL 7
VAHLAL
Sbjct: 1220 VAHLAL 1225
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 VAHLAL 7
VAHLAL
Sbjct: 1220 VAHLAL 1225
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 VAHLAL 7
VAHLAL
Sbjct: 1216 VAHLAL 1221
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 HLALQI 9
H+ALQI
Sbjct: 2045 HMALQI 2050
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 AHLALQIC 10
AH+ ++IC
Sbjct: 923 AHVLIRIC 930
16|Sequence|76|85|ALQICLHIVP
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 3 QICLHIVP 10
Q CLH+ P
Sbjct: 51 QECLHLHP 58
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LQICLH 7
L ICLH
Sbjct: 1346 LDICLH 1351
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 QICLHIVP 10
Q CLH+ P
Sbjct: 51 QECLHLHP 58
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 1 ALQICLHIV 9
+L +C H+V
Sbjct: 64 SLDLCYHLV 72
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 5 CLHIVP 10
C HIVP
Sbjct: 76 CNHIVP 81
>sp|NSP4_ROTHC|NON-STRUCTURAL glycoprotein 4|Rotavirus C (isolate RVC/Human/United
Query: 4 ICLHIV 9
IC HIV
Sbjct: 46 ICKHIV 51
>sp|CVC2_VZVD|CAPSID vertex component 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ICLHIVP 10
+CL ++P
Sbjct: 567 VCLGVIP 573
17|Sequence|81|90|LHIVPRLDQL
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 2 HIVPRLDQL 10
H VPR+D++
Sbjct: 75 HCVPRVDRM 83
>sp|RIR1_HHV6Z|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6B (strain
Query: 2 HIVPRLDQL 10
H VPR+D++
Sbjct: 75 HCVPRVDRM 83
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 3 IVPRLDQL 10
+VP+LD+L
Sbjct: 820 VVPKLDEL 827
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 4 VPRLDQL 10
VPR DQL
Sbjct: 574 VPRADQL 580
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 4 VPRLDQL 10
VPR DQL
Sbjct: 574 VPRADQL 580
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 3 IVPRLDQL 10
+VP+LD+L
Sbjct: 824 VVPKLDEL 831
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 IVPRLDQL 10
++P+LD+L
Sbjct: 821 VIPKLDEL 828
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 IVPRLDQL 10
++P+LD+L
Sbjct: 820 VIPKLDEL 827
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 3 IVPRLDQL 10
IVP +DQL
Sbjct: 459 IVPVVDQL 466
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 3 IVPRLDQL 10
IVP +DQL
Sbjct: 461 IVPVVDQL 468
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 3 IVPRLDQ 9
I+PRL+Q
Sbjct: 29 IIPRLEQ 35
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 2 HIVPRL 7
H+VPR+
Sbjct: 1403 HVVPRV 1408
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 PRLDQ 9
PRLDQ
Sbjct: 1924 PRLDQ 1928
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 PRLDQ 9
PRLDQ
Sbjct: 1924 PRLDQ 1928
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 PRLDQ 9
PRLDQ
Sbjct: 1916 PRLDQ 1920
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 HIVPRLDQL 10
H++PRL ++
Sbjct: 388 HVLPRLREV 396
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 HIVPRLDQL 10
H++PRL ++
Sbjct: 388 HVLPRLREV 396
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HIVPRLDQL 10
++VP +DQ+
Sbjct: 182 NLVPTIDQI 190
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 2 HIVPRLD 8
H+V RLD
Sbjct: 279 HMVKRLD 285
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 2 HIVPRLD 8
H+V RLD
Sbjct: 279 HMVKRLD 285
18|Sequence|86|95|RLDQLLGPSC
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 4 QLLGPSC 10
++LGPSC
Sbjct: 603 RILGPSC 609
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 QLLGPSC 10
++LGPSC
Sbjct: 603 RILGPSC 609
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 QLLGPSC 10
++LGPSC
Sbjct: 603 RILGPSC 609
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 LDQLLGP 8
LDQ+LGP
Sbjct: 1118 LDQILGP 1124
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 LDQLLGP 8
LDQ+LGP
Sbjct: 1118 LDQILGP 1124
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 LLGPSC 10
LLGP+C
Sbjct: 51 LLGPNC 56
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 LDQLLGP 8
LDQ+LGP
Sbjct: 1119 LDQVLGP 1125
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 RLDQLLGP 8
R+D LLGP
Sbjct: 807 RVDILLGP 814
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 483 KLKKMLGPS 491
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 482 KLKKMLGPS 490
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 472 KLKKMLGPS 480
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 483 KLKKMLGPS 491
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 RLDQLLGP 8
R+D LLGP
Sbjct: 807 RVDILLGP 814
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 RLDQLLGP 8
R+D LLGP
Sbjct: 807 RVDILLGP 814
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 481 KLKKMLGPS 489
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 481 KLKKMLGPS 489
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 476 KLKKMLGPS 484
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 473 KLKKMLGPS 481
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 481 KLKKMLGPS 489
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 473 KLKKMLGPS 481
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 RLDQLLGP 8
R+D LLGP
Sbjct: 807 RVDILLGP 814
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 RLDQLLGP 8
R+D LLGP
Sbjct: 807 RVDILLGP 814
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 476 KLKKMLGPS 484
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 RLDQLLGPS 9
+L ++LGPS
Sbjct: 474 KLKKMLGPS 482
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 RLDQLLGPSC 10
+ DQ P+C
Sbjct: 264 KFDQHFNPTC 273
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 LLGPSC 10
+LGP+C
Sbjct: 51 ILGPNC 56
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 LLGPSC 10
+LGP+C
Sbjct: 51 ILGPNC 56
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 603 KVLGPDC 609
>sp|VGP_TAFVC|ENVELOPE glycoprotein|Tai Forest ebolavirus (strain Cote
Query: 4 QLLGPSC 10
+LGP C
Sbjct: 602 HILGPDC 608
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 QLLGPSC 10
+LGP C
Sbjct: 602 HILGPDC 608
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 QLLGPSC 10
+LGP C
Sbjct: 602 HILGPDC 608
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 602 RILGPDC 608
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 QLLGPSC 10
+LGP C
Sbjct: 602 HILGPDC 608
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 4 QLLGPSC 10
+LGP C
Sbjct: 602 HILGPDC 608
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 602 RILGPDC 608
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 602 RILGPDC 608
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 603 KVLGPDC 609
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 603 KVLGPDC 609
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 603 KVLGPDC 609
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 QLLGPSC 10
++LGP C
Sbjct: 603 KVLGPDC 609
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 2 LDQLLGPSC 10
L QLL P C
Sbjct: 8 LRQLLAPLC 16
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LDQLLGPSC 10
L QLL P C
Sbjct: 8 LRQLLAPLC 16
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LDQLLGPSC 10
LDQ L SC
Sbjct: 810 LDQELAASC 818
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 RLDQLLGP 8
R+D+ +GP
Sbjct: 195 RIDKAIGP 202
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 LDQLLGPSC 10
LDQ L SC
Sbjct: 810 LDQELAASC 818
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 RLDQLLGP 8
R+D+ +GP
Sbjct: 195 RIDKAIGP 202
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 RLDQLLGP 8
R+D+ +GP
Sbjct: 195 RIDKAIGP 202
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 RLDQLLGP 8
R+D+ +GP
Sbjct: 195 RIDKAIGP 202
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 RLDQLLGP 8
R+D+ +GP
Sbjct: 195 RIDKAIGP 202
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 RLDQLLGP 8
R+D+ +GP
Sbjct: 145 RIDKAIGP 152
19|Sequence|91|100|LGPSCSRWET
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 LGPSCSRWET 10
L SCS W T
Sbjct: 1271 LAISCSHWIT 1280
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 3 PSCSRWET 10
P+CS +ET
Sbjct: 240 PNCSIYET 247
>sp|OBP_HHV6Z|REPLICATION origin-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 PSCSRW 8
P CS W
Sbjct: 358 PPCSDW 363
>sp|OBP_HHV6U|REPLICATION origin-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PSCSRW 8
P CS W
Sbjct: 358 PPCSDW 363
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 LGPSCSRWET 10
L P S W+T
Sbjct: 477 LSPKKSNWDT 486
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 3 PSCSRWET 10
P+CS +ET
Sbjct: 240 PNCSIYET 247
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LGPSCSRWE 9
+GPS WE
Sbjct: 895 IGPSFDAWE 903
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LGPSCSRWE 9
+GPS WE
Sbjct: 895 IGPSFDAWE 903
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LGPSCSRWE 9
+GPS WE
Sbjct: 895 IGPSFDAWE 903
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 GPSCSRWE 9
GP CS+ E
Sbjct: 1437 GPVCSKTE 1444
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 GPSCSRWE 9
GP CS+ E
Sbjct: 1437 GPVCSKTE 1444
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LGPSCSRWE 9
+GPS WE
Sbjct: 895 IGPSFDAWE 903
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 LGPSCSRWE 9
+GPS WE
Sbjct: 895 IGPSFDAWE 903
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 GPSCSRWE 9
GP CS+ E
Sbjct: 1438 GPVCSKTE 1445
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 GPSCSRWE 9
GP CS+ E
Sbjct: 1437 GPVCSKTE 1444
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 GPSCSRWE 9
GP CS+ E
Sbjct: 1435 GPVCSKTE 1442
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 LGPSCSR 7
LGP C R
Sbjct: 669 LGPVCRR 675
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 LGPSC 5
LGPSC
Sbjct: 605 LGPSC 609
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LGPSC 5
LGPSC
Sbjct: 605 LGPSC 609
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LGPSC 5
LGPSC
Sbjct: 605 LGPSC 609
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 1 LGPSCSR 7
LGP C R
Sbjct: 238 LGPVCYR 244
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 LGPSCSR 7
LGP C R
Sbjct: 670 LGPVCRR 676
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 2 GPSCSR 7
GP+C R
Sbjct: 834 GPACGR 839
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 LGPSCS 6
+GP CS
Sbjct: 2058 VGPECS 2063
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 2 GPSCS 6
GPSC+
Sbjct: 343 GPSCA 347
>sp|SH_MUMPE|SMALL hydrophobic protein|Mumps virus (strain Enders) (MuV)
Query: 4 SCSRW 8
SCSRW
Sbjct: 47 SCSRW 51
>sp|SH_MUMPS|SMALL hydrophobic protein|Mumps virus (strain SBL) (MuV)
Query: 4 SCSRW 8
SCSRW
Sbjct: 47 SCSRW 51
>sp|SH_MUMP1|SMALL hydrophobic protein|Mumps virus (strain SBL-1) (MuV)
Query: 4 SCSRW 8
SCSRW
Sbjct: 47 SCSRW 51
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 1 LGPSCSRW 8
L PS S W
Sbjct: 237 LSPSASTW 244
20|Sequence|96|105|SRWETLSRHI
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 55 RWAVLPRH 62
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1572 RWAVLPRH 1579
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1573 RWAVLPRH 1580
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1573 RWAVLPRH 1580
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1573 RWAVLPRH 1580
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1570 RWAVLPRH 1577
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1584 RWAVLPRH 1591
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1571 RWAVLPRH 1578
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1572 RWAVLPRH 1579
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1575 RWAVLPRH 1582
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1589 RWAVLPRH 1596
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1582 RWAVLPRH 1589
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1581 RWAVLPRH 1588
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1571 RWAVLPRH 1578
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1583 RWAVLPRH 1590
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1591 RWAVLPRH 1598
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 RWETLSRH 9
RW L RH
Sbjct: 1579 RWAVLPRH 1586
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 1 SRWETLSRH 9
+RW+ +S+H
Sbjct: 560 ARWQLVSKH 568
>sp|MCEL_VACCT|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 5 TLSRHI 10
TLSRHI
Sbjct: 214 TLSRHI 219
>sp|MCEL_VACCC|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 TLSRHI 10
TLSRHI
Sbjct: 214 TLSRHI 219
>sp|MCEL_VACCA|MRNA-CAPPING enzyme catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 5 TLSRHI 10
TLSRHI
Sbjct: 214 TLSRHI 219
>sp|MCEL_MONPV|MRNA-CAPPING enzyme catalytic subunit|Monkeypox virus (MPXV)
Query: 5 TLSRHI 10
TLSRHI
Sbjct: 214 TLSRHI 219
>sp|MCEL_CWPXG|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 5 TLSRHI 10
TLSRHI
Sbjct: 214 TLSRHI 219
>sp|MCEL_CWPXB|MRNA-CAPPING enzyme catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 5 TLSRHI 10
TLSRHI
Sbjct: 214 TLSRHI 219
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WETLSRHI 10
W+TLS H+
Sbjct: 167 WQTLSNHV 174
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WETLSRHI 10
W+TLS H+
Sbjct: 167 WQTLSNHV 174
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 WETLSRH 9
W+ L+RH
Sbjct: 200 WDALARH 206
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 WETLSRH 9
W+ L+RH
Sbjct: 200 WDALARH 206
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 SRWETLS 7
S WET+S
Sbjct: 1810 SEWETIS 1816
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 2 RWETLSRHI 10
RW + S HI
Sbjct: 87 RWCSTSNHI 95
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RWETLSRHI 10
RW + S HI
Sbjct: 87 RWCSTSNHI 95
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RWETLSRHI 10
RW + S HI
Sbjct: 87 RWCSTSNHI 95
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 2 RWETLSRHI 10
RW + S HI
Sbjct: 87 RWCSTSNHI 95
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 2 RWETLSRHI 10
RW + S HI
Sbjct: 87 RWCSTSNHI 95
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RWETLSRHI 10
RW + S HI
Sbjct: 87 RWCSTSNHI 95
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 1 SRWETLSRH 9
S W T+SR+
Sbjct: 39 STWLTISRN 47
>sp|VE6_HPV49|PROTEIN E6|Human papillomavirus type 49
Query: 1 SRWETLSRH 9
+RW+ + RH
Sbjct: 125 NRWKGVCRH 133
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SRWETL 6
S+WET+
Sbjct: 1029 SQWETI 1034
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SRWETL 6
S+WET+
Sbjct: 1029 SQWETI 1034
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 SRWETL 6
S+WET+
Sbjct: 1029 SQWETI 1034
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 WETLSRHI 10
W+ + RH+
Sbjct: 5001 WDDMLRHL 5008
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 WETLSRHI 10
W+ + RH+
Sbjct: 5021 WDDMLRHL 5028
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 WETLSRHI 10
W+ + RH+
Sbjct: 5051 WDDMLRHL 5058
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 WETLSRHI 10
WE + HI
Sbjct: 938 WEKMKEHI 945
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 RWETLSRHI 10
RW +L +H+
Sbjct: 21 RWHSLVKHL 29
21|Sequence|101|110|LSRHIGVTRL
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 RHIGVTR 9
RH+GVT+
Sbjct: 2098 RHLGVTK 2104
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 RHIGVTR 9
RH+GVT+
Sbjct: 2098 RHLGVTK 2104
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 LSRHIGV 7
L RHIG+
Sbjct: 194 LCRHIGI 200
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 LSRHIGV 7
L RHIG+
Sbjct: 194 LCRHIGI 200
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 LSRHIGV 7
L RHIG+
Sbjct: 194 LCRHIGI 200
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 LSRHIGV 7
L RHIG+
Sbjct: 194 LCRHIGI 200
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 LSRHIGV 7
L RHIG+
Sbjct: 194 LCRHIGI 200
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LSRHIG 6
+SRH+G
Sbjct: 629 MSRHVG 634
22|Sequence|106|115|GVTRLDLKDI
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GVTRLDLK 8
G+T LD+K
Sbjct: 252 GLTHLDVK 259
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GVTRLDLK 8
G+T LD+K
Sbjct: 252 GLTHLDVK 259
23|Sequence|111|120|DLKDIPNAIR
>sp|VME1_SARS2|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 1 DLKDIPNAI 9
D+KD+P I
Sbjct: 160 DIKDLPKEI 168
>sp|VME1_SARS|MEMBRANE protein|Severe acute respiratory syndrome coronavirus
Query: 1 DLKDIPNAI 9
D+KD+P I
Sbjct: 159 DIKDLPKEI 167
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 DLKDIPNAI 9
+L+DI NA+
Sbjct: 80 NLRDIENAL 88
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 LKDIPN 7
LK+IPN
Sbjct: 303 LKEIPN 308
>sp|GAG_HV1MV|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 DLKDIPNAI 9
DLK + NAI
Sbjct: 74 DLKSLWNAI 82
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 LKDIPN 7
LK+IPN
Sbjct: 303 LKEIPN 308
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DLKDIPNAI 9
DLK + NAI
Sbjct: 74 DLKSLWNAI 82
24|Sequence|116|125|PNAIRLVAPD
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 1 PNAIRLVAP 9
PN IR+V P
Sbjct: 792 PNGIRIVPP 800
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 PNAIRLVAP 9
PN ++ VAP
Sbjct: 1553 PNVLKRVAP 1561
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PNAIRLVAP 9
PN ++ VAP
Sbjct: 1553 PNVLKKVAP 1561
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 PNAIRLVAP 9
PN ++ VAP
Sbjct: 1553 PNVLKKVAP 1561
>sp|PB1F2_I96A0|PROTEIN PB1-F2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PNAIRLV 7
PN+IRL+
Sbjct: 33 PNSIRLM 39
>sp|PB1F2_I68A4|PROTEIN PB1-F2|Influenza A virus (strain A/Hong
Query: 1 PNAIRLV 7
PN+IRL+
Sbjct: 33 PNSIRLM 39
>sp|PB1F2_I01A3|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PNAIRLV 7
PN+IRL+
Sbjct: 33 PNSIRLM 39
>sp|PB1F2_I01A2|PROTEIN PB1-F2|Influenza A virus (strain A/Chicken/Hong
Query: 1 PNAIRLV 7
PN+IRL+
Sbjct: 33 PNSIRLM 39
>sp|PB1F2_I01A0|PROTEIN PB1-F2|Influenza A virus (strain A/Silky
Query: 1 PNAIRLV 7
PN+IRL+
Sbjct: 33 PNSIRLM 39
>sp|PB1F2_I00A0|PROTEIN PB1-F2|Influenza A virus (strain A/Duck/Hong
Query: 1 PNAIRLV 7
PN+IRL+
Sbjct: 33 PNSIRLM 39
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 PNAIRLVA 8
PN IR+++
Sbjct: 4665 PNMIRMIS 4672
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 AIRLVAPD 10
AIR VAPD
Sbjct: 1045 AIRKVAPD 1052
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 1 PNAIRLVAP 9
P A++ +AP
Sbjct: 752 PKALKRIAP 760
>sp|PG030_VACCC|PROTEIN OPG030|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NAIRLVAPD 10
NAI +AP+
Sbjct: 175 NAIEKIAPE 183
>sp|PG030_MONPV|PROTEIN OPG030|Monkeypox virus (MPXV)
Query: 2 NAIRLVAPD 10
NAI +AP+
Sbjct: 179 NAIEKIAPE 187
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 PNAIRLVAPD 10
PN I V P+
Sbjct: 1389 PNVIHAVGPN 1398
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PNAIRLVAP 9
PN R VAP
Sbjct: 23 PNPPRQVAP 31
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PNAIRLVAP 9
PN R VAP
Sbjct: 23 PNPPRQVAP 31
25|Sequence|121|130|LVAPDLGILV
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 APDLGIL 9
APD+G+L
Sbjct: 1930 APDVGVL 1936
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2590 IVYPDLGVRV 2599
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2584 IVYPDLGVRV 2593
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2592 IVYPDLGVRV 2601
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2590 IVYPDLGVRV 2599
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2580 IVYPDLGVRV 2589
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2580 IVYPDLGVRV 2589
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2585 IVYPDLGVRV 2594
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2587 IVYPDLGVRV 2596
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2588 IVYPDLGVRV 2597
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2583 IVYPDLGVRV 2592
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2582 IVYPDLGVRV 2591
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2602 IVYPDLGVRV 2611
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2602 IVYPDLGVRV 2611
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2602 IVYPDLGVRV 2611
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2583 IVYPDLGVRV 2592
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2602 IVYPDLGVRV 2611
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2606 IVYPDLGVRV 2615
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2602 IVFPDLGVRV 2611
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2579 IVFPDLGVRV 2588
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2580 IVFPDLGVRV 2589
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2580 IVFPDLGVRV 2589
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 LVAPDLGILV 10
+V PDLG+ V
Sbjct: 2580 IVFPDLGVRV 2589
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LVAPDLGILV 10
+V PDLG+ +
Sbjct: 2588 IVYPDLGVRI 2597
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 VAPDLGILV 10
VAP LG+ V
Sbjct: 399 VAPSLGVPV 407
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 3 APDLGIL 9
+PD+G+L
Sbjct: 449 SPDMGLL 455
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 3 APDLGIL 9
+PD+G+L
Sbjct: 449 SPDMGLL 455
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 LVAPDLGI 8
L+A DLG+
Sbjct: 633 LIAKDLGL 640
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 2 VAPDLGILV 10
VAP LG+ V
Sbjct: 399 VAPSLGVPV 407
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LVAPDLGI 8
L+A DLG+
Sbjct: 956 LIAKDLGL 963
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 VAPDLGIL 9
+ PD GIL
Sbjct: 1111 IDPDAGIL 1118
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 4 PDLGIL 9
PDLG++
Sbjct: 717 PDLGLM 722
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 321 ILAPILGII 329
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 320 ILAPILGII 328
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 320 ILAPILGII 328
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 320 ILAPILGII 328
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 320 ILAPILGII 328
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 320 ILAPILGII 328
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 320 ILAPILGII 328
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 2 VAPDLGI 8
VAP LG+
Sbjct: 207 VAPGLGV 213
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 LVAPDLGIL 9
++AP LGI+
Sbjct: 321 ILAPILGII 329
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 2 VAPDLGI 8
VAP LG+
Sbjct: 208 VAPGLGV 214
26|Sequence|126|135|LGILVVSSVC
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GILVVSSVC 10
GIL+ SS+C
Sbjct: 1425 GILIGSSIC 1433
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GILVVSSVC 10
GIL+ SS+C
Sbjct: 1425 GILIGSSIC 1433
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GILVVSSVC 10
GIL+ SS+C
Sbjct: 1425 GILIGSSIC 1433
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 GILVVSSVC 10
GIL+ SS+C
Sbjct: 1426 GILIGSSIC 1434
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1426 GVLIGSSIC 1434
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 GILVVSSVC 10
G+L+ SS+C
Sbjct: 1425 GVLIGSSIC 1433
>sp|E3GL_ADE06|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 6
Query: 1 LGILVVSSVC 10
LG+L +++VC
Sbjct: 6 LGLLALAAVC 15
>sp|E3GL_ADE02|EARLY E3 18.5 kDa glycoprotein|Human adenovirus C serotype 2
Query: 1 LGILVVSSVC 10
LG+L +++VC
Sbjct: 6 LGLLALAAVC 15
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 3 ILVVSSVC 10
ILVV S+C
Sbjct: 204 ILVVLSIC 211
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 ILVVSSVC 10
ILVV S+C
Sbjct: 204 ILVVLSIC 211
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 ILVVSSVC 10
ILVV S+C
Sbjct: 205 ILVVLSIC 212
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 3 ILVVSSVC 10
ILVV S+C
Sbjct: 199 ILVVLSIC 206
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 GILVVSSVC 10
GI+ SSVC
Sbjct: 496 GIVPASSVC 504
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVEVVC 1898
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 GILVVSSVC 10
G+L ++S C
Sbjct: 539 GVLCLASAC 547
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 2 GILVVSSVC 10
G+L+ +++C
Sbjct: 546 GLLITTALC 554
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1888 GALVVGVVC 1896
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 3 ILVVSSVC 10
IL++ +VC
Sbjct: 39 ILIIQNVC 46
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1891 GALVVGVVC 1899
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1892 GALVVGVVC 1900
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1890 GALVVGVVC 1898
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1895 GALVVGVVC 1903
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 GILVVSSVC 10
G LVV VC
Sbjct: 1895 GALVVGVVC 1903
27|Sequence|131|140|VSSVCLGICG
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 3 SVCLGIC 9
S C+GIC
Sbjct: 443 STCIGIC 449
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 VCLGICG 10
VC+ ICG
Sbjct: 545 VCMEICG 551
>sp|TEG7_VZVO|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VSSVCLGICG 10
+ +VC +CG
Sbjct: 1 MQTVCASLCG 10
>sp|TEG7_VZVD|TEGUMENT protein UL51 homolog|Varicella-zoster virus (strain Dumas)
Query: 1 VSSVCLGICG 10
+ +VC +CG
Sbjct: 1 MQTVCASLCG 10
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 SVCLGIC 9
+VCL IC
Sbjct: 5996 AVCLNIC 6002
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 CLGICG 10
C G+CG
Sbjct: 1674 CKGMCG 1679
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 CLGICG 10
C G+CG
Sbjct: 1665 CKGMCG 1670
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 CLGICG 10
C G+CG
Sbjct: 1666 CKGMCG 1671
>sp|B9_HHV6Z|PROTEIN B9|Human herpesvirus 6B (strain Z29)
Query: 2 SSVCLGI 8
SS C+GI
Sbjct: 4 SSACMGI 10
Query: 2 SSVCLGI 8
SS C+GI
Sbjct: 25 SSACMGI 31
Query: 2 SSVCLGI 8
SS C+GI
Sbjct: 46 SSACMGI 52
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 VSSVCLGI 8
+SSVCL +
Sbjct: 490 LSSVCLAL 497
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 SVCLGICG 10
+VC G CG
Sbjct: 123 TVCTGFCG 130
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 SVCLGICG 10
+VC G CG
Sbjct: 123 TVCTGFCG 130
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 SVCLGICG 10
+VC G CG
Sbjct: 123 TVCTGFCG 130
>sp|U21_HHV6Z|U21 glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 SVCLGICG 10
+VC+GI G
Sbjct: 377 AVCVGILG 384
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 SSVCLGICG 10
SSV +CG
Sbjct: 494 SSVKFAVCG 502
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 SSVCLGICG 10
SSV +CG
Sbjct: 492 SSVKFAVCG 500
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 4 VCLGI 8
VCLGI
Sbjct: 371 VCLGI 375
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 VCLGI 8
VCLGI
Sbjct: 371 VCLGI 375
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VCLGI 8
VCLGI
Sbjct: 371 VCLGI 375
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 4 VCLGI 8
VCLGI
Sbjct: 371 VCLGI 375
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 4 VCLGI 8
VCLGI
Sbjct: 371 VCLGI 375
>sp|YVAU_VACCC|UNCHARACTERIZED 8.8 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VSSVCLGIC 9
++SVC G+C
Sbjct: 29 ITSVCDGVC 37
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 SVCLGIC 9
++C+G C
Sbjct: 620 NICMGKC 626
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 SVCLGIC 9
++C+G C
Sbjct: 620 NICMGKC 626
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 SVCLGICG 10
S C +CG
Sbjct: 659 SPCASVCG 666
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 SVCLGI 8
+VCLGI
Sbjct: 5938 AVCLGI 5943
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 CLGICG 10
C+G CG
Sbjct: 261 CMGRCG 266
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 CLGICG 10
C+G CG
Sbjct: 260 CMGRCG 265
28|Sequence|136|145|LGICGRLARN
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 LGICGRLARN 10
LG+CG+ N
Sbjct: 419 LGVCGKRNAN 428
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 1 LGICGRL 7
L ICGR+
Sbjct: 668 LTICGRM 674
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 LGICGRL 7
L ICGR+
Sbjct: 668 LTICGRM 674
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 LGICGRL 7
L ICGR+
Sbjct: 668 LTICGRM 674
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 1 LGICGRL 7
L ICGR+
Sbjct: 668 LTICGRM 674
>sp|UL19_HCMVM|UNCHARACTERIZED protein UL19|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GICGRL 7
G CGRL
Sbjct: 32 GFCGRL 37
>sp|UL19_HCMVA|UNCHARACTERIZED protein UL19|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GICGRL 7
G CGRL
Sbjct: 32 GFCGRL 37
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 LGICGRLA 8
+GICG A
Sbjct: 558 IGICGHKA 565
29|Sequence|141|150|RLARNTRQSP
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related
Query: 1 RLARNTRQSP 10
RLA +TR P
Sbjct: 75 RLAGHTRHLP 84
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 1 RLARNTRQSP 10
RLA +TR P
Sbjct: 75 RLAGHTRHLP 84
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 LARNTRQSP 10
L+ NT Q+P
Sbjct: 216 LSNNTTQTP 224
>sp|IE2_HHV6Z|IMMEDIATE-EARLY protein 2|Human herpesvirus 6B (strain Z29)
Query: 2 LARNTRQSP 10
L+ NT Q P
Sbjct: 18 LSENTHQDP 26
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LARNTRQS 9
L RNT+Q+
Sbjct: 125 LTRNTKQA 132
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LARNTRQS 9
L RNT+Q+
Sbjct: 125 LTRNTKQA 132
30|Sequence|146|155|TRQSPHPREL
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 3 QSPHPREL 10
Q PHP EL
Sbjct: 103 QEPHPEEL 110
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 TRQSPHPREL 10
+ Q HPREL
Sbjct: 2235 SNQDFHPREL 2244
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 TRQSPHPREL 10
+ Q HPREL
Sbjct: 2231 SNQDFHPREL 2240
>sp|VIF_HV1LW|TRUNCATED virion infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV1Y2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV1H2|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV1BR|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV1B1|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV112|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV1NA|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|VIF_HV1B5|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 QSPHPR 8
+SPHPR
Sbjct: 45 ESPHPR 50
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 1 TRQSPHPR 8
T SPHPR
Sbjct: 97 TAPSPHPR 104
>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)
Query: 1 TRQSPHPR 8
T SPHPR
Sbjct: 97 TAPSPHPR 104
>sp|DUT_VARV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus
Query: 1 TRQSPH 6
TRQSP+
Sbjct: 23 TRQSPY 28
>sp|DUT_VAR67|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Variola virus (isolate
Query: 1 TRQSPH 6
TRQSP+
Sbjct: 23 TRQSPY 28
>sp|M1_DHVI1|MATRIX protein 1|Dhori virus (strain Indian/1313/61) (Dho)
Query: 2 RQSPHPREL 10
R PH RE+
Sbjct: 18 RIGPHVREM 26
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 PHPREL 10
P+PRE+
Sbjct: 78 PNPREI 83
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 5 PHPREL 10
P+PREL
Sbjct: 456 PNPREL 461
>sp|VPX_HV2NZ|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 6 HPREL 10
HPREL
Sbjct: 40 HPREL 44
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 2 RQSPHP 7
R SPHP
Sbjct: 974 RNSPHP 979
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 1 TRQSPHPRE 9
TR+S PRE
Sbjct: 110 TRRSASPRE 118
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 6 HPREL 10
HPREL
Sbjct: 119 HPREL 123
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 3 QSPHPREL 10
Q+P P EL
Sbjct: 515 QAPDPEEL 522
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TRQSPHPRE 9
T +SPHP E
Sbjct: 134 TVKSPHPPE 142
31|Sequence|151|160|HPRELDDDER
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 HPRELDDDE 9
HPR L DD+
Sbjct: 440 HPRHLPDDD 448
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 HPRELDDD 8
HPR ++DD
Sbjct: 92 HPRSINDD 99
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PRELDDDE 9
P +LDDD+
Sbjct: 2382 PVQLDDDD 2389
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PRELDDDER 10
P + DDD+R
Sbjct: 2259 PLKADDDDR 2267
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 HPRELDDD 8
H RELD D
Sbjct: 33 HSRELDVD 40
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HPRELDDD 8
H RELD D
Sbjct: 33 HSRELDVD 40
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 PRELDDD 8
P E DDD
Sbjct: 61 PNETDDD 67
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 PRELDDD 8
PR LD+D
Sbjct: 80 PRSLDED 86
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 PRELDDD 8
PR LD+D
Sbjct: 80 PRSLDED 86
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 PRELDDD 8
P E DDD
Sbjct: 91 PNETDDD 97
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 PRELDDD 8
P E DDD
Sbjct: 65 PNETDDD 71
32|Sequence|156|165|DDDERDVDAS
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 DDERDVD 8
DDER+VD
Sbjct: 1085 DDEREVD 1091
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DDDERDV 7
DDDER+V
Sbjct: 174 DDDEREV 180
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 DDERDVD 8
DD+R+VD
Sbjct: 1086 DDDREVD 1092
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1808 DEERDI 1813
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1808 DEERDI 1813
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1808 DEERDI 1813
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1808 DEERDI 1813
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1808 DEERDI 1813
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1810 DEERDI 1815
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1809 DEERDI 1814
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 DDERDV 7
D+ERD+
Sbjct: 1810 DEERDI 1815
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DDDERDV 7
DD ER+V
Sbjct: 174 DDPEREV 180
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DDDERDV 7
DD ER+V
Sbjct: 174 DDPEREV 180
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 DDDERDVD 8
D DE D D
Sbjct: 440 DQDEPDAD 447
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DDDERDVDAS 10
++DER+V +
Sbjct: 2262 EEDEREVSVA 2271
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DDDERDV 7
DD ER+V
Sbjct: 174 DDPEREV 180
33|Sequence|161|170|DVDASPTAGL
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 VDASPTAG 9
V++SP+AG
Sbjct: 462 VNSSPSAG 469
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 DVDASP 6
DVDASP
Sbjct: 114 DVDASP 119
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 DVDASP 6
DVDASP
Sbjct: 114 DVDASP 119
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 DVDASP 6
DVDASP
Sbjct: 114 DVDASP 119
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 DVDASP 6
DVDASP
Sbjct: 114 DVDASP 119
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 DVDASP 6
DVDASP
Sbjct: 114 DVDASP 119
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 VDASPTAG 9
V+ SP+AG
Sbjct: 462 VNTSPSAG 469
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 VDASPTAG 9
V+ SP+AG
Sbjct: 462 VNTSPSAG 469
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 DVDASPTA 8
D DA+P A
Sbjct: 280 DADAAPEA 287
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DVDASPTA 8
D DA+P A
Sbjct: 280 DADAAPEA 287
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DVDASPTA 8
D DA+P A
Sbjct: 280 DADAAPEA 287
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 3 DASPTAG 9
D+SPTA
Sbjct: 265 DSSPTAA 271
34|Sequence|166|175|PTAGLQEAAT
>sp|TEG4_HHV2H|TEGUMENT protein UL21|Human herpesvirus 2 (strain HG52)
Query: 1 PTAGLQEAA 9
P GLQEAA
Sbjct: 268 PPPGLQEAA 276
>sp|UL20_HCMVM|MEMBRANE protein UL20|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TAGLQEA 8
T GLQEA
Sbjct: 201 TCGLQEA 207
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TAGLQEA 8
T GLQEA
Sbjct: 203 TCGLQEA 209
>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French
Query: 1 PTAGLQEAAT 10
P GL+EAA+
Sbjct: 35 PLWGLEEAAS 44
>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 PTAGLQEAAT 10
P GL+EAA+
Sbjct: 35 PLWGLEEAAS 44
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AGLQEAA 9
AGL+EAA
Sbjct: 304 AGLEEAA 310
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 PTAGLQEA 8
PTA ++EA
Sbjct: 2410 PTADIEEA 2417
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 PTAGLQEA 8
PTA ++EA
Sbjct: 2410 PTADIEEA 2417
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 PTAGLQEA 8
PTA ++EA
Sbjct: 2410 PTADIEEA 2417
35|Sequence|171|180|QEAATLAPTR
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 QEAATLAP 8
+EA +LAP
Sbjct: 2506 EEACSLAP 2513
36|Sequence|176|185|LAPTRRSRLA
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 LAPTRRSR 8
L PTRR++
Sbjct: 392 LVPTRRAQ 399
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 LAPTRRSR 8
L PTRR++
Sbjct: 392 LVPTRRAQ 399
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 LAPTRRSRL 9
LAP RSRL
Sbjct: 987 LAPEARSRL 995
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 APTRRS 7
APTRR+
Sbjct: 674 APTRRA 679
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 LAPTRRSR 8
L P RRSR
Sbjct: 12 LTPLRRSR 19
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 APTRRSRL 9
APTRR++
Sbjct: 2024 APTRRAQF 2031
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 APTRRSRL 9
APTRR++
Sbjct: 2002 APTRRAQF 2009
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 APTRRSRL 9
APTRR++
Sbjct: 1997 APTRRAQF 2004
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 1 LAPTRRS 7
+APT+RS
Sbjct: 119 VAPTKRS 125
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 LAPTRRSRLA 10
+ PT +RLA
Sbjct: 549 IVPTHSTRLA 558
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 3 PTRRSR 8
PT+RSR
Sbjct: 371 PTKRSR 376
37|Sequence|181|190|RSRLAARFRV
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 2 SRLAARFR 9
SRL +R+R
Sbjct: 418 SRLTSRYR 425
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RSRLAAR 7
RSRLAA+
Sbjct: 480 RSRLAAK 486
38|Sequence|186|195|ARFRVTAHWL
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 FRVTAHW 9
F+V A+W
Sbjct: 294 FKVDANW 300
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2866 KITAEWL 2872
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2866 KITAEWL 2872
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2866 KITAEWL 2872
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2866 KITAEWL 2872
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2866 KITAEWL 2872
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2863 KITAEWL 2869
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 RVTAHWL 10
++TA WL
Sbjct: 2866 KITAEWL 2872
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 ARFRVTAHW 9
ARF T W
Sbjct: 177 ARFSKTGRW 185
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 ARFRVTAHW 9
A R+TAH+
Sbjct: 416 AESRLTAHY 424
39|Sequence|191|200|TAHWLLVAAG
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TAHWLL 6
TAHWL
Sbjct: 3563 TAHWLF 3568
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 TAHWLL 6
TAHWL
Sbjct: 3563 TAHWLF 3568
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 2 AHWLLV 7
AHWLL+
Sbjct: 31 AHWLLL 36
>sp|AP3A_SARS|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 2 AHWLLVAAG 10
+H LLVAAG
Sbjct: 92 SHLLLVAAG 100
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 AHWLL 6
AHWLL
Sbjct: 1501 AHWLL 1505
>sp|AP3A_SARS2|ORF3A protein|Severe acute respiratory syndrome coronavirus
Query: 2 AHWLLVAAG 10
+H LLVAAG
Sbjct: 92 SHLLLVAAG 100
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TAHWLLV 7
T HW+L+
Sbjct: 3556 THHWMLL 3562
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TAHWLLV 7
T HW+L+
Sbjct: 3556 THHWMLL 3562
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 1 TAHWLLVAAG 10
T HWL V G
Sbjct: 432 TVHWLSVVVG 441
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 TAHWLLVAAG 10
T+ W L AAG
Sbjct: 371 TSAWTLHAAG 380
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 TAHWLLVAAG 10
T+ W L AAG
Sbjct: 370 TSAWTLHAAG 379
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 TAHWLLVAAG 10
T+ W L AAG
Sbjct: 370 TSAWTLHAAG 379
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 4 WLLVAA 9
W+LVAA
Sbjct: 275 WMLVAA 280
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TAHWLL 6
T HWL+
Sbjct: 2386 TMHWLI 2391
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 TAHWLL 6
T HWL+
Sbjct: 2406 TMHWLI 2411
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TAHWLL 6
T HWL+
Sbjct: 2436 TMHWLI 2441
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TAHWLL 6
T HWL+
Sbjct: 2386 TMHWLI 2391
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TAHWLL 6
T HWL+
Sbjct: 2406 TMHWLI 2411
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TAHWLL 6
T HWL+
Sbjct: 2436 TMHWLI 2441
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 4 WLLVAA 9
W+L+AA
Sbjct: 286 WMLIAA 291
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 AHWLLVAA 9
AHW + A+
Sbjct: 522 AHWTVTAS 529
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 AHWLLVAA 9
AHW + A+
Sbjct: 522 AHWTVTAS 529
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 TAHWLL 6
TAHWL
Sbjct: 274 TAHWLF 279
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 TAHWLL 6
TAHWL
Sbjct: 274 TAHWLF 279
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 2 AHWL 5
AHWL
Sbjct: 234 AHWL 237
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 2 AHWL 5
AHWL
Sbjct: 233 AHWL 236
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 2 AHWL 5
AHWL
Sbjct: 233 AHWL 236
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 AHWL 5
AHWL
Sbjct: 234 AHWL 237
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 AHWL 5
AHWL
Sbjct: 233 AHWL 236
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 AHWL 5
AHWL
Sbjct: 233 AHWL 236
>sp|VE2_HPV12|REGULATORY protein E2|Human papillomavirus 12
Query: 2 AHWLLV 7
AHW L+
Sbjct: 31 AHWTLL 36
40|Sequence|196|205|LVAAGRVLAV
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 3 AAGRVL 8
AAGRVL
Sbjct: 101 AAGRVL 106
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 AAGRVL 8
AAGRVL
Sbjct: 219 AAGRVL 224
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 561 GRVLAV 566
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 560 GRVLAV 565
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 560 GRVLAV 565
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 560 GRVLAV 565
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 561 GRVLAV 566
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 560 GRVLAV 565
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 560 GRVLAV 565
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 5 GRVLAV 10
GRVLAV
Sbjct: 560 GRVLAV 565
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 LVAAGRVLAV 10
L+ GR LAV
Sbjct: 1662 LLVKGRTLAV 1671
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 LVAAGRVLAV 10
L+ GR LAV
Sbjct: 1661 LLVKGRTLAV 1670
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 1 LVAAGRVLAV 10
L+ GR LAV
Sbjct: 1661 LLVKGRTLAV 1670
41|Sequence|201|210|RVLAVTLLAL
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RVLAVTLLAL 10
RVLAVT +AL
Sbjct: 319 RVLAVTAVAL 328
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 1 RVLAVTLLAL 10
R+L+ T+LA+
Sbjct: 147 RILSATMLAI 156
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 1 RVLAVTLLAL 10
R+L+ T+LA+
Sbjct: 147 RILSATMLAI 156
42|Sequence|206|215|TLLALAGIAH
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 LLALAGIAH 10
LLALAG AH
Sbjct: 99 LLALAGQAH 107
>sp|VP40_MABVR|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 LLALAGIAH 10
LLA++GI H
Sbjct: 225 LLAISGILH 233
>sp|VP40_MABVP|MATRIX protein VP40|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 LLALAGIAH 10
LLA++GI H
Sbjct: 225 LLAISGILH 233
>sp|VP40_MABVO|MATRIX protein VP40|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 LLALAGIAH 10
LLA++GI H
Sbjct: 225 LLAISGILH 233
>sp|VP40_MABVM|MATRIX protein VP40|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 LLALAGIAH 10
LLA++GI H
Sbjct: 225 LLAISGILH 233
>sp|VP40_MABVA|MATRIX protein VP40|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 LLALAGIAH 10
LLA++GI H
Sbjct: 225 LLAISGILH 233
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 LLALAGI 8
LLA+AGI
Sbjct: 52 LLAIAGI 58
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 LLALAGI 8
LLA+AGI
Sbjct: 52 LLAIAGI 58
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 LLALAGI 8
LLA+AGI
Sbjct: 52 LLAIAGI 58
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 LLALAGI 8
LLA+AGI
Sbjct: 52 LLAIAGI 58
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 LLALAGI 8
LLA+AGI
Sbjct: 52 LLAIAGI 58
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 LLALAGI 8
LLA+AGI
Sbjct: 52 LLAIAGI 58
>sp|BDL35_EBVB9|LATE gene expression regulator BDLF3.5|Epstein-Barr virus (strain
Query: 1 TLLALAGI 8
TLL LAG+
Sbjct: 63 TLLDLAGV 70
>sp|NSP4_ROTH5|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 1 TLLALAG 7
TLL LAG
Sbjct: 78 TLLTLAG 84
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 TLLALAGI 8
TLL +AG+
Sbjct: 1890 TLLQIAGV 1897
43|Sequence|211|220|AGIAHPSALS
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 HPSAL 9
HPSAL
Sbjct: 1464 HPSAL 1468
44|Sequence|216|225|PSALSSVYLL
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 1 PSALSSVYLL 10
P+A+S+V+LL
Sbjct: 306 PNAVSAVFLL 315
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 PSALSSVYLL 10
P+A+S+V+LL
Sbjct: 306 PNAVSAVFLL 315
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PSALSSVYLL 10
P ALSS ++L
Sbjct: 8 PEALSSTFML 17
45|Sequence|221|230|SVYLLLFLAL
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 SVYLLLFL 8
SV+LL+FL
Sbjct: 4 SVFLLMFL 11
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 VYLLLFL 8
VYL LFL
Sbjct: 89 VYLALFL 95
46|Sequence|226|235|LFLALCTWWA
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLALCTWW 9
LFLA WW
Sbjct: 837 LFLARLIWW 845
>sp|UL15A_HCMVA|UNCHARACTERIZED protein UL15A|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LFLALCTWWA 10
L LC+W A
Sbjct: 87 LVFGLCSWLA 96
>sp|UL15A_HCMVM|UNCHARACTERIZED protein UL15A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LFLALCTWWA 10
L LC+W A
Sbjct: 87 LVFGLCSWLA 96
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLALCTWW 9
+FLA WW
Sbjct: 837 MFLARLIWW 845
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLALCTWW 9
+FLA WW
Sbjct: 837 VFLARLIWW 845
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLALCTWW 9
+FLA WW
Sbjct: 837 VFLARLIWW 845
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLALCTWW 9
+FLA WW
Sbjct: 837 VFLARLIWW 845
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 3 LALCTWWA 10
L +C +WA
Sbjct: 73 LNICNFWA 80
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 3 LALCTWWA 10
L +C +WA
Sbjct: 73 LNICNFWA 80
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 3 LALCTWWA 10
L +C +WA
Sbjct: 73 LNICNFWA 80
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 1 LFLALCT 7
LF+ LCT
Sbjct: 334 LFMILCT 340
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LFLALCT 7
LF+ LCT
Sbjct: 334 LFMILCT 340
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LFLALCT 7
LF+ LCT
Sbjct: 334 LFMILCT 340
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FLALCTWW 9
FLA WW
Sbjct: 838 FLARLIWW 845
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 LFLALCTW 8
+FL + TW
Sbjct: 32 IFLQMATW 39
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 ALCTWW 9
A+C +W
Sbjct: 1584 AICAYW 1589
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LFLALCTWW 9
L + LC W+
Sbjct: 200 LIVILCNWY 208
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 FLALC 6
FLALC
Sbjct: 685 FLALC 689
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 FLALC 6
FLALC
Sbjct: 685 FLALC 689
>sp|VIE3_HCMVT|30 kDa immediate-early protein 2|Human cytomegalovirus (strain Towne)
Query: 5 LCTW 8
+CTW
Sbjct: 264 MCTW 267
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 5 LCTWWA 10
+CT+W
Sbjct: 3452 VCTYWG 3457
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 4 ALCTWW 9
A+C +W
Sbjct: 1584 AICRYW 1589
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 6 CTWWA 10
CT+WA
Sbjct: 664 CTFWA 668
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 5 LCTWWA 10
+CT+W
Sbjct: 3452 VCTYWG 3457
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 FLALCT 7
FL++CT
Sbjct: 1297 FLSMCT 1302
47|Sequence|231|240|CTWWACHFPI
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 3 WWACHFP 9
W ACH P
Sbjct: 330 WMACHSP 336
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 CTWWACH 7
C WW C+
Sbjct: 846 CLWWTCY 852
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CTWWAC 6
C WW C
Sbjct: 3155 CRWWLC 3160
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 CTWWAC 6
C WW C
Sbjct: 3155 CRWWLC 3160
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CTWWACHF 8
C WW C+
Sbjct: 846 CLWWLCYL 853
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 4 WACHFP 9
W C FP
Sbjct: 2243 WTCMFP 2248
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 WACHFP 9
W C FP
Sbjct: 2270 WTCMFP 2275
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I93A0|NUCLEOPROTEIN A virus (strain A/Kitakyushu/159/1993
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I90A0|NUCLEOPROTEIN A virus (strain A/Shanghai/6/1990
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I89A4|NUCLEOPROTEIN A virus (strain A/Shanghai/16/1989
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I89A3|NUCLEOPROTEIN A virus (strain A/Guangdong/39/1989
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I89A2|NUCLEOPROTEIN A virus (strain A/Beijing/353/1989
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I89A1|NUCLEOPROTEIN A virus (strain A/Beijing/352/1989
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I89A0|NUCLEOPROTEIN A virus (strain A/Beijing/337/1989
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I88A3|NUCLEOPROTEIN A virus (strain A/Memphis/8/1988
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I88A2|NUCLEOPROTEIN A virus (strain A/Memphis/3/1988
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I87A2|NUCLEOPROTEIN A virus (strain A/Guangdong/9/1987
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I87A0|NUCLEOPROTEIN A virus (strain A/Shanghai/11/1987
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I86A1|NUCLEOPROTEIN A virus (strain A/Memphis/6/1986
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I85A0|NUCLEOPROTEIN A virus (strain A/Memphis/14/1985
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I83A8|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I83A0|NUCLEOPROTEIN A virus (strain A/Swine/Dandong/9/1983
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I80A4|NUCLEOPROTEIN A virus (strain A/Memphis/4/1980
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I80A3|NUCLEOPROTEIN A virus (strain A/Memphis/5/1980
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I80A0|NUCLEOPROTEIN A virus (strain A/Shanghai/31/1980
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I79A4|NUCLEOPROTEIN A virus (strain A/Kiev/59/1979
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I78A8|NUCLEOPROTEIN A virus (strain A/Memphis/18/1978
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I78A7|NUCLEOPROTEIN A virus (strain A/Memphis/2/1978
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I78A6|NUCLEOPROTEIN A virus (strain A/California/10/1978
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I77AH|NUCLEOPROTEIN A virus (strain A/Texas/1/1977
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I77A5|NUCLEOPROTEIN A virus (strain A/Guangdong/38/1977
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I77A4|NUCLEOPROTEIN A virus (strain A/Swine/Colorado/1/1977
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I76A6|NUCLEOPROTEIN A virus (strain A/Memphis/110/1976
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I75A0|NUCLEOPROTEIN A virus (strain A/Beijing/39/1975
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I54A0|NUCLEOPROTEIN A virus (strain A/Leningrad/1/1954
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I45A0|NUCLEOPROTEIN A virus (strain A/USA:Huston/AA/1945
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I43A0|NUCLEOPROTEIN A virus (strain A/USA:Iowa/1943
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I36A0|NUCLEOPROTEIN A virus (strain A/Henry/1936
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I35A3|NUCLEOPROTEIN A virus (strain A/USA:Phila/1935
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I35A1|NUCLEOPROTEIN A virus (strain A/Swine/Cambridge/1/1935
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I34A1|NUCLEOPROTEIN A virus (strain A/Puerto
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I33A0|NUCLEOPROTEIN A virus (strain A/Wilson-Smith/1933
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I18A0|NUCLEOPROTEIN A virus (strain A/Brevig
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I06A0|NUCLEOPROTEIN A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 3 WWACH 7
W ACH
Sbjct: 330 WMACH 334
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 4 WACHFP 9
W C FP
Sbjct: 176 WRCPFP 181
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 WACHFP 9
W C FP
Sbjct: 176 WRCPFP 181
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 4 WACHFP 9
W C FP
Sbjct: 176 WRCPFP 181
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 4 WACHFP 9
W C FP
Sbjct: 176 WRCPFP 181
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TWWA 5
TWWA
Sbjct: 987 TWWA 990
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 CTWWACH 7
CTW A H
Sbjct: 1000 CTWPASH 1006
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 CTWWACH 7
CTW A H
Sbjct: 1000 CTWPASH 1006
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 CTWWACH 7
CTW A H
Sbjct: 1002 CTWPASH 1008
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 CTWWACH 7
CTW A H
Sbjct: 1002 CTWPASH 1008
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TWWA 5
TWWA
Sbjct: 988 TWWA 991
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 TWWA 5
TWWA
Sbjct: 986 TWWA 989
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WACHFP 9
+ACH P
Sbjct: 390 FACHVP 395
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 WWACHF 8
WW C+
Sbjct: 848 WWLCYL 853
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 WWACHF 8
WW H+
Sbjct: 1863 WWQAHY 1868
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1009 CSWPATH 1015
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1000 CSWPASH 1006
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1000 CSWPASH 1006
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1000 CSWPASH 1006
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1000 CSWPASH 1006
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1000 CSWPASH 1006
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 CTWWACH 7
C+W A H
Sbjct: 1000 CSWPASH 1006
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 WACHFP 9
W+ H P
Sbjct: 898 WSAHLP 903
48|Sequence|236|245|CHFPISTRGF
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 FPISTRGF 10
FPI TRG+
Sbjct: 636 FPIHTRGY 643
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 HFPISTRG 9
HFP ST G
Sbjct: 613 HFPTSTHG 620
>sp|US34_HCMVA|PROTEIN US34|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CHFPIST 7
CH P+ST
Sbjct: 114 CHGPLST 120
>sp|US34_HCMVM|PROTEIN US34|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CHFPIST 7
CH P+ST
Sbjct: 114 CHGPLST 120
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 1 CHFPISTR 8
C FP STR
Sbjct: 113 CRFPNSTR 120
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 1 CHFPISTR 8
C FP STR
Sbjct: 112 CRFPNSTR 119
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 1 CHFPISTR 8
C FP STR
Sbjct: 113 CRFPNSTR 120
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 HFPIS 6
HFPIS
Sbjct: 581 HFPIS 585
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 3 FPISTRG 9
FP++T+G
Sbjct: 624 FPVTTQG 630
>sp|GH_HHV7J|ENVELOPE glycoprotein H|Human herpesvirus 7 (strain JI)
Query: 2 HFPISTRG 9
HF STRG
Sbjct: 301 HFLYSTRG 308
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 3 FPISTRG 9
FP++T+G
Sbjct: 605 FPLTTQG 611
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 3 FPISTRG 9
FP++T+G
Sbjct: 602 FPLTTQG 608
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 CHFPISTRGF 10
C FP T G+
Sbjct: 212 CKFPSVTHGY 221
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 3 FPISTRG 9
FPI T G
Sbjct: 574 FPIDTNG 580
>sp|PG060_MONPV|PROTEIN OPG060|Monkeypox virus (MPXV)
Query: 1 CHFPISTRG 9
C + IS RG
Sbjct: 113 CKYCISNRG 121
>sp|PG060_VARV|PROTEIN OPG060|Variola virus
Query: 1 CHFPISTRG 9
C + IS RG
Sbjct: 116 CKYCISNRG 124
>sp|PG060_VAR67|PROTEIN OPG060|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CHFPISTRG 9
C + IS RG
Sbjct: 116 CKYCISNRG 124
>sp|PG060_VACCC|PROTEIN OPG060|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CHFPISTRG 9
C + IS RG
Sbjct: 113 CKYCISNRG 121
>sp|PG060_VACCP|PROTEIN OPG060|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 CHFPISTRG 9
C + IS RG
Sbjct: 113 CKYCISNRG 121
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 1 CHFPIS 6
C+FP++
Sbjct: 299 CNFPVN 304
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 FPISTR 8
FPIST+
Sbjct: 116 FPISTK 121
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 FPISTR 8
FPIST+
Sbjct: 116 FPISTK 121
49|Sequence|241|250|STRGFSRLCV
>sp|VC17_VACCC|ANKYRIN repeat protein C17/B23|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TRGFSRLC 9
+RG RLC
Sbjct: 84 SRGVERLC 91
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 4 GFSRLC 9
GFS LC
Sbjct: 50 GFSHLC 55
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 3 RGFSRL 8
RGFSRL
Sbjct: 39 RGFSRL 44
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RGFSRLC 9
RG RLC
Sbjct: 123 RGLIRLC 129
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RGFSRLC 9
RG RLC
Sbjct: 123 RGLIRLC 129
>sp|DR3_HHV6U|UNCHARACTERIZED protein DR3|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 TRGFSR 7
TRGF+R
Sbjct: 158 TRGFAR 163
50|Sequence|246|255|SRLCVAVGCF
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LCVAVGC 9
LC AVGC
Sbjct: 133 LCAAVGC 139
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LCVAVGC 9
LC AVGC
Sbjct: 133 LCAAVGC 139
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 2 RLCVAVG 8
RLC AVG
Sbjct: 497 RLCEAVG 503
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 2 RLCVAVG 8
RLC AVG
Sbjct: 497 RLCEAVG 503
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1682 CLSVGC 1687
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1676 CLSVGC 1681
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1680 CLSVGC 1685
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1675 CLSVGC 1680
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1680 CLSVGC 1685
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1678 CLSVGC 1683
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 RLCVAVGC 9
R C+ GC
Sbjct: 1215 RACLTFGC 1222
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 RLCVAVGC 9
R C+ GC
Sbjct: 1215 RACLTFGC 1222
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 CVAVGC 9
C++VGC
Sbjct: 1679 CLSVGC 1684
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 3 LCVAVGC 9
LC A GC
Sbjct: 589 LCTAPGC 595
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 CVAVGC 9
C+A GC
Sbjct: 1678 CLATGC 1683
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 CVAVGC 9
C+A GC
Sbjct: 1678 CLATGC 1683
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 4 CVAVGC 9
C+A GC
Sbjct: 1678 CLATGC 1683
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 CVAVGC 9
C+A GC
Sbjct: 1678 CLATGC 1683
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 CVAVGC 9
C+A GC
Sbjct: 1678 CLATGC 1683
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 RLCVAV 7
+LCVAV
Sbjct: 971 KLCVAV 976
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 CVAVGC 9
C+A GC
Sbjct: 1678 CLATGC 1683
Query: 4 CVAVGCF 10
CV VG F
Sbjct: 3026 CVGVGIF 3032
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SRLCVAVG 8
S C+AVG
Sbjct: 756 SMTCIAVG 763
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SRLCVAVG 8
S C+AVG
Sbjct: 755 SMTCIAVG 762
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SRLCVAVG 8
S C+AVG
Sbjct: 756 SMTCIAVG 763
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SRLCVAVGCF 10
S++C V CF
Sbjct: 500 SKVCGPVYCF 509
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SRLCVAVG 8
S C+AVG
Sbjct: 756 SMTCIAVG 763
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 SRLCVAVG 8
S C+AVG
Sbjct: 756 SMTCIAVG 763
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 CVAVGC 9
CV+ GC
Sbjct: 881 CVSAGC 886
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 CVAVGCF 10
CV + CF
Sbjct: 602 CVRIQCF 608
51|Sequence|251|260|AVGCFGAGHL
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 AVGCFGAGH 9
VG FG GH
Sbjct: 48 GVGAFGPGH 56
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 GCFGA 7
GCFGA
Sbjct: 210 GCFGA 214
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 GCFGA 7
GCFGA
Sbjct: 210 GCFGA 214
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 GCFGAGH 9
GCFG H
Sbjct: 210 GCFGTLH 216
>sp|CEP2_EBVG|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 VGCFGAG 8
V C+GAG
Sbjct: 211 VTCYGAG 217
>sp|CEP2_EBVB9|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 VGCFGAG 8
V C+GAG
Sbjct: 211 VTCYGAG 217
>sp|CEP2_EBVA8|CYTOPLASMIC envelopment protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 VGCFGAG 8
V C+GAG
Sbjct: 211 VTCYGAG 217
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 AVGCFG 6
AVGC+G
Sbjct: 2369 AVGCWG 2374
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GCFGAGHL 10
GC G GH+
Sbjct: 206 GCGGFGHV 213
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 GCFGAGHL 10
GC G GH+
Sbjct: 206 GCGGFGHV 213
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CFGAGHL 10
CFG G L
Sbjct: 229 CFGRGRL 235
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CFGAGHL 10
CFG G L
Sbjct: 229 CFGRGRL 235
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 AVGCFGAG 8
AVG FGA
Sbjct: 1350 AVGIFGAA 1357
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 VGCFGA 7
+GC+GA
Sbjct: 602 IGCWGA 607
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 FGAGHL 10
FG GHL
Sbjct: 107 FGLGHL 112
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 FGAGHL 10
FG GHL
Sbjct: 107 FGLGHL 112
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 FGAGHL 10
FG GHL
Sbjct: 107 FGLGHL 112
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 1 AVGCFG 6
+GCFG
Sbjct: 76 GLGCFG 81
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 5 FGAGHL 10
FGAG+L
Sbjct: 1980 FGAGYL 1985
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 FGAGHL 10
FGAG+L
Sbjct: 1980 FGAGYL 1985
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 3 GCFGAG 8
GC G+G
Sbjct: 280 GCMGSG 285
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 3 GCFGAG 8
GC G+G
Sbjct: 278 GCMGSG 283
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 3 GCFGAG 8
GC G+G
Sbjct: 278 GCMGSG 283
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 3 GCFGAG 8
GC G+G
Sbjct: 280 GCMGSG 285
>sp|UL120_HCMVM|MEMBRANE protein UL120|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GCFGAG 8
G FGAG
Sbjct: 124 GTFGAG 129
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 GCFG 6
GCFG
Sbjct: 210 GCFG 213
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 GCFG 6
GCFG
Sbjct: 210 GCFG 213
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 5 FGAGHL 10
FG GH+
Sbjct: 659 FGGGHV 664
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 48 GVGAFGPG 55
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 48 GVGAFGPG 55
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 48 GVGAFGPG 55
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 FGAGH 9
+GAGH
Sbjct: 1004 YGAGH 1008
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 58 GVGAFGPG 65
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVA2|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 48 GVGAFGPG 55
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVA7|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 58 GVGAFGPG 65
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 58 GVGAFGPG 65
>sp|HBSAG_HBVA1|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
>sp|HBSAG_HBVA4|LARGE envelope protein|Hepatitis B virus genotype A2
Query: 1 AVGCFGAG 8
VG FG G
Sbjct: 59 GVGAFGPG 66
52|Sequence|256|265|GAGHLICLYC
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 1 GAGHLICLYC 10
G G ICL+C
Sbjct: 233 GLGKNICLFC 242
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 AGHLICLYC 10
G ICLYC
Sbjct: 3977 GGASICLYC 3985
Query: 3 GHLICLY 9
G+L+C Y
Sbjct: 3449 GYLVCTY 3455
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 AGHLICLYC 10
G ICLYC
Sbjct: 3977 GGASICLYC 3985
Query: 3 GHLICLY 9
G+L+C Y
Sbjct: 3449 GYLVCTY 3455
>sp|UL08_HCMVA|MEMBRANE protein UL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HLICLY 9
HLIC Y
Sbjct: 74 HLICFY 79
>sp|UL07_HCMVA|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HLICLY 9
HLIC Y
Sbjct: 74 HLICFY 79
>sp|UL07_HCMVM|CEACAM1-LIKE protein UL7|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HLICLY 9
HLIC Y
Sbjct: 74 HLICFY 79
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 GHLICLYC 10
GH I YC
Sbjct: 430 GHFIVAYC 437
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 GHLICLYC 10
GH I YC
Sbjct: 430 GHFIVAYC 437
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 3 GHLICLYC 10
HL CL C
Sbjct: 258 AHLQCLTC 265
>sp|UL95_HHV7J|PROTEIN U67|Human herpesvirus 7 (strain JI)
Query: 6 ICLYC 10
ICL+C
Sbjct: 267 ICLFC 271
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 1 GAGHLICL 8
AGH +C+
Sbjct: 572 AAGHRVCI 579
>sp|UL11P_HCMVM|PROTEIN UL11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GAGHLICLY 9
G G+++C++
Sbjct: 65 GQGYMLCIF 73
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 3 GHLICLY 9
GH IC++
Sbjct: 276 GHNICIF 282
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 GHLICLY 9
GH IC++
Sbjct: 276 GHNICIF 282
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 AGHLICLY 9
AG+L C Y
Sbjct: 515 AGYLSCWY 522
>sp|VE6_HPV51|PROTEIN E6|Human papillomavirus 51
Query: 4 HLICLYC 10
++C+YC
Sbjct: 27 QVVCVYC 33
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LICLYC 10
L+C YC
Sbjct: 120 LLCYYC 125
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 GHLIC 7
GH++C
Sbjct: 471 GHIVC 475
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 GAGHLICLY 9
AG++ C Y
Sbjct: 518 AAGYITCWY 526
>sp|Z_SABVB|RING finger protein Z|Sabia mammarenavirus (isolate
Query: 4 HLICLYC 10
H ICL C
Sbjct: 59 HYICLKC 65
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 522 AGYITCWY 529
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 518 AGYITCWY 525
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 518 AGYITCWY 525
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 516 AGYITCWY 523
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 517 AGYITCWY 524
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 518 AGYITCWY 525
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 AGHLICLY 9
AG++ C Y
Sbjct: 518 AGYITCWY 525
>sp|US32_HCMVM|PROTEIN US32|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 HLICLY 9
HL C+Y
Sbjct: 32 HLYCVY 37
>sp|US32_HCMVA|UNCHARACTERIZED protein HHRF7|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 HLICLY 9
HL C+Y
Sbjct: 32 HLYCVY 37
>sp|VE6_HPV65|PROTEIN E6|Human papillomavirus 65
Query: 4 HLICLYC 10
HL C++C
Sbjct: 24 HLTCIFC 30
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AGHLIC 7
AG+L+C
Sbjct: 425 AGNLVC 430
>sp|U79_HHV7J|PROTEIN U79|Human herpesvirus 7 (strain JI)
Query: 3 GHLIC 7
GH++C
Sbjct: 89 GHILC 93
53|Sequence|261|270|ICLYCYQMPL
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ICLYCYQ 7
+CL+CY
Sbjct: 763 LCLFCYH 769
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ICLYC 5
ICLYC
Sbjct: 3981 ICLYC 3985
Query: 1 ICLYCYQ 7
+CL+ YQ
Sbjct: 2025 MCLFSYQ 2031
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 2 CLYCY 6
C YCY
Sbjct: 120 CTYCY 124
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 ICLYC 5
ICLYC
Sbjct: 3981 ICLYC 3985
Query: 1 ICLYCYQ 7
+CL+ YQ
Sbjct: 2025 MCLFSYQ 2031
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 ICLYCYQM 8
+CLY YQ+
Sbjct: 152 VCLYLYQL 159
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 ICLYCYQM 8
+CLY YQ+
Sbjct: 152 VCLYLYQL 159
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 ICLYCYQM 8
+CLY YQ+
Sbjct: 152 VCLYLYQL 159
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 CLYCYQMPL 10
CLYC+ L
Sbjct: 239 CLYCHLQSL 247
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2397 CLFCYK 2402
Query: 1 ICLYC 5
+C+YC
Sbjct: 4305 VCIYC 4309
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2485 CLFCYK 2490
Query: 1 ICLYC 5
+C+YC
Sbjct: 4393 VCIYC 4397
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2397 CLFCYK 2402
Query: 1 ICLYC 5
+C+YC
Sbjct: 4305 VCIYC 4309
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2455 CLFCYK 2460
Query: 1 ICLYC 5
+C+YC
Sbjct: 4363 VCIYC 4367
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2485 CLFCYK 2490
Query: 1 ICLYC 5
+C+YC
Sbjct: 4393 VCIYC 4397
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 ICLYCYQM 8
+C+Y YQ+
Sbjct: 152 VCMYLYQL 159
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2435 CLFCYK 2440
Query: 1 ICLYC 5
+C+YC
Sbjct: 4343 VCIYC 4347
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2455 CLFCYK 2460
Query: 1 ICLYC 5
+C+YC
Sbjct: 4363 VCIYC 4367
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 ICLYC 5
+CLYC
Sbjct: 4310 VCLYC 4314
Query: 2 CLYCYQ 7
CL CY+
Sbjct: 2378 CLLCYK 2383
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 CLYCYQ 7
CL+CY+
Sbjct: 2435 CLFCYK 2440
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ICLYC 5
+CLYC
Sbjct: 4310 VCLYC 4314
Query: 2 CLYCYQ 7
CL CY+
Sbjct: 2378 CLLCYK 2383
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 CLYCYQMP 9
CLY Q+P
Sbjct: 282 CLYHPQLP 289
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 2 CLYCYQMPL 10
C Y +QM +
Sbjct: 92 CFYGFQMAI 100
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CLYCYQMPL 10
C Y +QM +
Sbjct: 92 CFYGFQMAI 100
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLYCYQMPL 10
C Y +QM +
Sbjct: 92 CFYGFQMAI 100
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 2 CLYCYQMPL 10
C Y +QM +
Sbjct: 92 CFYGFQMAI 100
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 2 CLYCYQMPL 10
C Y +QM +
Sbjct: 92 CFYGFQMAI 100
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 CLYCYQMP 9
CLY Q+P
Sbjct: 280 CLYHPQLP 287
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 ICLYCYQM 8
+C+Y YQ+
Sbjct: 152 VCMYLYQL 159
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 ICLYCYQM 8
+C+Y YQ+
Sbjct: 152 VCMYLYQL 159
>sp|GE_HHV2H|ENVELOPE glycoprotein E|Human herpesvirus 2 (strain HG52)
Query: 2 CLYCYQMP 9
CLY Q+P
Sbjct: 275 CLYHPQLP 282
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 4 YCYQ 7
YCYQ
Sbjct: 42 YCYQ 45
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 ICLYCYQM 8
+C+Y YQ+
Sbjct: 151 VCMYLYQL 158
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 YCYQ 7
YCYQ
Sbjct: 344 YCYQ 347
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 YCYQ 7
YCYQ
Sbjct: 351 YCYQ 354
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 ICLYCYQMPL 10
+ +Y Y +PL
Sbjct: 99 MSIYVYALPL 108
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ICLYCYQMPL 10
+ +Y Y +PL
Sbjct: 109 MSIYVYALPL 118
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ICLYCYQMPL 10
+ +Y Y +PL
Sbjct: 109 MSIYVYALPL 118
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 ICLYC 5
+C+YC
Sbjct: 4006 VCIYC 4010
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 ICLYC 5
+C+YC
Sbjct: 4006 VCIYC 4010
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ICLYCY 6
+CLY Y
Sbjct: 432 MCLYVY 437
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ICLYCY 6
+CLY Y
Sbjct: 432 MCLYVY 437
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CLYC 5
CLYC
Sbjct: 4327 CLYC 4330
>sp|PG122_VAR67|MRNA-DECAPPING protein OPG122|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 CLYCYQ 7
CL+C++
Sbjct: 41 CLWCHK 46
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 CLYC 5
CLYC
Sbjct: 4304 CLYC 4307
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CLYC 5
CLYC
Sbjct: 4327 CLYC 4330
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ICLYC 5
+C YC
Sbjct: 68 LCFYC 72
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ICLYC 5
+C YC
Sbjct: 68 LCFYC 72
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 CLYC 5
CLYC
Sbjct: 4304 CLYC 4307
>sp|PG122_MONPV|MRNA-DECAPPING protein OPG122|Monkeypox virus (MPXV)
Query: 2 CLYCYQ 7
CL+C++
Sbjct: 41 CLWCHK 46
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 5 CYQMPL 10
CY PL
Sbjct: 250 CYMQPL 255
>sp|PG122_VACCC|MRNA-DECAPPING protein OPG122|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLYCYQ 7
CL+C++
Sbjct: 41 CLWCHK 46
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 CLYCYQ 7
CL CY
Sbjct: 690 CLLCYH 695
>sp|TAT_HV192|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 2 CLYCYQ 7
CL C+Q
Sbjct: 34 CLVCFQ 39
54|Sequence|266|275|YQMPLAQALL
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 YQMPLAQ 7
YQ+PLA+
Sbjct: 547 YQVPLAE 553
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 4 PLAQALL 10
PLA ALL
Sbjct: 344 PLADALL 350
55|Sequence|271|280|AQALLPPAGI
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 2 QALLPPAG 9
Q LPP G
Sbjct: 50 QCFLPPKG 57
>sp|PHOSP_VSNJO|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 3 ALLPPAGI 10
+L PP G+
Sbjct: 118 SLFPPVGL 125
>sp|PHOSP_VSNJM|PHOSPHOPROTEIN stomatitis New Jersey virus
Query: 3 ALLPPAGI 10
+L PP G+
Sbjct: 118 SLFPPVGL 125
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 2 QALLPPAG 9
Q LLPP G
Sbjct: 108 QFLLPPLG 115
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 6 PPAGI 10
PPAG+
Sbjct: 2895 PPAGV 2899
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 4 LLPPAG 9
LLPP G
Sbjct: 53 LLPPVG 58
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 3 ALLPPAG 9
A LPP G
Sbjct: 323 AFLPPEG 329
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 2 QALLPPAGI 10
Q L+PP G+
Sbjct: 108 QFLVPPLGL 116
56|Sequence|276|285|PPAGIWARVL
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AGIWARVL 10
A IWARVL
Sbjct: 300 AAIWARVL 307
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 PAGIWAR 8
PAG W R
Sbjct: 1002 PAGTWER 1008
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 PPAGIW 6
PP G W
Sbjct: 76 PPVGYW 81
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 AGIWARVL 10
AG+WA V+
Sbjct: 2051 AGVWAPVM 2058
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 PPAGIWARV 9
PPA ++AR+
Sbjct: 665 PPANLYARL 673
Query: 1 PPAGIWARVL 10
PP +WA L
Sbjct: 325 PPDDVWAAAL 334
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 PPAGIW 6
PP G W
Sbjct: 76 PPNGYW 81
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 1 PPAGIWARV 9
PP +WA++
Sbjct: 667 PPVRLWAQL 675
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 1 PPAGIWARV 9
PP +WA++
Sbjct: 667 PPVRLWAQL 675
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 1 PPAGIWARV 9
PP +WA++
Sbjct: 665 PPVRLWAQL 673
>sp|ORF10_HHV8P|PROTEIN ORF10|Human herpesvirus 8 type P
Query: 2 PAGIWAR 8
P GIW R
Sbjct: 101 PIGIWVR 107
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 PPAGIWARV 9
PP IW V
Sbjct: 602 PPGWIWQNV 610
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PPAGIWAR 8
PP +WA+
Sbjct: 655 PPKRVWAQ 662
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PPAGIWAR 8
PP +WA+
Sbjct: 655 PPKRVWAQ 662
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 PPAGIWARV 9
PP +WA++
Sbjct: 665 PPVRLWAQL 673
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PPAGIWAR 8
PP +WA+
Sbjct: 655 PPKRVWAQ 662
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PPAGIW 6
PPAG W
Sbjct: 545 PPAGAW 550
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 PPAGIWARVL 10
PPA ARVL
Sbjct: 14 PPAQPVARVL 23
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 1 PPAGIWARV 9
PP IW V
Sbjct: 601 PPGWIWKNV 609
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 PPAGIWAR 8
PP +WA+
Sbjct: 654 PPKRVWAQ 661
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 PPAGIWAR 8
PP +WA+
Sbjct: 653 PPKRVWAQ 660
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 PPAGIWARVL 10
PPA ARVL
Sbjct: 14 PPAQPVARVL 23
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 PAGIW 6
P GIW
Sbjct: 1177 PIGIW 1181
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 PAGIW 6
P GIW
Sbjct: 1178 PIGIW 1182
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PPAGIW 6
PPAG W
Sbjct: 545 PPAGNW 550
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 PAGIW 6
P GIW
Sbjct: 1226 PIGIW 1230
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 PPAGIWARV 9
PP +W V
Sbjct: 601 PPGWVWNNV 609
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 2 PAGIW 6
P+G+W
Sbjct: 248 PSGVW 252
>sp|POLS_RRV2|STRUCTURAL polyprotein|Ross river virus (strain 213970)
Query: 1 PPAGIWA 7
PP +WA
Sbjct: 333 PPVRLWA 339
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PPAGIW 6
PPAG W
Sbjct: 544 PPAGGW 549
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PPAGIWARVL 10
PP G W VL
Sbjct: 1106 PPHGRWRAVL 1115
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PPAGIWARVL 10
PP G W VL
Sbjct: 1105 PPHGRWRAVL 1114
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PPAGIWARVL 10
PP G W VL
Sbjct: 1102 PPHGRWRAVL 1111
57|Sequence|281|290|WARVLGLKDF
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 WARVLGLKD 9
W V G+KD
Sbjct: 1671 WCNVCGIKD 1679
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WARVLGLKD 9
W V G+KD
Sbjct: 1671 WCNVCGIKD 1679
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 RVLGLKDF 10
RVLG K F
Sbjct: 118 RVLGFKSF 125
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 3 RVLGLKDF 10
RVLG K F
Sbjct: 118 RVLGFKSF 125
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 ARVLGLK 8
+RVLGLK
Sbjct: 2114 SRVLGLK 2120
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ARVLGLK 8
+RVLGLK
Sbjct: 2114 SRVLGLK 2120
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 WARVLGLKDF 10
WA + G DF
Sbjct: 443 WAAIHGYMDF 452
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 WARVLGLKDF 10
WA G DF
Sbjct: 470 WAAFYGYSDF 479
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 4 VLGLKDF 10
++G KDF
Sbjct: 655 IIGFKDF 661
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 4 VLGLKDF 10
++G KDF
Sbjct: 655 IIGFKDF 661
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 4 VLGLKDF 10
++G KDF
Sbjct: 657 IIGFKDF 663
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 WARVLG 6
WA +LG
Sbjct: 1119 WAHILG 1124
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 RVLGLKD 9
RVLGL++
Sbjct: 186 RVLGLRE 192
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 WARVLGLKD 9
WA +LG K+
Sbjct: 1003 WASLLGGKN 1011
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 WARVLGLKD 9
WA +LG K+
Sbjct: 1003 WASLLGGKN 1011
>sp|VFUS_VACC6|14 kDa fusion protein|Vaccinia virus (strain WR 65-16)
Query: 1 WARVLGLKD 9
W+R+ L+D
Sbjct: 63 WSRIRPLED 71
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 WARVLGLKDF 10
W R + + DF
Sbjct: 975 WRRDMSVNDF 984
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 WARVLGLKDF 10
W R + + DF
Sbjct: 975 WRRDMSVNDF 984
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 ARVLGL 7
ARVLGL
Sbjct: 1316 ARVLGL 1321
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 1 WARVLGLK 8
WA + GLK
Sbjct: 161 WADLQGLK 168
58|Sequence|286|295|GLKDFVGPTN
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 LKDFVGP 8
L+D++GP
Sbjct: 281 LRDYLGP 287
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 LKDFVGP 8
L+D++GP
Sbjct: 281 LRDYLGP 287
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 3 KDFVGPTN 10
+ FVGP N
Sbjct: 95 QQFVGPLN 102
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 2 LKDFVGP 8
+ DF+GP
Sbjct: 525 VSDFIGP 531
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 2 LKDFVGP 8
+ DF+GP
Sbjct: 525 VSDFIGP 531
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 KDFVGPTN 10
+ FVGP N
Sbjct: 93 QQFVGPLN 100
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DFVGP 8
DF+GP
Sbjct: 1517 DFIGP 1521
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 4 DFVGP 8
DF+GP
Sbjct: 1517 DFIGP 1521
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GLKDFVG 7
G KD++G
Sbjct: 911 GFKDYIG 917
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GLKDFVG 7
G KD++G
Sbjct: 911 GFKDYIG 917
>sp|PG163_VACCC|PROTEIN OPG163|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LKDFVGP 8
+ DF+GP
Sbjct: 27 IMDFIGP 33
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 KDFVGP 8
K FVGP
Sbjct: 93 KQFVGP 98
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 KDFVGP 8
K FVGP
Sbjct: 93 KQFVGP 98
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 KDFVGP 8
K FVGP
Sbjct: 93 KQFVGP 98
>sp|PG163_MONPV|PROTEIN OPG163|Monkeypox virus (MPXV)
Query: 2 LKDFVGP 8
+ DF+GP
Sbjct: 27 IMDFIGP 33
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 KDFVGP 8
K FVGP
Sbjct: 93 KQFVGP 98
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 KDFVGP 8
K FVGP
Sbjct: 93 KQFVGP 98
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 GLKDFV 6
GLKD+V
Sbjct: 1840 GLKDYV 1845
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 KDFVGP 8
K FVGP
Sbjct: 93 KQFVGP 98
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 LKDFVGP 8
LK+ VGP
Sbjct: 5149 LKEIVGP 5155
>sp|A35_VAR67|TRUNCATED protein A35 homolog|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LKDFVGP 8
+ DF+GP
Sbjct: 27 IMDFIGP 33
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 GLKDFV 6
G KDFV
Sbjct: 659 GFKDFV 664
59|Sequence|291|300|VGPTNCSSPH
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 6 CSSPH 10
CSSPH
Sbjct: 504 CSSPH 508
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 6 CSSPH 10
CSSPH
Sbjct: 504 CSSPH 508
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 VGPTNCSSPH 10
VGP CS H
Sbjct: 1900 VGPRTCSLVH 1909
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 VGPTNCSSPH 10
VGP CS H
Sbjct: 1900 VGPRTCSLVH 1909
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 VGPTNCSSPH 10
VGP N PH
Sbjct: 295 VGPANAKVPH 304
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 VGPTNCSSPH 10
VGP N PH
Sbjct: 295 VGPANAKVPH 304
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 VGPTNCSSPH 10
VGP N PH
Sbjct: 295 VGPANAKVPH 304
>sp|CXCL1_HCMVM|CHEMOKINE vCXCL1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GPTNCSSPH 10
GP C SPH
Sbjct: 72 GPGVCLSPH 80
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1900 NCSSP 1904
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1899 NCSSP 1903
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 1 VGPTNCSSP 9
V P CS P
Sbjct: 94 VSPIQCSEP 102
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 5 NCSSP 9
NCSSP
Sbjct: 1900 NCSSP 1904
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGPTNCSS 8
VGP CSS
Sbjct: 2047 VGPKTCSS 2054
>sp|YVDB_VACCC|UNCHARACTERIZED 8.5 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VGPTNC 6
+GP+NC
Sbjct: 22 IGPSNC 27
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 3 PTNCSSP 9
PTNC +P
Sbjct: 1161 PTNCIAP 1167
>sp|Z_LYCVP|RING finger protein Z|Lymphocytic choriomeningitis virus (strain
Query: 1 VGPTNCSS 8
+GP NC S
Sbjct: 6 LGPLNCKS 13
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 5 NCSSP 9
NC+SP
Sbjct: 63 NCASP 67
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 VGPTNCSSPH 10
+GP+ C PH
Sbjct: 605 LGPSCCIEPH 614
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 VGPTNCSSPH 10
+GP+ C PH
Sbjct: 605 LGPSCCIEPH 614
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 VGPTNCSSPH 10
+GP+ C PH
Sbjct: 605 LGPSCCIEPH 614
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 GPTNCSSP 9
GP + SSP
Sbjct: 206 GPASFSSP 213
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 NCSSPH 10
NC PH
Sbjct: 42 NCRIPH 47
>sp|VGP_EBOSM|ENVELOPE glycoprotein|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|VGP_EBOSB|ENVELOPE glycoprotein|Sudan ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 NCSSPH 10
NC PH
Sbjct: 42 NCRIPH 47
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 VGPTNCSSP 9
+GP N S P
Sbjct: 472 LGPANISGP 480
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 NCSSPH 10
NC PH
Sbjct: 42 NCRIPH 47
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 NCSSPH 10
NC PH
Sbjct: 42 NCRIPH 47
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 1 VGPTNCSSPH 10
+GP C PH
Sbjct: 604 LGPDCCIEPH 613
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 4 TNCSSPH 10
T C +PH
Sbjct: 294 TKCQTPH 300
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 4 TNCSSPH 10
T C +PH
Sbjct: 294 TKCQTPH 300
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 4 TNCSSPH 10
T C +PH
Sbjct: 294 TKCQTPH 300
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGPTNCS 7
VGP CS
Sbjct: 2047 VGPKTCS 2053
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 4 TNCSSPH 10
T C +PH
Sbjct: 294 TRCQTPH 300
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 GPTNC 6
GPT C
Sbjct: 353 GPTTC 357
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VGPTNCS 7
VGP CS
Sbjct: 2047 VGPKTCS 2053
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 4 TNCSSPH 10
T C +PH
Sbjct: 294 TRCQTPH 300
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 GPTNC 6
GPT C
Sbjct: 353 GPTTC 357
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGPTNCS 7
VGP CS
Sbjct: 2047 VGPKTCS 2053
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 VGPTNCS 7
VGP CS
Sbjct: 2047 VGPKTCS 2053
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 VGPTNCS 7
VGP CS
Sbjct: 2047 VGPKTCS 2053
60|Sequence|296|305|CSSPHALVLN
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 SSPHALVL 9
SSPHAL+L
Sbjct: 568 SSPHALLL 575
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 CSSPHAL 7
CSSPH L
Sbjct: 504 CSSPHLL 510
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 SSPHALVL 9
SSPH L+L
Sbjct: 1754 SSPHRLIL 1761
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 SSPHALVL 9
SSPH L+L
Sbjct: 1754 SSPHRLIL 1761
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PHALVLN 10
PHALVL+
Sbjct: 1142 PHALVLH 1148
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PHALVLN 10
PHALVL+
Sbjct: 1142 PHALVLH 1148
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PHALVLN 10
PHALVL+
Sbjct: 1142 PHALVLH 1148
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 CSSPHALV 8
C SPH ++
Sbjct: 52 CDSPHRIL 59
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 CSSPHALV 8
C SPH ++
Sbjct: 68 CDSPHRIL 75
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 1 CSSPHALV 8
C SPH ++
Sbjct: 52 CDSPHRIL 59
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 CSSPHALV 8
C SPH ++
Sbjct: 68 CDSPHRIL 75
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 CSSPHALV 8
C SPH ++
Sbjct: 68 CDSPHRIL 75
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 CSSPHALV 8
C SPH ++
Sbjct: 68 CDSPHRIL 75
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 52 CNNPHKIL 59
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 52 CNNPHKIL 59
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 2 SSPHALV 8
S+PH LV
Sbjct: 484 STPHTLV 490
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 52 CNNPHKIL 59
>sp|HEMA_I000X|HEMAGGLUTININ A virus (strain A/X-31
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 4 PHALV 8
PHALV
Sbjct: 1142 PHALV 1146
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CSSPHALVL 9
C+S HAL +
Sbjct: 142 CTSCHALFM 150
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CSSPHALVL 9
C+S HAL +
Sbjct: 142 CTSCHALFM 150
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CSSPHALVL 9
C+S HAL +
Sbjct: 142 CTSCHALFM 150
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 4 PHALV 8
PHALV
Sbjct: 1142 PHALV 1146
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 PHALV 8
PHALV
Sbjct: 1141 PHALV 1145
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 69 CNNPHRIL 76
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 CSSPHALV 8
C++PH ++
Sbjct: 68 CNNPHRIL 75
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 PHALV 8
PHALV
Sbjct: 1158 PHALV 1162
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 PHALV 8
PHALV
Sbjct: 1158 PHALV 1162
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 4 PHALV 8
PHALV
Sbjct: 1142 PHALV 1146
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 4 PHALV 8
PHALV
Sbjct: 1146 PHALV 1150
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 SSPHALVL 9
S+PH LV+
Sbjct: 1753 SNPHRLVV 1760
61|Sequence|301|310|ALVLNTGLDW
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1819 NTGFDW 1824
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1819 NTGFDW 1824
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1819 NTGFDW 1824
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1819 NTGFDW 1824
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1819 NTGFDW 1824
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 ALVLNTGLDW 10
AL+L++ L W
Sbjct: 1346 ALILSSSLKW 1355
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 ALVLNTGLDW 10
AL+L++ L W
Sbjct: 1346 ALILSSSLKW 1355
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LVLNTGLDW 10
LV+N +DW
Sbjct: 107 LVINVVIDW 115
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 ALVLNTGLDW 10
AL TGL W
Sbjct: 175 ALKYGTGLQW 184
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LVLNTGLD 9
L+L++GLD
Sbjct: 130 LILDSGLD 137
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LVLNTGLD 9
L+L++GLD
Sbjct: 130 LILDSGLD 137
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LVLNTGLD 9
L+L++GLD
Sbjct: 130 LILDSGLD 137
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1834 NTGHDW 1839
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1834 NTGHDW 1839
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1834 NTGHDW 1839
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1834 NTGHDW 1839
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1834 NTGHDW 1839
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 5 NTGLDW 10
NTG DW
Sbjct: 1834 NTGHDW 1839
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 VLNTGLD 9
+LN GLD
Sbjct: 2321 ILNVGLD 2327
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 ALVLNTGLD 9
++ LNTG D
Sbjct: 395 SIPLNTGFD 403
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 ALVLNTGLD 9
++ LNTG D
Sbjct: 393 SIPLNTGFD 401
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 4 LNTGLD 9
LN+GLD
Sbjct: 55 LNSGLD 60
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 NTGLDW 10
+TG DW
Sbjct: 1849 STGFDW 1854
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 NTGLDW 10
N+G DW
Sbjct: 1821 NSGYDW 1826
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 NTGLDW 10
N+G DW
Sbjct: 1821 NSGYDW 1826
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 LVLNTGLDW 10
+VLN +W
Sbjct: 9 IVLNATFEW 17
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 LVLNTGLDW 10
+VLN +W
Sbjct: 9 IVLNATFEW 17
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 LVLNTGL 8
LVL TGL
Sbjct: 316 LVLTTGL 322
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 LVLNTGLDW 10
++LN +DW
Sbjct: 465 IMLNGYIDW 473
62|Sequence|306|315|TGLDWPVYAS
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 TGLDWPVY 8
+ L WP+Y
Sbjct: 583 SALQWPIY 590
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TGLDWPVY 8
+ L WP+Y
Sbjct: 588 SSLQWPMY 595
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TGLDWPVY 8
+ L WP+Y
Sbjct: 588 SSLQWPMY 595
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TGLDWPVY 8
+ L WP+Y
Sbjct: 588 SSLQWPMY 595
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 GLDWPVYAS 10
G DW +Y S
Sbjct: 1114 GTDWFLYVS 1122
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 GLDWPVYAS 10
G DW +Y S
Sbjct: 1114 GTDWFLYVS 1122
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 1 TGLDWPVY 8
+G+D PVY
Sbjct: 400 SGIDVPVY 407
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 GLDWPVYAS 10
G DW +Y S
Sbjct: 1113 GTDWFLYVS 1121
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 GLDWPVYAS 10
G DW +Y S
Sbjct: 1114 GTDWFMYVS 1122
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GLDWPVYAS 10
G WP+YA+
Sbjct: 80 GYPWPLYAN 88
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 GLDWPVYAS 10
G WP+YA+
Sbjct: 80 GYPWPLYAN 88
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 TGLDWPV 7
TGLD PV
Sbjct: 389 TGLDTPV 395
>sp|TERM_ADE12|PRETERMINAL protein|Human adenovirus A serotype 12
Query: 3 LDWPVY 8
L WP+Y
Sbjct: 36 LGWPLY 41
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 1 TGLDWPVYA 9
TG D P+++
Sbjct: 397 TGFDIPIFS 405
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 LDWPVYA 9
++WP+Y
Sbjct: 271 VNWPLYG 277
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 LDWPVYA 9
++WP+Y
Sbjct: 271 VNWPLYG 277
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 3 LDWPVY 8
L WP+Y
Sbjct: 71 LRWPLY 76
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 3 LDWPVY 8
L WP+Y
Sbjct: 71 LRWPLY 76
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 GLDWPVYAS 10
G WP+Y S
Sbjct: 80 GYPWPLYGS 88
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 3 LDWPVY 8
L WP+Y
Sbjct: 71 LRWPLY 76
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 TGLDWPVY 8
TGL W V+
Sbjct: 180 TGLQWDVH 187
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 LDWPVY 8
L WP+Y
Sbjct: 1166 LIWPIY 1171
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 2 GLDWPVY 8
G+D PVY
Sbjct: 398 GVDVPVY 404
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 2 GLDWPVY 8
G+D PVY
Sbjct: 397 GVDVPVY 403
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 4 DWPVYA 9
DW +YA
Sbjct: 455 DWSLYA 460
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 DWPVYAS 10
+WP Y S
Sbjct: 106 EWPEYLS 112
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TGLDW 5
TG DW
Sbjct: 1820 TGFDW 1824
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 TGLDW 5
TG DW
Sbjct: 1820 TGFDW 1824
63|Sequence|311|320|PVYASPGVLL
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 PVYASPGVL 9
P+Y S GVL
Sbjct: 330 PLYTSTGVL 338
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 PVYASPGVL 9
P+Y S GVL
Sbjct: 330 PLYTSTGVL 338
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 PVYASPGVL 9
P+Y S GVL
Sbjct: 330 PLYTSTGVL 338
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PVYASPG 7
PVY +PG
Sbjct: 333 PVYVTPG 339
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PVYASPGVL 9
P+Y S GVL
Sbjct: 330 PLYTSTGVL 338
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PVYASPGVLL 10
PVY SPG+
Sbjct: 111 PVYLSPGLFF 120
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 PVYASPG 7
PVY +PG
Sbjct: 335 PVYITPG 341
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 PVYASPG 7
PVY +PG
Sbjct: 335 PVYITPG 341
>sp|ORF23_TTVV5|PROBABLE protein VP2|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 1 PVYASPGV 8
PV+ +PG+
Sbjct: 6 PVHDAPGI 13
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PVYASPG 7
P++A+PG
Sbjct: 2288 PIWATPG 2294
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 1 PVYASP 6
PVYA P
Sbjct: 204 PVYADP 209
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 VYASPGV 8
VY SPG+
Sbjct: 245 VYLSPGL 251
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PVYASPG 7
PV+A PG
Sbjct: 2287 PVWARPG 2293
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PVYASPG 7
PV+ +PG
Sbjct: 333 PVFITPG 339
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 2 VYASPG 7
+YA PG
Sbjct: 203 IYAEPG 208
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 YASPGVL 9
+A+PGVL
Sbjct: 1892 HANPGVL 1898
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PVYASPG 7
P++A PG
Sbjct: 2287 PIWARPG 2293
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 VYASPGV 8
VY+SP V
Sbjct: 438 VYSSPNV 444
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VYASPGV 8
VY+SP V
Sbjct: 438 VYSSPNV 444
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 VYASPGV 8
VY+SP V
Sbjct: 438 VYSSPNV 444
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 VYASPGV 8
VY+SP V
Sbjct: 438 VYSSPNV 444
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 VYASPGV 8
VY+SP V
Sbjct: 438 VYSSPNV 444
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 VYASPGV 8
VY+SP V
Sbjct: 438 VYSSPNV 444
64|Sequence|316|325|PGVLLLLCYA
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 GVLLLLCYA 10
G LLL CY
Sbjct: 2360 GFLLLGCYG 2368
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGVLLLLC 8
PG +LL C
Sbjct: 221 PGFVLLRC 228
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 LLLCY 9
LLLCY
Sbjct: 138 LLLCY 142
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 5 LLLCY 9
LLLCY
Sbjct: 171 LLLCY 175
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 5 LLLCY 9
LLLCY
Sbjct: 141 LLLCY 145
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGVLLLLC 8
PG LL C
Sbjct: 230 PGFFLLRC 237
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 PGVLLLLC 8
PG+ LL C
Sbjct: 222 PGLCLLRC 229
>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)
Query: 2 GVLLLLC 8
G++LL C
Sbjct: 104 GIILLFC 110
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 PGVLLLLCYA 10
PGV LC+
Sbjct: 132 PGVRYPLCFG 141
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GVLLLLCY 9
G LL+ CY
Sbjct: 1378 GGLLIACY 1385
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GVLLLLCY 9
G LL+ CY
Sbjct: 1378 GGLLIACY 1385
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GVLLLLCY 9
G LL+ CY
Sbjct: 1378 GGLLIACY 1385
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GVLLLLCY 9
G LL+ CY
Sbjct: 1378 GGLLIACY 1385
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 GVLLLLCY 9
G LL+ CY
Sbjct: 1378 GGLLIACY 1385
65|Sequence|321|330|LLCYATASLR
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 LCYATASLR 10
LC++T SLR
Sbjct: 736 LCFSTLSLR 744
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 LCYATASLR 10
LC++T SLR
Sbjct: 736 LCFSTLSLR 744
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 LCYATASLR 10
LC++T SLR
Sbjct: 731 LCFSTLSLR 739
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 LCYATASLR 10
LC++T SLR
Sbjct: 731 LCFSTLSLR 739
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1733 LMCHATFTMR 1742
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1733 LMCHATFTMR 1742
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1733 LMCHATFTMR 1742
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1733 LMCHATFTMR 1742
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1733 LMCHATFTMR 1742
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1324 LMCHATFTMR 1333
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1735 LMCHATFTMR 1744
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1734 LMCHATFTMR 1743
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 LLCYATASLR 10
L+C+AT ++R
Sbjct: 1735 LMCHATFTMR 1744
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 LCYATASLR 10
LC++T SLR
Sbjct: 731 LCFSTLSLR 739
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 LCYATASLR 10
LC++T SLR
Sbjct: 731 LCFSTLSLR 739
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1733 LMCHATFTTR 1742
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1733 LMCHATFTTR 1742
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1733 LMCHATFTTR 1742
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1733 LMCHATFTTR 1742
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1733 LMCHATFTTR 1742
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 3 CYATASLR 10
CY TAS R
Sbjct: 259 CYYTASDR 266
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 3 CYATASLR 10
CY T S+R
Sbjct: 287 CYNTHSIR 294
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 3 CYATASLR 10
CY T S+R
Sbjct: 284 CYNTHSIR 291
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1762 LMCHATFTSR 1771
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1762 LMCHATFTSR 1771
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1758 LMCHATFTSR 1767
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 LLCYATASLR 10
L+C+AT + R
Sbjct: 1763 LMCHATFTSR 1772
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 CYATASLR 10
CY T S+R
Sbjct: 292 CYNTNSIR 299
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LLCYATASLR 10
++C+AT + R
Sbjct: 1748 VMCHATLTYR 1757
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 CYATASLR 10
CY T S+R
Sbjct: 292 CYNTNSIR 299
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 3 CYATAS 8
CY TAS
Sbjct: 277 CYYTAS 282
>sp|NP04_HHV11|NUCLEAR protein UL4|Human herpesvirus 1 (strain 17)
Query: 2 LCYATASL 9
LC+A ASL
Sbjct: 12 LCHARASL 19
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 LLCYATASLR 10
++C+AT + R
Sbjct: 1758 VMCHATLTAR 1767
66|Sequence|326|335|TASLRKLRAY
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 5 RKLRAY 10
RKLRAY
Sbjct: 1021 RKLRAY 1026
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 ASLRKLRA 9
ASLRKL A
Sbjct: 2915 ASLRKLGA 2922
67|Sequence|331|340|KLRAYRPSGQ
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 RAYRPSGQ 10
RA+RP+G+
Sbjct: 1454 RAFRPTGE 1461
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 RAYRPSGQ 10
RA+RP+G+
Sbjct: 1452 RAFRPTGE 1459
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 RAYRPSG 9
RA+RP+G
Sbjct: 1455 RAFRPTG 1461
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 3 RAYRPSG 9
RA+RP+G
Sbjct: 1454 RAFRPTG 1460
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 3 RAYRPSG 9
RA+RP+G
Sbjct: 1454 RAFRPTG 1460
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 YRPSGQ 10
YRP+GQ
Sbjct: 2289 YRPTGQ 2294
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 5 YRPSGQ 10
YRP+GQ
Sbjct: 2316 YRPTGQ 2321
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 KLRAYRPSGQ 10
+LR Y+P Q
Sbjct: 826 RLRGYKPLTQ 835
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 4 AYRPS 8
AYRPS
Sbjct: 160 AYRPS 164
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 4 AYRPS 8
AYRPS
Sbjct: 131 AYRPS 135
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 3 RAYRPSG 9
R YRP G
Sbjct: 212 RRYRPIG 218
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 RAYRPSG 9
R YRP G
Sbjct: 212 RRYRPIG 218
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 RAYRPSGQ 10
R YRPS +
Sbjct: 1655 REYRPSQE 1662
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 KLRAYR 6
K+RAYR
Sbjct: 126 KIRAYR 131
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 KLRAYR 6
K+RAYR
Sbjct: 126 KIRAYR 131
68|Sequence|336|345|RPSGQRKEAA
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 PSGQRKE 8
P GQRKE
Sbjct: 2055 PGGQRKE 2061
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 RPSGQR 6
RP GQR
Sbjct: 649 RPGGQR 654
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 PSGQRKEAA 10
PS Q EAA
Sbjct: 2413 PSSQEGEAA 2421
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 RPSGQRKE 8
RP GQ+ E
Sbjct: 1943 RPPGQQME 1950
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 RPSGQRKE 8
RP GQ+ E
Sbjct: 1943 RPPGQQME 1950
69|Sequence|341|350|RKEAAKGYEA
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 3 EAAKGY 8
EAA+GY
Sbjct: 1157 EAARGY 1162
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 4 AAKGYEA 10
AA+GYE+
Sbjct: 1031 AAEGYES 1037
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 3 EAAKGY 8
EAA+GY
Sbjct: 1157 EAARGY 1162
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 EAAKGY 8
EAA+GY
Sbjct: 1157 EAARGY 1162
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 KEAAKGY 8
+EAAK Y
Sbjct: 786 REAAKAY 792
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 2 KEAAKGYE 9
KE+ GYE
Sbjct: 368 KESRSGYE 375
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 AAKGYE 9
AAKGY+
Sbjct: 1245 AAKGYK 1250
70|Sequence|346|355|KGYEARELEL
>sp|VE2_HPV54|REGULATORY protein E2|Human papillomavirus type 54
Query: 1 KGYEARELEL 10
KG++A EL+L
Sbjct: 68 KGHKAIELQL 77
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 KGYEARELEL 10
KG+ A EL+L
Sbjct: 69 KGHNAIELQL 78
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 KGYEARELEL 10
K Y+A EL++
Sbjct: 73 KAYQAIELQM 82
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GYEAREL 8
G+E REL
Sbjct: 1744 GFEIREL 1750
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYEAREL 8
G+EAR+L
Sbjct: 445 GHEARQL 451
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 KGYEARELEL 10
K Y+A EL++
Sbjct: 73 KAYQAIELQM 82
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYEAREL 8
G+EAR+L
Sbjct: 447 GHEARQL 453
71|Sequence|351|360|RELELAELDQ
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 3 LELAELDQ 10
LELA +DQ
Sbjct: 1351 LELAPVDQ 1358
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 384 MELAEID 390
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 384 MELAEID 390
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 384 MELAEID 390
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 384 MELAEID 390
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 385 MELAEID 391
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 385 MELAEID 391
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 384 MELAEID 390
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 LELAELD 9
+ELAE+D
Sbjct: 385 MELAEID 391
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 ELELAELD 9
E ELA+LD
Sbjct: 325 ENELADLD 332
72|Sequence|356|365|AELDQWPQER
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 2 ELDQW 6
ELDQW
Sbjct: 1236 ELDQW 1240
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 452 SELDQYPLGR 461
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 452 SELDQYPLGR 461
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 DQWPQER 10
D+WP ER
Sbjct: 1461 DRWPTER 1467
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 452 SELDQYPLGR 461
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 453 SELDQFPLGR 462
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 487 ADLDQFPLGR 496
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 454 SELDQYPLGR 463
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 457 ADLDQFPLGR 466
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 486 ADLDQFPLGR 495
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 482 ADLDQFPLGR 491
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 455 ADLDQFPLGR 464
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 458 ADLDQFPLGR 467
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 458 SELDQFPLGR 467
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 454 SELDQYPLGR 463
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 AELDQWPQER 10
+ELDQ+P R
Sbjct: 458 SELDQFPLGR 467
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LDQWPQER 10
+D W +ER
Sbjct: 70 IDNWTRER 77
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 3 LDQWPQER 10
+D W +ER
Sbjct: 70 IDNWTRER 77
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 AELDQWPQER 10
AELDQ+P R
Sbjct: 144 AELDQFPFGR 153
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 456 ADLDQFPLGR 465
>sp|NEP_INCGL|NUCLEAR export protein|Influenza C virus (strain C/Great
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 67 SSLDKWPE 74
>sp|NEP_INCHY|NUCLEAR export protein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 72 SSLDKWPE 79
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 72 SSLDKWPE 79
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 67 SSLDKWPE 74
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 67 SSLDKWPE 74
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 67 SSLDKWPE 74
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 ELDQWPQER 10
ELDQ+P R
Sbjct: 458 ELDQFPLGR 466
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ELDQW 6
ELDQW
Sbjct: 634 ELDQW 638
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ELDQW 6
ELDQW
Sbjct: 641 ELDQW 645
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 ELDQWPQER 10
ELDQ+P R
Sbjct: 457 ELDQFPLGR 465
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 AELDQWPQ 8
+ LD+WP+
Sbjct: 67 SSLDRWPE 74
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 454 ADLDQFPLGR 463
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 455 ADLDQFPLGR 464
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 AELDQWPQER 10
A+LDQ+P R
Sbjct: 463 ADLDQFPLGR 472
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 AELDQWPQER 10
++LDQ+P R
Sbjct: 487 SDLDQYPLGR 496
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 520 DLDQYPLGR 528
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 1 AELDQWPQER 10
++LDQ+P R
Sbjct: 456 SQLDQFPLGR 465
>sp|HBSAG_HBVA6|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 4 DQWPQ 8
D WPQ
Sbjct: 39 DHWPQ 43
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 1 AELDQWPQER 10
++LDQ+P R
Sbjct: 456 SQLDQFPLGR 465
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 6 WPQER 10
WP+ER
Sbjct: 641 WPRER 645
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 WPQER 10
WP+ER
Sbjct: 642 WPRER 646
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 469 DLDQYPLGR 477
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 469 DLDQYPLGR 477
>sp|HBSAG_HBVA9|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 4 DQWPQ 8
D WPQ
Sbjct: 50 DHWPQ 54
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 468 DLDQYPLGR 476
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AELDQWPQER 10
ELD+W + R
Sbjct: 11 GELDKWEKIR 20
>sp|HBSAG_HBVA8|LARGE envelope protein|Hepatitis B virus genotype A3
Query: 4 DQWPQ 8
D WPQ
Sbjct: 50 DHWPQ 54
>sp|HBSAG_HBVA5|LARGE envelope protein|Hepatitis B virus genotype A1
Query: 4 DQWPQ 8
D WPQ
Sbjct: 50 DHWPQ 54
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 469 DLDQYPLGR 477
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 464 DLDQYPLGR 472
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AELDQWPQER 10
ELD+W + R
Sbjct: 11 GELDKWEKIR 20
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 ELDQW 6
ELD+W
Sbjct: 662 ELDEW 666
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AELDQWPQER 10
ELD+W + R
Sbjct: 11 GELDKWEKIR 20
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 AELDQWPQER 10
ELD+W + R
Sbjct: 11 GELDKWEKIR 20
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 ELDQWPQER 10
+LDQ+P R
Sbjct: 464 DLDQYPLGR 472
73|Sequence|361|370|WPQERESDQH
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 2 PQERESD 8
PQERE+D
Sbjct: 186 PQEREND 192
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 PQERESD 8
PQERE+D
Sbjct: 470 PQEREND 476
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PQERESD 8
PQERE+D
Sbjct: 470 PQEREND 476
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 WPQERESDQH 10
WP+ +++++H
Sbjct: 1554 WPRVQDANEH 1563
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 WPQERESDQ 9
WP+ E DQ
Sbjct: 107 WPKYLEDDQ 115
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 1 WPQERESD 8
WP E+D
Sbjct: 354 WPNNTETD 361
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WPQERESD 8
WP E+D
Sbjct: 354 WPNNTETD 361
>sp|PHOSP_VSIVA|PHOSPHOPROTEIN stomatitis Indiana virus (strain
Query: 2 PQERESDQH 10
P E ESD+H
Sbjct: 110 PPELESDEH 118
>sp|C20L_VACCC|UNCHARACTERIZED protein C20L|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WPQERESDQH 10
W +++E QH
Sbjct: 56 WHEQKEEGQH 65
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WPQERESD 8
WP E+D
Sbjct: 354 WPNNTETD 361
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 WPQERESDQH 10
WP +ES++
Sbjct: 1551 WPALKESNEQ 1560
>sp|GP350_EBVB9|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WPQERESD 8
WP E+D
Sbjct: 354 WPNNTETD 361
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WPQERES 7
WP RE+
Sbjct: 2933 WPNAREA 2939
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 WPQERESD 8
W +ER+ D
Sbjct: 395 WAKERKDD 402
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 WPQERESD 8
W +ER+ D
Sbjct: 395 WAKERKED 402
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 PQERESDQH 10
P E E D H
Sbjct: 494 PTEEEIDMH 502
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 PQERESDQH 10
P E E D H
Sbjct: 494 PTEEEIDMH 502
74|Sequence|366|375|ESDQHVVPTA
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 2 SDQHVVPTA 10
S HVVPTA
Sbjct: 34 SPYHVVPTA 42
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 ESDQHVVP 8
ESD+ VVP
Sbjct: 1594 ESDEDVVP 1601
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 ESDQHVVP 8
ESD+ VVP
Sbjct: 1594 ESDEDVVP 1601
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 ESDQHVVP 8
ESD+ VVP
Sbjct: 1594 ESDEDVVP 1601
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 ESDQHVVP 8
+ D HVVP
Sbjct: 440 DEDNHVVP 447
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 ESDQHVVP 8
+ D HVVP
Sbjct: 440 DEDNHVVP 447
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 ESDQHVVPT 9
ESD+HV T
Sbjct: 64 ESDRHVDTT 72
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate
Query: 1 ESDQHVVPT 9
+SD H+ PT
Sbjct: 68 QSDLHIDPT 76
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 1 ESDQHV 6
ESD+H+
Sbjct: 130 ESDEHI 135
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 3 DQHVVPT 9
DQH PT
Sbjct: 266 DQHFNPT 272
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 HVVPTA 10
HVVPT
Sbjct: 1130 HVVPTG 1135
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 QHVVPT 9
+H+VPT
Sbjct: 110 EHLVPT 115
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 QHVVPT 9
+H+VPT
Sbjct: 110 EHLVPT 115
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 5 HVVPTA 10
HV+PT+
Sbjct: 1129 HVIPTS 1134
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 3 DQHVVPT 9
D H+ PT
Sbjct: 564 DLHIAPT 570
75|Sequence|371|380|VVPTAPDTEA
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 VVPTAPDTEA 10
V+PTA DTEA
Sbjct: 590 VLPTAADTEA 599
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 PTAPDT 8
P+APDT
Sbjct: 152 PSAPDT 157
>sp|NEC1_HHV8P|NUCLEAR egress protein 1|Human herpesvirus 8 type P
Query: 2 VPTAPDTEA 10
VPT PDT +
Sbjct: 259 VPTHPDTAS 267
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 PTAPDTE 9
PT PDT+
Sbjct: 592 PTGPDTQ 598
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 PTAPDTEA 10
PT PDT +
Sbjct: 122 PTQPDTSS 129
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 PTAPDTEA 10
PT PDT +
Sbjct: 122 PTQPDTSS 129
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 PTAPDTEA 10
PT PDT +
Sbjct: 122 PTQPDTSS 129
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 VVPTAPDTE 9
V+PT+P +
Sbjct: 78 VIPTSPSGQ 86
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 4 TAPDTE 9
TAPDTE
Sbjct: 438 TAPDTE 443
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 1 VVPTAPDTE 9
+VPT+P +
Sbjct: 179 IVPTSPTNQ 187
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 PTAPDTEA 10
PT PDT +
Sbjct: 122 PTQPDTSS 129
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 1 VVPTAPDTE 9
V P AP+ E
Sbjct: 435 VTPVAPNPE 443
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VVPTAPDTE 9
V P AP+ E
Sbjct: 435 VTPVAPNPE 443
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 2 VPTAPDTEA 10
VP +P TEA
Sbjct: 53 VPVSPLTEA 61
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 VPTAPDT 8
VP APDT
Sbjct: 454 VPPAPDT 460
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VVPTAPDTE 9
V+P PD E
Sbjct: 51 VLPPPPDAE 59
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VVPTAPDTE 9
V+P PD E
Sbjct: 51 VLPPPPDAE 59
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPTAPDTE 9
VP+ P+T+
Sbjct: 1480 VPSPPETQ 1487
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPTAPDTE 9
VP+ P+T+
Sbjct: 1480 VPSPPETQ 1487
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPTAPDTE 9
VP+ P+T+
Sbjct: 1480 VPSPPETQ 1487
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPTAPDTE 9
VP+ P+T+
Sbjct: 1480 VPSPPETQ 1487
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 VPTAPDTE 9
VP+ P+T+
Sbjct: 1480 VPSPPETQ 1487
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 1 VVPTAPDTEA 10
VVPTAP A
Sbjct: 38 VVPTAPKETA 47
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TAPDT 8
TAPDT
Sbjct: 7 TAPDT 11
76|Sequence|376|385|PDTEADNCIV
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 PDTEADNCIV 10
PD E C+V
Sbjct: 223 PDKEGRGCLV 232
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 PDTEADNCIV 10
PD NC++
Sbjct: 997 PDDRLKNCVI 1006
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 PDTEADNCIV 10
PD NC++
Sbjct: 997 PDDRLKNCVI 1006
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PDTEADNC 8
PD E D C
Sbjct: 227 PDEEPDRC 234
>sp|NEC1_HHV2H|NUCLEAR egress protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 TEADNCI 9
T ADNC+
Sbjct: 100 TVADNCL 106
>sp|NEC1_HHV11|NUCLEAR egress protein 1|Human herpesvirus 1 (strain 17)
Query: 3 TEADNCI 9
T ADNC+
Sbjct: 101 TVADNCL 107
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 PDTEADN 7
PDT AD+
Sbjct: 185 PDTAADS 191
>sp|PG060_VACCP|PROTEIN OPG060|Vaccinia virus (strain L-IVP) (VACV)
Query: 4 EADNCIV 10
+ DNCI+
Sbjct: 36 QKDNCIL 42
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 2 DTEADNCIV 10
DT+A C+V
Sbjct: 223 DTQAALCLV 231
77|Sequence|381|390|DNCIVHELTG
>sp|UL30_HCMVA|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DNCIVHELTG 10
D+C VH+L G
Sbjct: 28 DSCFVHDLRG 37
>sp|UL30_HCMVM|UNCHARACTERIZED protein UL30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DNCIVHELTG 10
D+C VH+L G
Sbjct: 28 DSCFVHDLRG 37
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHEL 8
DNC++H +
Sbjct: 162 DNCLLHPM 169
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 3 CIVHELT 9
C+VH LT
Sbjct: 557 CVVHSLT 563
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHEL 8
DNC++H +
Sbjct: 170 DNCLLHPI 177
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 IVHELTG 10
I HELTG
Sbjct: 622 IAHELTG 628
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 IVHELTG 10
I HELTG
Sbjct: 637 IAHELTG 643
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 DNCIVH 6
DNC++H
Sbjct: 881 DNCVIH 886
>sp|VP7_ROTJ1|OUTER capsid glycoprotein VP7|Rotavirus X (strain
Query: 1 DNCIVHELT 9
D CIV+E+T
Sbjct: 24 DLCIVYEMT 32
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 DNCIVH 6
D+CI+H
Sbjct: 195 DSCIIH 200
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 DNCIVH 6
D+CI+H
Sbjct: 195 DSCIIH 200
>sp|VP7_ROTB2|OUTER capsid glycoprotein VP7|Rotavirus X (isolate
Query: 1 DNCIVHELT 9
D CI++E+T
Sbjct: 24 DLCIIYEMT 32
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CIV LTG
Sbjct: 1042 CIVTSLTG 1049
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 CIVHELTG 10
CIV LTG
Sbjct: 1042 CIVTSLTG 1049
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 3 CIVHELTG 10
C++H+ TG
Sbjct: 299 CLLHDSTG 306
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 161 NNCLLHPMS 169
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 170 NNCLLHPMS 178
>sp|NEF_HV1VI|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 161 NNCLLHPMS 169
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 163 NNCLLHPMS 171
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 156 NNCLLHPMS 164
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 171 NNCLLHPMS 179
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 164 NNCLLHPMS 172
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 IVHELTG 10
+VH+LTG
Sbjct: 267 LVHKLTG 273
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 IVHELTG 10
+VH+LTG
Sbjct: 267 LVHKLTG 273
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 IVHELTG 10
+VH+LTG
Sbjct: 267 LVHKLTG 273
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 IVHELTG 10
+VH+LTG
Sbjct: 267 LVHKLTG 273
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 DNCIVH 6
D CI+H
Sbjct: 4669 DRCIIH 4674
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 CIVHELTG 10
CI+ LTG
Sbjct: 1042 CIITSLTG 1049
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHELT 9
+NC++H ++
Sbjct: 156 NNCLLHPIS 164
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 3 CIVHELTG 10
C+ H L+G
Sbjct: 94 CVKHHLSG 101
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 NCIVH 6
NC+VH
Sbjct: 192 NCLVH 196
>sp|NEF_HV2BE|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 NCIVH 6
NC+VH
Sbjct: 192 NCLVH 196
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DNCIVH 6
D CI+H
Sbjct: 4707 DRCIIH 4712
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DNCIVH 6
D CI+H
Sbjct: 4727 DRCIIH 4732
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DNCIVH 6
D CI+H
Sbjct: 4757 DRCIIH 4762
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 NCIVHELTG 10
+C+ H L G
Sbjct: 666 SCVFHRLRG 674
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 DNC-IVHELTG 10
D C I HE+TG
Sbjct: 37 DPCSIQHEVTG 47
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 CIVHELT 9
C VH LT
Sbjct: 1136 CAVHSLT 1142
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 CIVHELT 9
C VH LT
Sbjct: 1136 CAVHSLT 1142
>sp|TRM3_HHV2H|TRIPARTITE terminase subunit 3|Human herpesvirus 2 (strain HG52)
Query: 3 CIVHEL 8
C+VH L
Sbjct: 557 CVVHSL 562
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 DNCIVHELT 9
+N VHE+T
Sbjct: 646 ENNTVHEIT 654
>sp|VE6_HPV48|PROTEIN E6|Human papillomavirus type 48
Query: 2 NCIVHE 7
NCI HE
Sbjct: 135 NCISHE 140
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 3 CIVHE 7
CI+HE
Sbjct: 522 CILHE 526
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DNCIVH 6
D CI+H
Sbjct: 4696 DRCILH 4701
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 1 DNCIVHELTG 10
D+ +H L+G
Sbjct: 88 DDLTIHRLSG 97
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVHEL 8
+NC++H +
Sbjct: 158 NNCLLHPI 165
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DNCIVH 6
D CI+H
Sbjct: 4673 DRCILH 4678
>sp|SCAF_HHV7J|CAPSID scaffolding protein|Human herpesvirus 7 (strain JI)
Query: 1 DNCIVH 6
D+C VH
Sbjct: 256 DDCAVH 261
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVH 6
+NC++H
Sbjct: 159 NNCLLH 164
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVH 6
+NC++H
Sbjct: 162 NNCLLH 167
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 DNCIVH 6
+NC++H
Sbjct: 161 NNCLLH 166
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 DNCIVHE 7
D C+VH+
Sbjct: 560 DPCLVHD 566
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DNCIVHEL 8
D C++H +
Sbjct: 584 DECLLHAM 591
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 DNCIVHEL 8
D C++H +
Sbjct: 584 DECLLHAM 591
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 DNCIVHEL 8
D C++H +
Sbjct: 584 DECLLHAM 591
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 NCIVHELTG 10
NC +H +G
Sbjct: 1129 NCPIHSPSG 1137
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 NCIVHELTG 10
NC +H +G
Sbjct: 1129 NCPIHSPSG 1137
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DNCIVH 6
DNC +H
Sbjct: 744 DNCPIH 749
>sp|NEF_HV2KR|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 DNCIVH 6
D+C++H
Sbjct: 188 DHCLLH 193
78|Sequence|386|395|HELTGQSSVL
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 ELTGQSSV 9
+LTGQSS+
Sbjct: 1362 DLTGQSSI 1369
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 HELTGQSSVL 10
++LTGQ ++L
Sbjct: 1687 YDLTGQKNLL 1696
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 HELTGQSSV 9
H LTGQ ++
Sbjct: 377 HTLTGQHTL 385
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 1 HELTGQSSV 9
H L+GQ S+
Sbjct: 366 HTLSGQHSL 374
79|Sequence|391|400|QSSVLRRPVR
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 SVLRRPVR 10
+V+RRP+R
Sbjct: 814 TVVRRPLR 821
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 SVLRRPVR 10
+V+RRP+R
Sbjct: 814 TVVRRPLR 821
80|Sequence|396|405|RRPVRPKRAE
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RRPVRPKRAE 10
R P RP+R E
Sbjct: 725 REPDRPERIE 734
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 2 RPVRPKR 8
RP RPKR
Sbjct: 644 RPKRPKR 650
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RRPVRPK 7
+RP+RP+
Sbjct: 2077 KRPLRPR 2083
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RRPVRPKRA 9
R PVRP +
Sbjct: 252 RHPVRPSSS 260
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 RPVRPKRAE 10
RP RP ++E
Sbjct: 1647 RPTRPDKSE 1655
>sp|PG062_MONPV|PHOSPHOPROTEIN OPG062|Monkeypox virus (MPXV)
Query: 1 RRPVRPKRAE 10
RRP P R E
Sbjct: 58 RRPSSPSRCE 67
>sp|PG062_VACCT|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Tian Tan)
Query: 1 RRPVRPKRAE 10
RRP P R E
Sbjct: 58 RRPSSPSRCE 67
>sp|PG062_VACCC|PHOSPHOPROTEIN OPG062|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRPVRPKRAE 10
RRP P R E
Sbjct: 58 RRPSSPSRCE 67
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 2 RPVRPKRAE 10
RP P RAE
Sbjct: 26 RPAVPGRAE 34
>sp|PG062_VARV|PHOSPHOPROTEIN OPG062|Variola virus
Query: 1 RRPVRPKRAE 10
RRP P R E
Sbjct: 58 RRPSSPSRCE 67
>sp|PG062_VAR67|PHOSPHOPROTEIN OPG062|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RRPVRPKRAE 10
RRP P R E
Sbjct: 58 RRPSSPSRCE 67
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 RRPVRPKRAE 10
+RP PK +E
Sbjct: 116 QRPQPPKESE 125
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 RPVRPK 7
RP RPK
Sbjct: 2281 RPPRPK 2286
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 RPVRPKRAE 10
+PV PKR +
Sbjct: 494 KPVTPKRKK 502
81|Sequence|401|410|PKRAEPREAS
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 PKRAEPR 7
PK EPR
Sbjct: 497 PKSTEPR 503
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 PKRAEP 6
PK AEP
Sbjct: 277 PKNAEP 282
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 PKRAEPRE 8
PKR+ P E
Sbjct: 118 PKRSAPEE 125
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 PKRAEPRE 8
PKR+ P E
Sbjct: 118 PKRSAPEE 125
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 PKRAEPRE 8
PKR+ P E
Sbjct: 118 PKRSAPEE 125
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 PKRAEP 6
PKR+EP
Sbjct: 6 PKRSEP 11
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 PKRAEPRE 8
P R PRE
Sbjct: 1649 PSRVSPRE 1656
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 PKRAEPRE 8
P R PRE
Sbjct: 1649 PSRVSPRE 1656
82|Sequence|406|415|PREASPLHSL
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 3 EASPLHSL 10
E SPLHSL
Sbjct: 159 EISPLHSL 166
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 5 SPLHSL 10
SPLHSL
Sbjct: 107 SPLHSL 112
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 5 SPLHSL 10
SPLHSL
Sbjct: 107 SPLHSL 112
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 5 SPLHSL 10
SPLHSL
Sbjct: 107 SPLHSL 112
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 5 SPLHSL 10
SPLHSL
Sbjct: 107 SPLHSL 112
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 5 SPLHSL 10
SPLHSL
Sbjct: 107 SPLHSL 112
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 SPLHSL 10
SPLHSL
Sbjct: 107 SPLHSL 112
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 PREASPLHSL 10
PRE LHSL
Sbjct: 878 PREIRVLHSL 887
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 PREASPLHSL 10
PRE LHSL
Sbjct: 885 PREIRVLHSL 894
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PREASP 6
PREA P
Sbjct: 1502 PREAKP 1507
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 ASPLHSL 10
A P+HSL
Sbjct: 1156 ADPIHSL 1162
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 ASPLHSL 10
A P+HSL
Sbjct: 1156 ADPIHSL 1162
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 REASPLHS 9
R+ASP HS
Sbjct: 349 RDASPQHS 356
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 2 REASPLHS 9
R+ASP HS
Sbjct: 347 RDASPQHS 354
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 2 REASPLHSL 10
R+ +PLH+L
Sbjct: 319 RKLTPLHNL 327
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 EASPLHSL 10
EA+P+H++
Sbjct: 2142 EAAPIHAI 2149
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 1 PREASPLHSL 10
PR SP H L
Sbjct: 230 PRVTSPTHPL 239
>sp|IE247_HCMVT|45 kDa immediate-early protein 2|Human cytomegalovirus (strain
Query: 1 PREASPLHSL 10
PR SP H L
Sbjct: 61 PRVTSPTHPL 70
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 1 PREASPLHSL 10
PR SP H L
Sbjct: 230 PRVTSPTHPL 239
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 1 PREASPLHSL 10
PR SP H L
Sbjct: 230 PRVTSPTHPL 239
>sp|GK_HHV1R|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R15)
Query: 4 ASPLH 8
ASPLH
Sbjct: 31 ASPLH 35
>sp|GK_HHV1M|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain MP)
Query: 4 ASPLH 8
ASPLH
Sbjct: 31 ASPLH 35
>sp|GK_HHV19|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain R19)
Query: 4 ASPLH 8
ASPLH
Sbjct: 31 ASPLH 35
>sp|GK_HHV11|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain 17)
Query: 4 ASPLH 8
ASPLH
Sbjct: 31 ASPLH 35
>sp|GK_HHV1K|ENVELOPE glycoprotein K|Human herpesvirus 1 (strain KOS)
Query: 4 ASPLH 8
ASPLH
Sbjct: 31 ASPLH 35
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PREASPLHSL 10
PR PLH L
Sbjct: 1842 PRARRPLHPL 1851
83|Sequence|411|420|PLHSLGHLIM
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 PLHSLG 6
PLHSLG
Sbjct: 108 PLHSLG 113
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 PLHSLG 6
PLHSLG
Sbjct: 108 PLHSLG 113
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 PLHSLG 6
PLHSLG
Sbjct: 108 PLHSLG 113
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PLHSLG 6
PLHSLG
Sbjct: 108 PLHSLG 113
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PLHSLG 6
PLHSLG
Sbjct: 108 PLHSLG 113
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PLHSLG 6
PLHSLG
Sbjct: 108 PLHSLG 113
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 PLHSLGHLI 9
P+H LG++I
Sbjct: 387 PMHQLGNVI 395
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PLHSLGH 7
PLH+L H
Sbjct: 802 PLHALNH 808
>sp|EBNA3_EBVA8|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PLHSLGH 7
PLH L H
Sbjct: 792 PLHDLNH 798
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 1 PLHSLGHL 8
P H+ GHL
Sbjct: 738 PPHAAGHL 745
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 1 PLHSLGHL 8
P H+ GHL
Sbjct: 738 PPHAAGHL 745
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 3 HSLGH-LIM 10
H LGH LIM
Sbjct: 472 HDLGHYLIM 480
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 2 LHSLGH 7
+H+LGH
Sbjct: 716 VHALGH 721
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 2 LHSLGH 7
+H+LGH
Sbjct: 716 VHALGH 721
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 2 LHSLGH 7
+H+LGH
Sbjct: 715 VHALGH 720
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 2 LHSLGH 7
+H+LGH
Sbjct: 716 VHALGH 721
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 PLHSLGHL 8
P HS GH+
Sbjct: 683 PGHSAGHV 690
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 PLHSLGH 7
PL+ +GH
Sbjct: 399 PLYMIGH 405
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 HSLGHLI 9
HSL H +
Sbjct: 2516 HSLSHFV 2522
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 HSLGHLI 9
HSL H +
Sbjct: 2516 HSLSHFV 2522
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3001 LHKLGYIL 3008
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3001 LHKLGYIL 3008
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3001 LHKLGYIL 3008
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3001 LHKLGYIL 3008
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3001 LHKLGYIL 3008
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3000 LHKLGYIL 3007
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3004 LHKLGYIL 3011
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3003 LHKLGYIL 3010
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 3004 LHKLGYIL 3011
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 2999 LHRLGYIL 3006
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 2999 LHRLGYIL 3006
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 2999 LHRLGYIL 3006
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 2999 LHRLGYIL 3006
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 LHSLGHLI 9
LH LG+++
Sbjct: 2999 LHRLGYIL 3006
84|Sequence|416|425|GHLIMDQSYV
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 GHLIMDQSYV 10
H+I+DQS +
Sbjct: 1064 AHIIIDQSSI 1073
>sp|PAX_I30A0|PROTEIN PA-X|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GHLIMDQS 8
GH+ MD S
Sbjct: 230 GHMWMDSS 237
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 GHLIMDQ 7
GH+IM++
Sbjct: 6690 GHIIMEE 6696
>sp|PG181_VARV|PROTEIN OPG181|Variola virus
Query: 1 GHLIMDQSYV 10
G+LI +Q Y+
Sbjct: 309 GNLIRNQDYI 318
>sp|PG181_VAR67|PROTEIN OPG181|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GHLIMDQSYV 10
G+LI +Q Y+
Sbjct: 309 GNLIRNQDYI 318
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HLIMDQ 7
HL++DQ
Sbjct: 24 HLVLDQ 29
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HLIMDQ 7
HL++DQ
Sbjct: 24 HLVLDQ 29
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 HLIMDQ 7
HL+MD+
Sbjct: 2066 HLVMDE 2071
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 GHLIMDQSY 9
GH DQ+Y
Sbjct: 565 GHYGADQTY 573
>sp|C_PI3H4|PROTEIN C|Human parainfluenza 3 virus (strain
Query: 2 HLIMDQ 7
HLI DQ
Sbjct: 194 HLIQDQ 199
>sp|U24_HHV6U|U24 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 HLIMDQSYV 10
H+I D S+V
Sbjct: 27 HVINDTSFV 35
85|Sequence|421|430|DQSYVCALIA
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SYVCALIA 10
+YVC+LIA
Sbjct: 3377 TYVCSLIA 3384
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 SYVCALIA 10
+YVC+LIA
Sbjct: 3377 TYVCSLIA 3384
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DQSYVC 6
DQ+YVC
Sbjct: 367 DQNYVC 372
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DQSYVC 6
DQ+YVC
Sbjct: 367 DQNYVC 372
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DQSYVC 6
DQ+YVC
Sbjct: 367 DQNYVC 372
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DQSYVC 6
DQ+YVC
Sbjct: 367 DQNYVC 372
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 DQSYVC 6
DQ+YVC
Sbjct: 367 DQNYVC 372
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 DQSYVCALIA 10
D SYVC +++
Sbjct: 422 DMSYVCPILS 431
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DQSYVC 6
DQ Y+C
Sbjct: 366 DQQYIC 371
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DQSYVC 6
DQ Y+C
Sbjct: 366 DQQYIC 371
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DQSYVC 6
DQ Y+C
Sbjct: 366 DQQYIC 371
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DQSYVC 6
DQ Y+C
Sbjct: 366 DQQYIC 371
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 DQSYVC 6
DQ Y+C
Sbjct: 366 DQQYIC 371
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 1 DQSYVCA 7
D SYVC+
Sbjct: 313 DSSYVCS 319
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 309 DSSYVC 314
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 DQSYVC 6
D SYVC
Sbjct: 381 DSSYVC 386
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YVCALI 9
YVCAL+
Sbjct: 714 YVCALL 719
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 YVCALI 9
YVCAL+
Sbjct: 714 YVCALL 719
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 YVCALI 9
YVCAL+
Sbjct: 714 YVCALL 719
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 QSYVCALIA 10
Q +CAL+A
Sbjct: 1385 QEALCALVA 1393
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 QSYVCALIA 10
Q +CAL+A
Sbjct: 1385 QEALCALVA 1393
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DQSYVCALIA 10
++SY+C + A
Sbjct: 295 EESYICVICA 304
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 DQSYVCALIA 10
++SY+C + A
Sbjct: 295 EESYICVICA 304
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 3 SYVCALI 9
SY+C LI
Sbjct: 700 SYLCHLI 706
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 SYVCALI 9
SY+C LI
Sbjct: 695 SYLCHLI 701
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 4 YVCAL 8
YVCAL
Sbjct: 138 YVCAL 142
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 SYVCALI 9
SY+C LI
Sbjct: 699 SYLCHLI 705
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 3 SYVCAL 8
+YVCA+
Sbjct: 459 TYVCAI 464
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 3 SYVCAL 8
+YVCA+
Sbjct: 459 TYVCAI 464
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 3 SYVCAL 8
+YVCA+
Sbjct: 461 TYVCAI 466
86|Sequence|426|435|CALIAMMVWS
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CALIAMM 7
C L+AM+
Sbjct: 302 CTLVAML 308
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 1 CALIAMM 7
C L+AM+
Sbjct: 302 CTLVAML 308
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 1 CALIAMM 7
C L+AM+
Sbjct: 302 CTLVAML 308
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 CALIAMMVW 9
C+LI VW
Sbjct: 924 CSLIFRNVW 932
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 1 CALIAMMVW 9
C+LI VW
Sbjct: 924 CSLIFRNVW 932
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CALIAMMVW 9
CA +A W
Sbjct: 387 CAYVAFRAW 395
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 1 CALIAMMVW 9
C+LI +W
Sbjct: 924 CSLIFRNIW 932
87|Sequence|431|440|MMVWSITYHS
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 4 WSITYHS 10
W +T+HS
Sbjct: 36 WRVTFHS 42
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 3 VWSITYHS 10
VW I +H+
Sbjct: 395 VWKIEFHN 402
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 WSITY 8
WSITY
Sbjct: 5883 WSITY 5887
>sp|PG110_VAR67|LATE transcription elongation factor OPG110|Variola virus (isolate
Query: 2 MVWSIT 7
M WSIT
Sbjct: 1 MAWSIT 6
>sp|PG110_VACCC|LATE transcription elongation factor OPG110|Vaccinia virus (strain
Query: 2 MVWSIT 7
M WSIT
Sbjct: 1 MAWSIT 6
>sp|PG110_MONPV|LATE transcription elongation factor OPG110|Monkeypox virus (MPXV)
Query: 2 MVWSIT 7
M WSIT
Sbjct: 1 MAWSIT 6
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 VWSITY 8
VW ITY
Sbjct: 685 VWKITY 690
>sp|VPU_HV1VI|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 MMVWSITY 8
++VW+I Y
Sbjct: 20 IVVWTIVY 27
>sp|VPU_HV193|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 MMVWSITY 8
++VW+I Y
Sbjct: 20 IVVWTIAY 27
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 VWSITY 8
VW ITY
Sbjct: 686 VWKITY 691
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 VWSITY 8
VW ITY
Sbjct: 686 VWKITY 691
>sp|VPU_HV1ET|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 MMVWSITY 8
++VW+I Y
Sbjct: 25 IVVWTIAY 32
>sp|VL2_HPV10|MINOR capsid protein L2|Human papillomavirus type 10
Query: 3 VWSITYH 9
+W +T+H
Sbjct: 443 LWPVTFH 449
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 WSITYH 9
WS+ YH
Sbjct: 4655 WSMPYH 4660
>sp|VPU_HV190|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 MMVWSITY 8
++VW+I Y
Sbjct: 19 VIVWTIVY 26
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 VWSITYHS 10
VW ITY
Sbjct: 685 VWKITYKD 692
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 WSITYH 9
WS YH
Sbjct: 4328 WSFDYH 4333
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 VWSITY 8
+W+ITY
Sbjct: 683 IWNITY 688
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 4 WSITYH 9
WS YH
Sbjct: 440 WSRAYH 445
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 WSITYH 9
W++ YH
Sbjct: 399 WAVDYH 404
88|Sequence|436|445|ITYHSWLTFV
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YHSWL 7
YH+WL
Sbjct: 983 YHNWL 987
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YHSWL 7
YH+WL
Sbjct: 983 YHNWL 987
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ITYHSW 6
IT HSW
Sbjct: 6946 ITEHSW 6951
Query: 2 TYHSWLTF 9
TY+ W TF
Sbjct: 6418 TYNLWNTF 6425
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 3 YHSWLTF 9
Y+ W+TF
Sbjct: 2106 YNRWITF 2112
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 ITYHSW 6
IT HSW
Sbjct: 6969 ITEHSW 6974
Query: 2 TYHSWLTF 9
TY+ W TF
Sbjct: 6441 TYNLWNTF 6448
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 4 HSWLTF 9
H W+TF
Sbjct: 80 HRWITF 85
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ITYHSWL 7
+T H+WL
Sbjct: 412 LTAHTWL 418
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 ITYHSW 6
IT HSW
Sbjct: 6946 ITEHSW 6951
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWI 667
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 ITYHSW 6
IT+H W
Sbjct: 600 ITFHRW 605
>sp|SEMA_VACCC|SEMAPHORIN-LIKE protein A39|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ITYHSWLTFV 10
++ H W TF+
Sbjct: 205 LSSHRWSTFL 214
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 ITYHSWL 7
I YH W+
Sbjct: 157 IDYHVWI 163
>sp|POXIN_VACCC|POXIN virus (strain Copenhagen) (VACV)
Query: 1 ITYHSWL 7
I YH W+
Sbjct: 157 IDYHVWI 163
>sp|POXIN_VACCA|POXIN virus (strain Ankara) (VACV)
Query: 1 ITYHSWL 7
I YH W+
Sbjct: 157 IDYHVWI 163
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 1 ITYHSWL 7
I YH W+
Sbjct: 155 IDYHVWI 161
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 1 ITYHSWL 7
I YH W+
Sbjct: 155 IDYHVWI 161
>sp|NCAP_CVHOC|NUCLEOPROTEIN coronavirus OC43 (HCoV-OC43)
Query: 1 ITYHSWLT 8
+ Y+SW +
Sbjct: 60 VPYYSWFS 67
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I82A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 66 TTHSWV 71
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 TYHSWL 7
T HSW+
Sbjct: 662 TTHSWV 667
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 TYHSWLTFV 10
TY WL V
Sbjct: 267 TYRGWLATV 275
Query: 2 TYHSWL 7
TY SW
Sbjct: 1694 TYESWF 1699
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 3 YHSWLTFV 10
+ SW TF+
Sbjct: 28 FFSWSTFM 35
89|Sequence|441|450|WLTFVLLLWA
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WLTFVLLLW 9
W+ F+ +LW
Sbjct: 123 WIYFLEILW 131
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 WLTFVLLLW 9
W+ F+ +LW
Sbjct: 123 WIYFLEILW 131
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 WLTFVLLLW 9
WL L+W
Sbjct: 6 WLVMASLVW 14
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 WLTFVLLLW 9
WL L+W
Sbjct: 6 WLVMASLVW 14
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 WLTFVLLLW 9
WL L+W
Sbjct: 6 WLVMASLVW 14
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 WLTFVLLLWA 10
W+ F LLL A
Sbjct: 2991 WIWFCLLLLA 3000
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 WLTFVLLL 8
W T +LLL
Sbjct: 492 WATMLLLL 499
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 WLTFVLLL 8
W T +LLL
Sbjct: 492 WATMLLLL 499
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 WLTFVLLL 8
W T +LLL
Sbjct: 492 WATMLLLL 499
90|Sequence|446|455|LLLWACLIWT
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 LLWACL 7
LLWAC+
Sbjct: 114 LLWACV 119
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 LLWACL 7
LLWAC+
Sbjct: 113 LLWACV 118
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 1 LLLWACLI 8
+LLW CL+
Sbjct: 17 ILLWCCLL 24
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 LLWACL 7
LLWAC+
Sbjct: 207 LLWACV 212
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 LLWAC 6
LLWAC
Sbjct: 1007 LLWAC 1011
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 LLWACL 7
L+WAC+
Sbjct: 98 LVWACI 103
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 2 LLWACL 7
L+WAC+
Sbjct: 95 LVWACI 100
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 2 LLWACL 7
L+WAC+
Sbjct: 95 LVWACI 100
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 WACLIW 9
WA L+W
Sbjct: 890 WANLVW 895
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 4 WACLIW 9
WA L+W
Sbjct: 890 WANLVW 895
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 4 WACLIW 9
WA L+W
Sbjct: 890 WANLVW 895
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 4 WACLIW 9
WA L+W
Sbjct: 890 WANLVW 895
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 4 WACLIW 9
WA L+W
Sbjct: 890 WANLVW 895
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 LLWACL 7
L+WAC+
Sbjct: 98 LVWACV 103
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 2 LLWACL 7
L+WAC+
Sbjct: 96 LVWACV 101
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 LLWACL 7
L+WAC+
Sbjct: 128 LVWACV 133
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 2 LLWACL 7
L+WAC+
Sbjct: 97 LVWACV 102
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 LLWACL 7
L+WAC+
Sbjct: 125 LVWACV 130
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 2 LLWACL 7
L+WAC+
Sbjct: 132 LVWACV 137
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 LLWACL 7
L+WAC+
Sbjct: 96 LVWACV 101
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 2 LLWACL 7
L+WAC+
Sbjct: 125 LVWACV 130
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 LLWACL 7
L+WAC+
Sbjct: 96 LVWACV 101
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 LLWACL 7
L+WAC+
Sbjct: 98 LVWACV 103
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 LLWACL 7
L+WAC+
Sbjct: 99 LVWACV 104
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 2 LLWACL 7
L+WAC+
Sbjct: 99 LVWACV 104
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 2 LLWACL 7
L+WAC+
Sbjct: 105 LVWACV 110
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 2 LLWACL 7
L+WAC+
Sbjct: 97 LVWACV 102
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 LLWACL 7
L+WAC+
Sbjct: 98 LVWACV 103
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 2 LLWACL 7
L+WAC+
Sbjct: 99 LVWACV 104
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 LLWACL 7
L+WAC+
Sbjct: 96 LVWACV 101
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 321 MLRACQTWT 329
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 321 MLRACQTWT 329
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 321 MLRACQTWT 329
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 2 LLWAC 6
L+WAC
Sbjct: 95 LVWAC 99
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 2 LLWAC 6
L+WAC
Sbjct: 95 LVWAC 99
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 2 LLWAC 6
L+WAC
Sbjct: 95 LVWAC 99
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 LLWAC 6
L+WAC
Sbjct: 127 LVWAC 131
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 2 LLWAC 6
L+WAC
Sbjct: 101 LVWAC 105
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 2 LLWAC 6
L+WAC
Sbjct: 98 LVWAC 102
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 2 LLWAC 6
L+WAC
Sbjct: 123 LVWAC 127
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 LLWAC 6
L+WAC
Sbjct: 98 LVWAC 102
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 LLWAC 6
L+WAC
Sbjct: 98 LVWAC 102
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 LLWAC 6
L+WAC
Sbjct: 159 LVWAC 163
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 2 LLWAC 6
L+WAC
Sbjct: 95 LVWAC 99
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 LLWAC 6
L+WAC
Sbjct: 95 LVWAC 99
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 LLWAC 6
L+WAC
Sbjct: 126 LVWAC 130
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 2 LLWAC 6
L+WAC
Sbjct: 99 LVWAC 103
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 LLWAC 6
L+WAC
Sbjct: 126 LVWAC 130
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLLWACLI 8
L+ WAC +
Sbjct: 212 LIYWACTL 219
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLLWACLI 8
L+ WAC +
Sbjct: 212 LIYWACTL 219
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQTWT 336
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 321 MLRACQTWT 329
>sp|GAG_HTL1A|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQTWT 336
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LWACLIW 9
LW CL++
Sbjct: 3124 LWFCLLY 3130
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LLWACLI 8
++W CLI
Sbjct: 1610 MMWKCLI 1616
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 LLLWACLIWT 10
+LL CL WT
Sbjct: 841 ILLSRCLWWT 850
Query: 2 LLWACLI 8
++W CLI
Sbjct: 1610 VMWKCLI 1616
>sp|GAG_HTL1M|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQTWT 336
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 LLWACL 7
++WAC+
Sbjct: 98 MVWACV 103
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 LLWACL 7
++WAC+
Sbjct: 97 MVWACV 102
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 2 LLWACL 7
++WAC+
Sbjct: 97 MVWACV 102
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LWACLIW 9
LW CL++
Sbjct: 3124 LWFCLLY 3130
>sp|PRO_HTL1L|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQAWT 336
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQAWT 336
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 321 MLRACQTWT 329
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 321 MLRACQTWT 329
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQTWT 336
>sp|HEMA_I82A4|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 LLLWAC 6
++WAC
Sbjct: 534 FIMWAC 539
>sp|HEMA_I75A2|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 LLLWAC 6
++WAC
Sbjct: 534 FIMWAC 539
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 1 LLLWAC 6
++WAC
Sbjct: 534 FIMWAC 539
>sp|HEMA_I77A4|HEMAGGLUTININ A virus (strain A/Swine/Colorado/1/1977
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I76A6|HEMAGGLUTININ A virus (strain A/Memphis/110/1976
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I75A3|HEMAGGLUTININ A virus (strain A/Victoria/3/1975
Query: 1 LLLWAC 6
++WAC
Sbjct: 551 FIMWAC 556
>sp|HEMA_I75A0|HEMAGGLUTININ A virus (strain A/Beijing/39/1975
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I78A8|HEMAGGLUTININ A virus (strain A/Memphis/18/1978
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I78A7|HEMAGGLUTININ A virus (strain A/Memphis/2/1978
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 LLWACLI 8
++W CLI
Sbjct: 1610 VMWKCLI 1616
Query: 4 WACLIWT 10
WAC I T
Sbjct: 1987 WACTILT 1993
>sp|HEMA_I78A9|HEMAGGLUTININ A virus (strain A/Swine/Hong
Query: 1 LLLWAC 6
++WAC
Sbjct: 534 FIMWAC 539
>sp|GAG_HTL1C|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQAWT 336
>sp|GAG_HTL1L|GAG polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQAWT 336
>sp|HEMA_I84A5|HEMAGGLUTININ A virus (strain A/Swine/Ukkel/1/1984
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I77A8|HEMAGGLUTININ A virus (strain A/England/321/1977
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I73A5|HEMAGGLUTININ A virus (strain A/Port
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I78A4|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I72A4|HEMAGGLUTININ A virus (strain A/Memphis/101/1972
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I72A3|HEMAGGLUTININ A virus (strain A/Memphis/102/1972
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I72A2|HEMAGGLUTININ A virus (strain A/Udorn/307/1972
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I68A6|HEMAGGLUTININ A virus (strain A/Northern
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 2 LLWACLI 8
L+W CL+
Sbjct: 637 LVWMCLL 643
>sp|HEMA_I71A1|HEMAGGLUTININ A virus (strain A/Memphis/1/1971
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I68A4|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|HEMA_I68A0|HEMAGGLUTININ A virus (strain A/Aichi/2/1968
Query: 1 LLLWAC 6
++WAC
Sbjct: 550 FIMWAC 555
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 2 LLWAC 6
++WAC
Sbjct: 98 MVWAC 102
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 2 LLWAC 6
++WAC
Sbjct: 100 MVWAC 104
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LLLWACL 7
LLL+ CL
Sbjct: 3766 LLLYTCL 3772
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 LWACLI 8
+W CLI
Sbjct: 1608 MWKCLI 1613
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQAWT 336
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 2 LLWACLIWT 10
+L AC WT
Sbjct: 328 MLRACQAWT 336
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1615 MWKCLI 1620
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 LWACLI 8
+W CLI
Sbjct: 1609 MWKCLI 1614
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 LLLWAC 6
++WAC
Sbjct: 549 FIMWAC 554
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LLLWACL 7
LLL+ CL
Sbjct: 3766 LLLYTCL 3772
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 LWACLI 8
+W CLI
Sbjct: 1605 MWKCLI 1610
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 LLLWACL 7
L LW CL
Sbjct: 1346 LALWECL 1352
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 6 CLIW 9
CL+W
Sbjct: 755 CLVW 758
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 LWACLI 8
+W CLI
Sbjct: 1612 MWKCLI 1617
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLLWACLIW 9
LLL A IW
Sbjct: 396 LLLTALAIW 404
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 LWACLI 8
+W CLI
Sbjct: 1607 MWKCLI 1612
91|Sequence|451|460|CLIWTVRSRH
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 CLIWTVRSR 9
C +W VR+R
Sbjct: 13 CFLWHVRNR 21
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LIWTVRSR 9
LIWT R+R
Sbjct: 194 LIWTYRTR 201
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LIWTVRSR 9
LIWT R+R
Sbjct: 194 LIWTYRTR 201
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LIWTVRSR 9
LIWT R+R
Sbjct: 194 LIWTYRTR 201
>sp|NS1_I47A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I35A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Phila/1935
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 9 CFLWHVRKR 17
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I36A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Henry/1936
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I34A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Puerto
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 10 CFLWHVRKR 18
>sp|NS1_I06A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I40A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hickox/1940
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I54A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/1/1954
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I000X|NON-STRUCTURAL protein 1|Influenza A virus (strain A/X-31
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I33A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I43A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I45A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 13 CFLWHVRKR 21
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 1 CLIWTVRSR 9
C +W +R R
Sbjct: 13 CFLWHIRKR 21
>sp|NS1_I67A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 CLIWTVRSR 9
C +W +R R
Sbjct: 13 CFLWHIRKR 21
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 IWTVRSR 9
IWT RSR
Sbjct: 28 IWTCRSR 34
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 CLIWTVRSR 9
C +W +R R
Sbjct: 13 CFLWHIRKR 21
>sp|NS1_I82A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 1 CLIWTVRSR 9
C +W VR R
Sbjct: 1 CFLWHVRKR 9
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 WTVRSRH 10
WT RS+H
Sbjct: 813 WTPRSQH 819
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 WTVRSRH 10
WT RS+H
Sbjct: 796 WTPRSQH 802
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 IWTVRSRH 10
+W RS+H
Sbjct: 359 LWKARSKH 366
>sp|NS1_I77A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I76A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/110/1976
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I75A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/39/1975
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I73A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Port
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I72A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/101/1972
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I72A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/102/1972
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I60A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Ann
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I57A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/RI/5-/1957
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I78A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/18/1978
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I78A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/2/1978
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I80A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/4/1980
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I96A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I96A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I77A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Alaska/6/1977
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I72A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Udorn/307/1972
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I00A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/New
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CLIWTVRSR 9
CL W V+ R
Sbjct: 774 CLAWHVKGR 782
>sp|NS1_I83A8|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I80AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/India/6263/1980
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I83A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chile/1/1983
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I71A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Memphis/1/1971
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I07A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 IWTVRSRH 10
++TV SRH
Sbjct: 393 VYTVSSRH 400
>sp|NS1_I68A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Aichi/2/1968
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I57A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I57A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I57A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I68A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I70A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Qu/7/1970
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I67A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I57A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Singapore/1/1957
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I54A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I51A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I77AB|NON-STRUCTURAL protein 1|Influenza A virus (strain A/USSR/90/1977
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I77AA|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brazil/11/1978
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I69A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/England/878/1969
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I50A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Fort
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I57A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Japan/305/1957
Query: 1 CLIWTVRSR 9
C +W VR +
Sbjct: 13 CFLWHVRKQ 21
>sp|NS1_I89A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Beijing/352/1989
Query: 1 CLIWTVRSR 9
C +W +R +
Sbjct: 13 CFLWHIRKQ 21
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 LIWTVRSRH 10
LIW + RH
Sbjct: 1166 LIWPIYCRH 1174
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 CLIWTVRSR 9
C++W V+ R
Sbjct: 773 CIVWHVKGR 781
>sp|CAPSD_PAVHV|MINOR capsid protein VP1|Human parvovirus B19 (strain HV)
Query: 3 IWTVRSR 9
+WT +SR
Sbjct: 771 LWTAKSR 777
>sp|CAPSD_PAVHU|MINOR capsid protein VP1|Human parvovirus B19 (isolate AU)
Query: 3 IWTVRSR 9
+WT +SR
Sbjct: 771 LWTAKSR 777
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CLIWTV 6
CL+W +
Sbjct: 755 CLVWNI 760
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 CLIWTVRSR 9
C +W V+ R
Sbjct: 777 CCVWYVKGR 785
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 1 CLIWTV 6
CL+W V
Sbjct: 171 CLLWLV 176
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CLIWTV 6
CL+W V
Sbjct: 171 CLLWLV 176
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 1 CLIWTV 6
CL+W V
Sbjct: 171 CLLWLV 176
>sp|GAG_HV2RO|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|GAG_HV2CA|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|GAG_HV2NZ|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 CLIWTVRS 8
C+IW + +
Sbjct: 83 CVIWCIHA 90
>sp|UL49_HHV8P|PROTEIN ORF66|Human herpesvirus 8 type P
Query: 1 CLIWTVRSRH 10
C + ++SRH
Sbjct: 229 CFLSLIKSRH 238
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 CLIWTVRSR 9
C +W V+ R
Sbjct: 778 CCVWYVKGR 786
92|Sequence|456|465|VRSRHQLAML
***** No hits found ******
93|Sequence|461|470|QLAMLCSPCI
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 LAMLCSPCI 10
+ + CSPC+
Sbjct: 43 VGLQCSPCL 51
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 2 LAMLCSPCI 10
+ + CSPC+
Sbjct: 43 VGLQCSPCL 51
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 2 LAMLCSPCI 10
+ + CSPC+
Sbjct: 43 VGLQCSPCL 51
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 2 LAMLCSPCI 10
+ + CSPC+
Sbjct: 43 VGLQCSPCL 51
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 5 LCSPCI 10
+C+PCI
Sbjct: 259 VCNPCI 264
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 2 LAMLCSPCI 10
+ + CSPC+
Sbjct: 43 VGLQCSPCL 51
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 5 LCSPCI 10
+C+PCI
Sbjct: 269 VCNPCI 274
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 5 LCSPCI 10
+C+PCI
Sbjct: 269 VCNPCI 274
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 4 MLCSPC 9
M C+PC
Sbjct: 1 MSCTPC 6
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 4 MLCSPC 9
M C+PC
Sbjct: 1 MSCTPC 6
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 4 MLCSPC 9
M C+PC
Sbjct: 1 MSCTPC 6
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LCSPC 9
+C+PC
Sbjct: 472 ICTPC 476
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LCSPC 9
+C+PC
Sbjct: 474 ICAPC 478
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 LCSPC 9
+C+PC
Sbjct: 474 ICAPC 478
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QLAMLCSPC 9
+L ++CS C
Sbjct: 8 KLCVVCSKC 16
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LAMLCSPCI 10
L ++C CI
Sbjct: 371 LTLICIACI 379
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QLAMLCSPC 9
+L ++CS C
Sbjct: 8 KLCVVCSKC 16
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 4 MLCSPC 9
++CSPC
Sbjct: 148 VICSPC 153
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 4 MLCSPC 9
++CSPC
Sbjct: 148 VICSPC 153
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 4 MLCSPC 9
++CSPC
Sbjct: 148 VICSPC 153
94|Sequence|466|475|CSPCILLYGM
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 CSPCILLYGM 10
C+PCIL+Y +
Sbjct: 270 CNPCILVYNI 279
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 CSPCILLYGM 10
C+PCIL+Y +
Sbjct: 270 CNPCILVYNI 279
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 CSPCILLYGM 10
C+PCI++Y +
Sbjct: 260 CNPCIVVYNI 269
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 4 CILLYG 9
CILLYG
Sbjct: 465 CILLYG 470
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 4 CILLYG 9
CILLYG
Sbjct: 455 CILLYG 460
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 4 CILLYG 9
CILLYG
Sbjct: 472 CILLYG 477
>sp|VP35_MABVP|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 CSPCIL 6
CSPC++
Sbjct: 47 CSPCLM 52
>sp|VP35_MABVO|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 CSPCIL 6
CSPC++
Sbjct: 47 CSPCLM 52
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 CSPCIL 6
CSPC++
Sbjct: 47 CSPCLM 52
>sp|VP35_MABVA|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 CSPCIL 6
CSPC++
Sbjct: 47 CSPCLM 52
>sp|VP35_MABVR|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 CSPCIL 6
CSPC++
Sbjct: 47 CSPCLI 52
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 CSP---CILLYG 9
C+P CI++YG
Sbjct: 411 CTPKKMCIVIYG 422
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 PCILLYGM 10
PC+ +Y M
Sbjct: 1609 PCLCMYAM 1616
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 PCILLYGM 10
PC+ +Y M
Sbjct: 1609 PCLCMYAM 1616
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 4 CILLYG 9
CIL+YG
Sbjct: 429 CILIYG 434
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 4 CILLYG 9
CIL+YG
Sbjct: 458 CILIYG 463
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 4 CILLYG 9
CIL+YG
Sbjct: 426 CILIYG 431
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 4 CILLYG 9
CIL+YG
Sbjct: 427 CILIYG 432
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 4 CILLYG 9
CIL+YG
Sbjct: 428 CILIYG 433
>sp|VE1_HPV12|REPLICATION protein E1|Human papillomavirus 12
Query: 4 CILLYG 9
CIL+YG
Sbjct: 427 CILIYG 432
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 4 CILLYG 9
CIL+YG
Sbjct: 429 CILIYG 434
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 4 CILLYG 9
CI+LYG
Sbjct: 473 CIVLYG 478
>sp|VE6_HPV34|PROTEIN E6|Human papillomavirus type 34
Query: 1 CSPCILLY 8
C PC+L Y
Sbjct: 64 CQPCLLFY 71
>sp|VE1_HPV25|REPLICATION protein E1|Human papillomavirus 25
Query: 4 CILLYG 9
CIL YG
Sbjct: 427 CILFYG 432
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 3 PCILLY 8
PC+L+Y
Sbjct: 389 PCVLVY 394
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CSPCILLY 8
C CILL+
Sbjct: 375 CIACILLF 382
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 CSPCILLYGM 10
C CI YG+
Sbjct: 305 CVSCIQTYGI 314
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 3 PCILLYGM 10
PC +YG+
Sbjct: 1678 PCFSVYGL 1685
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 CSPCILL 7
CSP ILL
Sbjct: 552 CSPRILL 558
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 3 PCILLYGM 10
PC L+Y +
Sbjct: 342 PCQLMYAL 349
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 PCILLYGM 10
PC L+Y +
Sbjct: 342 PCQLMYAL 349
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PCILLYGM 10
PC L+Y +
Sbjct: 342 PCQLMYAL 349
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 3 PCILLYGM 10
PC L+Y +
Sbjct: 342 PCQLMYAL 349
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 4 CILLYG 9
C+L+YG
Sbjct: 427 CLLIYG 432
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 4 CILLYG 9
C+L+YG
Sbjct: 430 CLLIYG 435
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 4 CILLYG 9
C+L+YG
Sbjct: 430 CLLIYG 435
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 4 CILLYG 9
C+L+YG
Sbjct: 426 CLLIYG 431
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 PCILLYG 9
PC +YG
Sbjct: 1592 PCFTVYG 1598
>sp|ORF2_ZIKVK|UORF2 protein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 SPCILLYGM 10
SPC L+G+
Sbjct: 31 SPCEPLWGL 39
>sp|ORF2_ZIKVF|UORF2 protein|Zika virus (isolate ZIKV/Human/French
Query: 2 SPCILLYGM 10
SPC L+G+
Sbjct: 31 SPCEPLWGL 39
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 4 CILLYG 9
C+L+YG
Sbjct: 425 CMLIYG 430
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 4 CILLYG 9
CI++YG
Sbjct: 469 CIVIYG 474
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 CILLYG 9
CI++YG
Sbjct: 470 CIVIYG 475
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 4 CILLYG 9
C++LYG
Sbjct: 468 CLVLYG 473
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 CSPCIL 6
C PC+L
Sbjct: 226 CVPCVL 231
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 SPCILL 7
+PC+LL
Sbjct: 2009 NPCVLL 2014
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 4 CILLYG 9
CI++YG
Sbjct: 458 CIVIYG 463
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 4 CILLYG 9
CI++YG
Sbjct: 462 CIVIYG 467
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 4 CILLYG 9
C++LYG
Sbjct: 454 CLVLYG 459
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 4 CILLYG 9
CI++YG
Sbjct: 458 CIVIYG 463
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 4 CILLYG 9
C+L YG
Sbjct: 432 CLLFYG 437
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1597 PCLCRYAM 1604
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1593 PCLCRYAM 1600
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 261 PCLCRYAM 268
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1592 PCLCRYAM 1599
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1595 PCLCRYAM 1602
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1593 PCLCRYAM 1600
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1594 PCLCRYAM 1601
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 PCILLYGM 10
PC+ Y M
Sbjct: 1592 PCLCRYAM 1599
>sp|VE1_HPV57|REPLICATION protein E1|Human papillomavirus 57
Query: 4 CILLYG 9
CI+ YG
Sbjct: 466 CIVFYG 471
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 4 CILLYG 9
CI+ YG
Sbjct: 466 CIVFYG 471
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 4 CILLYG 9
CI+ YG
Sbjct: 466 CIVFYG 471
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 4 CILLYG 9
CI+ YG
Sbjct: 482 CIVFYG 487
>sp|GK_VZVO|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Oka vaccine)
Query: 2 SPCILLY 8
+PC LLY
Sbjct: 239 TPCALLY 245
>sp|GK_VZVD|ENVELOPE glycoprotein K|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 SPCILLY 8
+PC LLY
Sbjct: 239 TPCALLY 245
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1209 CLLLHG 1214
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1233 CLLLHG 1238
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1234 CLLLHG 1239
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1230 CLLLHG 1235
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1223 CLLLHG 1228
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1240 CLLLHG 1245
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1242 CLLLHG 1247
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1223 CLLLHG 1228
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1232 CLLLHG 1237
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1226 CLLLHG 1231
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1235 CLLLHG 1240
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1222 CLLLHG 1227
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1221 CLLLHG 1226
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 CSPCI 5
C PCI
Sbjct: 226 CVPCI 230
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1232 CLLLHG 1237
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1224 CLLLHG 1229
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 CSPCI 5
C PCI
Sbjct: 226 CVPCI 230
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1224 CLLLHG 1229
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1222 CLLLHG 1227
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 4 CILLYG 9
C+LL+G
Sbjct: 1224 CLLLHG 1229
95|Sequence|471|480|LLYGMTLCCL
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 4 GMTLCCL 10
GMT+ CL
Sbjct: 85 GMTIFCL 91
>sp|GCVK_HHV6U|PROBABLE ganciclovir kinase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YGMTLCCL 10
YG TLC L
Sbjct: 147 YGETLCNL 154
>sp|GCVK_HHV6Z|PROBABLE ganciclovir kinase|Human herpesvirus 6B (strain Z29)
Query: 3 YGMTLCCL 10
YG TLC L
Sbjct: 148 YGETLCNL 155
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 GMTLCCL 10
GMT CL
Sbjct: 1664 GMTAACL 1670
96|Sequence|476|485|TLCCLRYVWA
>sp|VE2_HPV41|REGULATORY protein E2|Human papillomavirus type 41
Query: 1 TLCCLRYVW 9
+L CLRY W
Sbjct: 315 SLRCLRYKW 323
>sp|YVDH_VACCC|UNCHARACTERIZED 7.2 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 LRYVWA 10
LRY+W+
Sbjct: 38 LRYLWS 43
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 TLCCLRY 7
T CLRY
Sbjct: 1666 TAACLRY 1672
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 CLRYVWA 10
C R+ WA
Sbjct: 821 CYRHPWA 827
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 CLRYVWA 10
C R+ WA
Sbjct: 804 CYRHPWA 810
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 CCLRYV 8
CC R+V
Sbjct: 1376 CCTRHV 1381
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 CCLRYV 8
CC R+V
Sbjct: 1376 CCTRHV 1381
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 CCLRYV 8
CC R+V
Sbjct: 1376 CCTRHV 1381
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 CCLRYVWA 10
C L VWA
Sbjct: 932 CTLEGVWA 939
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 CCLRYV 8
CC R+V
Sbjct: 1376 CCTRHV 1381
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 CCLRYV 8
CC R+V
Sbjct: 1376 CCTRHV 1381
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 CLRYVWA 10
CLR +W+
Sbjct: 1986 CLRCLWS 1992
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 CLRYVWA 10
CLR +W+
Sbjct: 1986 CLRCLWS 1992
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 LCCLR 6
LCC+R
Sbjct: 734 LCCIR 738
>sp|SPIKE_ADE07|FIBER protein|Human adenovirus B serotype 7
Query: 4 CLRYVWA 10
C+R W+
Sbjct: 307 CIRVTWS 313
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LCCLRY 7
LC LRY
Sbjct: 140 LCYLRY 145
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 2 LCCLRY 7
LC LRY
Sbjct: 173 LCYLRY 178
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 2 LCCLRY 7
LC LRY
Sbjct: 143 LCYLRY 148
>sp|SPIKE_ADE1P|FIBER protein|Human adenovirus B serotype 11
Query: 4 CLRYVWA 10
C+R W+
Sbjct: 289 CIRITWS 295
>sp|SPIKE_ADE1A|FIBER protein|Human adenovirus B serotype 11
Query: 4 CLRYVWA 10
C+R W+
Sbjct: 289 CIRITWS 295
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 LCCLR 6
LCC+R
Sbjct: 743 LCCVR 747
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 LCCLR 6
LCC+R
Sbjct: 743 LCCVR 747
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 2 LCCLRY 7
L C+RY
Sbjct: 544 LACIRY 549
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 TLCCLRYVWA 10
T CC R V A
Sbjct: 1349 TKCCTREVPA 1358
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 TLCCLRYVWA 10
T CC R V A
Sbjct: 1349 TKCCTREVPA 1358
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LCCLRYVWA 10
L C RYV A
Sbjct: 929 LACGRYVQA 937
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 LCCLR 6
LCC+R
Sbjct: 740 LCCVR 744
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 LCCLR 6
LCC+R
Sbjct: 743 LCCVR 747
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LCCLRY 7
L CLRY
Sbjct: 6091 LTCLRY 6096
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LCCLRY 7
L CLRY
Sbjct: 6179 LTCLRY 6184
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LCCLRY 7
L CLRY
Sbjct: 6149 LTCLRY 6154
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LCCLRY 7
L CLRY
Sbjct: 6129 LTCLRY 6134
97|Sequence|481|490|RYVWAMDLRP
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 4 WAMDLRP 10
W M++RP
Sbjct: 577 WGMEMRP 583
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 4 WAMDLRP 10
W M++RP
Sbjct: 577 WGMEMRP 583
>sp|ETF1_YMTV5|EARLY transcription factor 70 kDa|Yaba monkey tumor virus (strain
Query: 1 RYVWAMDLR 9
R+VW ++ R
Sbjct: 618 RFVWGVNFR 626
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RYVWAMDLRP 10
R++WA +RP
Sbjct: 438 RFIWAHYVRP 447
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RYVWAMDLRP 10
R++WA +RP
Sbjct: 438 RFIWAHYVRP 447
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RYVWAMDLRP 10
R++WA +RP
Sbjct: 438 RFIWAHYVRP 447
>sp|CEP2_HHV11|CYTOPLASMIC envelopment protein 2|Human herpesvirus 1 (strain 17)
Query: 2 YVWAMD 7
Y WAMD
Sbjct: 209 YCWAMD 214
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 173 WLWGMDIDP 181
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 RYVWAMDLRP 10
R+V +D RP
Sbjct: 541 RFVRQIDFRP 550
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 YVWAMD 7
Y WAMD
Sbjct: 207 YCWAMD 212
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 RYVWAMDLRP 10
R+V +D RP
Sbjct: 542 RFVRQIDFRP 551
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 RYVWAMDLRP 10
R+V +D RP
Sbjct: 542 RFVRQIDFRP 551
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YVWAMDLRP 10
Y AMDL P
Sbjct: 1017 YTPAMDLNP 1025
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YVWAMDLRP 10
Y AMDL P
Sbjct: 1021 YTPAMDLNP 1029
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YVWAMDLRP 10
Y AMDL P
Sbjct: 1020 YTPAMDLNP 1028
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 WAMDLRP 10
W M LRP
Sbjct: 624 WPMPLRP 630
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 WAMDLRP 10
W M LRP
Sbjct: 624 WPMPLRP 630
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 WAMDLRP 10
W M LRP
Sbjct: 624 WPMPLRP 630
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWGMDIDP 34
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 4 WAMDLRP 10
W +DL P
Sbjct: 1684 WIIDLNP 1690
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 YVWAMDLRP 10
++W MD+ P
Sbjct: 26 WLWDMDIDP 34
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 WAMDLRP 10
W +DL P
Sbjct: 1684 WIIDLNP 1690
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 AMDLRP 10
A+DLRP
Sbjct: 2305 ALDLRP 2310
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 AMDLRP 10
A+DLRP
Sbjct: 2305 ALDLRP 2310
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 AMDLRP 10
A+DLRP
Sbjct: 2305 ALDLRP 2310
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 AMDLRP 10
A+DLRP
Sbjct: 2305 ALDLRP 2310
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 5 AMDLRP 10
A+DLRP
Sbjct: 2307 ALDLRP 2312
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1124 YAMEIRP 1130
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1110 YAMEIRP 1116
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 YVWAMDLRP 10
Y W LRP
Sbjct: 485 YCWHYALRP 493
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1110 YAMEIRP 1116
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 WAMDLRP 10
+AM++RP
Sbjct: 1108 YAMEIRP 1114
98|Sequence|486|495|MDLRPELPTT
>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12
Query: 2 DLRPELPTT 10
D PELPTT
Sbjct: 12 DSTPELPTT 20
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 DLRPELPT 9
D+RP +PT
Sbjct: 1647 DIRPHIPT 1654
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 DLRPELPT 9
D+RP +PT
Sbjct: 1648 DIRPHIPT 1655
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 DLRPELPT 9
D+RP +PT
Sbjct: 1650 DIRPHIPT 1657
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 DLRPELPT 9
D+RP +PT
Sbjct: 1648 DIRPHIPT 1655
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 DLRPELPT 9
D+RP +PT
Sbjct: 1650 DIRPHIPT 1657
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 DLRPELPT 9
D+RP +PT
Sbjct: 1655 DIRPHIPT 1662
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 MDLRPELPTT 10
++L PE PT+
Sbjct: 322 LNLIPETPTS 331
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 MDLRPEL 7
+D+RPE+
Sbjct: 60 LDIRPEV 66
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 MDLRPEL 7
+D+RPE+
Sbjct: 60 LDIRPEV 66
>sp|UL84_HCMVT|UL84 protein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 MDLRPE 6
+DLRPE
Sbjct: 114 LDLRPE 119
>sp|UL84_HCMVM|PROTEIN UL84|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MDLRPE 6
+DLRPE
Sbjct: 114 LDLRPE 119
>sp|UL84_HCMVA|PROTEIN UL84|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MDLRPE 6
+DLRPE
Sbjct: 114 LDLRPE 119
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DLRPELPTT 10
D++P LP T
Sbjct: 225 DIKPALPDT 233
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 5 PELPTT 10
PELP T
Sbjct: 94 PELPVT 99
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 5 PELPTT 10
P++PTT
Sbjct: 532 PDIPTT 537
99|Sequence|491|500|ELPTTLGPVS
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 1 ELPTTLGP 8
ELP + GP
Sbjct: 75 ELPASWGP 82
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 ELPTTLGPVS 10
+LP+T+G V+
Sbjct: 804 KLPSTVGSVT 813
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 ELPTTLGPV 9
E P LGPV
Sbjct: 871 EYPHVLGPV 879
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 LPTTLGPVS 10
+P TLGP S
Sbjct: 26 IPDTLGPWS 34
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 2 LPTTLGPVS 10
+PT LGP S
Sbjct: 26 IPTKLGPWS 34
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 1 ELPTTLGP 8
E P LGP
Sbjct: 70 EFPAVLGP 77
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PTTLGPV 9
PT+ GP+
Sbjct: 4692 PTSFGPL 4698
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 PTTLGPV 9
PT+ GP+
Sbjct: 4715 PTSFGPL 4721
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 1 ELPTTL 6
ELPTT+
Sbjct: 17 ELPTTI 22
>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12
Query: 1 ELPTTL 6
ELPTT+
Sbjct: 16 ELPTTI 21
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LPTTLGP 8
LP T GP
Sbjct: 713 LPATRGP 719
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 TTLGPV 9
TTLGP+
Sbjct: 1799 TTLGPL 1804
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 1 ELPTTLGPVS 10
+LP T G +S
Sbjct: 542 QLPQTFGEIS 551
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 2 LPTTLGPV 9
+P T+GPV
Sbjct: 92 VPETIGPV 99
>sp|VP22_HHV11|TEGUMENT protein VP22|Human herpesvirus 1 (strain 17)
Query: 1 ELPTTLGPVS 10
E+P T PVS
Sbjct: 80 EVPRTRRPVS 89
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 PTTLGP 8
PTT GP
Sbjct: 1000 PTTWGP 1005
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 PTTLGP 8
PTT GP
Sbjct: 979 PTTWGP 984
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 1 ELPTTLGPVS 10
+LP T G +S
Sbjct: 542 QLPQTFGEIS 551
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 PTTLGP 8
PTT GP
Sbjct: 980 PTTWGP 985
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 PTTLGP 8
PTT GP
Sbjct: 981 PTTWGP 986
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 2 LPTTLGP 8
L TT+GP
Sbjct: 75 LGTTIGP 81
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 2 LPTTLGP 8
L TT+GP
Sbjct: 75 LGTTIGP 81
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 2 LPTTLGP 8
L TT+GP
Sbjct: 75 LGTTIGP 81
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 2 LPTTLGP 8
L TT+GP
Sbjct: 75 LGTTIGP 81
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 2 LPTTLGP 8
L TT+GP
Sbjct: 75 LGTTIGP 81
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 2 LPTTLGP 8
L TT+GP
Sbjct: 75 LGTTIGP 81
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 2 LPTTLGPVS 10
+P T+GPV
Sbjct: 92 VPETVGPVD 100
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LPTTLGPVS 10
LPT L P +
Sbjct: 571 LPTPLAPAA 579
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LPTTLGPVS 10
LPT L P +
Sbjct: 571 LPTPLAPAA 579
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LPTTLGPVS 10
LPT L P +
Sbjct: 571 LPTPLAPAA 579
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 LPTTLGP 8
LPT+ GP
Sbjct: 772 LPTSAGP 778
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 LPTTLGP 8
LPT+ GP
Sbjct: 772 LPTSAGP 778
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 LPTTLGPVS 10
+PTT+ P+S
Sbjct: 143 VPTTVSPIS 151
100|Sequence|496|505|LGPVSLRQLG
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LGPVSLRQL 9
L PV+LRQ+
Sbjct: 4144 LSPVALRQM 4152
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LGPVSLRQL 9
L PV+LRQ+
Sbjct: 4121 LSPVALRQM 4129
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LGPVSLRQL 9
L PV+LRQ+
Sbjct: 4144 LSPVALRQM 4152
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LGPVSLRQL 9
L PV+LRQ+
Sbjct: 4121 LSPVALRQM 4129
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 VSLRQLG 10
+SLRQLG
Sbjct: 279 ISLRQLG 285
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 VSLRQLG 10
+SLRQLG
Sbjct: 280 MSLRQLG 286
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 LGPVSLRQ 8
LGPV +RQ
Sbjct: 163 LGPVRVRQ 170
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 LGPVSLRQ 8
LGPV +RQ
Sbjct: 163 LGPVRVRQ 170
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 3 PVSLRQL 9
P+SLRQ
Sbjct: 141 PISLRQF 147
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GPVSLRQL 9
GP LRQL
Sbjct: 460 GPCILRQL 467
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GPVSLRQL 9
GP LRQL
Sbjct: 460 GPCILRQL 467
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GPVSLRQL 9
GP LRQL
Sbjct: 460 GPCILRQL 467
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GPVSLRQL 9
GP LRQL
Sbjct: 460 GPCILRQL 467
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GPVSLRQL 9
GP LRQL
Sbjct: 460 GPCILRQL 467
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 GPVSLRQL 9
GP LRQL
Sbjct: 460 GPCILRQL 467
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LGPVSLRQL 9
+GP +RQL
Sbjct: 460 VGPCVIRQL 468
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LGPVSLRQL 9
+GP +RQL
Sbjct: 462 VGPCVIRQL 470
101|Sequence|501|510|LRQLGLEHTR
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 2 RQLGLEH 8
RQ+GL H
Sbjct: 47 RQMGLSH 53
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 LRQLGLEHT 9
L Q GL+HT
Sbjct: 494 LFQAGLQHT 502
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 1 LRQLGLEHTR 10
LRQ GL+ R
Sbjct: 72 LRQRGLQDVR 81
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 1 LRQLGLEHTR 10
LRQ GL+ R
Sbjct: 72 LRQRGLQDVR 81
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 QLGLEHT 9
QLG+ HT
Sbjct: 671 QLGIPHT 677
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 2 RQLGLEH 8
RQ+G++H
Sbjct: 47 RQMGIKH 53
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 2 RQLGLEH 8
+Q+GL H
Sbjct: 47 KQMGLSH 53
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 2 RQLGLEH 8
+Q+GL H
Sbjct: 47 KQMGLNH 53
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 2 RQLGLEH 8
+Q+GL H
Sbjct: 47 KQMGLNH 53
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LGLEH 8
LGLEH
Sbjct: 511 LGLEH 515
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LGLEH 8
LGLEH
Sbjct: 511 LGLEH 515
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 LGLEH 8
LGLEH
Sbjct: 511 LGLEH 515
>sp|VE2_HPV6A|REGULATORY protein E2|Human papillomavirus type 6a
Query: 2 RQLGLEH 8
+Q+GL H
Sbjct: 47 KQMGLSH 53
>sp|VE2_HPV6B|REGULATORY protein E2|Human papillomavirus type 6b
Query: 2 RQLGLEH 8
+Q+GL H
Sbjct: 47 KQMGLSH 53
>sp|PRO_HTL1C|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 LGLEH 8
LGLEH
Sbjct: 582 LGLEH 586
>sp|PRO_HTL1A|GAG-PRO polyprotein|Human T-cell leukemia virus 1
Query: 4 LGLEH 8
LGLEH
Sbjct: 582 LGLEH 586
102|Sequence|506|515|LEHTRYPCLD
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 1 LEHTRYP 7
+EH+R+P
Sbjct: 609 IEHSRFP 615
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 HTRYPC 8
HTR PC
Sbjct: 2026 HTRCPC 2031
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 TRYPCLD 10
TR PC+D
Sbjct: 100 TRVPCVD 106
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TRYPCLD 10
TR PC+D
Sbjct: 100 TRVPCVD 106
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 RYPCL 9
RYPC+
Sbjct: 1102 RYPCI 1106
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 RYPCL 9
RYPC+
Sbjct: 1102 RYPCI 1106
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 RYPCL 9
RYPC+
Sbjct: 1102 RYPCI 1106
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 5 RYPCL 9
RYPCL
Sbjct: 66 RYPCL 70
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 4 TRYPCL 9
TRYP L
Sbjct: 277 TRYPAL 282
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 TRYPCL 9
TRYP L
Sbjct: 277 TRYPAL 282
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 EHTRYP 7
+HT+YP
Sbjct: 4 QHTQYP 9
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LEHTRYPCL 9
L+H Y CL
Sbjct: 5115 LQHRLYECL 5123
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 5 RYPCL 9
RYPC+
Sbjct: 1102 RYPCI 1106
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LEHTRYPCL 9
L+H Y CL
Sbjct: 5092 LQHRLYECL 5100
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 308 LEHGLYPQL 316
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 308 LEHGLYPQL 316
>sp|FUS_HMPVC|FUSION glycoprotein F0|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 TRYPC 8
T YPC
Sbjct: 357 TNYPC 361
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 290 LEHGLYPQL 298
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 LEHTRY 6
LEH RY
Sbjct: 614 LEHARY 619
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 290 LEHGLYPQL 298
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96)
Query: 2 EHTRYP 7
+HT+YP
Sbjct: 4 QHTQYP 9
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 290 LEHGLYPQL 298
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 290 LEHGLYPQL 298
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 290 LEHGLYPQL 298
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 EHTRYP 7
+HT+YP
Sbjct: 4 QHTQYP 9
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 EHTRYP 7
+HT+YP
Sbjct: 4 QHTQYP 9
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 EHTRYP 7
+HT+YP
Sbjct: 5 QHTQYP 10
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 EHTRYP 7
+HT+YP
Sbjct: 5 QHTQYP 10
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 308 LEHGLYPQL 316
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 LEHTRYPCL 9
LEH YP L
Sbjct: 308 LEHGLYPQL 316
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 RYPCL 9
RYPC+
Sbjct: 66 RYPCI 70
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EHTRYPCL 9
+H++ PCL
Sbjct: 333 DHSQGPCL 340
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 HTRYPC 8
H R PC
Sbjct: 2026 HARCPC 2031
103|Sequence|511|520|YPCLDLGAML
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 YPCLDLGAM 9
YP LD+ AM
Sbjct: 271 YPTLDVFAM 279
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 1 YPCLDLGAM 9
YP LD+ AM
Sbjct: 271 YPTLDVFAM 279
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 1 YPCLDLGAML 10
YP DLG+++
Sbjct: 314 YPTYDLGSIV 323
>sp|PG107_VAR67|LATE protein H2|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YPCLDLGA 8
+ C+D GA
Sbjct: 100 FKCVDFGA 107
>sp|PG107_VACCC|PROTEIN H2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YPCLDLGA 8
+ C+D GA
Sbjct: 100 FKCVDFGA 107
>sp|PG107_MONPV|MPXVGP092 virus (MPXV)
Query: 1 YPCLDLGA 8
+ C+D GA
Sbjct: 100 FKCVDFGA 107
>sp|H2_VARV|LATE protein H2|Variola virus
Query: 1 YPCLDLGA 8
+ C+D GA
Sbjct: 100 FKCVDFGA 107
>sp|H2_VACCA|LATE protein H2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YPCLDLGA 8
+ C+D GA
Sbjct: 100 FKCVDFGA 107
>sp|VE4_HPV28|PROTEIN E4|Human papillomavirus 28
Query: 1 YPCLDLGA 8
YP LDL A
Sbjct: 10 YPLLDLCA 17
>sp|VE4_HPV29|PROTEIN E4|Human papillomavirus 29
Query: 1 YPCLDL 6
YP LDL
Sbjct: 10 YPLLDL 15
>sp|GI_HHV2H|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain HG52)
Query: 1 YPCLDLG 7
YP L+LG
Sbjct: 119 YPTLELG 125
>sp|GI_HHV23|ENVELOPE glycoprotein I|Human herpesvirus 2 (strain 333)
Query: 1 YPCLDLG 7
YP L+LG
Sbjct: 119 YPTLELG 125
>sp|VE4_HPV57|PROTEIN E4|Human papillomavirus 57
Query: 1 YPCLDL 6
YP LDL
Sbjct: 17 YPLLDL 22
>sp|AN_HHV8P|SHUTOFF alkaline exonuclease|Human herpesvirus 8 type P
Query: 3 CLDLGAM 9
CLD G M
Sbjct: 202 CLDYGFM 208
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 CLDLG 7
CLD+G
Sbjct: 540 CLDIG 544
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CLDLG 7
CLD+G
Sbjct: 540 CLDIG 544
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 3 CLDLGA 8
C DLGA
Sbjct: 372 CKDLGA 377
>sp|E3B14_ADE05|EARLY E3B 14.6 kDa protein|Human adenovirus C serotype 5
Query: 1 YPCLDLG 7
YP LD+G
Sbjct: 72 YPYLDIG 78
>sp|E3B14_ADE06|EARLY E3B 14.5 kDa protein|Human adenovirus C serotype 6
Query: 1 YPCLDLG 7
YP LD+G
Sbjct: 74 YPYLDIG 80
>sp|E3RDB_ADE02|EARLY 3 receptor internalization and|Human adenovirus C serotype 2
Query: 1 YPCLDLG 7
YP LD+G
Sbjct: 74 YPYLDIG 80
104|Sequence|516|525|LGAMLLYTLT
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LGAMLLYTLT 10
LG M L+TLT
Sbjct: 1472 LGVMGLWTLT 1481
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LGAMLLYTLT 10
LG M L+TLT
Sbjct: 1472 LGVMGLWTLT 1481
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LGAMLLYTLT 10
LG M L+TLT
Sbjct: 1472 LGVMGLWTLT 1481
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 LGAMLLYTLT 10
LGAM++ T+T
Sbjct: 2199 LGAMVMATVT 2208
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 GAMLLYTLT 10
GA L+YT+T
Sbjct: 2503 GASLIYTVT 2511
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 GAMLLYTLT 10
GA L+YT+T
Sbjct: 2503 GASLIYTVT 2511
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 GAMLLYTLT 10
GA L+YT+T
Sbjct: 2499 GASLIYTVT 2507
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 2 GAMLLYTLT 10
G M LY LT
Sbjct: 334 GCMFLYILT 342
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LGAMLLYTLT 10
+G M L+TLT
Sbjct: 1472 IGVMGLWTLT 1481
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LGAMLLYTLT 10
LG M L+TL+
Sbjct: 1472 LGVMGLWTLS 1481
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 GAMLLYTL 9
GAML +TL
Sbjct: 2372 GAMLHWTL 2379
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 GAMLLYTL 9
GAML +TL
Sbjct: 2372 GAMLHWTL 2379
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 GAMLLYTL 9
GAML +TL
Sbjct: 2372 GAMLHWTL 2379
105|Sequence|521|530|LYTLTFWLLL
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LYTLTFWLLL 10
L+T+ WLLL
Sbjct: 2203 LFTIAMWLLL 2212
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LYTLTFWLLL 10
L+T+ WLLL
Sbjct: 2203 LFTIAMWLLL 2212
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 3 TLTFW 7
TLTFW
Sbjct: 491 TLTFW 495
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 3 TLTFW 7
T+TFW
Sbjct: 454 TMTFW 458
>sp|UL128_HCMVA|UNCHARACTERIZED protein UL128|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YTLTFWLLL 10
+ T WLLL
Sbjct: 9 FLTTLWLLL 17
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 1 LYTLTFW 7
+Y+LT W
Sbjct: 18 MYSLTTW 24
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 4 LTFWLL 9
LT+WL+
Sbjct: 550 LTYWLV 555
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 LYTLTFWL 8
+YT T W+
Sbjct: 3294 VYTTTIWV 3301
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 LYTLTFWLLL 10
+YT+ WL+L
Sbjct: 2144 MYTVRNWLVL 2153
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 LYTLTFWL 8
+YT T W+
Sbjct: 3294 VYTTTIWV 3301
>sp|PG200_MONPV|PROTEIN OPG200|Monkeypox virus (MPXV)
Query: 2 YTLTFW 7
YT+ FW
Sbjct: 141 YTIIFW 146
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 3 TLTFWLLL 10
+L+FW L+
Sbjct: 897 SLSFWKLI 904
106|Sequence|526|535|FWLLLRQFVK
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 WLLLRQFVK 10
W++ RQFVK
Sbjct: 2593 WMVERQFVK 2601
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FWLLLRQF 8
+W+ LRQF
Sbjct: 419 YWIALRQF 426
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 FWLLLRQFVK 10
FW +LR+ V+
Sbjct: 1032 FWRILRRLVQ 1041
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 FWLLLRQFVK 10
FW +LR+ V+
Sbjct: 1032 FWRILRRLVQ 1041
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 WLLLRQFV 9
W++ R+F+
Sbjct: 2201 WMMFREFI 2208
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 WLLLRQFVK 10
WL+ R+FV+
Sbjct: 2593 WLVERRFVQ 2601
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 WLLLRQFV 9
W++ R+F+
Sbjct: 2201 WVMFREFI 2208
>sp|VE2_HPV08|REGULATORY protein E2|Human papillomavirus type 8
Query: 2 WLLLRQ 7
WLLLR+
Sbjct: 33 WLLLRK 38
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 1 FWLLLRQFVK 10
F + L+QF+K
Sbjct: 457 FLITLKQFLK 466
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 FWLLLRQFVK 10
F + L+QF+K
Sbjct: 454 FLIALKQFLK 463
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WLLLRQFVK 10
W LL +F K
Sbjct: 1989 WWLLAKFTK 1997
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 2 WLLLRQ 7
W LLRQ
Sbjct: 33 WQLLRQ 38
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 2 WLLLRQ 7
W LLRQ
Sbjct: 33 WQLLRQ 38
>sp|VE2_HPV17|REGULATORY protein E2|Human papillomavirus 17
Query: 2 WLLLRQ 7
W LLRQ
Sbjct: 33 WQLLRQ 38
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 WLLLR 6
WLLLR
Sbjct: 1276 WLLLR 1280
Query: 2 WLLLRQFVK 10
WL+ R F+K
Sbjct: 2584 WLVERGFLK 2592
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 WLLLRQFVK 10
W LL +F K
Sbjct: 1989 WWLLAKFTK 1997
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 2 WLLLRQ 7
W LLRQ
Sbjct: 33 WKLLRQ 38
>sp|VE2_HPV23|REGULATORY protein E2|Human papillomavirus 23
Query: 2 WLLLRQ 7
W LLRQ
Sbjct: 33 WKLLRQ 38
>sp|VE2_HPV22|REGULATORY protein E2|Human papillomavirus 22
Query: 2 WLLLRQ 7
W LLRQ
Sbjct: 33 WKLLRQ 38
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 WLLLRQFVK 10
WL+ R F K
Sbjct: 2585 WLVERGFAK 2593
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 1 FWLLLRQFVK 10
W+L R F+K
Sbjct: 40 LWILDRLFLK 49
>sp|BRLF1_EBVG|REPLICATION and transcription activator|Epstein-Barr virus (strain GD1)
Query: 1 FWLLLR 6
FW +LR
Sbjct: 78 FWAILR 83
>sp|BRLF1_EBVB9|REPLICATION and transcription activator|Epstein-Barr virus (strain B95-8)
Query: 1 FWLLLR 6
FW +LR
Sbjct: 78 FWAILR 83
>sp|BRFL1_EBVA8|REPLICATION and transcription activator|Epstein-Barr virus (strain AG876)
Query: 1 FWLLLR 6
FW +LR
Sbjct: 78 FWAILR 83
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 WLLLRQFVK 10
WL+ R+F++
Sbjct: 2589 WLVERRFLE 2597
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 WLLLRQFVK 10
WL+ R+F++
Sbjct: 2592 WLVERRFLE 2600
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 WLLLRQFVK 10
WL+ R+F++
Sbjct: 2592 WLVERRFLE 2600
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 WLLLRQFVK 10
W+ R FVK
Sbjct: 2588 WITERGFVK 2596
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 WLLLRQFVK 10
W L+ QF++
Sbjct: 399 WKLIAQFLR 407
107|Sequence|531|540|RQFVKEKLLK
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 1 RQFVKEKLLK 10
+QF++E LLK
Sbjct: 7 KQFLRENLLK 16
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 1 RQFVKEKLLK 10
+QF++E LLK
Sbjct: 7 KQFLRENLLK 16
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 1 RQFVKEKLLK 10
+QF +E LLK
Sbjct: 37 KQFSRENLLK 46
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)
Query: 1 RQFVKEKLLK 10
+QF +E LLK
Sbjct: 7 KQFSRENLLK 16
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 QFVKEKL 8
+F+KEKL
Sbjct: 1085 RFLKEKL 1091
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 3 FVKEKLL 9
F+K+KLL
Sbjct: 40 FLKQKLL 46
108|Sequence|536|545|EKLLKWAESP
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 1 EKLLKWA 7
+K+LKWA
Sbjct: 41 DKILKWA 47
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EKLLKWAESP 10
+K+L++AE+P
Sbjct: 149 KKILEYAETP 158
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)
Query: 2 KLLKWAES 9
KLLKW S
Sbjct: 254 KLLKWISS 261
>sp|US28_HCMVM|ENVELOPE protein US28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KLLKWAES 9
KLLKW S
Sbjct: 254 KLLKWISS 261
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)
Query: 2 KLLKWAES 9
KLLKW S
Sbjct: 254 KLLKWISS 261
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LKWAESP 10
L W ESP
Sbjct: 151 LNWTESP 157
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 4 LKWAESP 10
L W ESP
Sbjct: 211 LSWTESP 217
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 EKLLKW 6
EK+LKW
Sbjct: 1263 EKILKW 1268
>sp|VP9_CTFVL|STRUCTURAL protein VP9|Colorado tick fever virus (strain
Query: 2 KLLKWAESP 10
K L W+E P
Sbjct: 199 KNLTWSEGP 207
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 LLKWAES 9
L+KW ES
Sbjct: 188 LIKWLES 194
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 LLKWAES 9
L+KW ES
Sbjct: 188 LIKWLES 194
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 3 LLKWAES 9
L+KW ES
Sbjct: 188 LIKWLES 194
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 LLKWAES 9
L+KW ES
Sbjct: 188 LIKWLES 194
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 5 KWAESP 10
+WAE P
Sbjct: 712 EWAEDP 717
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 2 KLLKWAESP 10
K L W+E P
Sbjct: 199 KNLTWSEGP 207
>sp|VL2_HPV43|MINOR capsid protein L2|Human papillomavirus 43
Query: 1 EKLLKWA 7
+++LKWA
Sbjct: 42 DQILKWA 48
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 LLKWAES 9
LLKW E+
Sbjct: 1959 LLKWKET 1965
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 LLKWAES 9
LLKW E+
Sbjct: 1959 LLKWKET 1965
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 LLKWAES 9
LLKW E+
Sbjct: 1959 LLKWKET 1965
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 5 KWAESP 10
KW E+P
Sbjct: 714 KWVENP 719
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 LLKWAES 9
LLKW E+
Sbjct: 1959 LLKWKET 1965
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 5 KWAESP 10
KW E+P
Sbjct: 710 KWVENP 715
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 EKLLKWA 7
+++LKWA
Sbjct: 39 DRILKWA 45
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 3 LLKWAE 8
LLKW E
Sbjct: 184 LLKWLE 189
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 LLKWAE 8
LLKW E
Sbjct: 194 LLKWLE 199
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 LLKWAE 8
LLKW E
Sbjct: 194 LLKWLE 199
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 4 LKWAESP 10
++W++SP
Sbjct: 562 IQWSQSP 568
>sp|K7_HHV8P|PROTEIN K7|Human herpesvirus 8 type P
Query: 3 LLKWAESP 10
LL W +SP
Sbjct: 116 LLHWIQSP 123
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 1 EKLLKWA 7
+K+LKW
Sbjct: 41 DKILKWG 47
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 EKLLKWA 7
+K+LKW
Sbjct: 40 DKILKWG 46
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 EKLLKW 6
+KLL+W
Sbjct: 42 DKLLQW 47
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 LKWAESP 10
L+W E P
Sbjct: 89 LRWTERP 95
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 EKLLKWA 7
+K+LKW
Sbjct: 42 DKILKWG 48
109|Sequence|541|550|WAESPAALTE
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 2 AESPAALT 9
A+SPAALT
Sbjct: 1231 AQSPAALT 1238
Query: 1 WAESPAAL 8
W ESP+ L
Sbjct: 1300 WLESPSVL 1307
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 WAESPAAL 8
WAE P A+
Sbjct: 713 WAEDPGAM 720
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 WAESPAAL 8
W+++PA L
Sbjct: 564 WSQNPAML 571
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 AESPAALTE 10
AE PAAL +
Sbjct: 887 AEPPAALNK 895
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 WAESPAAL 8
W+++PA L
Sbjct: 564 WSQNPAIL 571
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 WAESPAAL 8
W++SP L
Sbjct: 564 WSQSPTML 571
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 2 AESPAALTE 10
++ PA LTE
Sbjct: 1730 SKEPAVLTE 1738
110|Sequence|546|555|AALTEVTVAD
>sp|BVLF1_EBVB9|LATE gene expression regulator BVLF1|Epstein-Barr virus (strain B95-8)
Query: 3 LTEVTVAD 10
L++VT+AD
Sbjct: 139 LSQVTLAD 146
111|Sequence|551|560|VTVADTEPTR
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VTVADTEPT 9
V V D EPT
Sbjct: 907 VIVHDVEPT 915
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 VTVADTEPT 9
V V D EPT
Sbjct: 907 VIVHDVEPT 915
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 VTVADTEPT 9
VTV DT P+
Sbjct: 392 VTVVDTTPS 400
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 VTVADTEPT 9
+TV DT P+
Sbjct: 232 ITVQDTHPS 240
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VTVADTEP 8
+TV D EP
Sbjct: 2389 ITVIDLEP 2396
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VTVADTEP 8
+TV D EP
Sbjct: 2389 ITVIDLEP 2396
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 VTVADTEP 8
+TV D EP
Sbjct: 2389 ITVIDLEP 2396
112|Sequence|556|565|TEPTRTQTLL
>sp|PG140_VARV|VIRION membrane protein OPG140|Variola virus
Query: 1 TEPTRTQTLL 10
T PTRT +L
Sbjct: 37 TSPTRTWKVL 46
>sp|PG140_VAR67|VIRION membrane protein OPG140|Variola virus (isolate
Query: 1 TEPTRTQTLL 10
T PTRT +L
Sbjct: 37 TSPTRTWKVL 46
>sp|PG140_VACCC|VIRION membrane protein OPG140|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TEPTRTQTLL 10
T PTRT +L
Sbjct: 37 TSPTRTWKVL 46
>sp|PG140_MONPV|VIRION membrane protein OPG140|Monkeypox virus (MPXV)
Query: 1 TEPTRTQTLL 10
T PTRT +L
Sbjct: 37 TSPTRTWKVL 46
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 TEPTRTQTL 9
T PTRT+ L
Sbjct: 1838 TTPTRTEIL 1846
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 EPTRTQTLL 10
EP + +TLL
Sbjct: 2643 EPAKCETLL 2651
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 EPTRTQTLL 10
EP + +TLL
Sbjct: 2643 EPAKCETLL 2651
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 1 TEPTRTQTL 9
T+P RT+ L
Sbjct: 173 TDPLRTRAL 181
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 EPTRTQTLL 10
EP + +TLL
Sbjct: 2643 EPLKCETLL 2651
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 2 EPTRTQTLL 10
EP QTLL
Sbjct: 355 EPALVQTLL 363
113|Sequence|561|570|TQTLLQSLGE
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 TQTLLQSLGE 10
+ T +QSLGE
Sbjct: 1693 STTSIQSLGE 1702
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 TQTLLQSLG 9
T+ LLQ+LG
Sbjct: 897 TRALLQTLG 905
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 TQTLLQSLG 9
T+ LLQ+LG
Sbjct: 897 TRALLQTLG 905
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 TQTLLQSLG 9
T+ LLQ+LG
Sbjct: 897 TRALLQTLG 905
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 TQTLLQS 7
TQT+LQ+
Sbjct: 186 TQTILQT 192
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 TQTLLQSLG 9
+ T+L+SLG
Sbjct: 237 SNTILKSLG 245
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TQTLLQSLG 9
+ T+L+SLG
Sbjct: 237 SNTILKSLG 245
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 TQTLLQSLG 9
+ T+L+SLG
Sbjct: 237 SNTILKSLG 245
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TQTLLQSLG 9
+ T+L+SLG
Sbjct: 237 SNTILKSLG 245
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TQTLLQSLG 9
+ T+L+SLG
Sbjct: 237 SNTILKSLG 245
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 TQTLLQSLG 9
+ T+L+SLG
Sbjct: 237 SNTILKSLG 245
114|Sequence|566|575|QSLGELVKGV
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 QSLGELVKGV 10
Q LG+L++GV
Sbjct: 578 QGLGDLIEGV 587
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 QSLGELVKGV 10
Q LG+L++GV
Sbjct: 578 QGLGDLIEGV 587
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GELVKG 9
GEL+KG
Sbjct: 343 GELLKG 348
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GELVKG 9
GEL+KG
Sbjct: 343 GELLKG 348
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 GELVKGV 10
G+LV+GV
Sbjct: 186 GQLVEGV 192
115|Sequence|571|580|LVKGVYAKYW
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 VKGVYAKYW 10
+KGV+ YW
Sbjct: 167 IKGVHVAYW 175
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 2 VKGVYAKYW 10
+KGVYA W
Sbjct: 459 LKGVYADAW 467
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 2 VKGVYAKYW 10
+KGVYA W
Sbjct: 459 LKGVYADAW 467
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 VKGVYAKYW 10
V+GV AK W
Sbjct: 44 VRGVVAKLW 52
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 166 IKGVRTAYW 174
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 166 IKGVRTAYW 174
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 167 IKGVRVAYW 175
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 167 IKGVRVAYW 175
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 167 IKGVRVAYW 175
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LVKGVYAKY 9
L+K YAKY
Sbjct: 601 LIKEAYAKY 609
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 1 LVKGVYAKY 9
L+K YAKY
Sbjct: 601 LIKEAYAKY 609
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LVKGVYAKY 9
L+K YAKY
Sbjct: 601 LIKEAYAKY 609
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 167 IKGVRLAYW 175
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 1 LVKGVYAKY 9
L+K YAKY
Sbjct: 601 LIKEAYAKY 609
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 1 LVKGVYAKY 9
L+K YAKY
Sbjct: 601 LIKEAYAKY 609
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 LVKGVYAKY 9
LVKGV KY
Sbjct: 38 LVKGVTRKY 46
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 165 LKGVRTAYW 173
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 168 MKGVRTAYW 176
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 167 MKGVRTAYW 175
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 KGVYAKYW 10
KGV YW
Sbjct: 168 KGVRVAYW 175
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 KGVYAKYW 10
KGV YW
Sbjct: 168 KGVRVAYW 175
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 KGVYAKYW 10
KGV YW
Sbjct: 168 KGVRVAYW 175
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 KGVYAKYW 10
KGV YW
Sbjct: 168 KGVRVAYW 175
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 LVKGVYAKY 9
LVKG+ KY
Sbjct: 38 LVKGITRKY 46
>sp|NS1_INBPA|NON-STRUCTURAL protein 1|Influenza B virus (strain B/PA/1979)
Query: 1 LVKGVYAKY 9
LV G++ KY
Sbjct: 188 LVNGIFLKY 196
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 4 GVYAKYW 10
G Y YW
Sbjct: 306 GAYPSYW 312
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 4 GVYAKYW 10
G Y YW
Sbjct: 306 GAYPSYW 312
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 165 MKGVRTVYW 173
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 168 MKGVRTLYW 176
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 168 MKGVRTLYW 176
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 165 LKGVRTIYW 173
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 165 LKGVRTIYW 173
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 165 LKGVRTIYW 173
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 VKGVYAKYW 10
+KGV YW
Sbjct: 165 LKGVRTIYW 173
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 VYAKYW 10
VY YW
Sbjct: 351 VYVNYW 356
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 351 VYVDYW 356
>sp|VP4_ROTH6|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 351 VYVDYW 356
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 VYAKYW 10
VY YW
Sbjct: 351 VYVDYW 356
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 LVKGVYAKYW 10
V+G+ YW
Sbjct: 1327 FVQGLKGDYW 1336
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 LVKGVYAKYW 10
V+G+ YW
Sbjct: 1327 FVQGLKGDYW 1336
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 3 KGVYAKYW 10
KG++ K W
Sbjct: 1511 KGIFEKDW 1518
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 KGVYAKYW 10
KG++ K W
Sbjct: 1511 KGIFEKDW 1518
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 3 KGVYAKYW 10
KG++ K W
Sbjct: 1511 KGIFEKDW 1518
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 5 VYAKYW 10
VY YW
Sbjct: 350 VYVDYW 355
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 LVKGVYAK 8
LV+G Y K
Sbjct: 1093 LVRGAYPK 1100
116|Sequence|576|585|YAKYWIYVCA
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 2 AKYWIYVC 9
A WI+VC
Sbjct: 232 ASVWIHVC 239
>sp|NCAP_BCCV|NUCLEOPROTEIN Creek Canal orthohantavirus (BCCV)
Query: 5 WIYVCA 10
WI+ CA
Sbjct: 305 WIFACA 310
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 YAKYWIYVCA 10
+ +YW+ CA
Sbjct: 252 WQEYWMRKCA 261
Query: 5 WIYVC 9
W++VC
Sbjct: 235 WLHVC 239
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 AKYWIY 7
A YW+Y
Sbjct: 1795 ANYWMY 1800
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 5 WIYVCA 10
W++ CA
Sbjct: 305 WVFACA 310
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 310 WVFACA 315
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 310 WVFACA 315
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 310 WVFACA 315
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 310 WVFACA 315
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 310 WVFACA 315
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 310 WVFACA 315
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 267 WVFACA 272
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 5 WIYVCA 10
W++ CA
Sbjct: 305 WVFACA 310
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 2 AKYWIYVC 9
A WI++C
Sbjct: 236 ASVWIHLC 243
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 2 AKYWIYVC 9
A WI++C
Sbjct: 236 ASVWIHLC 243
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 1 YAKYW 5
Y KYW
Sbjct: 182 YCKYW 186
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|PG043_MONPV|MONOGLYCERIDE lipase homolog|Monkeypox virus (MPXV)
Query: 1 YAKYW 5
Y KYW
Sbjct: 15 YCKYW 19
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 1 YAKYW 5
Y+KYW
Sbjct: 366 YSKYW 370
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 163 GKAWLHVC 170
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 2 AKYWIYV 8
A+YW Y+
Sbjct: 129 AQYWKYL 135
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 2 AKYWIYVC 9
K W++VC
Sbjct: 186 GKAWLHVC 193
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2575 WSYTCA 2580
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 YWIYVCA 10
YW Y C+
Sbjct: 216 YWGYGCS 222
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 YWIYVCA 10
YW Y C+
Sbjct: 216 YWGYGCS 222
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 1856 YSKHLLYNC 1864
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2020 YSKHLLYNC 2028
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2022 YSKHLLYNC 2030
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 5 WIYVC 9
WIY C
Sbjct: 375 WIYKC 379
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2023 YSKHLLYNC 2031
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2022 YSKHLLYNC 2030
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2023 YSKHLLYNC 2031
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2022 YSKHLLYNC 2030
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2577 WSYYCA 2582
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2577 WSYYCA 2582
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2577 WSYYCA 2582
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2577 WSYYCA 2582
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2577 WSYYCA 2582
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2580 WSYYCA 2585
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2580 WSYYCA 2585
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2022 YSKHLLYNC 2030
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2022 YSKHLLYNC 2030
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 YAKYWIYVC 9
Y+K+ +Y C
Sbjct: 2022 YSKHLLYNC 2030
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 3 KYWIYVC 9
+ WI VC
Sbjct: 173 QVWIMVC 179
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 AKYWIY 7
A+YW++
Sbjct: 1798 ARYWMH 1803
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 AKYWIY 7
A+YW++
Sbjct: 1798 ARYWMH 1803
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2579 WSYYCA 2584
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 5 WIYVC 9
WI VC
Sbjct: 175 WIMVC 179
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 3 KYWIYVC 9
KYW Y C
Sbjct: 76 KYWQYSC 82
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 5 WIYVC 9
WIY C
Sbjct: 376 WIYKC 380
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2611 WSYYCA 2616
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2611 WSYYCA 2616
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2607 WSYYCA 2612
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 YAKYWIY 7
YAK W++
Sbjct: 564 YAKGWLH 570
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 YAKYWIY 7
YAK W++
Sbjct: 564 YAKGWLH 570
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 2 AKYWIYVCA 10
+K W+ VC
Sbjct: 409 SKDWLSVCG 417
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2606 WSYYCA 2611
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 5 WIYVCA 10
W Y+C+
Sbjct: 74 WSYLCS 79
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 5 WIYVCA 10
W Y CA
Sbjct: 2608 WSYYCA 2613
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 5 WIYVC 9
W Y+C
Sbjct: 1677 WDYIC 1681
117|Sequence|581|590|IYVCAGMFIV
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 301 YICSGIF 307
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 297 YICSGVF 303
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 297 YICSGVF 303
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 301 YICSGVF 307
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 300 YICSGVF 306
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 288 YICSGVF 294
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 296 YICSGVF 302
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 YVCAGMF 8
Y+C+G+F
Sbjct: 316 YICSGVF 322
>sp|TRM3_HHV6U|TRIPARTITE terminase subunit 3|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IYVCAG 6
IYVC+G
Sbjct: 653 IYVCSG 658
>sp|TRM3_HHV6Z|TRIPARTITE terminase subunit 3|Human herpesvirus 6B (strain Z29)
Query: 1 IYVCAG 6
IYVC+G
Sbjct: 652 IYVCSG 657
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 VCAGMFIV 10
+C G+F+V
Sbjct: 280 LCGGLFLV 287
Query: 3 VCAGMFI 9
VC+G++I
Sbjct: 271 VCSGLYI 277
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 YVCAGMF 8
Y+C G+F
Sbjct: 117 YMCPGIF 123
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 YVCAGMF 8
Y+C G+F
Sbjct: 117 YMCPGIF 123
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 YVCAGMF 8
Y+C G+F
Sbjct: 117 YMCPGIF 123
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 3 VCAGMFIV 10
+C G+F+V
Sbjct: 280 LCGGIFLV 287
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 IYVCAGMFIV 10
+++C+ MF++
Sbjct: 1138 LFLCSDMFLM 1147
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 VCAGMFIV 10
+C G+F+V
Sbjct: 280 LCGGVFLV 287
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 VCAGMFIV 10
+C G+F+V
Sbjct: 280 LCGGVFLV 287
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VCAGMFIV 10
VCA MF +
Sbjct: 238 VCADMFFM 245
>sp|VB10_VACCT|KELCH repeat protein B10|Vaccinia virus (strain Tian Tan)
Query: 1 IYVCAGMFI 9
I+V G+FI
Sbjct: 26 IFVTGGLFI 34
>sp|VB10_VACCC|KELCH repeat protein B10|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IYVCAGMFI 9
I+V G+FI
Sbjct: 26 IFVTGGLFI 34
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 4 CAGMFIV 10
C+G F+V
Sbjct: 14 CSGWFVV 20
>sp|VB10_VACCA|KELCH repeat protein B10|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IYVCAGMFI 9
I+V G+FI
Sbjct: 26 IFVTGGLFI 34
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 IYVCAGMFIV 10
+YV AG+ ++
Sbjct: 684 LYVVAGLIVL 693
>sp|ATI_VAR67|A-TYPE inclusion protein A25 homolog|Variola virus (isolate
Query: 2 YVCAGMFI 9
Y C MF+
Sbjct: 139 YGCGNMFV 146
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 YVCAGMFI 9
Y C MF+
Sbjct: 139 YGCGNMFV 146
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IYVCAG 6
+YVC G
Sbjct: 75 LYVCCG 80
>sp|DR6_HHV6Z|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6B (strain Z29)
Query: 1 IYVCAG 6
+YVC G
Sbjct: 107 LYVCCG 112
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IYVCAG 6
+YVC G
Sbjct: 107 LYVCCG 112
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2579 YYCAGL 2584
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2579 YYCAGL 2584
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2579 YYCAGL 2584
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2579 YYCAGL 2584
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2579 YYCAGL 2584
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2582 YYCAGL 2587
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2581 YYCAGL 2586
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 YVCAGM 7
Y CAG+
Sbjct: 2582 YYCAGL 2587
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 IYVCAGMFI 9
++ CAG+ I
Sbjct: 100 VWACAGLEI 108
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 IYVCAGMFI 9
++ CAG+ I
Sbjct: 100 VWACAGLEI 108
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 IYVCAGMFI 9
++ CAG+ I
Sbjct: 100 VWACAGLEI 108
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 YVCAGMF 8
YVC G F
Sbjct: 1600 YVCDGSF 1606
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 YVCAGMF 8
YVC G F
Sbjct: 1580 YVCDGSF 1586
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 4 CAGMFIV 10
C+G F+V
Sbjct: 12 CSGWFLV 18
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 4 CAGMFIV 10
C+G F+V
Sbjct: 14 CSGWFLV 20
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 4 CAGMFIV 10
C+G F+V
Sbjct: 14 CSGWFLV 20
118|Sequence|586|595|GMFIVVSFAG
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GMFIVVSFAG 10
G+F V SFA
Sbjct: 160 GIFFVSSFAA 169
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 1 GMFIVVSFAG 10
G+F V SFA
Sbjct: 160 GIFFVSSFAA 169
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 MFIVVSFAG 10
+FIV +F G
Sbjct: 136 IFIVFAFGG 144
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 GMFIVVSFAG 10
+F+++SF G
Sbjct: 705 ALFLILSFIG 714
119|Sequence|591|600|VSFAGRLVVY
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 VSFAGRLVVY 10
VS++ L++Y
Sbjct: 896 VSYSSDLIIY 905
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 VSFAGRLVVY 10
VS++ L++Y
Sbjct: 880 VSYSSDLIIY 889
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 VSFAGRLVVY 10
VS++ L++Y
Sbjct: 887 VSYSSDLIIY 896
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 VSFAGRLVVY 10
VS++ L++Y
Sbjct: 883 VSYSSDLIIY 892
120|Sequence|596|605|RLVVYKIVYM
>sp|VB18_VACCC|ANKYRIN repeat protein B18|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 VVYKIVYM 10
++Y+I+YM
Sbjct: 551 IIYEILYM 558
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 3 VVYKIVYM 10
++Y+I+YM
Sbjct: 551 IIYEILYM 558
121|Sequence|601|610|KIVYMFLFLL
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 IVYMFLFLL 10
I+Y FLF++
Sbjct: 33 IIYRFLFVM 41
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 5 MFLFLL 10
MF+FLL
Sbjct: 1 MFIFLL 6
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 4 YMFLFLL 10
+M++FLL
Sbjct: 50 FMYMFLL 56
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 4 YMFLFLL 10
+M++FLL
Sbjct: 50 FMYMFLL 56
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 YMFLFLL 10
+M++FLL
Sbjct: 50 FMYMFLL 56
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 4 YMFLFLL 10
+M++FLL
Sbjct: 50 FMYMFLL 56
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 KIVYMFLFLL 10
K+VY F LL
Sbjct: 1965 KVVYTFRILL 1974
>sp|UL33_HHV7J|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 7 (strain JI)
Query: 1 KIVYMFLF 8
KIVY FL+
Sbjct: 210 KIVYCFLW 217
>sp|VP7_ROT41|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 IVYMFLFLL 10
++Y FLF++
Sbjct: 33 VIYRFLFVI 41
122|Sequence|606|615|FLFLLCLTLF
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LLCLTLF 10
LLCLTLF
Sbjct: 1138 LLCLTLF 1144
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LLCLTLF 10
LLCLTLF
Sbjct: 1138 LLCLTLF 1144
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LLCLTLF 10
LLCLTLF
Sbjct: 1138 LLCLTLF 1144
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LLCLTLF 10
LLCLTLF
Sbjct: 1138 LLCLTLF 1144
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 LLCLTLF 10
LLCLTLF
Sbjct: 1138 LLCLTLF 1144
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 5 LCLTLF 10
LCLTLF
Sbjct: 2345 LCLTLF 2350
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 5 LCLTLF 10
LCLTLF
Sbjct: 2372 LCLTLF 2377
>sp|UL92_EBVB9|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain B95-8)
Query: 1 FLFLLCLTLF 10
F+F CL LF
Sbjct: 154 FVFPCCLMLF 163
>sp|UL92_EBVA8|LATE gene expression regulator BDLF4|Epstein-Barr virus (strain AG876)
Query: 1 FLFLLCLTLF 10
F+F CL LF
Sbjct: 154 FVFPCCLMLF 163
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 FLFLLCLTL 9
F+FLL LTL
Sbjct: 2 FIFLLFLTL 10
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 FLFLLCL 7
FL+LLC
Sbjct: 232 FLYLLCF 238
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 1 FLFLLCLTL 9
+LFL+C+ L
Sbjct: 71 WLFLICVLL 79
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LCLTLF 10
LC+TLF
Sbjct: 618 LCITLF 623
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LCLTLF 10
LC+TLF
Sbjct: 618 LCITLF 623
>sp|YVAA_VACCC|UNCHARACTERIZED 14.1 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FLFLLCLTL 9
+LFL+C L
Sbjct: 102 YLFLICHNL 110
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 FLFLLCLT 8
F FLLC++
Sbjct: 608 FHFLLCVS 615
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 FLFLLCLT 8
F FLLC++
Sbjct: 608 FHFLLCVS 615
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FLLCLTLF 10
F+LCL L
Sbjct: 2991 FMLCLLLL 2998
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FLLCLTLF 10
F+LCL L
Sbjct: 2991 FMLCLLLL 2998
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FLLCLTLF 10
F+LCL L
Sbjct: 2991 FMLCLLLL 2998
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 FLLCLTLF 10
F+LCL L
Sbjct: 2991 FMLCLLLL 2998
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LLCLTLF 10
+ CLTLF
Sbjct: 4 MWCLTLF 10
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LLCLTLF 10
+ CLTLF
Sbjct: 4 MWCLTLF 10
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 FLFLLC 6
F FLLC
Sbjct: 1588 FTFLLC 1593
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 FLFLLC 6
F FLLC
Sbjct: 1588 FTFLLC 1593
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 FLFLLC 6
F FLLC
Sbjct: 1588 FTFLLC 1593
>sp|ITP_HHV7J|INNER tegument protein|Human herpesvirus 7 (strain JI)
Query: 1 FLFLLCLTLF 10
++F LC+ LF
Sbjct: 411 YIFFLCIELF 420
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 LFLLCLTL 9
LFLLC +
Sbjct: 229 LFLLCFKV 236
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 2 LFLLCLTL 9
LFLLC +
Sbjct: 230 LFLLCFKV 237
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 LFLLCLTL 9
LFLLC +
Sbjct: 231 LFLLCFKV 238
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 LFLLCL 7
LFLLC
Sbjct: 231 LFLLCF 236
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human
Query: 1 FLFLLCLTL 9
++FL+C+ L
Sbjct: 71 WMFLVCILL 79
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 FLFLLCL 7
F+F LC+
Sbjct: 401 FIFQLCI 407
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 FLFLLC 6
FLF LC
Sbjct: 1130 FLFALC 1135
123|Sequence|611|620|CLTLFQVYYS
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 LTLFQVYYS 10
L+LFQ Y+S
Sbjct: 1684 LSLFQDYFS 1692
>sp|A28_YLDV|ENVELOPE protein A28 homolog|Yaba-like disease virus (YLDV)
Query: 1 CLTLFQVYY 9
CL + QVYY
Sbjct: 17 CLIVIQVYY 25
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 3 TLFQVYY 9
TLFQ++Y
Sbjct: 146 TLFQIFY 152
>sp|NEC1_HCMVM|NUCLEAR egress protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LFQVYY 9
+FQ+YY
Sbjct: 174 IFQIYY 179
>sp|NEC1_HCMVA|NUCLEAR egress protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LFQVYY 9
+FQ+YY
Sbjct: 174 IFQIYY 179
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 FQVYY 9
FQVYY
Sbjct: 1393 FQVYY 1397
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 FQVYY 9
FQVYY
Sbjct: 1394 FQVYY 1398
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 FQVYY 9
FQVYY
Sbjct: 1392 FQVYY 1396
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 FQVYY 9
FQVYY
Sbjct: 1392 FQVYY 1396
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 5 FQVYY 9
FQVYY
Sbjct: 1393 FQVYY 1397
>sp|A28_YMTV5|ENVELOPE protein A28 homolog|Yaba monkey tumor virus (strain
Query: 1 CLTLFQVYY 9
CL + Q+YY
Sbjct: 17 CLIIMQIYY 25
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 1 CLTLFQVYY 9
C TLF+ ++
Sbjct: 692 CCTLFEKFF 700
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 1 CLTLFQVYY 9
C TLF+ ++
Sbjct: 692 CCTLFEKFF 700
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 3 TLFQVYY 9
T+FQ++Y
Sbjct: 149 TIFQIFY 155
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 3 TLFQVYY 9
T+FQ++Y
Sbjct: 149 TIFQIFY 155
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TLFQVYY 9
T+FQ++Y
Sbjct: 149 TIFQIFY 155
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CLTLFQVY 8
CL+L Q+Y
Sbjct: 28 CLSLRQLY 35
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 CLTLFQ 6
CL LFQ
Sbjct: 474 CLPLFQ 479
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 CLTLFQVYY 9
CL +FQ Y
Sbjct: 197 CLLVFQPVY 205
>sp|UL52_HCMVM|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CLTLFQVY 8
C+TLF+ +
Sbjct: 619 CITLFKAF 626
>sp|UL52_HCMVA|PACKAGING protein UL32 homolog|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLTLFQVY 8
C+TLF+ +
Sbjct: 619 CITLFKAF 626
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 CLTLFQVYY 9
CL LF YY
Sbjct: 243 CLMLFVPYY 251
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLTLFQVYY 9
CL LF YY
Sbjct: 243 CLMLFVPYY 251
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 TLFQVYYS 10
T+FQ Y++
Sbjct: 671 TIFQPYFA 678
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 1 CLTLFQVYY 9
CL L VY+
Sbjct: 241 CLVLHGVYF 249
>sp|GLYCP_NIPAV|GLYCOPROTEIN G|Nipah virus
Query: 1 CLTLFQVY 8
C++L ++Y
Sbjct: 574 CISLVEIY 581
>sp|GLYCP_HENDH|GLYCOPROTEIN G|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 CLTLFQVY 8
C++L ++Y
Sbjct: 574 CISLVEIY 581
124|Sequence|616|625|QVYYSLWRKL
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 3 YYSLWRKL 10
+Y++WR++
Sbjct: 186 FYTMWRQV 193
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 3 YYSLWRKL 10
+Y++WR++
Sbjct: 186 FYTMWRQV 193
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 YYSLWRKL 10
+Y++WR++
Sbjct: 187 FYAMWRQV 194
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YYSLWR 8
+Y+LWR
Sbjct: 154 FYALWR 159
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 3 YYSLWR 8
+Y+LWR
Sbjct: 223 FYALWR 228
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 YYSLWR 8
YYS WR
Sbjct: 6 YYSKWR 11
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 3 YYSLWR 8
YYS WR
Sbjct: 6 YYSKWR 11
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YYSLWR 8
+Y+LWR
Sbjct: 223 FYALWR 228
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 2 VYYSLWRKL 10
VYY+ W+ L
Sbjct: 641 VYYNSWQNL 649
Query: 1 QVYYSL 6
Q+YYSL
Sbjct: 424 QLYYSL 429
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 YSLWRK 9
+SLWR+
Sbjct: 515 FSLWRR 520
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 YSLWRK 9
+SLWR+
Sbjct: 513 FSLWRR 518
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 YSLWRK 9
+SLWR+
Sbjct: 515 FSLWRR 520
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 YYSLW 7
Y+SLW
Sbjct: 351 YFSLW 355
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 265 YFSMWNQ 271
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 276 YFSMWNQ 282
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 3 YYSLWRKL 10
Y+SL R+L
Sbjct: 220 YFSLQRRL 227
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 YYSLWRKL 10
Y+SL R+L
Sbjct: 220 YFSLQRRL 227
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YYSLWRKL 10
Y+SL R+L
Sbjct: 220 YFSLQRRL 227
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 3 YYSLWRKL 10
Y+SL R+L
Sbjct: 220 YFSLQRRL 227
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 272 YFSMWNQ 278
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 QVYYSL 6
Q+YYSL
Sbjct: 424 QLYYSL 429
Query: 3 YYSLWRKL 10
YY+ W+ L
Sbjct: 640 YYNNWQNL 647
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 QVYYSL 6
Q+YYSL
Sbjct: 424 QLYYSL 429
Query: 3 YYSLWRKL 10
YY+ W+ L
Sbjct: 640 YYNNWQNL 647
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 YYSLWR 8
YY WR
Sbjct: 6210 YYGCWR 6215
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YSLWRKL 10
YS++RK+
Sbjct: 680 YSMYRKI 686
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 YSLWRKL 10
YS++RK+
Sbjct: 680 YSMYRKI 686
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 YSLWRKL 10
YS++RK+
Sbjct: 680 YSMYRKI 686
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 376 YFSMWNQ 382
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYSLWRKL 10
Y+S WR L
Sbjct: 1163 YHSNWRAL 1170
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 YYSLWRKL 10
YY+ W+ L
Sbjct: 642 YYNSWQNL 649
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 YYSLWR 8
YY WR
Sbjct: 6180 YYGCWR 6185
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 QVYYSLW 7
VY SLW
Sbjct: 2174 HVYDSLW 2180
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 QVYYSLW 7
VY SLW
Sbjct: 2170 HVYDSLW 2176
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 YYSLWR 8
YY WR
Sbjct: 6160 YYGCWR 6165
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 YYSLWR 8
YY WR
Sbjct: 6122 YYGCWR 6127
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 366 YFSMWNQ 372
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 372 YFSMWNQ 378
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 QVYYSLW 7
Q Y+S+W
Sbjct: 147 QDYFSVW 153
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QVYYSLW 7
Q Y+S+W
Sbjct: 147 QDYFSVW 153
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 356 YFSMWNQ 362
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 395 YFSMWNQ 401
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 359 YFSMWNQ 365
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2495 VMYNLWK 2501
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 YYSLW 7
YY +W
Sbjct: 246 YYEMW 250
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 YYSLW 7
YY +W
Sbjct: 245 YYEMW 249
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 YYSLW 7
YY +W
Sbjct: 245 YYEMW 249
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2495 VMYNLWK 2501
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2495 VMYNLWK 2501
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2494 VMYNLWK 2500
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2494 VMYNLWK 2500
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2494 VMYNLWK 2500
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2494 VMYNLWK 2500
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2494 VMYNLWK 2500
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 YYSLW 7
YY +W
Sbjct: 245 YYEMW 249
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 YYSLWRK 9
Y+S+W +
Sbjct: 383 YFSMWNQ 389
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 3 YYSLW 7
Y+S+W
Sbjct: 371 YFSMW 375
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 3 YYSLW 7
Y+S+W
Sbjct: 300 YFSMW 304
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 YYSLW 7
YY LW
Sbjct: 42 YYLLW 46
>sp|NSS_HTRV|NON-STRUCTURAL protein NS-S|Heartland virus (HTRV)
Query: 1 QVYYSLWR 8
+Y+++WR
Sbjct: 216 SLYFAIWR 223
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYSLWRKL 10
Y+S WR +
Sbjct: 1166 YHSNWRAM 1173
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 3 YYSLW 7
Y+S+W
Sbjct: 255 YFSMW 259
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 VYYSLWR 8
V Y+LW+
Sbjct: 2494 VAYNLWK 2500
125|Sequence|621|630|LWRKLLKAFW
>sp|PORTL_HHV7J|PORTAL protein|Human herpesvirus 7 (strain JI)
Query: 2 WRKLLKAF 9
W++ LKAF
Sbjct: 113 WQRHLKAF 120
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 WRKLLKAFW 10
WRK + +W
Sbjct: 140 WRKESRGWW 148
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 WRKLLKAFW 10
WRK + +W
Sbjct: 140 WRKESRGWW 148
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 WRKLLKAFW 10
W + FW
Sbjct: 575 WNSFFRKFW 583
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 WRKLLKAF 9
W+K+ +AF
Sbjct: 1182 WKKIQQAF 1189
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 WRKLLKAFW 10
W+ + FW
Sbjct: 578 WKSFFERFW 586
>sp|HBZ_HTL1L|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 WRKLLKAFW 10
W++ L+A W
Sbjct: 198 WQRRLEAMW 206
>sp|VE1_HPV1|REPLICATION protein E1|Human papillomavirus type 1 (Human
Query: 2 WRKLLKAFW 10
W+ + FW
Sbjct: 572 WKSFFERFW 580
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 5 LLKAFW 10
LLK+FW
Sbjct: 58 LLKSFW 63
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 WRKLLK 7
W KLLK
Sbjct: 2176 WTKLLK 2181
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 LWRKLLKAFW 10
+W K K +W
Sbjct: 139 MWGKESKGWW 148
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 2 WRKLLKAF 9
W ++LK F
Sbjct: 47 WNEILKLF 54
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 2 WRKLLKAF 9
W ++LK F
Sbjct: 47 WNEILKLF 54
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LWRKLLKAFW 10
LW + FW
Sbjct: 767 LWNNNQQMFW 776
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LWRKLLKAFW 10
LW + FW
Sbjct: 767 LWNNNQQMFW 776
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LWRKLLKAFW 10
LW + FW
Sbjct: 766 LWNNNQQMFW 775
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LWRKLLKAFW 10
LW + FW
Sbjct: 767 LWNNNQQMFW 776
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 LWRKLLKAFW 10
LW + FW
Sbjct: 767 LWNNNQQMFW 776
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 WRKLLK 7
W+K+LK
Sbjct: 2070 WKKILK 2075
126|Sequence|626|635|LKAFWWLVVA
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 LKAFWWLV 8
+K FWW++
Sbjct: 429 IKPFWWIL 436
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 FWWL 7
FWWL
Sbjct: 304 FWWL 307
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LKAFWWLVVA 10
L +WWL++
Sbjct: 16 LSNYWWLLLG 25
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 LKAFWWLVVA 10
L +WWL++
Sbjct: 16 LSHYWWLLLG 25
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 3 AFWWLVVA 10
A WW+V A
Sbjct: 264 AIWWVVGA 271
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 LKAFWWLV 8
LKAFW +V
Sbjct: 59 LKAFWKVV 66
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 LKAFWWL 7
LK+F+W
Sbjct: 1854 LKSFFWF 1860
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LKAFWWL 7
LK+F+W
Sbjct: 1853 LKSFFWF 1859
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 LKAFWWL 7
LK+F+W
Sbjct: 1844 LKSFFWF 1850
>sp|E321_ADE1A|EARLY E3 20.2 kDa glycoprotein|Human adenovirus B serotype 11
Query: 4 FWWLV 8
FWW +
Sbjct: 42 FWWRI 46
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 4 FWWLV 8
FWW +
Sbjct: 42 FWWRI 46
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 LKAFWWLV 8
LKAFW +V
Sbjct: 59 LKAFWKVV 66
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 4 FWWLVVA 10
FW +VVA
Sbjct: 101 FWTVVVA 107
>sp|UL01_HCMVA|GLYCOPROTEIN UL1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KAFWW 6
KAF+W
Sbjct: 36 KAFYW 40
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 KAFWWL 7
++ WWL
Sbjct: 845 RSLWWL 850
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 LKAFWWL 7
LK F+W
Sbjct: 1856 LKTFFWF 1862
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 4 FWWLV 8
FWW +
Sbjct: 42 FWWRI 46
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 KAFWWLVVA 10
+ +WW V A
Sbjct: 256 RRWWWAVRA 264
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 KAFWWLVVA 10
+ +WW V A
Sbjct: 256 RRWWWAVRA 264
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 3 AFWWL 7
A WWL
Sbjct: 411 ATWWL 415
>sp|CEP1_HHV2H|CYTOPLASMIC envelopment protein 1|Human herpesvirus 2 (strain HG52)
Query: 4 FWWL 7
+WWL
Sbjct: 277 YWWL 280
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 AFWWL 7
+WWL
Sbjct: 11 GWWWL 15
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 AFWWL 7
+WWL
Sbjct: 11 GWWWL 15
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 LKAFW 5
LKAFW
Sbjct: 59 LKAFW 63
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 KAFWWL 7
++ WWL
Sbjct: 845 RSVWWL 850
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LKAFW 5
LKAFW
Sbjct: 59 LKAFW 63
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LKAFW 5
LKAFW
Sbjct: 59 LKAFW 63
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 KAFWWL 7
++ WWL
Sbjct: 845 RSVWWL 850
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 LKAFW 5
LKAFW
Sbjct: 59 LKAFW 63
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KAFWWL 7
+ WWL
Sbjct: 841 RGIWWL 846
>sp|CEP1_HHV11|CYTOPLASMIC envelopment protein 1|Human herpesvirus 1 (strain 17)
Query: 4 FWWL 7
+WWL
Sbjct: 277 YWWL 280
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 KAFWWL 7
+ WWL
Sbjct: 841 RGIWWL 846
>sp|GO_HCMVA|GLYCOPROTEIN O|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FWWL 7
+WWL
Sbjct: 462 WWWL 465
127|Sequence|631|640|WLVVAYTMLV
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 1 WLVVAY 6
WL+VAY
Sbjct: 193 WLIVAY 198
>sp|C_HENDH|PROTEIN C|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 WLVVAYTMLV 10
WL YTM++
Sbjct: 103 WLQTLYTMIM 112
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 3 VVAYTM 8
+VAYTM
Sbjct: 674 IVAYTM 679
>sp|VP3_ROTHC|PROTEIN VP3|Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989)
Query: 1 WLVVAYTML 9
WL ++Y +L
Sbjct: 369 WLEISYKLL 377
>sp|E4RF4_ADE02|EARLY 4 ORF4 protein|Human adenovirus C serotype 2
Query: 1 WLVVAYTMLV 10
WL VAY+ +V
Sbjct: 21 WLGVAYSAVV 30
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 1 WLVVAYTMLV 10
W++ +TM++
Sbjct: 9 WILWTFTMVI 18
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 WLVVAYTM 8
WL + Y M
Sbjct: 182 WLTIKYQM 189
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 WLVVAYTM 8
WL++ Y M
Sbjct: 182 WLMIKYRM 189
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 WLVVAYTM 8
WL++ Y M
Sbjct: 182 WLMIKYRM 189
>sp|C_NIPAV|PROTEIN C|Nipah virus
Query: 1 WLVVAYTMLV 10
WL YTM++
Sbjct: 103 WLQTLYTMIM 112
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 WLVVAYTM 8
WL++ Y M
Sbjct: 182 WLMIKYRM 189
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 WLVVAYTM 8
W+V AY +
Sbjct: 194 WVVAAYAV 201
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WLVVAYTMLV 10
W+ +AY + +
Sbjct: 3139 WITIAYIICI 3148
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 WLVVAYTM 8
W+V AY +
Sbjct: 204 WVVAAYYL 211
128|Sequence|636|645|YTMLVLIAVY
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 YTMLVLIAVY 10
+ +L+LI+VY
Sbjct: 9 FILLLLISVY 18
129|Sequence|641|650|LIAVYTFQFQ
***** No hits found ******
130|Sequence|646|655|TFQFQDFPAY
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 1 TFQFQDFPAY 10
+FQ Q PAY
Sbjct: 508 SFQHQYIPAY 517
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 5 QDFPAY 10
QDFP Y
Sbjct: 1002 QDFPPY 1007
>sp|NTP1_MCV1|NUCLEOSIDE triphosphatase I|Molluscum contagiosum virus subtype 1
Query: 1 TFQFQDFP 8
TF F +FP
Sbjct: 294 TFAFDEFP 301
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 5 QDFPAY 10
QDFP Y
Sbjct: 1002 QDFPPY 1007
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 5 QDFPAY 10
QDFP Y
Sbjct: 993 QDFPRY 998
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 5 QDFPAY 10
QDFP Y
Sbjct: 1002 QDFPPY 1007
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 5 QDFPAY 10
QDFP Y
Sbjct: 1003 QDFPPY 1008
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 5 QDFPAY 10
QDFP Y
Sbjct: 1003 QDFPPY 1008
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 5 QDFPAY 10
QDFPA+
Sbjct: 119 QDFPAW 124
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 TFQFQDFP 8
TF+ +D P
Sbjct: 337 TFELEDLP 344
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TFQFQDFP 8
TF F FP
Sbjct: 295 TFTFDSFP 302
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 TFQFQDFP 8
TF F FP
Sbjct: 295 TFTFDSFP 302
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 TFQFQDFP 8
TF F FP
Sbjct: 295 TFTFDSFP 302
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 TFQFQDFP 8
TF F FP
Sbjct: 295 TFTFDSFP 302
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TFQFQDFP 8
TF F FP
Sbjct: 295 TFTFDSFP 302
>sp|NTP1_YMTV5|NUCLEOSIDE triphosphatase I|Yaba monkey tumor virus (strain
Query: 1 TFQFQDFP 8
TF F FP
Sbjct: 295 TFSFDSFP 302
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 4 FQDFPAY 10
F DFP +
Sbjct: 270 FSDFPEF 276
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 5 QDFPAY 10
+DFP Y
Sbjct: 19 EDFPLY 24
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 FQFQDFPAY 10
FQF P Y
Sbjct: 279 FQFATLPVY 287
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 TFQFQDFPAY 10
TF F + PA+
Sbjct: 3097 TFYFTNEPAF 3106
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 FQFQDFP 8
F FQ FP
Sbjct: 362 FDFQVFP 368
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TFQFQDFPAY 10
TF F + PA+
Sbjct: 3097 TFYFTNEPAF 3106
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 3 QFQDFPA 9
+ QDFP+
Sbjct: 226 ELQDFPS 232
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 3 QFQDFPA 9
+ QDFP+
Sbjct: 226 ELQDFPS 232
131|Sequence|651|660|DFPAYWRNLT
>sp|CVC1_HHV8P|CAPSID vertex component 1|Human herpesvirus 8 type P
Query: 1 DFPAYWRNLT 10
D PA WR+ T
Sbjct: 232 DVPATWRDAT 241
>sp|KITH_VZVD|THYMIDINE kinase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 AYWRNL 9
+YWRNL
Sbjct: 51 SYWRNL 56
>sp|KITH_VZVO|THYMIDINE kinase|Varicella-zoster virus (strain Oka vaccine)
Query: 4 AYWRNL 9
+YWRNL
Sbjct: 51 SYWRNL 56
>sp|E3B14_ADE07|EARLY E3B 14.9 kDa protein|Human adenovirus B serotype 7
Query: 1 DFPAYW 6
DFP YW
Sbjct: 50 DFPTYW 55
>sp|E3B14_ADE03|EARLY E3B 14.5 kDa protein|Human adenovirus B serotype 3
Query: 1 DFPAYW 6
DFP YW
Sbjct: 50 DFPTYW 55
>sp|ICP27_HHV6U|MRNA export factor ICP27 homolog|Human herpesvirus 6A (strain
Query: 1 DFPAYWRNLT 10
+FP +RNL+
Sbjct: 375 NFPEEYRNLS 384
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 PAYWR 7
PA+WR
Sbjct: 2941 PAFWR 2945
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 4 AYWRNL 9
+YW+NL
Sbjct: 245 SYWKNL 250
>sp|PG209_MONPV|PROTEIN OPG209|Monkeypox virus (MPXV)
Query: 2 FPAYWRN 8
PAY+RN
Sbjct: 180 LPAYYRN 186
>sp|VP3_ROTB2|PROTEIN VP3|Rotavirus X (isolate
Query: 2 FPAYWRNL 9
+P+YW L
Sbjct: 308 YPSYWLEL 315
>sp|VP3_ROTJ1|PROTEIN VP3|Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV
Query: 2 FPAYWRNL 9
+P+YW L
Sbjct: 308 YPSYWLEL 315
>sp|P12I_HTL1A|ACCESSORY protein p12I|Human T-cell leukemia virus 1
Query: 2 FPAYWRNL 9
FPA WR L
Sbjct: 78 FPARWRFL 85
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PAYWR 7
P+YW+
Sbjct: 485 PSYWQ 489
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 2 FPAYWR 7
FPA WR
Sbjct: 896 FPAPWR 901
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 255 FPHQWINL 262
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 255 FPHQWINL 262
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 255 FPHQWINL 262
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 254 FPHQWINL 261
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 254 FPHQWINL 261
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 254 FPHQWINL 261
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 257 FPHQWINL 264
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 256 FPHQWINL 263
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 256 FPHQWINL 263
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 254 FPHQWINL 261
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 254 FPHQWINL 261
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 256 FPHQWINL 263
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 2 FPAYWRNL 9
FPA W ++
Sbjct: 1903 FPARWHHV 1910
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 FPAYWR 7
FP WR
Sbjct: 788 FPTAWR 793
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 FPAYWR 7
FP WR
Sbjct: 788 FPTAWR 793
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 FPAYWRNL 9
FP W NL
Sbjct: 255 FPHQWINL 262
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DFPAYWR 7
++P+ WR
Sbjct: 6 NYPSLWR 12
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DFPAYWR 7
++P+ WR
Sbjct: 6 NYPSLWR 12
>sp|P12I_HTL1C|ACCESSORY protein p12I|Human T-cell leukemia virus 1
Query: 2 FPAYWR 7
FPA WR
Sbjct: 78 FPARWR 83
132|Sequence|656|665|WRNLTGFTDE
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 555 WMNSTGFT 562
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNSTGFT 563
Query: 2 RNLTGFTD 9
RNL FT+
Sbjct: 2776 RNLRAFTE 2783
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 555 WMNSTGFT 562
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNSTGFT 563
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 555 WMNSTGFT 562
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNGTGFT 563
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNGTGFT 561
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNGTGFT 563
Query: 2 RNLTGFTD 9
RNL FT+
Sbjct: 2776 RNLRAFTE 2783
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNGTGFT 563
Query: 2 RNLTGFTD 9
RNL FT+
Sbjct: 2776 RNLRAFTE 2783
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNSTGFT 563
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 554 WMNSTGFT 561
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 WRNLTGFT 8
W N TGFT
Sbjct: 556 WMNGTGFT 563
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 RNLTGFTDE 10
R+ GFTDE
Sbjct: 1049 RSRLGFTDE 1057
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 WRNLTGFT 8
W N TG+T
Sbjct: 555 WMNSTGYT 562
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 WRNLTGFT 8
W N TG+T
Sbjct: 556 WMNSTGYT 563
Query: 2 RNLTGFTD 9
RNL FT+
Sbjct: 2776 RNLRAFTE 2783
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 WRNLTGFT 8
W N +GFT
Sbjct: 554 WMNSSGFT 561
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 TGFTDE 10
TGFTD+
Sbjct: 1016 TGFTDQ 1021
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 WRNLTGF 7
W N TGF
Sbjct: 555 WMNSTGF 561
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 WRNLTGF 7
W N TGF
Sbjct: 555 WMNSTGF 561
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 WRNLTGF 7
W N TGF
Sbjct: 555 WMNSTGF 561
>sp|PG089_VARV|PUTATIVE nuclease OPG089|Variola virus
Query: 2 RNLTGFTDE 10
+N+TGF +E
Sbjct: 111 QNVTGFMEE 119
>sp|PG089_VAR67|PUTATIVE nuclease OPG089|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 RNLTGFTDE 10
+N+TGF +E
Sbjct: 111 QNVTGFMEE 119
>sp|PG089_MONPV|PUTATIVE nuclease OPG089|Monkeypox virus (MPXV)
Query: 2 RNLTGFTDE 10
+N+TGF +E
Sbjct: 111 QNVTGFMEE 119
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 WRNLTGF 7
W N TGF
Sbjct: 554 WMNSTGF 560
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 WRNLTGF 7
W N TGF
Sbjct: 556 WMNSTGF 562
>sp|PG089_VACCC|PUTATIVE nuclease OPG089|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RNLTGFTDE 10
+N+TGF +E
Sbjct: 111 QNVTGFMEE 119
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 WRNLTGF 7
W N TGF
Sbjct: 555 WMNSTGF 561
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 4 LTGFTDE 10
+ GFTDE
Sbjct: 225 MCGFTDE 231
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 WRNLTGFTD 9
W NL F D
Sbjct: 636 WYNLLKFAD 644
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 WRNLTGFTD 9
W N G+TD
Sbjct: 3186 WENSRGWTD 3194
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 1 WRNLTGFTD 9
W NL F D
Sbjct: 636 WYNLLRFAD 644
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 WRNLTGF 7
W N +GF
Sbjct: 554 WMNTSGF 560
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 WRNLTGFTDE 10
W+ TG TDE
Sbjct: 2420 WQR-TGLTDE 2428
>sp|PG040_VACCA|SUPERINFECTION exclusion protein|Vaccinia virus (strain Ankara) (VACV)
Query: 3 NLTGFTD 9
N+T FTD
Sbjct: 238 NMTHFTD 244
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 WRNLTGFTD 9
+RN TG D
Sbjct: 1337 FRNTTGLLD 1345
>sp|PG040_VAR67|SUPERINFECTION exclusion protein|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 NLTGFTD 9
N+T FTD
Sbjct: 242 NMTHFTD 248
>sp|PG040_VACCC|SUPERINFECTION exclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NLTGFTD 9
N+T FTD
Sbjct: 238 NMTHFTD 244
>sp|PG040_MONPV|SUPERINFECTION exclusion protein|Monkeypox virus (MPXV)
Query: 3 NLTGFTD 9
N+T FTD
Sbjct: 244 NMTHFTD 250
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 WRNLTGF 7
W N +GF
Sbjct: 554 WMNSSGF 560
133|Sequence|661|670|GFTDEQLGDL
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I30A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQKLGD 29
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I18A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Brevig
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I80A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I78A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I59A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I02A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Guinea
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I78A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Mallard/New
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I85A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I02A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I00A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Duck/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I02A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I02A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I05A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 18 FADQELGD 25
>sp|NS1_I02A7|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 5 FADQELGD 12
>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41
Query: 1 GFTDEQL 7
GF+DE+L
Sbjct: 74 GFSDERL 80
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 1 GFTDEQL 7
GF+DE+L
Sbjct: 74 GFSDERL 80
>sp|NS1_I01A2|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I01A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Silky
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 FTDEQLGDL 10
+ DE+LG+L
Sbjct: 109 YADEKLGEL 117
>sp|NS1_I02A6|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I02A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I01A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I03A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I03A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 2 FTDEQLGD 9
F D++LGD
Sbjct: 22 FADQELGD 29
>sp|NS1_I61A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 FTDEQLGD 9
F D +LGD
Sbjct: 22 FADNELGD 29
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 GFTDEQL 7
GF+DE+L
Sbjct: 80 GFSDERL 86
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 GFTDEQ 6
GFTDE+
Sbjct: 227 GFTDER 232
>sp|NS1_I02A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 FTDEQLGD 9
F D+++GD
Sbjct: 22 FADQEMGD 29
>sp|NS1_I56A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 FTDEQLGD 9
F D+++GD
Sbjct: 22 FADQKMGD 29
>sp|NS1_I01A3|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 FTDEQLGD 9
F D +LGD
Sbjct: 22 FADRELGD 29
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 TDEQLG 8
TDE+LG
Sbjct: 211 TDEELG 216
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 TDEQLG 8
TDE+LG
Sbjct: 210 TDEELG 215
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 GFTDEQL 7
GFT E+L
Sbjct: 155 GFTPEEL 161
>sp|NS1_I24A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Japan/1924
Query: 2 FTDEQLGD 9
F D +LGD
Sbjct: 19 FADLELGD 26
134|Sequence|666|675|QLGDLGLEQF
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 QLGDLGLEQF 10
QLG GLE F
Sbjct: 443 QLGQYGLEIF 452
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 QLGDLGLEQF 10
QLG GLE F
Sbjct: 442 QLGQYGLEIF 451
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 QLGDLGLEQF 10
Q GD+ +QF
Sbjct: 522 QFGDIDFDQF 531
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 QLGDLGLEQF 10
Q GD+ +QF
Sbjct: 1853 QFGDIDFDQF 1862
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 LGDLGLEQF 10
LGD LE+F
Sbjct: 950 LGDRSLEKF 958
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 QLGDLGLEQF 10
+L D GL+QF
Sbjct: 240 ELIDAGLKQF 249
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QLGDLGLEQF 10
+L D GL+QF
Sbjct: 240 ELIDAGLKQF 249
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 LGDLGLEQF 10
LGD LE F
Sbjct: 949 LGDRSLESF 957
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GDLGLE 8
GDLG+E
Sbjct: 544 GDLGIE 549
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GDLGLE 8
GDLG+E
Sbjct: 544 GDLGIE 549
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QLGDLGLEQ 9
QLG+LG Q
Sbjct: 410 QLGNLGYLQ 418
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 LGDLGLEQF 10
LGD+ +QF
Sbjct: 94 LGDISNQQF 102
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 2 LGDLGLE 8
LGD GLE
Sbjct: 110 LGDDGLE 116
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 2 LGDLGLE 8
LGD GLE
Sbjct: 110 LGDDGLE 116
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 QLGDLG 6
+LGDLG
Sbjct: 153 RLGDLG 158
135|Sequence|671|680|GLEQFSVSEL
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LEQFSVSEL 10
L FSVSEL
Sbjct: 105 LRNFSVSEL 113
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 1 GLEQFSVSEL 10
++ FSVSEL
Sbjct: 104 SVQNFSVSEL 113
>sp|VE1_HPV28|REPLICATION protein E1|Human papillomavirus 28
Query: 4 QFSVSEL 10
QFS+SE+
Sbjct: 367 QFSLSEM 373
>sp|VE1_HPV03|REPLICATION protein E1|Human papillomavirus 3
Query: 4 QFSVSEL 10
QFS+SE+
Sbjct: 364 QFSLSEM 370
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 4 QFSVSEL 10
QFS+SE+
Sbjct: 386 QFSLSEM 392
136|Sequence|676|685|SVSELFSSIL
***** No hits found ******
137|Sequence|681|690|FSSILVPGFF
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 LVPGFF 10
L+PGFF
Sbjct: 1123 LIPGFF 1128
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 2 SSILVPGFF 10
S L+PGFF
Sbjct: 797 SDNLIPGFF 805
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 FSSILVPG 8
F+S+L PG
Sbjct: 398 FASLLTPG 405
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 FSSILVPGFF 10
F+ L+PG F
Sbjct: 721 FNRTLLPGIF 730
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 FSSILVPG 8
F+S L PG
Sbjct: 399 FASFLAPG 406
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 FSSILVPGF 9
SS+++P F
Sbjct: 236 LSSVIIPDF 244
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FSSILVPGF 9
SS+++P F
Sbjct: 236 LSSVIIPDF 244
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 FSSILVPGFF 10
F + L+PG F
Sbjct: 730 FDARLLPGVF 739
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 FSSILVPGFF 10
F + L+PG F
Sbjct: 730 FDARLLPGVF 739
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 SSILVPG 8
SSIL PG
Sbjct: 267 SSILSPG 273
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 SSILVPG 8
SSIL PG
Sbjct: 267 SSILSPG 273
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 FSSILVPGFF 10
F L+PG F
Sbjct: 654 FDKDLLPGIF 663
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 5 LVPGFF 10
L PGFF
Sbjct: 761 LAPGFF 766
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FSSILVPG 8
FS++ VPG
Sbjct: 568 FSTVEVPG 575
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 SSILVPGF 9
S+ L+PGF
Sbjct: 715 STGLIPGF 722
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 SSILVPGF 9
S+ L+PGF
Sbjct: 715 STGLIPGF 722
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 SSILVPGF 9
S+ L+PGF
Sbjct: 715 STGLIPGF 722
>sp|YVCD_VACCC|UNCHARACTERIZED 7.9 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FSSILVP 7
FS+IL+P
Sbjct: 27 FSTILIP 33
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 SILVPGFF 10
S+L GFF
Sbjct: 93 SVLFQGFF 100
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 SSILVPGF 9
S+ L+PGF
Sbjct: 715 STGLIPGF 722
138|Sequence|686|695|VPGFFLLACI
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGFFLL C
Sbjct: 230 PGFFLLRC 237
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 221 PGFVLLRC 228
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 PGFFLLACI 10
PG FL C+
Sbjct: 608 PGLFLTTCL 616
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 PGFFLLACI 10
PG FL C+
Sbjct: 608 PGLFLTTCL 616
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 224 PGFALLRC 231
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 224 PGFALLRC 231
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 220 PGFALLRC 227
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 229 PGFALLRC 236
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 219 PGFALLRC 226
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF LL C
Sbjct: 230 PGFALLRC 237
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PGF +L C
Sbjct: 229 PGFAILRC 236
>sp|GN_HHV8P|ENVELOPE glycoprotein N|Human herpesvirus 8 type P
Query: 1 VPGFFLLAC 9
PGF+ +AC
Sbjct: 55 TPGFYDVAC 63
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VPGFFLL 7
+PGFF++
Sbjct: 1124 IPGFFIV 1130
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PG+ LL C
Sbjct: 229 PGYALLRC 236
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PG+ LL C
Sbjct: 230 PGYALLRC 237
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PG+ LL C
Sbjct: 221 PGYALLRC 228
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 VPGFFLL 7
+PGFF++
Sbjct: 801 IPGFFIV 807
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 GFFLLAC 9
GF LL C
Sbjct: 2360 GFLLLGC 2366
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFFLLA 8
PGF LLA
Sbjct: 244 PGFALLA 250
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFFLLA 8
PGF LLA
Sbjct: 244 PGFALLA 250
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFFLLA 8
PGF LLA
Sbjct: 244 PGFALLA 250
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFFLLA 8
PGF LLA
Sbjct: 244 PGFALLA 250
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 PGFFLLA 8
PGF LLA
Sbjct: 244 PGFALLA 250
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 VPGFFLLACI 10
+P F L++CI
Sbjct: 4 LPRFILVSCI 13
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 GFFLLACI 10
GF LL+C+
Sbjct: 42 GFKLLSCL 49
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 FFLLACI 10
+FL ACI
Sbjct: 1424 YFLSACI 1430
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 PGFFLLACI 10
PG F +CI
Sbjct: 100 PGIFENSCI 108
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 426 GYFLLA 431
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 430 GYFLLA 435
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 VPGFFLLAC 9
VPG L+C
Sbjct: 2011 VPGIPFLSC 2019
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 PGFFLLACI 10
PG F +C+
Sbjct: 100 PGIFETSCL 108
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 430 GYFLLA 435
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 426 GYFLLA 431
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 426 GYFLLA 431
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GFFLLACI 10
G F L C+
Sbjct: 81 GLFCLGCV 88
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GFFLLACI 10
G F L C+
Sbjct: 81 GLFCLGCV 88
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 PGFFLLAC 9
PG LL C
Sbjct: 222 PGLCLLRC 229
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 431 GYFLLA 436
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 431 GYFLLA 436
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 431 GYFLLA 436
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 431 GYFLLA 436
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 GFFLLAC 9
GF +LAC
Sbjct: 3075 GFNILAC 3081
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 3 GFFLLACI 10
FF+L C+
Sbjct: 468 AFFILICL 475
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 2 PGFFLL 7
PGFF++
Sbjct: 763 PGFFIV 768
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 GFFLLA 8
G+FLLA
Sbjct: 417 GYFLLA 422
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 GFFLLAC 9
GF +LAC
Sbjct: 3075 GFNILAC 3081
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 FFLLAC 9
FF+L C
Sbjct: 1315 FFILCC 1320
139|Sequence|691|700|LLACILQLHY
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLACILQLH 9
L AC+L+LH
Sbjct: 767 LRACLLKLH 775
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLACILQLH 9
L AC+L+LH
Sbjct: 767 LRACLLKLH 775
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LACILQLH 9
+ACI +LH
Sbjct: 168 MACIKELH 175
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LACILQLH 9
+ACI +LH
Sbjct: 168 MACIKELH 175
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LACILQLH 9
+ACI +LH
Sbjct: 168 MACIKELH 175
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LACILQLH 9
AC+L+LH
Sbjct: 222 FACVLKLH 229
>sp|LF1_EBVG|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 ACILQLH 9
+CI Q+H
Sbjct: 85 SCIFQVH 91
>sp|LF1_EBVB9|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 ACILQLH 9
+CI Q+H
Sbjct: 85 SCIFQVH 91
>sp|LF1_EBVA8|UNCHARACTERIZED LF1 protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 ACILQLH 9
+CI Q+H
Sbjct: 85 SCIFQVH 91
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CILQLHY 10
CIL HY
Sbjct: 89 CILANHY 95
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CILQLHY 10
CIL HY
Sbjct: 89 CILANHY 95
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 2 LACILQLH 9
+C+L+LH
Sbjct: 222 FSCVLKLH 229
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LACILQLH 9
+C+L+LH
Sbjct: 222 FSCVLKLH 229
140|Sequence|696|705|LQLHYFHRPF
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 QLHYFHR 8
QL YFHR
Sbjct: 3255 QLMYFHR 3261
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 QLHYFHR 8
QL YFHR
Sbjct: 3254 QLMYFHR 3260
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 QLHYFHR 8
QL YFHR
Sbjct: 3255 QLMYFHR 3261
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 LHYFHR 8
+HY+HR
Sbjct: 676 IHYYHR 681
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 2 QLHYFH 7
Q+HY+H
Sbjct: 316 QVHYYH 321
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 2 QLHYFH 7
Q+HY+H
Sbjct: 316 QVHYYH 321
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 2 QLHYFH 7
Q+HY+H
Sbjct: 316 QVHYYH 321
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 4 HYFHR 8
HY+HR
Sbjct: 686 HYYHR 690
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 LHYFHR 8
L+YFHR
Sbjct: 3277 LNYFHR 3282
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 4 HYFHR 8
HY+HR
Sbjct: 686 HYYHR 690
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 4 HYFHR 8
HY+HR
Sbjct: 686 HYYHR 690
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 3 LHYFHR 8
+HY+HR
Sbjct: 690 VHYYHR 695
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 QLHYFHR 8
+L YFHR
Sbjct: 3291 KLMYFHR 3297
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 HYFHR 8
HY+HR
Sbjct: 692 HYYHR 696
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 HYFHR 8
HY+HR
Sbjct: 692 HYYHR 696
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 HYFHR 8
HY+HR
Sbjct: 692 HYYHR 696
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 HYFHR 8
HY+HR
Sbjct: 692 HYYHR 696
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LHYFHRPF 10
L YF+RP
Sbjct: 1997 LTYFNRPL 2004
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LHYFHRPF 10
L YF+RP
Sbjct: 1997 LTYFNRPL 2004
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3276 LSYFHR 3281
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3274 LSYFHR 3279
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3276 LSYFHR 3281
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3276 LSYFHR 3281
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3276 LSYFHR 3281
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3276 LSYFHR 3281
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3276 LSYFHR 3281
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3278 LSYFHR 3283
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3278 LSYFHR 3283
>sp|NEC2_HHV11|NUCLEAR egress protein 2|Human herpesvirus 1 (strain 17)
Query: 5 YFHRP 9
+FHRP
Sbjct: 99 FFHRP 103
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 1 LQLHYFHRPF 10
LQL F PF
Sbjct: 615 LQLFTFKNPF 624
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 QLHYFHRP 9
++H F+RP
Sbjct: 428 KVHSFYRP 435
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 QLHYFHRP 9
++H F+RP
Sbjct: 428 KVHSFYRP 435
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 4 HYFHR 8
HY+HR
Sbjct: 691 HYYHR 695
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3267 LMYFHR 3272
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3289 LMYFHR 3294
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3293 LMYFHR 3298
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3289 LMYFHR 3294
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3287 LMYFHR 3292
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3252 LMYFHR 3257
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3252 LMYFHR 3257
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3252 LMYFHR 3257
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3252 LMYFHR 3257
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3252 LMYFHR 3257
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3254 LMYFHR 3259
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3254 LMYFHR 3259
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3254 LMYFHR 3259
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3254 LMYFHR 3259
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3254 LMYFHR 3259
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3255 LMYFHR 3260
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3252 LMYFHR 3257
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3255 LMYFHR 3260
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3255 LMYFHR 3260
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3255 LMYFHR 3260
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3255 LMYFHR 3260
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3255 LMYFHR 3260
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 LHYFHR 8
L YFHR
Sbjct: 3256 LMYFHR 3261
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka
Query: 4 HYFHRP 9
H+F+RP
Sbjct: 8 HFFYRP 13
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 4 HYFHRP 9
H+F+RP
Sbjct: 8 HFFYRP 13
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 LQLHYFHR 8
LQL Y H+
Sbjct: 1095 LQLSYVHK 1102
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 LHYFHRPF 10
LH+ H P+
Sbjct: 7 LHHRHHPY 14
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 3 LHYFHRPF 10
LH+ H P+
Sbjct: 7 LHHRHHPY 14
>sp|VP2_ROTJ1|INNER capsid protein VP2|Rotavirus X (strain
Query: 1 LQLHYFHRPF 10
LQL++F + +
Sbjct: 218 LQLYFFDKAY 227
>sp|VP2_ROTB2|INNER capsid protein VP2|Rotavirus X (isolate
Query: 1 LQLHYFHRPF 10
LQL++F + +
Sbjct: 218 LQLYFFDKAY 227
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 YFHRPF 10
Y+HRP
Sbjct: 653 YYHRPL 658
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 5 YFHRPF 10
Y+HRP
Sbjct: 653 YYHRPL 658
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 5 YFHRPF 10
Y+HRP
Sbjct: 653 YYHRPL 658
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 5 YFHRPF 10
Y+HRP
Sbjct: 653 YYHRPL 658
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 5 YFHRPF 10
Y+HRP
Sbjct: 653 YYHRPL 658
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 5 YFHRPF 10
Y+HRP
Sbjct: 653 YYHRPL 658
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 5 YFHRPF 10
YF++PF
Sbjct: 553 YFNKPF 558
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 4 HYFHR 8
HYF+R
Sbjct: 258 HYFNR 262
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 4 HYFHR 8
HYF+R
Sbjct: 266 HYFNR 270
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 4 HYFHR 8
HYF+R
Sbjct: 293 HYFNR 297
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 LHYFHRP 9
++YF RP
Sbjct: 1196 INYFRRP 1202
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 HYFHRP 9
H+ H+P
Sbjct: 762 HFLHQP 767
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 QLHYFH 7
Q+HYF+
Sbjct: 270 QVHYFN 275
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 HYFHRP 9
H+ H+P
Sbjct: 771 HFLHQP 776
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 LHYFHRP 9
++YF RP
Sbjct: 1196 VNYFRRP 1202
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 LQLHYF 6
LQLH+F
Sbjct: 127 LQLHFF 132
141|Sequence|701|710|FHRPFMQLTD
>sp|VE1_HPV09|REPLICATION protein E1|Human papillomavirus 9
Query: 2 HRPFMQLTD 10
H+P +LTD
Sbjct: 554 HKPQFELTD 562
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 HRPFMQL 8
H+P +QL
Sbjct: 544 HKPLLQL 550
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 FHRPFMQLTD 10
+HR + LTD
Sbjct: 1340 YHRAHIHLTD 1349
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 FHRPFMQLTD 10
++P ++LTD
Sbjct: 182 LYKPLLKLTD 191
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 HRPFMQ 7
HRPF +
Sbjct: 861 HRPFQE 866
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 HRPFMQ 7
HRPF +
Sbjct: 861 HRPFQE 866
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 HRPFMQ 7
HRPF +
Sbjct: 861 HRPFQE 866
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FHRPFMQLTD 10
++P ++LTD
Sbjct: 182 LYKPLLKLTD 191
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FHRPFMQLTD 10
++P ++LTD
Sbjct: 182 LYKPLLKLTD 191
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 1 FHRPFMQLTD 10
++P ++LTD
Sbjct: 182 LYKPLLKLTD 191
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 FHRPF 5
+HRPF
Sbjct: 404 YHRPF 408
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FHRPF 5
+HRPF
Sbjct: 404 YHRPF 408
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 FHRPFMQLTD 10
F RPF D
Sbjct: 649 FERPFKSALD 658
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 FHRPFMQLTD 10
F RPF D
Sbjct: 648 FERPFKSALD 657
142|Sequence|706|715|MQLTDMEHVS
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 QLTDMEHVS 10
+LT +EH+S
Sbjct: 1049 ELTSLEHLS 1057
143|Sequence|711|720|MEHVSLPGTR
>sp|K81_HHV8P|PROTEIN K8.1|Human herpesvirus 8 type P
Query: 1 MEHVSLPGTR 10
+E VSL GTR
Sbjct: 64 LEAVSLNGTR 73
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 5 SLPGTR 10
S+PGTR
Sbjct: 2855 SMPGTR 2860
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 EHVSLPGTR 10
EH +PG R
Sbjct: 529 EHRDVPGPR 537
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 EHVSLPGTR 10
EH +PG R
Sbjct: 529 EHRDVPGPR 537
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 286 MENISLEG 293
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 281 MENISLEG 288
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 281 MENISLEG 288
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 281 MENISLEG 288
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 281 MENISLEG 288
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 281 MENISLEG 288
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 1 MEHVSLPG 8
ME++SL G
Sbjct: 281 MENISLEG 288
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 MEHVSLP 7
++HV+LP
Sbjct: 136 IDHVNLP 142
>sp|VP16_HHV2H|TEGUMENT protein VP16|Human herpesvirus 2 (strain HG52)
Query: 2 EHVSLPGTR 10
EH++LP R
Sbjct: 298 EHLNLPLVR 306
>sp|VP16_HHV23|TEGUMENT protein VP16|Human herpesvirus 2 (strain 333)
Query: 2 EHVSLPGTR 10
EH++LP R
Sbjct: 298 EHLNLPLVR 306
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 2 EHVSLPGTR 10
EH++LP R
Sbjct: 300 EHLNLPLVR 308
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EHVSLPG 8
EH LPG
Sbjct: 405 EHPHLPG 411
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EHVSLPG 8
EH LPG
Sbjct: 405 EHPHLPG 411
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EHVSLPG 8
EH LPG
Sbjct: 405 EHPHLPG 411
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 2 EHVSLPGTR 10
EH++LP R
Sbjct: 300 EHLNLPLVR 308
144|Sequence|716|725|LPGTRLPRWA
>sp|3BHS_VACCC|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 3 GTRLPRW 9
G+R+PRW
Sbjct: 272 GSRIPRW 278
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 3 GTRLPRW 9
G+R+PRW
Sbjct: 272 GSRIPRW 278
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 3 GTRLPRW 9
G+R+PRW
Sbjct: 272 GSRIPRW 278
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 3 GTRLPRW 9
G+R+PRW
Sbjct: 154 GSRIPRW 160
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 LPGTRLPRW 9
LPGT +P W
Sbjct: 2211 LPGTDIPPW 2219
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 LPGTRLPRW 9
LPGT +P W
Sbjct: 2211 LPGTDIPPW 2219
>sp|CAP9_ADE40|HEXON-INTERLACING protein IX|Human adenovirus F serotype 40
Query: 4 TRLPRWA 10
TRLP WA
Sbjct: 23 TRLPSWA 29
>sp|CAP9_ADE41|HEXON-INTERLACING protein IX|Human adenovirus F serotype 41
Query: 4 TRLPRWA 10
TRLP WA
Sbjct: 23 TRLPAWA 29
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 LPGTRLPRW 9
+PG R+ RW
Sbjct: 14 VPGRRMERW 22
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PGTRLP 7
PGTRLP
Sbjct: 132 PGTRLP 137
>sp|NCAP_MERS1|NUCLEOPROTEIN East respiratory syndrome-related coronavirus
Query: 2 PGTRLPR 8
PGT+LP+
Sbjct: 152 PGTKLPK 158
Query: 3 GTRLPRW 9
GT PRW
Sbjct: 287 GTEDPRW 293
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 PGTRLPRWA 10
PGT+ W
Sbjct: 997 PGTKFLNWG 1005
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 LPGTRLPRWA 10
+PG PRW+
Sbjct: 1377 IPGLTNPRWS 1386
>sp|PHOSP_NIPAV|PHOSPHOPROTEIN virus
Query: 2 PGTRLPR 8
PGT +P+
Sbjct: 392 PGTPMPK 398
>sp|CAP9_ADE12|HEXON-INTERLACING protein IX|Human adenovirus A serotype 12
Query: 4 TRLPRWA 10
+RLP WA
Sbjct: 23 SRLPYWA 29
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PGTRLP 7
PGTR P
Sbjct: 132 PGTRFP 137
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PGTRLP 7
PGTR P
Sbjct: 137 PGTRFP 142
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 PGTRLPRW 9
PGTR P +
Sbjct: 163 PGTRYPMY 170
>sp|CAP9_ADE05|HEXON-INTERLACING protein IX|Human adenovirus C serotype 5
Query: 4 TRLPRWA 10
TR+P WA
Sbjct: 17 TRMPPWA 23
>sp|CAP9_ADE02|HEXON-INTERLACING protein IX|Human adenovirus C serotype 2
Query: 4 TRLPRWA 10
TR+P WA
Sbjct: 17 TRMPPWA 23
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 2 PGTRLP 7
PGTR+P
Sbjct: 271 PGTRVP 276
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 PGTRLPR 8
PGT +P+
Sbjct: 390 PGTPMPK 396
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 1 LPGTRLPR 8
L GTRLP+
Sbjct: 193 LKGTRLPK 200
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 LPGTRL 6
PGTRL
Sbjct: 1562 FPGTRL 1567
>sp|W_NIPAV|PROTEIN W|Nipah virus
Query: 2 PGTRLPR 8
PGT +P+
Sbjct: 392 PGTPMPK 398
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LPGTRLPRWA 10
L G RL R+A
Sbjct: 2125 LDGVRLHRYA 2134
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 PGTRLPR 8
PG R PR
Sbjct: 145 PGIRYPR 151
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 LPGTRLPRWA 10
L G RL R+A
Sbjct: 2133 LDGVRLHRYA 2142
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 LPGTRLPRWA 10
L G RL R+A
Sbjct: 2130 LDGVRLHRYA 2139
>sp|V_NIPAV|NON-STRUCTURAL protein V|Nipah virus
Query: 2 PGTRLPR 8
PGT +P+
Sbjct: 392 PGTPMPK 398
>sp|US13_HCMVM|MEMBRANE protein US13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPGTRLPRWA 10
LP P+WA
Sbjct: 5 LPSLHSPQWA 14
>sp|US13_HCMVA|UNCHARACTERIZED protein HVLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPGTRLPRWA 10
LP P+WA
Sbjct: 5 LPSLHSPQWA 14
>sp|UL126_HCMVA|UNCHARACTERIZED protein UL126|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GTRLPR 8
GTR+PR
Sbjct: 91 GTRIPR 96
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 6 LPRW 9
LPRW
Sbjct: 429 LPRW 432
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PGTRLP 7
PGTR P
Sbjct: 131 PGTRYP 136
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 LPGTRLPRWA 10
LPG R+ WA
Sbjct: 201 LPGGRIYCWA 210
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PGTRLP 7
PGTR P
Sbjct: 133 PGTRYP 138
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PGTRLPR 8
PGTR P
Sbjct: 503 PGTRCPE 509
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 PGTRLPR 8
PGTR P
Sbjct: 503 PGTRCPE 509
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PGTRLPR 8
PGTR P
Sbjct: 503 PGTRCPE 509
145|Sequence|721|730|LPRWAHRQDA
>sp|PG005_MONPV|PROTEIN OPG005|Monkeypox virus (MPXV)
Query: 3 RWAHRQDA 10
RW HR+ A
Sbjct: 40 RWTHRESA 47
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RWAHRQDA 10
RW HR+ A
Sbjct: 71 RWTHRESA 78
>sp|TRX1_HHV7J|TRIPLEX capsid protein 1|Human herpesvirus 7 (strain JI)
Query: 2 PRWAHRQDA 10
P W RQ+A
Sbjct: 170 PDWEPRQNA 178
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 4 WAHRQD 9
W H QD
Sbjct: 19 WKHEQD 24
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 2 PRWAHR 7
P W HR
Sbjct: 310 PYWLHR 315
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 2 PRWAHR 7
P W HR
Sbjct: 315 PYWLHR 320
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 WAHRQD 9
WA+R D
Sbjct: 677 WANRMD 682
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 2 PRWAHR 7
P W HR
Sbjct: 310 PYWLHR 315
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 RWAHR 7
+WAHR
Sbjct: 1341 KWAHR 1345
>sp|VE2_HPV27|REGULATORY protein E2|Human papillomavirus 27
Query: 2 PRWAH 6
PRW H
Sbjct: 297 PRWDH 301
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RWAHRQDA 10
R HRQDA
Sbjct: 539 RRRHRQDA 546
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RWAHRQDA 10
R HRQDA
Sbjct: 539 RRRHRQDA 546
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 RWAHRQDA 10
R HRQDA
Sbjct: 529 RRRHRQDA 536
146|Sequence|726|735|HRQDAVSGTP
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HRQDAVSG 8
HRQDA+ G
Sbjct: 542 HRQDALPG 549
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HRQDAVSG 8
HRQDA+ G
Sbjct: 542 HRQDALPG 549
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 HRQDAVSG 8
HRQDA+ G
Sbjct: 532 HRQDALPG 539
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 547 QDGMSGAP 554
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 548 QDGMSGAP 555
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 547 QDGMSGAP 554
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 547 QDGMSGAP 554
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 547 QDGMSGAP 554
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 547 QDGMSGAP 554
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 547 QDGMSGAP 554
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 QDAVSGTP 10
QD +SG P
Sbjct: 548 QDGMSGAP 555
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 DAVSGT 9
DAVSGT
Sbjct: 657 DAVSGT 662
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 DAVSGT 9
DAVSGT
Sbjct: 657 DAVSGT 662
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 4 DAVSGT 9
DAVSGT
Sbjct: 657 DAVSGT 662
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 4 DAVSGT 9
DAVSGT
Sbjct: 657 DAVSGT 662
>sp|U9_HHV6U|PROTEIN U9|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HRQDAVSGT 9
H Q+ V GT
Sbjct: 86 HSQEMVDGT 94
>sp|VU9_HHV6Z|PROTEIN U9|Human herpesvirus 6B (strain Z29)
Query: 1 HRQDAVSGT 9
H Q+ V GT
Sbjct: 86 HSQEIVGGT 94
>sp|VU9_HHV6H|PROTEIN U9|Human herpesvirus 6B (HHV-6 variant
Query: 1 HRQDAVSGT 9
H Q+ V GT
Sbjct: 86 HSQEIVGGT 94
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 DAVSGTP 10
DA+SG P
Sbjct: 711 DALSGCP 717
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 DAVSGTP 10
DA+SG P
Sbjct: 727 DALSGCP 733
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 2 RQDAVSGTP 10
++DA GTP
Sbjct: 197 QKDAAPGTP 205
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 RQDAVSGTP 10
++DA GTP
Sbjct: 197 QKDAAPGTP 205
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 RQDAVSGTP 10
++DA GTP
Sbjct: 197 QKDAAPGTP 205
147|Sequence|731|740|VSGTPLLREE
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1476 VNGTPMLISE 1485
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1640 VNGTPMLISE 1649
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 VSGTPLLREE 10
V+GTP+L E
Sbjct: 1642 VNGTPMLISE 1651
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 4 TPLLREE 10
TPLLRE+
Sbjct: 145 TPLLRED 151
>sp|VE2_HPV37|REGULATORY protein E2|Human papillomavirus 37
Query: 1 VSGTPLLR 8
VSG+PL R
Sbjct: 218 VSGSPLAR 225
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 PLLREE 10
PLLREE
Sbjct: 2140 PLLREE 2145
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 5 PLLREE 10
PLLREE
Sbjct: 2140 PLLREE 2145
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 5 PLLREE 10
PLLREE
Sbjct: 2139 PLLREE 2144
>sp|VE6_HPV29|PROTEIN E6|Human papillomavirus 29
Query: 5 PLLREE 10
PL+REE
Sbjct: 108 PLVREE 113
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 TPLLRE 9
TPL+RE
Sbjct: 319 TPLIRE 324
>sp|CAP9_ADE02|HEXON-INTERLACING protein IX|Human adenovirus C serotype 2
Query: 1 VSGTPL 6
VSGTPL
Sbjct: 52 VSGTPL 57
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 5 PLLREE 10
PLLR+E
Sbjct: 723 PLLRDE 728
>sp|CAP9_ADE05|HEXON-INTERLACING protein IX|Human adenovirus C serotype 5
Query: 1 VSGTPL 6
VSGTPL
Sbjct: 52 VSGTPL 57
>sp|VE6_HPV10|PROTEIN E6|Human papillomavirus type 10
Query: 5 PLLREE 10
PL+REE
Sbjct: 108 PLVREE 113
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 1 VSGTPL 6
VSGTPL
Sbjct: 340 VSGTPL 345
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VSGTPLLRE 9
+SG LLRE
Sbjct: 275 ISGCDLLRE 283
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VSGTPLLRE 9
+SG LLRE
Sbjct: 275 ISGCDLLRE 283
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 3 GTPLLREE 10
G PL REE
Sbjct: 108 GPPLSREE 115
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 VSGTPLL 7
+SG PLL
Sbjct: 117 ISGNPLL 123
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 1 VSGTPLLRE 9
VSG PLL +
Sbjct: 114 VSGHPLLNK 122
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 GTPLLRE 9
GTP+LR+
Sbjct: 839 GTPILRK 845
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2141 PLLRDE 2146
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2140 PLLRDE 2145
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2145 PLLRDE 2150
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLRE+
Sbjct: 2139 PLLRED 2144
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2144 PLLRDE 2149
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2139 PLLRDE 2144
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2139 PLLRDE 2144
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2144 PLLRDE 2149
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 5 PLLREE 10
PLLRE+
Sbjct: 2139 PLLRED 2144
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2147 PLLRDE 2152
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 PLLREE 10
PLLR+E
Sbjct: 2143 PLLRDE 2148
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 VSGTPLLRE 9
+SG PLL +
Sbjct: 117 ISGHPLLNK 125
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GTPLLRE 9
GTP LR+
Sbjct: 841 GTPTLRQ 847
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 VSGTPLLRE 9
+SG P +RE
Sbjct: 10 ISGWPAVRE 18
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GTPLLR 8
GTP+LR
Sbjct: 820 GTPVLR 825
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GTPLLRE 9
GTP LR+
Sbjct: 841 GTPTLRQ 847
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 VSGTPLLRE 9
+SG PLL +
Sbjct: 147 ISGHPLLNK 155
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 VSGTPLLRE 9
+SG PLL +
Sbjct: 146 ISGHPLLNK 154
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 1 VSGTPLLRE 9
+SG PLL +
Sbjct: 114 ISGHPLLNK 122
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 3 GTPLLR 8
GTP+LR
Sbjct: 820 GTPVLR 825
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 VSGTPLLRE 9
+SG PLL +
Sbjct: 117 ISGHPLLNK 125
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 GTPLLRE 9
GTP LR+
Sbjct: 841 GTPTLRQ 847
148|Sequence|736|745|LLREEQQEHQ
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 LREEQQEHQ 10
+ EE+Q HQ
Sbjct: 1170 ITEEEQSHQ 1178
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 LREEQQEHQ 10
+ EE+Q HQ
Sbjct: 1170 ITEEEQSHQ 1178
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LLREEQQEH 9
+LR Q+EH
Sbjct: 187 MLRYRQREH 195
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 LREEQQEHQ 10
L+EEQ +HQ
Sbjct: 104 LQEEQDKHQ 112
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 LLREEQQEH 9
+LR Q+EH
Sbjct: 187 MLRYRQREH 195
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 3 REEQQEHQ 10
+E+Q EH+
Sbjct: 787 KEKQPEHE 794
>sp|GAG_HV1M2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 LREEQQEHQ 10
L+EEQ +HQ
Sbjct: 104 LQEEQDKHQ 112
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 3 REEQQEHQ 10
+E+Q EH+
Sbjct: 787 KEKQPEHE 794
149|Sequence|741|750|QQEHQQQQQE
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 790 QPEHEQQ 796
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 4 HQQQQQE 10
HQ QQ+E
Sbjct: 795 HQLQQEE 801
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 790 QPEHEQQ 796
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 789 QLEHEQQ 795
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 789 QLEHEQQ 795
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 789 QLEHEQQ 795
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 789 QLEHEQQ 795
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 QQEHQQQ 7
Q EH+QQ
Sbjct: 804 QLEHEQQ 810
150|Sequence|746|755|QQQQEEEEEE
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 646 QNQQEKNEQE 655
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 626 QNQQEKNEQE 635
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 650 QNQQEKNEQE 659
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE E+E
Sbjct: 637 QNQQERNEQE 646
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 659 QNQQEKNEQE 668
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 650 QNQQEKNEQE 659
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 647 QTQQEKNEKE 656
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 QQEEEEEE 10
Q EEE+EE
Sbjct: 970 QPEEEQEE 977
Query: 2 QQQEEEEEE 10
Q +EE+EE+
Sbjct: 970 QPEEEQEED 978
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 QQEEEEEE 10
Q EEE+EE
Sbjct: 970 QPEEEQEE 977
Query: 2 QQQEEEEEE 10
Q +EE+EE+
Sbjct: 970 QPEEEQEED 978
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 648 QNQQEKNEQE 657
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 650 QNQQEKNEQE 659
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 640 QNQQEKNEQE 649
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 641 QNQQEKNEQE 650
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 650 QNQQEKNEQE 659
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 650 QNQQEKNEQE 659
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 650 QNQQEKNEQE 659
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 645 QNQQEKNEQE 654
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 655 QNQQEKNEQE 664
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 649 QNQQEKNEQE 658
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 649 QTQQEKNEQE 658
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 651 QTQQEKNEQE 660
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 647 QTQQEKNEQE 656
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 649 QNQQEKNEQE 658
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 637 QNQQEKNEQE 646
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 661 QNQQEKNEQE 670
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 647 QTQQEKNEKE 656
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 646 QIQQEKNEKE 655
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 652 QIQQEKNEKE 661
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 640 QIQQEKNEKE 649
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QQQQEEEEEE 10
Q QQE+ E+E
Sbjct: 642 QIQQEKNEQE 651
151|Sequence|751|760|EEEEEEDSRD
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EEEEEEDSRD 10
EEE+EED D
Sbjct: 972 EEEQEEDWLD 981
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EEEEEEDSRD 10
EEE+EED D
Sbjct: 972 EEEQEEDWLD 981
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 EEEEDSRD 10
+EEED R+
Sbjct: 2261 KEEEDDRE 2268
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 EEEDSRD 10
EEED R+
Sbjct: 2261 EEEDERE 2267
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 2 EEEEEDSRD 10
E+E EDS D
Sbjct: 34 EDENEDSSD 42
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EEEEEEDSRD 10
EEE E RD
Sbjct: 737 EEEGGEQDRD 746
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 EEEEDSR 9
EEEED R
Sbjct: 55 EEEEDER 61
152|Sequence|756|765|EDSRDEGLGV
>sp|RIR2_YLDV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Yaba-like disease virus (YLDV)
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 199 SRDEGL 204
>sp|RIR2_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 194 SRDEGL 199
>sp|RIR2_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 194 SRDEGL 199
>sp|RIR2_VACCP|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 194 SRDEGL 199
>sp|RIR2_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 194 SRDEGL 199
>sp|RIR2_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Vaccinia virus (strain Ankara) (VACV)
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 194 SRDEGL 199
>sp|RIR2_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase small chain|Monkeypox virus (MPXV)
Query: 3 SRDEGL 8
SRDEGL
Sbjct: 194 SRDEGL 199
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 1 EDSRDEG 7
EDS DEG
Sbjct: 8 EDSADEG 14
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 EDSRDEGLGV 10
+D +DE LG+
Sbjct: 139 QDQKDEVLGI 148
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 1 EDSRDEGLG 9
ED DEG G
Sbjct: 178 EDDNDEGEG 186
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 EDSRDE 6
ED+RDE
Sbjct: 534 EDARDE 539
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 SRDEGLGV 10
+RD GLG+
Sbjct: 780 ARDNGLGI 787
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 4 RDEGLG 9
R+EGLG
Sbjct: 87 RNEGLG 92
>sp|ORF0_VZVO|MEMBRANE protein 0|Varicella-zoster virus (strain Oka vaccine)
Query: 4 RDEGLG 9
RD GLG
Sbjct: 188 RDRGLG 193
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 1 EDSRDEGLG 9
E + DEG G
Sbjct: 4 EGTEDEGAG 12
153|Sequence|761|770|EGLGVATPHQ
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 EGLGVATPH 9
E LGV PH
Sbjct: 102 ETLGVLVPH 110
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 EGLGVATPH 9
E LGV PH
Sbjct: 102 ETLGVLVPH 110
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 EGLGVATPH 9
EGL + PH
Sbjct: 1057 EGLAASPPH 1065
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 EGLGVATPH 9
EGL + PH
Sbjct: 1057 EGLAASPPH 1065
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 3 LGVATPHQ 10
+G++ PH+
Sbjct: 396 IGISVPHE 403
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 3 LGVATPHQ 10
+G++ PH+
Sbjct: 396 IGISVPHE 403
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 5 VATPHQ 10
+ATPH+
Sbjct: 5345 IATPHK 5350
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 302 ALGVATAH 309
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 1 EGLGVATPHQ 10
+GLG +PH+
Sbjct: 426 KGLGKDSPHK 435
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 1 EGLGVATPHQ 10
+GLG +PH+
Sbjct: 416 KGLGKDSPHK 425
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 1 EGLGVATPHQ 10
+GLG +PH+
Sbjct: 421 KGLGKDSPHK 430
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 GLGVATPH 9
G VATPH
Sbjct: 779 GKRVATPH 786
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 LGVATPH 9
LGV PH
Sbjct: 104 LGVLVPH 110
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 LGVATPH 9
LGV PH
Sbjct: 104 LGVLVPH 110
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GLGVATPH 9
G VATPH
Sbjct: 780 GKRVATPH 787
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 821 GLGFSTPDE 829
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 822 GLGFSTPDE 830
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 821 GLGFSTPDE 829
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 823 GLGFSTPDE 831
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 823 GLGFSTPDE 831
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 820 GLGFSTPDE 828
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 822 GLGFSTPDE 830
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG+ PH
Sbjct: 53 GLGLTPPH 60
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 GLGVATPHQ 10
GLG +TP +
Sbjct: 822 GLGFSTPDE 830
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 1 EGLGVAT 7
EGLGV++
Sbjct: 376 EGLGVSS 382
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 1 EGLGVAT 7
EGLGV++
Sbjct: 376 EGLGVSS 382
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 302 ALGVATAH 309
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 302 ALGVATAH 309
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 302 ALGVATAH 309
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 302 ALGVATAH 309
>sp|NCAP_SINV|NUCLEOPROTEIN Nombre orthohantavirus (SNV) (Sin
Query: 5 VATPH 9
+ATPH
Sbjct: 298 IATPH 302
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 2 GLGVATPH 9
LGVAT H
Sbjct: 320 ALGVATAH 327
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 1 EGLGVATPHQ 10
+ LGV TP +
Sbjct: 535 DSLGVPTPSK 544
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 5 VATPH 9
+ATPH
Sbjct: 298 IATPH 302
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 EGLGVATPH 9
EGL + PH
Sbjct: 1056 EGLLASAPH 1064
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG PH
Sbjct: 53 GLGFTPPH 60
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG PH
Sbjct: 53 GLGFTPPH 60
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG PH
Sbjct: 53 GLGFTPPH 60
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG PH
Sbjct: 53 GLGFTPPH 60
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG PH
Sbjct: 53 GLGFTPPH 60
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 EGLGVATP 8
EGLG TP
Sbjct: 382 EGLGDITP 389
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 EGLGVATP 8
EGLG TP
Sbjct: 385 EGLGDITP 392
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 2 GLGVATPH 9
GLG PH
Sbjct: 53 GLGFTPPH 60
154|Sequence|766|775|ATPHQATQVP
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 ATPHQATQV 9
ATPH+AT V
Sbjct: 169 ATPHEATNV 177
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PHQATQVP 10
PHQ+ +VP
Sbjct: 489 PHQSYEVP 496
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PHQATQVP 10
PHQ+ +VP
Sbjct: 489 PHQSYEVP 496
>sp|SCAF_EBVA8|CAPSID scaffolding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PHQATQVP 10
PHQ+ +VP
Sbjct: 489 PHQSYEVP 496
>sp|HN_PI4HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 4a virus (strain
Query: 2 TPHQATQVP 10
TPH ++P
Sbjct: 169 TPHGCIRIP 177
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 TPHQATQV 9
TPHQ QV
Sbjct: 650 TPHQTPQV 657
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 TPHQATQV 9
TPHQ QV
Sbjct: 650 TPHQTPQV 657
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TPHQATQV 9
TPHQ QV
Sbjct: 650 TPHQPPQV 657
155|Sequence|771|780|ATQVPEGAAK
>sp|PG193_VACCC|SOLUBLE interferon gamma receptor OPG193|Vaccinia virus (strain
Query: 2 TQVPEG 7
T VPEG
Sbjct: 58 TNVPEG 63
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 2 TQVPEG 7
T VPEG
Sbjct: 58 TNVPEG 63
>sp|GAG_HV2UC|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 TQVPEG 7
TQVP+G
Sbjct: 447 TQVPQG 452
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 TQVPEG 7
TQVP+G
Sbjct: 447 TQVPQG 452
156|Sequence|776|785|EGAAKWGLVA
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 769 EGASKLGLI 777
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 EGAAKWGLV 9
EGA+K GL+
Sbjct: 768 EGASKLGLI 776
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EGAAKWGLV 9
EGA+ WG V
Sbjct: 429 EGASAWGKV 437
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 EGAAKWGL 8
EGA +W L
Sbjct: 256 EGAEEWSL 263
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 EGAAKWGL 8
EGA +W L
Sbjct: 256 EGAEEWSL 263
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 EGAAKWGL 8
EGA +W L
Sbjct: 256 EGAEEWSL 263
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 EGAAKWGL 8
EGA +W L
Sbjct: 256 EGAEEWSL 263
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 EGAAKW 6
EGAA+W
Sbjct: 1914 EGAAQW 1919
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 EGAAKWGLV 9
EG+ W LV
Sbjct: 254 EGSEPWSLV 262
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 3 AAKWGLV 9
A WGLV
Sbjct: 366 AVSWGLV 372
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 1 EGAAKWGLV 9
+GA+K GL+
Sbjct: 768 DGASKLGLI 776
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 EGAAKWGLV 9
+GA+K GL+
Sbjct: 769 DGASKLGLI 777
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 EGAAKWGL 8
EG WGL
Sbjct: 700 EGGGPWGL 707
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 4 AKWGLVA 10
AK+GLVA
Sbjct: 579 AKFGLVA 585
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 4 AKWGLVA 10
AK+GLVA
Sbjct: 579 AKFGLVA 585
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 EGAAKWG 7
+GA WG
Sbjct: 3 QGAPSWG 9
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 EGAAKWGL 8
EG+ +W L
Sbjct: 255 EGSVEWSL 262
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 EGAAKWGL 8
EG+ +W L
Sbjct: 255 EGSVEWSL 262
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 EGAAKWGL 8
EG+ +W L
Sbjct: 255 EGSVEWSL 262
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 3 AAKWGLV 9
A WGL+
Sbjct: 366 AVSWGLI 372
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 3 AAKWGLV 9
+ KWG+V
Sbjct: 269 SCKWGMV 275
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 GAAKWGL 8
GAA WGL
Sbjct: 505 GAAFWGL 511
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 GAAKWGLVA 10
A WG++A
Sbjct: 349 AGAHWGIIA 357
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 AAKWGLV 9
A WG+V
Sbjct: 248 ACSWGMV 254
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 AAKWGLV 9
A WG+V
Sbjct: 268 ACSWGMV 274
157|Sequence|781|790|WGLVAERLLE
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 WGLVAER 7
W LVAER
Sbjct: 227 WSLVAER 233
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 1 WGLVAER 7
W LVAER
Sbjct: 227 WSLVAER 233
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 WGLVAERL 8
WG+VA+R+
Sbjct: 2796 WGMVADRV 2803
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 WGLVAERLLE 10
+GL ERL E
Sbjct: 575 FGLAPERLFE 584
158|Sequence|786|795|ERLLELAAGF
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 ERLLELAA 8
ERL ELA+
Sbjct: 580 ERLFELAS 587
159|Sequence|791|800|LAAGFSDVLS
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 960 LAAGFSE 966
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 959 LAAGFSE 965
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 961 LAAGFSE 967
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 959 LAAGFSE 965
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 969 LAAGFSE 975
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 962 LAAGFSE 968
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 950 LAAGFSE 956
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 950 LAAGFSE 956
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 951 LAAGFSE 957
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 951 LAAGFSE 957
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 951 LAAGFSE 957
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 953 LAAGFSE 959
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 948 LAAGFSE 954
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 LAAGFSD 7
LAAGFS+
Sbjct: 967 LAAGFSE 973
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 FSDVLS 10
FSDVLS
Sbjct: 1510 FSDVLS 1515
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 3 AGFSDVLS 10
AGF+ +LS
Sbjct: 332 AGFTSILS 339
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 AAGFSD 7
AAGF+D
Sbjct: 2729 AAGFTD 2734
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 LAAGFSDV 8
LAAGF V
Sbjct: 494 LAAGFGKV 501
>sp|TEG4_HHV1E|TEGUMENT protein UL21|Human herpesvirus 1 (strain HFEM)
Query: 2 AAGFSDVL 9
AAG+ DVL
Sbjct: 514 AAGYLDVL 521
>sp|TEG4_HHV11|TEGUMENT protein UL21|Human herpesvirus 1 (strain 17)
Query: 2 AAGFSDVL 9
AAG+ DVL
Sbjct: 514 AAGYLDVL 521
160|Sequence|796|805|SDVLSRVQVF
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 5 SRVQVF 10
SRVQVF
Sbjct: 581 SRVQVF 586
161|Sequence|801|810|RVQVFLRRLL
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 5 FLRRLL 10
FLRRLL
Sbjct: 554 FLRRLL 559
162|Sequence|806|815|LRRLLELHVF
>sp|KITH_HHV2H|THYMIDINE kinase|Human herpesvirus 2 (strain HG52)
Query: 3 RLLELHVF 10
RLL +H+F
Sbjct: 319 RLLPMHLF 326
>sp|KITH_HHV23|THYMIDINE kinase|Human herpesvirus 2 (strain 333)
Query: 3 RLLELHVF 10
RLL +H+F
Sbjct: 319 RLLPMHLF 326
>sp|KITH_HHV1S|THYMIDINE kinase|Human herpesvirus 1 (strain SC16)
Query: 2 RRLLELHVF 10
+RL +HVF
Sbjct: 317 KRLRPMHVF 325
>sp|KITH_HHV1K|THYMIDINE kinase|Human herpesvirus 1 (strain KOS)
Query: 2 RRLLELHVF 10
+RL +HVF
Sbjct: 317 KRLRPMHVF 325
>sp|KITH_HHV1E|THYMIDINE kinase|Human herpesvirus 1 (strain HFEM)
Query: 2 RRLLELHVF 10
+RL +HVF
Sbjct: 317 KRLRPMHVF 325
>sp|KITH_HHV1C|THYMIDINE kinase|Human herpesvirus 1 (strain CL101)
Query: 2 RRLLELHVF 10
+RL +HVF
Sbjct: 317 KRLRPMHVF 325
>sp|KITH_HHV11|THYMIDINE kinase|Human herpesvirus 1 (strain 17)
Query: 2 RRLLELHVF 10
+RL +HVF
Sbjct: 317 KRLRPMHVF 325
>sp|KITH_HHV1|THYMIDINE kinase|Human herpesvirus 1 (HHV-1) (Human
Query: 2 RRLLELHVF 10
+RL +HVF
Sbjct: 317 KRLRPMHVF 325
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRRLLELHVF 10
L RLL LH++
Sbjct: 226 LARLLYLHLY 235
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LRRLLELHVF 10
L RLL LH++
Sbjct: 226 LARLLYLHLY 235
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 1 LRRLLELH 8
+R+LL++H
Sbjct: 458 IRKLLDIH 465
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 LRRLLELHVF 10
LRR LEL +
Sbjct: 675 LRRKLELFTY 684
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 LRRLLELHV 9
+RRLLE +V
Sbjct: 2045 IRRLLEKNV 2053
>sp|E1BS_ADE41|E1B protein, small T-antigen|Human adenovirus F serotype 41
Query: 1 LRRLLEL 7
LRRLLEL
Sbjct: 13 LRRLLEL 19
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LRRLLELH 8
+R+L +LH
Sbjct: 458 IRKLFDLH 465
>sp|E1BS_ADE40|E1B protein, small T-antigen|Human adenovirus F serotype 40
Query: 1 LRRLLEL 7
LRRLLEL
Sbjct: 13 LRRLLEL 19
163|Sequence|811|820|ELHVFKLVAL
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LHVFKL 7
LHVFKL
Sbjct: 502 LHVFKL 507
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LHVFKL 7
LHVFKL
Sbjct: 502 LHVFKL 507
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 3 HVFKLV 8
H+FKLV
Sbjct: 89 HLFKLV 94
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 2 LHVFK 6
LHVFK
Sbjct: 340 LHVFK 344
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 1 ELHVFKL 7
+ HVFKL
Sbjct: 371 QTHVFKL 377
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 ELHVFKL 7
+ HVFKL
Sbjct: 311 QTHVFKL 317
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 3 HVFKLV 8
H+FKLV
Sbjct: 52 HLFKLV 57
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate
Query: 3 HVFKLV 8
H+FKLV
Sbjct: 49 HLFKLV 54
164|Sequence|816|825|KLVALYTVWV
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 ALYTVW 9
+LYTVW
Sbjct: 2406 SLYTVW 2411
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 ALYTVW 9
+LYTVW
Sbjct: 2376 SLYTVW 2381
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 ALYTVW 9
+LYTVW
Sbjct: 2356 SLYTVW 2361
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 ALYTVW 9
+LYTVW
Sbjct: 2406 SLYTVW 2411
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 ALYTVW 9
+LYTVW
Sbjct: 2376 SLYTVW 2381
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 ALYTVW 9
+LYTVW
Sbjct: 2356 SLYTVW 2361
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 LVALYTVWV 10
LVAL T W+
Sbjct: 254 LVALATAWM 262
>sp|VE2_HPV15|REGULATORY protein E2|Human papillomavirus 15
Query: 3 VALYTVW 9
+ +YTVW
Sbjct: 54 IMVYTVW 60
>sp|UL63_HCMVA|UNCHARACTERIZED protein UL63|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KLVALYTVWV 10
KL++LY ++
Sbjct: 53 KLISLYVTYI 62
>sp|VE2_HPV47|REGULATORY protein E2|Human papillomavirus 47
Query: 5 LYTVW 9
LYT+W
Sbjct: 130 LYTMW 134
>sp|VE2_HPV05|REGULATORY protein E2|Human papillomavirus 5
Query: 5 LYTVW 9
LYT+W
Sbjct: 130 LYTMW 134
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 3 VALYTVWV 10
+ LY VW+
Sbjct: 16 ITLYAVWL 23
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1140 AIYVAWV 1146
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1141 AIYVAWV 1147
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1139 AIYVAWV 1145
>sp|VE2_HPV5B|REGULATORY protein E2|Human papillomavirus type 5b
Query: 5 LYTVW 9
LYT+W
Sbjct: 130 LYTMW 134
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 LYTVWV 10
LY +W+
Sbjct: 266 LYAIWI 271
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 LYTVWV 10
LY +W+
Sbjct: 266 LYAIWI 271
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 LYTVWV 10
LY +W+
Sbjct: 266 LYAIWI 271
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1139 AIYVAWV 1145
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 4 ALYTVW 9
ALYT W
Sbjct: 2318 ALYTAW 2323
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 ALYTVW 9
ALYT W
Sbjct: 2318 ALYTAW 2323
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1138 AIYVAWV 1144
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LVALYTVW 9
L A Y +W
Sbjct: 151 LAAFYALW 158
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 LVALYTVW 9
L A Y +W
Sbjct: 220 LAAFYALW 227
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LVALYTVW 9
L A Y +W
Sbjct: 220 LAAFYALW 227
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 5 LYTVW 9
LYT+W
Sbjct: 130 LYTMW 134
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 3 VALYTVWV 10
+ LY VW+
Sbjct: 16 ITLYAVWL 23
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 5 LYTVW 9
L+TVW
Sbjct: 683 LFTVW 687
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ALYTVW 9
ALY VW
Sbjct: 789 ALYGVW 794
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ALYTVW 9
ALY VW
Sbjct: 789 ALYGVW 794
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ALYTVW 9
ALY VW
Sbjct: 789 ALYGVW 794
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ALYTVW 9
ALY VW
Sbjct: 789 ALYGVW 794
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ALYTVW 9
ALY VW
Sbjct: 789 ALYGVW 794
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1139 AVYVAWV 1145
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1140 AVYVAWV 1146
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 4 ALYTVWV 10
A+Y WV
Sbjct: 1141 AVYVAWV 1147
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 6 YTVW 9
YTVW
Sbjct: 679 YTVW 682
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 5 LYTVW 9
+YT+W
Sbjct: 143 VYTIW 147
165|Sequence|821|830|YTVWVALKEV
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 YTVWVALK 8
Y VWVA++
Sbjct: 1303 YNVWVAVQ 1310
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 YTVWVAL 7
+TVWV L
Sbjct: 630 FTVWVTL 636
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 YTVWVALKEV 10
Y W+ LK++
Sbjct: 2106 YNRWITLKDI 2115
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 YTVWVALKEV 10
Y W+ LK++
Sbjct: 2106 YNRWITLKDI 2115
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 YTVWVA 6
Y VWVA
Sbjct: 2172 YVVWVA 2177
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 YTVWVA 6
Y VWVA
Sbjct: 2142 YVVWVA 2147
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 YTVWVA 6
Y VWVA
Sbjct: 2122 YVVWVA 2127
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 YTVWVA 6
Y VWVA
Sbjct: 2172 YVVWVA 2177
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 YTVWVA 6
Y VWVA
Sbjct: 2142 YVVWVA 2147
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 YTVWVA 6
Y VWVA
Sbjct: 2122 YVVWVA 2127
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 VWVALKE 9
+W ALKE
Sbjct: 1550 LWPALKE 1556
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 YTVWV 5
YTVW+
Sbjct: 194 YTVWM 198
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 YTVWV 5
YTVW+
Sbjct: 194 YTVWM 198
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 YTVWVALK 8
YT+W+ ++
Sbjct: 194 YTIWMPVE 201
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VWVALKEV 10
+W+ L+EV
Sbjct: 940 IWLKLREV 947
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VWVALKEV 10
+W+ L+EV
Sbjct: 940 IWLKLREV 947
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VWVALKEV 10
+W+ L+EV
Sbjct: 940 IWLKLREV 947
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 TVWVALK 8
TVW A+K
Sbjct: 424 TVWDAIK 430
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VWVALKEV 10
+W+ L+EV
Sbjct: 940 IWLKLREV 947
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 VWVALKEV 10
+W+ L+EV
Sbjct: 940 IWLKLREV 947
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 YTVWVAL 7
+TVW A+
Sbjct: 289 HTVWTAV 295
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 YTVWVAL 7
YT+W A+
Sbjct: 131 YTLWTAV 137
>sp|GLYCO_DUVV|GLYCOPROTEIN virus (DUVV)
Query: 1 YTVWV 5
YT+W+
Sbjct: 194 YTIWM 198
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 1 YTVWV 5
YT+W+
Sbjct: 194 YTIWM 198
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 1 YTVWV 5
YT+W+
Sbjct: 194 YTIWM 198
166|Sequence|826|835|ALKEVSVMNL
***** No hits found ******
167|Sequence|831|840|SVMNLLLVVL
***** No hits found ******
168|Sequence|836|845|LLVVLWAFAL
>sp|VPU_HV1AN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 3 VVLWAFAL 10
V+LW F L
Sbjct: 20 VILWGFIL 27
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 4 VLWAFAL 10
+LW+FA+
Sbjct: 329 LLWSFAM 335
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 VLWAFAL 10
+LW+FA+
Sbjct: 329 LLWSFAM 335
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 LLVVLWAF 8
LLV+L+AF
Sbjct: 5 LLVLLYAF 12
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 1 LLVVLWAFA 9
L++VLW +
Sbjct: 12 LIIVLWLYG 20
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LLVVLWAFA 9
L++VLW +
Sbjct: 12 LIIVLWLYG 20
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 1 LLVVLWAFA 9
L++VLW +
Sbjct: 12 LIIVLWLYG 20
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LLVVLWAFA 9
L++VLW +
Sbjct: 12 LIIVLWLYG 20
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 LLVVLWAFA 9
LLV+L AFA
Sbjct: 5 LLVLLCAFA 13
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 1 LLVVLWAFA 9
LLV+L AFA
Sbjct: 5 LLVLLCAFA 13
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 1 LLVVLWAFA 9
LLV+L AFA
Sbjct: 5 LLVLLCAFA 13
>sp|ORF2_TTVA1|UNCHARACTERIZED ORF2 protein|Torque teno virus 1 (isolate
Query: 1 LLVVLW 6
LL+V+W
Sbjct: 79 LLIVMW 84
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 1 LLVVLWAF 8
L VVLW+
Sbjct: 8 LAVVLWSL 15
>sp|VE6_HPV2A|PROTEIN E6|Human papillomavirus type 2a
Query: 5 LWAFAL 10
+WAFA+
Sbjct: 41 IWAFAI 46
169|Sequence|841|850|WAFALPYPRF
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 WAFALPYPRF 10
W PYPRF
Sbjct: 749 WQEGQPYPRF 758
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 WAFALPYPR 9
W FA+ YPR
Sbjct: 1241 WRFAMNYPR 1249
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 WAFALPYPR 9
W FA+ YPR
Sbjct: 1241 WRFAMNYPR 1249
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 WAFALPYPR 9
W FA+ YPR
Sbjct: 1241 WRFAMNYPR 1249
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WAFALPYP 8
W F LP P
Sbjct: 490 WFFDLPLP 497
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WAFALPYP 8
W F LP P
Sbjct: 490 WFFDLPLP 497
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WAFALPYP 8
W F LP P
Sbjct: 490 WFFDLPLP 497
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WAFALPYP 8
W F LP P
Sbjct: 490 WFFDLPLP 497
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WAFALPYP 8
W F LP P
Sbjct: 490 WFFDLPLP 497
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 2 AFALPYPR 9
FALP PR
Sbjct: 460 TFALPNPR 467
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 2 AFALPYPR 9
FALP PR
Sbjct: 460 TFALPNPR 467
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 WAFALPYPRF 10
W+ +PRF
Sbjct: 994 WSITPLFPRF 1003
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 4 ALPYPRF 10
A+P+P F
Sbjct: 616 AVPWPEF 622
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 4 ALPYPRF 10
A+P+P F
Sbjct: 616 AVPWPEF 622
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 WAFALP 6
W+ ALP
Sbjct: 260 WSLALP 265
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 WAFALP 6
W+ ALP
Sbjct: 261 WSLALP 266
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 WAFALP 6
W+ ALP
Sbjct: 260 WSLALP 265
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 1 WAFALPYP 8
W F +P P
Sbjct: 413 WNFGVPPP 420
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 AFALPYPRF 10
FALP P +
Sbjct: 324 TFALPNPHY 332
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 WAFALP 6
W+ ALP
Sbjct: 260 WSLALP 265
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 1 WAFALPYP 8
W F +P P
Sbjct: 412 WNFGVPPP 419
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 WAFALP 6
W +A+P
Sbjct: 270 WVYAIP 275
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 FALPY 7
FALPY
Sbjct: 51 FALPY 55
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 FALPY 7
FALPY
Sbjct: 51 FALPY 55
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 FALPY 7
FALPY
Sbjct: 49 FALPY 53
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 3 FALPY 7
FALPY
Sbjct: 94 FALPY 98
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 1 WAFALPYP 8
W F +P P
Sbjct: 507 WNFGVPPP 514
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 WAFALPYPR 9
WA LP PR
Sbjct: 93 WAGWLPSPR 101
170|Sequence|846|855|PYPRFRPMAS
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 YPRFRPM 8
+P FRPM
Sbjct: 520 HPAFRPM 526
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YPRFRPM 8
+P FRPM
Sbjct: 520 HPAFRPM 526
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 PYPRFRPMAS 10
P P FR M S
Sbjct: 47 PVPHFRDMHS 56
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 PYPRFRPMAS 10
P P FR M S
Sbjct: 47 PVPHFRDMHS 56
>sp|U21_HHV7R|U21 glycoprotein|Human herpesvirus 7 (strain RK)
Query: 2 YPRFRPMA 9
YP F P+A
Sbjct: 17 YPDFCPLA 24
>sp|U21_HHV7J|U21 glycoprotein|Human herpesvirus 7 (strain JI)
Query: 2 YPRFRPMA 9
YP F P+A
Sbjct: 17 YPDFCPLA 24
>sp|GCVK_HHV7J|PROBABLE ganciclovir kinase|Human herpesvirus 7 (strain JI)
Query: 3 PRFRPM 8
P FRPM
Sbjct: 359 PGFRPM 364
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 PYPRFR 6
P+P FR
Sbjct: 300 PFPHFR 305
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YPRFRPM 8
+P FRPM
Sbjct: 520 HPAFRPM 526
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 PRFRPM 8
P+FRP+
Sbjct: 1443 PKFRPI 1448
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 PRFRPM 8
P+FRP+
Sbjct: 1443 PKFRPI 1448
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 PRFRPM 8
P+FRP+
Sbjct: 1443 PKFRPI 1448
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 YPRFRPMA 9
Y RFRP A
Sbjct: 247 YKRFRPKA 254
>sp|UL95_HCMVM|PROTEIN UL95|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PYPRFR 6
PY RFR
Sbjct: 139 PYDRFR 144
>sp|UL95_HCMVA|PROTEIN UL95|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PYPRFR 6
PY RFR
Sbjct: 139 PYDRFR 144
>sp|UL95_HCMVT|PROTEIN UL95|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PYPRFR 6
PY RFR
Sbjct: 139 PYDRFR 144
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 PRFRPM 8
P+FRP+
Sbjct: 1405 PKFRPV 1410
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 PRFRPM 8
P+FRP+
Sbjct: 1443 PKFRPI 1448
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 1 PYPRFRP 7
P P FRP
Sbjct: 16 PRPAFRP 22
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 PYPRFRPMA 9
P P F+P A
Sbjct: 438 PLPAFKPGA 446
171|Sequence|851|860|RPMASCLSTV
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 3 MASCLSTV 10
+A CLST+
Sbjct: 276 IAKCLSTL 283
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 1 RPMASCL 7
RPM C+
Sbjct: 107 RPMPGCM 113
>sp|UL109_HCMVA|UNCHARACTERIZED protein UL109|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RPMASCL 7
RP ASC
Sbjct: 64 RPAASCF 70
172|Sequence|856|865|CLSTVWTCVI
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 CLSTVWTCV 9
C + VWTC+
Sbjct: 88 CRAEVWTCL 96
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 CLSTVWTC 8
C +VWTC
Sbjct: 980 CGRSVWTC 987
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 CLSTVWTC 8
C VWTC
Sbjct: 979 CKGPVWTC 986
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 CLSTVWTC 8
C VWTC
Sbjct: 979 CKGPVWTC 986
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 CLSTVWTCV 9
CLS WT V
Sbjct: 2510 CLSITWTLV 2518
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 CLSTVWTCV 9
CLS +WT +
Sbjct: 2507 CLSIMWTLI 2515
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 LSTVWTCV 9
L+ +WTC+
Sbjct: 2239 LAALWTCM 2246
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 CLSTVWTCV 9
CLS WT +
Sbjct: 2510 CLSITWTLI 2518
>sp|MATRX_PI2HT|MATRIX protein|Human parainfluenza 2 virus (strain
Query: 1 CLSTVWTCV 9
CL++VW V
Sbjct: 230 CLASVWIHV 238
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LSTVWTC 8
L ++WTC
Sbjct: 125 LPSLWTC 131
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 2 LSTVWTC 8
L ++WTC
Sbjct: 194 LPSLWTC 200
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LSTVWTC 8
L ++WTC
Sbjct: 194 LPSLWTC 200
>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)
Query: 1 CLSTVWTCVI 10
C+S+V CVI
Sbjct: 80 CISSVGGCVI 89
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LSTVWTC 8
L T WTC
Sbjct: 34 LETTWTC 40
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas)
Query: 2 LSTVWTC 8
L T WTC
Sbjct: 34 LETTWTC 40
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 STVWTCV 9
+ VWTC+
Sbjct: 160 AEVWTCL 166
>sp|PG165_VACCC|PROTEIN OPG165|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CLSTVWTCVI 10
C+S+V CVI
Sbjct: 75 CISSVGGCVI 84
>sp|VU8_HHV7J|PROTEIN U8|Human herpesvirus 7 (strain JI)
Query: 1 CLSTVW 6
CLS +W
Sbjct: 51 CLSLIW 56
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CLSTVW 6
CLS +W
Sbjct: 44 CLSIIW 49
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 CLSTVWT 7
C++T WT
Sbjct: 218 CVTTPWT 224
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 1 CLSTVW 6
C S+VW
Sbjct: 344 CFSSVW 349
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 5 VWTC 8
VWTC
Sbjct: 156 VWTC 159
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 CLSTVWT 7
C+ST W+
Sbjct: 219 CVSTPWS 225
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 CLSTVWT 7
C+ST W+
Sbjct: 219 CVSTPWS 225
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 CLSTVWT 7
C+ST W+
Sbjct: 218 CVSTPWS 224
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 LSTVWTCV 9
L +WTC+
Sbjct: 2266 LVALWTCM 2273
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CLSTVW 6
CLS +W
Sbjct: 44 CLSIIW 49
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 5 VWTCV 9
+WTC+
Sbjct: 718 LWTCI 722
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 5 VWTCV 9
+WTC+
Sbjct: 718 LWTCI 722
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 CLSTVWTCVI 10
C +W C+I
Sbjct: 1611 CWDEMWKCLI 1620
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 5 VWTCV 9
+WTC+
Sbjct: 718 LWTCI 722
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 5 VWTCV 9
+WTC+
Sbjct: 718 LWTCI 722
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 5 VWTCV 9
+WTC+
Sbjct: 718 LWTCI 722
>sp|A37_VAR67|PROTEIN A37 homolog|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CLSTVWTCVI 10
C+S++ CVI
Sbjct: 35 CISSIGRCVI 44
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 5 VWTCV 9
VW CV
Sbjct: 99 VWACV 103
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 5 VWTCV 9
VW CV
Sbjct: 97 VWACV 101
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 5 VWTCV 9
VW CV
Sbjct: 99 VWACV 103
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 5 VWTCV 9
VW CV
Sbjct: 129 VWACV 133
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 5 VWTCV 9
VW CV
Sbjct: 98 VWACV 102
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 5 VWTCV 9
VW CV
Sbjct: 133 VWACV 137
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 5 VWTCV 9
VW CV
Sbjct: 97 VWACV 101
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 5 VWTCV 9
VW CV
Sbjct: 98 VWACV 102
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 5 VWTCV 9
VW CV
Sbjct: 97 VWACV 101
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 5 VWTCV 9
VW CV
Sbjct: 99 VWACV 103
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 5 VWTCV 9
VW CV
Sbjct: 100 VWACV 104
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 5 VWTCV 9
VW CV
Sbjct: 98 VWACV 102
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 5 VWTCV 9
VW CV
Sbjct: 100 VWACV 104
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 5 VWTCV 9
VW CV
Sbjct: 106 VWACV 110
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 5 VWTCV 9
VW CV
Sbjct: 98 VWACV 102
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 5 VWTCV 9
VW CV
Sbjct: 99 VWACV 103
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 5 VWTCV 9
VW CV
Sbjct: 100 VWACV 104
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 5 VWTCV 9
VW CV
Sbjct: 97 VWACV 101
>sp|RL8A_HCMVM|PROTEIN RL8A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TVWTC 8
T WTC
Sbjct: 13 TSWTC 17
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 3 STVWTC 8
+ +WTC
Sbjct: 26 AEIWTC 31
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 6 WTCV 9
WTCV
Sbjct: 928 WTCV 931
>sp|FUS_PI3H4|FUSION glycoprotein F0|Human parainfluenza 3 virus (strain
Query: 1 CLSTVWTC 8
C++T TC
Sbjct: 387 CITTTCTC 394
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 CLSTVW 6
C+++VW
Sbjct: 232 CIASVW 237
>sp|MATRX_MUMPJ|MATRIX protein|Mumps virus genotype A (strain
Query: 1 CLSTVW 6
C+++VW
Sbjct: 232 CIASVW 237
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 1 CLSTVW 6
C+++VW
Sbjct: 232 CIASVW 237
>sp|MATRX_MUMPS|MATRIX protein|Mumps virus (strain SBL) (MuV)
Query: 1 CLSTVW 6
C+++VW
Sbjct: 232 CIASVW 237
>sp|MATRX_MUMPM|MATRIX protein|Mumps virus genotype B (strain
Query: 1 CLSTVW 6
C+++VW
Sbjct: 232 CIASVW 237
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 2 LSTVWTCV 9
+STVW V
Sbjct: 160 MSTVWNWV 167
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 2 LSTVWTCV 9
+STVW V
Sbjct: 160 MSTVWNWV 167
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 2 LSTVWTCV 9
+STVW V
Sbjct: 352 MSTVWNWV 359
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 2 LSTVWTCV 9
+STVW V
Sbjct: 352 MSTVWNWV 359
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 1 CLSTVW 6
CLS +W
Sbjct: 99 CLSIIW 104
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 5 VWTCV 9
VW CV
Sbjct: 126 VWACV 130
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 5 VWTCV 9
VW CV
Sbjct: 126 VWACV 130
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 CLSTVWTCV 9
C S V+ CV
Sbjct: 907 CTSGVYFCV 915
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 CLSTVWT 7
C++ WT
Sbjct: 1621 CITQAWT 1627
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 CLSTVWT 7
C++ WT
Sbjct: 1621 CITQAWT 1627
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 5 VWTCV 9
VW C+
Sbjct: 99 VWACI 103
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 5 VWTCV 9
VW C+
Sbjct: 96 VWACI 100
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 5 VWTCV 9
VW C+
Sbjct: 96 VWACI 100
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LSTVWT 7
LST WT
Sbjct: 978 LSTAWT 983
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LSTVWT 7
LST WT
Sbjct: 978 LSTAWT 983
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 TVWTCVI 10
T+W C+I
Sbjct: 1607 TMWKCMI 1613
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LSTVWT 7
LST WT
Sbjct: 978 LSTAWT 983
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LSTVWT 7
LST WT
Sbjct: 979 LSTAWT 984
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 LSTVWT 7
LST WT
Sbjct: 979 LSTAWT 984
>sp|MATRX_PIV5|MATRIX protein|Parainfluenza virus 5 (strain W3)
Query: 1 CLSTVW 6
CL +VW
Sbjct: 230 CLVSVW 235
173|Sequence|861|870|WTCVIIVCKM
>sp|GH_HHV8P|ENVELOPE glycoprotein H|Human herpesvirus 8 type P
Query: 1 WTCVIIVC 8
W C+ + C
Sbjct: 13 WRCISLTC 20
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CILVVC 195
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 1 WTCVIIVC 8
WT V+ VC
Sbjct: 25 WTPVLSVC 32
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 1 WTCVIIVC 8
W C+ ++C
Sbjct: 20 WVCMGVIC 27
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TCVIIVCK 9
TC + CK
Sbjct: 115 TCAMFTCK 122
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TCVIIVCK 9
TC + CK
Sbjct: 395 TCAMFTCK 402
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TCVIIVCK 9
TC + CK
Sbjct: 395 TCAMFTCK 402
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TCVIIVCK 9
TC + CK
Sbjct: 395 TCAMFTCK 402
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 TCVIIVCK 9
TC + CK
Sbjct: 395 TCAMFTCK 402
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 TCVIIVCK 9
TC + CK
Sbjct: 395 TCAMFTCK 402
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 3 CVIIVC 8
C+++VC
Sbjct: 190 CLLVVC 195
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 WTCVIIVC 8
WT II C
Sbjct: 1258 WTRDIIAC 1265
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 WTCVIIVC 8
WT II C
Sbjct: 1258 WTRDIIAC 1265
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 3 CVIIVCK 9
C+ IVC+
Sbjct: 338 CIRIVCE 344
174|Sequence|866|875|IVCKMLYQLK
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 150 VVCMYLYQL 158
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 151 VVCMYLYQL 159
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 151 VVCMYLYQL 159
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 151 VVCMYLYQL 159
>sp|TAX_HTLV2|PROTEIN Tax-2|Human T-cell leukemia virus 2
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 151 VVCLYLYQL 159
>sp|TAX_HTL3P|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 151 VVCLYLYQL 159
>sp|TAX_HTL32|PROTEIN Tax-3|Human T-cell leukemia virus 3
Query: 1 IVCKMLYQL 9
+VC LYQL
Sbjct: 151 VVCLYLYQL 159
>sp|TRM1_VZVD|TRIPARTITE terminase subunit 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IVCKMLYQL 9
+ C+ LY+L
Sbjct: 33 VACRFLYRL 41
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 VCKMLYQL 9
+CK+L+++
Sbjct: 140 ICKLLHEI 147
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 IVCKML 6
++CKML
Sbjct: 354 LICKML 359
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 1 IVCKMLYQ 8
++CK LY+
Sbjct: 261 LICKHLYK 268
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VCKMLYQ 8
+CK +YQ
Sbjct: 672 ICKEVYQ 678
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 2 VCKMLYQ 8
+CK +YQ
Sbjct: 672 ICKEVYQ 678
175|Sequence|871|880|LYQLKVVNPQ
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 LYQLKVVNP 9
LY ++V+NP
Sbjct: 1153 LYSVRVINP 1161
>sp|NCAP_TOSV|NUCLEOPROTEIN virus (Tos)
Query: 1 LYQLKVVNP 9
+YQLK NP
Sbjct: 94 VYQLKEGNP 102
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 YQLKVVNPQ 10
+ KV+NPQ
Sbjct: 1179 HTCKVINPQ 1187
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 YQLKVVNPQ 10
+ KV+NPQ
Sbjct: 1179 HTCKVINPQ 1187
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 1 LYQLKVVNP 9
LYQ ++V P
Sbjct: 266 LYQPEIVEP 274
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 3 QLKVVNP 9
Q+KV NP
Sbjct: 230 QIKVANP 236
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 YQLKVVNPQ 10
+QLK ++P+
Sbjct: 631 HQLKSIDPE 639
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 YQLKVVNPQ 10
+QLK ++P+
Sbjct: 631 HQLKSIDPE 639
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 LYQLKVVNPQ 10
LY+LK+ P
Sbjct: 23 LYELKIECPH 32
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 LYQLKVVNPQ 10
LY+LK+ P
Sbjct: 23 LYELKIECPH 32
>sp|S1_FOAMV|PUTATIVE uncharacterized protein S1|Human spumaretrovirus (SFVcpz(hu))
Query: 4 LKVVNPQ 10
LKV+NP+
Sbjct: 59 LKVLNPR 65
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 YQLKVVNPQ 10
+QLK ++P+
Sbjct: 631 HQLKSIDPE 639
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 3 QLKVVNP 9
Q+KV NP
Sbjct: 234 QVKVTNP 240
>sp|VL2_HPV82|MINOR capsid protein L2|Human papillomavirus 82
Query: 3 QLKVVNP 9
Q+KV NP
Sbjct: 235 QVKVTNP 241
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 3 QLKVVNP 9
Q+KVV+P
Sbjct: 234 QVKVVDP 240
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 3 QLKVVNP 9
Q+KVV+P
Sbjct: 233 QVKVVDP 239
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 YQLKVVNP 9
YQ VV+P
Sbjct: 525 YQTSVVSP 532
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 LYQLKVVNP 9
+ Q+KVV+P
Sbjct: 237 IQQVKVVDP 245
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 3 QLKVVNP 9
Q+KVV+P
Sbjct: 234 QVKVVDP 240
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 3 QLKVVNP 9
Q+KVV+P
Sbjct: 234 QVKVVDP 240
176|Sequence|876|885|VVNPQEYSSN
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 PQEYSS 9
PQE+SS
Sbjct: 157 PQEFSS 162
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 PQEYSS 9
PQE+SS
Sbjct: 157 PQEFSS 162
>sp|M1_INBLE|MATRIX protein 1|Influenza B virus (strain B/Lee/1940)
Query: 2 VNPQEYS 8
+NP+ YS
Sbjct: 133 LNPENYS 139
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 VNPQEYSS 9
V+P+EY S
Sbjct: 1652 VSPREYKS 1659
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 4 PQEYSS 9
P+EYSS
Sbjct: 376 PKEYSS 381
>sp|PG117_VARV|UNCOATING factor OPG117|Variola virus
Query: 4 PQEYSS 9
P+EYSS
Sbjct: 376 PKEYSS 381
>sp|PG117_VAR67|UNCOATING factor OPG117|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 PQEYSS 9
P+EYSS
Sbjct: 376 PKEYSS 381
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PQEYSS 9
P+EYSS
Sbjct: 376 PKEYSS 381
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 3 NPQEYSSN 10
NP+ YS N
Sbjct: 1232 NPKSYSPN 1239
177|Sequence|881|890|EYSSNCTEPF
>sp|U8_HHV6U|PROTEIN U8|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EYSSNCTEP 9
+Y S CT P
Sbjct: 274 DYESKCTRP 282
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 1 EYSSNCTEP 9
+Y S CT P
Sbjct: 329 DYESKCTRP 337
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EYSSNCTEPF 10
+Y S CT P
Sbjct: 274 DYESKCTRPI 283
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEPF 10
NCT P+
Sbjct: 292 NCTRPY 297
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEPF 10
NCT P+
Sbjct: 290 NCTRPY 295
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEPF 10
NCT P+
Sbjct: 297 NCTRPY 302
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEPF 10
NCT P+
Sbjct: 296 NCTRPY 301
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 SSNCTEP 9
S NCT P
Sbjct: 280 SINCTRP 286
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 SSNCTEP 9
SS+CT P
Sbjct: 1965 SSDCTAP 1971
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 5 NCTEPF 10
NCT PF
Sbjct: 490 NCTGPF 495
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 5 NCTEPF 10
NCT PF
Sbjct: 490 NCTGPF 495
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 5 NCTEPF 10
NCT PF
Sbjct: 490 NCTGPF 495
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 EYSSNCTEPF 10
+ S +CT PF
Sbjct: 445 KISHSCTHPF 454
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 EYSSNCTEPF 10
+ S +CT PF
Sbjct: 445 KISHSCTHPF 454
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 YSSNCTEPF 10
YSS+ T P+
Sbjct: 1181 YSSDGTNPY 1189
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 EYSSNCTEPF 10
+ S CT PF
Sbjct: 445 KISHTCTHPF 454
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 YSSNCTEPF 10
+ ++CT P+
Sbjct: 85 HCTSCTHPY 93
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YSSNCTEPF 10
+ ++CT P+
Sbjct: 85 HCTSCTHPY 93
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 3 SSNCTEPF 10
S +CT PF
Sbjct: 447 SHSCTHPF 454
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 300 NCTRP 304
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 307 NCTRP 311
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 306 NCTRP 310
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 293 NCTRP 297
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 291 NCTRP 295
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 293 NCTRP 297
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 298 NCTRP 302
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 293 NCTRP 297
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 300 NCTRP 304
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 297 NCTRP 301
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 297 NCTRP 301
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|VU54_HHV7J|PROTEIN U54|Human herpesvirus 7 (strain JI)
Query: 3 SSNCTEPF 10
+SN T+PF
Sbjct: 261 NSNTTDPF 268
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 SSNCTEP 9
SS CT P
Sbjct: 1965 SSECTTP 1971
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 307 NCTRP 311
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 293 NCTRP 297
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 296 NCTRP 300
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 300 NCTRP 304
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 308 NCTRP 312
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 SSNCTEP 9
SS CT P
Sbjct: 1965 SSECTTP 1971
>sp|PG065_MONPV|RNA-BINDING protein OPG065|Monkeypox virus (MPXV)
Query: 2 YSSNCTEP 9
YSSN T P
Sbjct: 20 YSSNDTPP 27
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 295 NCTRP 299
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 286 NCTRP 290
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 303 NCTRP 307
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 300 NCTRP 304
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 284 NCTRP 288
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 2 YSSNCTEPF 10
YS+ C +P+
Sbjct: 234 YSALCRQPY 242
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 6 CTEPF 10
CT PF
Sbjct: 111 CTSPF 115
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NCTEP 9
NCT P
Sbjct: 297 NCTRP 301
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 YSSNCTEPF 10
++S C +P+
Sbjct: 131 WNSECMQPY 139
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 YSSNCTEPF 10
++S C +P+
Sbjct: 131 WNSECMQPY 139
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 YSSNCTEPF 10
++S C +P+
Sbjct: 131 WNSECMQPY 139
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 YSSNCTEPF 10
++S C +P+
Sbjct: 131 WNSECMQPY 139
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 YSSNCTEPF 10
++S C +P+
Sbjct: 131 WNSECMQPY 139
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 YSSNCT 7
YS NCT
Sbjct: 138 YSDNCT 143
>sp|NS8_SARS2|ORF8 protein|Severe acute respiratory syndrome coronavirus
Query: 2 YSSNCTEP 9
++ NC EP
Sbjct: 86 FTINCQEP 93
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 YSSNCTE 8
+S+NCT+
Sbjct: 785 WSTNCTK 791
178|Sequence|886|895|CTEPFPNSTN
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 TEPFPNS 8
T+PFP+S
Sbjct: 1827 TDPFPDS 1833
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 TEPFPNS 8
T+PFP+S
Sbjct: 1827 TDPFPDS 1833
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 TEPFPNS 8
T+PFP+S
Sbjct: 1827 TDPFPDS 1833
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 TEPFPNS 8
T+PFP+S
Sbjct: 1827 TDPFPDS 1833
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 TEPFPNS 8
T+PFP+S
Sbjct: 1820 TDPFPDS 1826
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TEPFPNSTN 10
T+PFP S +
Sbjct: 1796 TDPFPQSNS 1804
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TEPFPNSTN 10
T+PFP S +
Sbjct: 1796 TDPFPQSNS 1804
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TEPFPNSTN 10
T+PFP S +
Sbjct: 1796 TDPFPQSNS 1804
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TEPFPNSTN 10
T+PFP S +
Sbjct: 1796 TDPFPQSNS 1804
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 TEPFPNSTN 10
T+PFP S +
Sbjct: 1796 TDPFPQSNS 1804
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 TEPFPNS 8
+EPFP S
Sbjct: 1817 SEPFPES 1823
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 CTEPFP 6
CTEP P
Sbjct: 2077 CTEPAP 2082
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 CTEPFP 6
CTEP P
Sbjct: 2076 CTEPTP 2081
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 TEPFPNSTN 10
++PFP S +
Sbjct: 1828 SDPFPESNS 1836
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 EPFPNSTN 10
+PFP+S +
Sbjct: 1821 DPFPDSNS 1828
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 EPFPNSTN 10
+PFP+S +
Sbjct: 1823 DPFPDSNS 1830
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 TEPFPNS 8
++PFP S
Sbjct: 1824 SDPFPES 1830
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 TEPFPNS 8
++PFP S
Sbjct: 1828 SDPFPES 1834
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 3 EPFPNSTN 10
E FP +TN
Sbjct: 303 EGFPTATN 310
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 3 EPFPNSTN 10
E FP +TN
Sbjct: 303 EGFPTATN 310
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 3 EPFPNSTN 10
E FP +TN
Sbjct: 303 EGFPTATN 310
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 EPFPNSTN 10
EP NS+N
Sbjct: 182 EPIKNSSN 189
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 TEPFPNST 9
T+P PN++
Sbjct: 1894 TQPLPNAS 1901
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 TEPFPNST 9
T+P PN++
Sbjct: 1894 TQPLPNAS 1901
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 4 PFPNSTN 10
PFP TN
Sbjct: 585 PFPLDTN 591
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CTEPFPNST 9
CT P N+T
Sbjct: 296 CTRPNNNTT 304
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 CTEPFPNSTN 10
CT+ N+TN
Sbjct: 130 CTDYLGNATN 139
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TEPFPNST 9
T P P ST
Sbjct: 1802 TSPLPTST 1809
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TEPFPNST 9
T P P ST
Sbjct: 1802 TSPLPTST 1809
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 TEPFPNST 9
T P P ST
Sbjct: 1802 TSPLPTST 1809
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 4 PFPNSTN 10
PFP TN
Sbjct: 573 PFPIDTN 579
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 CTEPFPNSTN 10
CT P P + N
Sbjct: 1041 CTGPCPANIN 1050
179|Sequence|891|900|PNSTNLLPTE
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 PNSTNLLPTE 10
P+ T LLPTE
Sbjct: 379 PSKTTLLPTE 388
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 NSTNLLP 8
N TN+LP
Sbjct: 883 NGTNILP 889
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 NSTNLLP 8
N TN+LP
Sbjct: 883 NGTNILP 889
>sp|ORF9B_SARS|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 1 PNSTNLLP 8
PN TN++P
Sbjct: 3 PNQTNVVP 10
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NSTNLLPTE 10
S NL+PTE
Sbjct: 252 QSLNLIPTE 260
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 2 NSTNLLPTE 10
S NL+PTE
Sbjct: 252 QSLNLIPTE 260
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 PNSTNLLP 8
PN TNL P
Sbjct: 317 PNITNLCP 324
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 PNSTNLLP 8
PN TNL P
Sbjct: 330 PNITNLCP 337
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 PNSTNLLP 8
PN TNL P
Sbjct: 565 PNRTNLGP 572
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 STNLLPT 9
+TNL+PT
Sbjct: 180 NTNLVPT 186
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 PNSTNLLPTE 10
PN+ NL+ E
Sbjct: 2067 PNARNLIDIE 2076
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 PNSTNLLPTE 10
PN+ NL+ E
Sbjct: 2067 PNARNLIDIE 2076
180|Sequence|896|905|LLPTEISQSL
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLPTEIS 7
LLPTE+S
Sbjct: 96 LLPTELS 102
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 LLPTEIS 7
LLPTE+S
Sbjct: 96 LLPTELS 102
>sp|SCP_HCMVA|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 2 LPTEISQS 9
LPTEIS++
Sbjct: 28 LPTEISEA 35
>sp|SCP_HCMVM|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 2 LPTEISQS 9
LPTEIS++
Sbjct: 28 LPTEISEA 35
>sp|NEF_HV2D1|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 LLPTEISQ 8
L+P +ISQ
Sbjct: 177 LVPVDISQ 184
181|Sequence|901|910|ISQSLLYRGP
>sp|GK_HHV2H|ENVELOPE glycoprotein K|Human herpesvirus 2 (strain HG52)
Query: 1 ISQSLLYRGP 10
I+Q+LL+ GP
Sbjct: 57 INQTLLFLGP 66
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 4 SLLYRGP 10
SL+Y GP
Sbjct: 445 SLMYTGP 451
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 SLLYRGP 10
SL+Y GP
Sbjct: 445 SLMYTGP 451
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 ISQSLLYRGP 10
IS L+ RGP
Sbjct: 1129 ISNVLIERGP 1138
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 SQSLLYRGP 10
S +LL+ GP
Sbjct: 853 SDTLLFLGP 861
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 SQSLLYRGP 10
S +LL+ GP
Sbjct: 38 SDTLLFLGP 46
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 SQSLLYRGP 10
S +LL+ GP
Sbjct: 846 SDTLLFLGP 854
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 SQSLLYRGP 10
S +LL+ GP
Sbjct: 853 SDTLLFLGP 861
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 SQSLLYRGP 10
S +LYR P
Sbjct: 1378 SPEVLYRAP 1386
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 SQSLLYRGP 10
S +LL+ GP
Sbjct: 853 SDTLLFLGP 861
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 SQSLLYRGP 10
S +LL+ GP
Sbjct: 853 SDTLLFLGP 861
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2470 SLLWNGP 2476
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2469 SLLWNGP 2475
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2470 SLLWNGP 2476
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2469 SLLWNGP 2475
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2469 SLLWNGP 2475
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2470 SLLWNGP 2476
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2469 SLLWNGP 2475
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2469 SLLWNGP 2475
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 SLLYRGP 10
SLL+ GP
Sbjct: 2469 SLLWNGP 2475
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 ISQSLLYRGP 10
ISQ ++GP
Sbjct: 563 ISQQNFFQGP 572
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 ISQSLLYRGP 10
ISQ ++GP
Sbjct: 563 ISQQNFFQGP 572
>sp|VE1_HPV65|REPLICATION protein E1|Human papillomavirus 65
Query: 1 ISQSLLYRG 9
ISQ L Y+G
Sbjct: 392 ISQFLKYQG 400
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 1 ISQSLLYRG 9
ISQ L Y+G
Sbjct: 393 ISQFLKYQG 401
182|Sequence|906|915|LYRGPVDPAN
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 621 LYRGPLD 627
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 628 LYRGPLD 634
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 627 LYRGPLD 633
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 606 LYRGPLD 612
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 LYRGPVD 7
LYRGP+D
Sbjct: 131 LYRGPLD 137
>sp|VP22_HHV2H|TEGUMENT protein VP22|Human herpesvirus 2 (strain HG52)
Query: 1 LYRGPVDPAN 10
LY GPV PA+
Sbjct: 22 LYYGPVSPAD 31
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 LYRGPVD 7
L++GP+D
Sbjct: 424 LFKGPID 430
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 LYRGPVD 7
L++GP+D
Sbjct: 425 LFKGPID 431
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 LYRGPVD 7
L++GP+D
Sbjct: 425 LFKGPID 431
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 GPVDP 8
GPVDP
Sbjct: 1554 GPVDP 1558
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 GPVDP 8
GPVDP
Sbjct: 1554 GPVDP 1558
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 4 GPVDP 8
GPVDP
Sbjct: 535 GPVDP 539
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 RGPVDPA 9
R P+DPA
Sbjct: 395 RSPLDPA 401
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RGPVDPA 9
R P+DPA
Sbjct: 395 RSPLDPA 401
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 RGPVDPA 9
R P+DPA
Sbjct: 395 RSPLDPA 401
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 2 YRGPVDPAN 10
Y GP+ P+N
Sbjct: 879 YIGPLPPSN 887
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 2 YRGPVDPAN 10
Y GP+ P+N
Sbjct: 879 YIGPLPPSN 887
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 1 LYRGPV 6
+Y+GPV
Sbjct: 8 IYKGPV 13
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LYRGPV 6
+Y+GPV
Sbjct: 8 IYKGPV 13
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 YRGPVDP 8
Y GP+DP
Sbjct: 127 YLGPMDP 133
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 5 PVDPA 9
PVDPA
Sbjct: 385 PVDPA 389
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 5 PVDPA 9
PVDPA
Sbjct: 385 PVDPA 389
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 LYRGPVD 7
YR PVD
Sbjct: 406 FYREPVD 412
>sp|CAP9_ADE07|HEXON-INTERLACING protein IX|Human adenovirus B serotype 7
Query: 5 PVDPAN 10
PV PAN
Sbjct: 39 PVQPAN 44
>sp|CAP9_ADE03|HEXON-INTERLACING protein IX|Human adenovirus B serotype 3
Query: 5 PVDPAN 10
PV PAN
Sbjct: 39 PVQPAN 44
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 3 RGPVDP 8
RGP DP
Sbjct: 107 RGPSDP 112
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 4 GPVDPAN 10
GP+ PAN
Sbjct: 470 GPLGPAN 476
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 5 PVDPAN 10
PVDPA+
Sbjct: 744 PVDPAD 749
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 5 PVDPAN 10
PVDPA+
Sbjct: 744 PVDPAD 749
>sp|SCAF_HCMVM|CAPSID scaffolding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LYRGPVDP 8
+ RGPV P
Sbjct: 107 VSRGPVSP 114
>sp|SCAF_HCMVA|CAPSID scaffolding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LYRGPVDP 8
+ RGPV P
Sbjct: 107 VSRGPVSP 114
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 PVDPA 9
PVDPA
Sbjct: 147 PVDPA 151
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LYRGPV 6
LY+GP+
Sbjct: 84 LYKGPI 89
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 1 LYRGPV 6
LY+GP+
Sbjct: 84 LYKGPI 89
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 1 LYRGPV 6
LY+GP+
Sbjct: 84 LYKGPI 89
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LYRGPV 6
LY+GP+
Sbjct: 84 LYKGPI 89
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 5 PVDPA 9
PVDPA
Sbjct: 156 PVDPA 160
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LYRGPVD 7
Y+GPV+
Sbjct: 568 FYQGPVE 574
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 4 GPVDPAN 10
PVDPA+
Sbjct: 108 APVDPAS 114
183|Sequence|911|920|VDPANWFGVR
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 DPANWFG 8
DPA WFG
Sbjct: 1587 DPAGWFG 1593
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DPANWFGV 9
+PANWF V
Sbjct: 77 NPANWFLV 84
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169)
Query: 2 DPANWFGV 9
+PANWF V
Sbjct: 77 NPANWFLV 84
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 DPANWFGV 9
DP NW +
Sbjct: 1893 DPKNWVSI 1900
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 DPANWFGV 9
DP NW +
Sbjct: 1806 DPKNWVSI 1813
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 DPANWFG 8
D NWFG
Sbjct: 90 DMHNWFG 96
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 3 PANWF 7
P NWF
Sbjct: 231 PENWF 235
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 5 NWFGV 9
NWFG+
Sbjct: 663 NWFGI 667
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VDPANW 6
++PANW
Sbjct: 637 MNPANW 642
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 1 VDPANW 6
++PANW
Sbjct: 636 MNPANW 641
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 3 PANWF 7
P NWF
Sbjct: 231 PDNWF 235
>sp|US15_HCMVM|MEMBRANE protein US15|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PANWF 7
PA WF
Sbjct: 67 PATWF 71
>sp|US15_HCMVA|UNCHARACTERIZED protein HVLF3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PANWF 7
PA WF
Sbjct: 67 PATWF 71
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 3 PANWF 7
P NWF
Sbjct: 231 PDNWF 235
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 3 PANWF 7
P NWF
Sbjct: 231 PDNWF 235
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 6 WFGVR 10
WFG R
Sbjct: 1530 WFGTR 1534
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 1 VDPANWFGVR 10
+DPA GVR
Sbjct: 178 LDPATREGVR 187
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 PANWFGV 9
P NW G+
Sbjct: 1300 PMNWLGL 1306
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 DPANWF 7
DP +WF
Sbjct: 142 DPFSWF 147
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 NWFG 8
NWFG
Sbjct: 93 NWFG 96
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 DPANWF 7
DP +WF
Sbjct: 142 DPFSWF 147
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 DPANWF 7
DP +WF
Sbjct: 142 DPFSWF 147
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 DPANW 6
DPA+W
Sbjct: 379 DPAHW 383
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 2 DPANWF 7
DP WF
Sbjct: 965 DPFGWF 970
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 2 DPANW 6
DPA+W
Sbjct: 379 DPAHW 383
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 2 DPANW 6
DPA+W
Sbjct: 379 DPAHW 383
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 2 DPANW 6
DP NW
Sbjct: 246 DPINW 250
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DPANW 6
DP NW
Sbjct: 246 DPINW 250
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 2 DPANWFG 8
DP W G
Sbjct: 143 DPGTWKG 149
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 DPANWFGV 9
+PA W V
Sbjct: 418 EPARWLAV 425
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 2 DPANWF 7
+PA WF
Sbjct: 142 EPAYWF 147
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 DPANWFG 8
DP N FG
Sbjct: 424 DPPNVFG 430
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 ANWFG 8
NWFG
Sbjct: 548 GNWFG 552
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 ANWFG 8
NWFG
Sbjct: 548 GNWFG 552
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 ANWFG 8
NWFG
Sbjct: 547 GNWFG 551
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 4 ANWFGVR 10
++W G+R
Sbjct: 187 SHWMGIR 193
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PANWF 7
P NWF
Sbjct: 66 PHNWF 70
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PANWF 7
P NWF
Sbjct: 66 PHNWF 70
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VDPANWFGV 9
V PA W G
Sbjct: 352 VLPARWLGC 360
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VDPANWFG 8
V PA W G
Sbjct: 352 VLPARWLG 359
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VDPANWFG 8
V PA W G
Sbjct: 352 VLPARWLG 359
184|Sequence|916|925|WFGVRKGFPN
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 VRKGFPN 10
VRK FPN
Sbjct: 720 VRKAFPN 726
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 VRKGFPN 10
VRK FPN
Sbjct: 720 VRKTFPN 726
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 GVRKGFPN 10
G+RKGF N
Sbjct: 187 GLRKGFFN 194
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 GVRKGFPN 10
G+RKGF N
Sbjct: 187 GLRKGFFN 194
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 GVRKGFPN 10
G+RKGF N
Sbjct: 187 GLRKGFFN 194
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 6 KGFPN 10
KGFPN
Sbjct: 303 KGFPN 307
>sp|NSS_SFSV|NON-STRUCTURAL protein NS-S|Sandfly fever sicilian virus (SFS)
Query: 5 RKGFPN 10
RKG PN
Sbjct: 113 RKGLPN 118
>sp|VE6_HPV57|PROTEIN E6|Human papillomavirus 57
Query: 5 RKGFP 9
RKGFP
Sbjct: 54 RKGFP 58
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 3 GVRKGF 8
G+RKGF
Sbjct: 186 GLRKGF 191
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 WFGVRKGFP 9
W+ V+K P
Sbjct: 237 WYNVKKYIP 245
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 WFGVRKGFP 9
W+ V+K P
Sbjct: 237 WYNVKKYIP 245
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 WFGVRK 6
WF +RK
Sbjct: 6631 WFAMRK 6636
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 WFGVRK 6
WF +RK
Sbjct: 6651 WFAMRK 6656
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 WFGVRK 6
WF +RK
Sbjct: 6681 WFAMRK 6686
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 FGVRKGFP 9
FG+ KG P
Sbjct: 2343 FGMGKGMP 2350
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 2 FGVRKGFP 9
FG+ G+P
Sbjct: 2346 FGLNSGYP 2353
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 FGVRKGFP 9
FG+ KG P
Sbjct: 2347 FGMGKGMP 2354
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 FGVRKGFP 9
FG+ KG P
Sbjct: 2347 FGMGKGMP 2354
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 FGVRKGFP 9
FG+ KG P
Sbjct: 2345 FGLGKGMP 2352
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 FGVRKGFP 9
FG+ G+P
Sbjct: 2344 FGLSAGYP 2351
185|Sequence|921|930|KGFPNLGYIQ
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 FPNLGY 8
FPNLGY
Sbjct: 37 FPNLGY 42
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 FPNLGY 8
FPNLGY
Sbjct: 37 FPNLGY 42
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 FPNLGY 8
FPNLGY
Sbjct: 37 FPNLGY 42
>sp|US14_HCMVM|MEMBRANE protein US14|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GFPNLGY 8
G+P+LGY
Sbjct: 89 GYPSLGY 95
>sp|US14_HCMVA|UNCHARACTERIZED protein HVLF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GFPNLGY 8
G+P+LGY
Sbjct: 89 GYPSLGY 95
>sp|GM_HHV7J|ENVELOPE glycoprotein M|Human herpesvirus 7 (strain JI)
Query: 3 FPNLGY 8
FPNLG+
Sbjct: 37 FPNLGF 42
>sp|GM_HHV6Z|ENVELOPE glycoprotein M|Human herpesvirus 6B (strain Z29)
Query: 3 FPNLGY 8
FPNLG+
Sbjct: 37 FPNLGF 42
>sp|GM_HHV6U|ENVELOPE glycoprotein M|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FPNLGY 8
FPNLG+
Sbjct: 37 FPNLGF 42
>sp|GM_HCMVM|ENVELOPE glycoprotein M|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 FPNLGY 8
FP+LGY
Sbjct: 37 FPHLGY 42
>sp|GM_HCMVA|ENVELOPE glycoprotein M|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FPNLGY 8
FP+LGY
Sbjct: 37 FPHLGY 42
>sp|DPOL_HHV8P|DNA polymerase catalytic subunit|Human herpesvirus 8 type P
Query: 1 KGFPN 5
KGFPN
Sbjct: 303 KGFPN 307
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 KGFPNLGYI 9
KG LGYI
Sbjct: 3036 KGLQKLGYI 3044
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 KGFPNLGYI 9
KG LGYI
Sbjct: 3032 KGLQKLGYI 3040
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 GFPNLGYIQ 10
FP L YI+
Sbjct: 475 AFPGLKYIE 483
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FPNLGYIQ 10
FP L Y++
Sbjct: 96 FPELAYVR 103
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 5 NLGYIQ 10
NLGY+Q
Sbjct: 413 NLGYLQ 418
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 4 PNLGYIQ 10
P+LGY++
Sbjct: 189 PDLGYMR 195
>sp|CAPSD_NVN68|CAPSID protein VP1|Norovirus (strain Human/NoV/United
Query: 2 GFPNLG 7
GFP+LG
Sbjct: 319 GFPDLG 324
>sp|NCAP_CVHNL|NUCLEOPROTEIN coronavirus NL63 (HCoV-NL63)
Query: 1 KGFPNLG 7
KGFP L
Sbjct: 272 KGFPQLA 278
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 GFPNLGYI 9
G PN YI
Sbjct: 530 GAPNTAYI 537
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 GFPNLGYI 9
G PN YI
Sbjct: 530 GAPNTAYI 537
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 GFPNLGYI 9
G PN YI
Sbjct: 530 GAPNTAYI 537
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 2 GFPNLGY 8
GF N+G+
Sbjct: 50 GFANIGH 56
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 KGFPNLGYI 9
+GF L YI
Sbjct: 180 QGFDQLSYI 188
186|Sequence|926|935|LGYIQNHLQV
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LGYIQNHLQV 10
L YI++HL V
Sbjct: 3127 LSYIRSHLSV 3136
>sp|K1_HHV8P|PROTEIN K1|Human herpesvirus 8 type P
Query: 3 YIQNHLQV 10
YIQ HL V
Sbjct: 214 YIQEHLLV 221
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 YIQNHLQV 10
YI H QV
Sbjct: 1085 YISKHFQV 1092
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 YIQNHLQV 10
YI H QV
Sbjct: 1086 YISKHFQV 1093
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 GYIQNHLQV 10
GY+Q H +
Sbjct: 4810 GYLQKHFSM 4818
>sp|NEF_HV2NZ|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 GYIQNH 7
GY+Q+H
Sbjct: 38 GYLQSH 43
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 LGYIQN 6
LGYI+N
Sbjct: 1227 LGYIKN 1232
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GYIQNHLQV 10
GY HLQ+
Sbjct: 824 GYAPVHLQI 832
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GYIQNHLQV 10
GY HLQ+
Sbjct: 824 GYAPVHLQI 832
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GYIQNHLQV 10
GY HLQ+
Sbjct: 822 GYAPVHLQI 830
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 GYIQNHLQV 10
GY HLQ+
Sbjct: 824 GYAPVHLQI 832
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 GYIQNHLQV 10
GY HLQ+
Sbjct: 821 GYAPVHLQI 829
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 4 IQNHLQV 10
+QNHL +
Sbjct: 84 MQNHLMI 90
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 4 IQNHLQV 10
+QNHL +
Sbjct: 84 MQNHLMI 90
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 4 IQNHLQV 10
+ NH+QV
Sbjct: 1573 LNNHIQV 1579
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 4 IQNHLQV 10
+ NH+QV
Sbjct: 1573 LNNHIQV 1579
187|Sequence|931|940|NHLQVLLLLV
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NHLQVLLLLV 10
NHL +LLLL+
Sbjct: 6 NHLFILLLLI 15
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 NHLQVLLLLV 10
N+L V LLL+
Sbjct: 6 NYLLVTLLLI 15
188|Sequence|936|945|LLLLVFEAIV
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 2 LLLVFEAIV 10
LLL+F+A++
Sbjct: 344 LLLIFDALI 352
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 LLLLVFEAIV 10
L L+FEA+V
Sbjct: 236 LARLLFEAVV 245
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 LLLLVFEAIV 10
L L+FEA+V
Sbjct: 236 LARLLFEAVV 245
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 4 LVFEAIV 10
L+FEA+V
Sbjct: 239 LLFEAVV 245
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 4 LVFEAIV 10
L+FEA+V
Sbjct: 239 LLFEAVV 245
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 LVFEAIV 10
L+FEA+V
Sbjct: 239 LLFEAVV 245
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 LLLVFEAIV 10
LLL+F+ ++
Sbjct: 345 LLLIFDVLI 353
189|Sequence|941|950|FEAIVYRRQE
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FEAIVYRRQE 10
EAI+ ++QE
Sbjct: 998 LEAIISQKQE 1007
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FEAIVYRRQE 10
EAI+ ++QE
Sbjct: 998 LEAIISQKQE 1007
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FEAIVYRRQE 10
EAI+ ++QE
Sbjct: 998 LEAIISQKQE 1007
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 1 FEAIVYRR 8
EAI+Y+R
Sbjct: 147 LEAIIYQR 154
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 1 FEAIVYRR 8
EAI+Y+R
Sbjct: 147 LEAIIYQR 154
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 1 FEAIVYRR 8
EAI+Y+R
Sbjct: 147 LEAIIYQR 154
190|Sequence|946|955|YRRQEHYRRQ
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 1 YRRQEHYRR 9
YR+Q+ YR+
Sbjct: 153 YRKQQMYRK 161
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 2 RRQEHYRRQ 10
R QEH RRQ
Sbjct: 492 RLQEHRRRQ 500
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 YRRQEHYRR 9
+RR H+R+
Sbjct: 317 FRRLSHFRK 325
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RRQEHYRRQ 10
R QEH RRQ
Sbjct: 492 RLQEHRRRQ 500
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RRQEHYRRQ 10
R+ EH++RQ
Sbjct: 780 RQSEHHKRQ 788
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 1 YRRQEHY 7
++R+EHY
Sbjct: 1804 WKREEHY 1810
>sp|IRS1_HCMVA|PROTEIN IRS1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RRQEHYRRQ 10
R+ EH++RQ
Sbjct: 779 RQSEHHKRQ 787
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 YRRQEHY 7
++R+EHY
Sbjct: 1805 WKREEHY 1811
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 YRRQEHYRR 9
YR+ H+R+
Sbjct: 250 YRKSFHFRK 258
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 EHYRRQ 10
EHYR+
Sbjct: 254 EHYRKH 259
191|Sequence|951|960|HYRRQHQLAP
>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HYRRQHQLAP 10
H+R QHQ P
Sbjct: 124 HFRAQHQDCP 133
>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HYRRQHQLAP 10
H+R QHQ P
Sbjct: 124 HFRAQHQDCP 133
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 2 YRRQH 6
YRRQH
Sbjct: 395 YRRQH 399
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 YRRQH 6
YRRQH
Sbjct: 395 YRRQH 399
>sp|Y215_ADE02|UNCHARACTERIZED protein F-215|Human adenovirus C serotype 2
Query: 1 HYRRQHQLAP 10
+RR+HQ AP
Sbjct: 181 SHRRRHQPAP 190
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HYRRQH 6
HY R+H
Sbjct: 347 HYDRKH 352
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RQHQLA 9
RQHQLA
Sbjct: 180 RQHQLA 185
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RQHQLA 9
RQHQLA
Sbjct: 180 RQHQLA 185
>sp|VE6_HPV53|PROTEIN E6|Human papillomavirus type 53
Query: 2 YRRQHQLAP 10
YR QH L P
Sbjct: 108 YRCQHPLTP 116
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 4 RQHQLAP 10
R H LAP
Sbjct: 431 RDHPLAP 437
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 HYRRQH 6
H+RR H
Sbjct: 1559 HHRRPH 1564
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 5 QHQLAP 10
QHQL P
Sbjct: 806 QHQLVP 811
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 4 RQHQLAP 10
R HQL+P
Sbjct: 434 RPHQLSP 440
192|Sequence|956|965|HQLAPLPAQA
>sp|VEMP_CVHNL|ENVELOPE small membrane protein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 QLAPLPAQ 9
Q+AP+PA+
Sbjct: 66 QIAPVPAE 73
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 2 QLAPLPA 8
+L PLPA
Sbjct: 14 ELCPLPA 20
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 QLAPLPAQA 10
Q PLP QA
Sbjct: 3057 QFGPLPVQA 3065
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 QLAPLPAQA 10
+L PLPA A
Sbjct: 2952 KLTPLPAAA 2960
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 LAPLPAQ 9
APLP Q
Sbjct: 1850 FAPLPTQ 1856
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 LAPLPAQ 9
APLP Q
Sbjct: 1850 FAPLPTQ 1856
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 LAPLPAQ 9
APLP Q
Sbjct: 1850 FAPLPTQ 1856
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 4 APLPAQ 9
APLP Q
Sbjct: 1850 APLPTQ 1855
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 4 APLPAQA 10
+PLP+QA
Sbjct: 576 SPLPSQA 582
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 QLAPLPAQ 9
Q AP+PA+
Sbjct: 28 QAAPMPAR 35
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 LAPLPAQA 10
LAPLP +
Sbjct: 868 LAPLPGKG 875
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 QLAPLPAQ 9
Q AP+PA+
Sbjct: 28 QAAPMPAR 35
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HQLAPLPA 8
HQ PLPA
Sbjct: 249 HQQRPLPA 256
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HQLAPLPA 8
HQ PLPA
Sbjct: 249 HQQRPLPA 256
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HQLAPLPA 8
HQ PLPA
Sbjct: 249 HQQRPLPA 256
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 QLAPLPAQ 9
Q AP+PA+
Sbjct: 28 QAAPMPAR 35
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HQLAPLPA 8
QLAP PA
Sbjct: 908 QQLAPNPA 915
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HQLAPLPA 8
QLAP PA
Sbjct: 908 QQLAPNPA 915
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HQLAPLPA 8
QLAP PA
Sbjct: 908 QQLAPNPA 915
193|Sequence|961|970|LPAQAVFASG
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 LPAQAVFA 8
LPA AVFA
Sbjct: 139 LPALAVFA 146
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 LPAQAVFA 8
LPA AVFA
Sbjct: 139 LPALAVFA 146
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAQAVFASG 10
P QA +A+G
Sbjct: 315 PGQAFYATG 323
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAQAVFASG 10
P QA +A+G
Sbjct: 309 PGQAFYATG 317
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAQAVFASG 10
P QA +A+G
Sbjct: 309 PGQAFYATG 317
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAQAVFASG 10
P Q FA+G
Sbjct: 311 PGQTFFATG 319
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAQAVFASG 10
P Q ++A+G
Sbjct: 307 PGQVLYATG 315
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 PAQAVFASG 10
P Q ++A+G
Sbjct: 305 PGQVLYATG 313
194|Sequence|966|975|VFASGTRQQL
>sp|YEC4_EBVB9|UNCHARACTERIZED protein EC-RF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VFASGTRQQ 9
VFA RQQ
Sbjct: 75 VFAGAQRQQ 83
195|Sequence|971|980|TRQQLDQDLL
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 TRQQLDQD 8
TRQ L QD
Sbjct: 42 TRQDLSQD 49
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 QQLDQDLL 10
Q+L QDLL
Sbjct: 1984 QELKQDLL 1991
196|Sequence|976|985|DQDLLGCLKY
>sp|VE8E2_HPV31|PROTEIN E8^E2C|Human papillomavirus 31
Query: 1 DQDLLGCLKY 10
D ++L CL+Y
Sbjct: 113 DANILKCLRY 122
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 1 DQDLLGCLKY 10
D ++L CL+Y
Sbjct: 301 DANILKCLRY 310
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 299 DKNSLKCLRY 308
>sp|VE8E2_HPV18|PROTEIN E8^E2C|Human papillomavirus type 18
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 101 DRNSLKCLRY 110
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 295 DRNSLKCLRY 304
>sp|VE8E2_HPV35|PROTEIN E8^E2C|Human papillomavirus 35
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 107 DANTLKCLRY 116
>sp|VE8E2_HPV16|PROTEIN E8^E2C|Human papillomavirus type 16
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 106 DANTLKCLRY 115
>sp|VE2_HPV35|REGULATORY protein E2|Human papillomavirus 35
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 296 DANTLKCLRY 305
>sp|VE2_HPV16|REGULATORY protein E2|Human papillomavirus type 16
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 294 DANTLKCLRY 303
>sp|VE2_HPV34|REGULATORY protein E2|Human papillomavirus type 34
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 274 DKNSLKCLRY 283
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 DQDLLGCLKY 10
D L+G LKY
Sbjct: 160 DTKLVGILKY 169
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LLGCLKY 10
+L CLKY
Sbjct: 208 ILNCLKY 214
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 4 LLGCLKY 10
+L CLKY
Sbjct: 208 ILNCLKY 214
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 104 DKNGLKCLRY 113
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 DQDLLGCLKY 10
D L+G LKY
Sbjct: 160 DTKLVGMLKY 169
>sp|VE2_HPV44|REGULATORY protein E2|Human papillomavirus 44
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 303 DANCLKCLRY 312
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 303 DPNCLKCLRY 312
>sp|VE4_HPV1|PROTEIN E4|Human papillomavirus type 1 (Human
Query: 2 QDLLGCLKY 10
Q LLG L+Y
Sbjct: 8 QGLLGLLQY 16
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 4 LLGCLKY 10
LL CL+Y
Sbjct: 204 LLNCLRY 210
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 299 DKNGLKCLRY 308
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 QDLLGCL 8
QD+L CL
Sbjct: 1857 QDMLQCL 1863
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 1 DQDLLGCLKY 10
D++ L CL+Y
Sbjct: 289 DKNGLKCLRY 298
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 QDLLGCL 8
QD+L CL
Sbjct: 1856 QDMLQCL 1862
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 1 DQDLLGCLKY 10
D L+G LKY
Sbjct: 160 DTRLVGILKY 169
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 DQDLLGCLKY 10
D L+G LKY
Sbjct: 160 DTRLVGILKY 169
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 DQDLLGCLKY 10
D L+G LKY
Sbjct: 160 DTRLVGILKY 169
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 300 DTNCLKCLRY 309
>sp|NSP5_ROTHC|NON-STRUCTURAL protein 5|Rotavirus C (isolate RVC/Human/United
Query: 1 DQDLLGCL 8
D+D+ GC+
Sbjct: 177 DEDIEGCI 184
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 QDLLGCL 8
QD+L CL
Sbjct: 1856 QDMLQCL 1862
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 LGCLKY 10
+GCL+Y
Sbjct: 248 IGCLRY 253
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1106 DQDLVG 1111
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1107 DQDLVG 1112
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1113 DQDLVG 1118
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1110 DQDLVG 1115
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1111 DQDLVG 1116
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1111 DQDLVG 1116
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1110 DQDLVG 1115
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 DQDLLG 6
DQDL+G
Sbjct: 1105 DQDLVG 1110
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 QDLLGCLKY 10
+ LL C KY
Sbjct: 129 EKLLSCCKY 137
>sp|VIF_HV2CA|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 2 QDLLGCLKY 10
+ LL C KY
Sbjct: 129 EKLLSCCKY 137
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 305 DTNSLKCLRY 314
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 5 LGCLKY 10
+GCL+Y
Sbjct: 248 IGCLRY 253
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 5 LGCLKY 10
+GCL+Y
Sbjct: 248 IGCLRY 253
>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 100 DPNSLKCLRY 109
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 296 DPNSLKCLRY 305
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 1 DQDLLGCLKY 10
D + L CL+Y
Sbjct: 287 DPNSLKCLRY 296
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 6 GCLKY 10
GC+KY
Sbjct: 19 GCIKY 23
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 2 QDLLGCL 8
+ LLGCL
Sbjct: 885 KSLLGCL 891
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 2 QDLLGCL 8
+ LLGCL
Sbjct: 885 KSLLGCL 891
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 DQDLLGCLKY 10
+ D L C KY
Sbjct: 1020 ETDYLECFKY 1029
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 QDLLGC 7
Q+L+GC
Sbjct: 321 QELIGC 326
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 DQDLLGCLKY 10
D L+G L+Y
Sbjct: 160 DTKLVGILRY 169
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 DQDLLGCLK 9
DQ+L C+K
Sbjct: 112 DQNLKPCVK 120
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 LLGCL 8
LLGCL
Sbjct: 3534 LLGCL 3538
>sp|VD4L_CWPXG|ANKYRIN repeat protein D4L/I2R|Cowpox virus (strain GRI-90 /
Query: 2 QDLLGCLKY 10
+ LL C++Y
Sbjct: 541 EPLLACIRY 549
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 LLGCL 8
LLGCL
Sbjct: 3534 LLGCL 3538
197|Sequence|981|990|GCLKYFINFF
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 GCLKYFINF 9
GC Y+++F
Sbjct: 163 GCTTYYVDF 171
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 GCLKYFINF 9
GC Y+++F
Sbjct: 163 GCTTYYVDF 171
>sp|VE2_HPV31|REGULATORY protein E2|Human papillomavirus 31
Query: 1 GCLKYFINF 9
G + YF+NF
Sbjct: 163 GHITYFVNF 171
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 GCLKYFI 7
GC YFI
Sbjct: 195 GCFLYFI 201
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 GCLKYFIN 8
CL+Y+ N
Sbjct: 1668 ACLRYYSN 1675
>sp|PG068_VACCC|PROTEIN OPG068|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KYFINFF 10
KYFI+F+
Sbjct: 317 KYFISFY 323
>sp|PG068_MONPV|PROTEIN OPG068|Monkeypox virus (MPXV)
Query: 4 KYFINFF 10
KYFI+F+
Sbjct: 317 KYFISFY 323
>sp|PG068_VARV|PROTEIN OPG068|Variola virus
Query: 4 KYFINFF 10
KYFI+F+
Sbjct: 317 KYFISFY 323
>sp|PG068_VAR67|PROTEIN OPG068|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 KYFINFF 10
KYFI+F+
Sbjct: 317 KYFISFY 323
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 GCLKYFI 7
GC+ Y+I
Sbjct: 971 GCMDYWI 977
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 GCLKYFI 7
GC+ Y+I
Sbjct: 971 GCMDYWI 977
>sp|PG015_MONPV|ANKYRIN repeat domain-containing protein OPG015|Monkeypox virus (MPXV)
Query: 2 CLKYFI 7
C+KYF+
Sbjct: 309 CIKYFM 314
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 2 CLKYFI 7
C+KYFI
Sbjct: 507 CIKYFI 512
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLKYFI 7
C+KYFI
Sbjct: 511 CIKYFI 516
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 GCLKYF 6
CLKYF
Sbjct: 210 NCLKYF 215
>sp|GL_HHV6Z|ENVELOPE glycoprotein L|Human herpesvirus 6B (strain Z29)
Query: 1 GCLKYF 6
CLKYF
Sbjct: 210 NCLKYF 215
>sp|PRO_ADE04|PROTEASE adenovirus E serotype 4
Query: 1 GCLKYFINFF 10
GC YF+ F
Sbjct: 18 GCGPYFLGTF 27
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 LKYFINF 9
++YFI+F
Sbjct: 85 IEYFIDF 91
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 2 CLKYFI 7
C+K+F+
Sbjct: 276 CMKFFV 281
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 GCLKYFIN 8
GC ++FI+
Sbjct: 12 GCSEWFID 19
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 5 YFINF 9
YF+NF
Sbjct: 599 YFLNF 603
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 5 YFINF 9
YF+NF
Sbjct: 591 YFLNF 595
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 YFINF 9
YF+NF
Sbjct: 591 YFLNF 595
>sp|PRO_ADE41|PROTEASE adenovirus F serotype 41
Query: 1 GCLKYFINFF 10
GC YF+ F
Sbjct: 16 GCGSYFLGTF 25
>sp|E1B55_ADE12|E1B 55 kDa protein|Human adenovirus A serotype 12
Query: 5 YFINF 9
YF+NF
Sbjct: 248 YFLNF 252
>sp|GL_HHV7J|ENVELOPE glycoprotein L|Human herpesvirus 7 (strain JI)
Query: 1 GCLKYFINFF 10
CL+YF ++
Sbjct: 206 NCLRYFSRYY 215
>sp|PRO_ADE03|PROTEASE adenovirus B serotype 3
Query: 1 GCLKYFINFF 10
GC YF+ F
Sbjct: 22 GCGPYFLGTF 31
>sp|PRO_ADE40|PROTEASE adenovirus F serotype 40
Query: 1 GCLKYFINFF 10
GC YF+ F
Sbjct: 16 GCGPYFLGTF 25
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CLKYFI 7
C+K+F+
Sbjct: 276 CMKFFV 281
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 2 CLKYFI 7
C+K+F+
Sbjct: 276 CMKFFV 281
198|Sequence|986|995|FINFFFYKFG
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 2 INFFFYKF 9
I+ FF+KF
Sbjct: 199 IDMFFHKF 206
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I96A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I96A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I88A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I83A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I81A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I80AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I77AD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I77AB|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I77AA|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I73A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I67A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I61A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Puerto
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Brevig
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I02A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Guinea
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Silky
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I00A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/New
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 5 FFYKFG 10
FFY++G
Sbjct: 495 FFYRYG 500
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FINFFFYKFG 10
FI+FF FG
Sbjct: 725 FISFFKNPFG 734
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FINFFFYKFG 10
FI+FF FG
Sbjct: 725 FISFFKNPFG 734
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FINFFFYKFG 10
FI+FF FG
Sbjct: 725 FISFFKNPFG 734
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 INFFFY 7
+ FFFY
Sbjct: 1396 VRFFFY 1401
>sp|UL20_HHV2H|PROTEIN UL20|Human herpesvirus 2 (strain HG52)
Query: 1 FINFFFYKF 9
F NFF +F
Sbjct: 202 FTNFFLARF 210
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 INFFFY 7
+ FFFY
Sbjct: 1396 VRFFFY 1401
>sp|CVC1_HHV6U|CAPSID vertex component 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 INFFFYKFG 10
I+FF ++FG
Sbjct: 432 IDFFNWRFG 440
>sp|CVC1_HHV6Z|CAPSID vertex component 1|Human herpesvirus 6B (strain Z29)
Query: 2 INFFFYKFG 10
I+FF ++FG
Sbjct: 432 IDFFNWRFG 440
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 3 NFFFYKFG 10
NF+FY F
Sbjct: 272 NFYFYSFS 279
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 NFFFYKFG 10
NF+FY F
Sbjct: 272 NFYFYSFS 279
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 NFFFYKFG 10
NF+FY F
Sbjct: 272 NFYFYSFS 279
199|Sequence|991|1000|FYKFGLEICF
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 FYKFGLEICF 10
FY FG +CF
Sbjct: 864 FYTFGSYVCF 873
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 FYKFGLEICF 10
FY FG +CF
Sbjct: 864 FYTFGSYVCF 873
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 FYKFGLEICF 10
FY FG CF
Sbjct: 865 FYTFGSYACF 874
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 FYKFGLEICF 10
Y FG +CF
Sbjct: 1463 LYSFGAVLCF 1472
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 FYKFGLEICF 10
Y FG +CF
Sbjct: 1463 LYSFGAVLCF 1472
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 1 FYKFGLEICF 10
FY++G E F
Sbjct: 496 FYRYGFEANF 505
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 407 WYSFGFEI 414
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 407 WYSFGFEI 414
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 407 WYSFGFEI 414
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 407 WYSFGFEI 414
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 408 WYSFGFEI 415
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 FYKFGLEI 8
+Y FG EI
Sbjct: 407 WYSFGFEI 414
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 FYKFGLEIC 9
++K GL IC
Sbjct: 30 YFKCGLGIC 38
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 GLEICF 10
GLE+C+
Sbjct: 795 GLEVCY 800
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 GLEICF 10
GLE+C+
Sbjct: 795 GLEVCY 800
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 GLEICF 10
GLE+C+
Sbjct: 795 GLEVCY 800
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 3 KFGLEICF 10
K GL +C
Sbjct: 766 KIGLRVCL 773
>sp|U18_HHV6Z|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 YKFGLEICF 10
Y F + +CF
Sbjct: 12 YTFVMGVCF 20
>sp|U18_HHV6H|PUTATIVE immediate early glycoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 YKFGLEICF 10
Y F + +CF
Sbjct: 12 YTFVMGVCF 20
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 KFGLEIC 9
K GL +C
Sbjct: 759 KIGLRVC 765
200|Sequence|996|1005|LEICFLMAVN
>sp|NRAM_I96A1|NEURAMINIDASE A virus (strain A/Niigata/137/1996
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I93A0|NEURAMINIDASE A virus (strain A/Kitakyushu/159/1993
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I83A8|NEURAMINIDASE A virus (strain A/Hong
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I80A4|NEURAMINIDASE A virus (strain A/Memphis/4/1980
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I79A0|NEURAMINIDASE A virus (strain A/Bangkok/1/1979
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I78A8|NEURAMINIDASE A virus (strain A/Memphis/18/1978
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I78A7|NEURAMINIDASE A virus (strain A/Memphis/2/1978
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I77AH|NEURAMINIDASE A virus (strain A/Texas/1/1977
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 3 ICFLMAV 9
ICFLM +
Sbjct: 20 ICFLMQI 26
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 LEICFLMA 8
LEICF+ +
Sbjct: 42 LEICFMYS 49
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 LEICFLMA 8
LEICF+ +
Sbjct: 42 LEICFMYS 49
>sp|PAX_I78A9|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 1 LEICFLMA 8
LEICF+ +
Sbjct: 42 LEICFMYS 49
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 1 LEICFLMA 8
LEICF+ +
Sbjct: 42 LEICFMYS 49
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 3 ICFLMAV 9
+CFLM +
Sbjct: 20 VCFLMQI 26
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 35 LEVCFMYS 42
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 38 LEVCFMYS 45
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 35 LEVCFMYS 42
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 19 LEVCFMYS 26
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I97A1|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I97A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I96A3|PROTEIN PA-X|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I96A2|PROTEIN PA-X|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I85A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I83A1|PROTEIN PA-X|Influenza A virus (strain A/Chile/1/1983
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I82A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I80AA|PROTEIN PA-X|Influenza A virus (strain A/India/6263/1980
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I80A2|PROTEIN PA-X|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I78A3|PROTEIN PA-X|Influenza A virus (strain A/Mallard/New
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I77AB|PROTEIN PA-X|Influenza A virus (strain A/USSR/90/1977
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I77AA|PROTEIN PA-X|Influenza A virus (strain A/Brazil/11/1978
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I73A4|PROTEIN PA-X|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I68A6|PROTEIN PA-X|Influenza A virus (strain A/Northern
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I68A5|PROTEIN PA-X|Influenza A virus (strain A/Korea/426/1968
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I68A4|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I67A0|PROTEIN PA-X|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I60A0|PROTEIN PA-X|Influenza A virus (strain A/Ann
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I59A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I57A5|PROTEIN PA-X|Influenza A virus (strain A/Singapore/1/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I57A3|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I57A2|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I57A1|PROTEIN PA-X|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I57A0|PROTEIN PA-X|Influenza A virus (strain A/Japan/305/1957
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I54A2|PROTEIN PA-X|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I51A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I47A0|PROTEIN PA-X|Influenza A virus (strain A/Fort
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I45A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I43A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I40A0|PROTEIN PA-X|Influenza A virus (strain A/Hickox/1940
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I36A0|PROTEIN PA-X|Influenza A virus (strain A/Henry/1936
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I35A3|PROTEIN PA-X|Influenza A virus (strain A/USA:Phila/1935
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I07A0|PROTEIN PA-X|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I05A1|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I04A1|PROTEIN PA-X|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I02A6|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I02A5|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I02A4|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I02A2|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I02A1|PROTEIN PA-X|Influenza A virus (strain A/Guinea
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I01A3|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I00A1|PROTEIN PA-X|Influenza A virus (strain A/New
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I00A0|PROTEIN PA-X|Influenza A virus (strain A/Duck/Hong
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 1 LEICFLMA 8
LE+CF+ +
Sbjct: 42 LEVCFMYS 49
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 LEICFLMAV 9
LE+CF ++V
Sbjct: 296 LELCFKLSV 304
>sp|NEC2_HHV6Z|NUCLEAR egress protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 LEICFLMAV 9
+ ICFL+A+
Sbjct: 249 VSICFLLAL 257
>sp|NEC2_HHV6U|NUCLEAR egress protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 ICFLMAV 9
ICFL+A+
Sbjct: 251 ICFLLAL 257
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 3 ICFLM 7
+CFLM
Sbjct: 20 VCFLM 24
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 1 LEICFLMA 8
LE+C++++
Sbjct: 42 LEVCYVIS 49
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 1 LEICFLMA 8
LE+C++++
Sbjct: 42 LEVCYVIS 49
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 1 LEICFLMA 8
LE+C++++
Sbjct: 42 LEVCYVIS 49
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 LEICFLMA 8
LE+C++++
Sbjct: 42 LEVCYVIS 49
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 1 LEICFLMA 8
LE+C++++
Sbjct: 42 LEVCYVIS 49
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 ICFLMAVN 10
+C LMA N
Sbjct: 5157 VCSLMACN 5164
201|Sequence|1001|1010|LMAVNVIGQR
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 2 MAVNVIGQR 10
+ VNV GQR
Sbjct: 146 ICVNVFGQR 154
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 MAVNVIGQR 10
+ VNV GQR
Sbjct: 146 ICVNVFGQR 154
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 AVNVIGQ 9
A+NVIGQ
Sbjct: 957 AMNVIGQ 963
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 AVNVIGQ 9
A+NVIGQ
Sbjct: 957 AMNVIGQ 963
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 5 NVIGQR 10
N+IGQR
Sbjct: 501 NLIGQR 506
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 NVIGQR 10
N+IGQR
Sbjct: 502 NLIGQR 507
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 NVIGQR 10
N+IGQR
Sbjct: 502 NLIGQR 507
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 MAVNVIGQR 10
+ VNV GQ+
Sbjct: 140 VCVNVFGQQ 148
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 MAVNVIGQR 10
+ VNV GQ+
Sbjct: 140 VCVNVFGQQ 148
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 MAVNVIGQR 10
+ VNV GQ+
Sbjct: 140 VCVNVFGQQ 148
202|Sequence|1006|1015|VIGQRMNFLV
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2617 GQRVEFLV 2624
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2617 GQRVEFLV 2624
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2617 GQRVEFLV 2624
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2617 GQRVEFLV 2624
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2618 GQRVEFLV 2625
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2617 GQRVEFLV 2624
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2617 GQRVEFLV 2624
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2618 GQRVEFLV 2625
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 GQRMNFLV 10
GQR+ FLV
Sbjct: 2618 GQRVEFLV 2625
>sp|ST_POVJC|SMALL t antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 QRMNFL 9
+RMNFL
Sbjct: 53 KRMNFL 58
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 4 QRMNFL 9
+RMNFL
Sbjct: 53 KRMNFL 58
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 VIGQRMNF 8
V+G RMN+
Sbjct: 3 VMGIRMNY 10
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 VIGQRMN 7
V+G++MN
Sbjct: 1171 VVGEKMN 1177
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 VIGQRMNF 8
V G+RM F
Sbjct: 159 VCGERMRF 166
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 VIGQRMNF 8
V G+RM F
Sbjct: 159 VCGERMRF 166
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 VIGQRMNF 8
V G+RM F
Sbjct: 159 VCGERMRF 166
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 VIGQRMNFLV 10
VIG + FL+
Sbjct: 62 VIGSALQFLI 71
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 VIGQRMNFLV 10
VIG + FL+
Sbjct: 63 VIGSALQFLI 72
>sp|TAX_HTL1C|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 VIGQRMNFLV 10
VIG + FL+
Sbjct: 63 VIGSALQFLI 72
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 VIGQRMNFLV 10
VIG + FL+
Sbjct: 63 VIGSALQFLI 72
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 IGQRMNFLV 10
+GQR+N L+
Sbjct: 676 LGQRVNNLL 684
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 VIGQRMNFL 9
++G+ NFL
Sbjct: 509 ILGRNANFL 517
203|Sequence|1011|1020|MNFLVTLHGC
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 2 NFLVTLHG 9
N L+TLHG
Sbjct: 198 NLLITLHG 205
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 2 NFLVTLHGC 10
+FL TLH C
Sbjct: 355 SFLATLHTC 363
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 MNFLVTLHG 9
M+FL LHG
Sbjct: 65 MSFLRLLHG 73
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 MNFLVTLHG 9
M+FL LHG
Sbjct: 65 MSFLRLLHG 73
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 NFLVTLH 8
NFL+T H
Sbjct: 155 NFLITAH 161
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 MNFLVTLHGC 10
+NFL L GC
Sbjct: 213 LNFLGGLPGC 222
>sp|GB_VZVO|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Oka vaccine)
Query: 2 NFLVTLH 8
NFLVT H
Sbjct: 348 NFLVTPH 354
>sp|GB_VZVD|ENVELOPE glycoprotein B|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 NFLVTLH 8
NFLVT H
Sbjct: 348 NFLVTPH 354
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 MNFLVTLHGC 10
+NFL L GC
Sbjct: 213 LNFLGGLPGC 222
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 MNFLVTLHGC 10
+NF+V GC
Sbjct: 5682 VNFVVQTEGC 5691
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 MNFLVTLHG 9
M F+ LHG
Sbjct: 77 MTFIEMLHG 85
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 MNFLVTLHG 9
M F+ LHG
Sbjct: 77 MTFIEMLHG 85
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 3 FLVTLHGC 10
F+V+ +GC
Sbjct: 181 FIVSSYGC 188
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 NFLVTLHG 9
N+L+ LH
Sbjct: 397 NYLIPLHA 404
>sp|CVC1_HCMVM|CAPSID vertex component 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VTLHG 9
VTLHG
Sbjct: 545 VTLHG 549
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 VTLHG 9
VTLHG
Sbjct: 545 VTLHG 549
204|Sequence|1016|1025|TLHGCWLVAI
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 TLHGCWL 7
TLHG W+
Sbjct: 202 TLHGSWM 208
>sp|VE1_HPV69|REPLICATION protein E1|Human papillomavirus 69
Query: 3 HGCWL 7
+GCWL
Sbjct: 512 YGCWL 516
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 LHGCW 6
L+GCW
Sbjct: 275 LYGCW 279
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 2 LHGCW 6
L+GCW
Sbjct: 275 LYGCW 279
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 4 GCWLV 8
GCW++
Sbjct: 575 GCWII 579
>sp|HEMA_INCTA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 4 GCWLV 8
GCW++
Sbjct: 575 GCWII 579
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 4 GCWLV 8
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCMI|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Mississippi/1980)
Query: 4 GCWLV 8
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 4 GCWLV 8
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 4 GCWLV 8
GCW++
Sbjct: 582 GCWII 586
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 4 GCWLV 8
GCW++
Sbjct: 568 GCWII 572
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCEN|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/England/892/1983)
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWII 573
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 4 GCWLV 8
GCW++
Sbjct: 581 GCWII 585
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 TLHGCWLVA 9
T HGC ++A
Sbjct: 897 TAHGCDIIA 905
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 TLHGCWLVA 9
T HGC ++A
Sbjct: 897 TAHGCDIIA 905
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 TLHGCWLVA 9
T HGC ++A
Sbjct: 894 TAHGCDIIA 902
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 4 GCWLV 8
GCW++
Sbjct: 569 GCWVI 573
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 4 GCWLV 8
GCW++
Sbjct: 582 GCWVI 586
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 GCWL 7
GCWL
Sbjct: 4053 GCWL 4056
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 4 GCWLVAI 10
G W+VA+
Sbjct: 445 GAWMVAV 451
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 TLHGCWLVA 9
T HGC ++A
Sbjct: 907 TAHGCDVIA 915
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 TLHGCWLVA 9
T HGC ++A
Sbjct: 896 TAHGCDVIA 904
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 TLHGCWLVA 9
T HGC ++A
Sbjct: 913 TAHGCDVIA 921
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GCWL 7
GCWL
Sbjct: 4028 GCWL 4031
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 3 HGCWL 7
H CW+
Sbjct: 471 HNCWI 475
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 GCWL 7
GCWL
Sbjct: 4053 GCWL 4056
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3289 TLNGLWL 3295
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3289 TLNGLWL 3295
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3266 TLNGLWL 3272
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 HGCWLVA 9
H CWL A
Sbjct: 1973 HVCWLEA 1979
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3273 TLNGLWL 3279
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 4 GCWL 7
GCWL
Sbjct: 4028 GCWL 4031
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3266 TLNGLWL 3272
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3273 TLNGLWL 3279
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3272 TLNGLWL 3278
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3360 TLNGLWL 3366
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3330 TLNGLWL 3336
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3310 TLNGLWL 3316
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3272 TLNGLWL 3278
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3360 TLNGLWL 3366
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3330 TLNGLWL 3336
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 TLHGCWL 7
TL+G WL
Sbjct: 3310 TLNGLWL 3316
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 TLHGCWL 7
T+HGC L
Sbjct: 2316 TVHGCAL 2322
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 TLHGCWL 7
T+HGC L
Sbjct: 2316 TVHGCAL 2322
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 LHGCW 6
LHG W
Sbjct: 2124 LHGLW 2128
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 TLHGC 5
T+HGC
Sbjct: 160 TVHGC 164
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 TLHGCWL 7
T+HGC L
Sbjct: 2315 TVHGCAL 2321
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 1 TLHGC 5
T+HGC
Sbjct: 160 TVHGC 164
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 906 TAHGCDTIA 914
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 905 TAHGCDTIA 913
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 905 TAHGCDTIA 913
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 915 TAHGCDTIA 923
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 903 TAHGCDTIA 911
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 896 TAHGCDTIA 904
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 897 TAHGCDTIA 905
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 895 TAHGCDTIA 903
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 895 TAHGCDTIA 903
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 TLHGCWLVA 9
T HGC +A
Sbjct: 899 TAHGCDTIA 907
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 TLHGCWL 7
T+HGC L
Sbjct: 2307 TVHGCAL 2313
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 TLHGCWLVAI 10
T+ C+++AI
Sbjct: 218 TIQECFVIAI 227
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 2 LHGCWLVAI 10
LH WL +
Sbjct: 257 LHKLWLTVV 265
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LHGCWLVAI 10
LH WL +
Sbjct: 257 LHKLWLTVV 265
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 HGCWLVAI 10
HG W V I
Sbjct: 289 HGNWTVEI 296
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 HGCWLVAI 10
HG W V I
Sbjct: 289 HGNWTVEI 296
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 2 LHGCWL 7
+HG W+
Sbjct: 237 IHGSWV 242
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 2 LHGCWL 7
LHG W
Sbjct: 262 LHGYWF 267
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 2 LHGC 5
LHGC
Sbjct: 255 LHGC 258
205|Sequence|1021|1030|WLVAILTRRH
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 WLVAILTRR 9
WL A+L RR
Sbjct: 2902 WLWAVLCRR 2910
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 WLVAILTRRH 10
W++A +++H
Sbjct: 3139 WVLAYFSKKH 3148
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 WLVAILTRRH 10
W++A +++H
Sbjct: 3139 WVLAYFSKKH 3148
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 1 WLVAILT 7
W+++ILT
Sbjct: 5 WIISILT 11
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 WLVAILT 7
W+++ILT
Sbjct: 5 WIISILT 11
>sp|PG172_MONPV|PROTEIN OPG172|Monkeypox virus (MPXV)
Query: 1 WLVAILT 7
W+++ILT
Sbjct: 5 WIISILT 11
>sp|PG172_VACCC|PROTEIN A43|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WLVAILT 7
W+++ILT
Sbjct: 6 WIISILT 12
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 VAILTRR 9
+AILTRR
Sbjct: 155 LAILTRR 161
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 VAILTRR 9
+AILTRR
Sbjct: 155 LAILTRR 161
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 VAILTRR 9
+AILTRR
Sbjct: 156 LAILTRR 162
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 WLVAIL 6
WL+AIL
Sbjct: 895 WLLAIL 900
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 WLVAIL 6
WL+AIL
Sbjct: 895 WLLAIL 900
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WLVAIL 6
WL+AIL
Sbjct: 895 WLLAIL 900
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 WLVAIL 6
WL+AIL
Sbjct: 895 WLLAIL 900
206|Sequence|1026|1035|LTRRHRQAIA
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 TRRHRQAI 9
T +HRQA+
Sbjct: 98 TNQHRQAL 105
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 2 TRRHRQAI 9
TRR RQA+
Sbjct: 43 TRRRRQAV 50
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 1 LTRRHRQAIA 10
+ R HR AIA
Sbjct: 279 IIRLHRPAIA 288
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LTRRHRQAI 9
+TRRH+ I
Sbjct: 60 VTRRHQAVI 68
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 1 LTRRHRQAIA 10
+ R HR AIA
Sbjct: 279 IIRLHRPAIA 288
207|Sequence|1031|1040|RQAIARLWPN
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 2 QAIARLWPN 10
+A+AR WP+
Sbjct: 1366 RAVARKWPD 1374
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 2 QAIARLWPN 10
+A+AR WP+
Sbjct: 35 RAVARKWPD 43
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 2 QAIARLWP 9
+A+AR WP
Sbjct: 1369 RAVARKWP 1376
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 RQAIARLWP 9
R +AR WP
Sbjct: 147 RYELARYWP 155
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 QAIARLWPN 10
+A+A+ WP+
Sbjct: 1371 RAVAKKWPS 1379
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 QAIARLWPN 10
+A+A+ WP+
Sbjct: 1367 RAVAKKWPS 1375
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 QAIARLWPN 10
+A+A+ WP+
Sbjct: 1367 RAVAKKWPS 1375
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 AIARLWPN 10
A+A L+PN
Sbjct: 303 AVAALFPN 310
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 AIARLWPN 10
A+A L+PN
Sbjct: 303 AVAALFPN 310
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 AIARLWPN 10
A+A L+PN
Sbjct: 303 AVAALFPN 310
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 AIARLWPN 10
A+A L+PN
Sbjct: 303 AVAALFPN 310
208|Sequence|1036|1045|RLWPNYCLFL
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 WPNYC 7
WP+YC
Sbjct: 107 WPSYC 111
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 WPNYC 7
WP+YC
Sbjct: 107 WPSYC 111
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 WPNYC 7
WP+YC
Sbjct: 107 WPSYC 111
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 LWPNYCLF 9
L+PN C+F
Sbjct: 553 LYPNVCIF 560
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 LWPNYCLF 9
L+PN C+F
Sbjct: 552 LYPNVCIF 559
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LWPNYCLF 9
L+PN C+F
Sbjct: 552 LYPNVCIF 559
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 WPNYC 7
WP YC
Sbjct: 107 WPEYC 111
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 WPNYC 7
WP YC
Sbjct: 107 WPEYC 111
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LWPNYCLF 9
L+PN C+F
Sbjct: 553 LYPNVCIF 560
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LWPNYCLF 9
L+PN C+F
Sbjct: 553 LYPNVCIF 560
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 2 LWPNYCLF 9
L+PN C++
Sbjct: 555 LYPNVCIY 562
>sp|CAPSD_HCYV5|CAPSID protein|Human associated cyclovirus 1 (isolate
Query: 2 LWPNYCLF 9
L P YC+F
Sbjct: 99 LIPAYCMF 106
>sp|VE6_HPV05|PROTEIN E6|Human papillomavirus 5
Query: 2 LWPNYCLF 9
+W +YC+F
Sbjct: 64 IWKDYCVF 71
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 LWPNYC 7
+WP YC
Sbjct: 1167 IWPIYC 1172
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 NYCLFL 10
N+CLFL
Sbjct: 525 NFCLFL 530
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 WPNYCLFL 10
WP +CL +
Sbjct: 7 WPFFCLLI 14
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 RLWPNYCLF 9
R W N+C +
Sbjct: 233 RTWENHCTY 241
>sp|UL29_HCMVA|UNCHARACTERIZED protein UL29|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WPNYCLFL 10
WP+ C+++
Sbjct: 78 WPSQCIYV 85
>sp|VE6_HPV5B|PROTEIN E6|Human papillomavirus type 5b
Query: 2 LWPNYCLF 9
+W +YC+F
Sbjct: 64 IWKDYCVF 71
>sp|VE6_HPV36|PROTEIN E6|Human papillomavirus 36
Query: 2 LWPNYCLF 9
+W +YC+F
Sbjct: 64 IWKDYCVF 71
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 WPNYC 7
WPN C
Sbjct: 297 WPNNC 301
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WPNYC 7
WPN C
Sbjct: 297 WPNNC 301
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 3 WPNYC 7
WPN C
Sbjct: 297 WPNNC 301
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 328 PNYCFPL 334
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 300 PNYCFPL 306
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 293 PNYCFPL 299
>sp|CAPSH_ADE01|HEXON protein|Human adenovirus C serotype 1
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 304 PNYCFPL 310
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 WPNYCLFL 10
WP+ C+++
Sbjct: 78 WPSQCIYV 85
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 3 WPNYC 7
WPN C
Sbjct: 297 WPNNC 301
>sp|PG160_VACCC|DNA packaging protein OPG160|Vaccinia virus (strain Copenhagen)
Query: 2 LWPNYCLFL 10
+WPN+ F+
Sbjct: 64 IWPNHINFV 72
>sp|GAG_HV1LW|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 436 KIWPSY 441
>sp|GAG_HV1JR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 436 KIWPSY 441
>sp|GAG_HV1H2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 436 KIWPSY 441
>sp|GAG_HV1BR|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 436 KIWPSY 441
>sp|GAG_HV1B5|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 436 KIWPSY 441
>sp|GAG_HV1B1|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 436 KIWPSY 441
>sp|GAG_HV1A2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RLWPNY 6
++WP+Y
Sbjct: 438 KIWPSY 443
>sp|PG160_VARV|DNA packaging protein OPG160|Variola virus
Query: 2 LWPNYCLFL 10
+WPN+ F+
Sbjct: 64 IWPNHINFV 72
>sp|PG160_VAR67|DNA packaging protein OPG160|Variola virus (isolate
Query: 2 LWPNYCLFL 10
+WPN+ F+
Sbjct: 64 IWPNHINFV 72
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 283 PNYCFPL 289
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 399 PNYCFPL 405
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RLWPNYCLFL 10
R W N+C F
Sbjct: 377 RGWGNHCGFF 386
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 WPNYC 7
WPN C
Sbjct: 297 WPNNC 301
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 WPNYCLFL 10
WP+ C+++
Sbjct: 77 WPSQCIYV 84
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 2 LWPNYCLF 9
LW ++C+F
Sbjct: 78 LWKDHCVF 85
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 394 PNYCFPL 400
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 400 PNYCFPL 406
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 404 PNYCFPL 410
>sp|PG160_MONPV|DNA packaging protein OPG160|Monkeypox virus (MPXV)
Query: 2 LWPNYCLFL 10
+WPN+ F+
Sbjct: 94 IWPNHINFV 102
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 379 PNYCFPL 385
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 423 PNYCFPL 429
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 RLWPNYCLF 9
R W N+C +
Sbjct: 233 RTWENHCRY 241
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 411 PNYCFPL 417
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 4 PNYCLFL 10
PNYC +
Sbjct: 168 PNYCYII 174
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1778 PNYNLFI 1784
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1775 PNYNLFI 1781
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 387 PNYCFPL 393
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 4 PNYCLFL 10
PNYC L
Sbjct: 384 PNYCFPL 390
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 4 PNYC 7
PNYC
Sbjct: 168 PNYC 171
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1781 PNYNLFV 1787
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 1 RLWPNY 6
R WPN+
Sbjct: 138 RSWPNH 143
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1780 PNYNLFV 1786
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1781 PNYNLFV 1787
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1781 PNYNLFV 1787
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1781 PNYNLFV 1787
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1780 PNYNLFV 1786
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1782 PNYNLFV 1788
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 4 PNYCLFL 10
PNY LF+
Sbjct: 1782 PNYNLFV 1788
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 2 LWPNYCL 8
LWP Y L
Sbjct: 438 LWPVYFL 444
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 2 LWPNYCL 8
LWP Y L
Sbjct: 438 LWPVYFL 444
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 4 PNYCL 8
P YCL
Sbjct: 197 PEYCL 201
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 99 RGWGNHC 105
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 99 RGWGNHC 105
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 99 RGWGNHC 105
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 99 RGWGNHC 105
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 5 NYCLFL 10
N CLFL
Sbjct: 1470 NNCLFL 1475
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 5 NYCLFL 10
N CLFL
Sbjct: 1469 NNCLFL 1474
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 5 NYCLFL 10
N CLFL
Sbjct: 1469 NNCLFL 1474
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 5 NYCLFL 10
N CLFL
Sbjct: 1469 NNCLFL 1474
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 380 RGWGNHC 386
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 380 RGWGNHC 386
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 2 LWPNYCLFL 10
L YCL+L
Sbjct: 254 LLQQYCLYL 262
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RLWPNYC 7
R W N+C
Sbjct: 379 RGWGNHC 385
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 5 NYCLFL 10
N CLFL
Sbjct: 1467 NNCLFL 1472
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 5 NYCLFL 10
++CLFL
Sbjct: 509 DFCLFL 514
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LWPNYCLF 9
LW ++C++
Sbjct: 244 LWIDFCVY 251
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 LWPNYCLFL 10
L P+Y LFL
Sbjct: 831 LSPHYKLFL 839
209|Sequence|1041|1050|YCLFLALFLL
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 CLFLALFL 9
C++LALFL
Sbjct: 88 CVYLALFL 95
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 3 LFLALFLL 10
LFLA+FL+
Sbjct: 7 LFLAVFLM 14
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LFLALFLL 10
LFLA+FL+
Sbjct: 7 LFLAVFLM 14
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 3 LFLALFLL 10
LFLA+FL+
Sbjct: 7 LFLAVFLM 14
>sp|NCAP_DHVI1|NUCLEOPROTEIN virus (strain Indian/1313/61) (Dho)
Query: 1 YCLFLALFL 9
+C FL+L L
Sbjct: 466 FCCFLSLLL 474
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YCLFLALFLL 10
YC +LA L
Sbjct: 194 YCCYLAFLAL 203
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 YCLFLALFLL 10
YC +LA L
Sbjct: 194 YCCYLAFLAL 203
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YCLFLALFLL 10
YC +LA L
Sbjct: 194 YCCYLAFLAL 203
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 3 LFLALFLL 10
LFLALF +
Sbjct: 9 LFLALFAI 16
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 YCLFLA 6
YC FLA
Sbjct: 1296 YCKFLA 1301
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 2 CLFLALF 8
CL +A+F
Sbjct: 549 CLLMAIF 555
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 LFLALFLL 10
LFLA F+L
Sbjct: 1601 LFLAPFIL 1608
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 1 YCLFLALFL 9
Y FLALF+
Sbjct: 250 YPQFLALFV 258
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 1 YCLFLALFL 9
Y FLALF+
Sbjct: 250 YPQFLALFV 258
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 1 YCLFLALFL 9
Y FLALF+
Sbjct: 250 YPQFLALFV 258
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 YCLFLALFL 9
Y FLALF+
Sbjct: 248 YPQFLALFV 256
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 YCLFLALFL 9
Y FLALF+
Sbjct: 248 YPQFLALFV 256
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 LFLALFLL 10
LFL +FLL
Sbjct: 3329 LFLQVFLL 3336
Query: 2 CLFLALF 8
CLF+AL
Sbjct: 3381 CLFVALL 3387
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 LFLALFLL 10
LFL +FLL
Sbjct: 3329 LFLQVFLL 3336
Query: 2 CLFLALF 8
CLF+AL
Sbjct: 3381 CLFVALL 3387
>sp|TRM2_HHV8P|TRIPARTITE terminase subunit 2|Human herpesvirus 8 type P
Query: 1 YCLFLALFLL 10
YC +L FL+
Sbjct: 29 YCQYLKTFLV 38
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 YCLFLALFLL 10
+ +FL +FLL
Sbjct: 3 HSVFLLMFLL 12
210|Sequence|1046|1055|ALFLLYQYLL
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 ALFLLYQYLL 10
+LF+L +YL+
Sbjct: 842 SLFMLVKYLM 851
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 LFLLYQYLL 10
L+L+Y Y+L
Sbjct: 66 LWLMYHYVL 74
>sp|P100_HHV6U|LARGE structural phosphoprotein|Human herpesvirus 6A (strain
Query: 2 LFLLYQYLL 10
L+L+Y Y+L
Sbjct: 66 LWLMYHYVL 74
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 LFLLYQYLL 10
L+L+Y Y+L
Sbjct: 66 LWLMYHYVL 74
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 2 LFLLYQYLL 10
LF+L+ Y+L
Sbjct: 13 LFILFIYIL 21
>sp|VP7_ROTHC|OUTER capsid glycoprotein VP7|Rotavirus C (isolate RVC/Human/United
Query: 2 LFLLYQYLL 10
LF+L+ Y+L
Sbjct: 13 LFILFIYIL 21
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 ALFLLYQYLL 10
A+F+L ++LL
Sbjct: 1144 AVFVLMEFLL 1153
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 LFLLYQYL 9
L LLY+Y+
Sbjct: 1104 LLLLYEYI 1111
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 ALFLLYQYLL 10
ALF++ +Y++
Sbjct: 1144 ALFVVLEYII 1153
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 ALFLLYQYLL 10
ALF++ +Y++
Sbjct: 1144 ALFVVLEYII 1153
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 2 LFLLYQYLL 10
LF++ YLL
Sbjct: 4 LFIILMYLL 12
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 3 FLLYQYLL 10
F++Y++LL
Sbjct: 32 FIIYRFLL 39
211|Sequence|1051|1060|YQYLLCLGMP
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 YQYLLCLG 8
Y YL+C G
Sbjct: 62 YMYLICYG 69
>sp|RIR2_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Oka
Query: 1 YQYLLCL 7
YQYL CL
Sbjct: 41 YQYLDCL 47
>sp|RIR2_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Varicella-zoster virus (strain Dumas)
Query: 1 YQYLLCL 7
YQYL CL
Sbjct: 41 YQYLDCL 47
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 YQYLLCLG 8
Y Y++C G
Sbjct: 62 YMYMICYG 69
>sp|RDRP_ROTHS|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLISLGIP 968
>sp|RDRP_ROTHL|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLISLGIP 968
>sp|RDRP_ROTHD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLISLGIP 968
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLISLGIP 968
>sp|RDRP_ROTH6|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLISLGIP 968
>sp|RDRP_ROT41|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLISLGIP 968
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 3 YLLCLG 8
Y LCLG
Sbjct: 571 YFLCLG 576
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 3 YLLCLG 8
Y LCLG
Sbjct: 566 YFLCLG 571
>sp|DNBI_ADE07|PROBABLE DNA-binding protein|Human adenovirus B serotype 7
Query: 3 YLLCLGM 9
Y++C+GM
Sbjct: 80 YVVCIGM 86
>sp|RDRP_ROTH3|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGIP 968
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 5 LCLGMP 10
LC+G+P
Sbjct: 210 LCVGLP 215
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 YQYLLCLGMP 10
Y Y L LG+P
Sbjct: 1199 YTYNLELGLP 1208
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 YQYLLCLGMP 10
Y Y L LG+P
Sbjct: 1199 YTYNLELGLP 1208
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 YQYLLCLGMP 10
Y Y L LG+P
Sbjct: 1199 YTYNLELGLP 1208
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 YQYLLCLGMP 10
Y Y L LG+P
Sbjct: 1199 YTYNLELGLP 1208
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 YQYLLCLGMP 10
Y Y L LG+P
Sbjct: 1199 YTYNLELGLP 1208
>sp|RDRP_ROTYO|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|RDRP_ROTWI|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|RDRP_ROTHW|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|RDRP_ROTHT|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|RDRP_ROTHP|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|RDRP_ROTHK|RNA-DIRECTED RNA polymerase|Rotavirus A (strain
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|RDRP_ROTAD|RNA-DIRECTED RNA polymerase|Rotavirus A (strain RVA/Human/United
Query: 3 YLLCLGMP 10
YL+ LG+P
Sbjct: 961 YLVSLGVP 968
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 YLLCL 7
YLLCL
Sbjct: 2015 YLLCL 2019
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 QYLLCLGMP 10
QY LG P
Sbjct: 308 QYFAVLGFP 316
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 4 LLCLGM 9
LLCLG+
Sbjct: 1150 LLCLGV 1155
>sp|US17_HCMVM|PROTEIN US17|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YLLCLGM 9
+LLCLG+
Sbjct: 55 FLLCLGL 61
>sp|US17_HCMVA|UNCHARACTERIZED protein HVLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YLLCLGM 9
+LLCLG+
Sbjct: 55 FLLCLGL 61
>sp|E1B55_ADE07|E1B 55 kDa protein|Human adenovirus B serotype 7
Query: 1 YQYLLCLG 8
YQ L C G
Sbjct: 352 YQMLTCAG 359
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 5 LCLGMP 10
+CLG P
Sbjct: 2055 ICLGFP 2060
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 5 LCLGMP 10
LC G+P
Sbjct: 210 LCAGLP 215
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YQYLLCL 7
Y YL CL
Sbjct: 46 YVYLYCL 52
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 YQYLLCL 7
Y YL CL
Sbjct: 46 YVYLYCL 52
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 4 LLCLGMP 10
L+C+G P
Sbjct: 285 LVCVGSP 291
>sp|US25_HCMVA|UNCHARACTERIZED protein US25|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 YQYLLCLGM 9
+ L+CLG+
Sbjct: 42 FATLICLGL 50
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 4 LLCLGMP 10
L+C+G P
Sbjct: 286 LVCVGSP 292
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 YLLCLGM 9
YL+C G+
Sbjct: 1835 YLVCRGL 1841
>sp|VU3_HHV7J|PROTEIN U3|Human herpesvirus 7 (strain JI)
Query: 1 YQYLLC 6
Y Y+LC
Sbjct: 195 YAYVLC 200
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 YQYLLCLG 8
Y Y CLG
Sbjct: 161 YGYPACLG 168
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 YQYLLCLG 8
Y Y CLG
Sbjct: 161 YGYPACLG 168
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 YQYLLCLG 8
Y Y CLG
Sbjct: 161 YGYPACLG 168
212|Sequence|1056|1065|CLGMPPALCI
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 2 LGMPPALCI 10
LG+PP +C+
Sbjct: 43 LGLPPGVCL 51
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CLGMPP 6
CLG PP
Sbjct: 2056 CLGFPP 2061
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 CLGMPPALCI 10
C G PA+CI
Sbjct: 459 CQGQCPAVCI 468
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LGMPPALCI 10
+GM P +C+
Sbjct: 553 VGMTPPICV 561
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CLGMPPALCI 10
C G PA+C+
Sbjct: 456 CEGRAPAVCL 465
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CLGMPPALCI 10
C G PA+C+
Sbjct: 456 CEGRAPAVCL 465
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CLGMPPALCI 10
C G PA+C+
Sbjct: 456 CEGRAPAVCL 465
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 GMPPAL 8
G+PPAL
Sbjct: 1281 GIPPAL 1286
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 PPALCI 10
PP LC+
Sbjct: 221 PPGLCL 226
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 2 LGMPPAL 8
LG+PP L
Sbjct: 1092 LGLPPHL 1098
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 4 MPPALC 9
M PALC
Sbjct: 438 MAPALC 443
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 MPPALC 9
M PALC
Sbjct: 438 MAPALC 443
>sp|GQ1_HHV6Z|GLYCOPROTEIN Q1|Human herpesvirus 6B (strain Z29)
Query: 4 MPPALC 9
M PALC
Sbjct: 430 MSPALC 435
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 LGMPPAL 8
LG+PP L
Sbjct: 1203 LGIPPLL 1209
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 GMPPALC 9
GMP +C
Sbjct: 1976 GMPSGIC 1982
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 5 PPALC 9
PP LC
Sbjct: 1102 PPGLC 1106
>sp|GLYC_CHAVB|PRE-GLYCOPROTEIN polyprotein GP complex|Chapare mammarenavirus (isolate
Query: 2 LGMPPALC 9
L PP LC
Sbjct: 156 LNYPPLLC 163
>sp|VSSGP_EBORE|SUPER small secreted glycoprotein|Reston ebolavirus (strain
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|VSSGP_EBORR|SUPER small secreted glycoprotein|Reston ebolavirus (strain Reston-89)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 CLGMPPALCI 10
CL M P + I
Sbjct: 709 CLSMKPDITI 718
>sp|VGP_EBORS|ENVELOPE glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype
Query: 2 LGMPPAL 8
LG PP L
Sbjct: 13 LGRPPTL 19
>sp|VSGP_EBORS|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Siena/Philippine-92) (REBOV)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|VSGP_EBORE|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 5 PPALCI 10
PP +C+
Sbjct: 318 PPVVCV 323
>sp|VSGP_EBORR|PRE-SMALL/SECRETED glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 122 CLPLPP 127
>sp|RIR1_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain HG52)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 391 CLDLPP 396
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 1 CLGMPP 6
CL +PP
Sbjct: 393 CLDLPP 398
>sp|Y168_ADE02|UNCHARACTERIZED protein C-168|Human adenovirus C serotype 2
Query: 1 CLGMPP 6
C+G PP
Sbjct: 112 CVGTPP 117
>sp|REV_HV1YF|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 CLGMPP 6
CLG PP
Sbjct: 63 CLGGPP 68
>sp|PG036_MONPV|PROTEIN OPG036|Monkeypox virus (MPXV)
Query: 1 CLGMPPAL--CI 10
C GM P++ CI
Sbjct: 26 CSGMDPSIIDCI 37
>sp|REV_HV190|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 CLGMPPA 7
CLG PP
Sbjct: 63 CLGRPPE 69
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PPALCI 10
PPA C+
Sbjct: 46 PPARCV 51
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 LGMPPALC 9
+ +PPA+C
Sbjct: 134 VSLPPAIC 141
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 2 LGMPPALCI 10
L +PPA C+
Sbjct: 220 LRIPPAACL 228
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 2 LGMPPALCI 10
L +PPA C+
Sbjct: 220 LRIPPAACL 228
>sp|YL11_ADE41|UNCHARACTERIZED 16.5 kDa protein in|Human adenovirus F serotype 41
Query: 2 LGMPPALCI 10
L PP LC+
Sbjct: 122 LTFPPKLCV 130
213|Sequence|1061|1070|PALCIDYPWR
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 PALCIDY 7
P LC+DY
Sbjct: 28 PHLCLDY 34
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 PALCIDY 7
P LC+DY
Sbjct: 28 PHLCLDY 34
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 PALCIDY 7
P LC+DY
Sbjct: 28 PHLCLDY 34
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 PALCIDY 7
P LC+DY
Sbjct: 28 PHLCLDY 34
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 LCIDYPWR 10
LCI Y W+
Sbjct: 2127 LCIGYSWK 2134
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 CIDYPW 9
C+++PW
Sbjct: 49 CVNHPW 54
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 CIDYPW 9
C+++PW
Sbjct: 49 CVNHPW 54
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 606 PRCMVDYPYR 615
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PALCIDYPWR 10
P IDYP+R
Sbjct: 609 PRCLIDYPYR 618
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 PALCIDYPWR 10
P IDYP+R
Sbjct: 605 PRCLIDYPYR 614
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 PALCIDYPWR 10
P IDYP+R
Sbjct: 609 PRCLIDYPYR 618
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 609 PKCMVDYPYR 618
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCIVDYPYR 614
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCMVDYPYR 614
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 613 PRCLVDYPYR 622
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 609 PRCLVDYPYR 618
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCMVDYPYR 614
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 610 PRCLVDYPYR 619
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCLVDYPYR 614
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCLVDYPYR 614
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 610 PRCLVDYPYR 619
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 609 PRCLVDYPYR 618
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCMVDYPYR 614
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 603 PRCLVDYPYR 612
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCMVDYPYR 614
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 611 PRCMVDYPYR 620
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCLVDYPYR 614
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 610 PRCLVDYPYR 619
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 609 PRCLVDYPYR 618
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCMVDYPYR 614
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 611 PRCLVDYPYR 620
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCLVDYPYR 614
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCLVDYPYR 614
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LCIDYPWR 10
L +DY W+
Sbjct: 1286 LSLDYAWK 1293
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 609 PRCLVDYPYR 618
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 PALCIDYP 8
P +C+ YP
Sbjct: 84 PCICLIYP 91
>sp|SPI2B_VACCC|PUTATIVE serine proteinase inhibitor 2|Vaccinia virus (strain Copenhagen)
Query: 3 LCIDYPW 9
C+D+P+
Sbjct: 192 FCVDHPF 198
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PALCIDY 7
P+LC D+
Sbjct: 1274 PSLCTDF 1280
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PALCIDY 7
P+LC D+
Sbjct: 1274 PSLCTDF 1280
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PALCIDY 7
P+LC D+
Sbjct: 1274 PSLCTDF 1280
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 1 PALCIDYPWR 10
P +DYP+R
Sbjct: 605 PRCLVDYPYR 614
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ALCIDYP 8
LC+D P
Sbjct: 5962 GLCVDIP 5968
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 4 CIDYPW 9
C D PW
Sbjct: 1089 CNDSPW 1094
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 ALCIDYP 8
LC+D P
Sbjct: 5939 GLCVDIP 5945
>sp|VE2_HPV1|REGULATORY protein E2|Human papillomavirus type 1 (Human
Query: 1 PALCIDYP 8
PA+ DYP
Sbjct: 211 PAVHSDYP 218
>sp|PRTP_HHV2|PROCESSING and transport protein|Human herpesvirus 2 (HHV-2) (Human
Query: 3 LCIDYPWR 10
L ++Y WR
Sbjct: 86 LLLEYAWR 93
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 3 LCIDYPWR 10
L ++Y WR
Sbjct: 86 LLLEYAWR 93
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 3 LCIDYPWR 10
L ++Y WR
Sbjct: 82 LLLEYAWR 89
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 3 LCIDYPWR 10
L ++Y WR
Sbjct: 82 LLLEYAWR 89
>sp|VP7_ROTH9|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 3 LCIDYP 8
LCI YP
Sbjct: 81 LCIYYP 86
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 3 LCIDYP 8
+CI YP
Sbjct: 1100 VCITYP 1105
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 LCIDYPWR 10
LC PW+
Sbjct: 1578 LCYGGPWK 1585
>sp|VE5_HPV13|PROBABLE protein E5|Human papillomavirus 13
Query: 1 PALCI 5
PALC+
Sbjct: 78 PALCV 82
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 LCIDYPWR 10
LC PW+
Sbjct: 1582 LCYGGPWK 1589
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 LCIDYPWR 10
LC PW+
Sbjct: 1582 LCYGGPWK 1589
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 PALCIDY 7
PAL +DY
Sbjct: 848 PALSLDY 854
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 3 LCIDYPW 9
LC+ PW
Sbjct: 300 LCLGGPW 306
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 PALCIDYPWR 10
P DY W+
Sbjct: 721 PTKVTDYAWQ 730
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 2 ALCIDY 7
ALC++Y
Sbjct: 447 ALCVNY 452
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 3 LCIDYPWR 10
L ++Y WR
Sbjct: 82 LLLEYAWR 89
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LCIDY 7
+CIDY
Sbjct: 735 VCIDY 739
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LCIDY 7
+CIDY
Sbjct: 735 VCIDY 739
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 PALCIDYPW 9
P C+ + W
Sbjct: 914 PVECVSHDW 922
214|Sequence|1066|1075|DYPWRWSRAV
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 PWRW 6
PWRW
Sbjct: 6438 PWRW 6441
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 PWRW 6
PWRW
Sbjct: 1078 PWRW 1081
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 PWRW 6
PWRW
Sbjct: 1079 PWRW 1082
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 PWRW 6
PWRW
Sbjct: 1080 PWRW 1083
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 PWRW 6
PWRW
Sbjct: 1091 PWRW 1094
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 WRWSRA 9
WRW++A
Sbjct: 1636 WRWAKA 1641
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 PWRW 6
PWRW
Sbjct: 1089 PWRW 1092
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 PWRW 6
PWRW
Sbjct: 1090 PWRW 1093
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 PWRW 6
PWRW
Sbjct: 1088 PWRW 1091
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 PWRW 6
PWRW
Sbjct: 1098 PWRW 1101
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 PWRW 6
PWRW
Sbjct: 1078 PWRW 1081
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 PWRW 6
PWRW
Sbjct: 1080 PWRW 1083
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 PWRW 6
PWRW
Sbjct: 1080 PWRW 1083
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 PWRW 6
PWRW
Sbjct: 1088 PWRW 1091
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 PWRW 6
PWRW
Sbjct: 1086 PWRW 1089
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 PWRW 6
PWRW
Sbjct: 1079 PWRW 1082
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 PWRW 6
PWRW
Sbjct: 1082 PWRW 1085
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 PWRW 6
PWRW
Sbjct: 1077 PWRW 1080
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 PWRW 6
PWRW
Sbjct: 1096 PWRW 1099
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 PWRWSR 8
PW+W R
Sbjct: 1107 PWQWLR 1112
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 PWRWSR 8
PW+W R
Sbjct: 1107 PWQWLR 1112
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1637 WRWCKA 1642
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1636 WRWCKA 1641
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1636 WRWCKA 1641
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1636 WRWCKA 1641
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1637 WRWCKA 1642
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1637 WRWCKA 1642
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1636 WRWCKA 1641
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 4 WRWSRA 9
WRW +A
Sbjct: 1636 WRWCKA 1641
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PWRWS 7
PWR+S
Sbjct: 112 PWRYS 116
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 PWRWSRA 9
PW W +A
Sbjct: 1091 PWAWIKA 1097
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 PWRWSRA 9
PW W +A
Sbjct: 1091 PWAWIKA 1097
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 PWRWSRA 9
PW W +A
Sbjct: 1091 PWAWIKA 1097
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 PWRWSRA 9
PW W +A
Sbjct: 1091 PWAWIKA 1097
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 DY-PWRW 6
DY PW+W
Sbjct: 1109 DYSPWQW 1115
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 YPWRW 6
+PW+W
Sbjct: 1258 HPWQW 1262
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 5 RWSRA 9
RWSRA
Sbjct: 439 RWSRA 443
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 PWRW 6
PW+W
Sbjct: 1105 PWQW 1108
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 PWRW 6
PW+W
Sbjct: 1105 PWQW 1108
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 3 PWRW 6
PW+W
Sbjct: 1105 PWQW 1108
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 PWRW 6
PW+W
Sbjct: 1104 PWQW 1107
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 PWRW 6
PW+W
Sbjct: 1104 PWQW 1107
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 DYPWRWSRAV 10
+YP WS A+
Sbjct: 328 NYPALWSYAM 337
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 1 DYPWRWSRAV 10
+YP WS A+
Sbjct: 328 NYPALWSYAM 337
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 DYPWRWSRAV 10
+YP WS A+
Sbjct: 328 NYPALWSYAM 337
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 5 RWSRA 9
RWSRA
Sbjct: 436 RWSRA 440
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 5 RWSRA 9
RWSRA
Sbjct: 437 RWSRA 441
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 2 YPWRWSRAV 10
Y W WS V
Sbjct: 312 YYWAWSAGV 320
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 1 DYPWRWSRAV 10
+YP WS A+
Sbjct: 327 NYPAIWSYAM 336
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 5 RWSRA 9
RWSRA
Sbjct: 437 RWSRA 441
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 5 RWSRA 9
RWSRA
Sbjct: 437 RWSRA 441
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 2 YPWRWSRAV 10
Y W WS V
Sbjct: 311 YYWAWSAGV 319
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 PWRWSRA 9
PW W ++
Sbjct: 1091 PWAWIKS 1097
>sp|NCAP_NIPAV|NUCLEOPROTEIN virus
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 327 YPLLWSFAM 335
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 329 YPLLWSYAM 337
>sp|UL03_HCMVA|UNCHARACTERIZED protein UL3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 YPWRWSRAV 10
YP WSR +
Sbjct: 69 YPPSWSRTI 77
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 4 WRWS 7
WRWS
Sbjct: 129 WRWS 132
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 WRWSRA 9
W+W A
Sbjct: 1726 WQWQEA 1731
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 WRWSRA 9
W+W A
Sbjct: 1746 WQWQEA 1751
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 WRWSRA 9
W+W A
Sbjct: 1776 WQWQEA 1781
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 WRWSRA 9
W+W A
Sbjct: 1726 WQWQEA 1731
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 WRWSRA 9
W+W A
Sbjct: 1746 WQWQEA 1751
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 WRWSRA 9
W+W A
Sbjct: 1776 WQWQEA 1781
>sp|NCAP_HENDH|NUCLEOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 YPWRWSRAV 10
YP WS A+
Sbjct: 327 YPLLWSFAM 335
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 4 WRWS 7
WRW+
Sbjct: 323 WRWT 326
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 4 WRWS 7
WRW+
Sbjct: 328 WRWT 331
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 2 YPWRWS 7
Y W WS
Sbjct: 214 YIWVWS 219
215|Sequence|1071|1080|WSRAVPMNSA
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 1 WSRAVPMNS 9
W R +P NS
Sbjct: 224 WKRNLPNNS 232
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 WSRAVPMN 8
WS +P N
Sbjct: 475 WSSTIPSN 482
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 WSRAVPMN 8
WS +P N
Sbjct: 475 WSSTIPSN 482
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 1 WSRAVPMNSA 10
W + VP N++
Sbjct: 195 WGQGVPCNAS 204
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 WSRAVP 6
W +AVP
Sbjct: 178 WDKAVP 183
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 2 SRAVPMNS 9
S A+P+NS
Sbjct: 635 SEALPINS 642
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 WSRAVP 6
W +AVP
Sbjct: 169 WDKAVP 174
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 WSRAVPMNS 9
W+R PM S
Sbjct: 99 WNRNGPMTS 107
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 WSRAVP 6
W RA+P
Sbjct: 169 WDRALP 174
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 WSRAVPMNSA 10
W+RA+P ++
Sbjct: 1205 WARALPAGTS 1214
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 WSRAVPMNSA 10
W+RA+P ++
Sbjct: 1205 WARALPAGTS 1214
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 5 VPMNSA 10
+PMNSA
Sbjct: 199 LPMNSA 204
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 WSRAVP 6
W RA+P
Sbjct: 171 WDRALP 176
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 WSRAVPMN 8
W+ VP+N
Sbjct: 277 WNETVPIN 284
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 WSRAVP 6
W +A+P
Sbjct: 169 WDKAIP 174
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 WSRAVP 6
W +A+P
Sbjct: 169 WEKAIP 174
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 WSRAVPMNSA 10
W +A+P A
Sbjct: 169 WEKALPCGDA 178
>sp|CCU83_HHV6U|PUTATIVE CC-type chemokine U83|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 WSRAVP 6
WS AVP
Sbjct: 36 WSAAVP 41
216|Sequence|1076|1085|PMNSALIKWL
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 PMNS----ALIKWL 10
PM S ALI+WL
Sbjct: 82 PMGSGKTTALIRWL 95
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 PMNS----ALIKWL 10
PM S ALI+WL
Sbjct: 100 PMGSGKTTALIRWL 113
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 1 PMNSALIKWL 10
P+ AL+ WL
Sbjct: 270 PLYEALVAWL 279
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 1 PMNSALIKWL 10
P+ AL+ WL
Sbjct: 270 PLYEALVAWL 279
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 5 ALIKWL 10
ALI+WL
Sbjct: 423 ALIEWL 428
>sp|VE1_HPV19|REPLICATION protein E1|Human papillomavirus 19
Query: 1 PMNSALIKWL 10
P NS + WL
Sbjct: 339 PENSNAVAWL 348
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 1 PMNSALIKWL 10
P NS + WL
Sbjct: 340 PENSNAVAWL 349
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 NSALIKWL 10
++AL+ WL
Sbjct: 819 DTALVSWL 826
Query: 1 PMNSALIKWL 10
P+N+ L W+
Sbjct: 2607 PVNNQLPSWV 2616
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 NSALIKWL 10
++AL+ WL
Sbjct: 819 DTALVSWL 826
Query: 1 PMNSALIKWL 10
P+N+ L W+
Sbjct: 2607 PVNNQLPSWV 2616
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PMNSALIKW 9
PM + +I W
Sbjct: 979 PMETKVITW 987
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 MNSALIKW 9
+N+AL+ W
Sbjct: 388 INNALVLW 395
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 MNSALIKW 9
+N+AL+ W
Sbjct: 388 INNALVLW 395
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 MNSALIKWL 10
+N+A I W+
Sbjct: 1275 LNAAAIAWM 1283
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 MNSALIKWL 10
+N+A I W+
Sbjct: 1275 LNAAAIAWM 1283
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 MNSALIKWL 10
+N+A I W+
Sbjct: 1275 LNAAAIAWM 1283
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 MNSALIKWL 10
+N+A I W+
Sbjct: 1275 LNAAAIAWM 1283
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 MNSALIKWL 10
+N+A I W+
Sbjct: 1203 LNAAAIAWM 1211
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PMNSALIKW 9
PM +I W
Sbjct: 976 PMEKKIITW 984
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 PMNSALIKW 9
PM +I W
Sbjct: 983 PMEKKIITW 991
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PMNSALIKW 9
PM +I W
Sbjct: 983 PMEKKIITW 991
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PMNSALIKW 9
PM +I W
Sbjct: 982 PMEKKIITW 990
217|Sequence|1081|1090|LIKWLYLPDF
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LIKWLYLP 8
L++WLY+P
Sbjct: 375 LLEWLYVP 382
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LIKWLYLP 8
L++WLY+P
Sbjct: 375 LLEWLYVP 382
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 KWLYLPDF 10
KWL LPD+
Sbjct: 2077 KWLDLPDY 2084
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 KWLYLPDF 10
KWL LPD+
Sbjct: 2077 KWLDLPDY 2084
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 KWLYLPDF 10
KWL LPD+
Sbjct: 2077 KWLDLPDY 2084
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 KWLYLP 8
KW YLP
Sbjct: 159 KWKYLP 164
>sp|PG049_VACCC|PROTEIN OPG049|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KWLYLP 8
KW YLP
Sbjct: 159 KWKYLP 164
>sp|PG049_MONPV|PROTEIN OPG049|Monkeypox virus (MPXV)
Query: 3 KWLYLP 8
KW YLP
Sbjct: 158 KWKYLP 163
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 5 LYLPDF 10
LY+PDF
Sbjct: 1240 LYIPDF 1245
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 5 LYLPDF 10
LY+PDF
Sbjct: 1240 LYIPDF 1245
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 IKWLYLP 8
I+W+Y P
Sbjct: 243 IQWMYRP 249
>sp|GAG_HV2G1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 IKWLYLP 8
I+W+Y P
Sbjct: 249 IQWMYRP 255
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 IKWLYLP 8
I+W+Y P
Sbjct: 243 IQWMYRP 249
>sp|GAG_HV2BE|GAG polyprotein|Human immunodeficiency virus type 2
Query: 2 IKWLYLP 8
I+W+Y P
Sbjct: 248 IQWMYRP 254
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 IKWLYLP 8
I+W+Y P
Sbjct: 248 IQWMYRP 254
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 IKWLYLP 8
I+W+Y P
Sbjct: 249 IQWMYRP 255
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 5 LYLPDF 10
LY PDF
Sbjct: 1240 LYFPDF 1245
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 LIKWLYLPDF 10
++ +Y+PDF
Sbjct: 483 VVNKIYIPDF 492
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LIKWLYLPDF 10
++ +Y+PDF
Sbjct: 483 VVNKIYIPDF 492
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LIKWLYLPDF 10
++ +Y+PDF
Sbjct: 483 VVNKIYIPDF 492
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LIKWLYLPDF 10
++ +Y+PDF
Sbjct: 483 VVNKIYIPDF 492
>sp|PG049_VAR67|PROTEIN OPG049|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LIKWLYLP 8
L +W YLP
Sbjct: 157 LDRWKYLP 164
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 LIKWLYLPDF 10
++ +Y+PDF
Sbjct: 485 VVNKIYIPDF 494
>sp|ORF23_TTVV4|PROBABLE protein VP2|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 LIKWLYLPD 9
L+ WL PD
Sbjct: 117 LLDWLDAPD 125
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 5 LYLPD 9
LYLPD
Sbjct: 397 LYLPD 401
>sp|US18_HCMVT|TRANSMEMBRANE protein HWLF5|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 LIKWLYLPD 9
L+ WL PD
Sbjct: 62 LLAWLAFPD 70
>sp|US18_HCMVM|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LIKWLYLPD 9
L+ WL PD
Sbjct: 62 LLAWLAFPD 70
>sp|US18_HCMVA|TRANSMEMBRANE protein US18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LIKWLYLPD 9
L+ WL PD
Sbjct: 62 LLAWLAFPD 70
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 WLYLP 8
WLY P
Sbjct: 1601 WLYFP 1605
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 3 KWLYLPD 9
KW LPD
Sbjct: 378 KWKMLPD 384
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 3 KWLYLPD 9
KW LPD
Sbjct: 378 KWKLLPD 384
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 5 LYLPD 9
LYLPD
Sbjct: 470 LYLPD 474
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 5 LYLPD 9
LYLPD
Sbjct: 450 LYLPD 454
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 5 LYLPD 9
LYLPD
Sbjct: 471 LYLPD 475
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 3 KWLYLPDF 10
KW+ LP+
Sbjct: 333 KWIRLPNL 340
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 5 LYLPD 9
LYLPD
Sbjct: 464 LYLPD 468
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 3 KWLYLPDF 10
KW+ LP+
Sbjct: 333 KWIRLPNL 340
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KWLYLPDF 10
KW+ LP+
Sbjct: 333 KWIRLPNL 340
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 5 LYLPD 9
LYLPD
Sbjct: 467 LYLPD 471
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 5 LYLPD 9
LYLPD
Sbjct: 452 LYLPD 456
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 WLYLP 8
W+YLP
Sbjct: 1191 WMYLP 1195
>sp|ORF24_TTVV4|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 LIKWLYLPD 9
L+ WL PD
Sbjct: 117 LLDWLDAPD 125
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 4 WLYLP 8
WLY P
Sbjct: 549 WLYSP 553
Query: 3 KWLYL 7
KWL+L
Sbjct: 454 KWLFL 458
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IKWLYLPD 9
IK+L +PD
Sbjct: 79 IKYLAIPD 86
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IKWLYLPD 9
IK+L +PD
Sbjct: 79 IKYLAIPD 86
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 2 IKWLYLPD 9
IK+L +PD
Sbjct: 79 IKYLAIPD 86
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 WLYLPD 9
W Y+P+
Sbjct: 651 WQYIPE 656
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 LIKWLYLPD 9
++ W LPD
Sbjct: 329 VLSWCGLPD 337
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 LIKWLYLPD 9
++ W LPD
Sbjct: 329 VLSWCGLPD 337
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 1 LIKWL 5
L+KWL
Sbjct: 24 LVKWL 28
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 LIKWL 5
LIKWL
Sbjct: 188 LIKWL 192
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 LIKWL 5
LIKWL
Sbjct: 188 LIKWL 192
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 LIKWL 5
LIKWL
Sbjct: 188 LIKWL 192
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 LIKWL 5
LIKWL
Sbjct: 188 LIKWL 192
218|Sequence|1086|1095|YLPDFFRAPN
>sp|K15_HHV8P|PROTEIN K15|Human herpesvirus 8 type P
Query: 2 LPDFFRAP 9
LP FFR P
Sbjct: 389 LPPFFRQP 396
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 3 PDFFRAP 9
PDF RAP
Sbjct: 305 PDFSRAP 311
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 2 LPDFFRAPN 10
LPD F PN
Sbjct: 5 LPDIFFFPN 13
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 LPDFFRAPN 10
LPD F PN
Sbjct: 5 LPDIFFFPN 13
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 2 LPDFFRAPN 10
LPD F PN
Sbjct: 5 LPDIFFFPN 13
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LPDFFRAPN 10
LPD F PN
Sbjct: 5 LPDIFFFPN 13
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LPDFFRAPN 10
LPD F PN
Sbjct: 5 LPDIFFFPN 13
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 LPDFFRAPN 10
LPD F PN
Sbjct: 5 LPDIFFFPN 13
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 1 YLPDFFRAPN 10
Y P F+ PN
Sbjct: 69 YQPTTFKPPN 78
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 YLPDFFRAPN 10
Y P F+ PN
Sbjct: 69 YQPTTFKPPN 78
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 YLPDFFRAPN 10
Y P F+ PN
Sbjct: 69 YQPTTFKPPN 78
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 5 FFRAPN 10
+FR PN
Sbjct: 921 YFRCPN 926
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 1 YLPDF 5
Y+PDF
Sbjct: 488 YIPDF 492
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 YLPDF 5
Y+PDF
Sbjct: 488 YIPDF 492
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 YLPDF----FRAPN 10
Y+PD+ F++P+
Sbjct: 308 YIPDYYEKWFKSPD 321
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 YLPDF 5
Y+PDF
Sbjct: 488 YIPDF 492
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 YLPDF 5
Y+PDF
Sbjct: 488 YIPDF 492
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 1 YLPDF 5
Y+PDF
Sbjct: 490 YIPDF 494
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 YLPDFFR 7
Y+P+F+R
Sbjct: 507 YIPEFYR 513
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 2 LPDFF 6
LPDFF
Sbjct: 4 LPDFF 8
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 YLPDF 5
Y+PDF
Sbjct: 1241 YIPDF 1245
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 YLPDF 5
Y+PDF
Sbjct: 1241 YIPDF 1245
>sp|UL56_HHV1E|PROTEIN UL56|Human herpesvirus 1 (strain HFEM)
Query: 3 PDFFRAPN 10
P FFR P
Sbjct: 111 PSFFRKPG 118
219|Sequence|1091|1100|FRAPNSTNLI
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 FRAPN 5
FRAPN
Sbjct: 762 FRAPN 766
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 FRAPNS 6
FR PNS
Sbjct: 922 FRCPNS 927
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 PNSTNL 9
PN TNL
Sbjct: 565 PNRTNL 570
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 RAPNSTNLI 10
R P +TN+I
Sbjct: 768 RLPETTNVI 776
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 RAPNSTNL 9
R PN TNL
Sbjct: 315 RFPNITNL 322
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 RAPNSTNL 9
R PN TNL
Sbjct: 328 RFPNITNL 335
220|Sequence|1096|1105|STNLISDFLL
>sp|NSP2_ROTJ1|NON-STRUCTURAL protein 2|Rotavirus X (strain
Query: 1 STNLISDFLL 10
+ NLI+D+LL
Sbjct: 88 TRNLITDWLL 97
>sp|NSP2_ROTB2|NON-STRUCTURAL protein 2|Rotavirus X (isolate
Query: 1 STNLISDFLL 10
+ NLI+D+LL
Sbjct: 88 TRNLITDWLL 97
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 NLISDFLL 10
NLI+D+LL
Sbjct: 120 NLIADWLL 127
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 STNLISDF 8
+TNLIS F
Sbjct: 341 TTNLISPF 348
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 STNLISDF 8
+TNLIS F
Sbjct: 341 TTNLISPF 348
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 TNLISDFL 9
+NLI DF+
Sbjct: 1873 SNLIKDFV 1880
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 3 NLISDF 8
NLISD+
Sbjct: 287 NLISDY 292
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 NLISDF 8
NLISD+
Sbjct: 287 NLISDY 292
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 NLISDF 8
NLISD+
Sbjct: 287 NLISDY 292
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 LISDFLL 10
LISD+LL
Sbjct: 121 LISDWLL 127
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 LISDFLL 10
LISD+LL
Sbjct: 121 LISDWLL 127
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 LISDFLL 10
LISD+LL
Sbjct: 121 LISDWLL 127
>sp|UL32_HHV7J|PACKAGING protein UL32|Human herpesvirus 7 (strain JI)
Query: 4 LISDFL 9
LISDFL
Sbjct: 455 LISDFL 460
221|Sequence|1101|1110|SDFLLLLCAS
>sp|NCAP_EBOSU|NUCLEOPROTEIN ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV)
Query: 3 FLLLLC 8
FLLLLC
Sbjct: 73 FLLLLC 78
>sp|NCAP_EBOSB|NUCLEOPROTEIN ebolavirus (strain Boniface-76) (SEBOV)
Query: 3 FLLLLC 8
FLLLLC
Sbjct: 73 FLLLLC 78
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 FLLLLC 8
FLL+LC
Sbjct: 73 FLLMLC 78
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 FLLLLC 8
FLL+LC
Sbjct: 73 FLLMLC 78
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 3 FLLLLC 8
FLL+LC
Sbjct: 73 FLLMLC 78
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 3 FLLLLC 8
FLL+LC
Sbjct: 73 FLLMLC 78
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 3 FLLLLC 8
FLL+LC
Sbjct: 73 FLLMLC 78
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 3 FLLLLCAS 10
F LLLC S
Sbjct: 608 FHLLLCVS 615
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 FLLLLCA 9
FLL LC+
Sbjct: 2246 FLLTLCS 2252
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 FLLLLCA 9
FLL LC+
Sbjct: 2246 FLLTLCS 2252
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 FLLLLCA 9
FLL LC+
Sbjct: 2246 FLLTLCS 2252
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 FLLLLCA 9
FLL LC+
Sbjct: 2246 FLLTLCS 2252
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 FLLLLCA 9
FLL LC+
Sbjct: 2246 FLLTLCS 2252
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 FLLLLCA 9
FLL LC+
Sbjct: 2246 FLLTLCS 2252
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SDFLLLLCA 9
S +LLLCA
Sbjct: 132 SQEILLLCA 140
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SDFLLLLCA 9
S +LLLCA
Sbjct: 132 SQEILLLCA 140
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 DFLLLLCA 9
D+L L+C
Sbjct: 448 DYLALICG 455
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 DFLLLLCA 9
D+L L+C
Sbjct: 448 DYLALICG 455
222|Sequence|1106|1115|LLCASQQWQV
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LLCASQQWQ 9
L CA Q WQ
Sbjct: 426 LECAKQYWQ 434
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLCASQQWQ 9
L CA Q WQ
Sbjct: 426 LECAKQYWQ 434
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LCASQQWQ 9
L ASQ WQ
Sbjct: 6774 LQASQAWQ 6781
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 CASQQWQV 10
C S+ W V
Sbjct: 247 CGSESWSV 254
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 CASQQWQV 10
C S+ W V
Sbjct: 247 CGSESWSV 254
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 5 SQQWQV 10
SQQW V
Sbjct: 163 SQQWAV 168
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 1 LLCASQQWQV 10
+ C S QW++
Sbjct: 173 ITCNSAQWEI 182
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 CASQQW 8
CA Q W
Sbjct: 1440 CAEQGW 1445
>sp|PG067_VARV|PROTEIN OPG067|Variola virus
Query: 3 CASQQWQV 10
C S +W++
Sbjct: 191 CRSNKWRI 198
>sp|PG067_VAR67|PROTEIN OPG067|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 CASQQWQV 10
C S +W++
Sbjct: 191 CRSNKWRI 198
>sp|PG067_VACCD|PROTEIN OPG067|Vaccinia virus (strain Dairen I)
Query: 3 CASQQWQV 10
C S +W++
Sbjct: 191 CRSNKWRI 198
>sp|PG067_VACCC|PROTEIN OPG067|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CASQQWQV 10
C S +W++
Sbjct: 191 CRSNKWRI 198
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 3 CASQQW 8
C S QW
Sbjct: 242 CFSSQW 247
223|Sequence|1111|1120|QQWQVFSAER
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 QWQVFSAE 9
+WQVF E
Sbjct: 360 EWQVFGTE 367
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 2 QWQVFSAE 9
+WQVF E
Sbjct: 360 EWQVFGTE 367
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QQWQVFSA 8
Q WQ F +
Sbjct: 298 QHWQTFDS 305
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QQWQVFSA 8
Q WQ F +
Sbjct: 298 QHWQTFDS 305
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QQWQVFSA 8
Q WQ F +
Sbjct: 298 QHWQTFDS 305
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 QWQVFS 7
QW+VF+
Sbjct: 1337 QWKVFT 1342
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 QWQVFS 7
QW+VF+
Sbjct: 1338 QWKVFT 1343
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 QWQVFS 7
QW+VF+
Sbjct: 1338 QWKVFT 1343
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 QWQVFS 7
QW+VF+
Sbjct: 1337 QWKVFT 1342
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 QWQVFS 7
QW+VF+
Sbjct: 1337 QWKVFT 1342
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 QWQVFSAE 9
QW+VF+ +
Sbjct: 1338 QWKVFTPK 1345
224|Sequence|1116|1125|FSAERTEEWQ
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 FSAERTEEW 9
FS ERT W
Sbjct: 1050 FSQERTSRW 1058
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 3 AERTEEW 9
AER EEW
Sbjct: 77 AERNEEW 83
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 AERTEEWQ 10
AER EEW+
Sbjct: 439 AERMEEWE 446
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 1 FSAERTEEW 9
F+ ERT W
Sbjct: 1058 FAKERTSSW 1066
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 1 FSAERTEEW 9
F+ ERT W
Sbjct: 1058 FARERTSSW 1066
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 1 FSAERTEEW 9
F+ ERT W
Sbjct: 1058 FARERTSSW 1066
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 4 ERTEEW 9
ERT EW
Sbjct: 128 ERTTEW 133
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 FSAERTEEW 9
SAERT W
Sbjct: 1326 LSAERTVRW 1334
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 FSAERTEEW 9
SAERT W
Sbjct: 1325 LSAERTVRW 1333
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 FSAERTEEW 9
SAERT W
Sbjct: 1325 LSAERTVRW 1333
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 ERTEEW 9
ERT EW
Sbjct: 128 ERTTEW 133
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 4 ERTEEW 9
ERT EW
Sbjct: 128 ERTTEW 133
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 4 ERTEEW 9
ERTE+W
Sbjct: 23 ERTEDW 28
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 FSAERTEEW 9
FSA +E W
Sbjct: 228 FSAYSSERW 236
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 1 FSAERTEE 8
SAE TEE
Sbjct: 208 LSAETTEE 215
>sp|3BHS_VACCA|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Vaccinia
Query: 4 ERTEEW 9
ERT +W
Sbjct: 336 ERTRKW 341
>sp|3BHS_MONPV|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Monkeypox
Query: 4 ERTEEW 9
ERT +W
Sbjct: 336 ERTRKW 341
>sp|VE2_HPV18|REGULATORY protein E2|Human papillomavirus type 18
Query: 2 SAERTEEW 9
SA +TE+W
Sbjct: 89 SAYKTEDW 96
225|Sequence|1121|1130|TEEWQRMAGV
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EEWQRMAG 9
++W RM G
Sbjct: 392 QDWMRMTG 399
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 2 EEWQRMAGV 10
E W+++AG+
Sbjct: 261 ESWRQLAGL 269
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 2 EEWQRMAGV 10
E W+++AG+
Sbjct: 261 ESWRQLAGL 269
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 EEWQRMA 8
E+WQR+
Sbjct: 3762 EDWQRIG 3768
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 TEEWQRMAG 9
T+EW ++ G
Sbjct: 2168 TKEWYKLVG 2176
Query: 2 EEWQRMAGV 10
+ W+ AGV
Sbjct: 438 DNWKSFAGV 446
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 TEEWQRMAG 9
T+EW ++ G
Sbjct: 2168 TKEWYKLVG 2176
Query: 2 EEWQRMAGV 10
+ W+ AGV
Sbjct: 438 DNWKSFAGV 446
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 TEEWQRMAG 9
T+EW ++ G
Sbjct: 2168 TKEWYKLVG 2176
Query: 2 EEWQRMAGV 10
+ W+ AGV
Sbjct: 438 DNWKSFAGV 446
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 EWQRMAG 9
+W MAG
Sbjct: 671 QWDSMAG 677
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 TEEWQ 5
TEEW+
Sbjct: 87 TEEWE 91
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TEEWQ 5
TEEW+
Sbjct: 85 TEEWE 89
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 TEEWQ 5
TEEW+
Sbjct: 87 TEEWE 91
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 2 EEWQRM 7
++WQR+
Sbjct: 238 QDWQRL 243
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 EEWQRM 7
++WQR+
Sbjct: 239 QDWQRL 244
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 2 EEWQRM 7
++WQR+
Sbjct: 239 QDWQRL 244
226|Sequence|1126|1135|RMAGVNTDRL
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 RMAGVNTDR 9
R+AG+N R
Sbjct: 604 RLAGINITR 612
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 RMAGVNTDR 9
R+AG+N R
Sbjct: 603 RLAGINITR 611
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 RMAGVNTDR 9
R+AG+N R
Sbjct: 603 RLAGINITR 611
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 RMAGVNTDR 9
R+AG+N R
Sbjct: 604 RLAGINITR 612
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 RMAGVNTDR 9
R+AG+N R
Sbjct: 603 RLAGINITR 611
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 RMAGVNTDR 9
R+AG+N R
Sbjct: 603 RLAGINITR 611
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RMAGVNTDRL 10
RM G NT L
Sbjct: 396 RMTGTNTHML 405
227|Sequence|1131|1140|NTDRLEPLRG
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 1 NTDRLEPLR 9
NTD ++P++
Sbjct: 30 NTDHIDPIK 38
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 1 NTDRLEPLR 9
NTD ++P++
Sbjct: 30 NTDHIDPIK 38
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 1 NTDRLEPLR 9
NTD ++P++
Sbjct: 30 NTDHIDPIK 38
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 NTDRLEPLR 9
NTD ++P++
Sbjct: 30 NTDHIDPIK 38
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 1 NTDRLEPLR 9
NTD ++P++
Sbjct: 30 NTDHIDPIK 38
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 NTDRLEPLR 9
+ RLEPL+
Sbjct: 2638 DVHRLEPLK 2646
>sp|TERM_ADE40|PRETERMINAL protein|Human adenovirus F serotype 40
Query: 5 LEPLRG 10
L+PLRG
Sbjct: 169 LQPLRG 174
228|Sequence|1136|1145|EPLRGEPNPV
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PLRGEPNP 9
P RGEP P
Sbjct: 754 PARGEPAP 761
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PLRGEPNP 9
P RGEP P
Sbjct: 754 PARGEPAP 761
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 3 LRGEPNPV 10
+RGEP P+
Sbjct: 453 IRGEPCPL 460
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 3 LRGEPNPV 10
L G PNPV
Sbjct: 904 LDGVPNPV 911
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LRGEPNPV 10
L G PNPV
Sbjct: 904 LDGVPNPV 911
>sp|VE2_HPV56|REGULATORY protein E2|Human papillomavirus 56
Query: 3 LRGEPN 8
L+GEPN
Sbjct: 240 LKGEPN 245
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 3 LRGEPN 8
L+GEPN
Sbjct: 303 LKGEPN 308
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 3 LRGEPNPV 10
+RG P+PV
Sbjct: 887 IRGFPDPV 894
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 EPLRGE 6
EPLRGE
Sbjct: 761 EPLRGE 766
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 3 LRGEPN 8
+RGEPN
Sbjct: 419 VRGEPN 424
>sp|VE2_HPV10|REGULATORY protein E2|Human papillomavirus type 10
Query: 3 LRGEPN 8
LRG+PN
Sbjct: 301 LRGDPN 306
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 GEPNPV 10
GEP PV
Sbjct: 2422 GEPKPV 2427
Query: 2 PLRGEPNP 9
P RG+P P
Sbjct: 1816 PGRGDPFP 1823
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 EPLRGE 6
EPLRGE
Sbjct: 694 EPLRGE 699
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 3 LRGEPN 8
+RGEPN
Sbjct: 425 VRGEPN 430
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 EPLRGE 6
EPLRGE
Sbjct: 765 EPLRGE 770
>sp|SHUT_VZVD|VIRION host shutoff protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PLRGEPN 8
P RG PN
Sbjct: 185 PSRGHPN 191
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 2 PLRGEPNP 9
PL+G NP
Sbjct: 661 PLKGTTNP 668
>sp|VE2_HPV03|REGULATORY protein E2|Human papillomavirus 3
Query: 3 LRGEPN 8
LRG+PN
Sbjct: 307 LRGDPN 312
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 PLRGEPNP 9
P RG+P P
Sbjct: 1816 PGRGDPFP 1823
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EPLRGEPNPV 10
+PL P PV
Sbjct: 454 DPLGDSPQPV 463
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 3 LRGEPN 8
+RGEPN
Sbjct: 415 VRGEPN 420
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EPLRGEPNPV 10
+PL P PV
Sbjct: 454 DPLGDSPQPV 463
>sp|VE2_HPV29|REGULATORY protein E2|Human papillomavirus 29
Query: 3 LRGEPN 8
LRG+PN
Sbjct: 313 LRGDPN 318
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|VE2_HPV61|REGULATORY protein E2|Human papillomavirus type 61
Query: 3 LRGEPN 8
L+G+PN
Sbjct: 305 LKGDPN 310
>sp|VE2_HPV58|REGULATORY protein E2|Human papillomavirus 58
Query: 3 LRGEPN 8
L+G+PN
Sbjct: 284 LKGDPN 289
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 3 LRGEPN 8
L+G+PN
Sbjct: 293 LKGDPN 298
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2394 PLEGEP 2399
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2394 PLEGEP 2399
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2401 PLEGEP 2406
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2401 PLEGEP 2406
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2396 PLEGEP 2401
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2394 PLEGEP 2399
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2401 PLEGEP 2406
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2394 PLEGEP 2399
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2401 PLEGEP 2406
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2394 PLEGEP 2399
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2400 PLEGEP 2405
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2397 PLEGEP 2402
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2403 PLEGEP 2408
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2399 PLEGEP 2404
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2390 PLEGEP 2395
>sp|VE2_HPV49|REGULATORY protein E2|Human papillomavirus type 49
Query: 3 LRGEPN 8
LRG+PN
Sbjct: 410 LRGDPN 415
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2400 PLEGEP 2405
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2398 PLEGEP 2403
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 EPLRG 5
EPLRG
Sbjct: 266 EPLRG 270
>sp|VE8E2_HPV58|PROTEIN E8^E2C|Human papillomavirus 58
Query: 3 LRGEPN 8
L+G+PN
Sbjct: 97 LKGDPN 102
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2396 PLEGEP 2401
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 PLRGEPNP 9
PL G NP
Sbjct: 661 PLEGTTNP 668
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 LRGEPN 8
+RG+PN
Sbjct: 405 VRGDPN 410
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2396 PLEGEP 2401
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 LRGEPNPV 10
+RGE NP+
Sbjct: 460 VRGEDNPL 467
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 3 LRGEPN 8
L+G+PN
Sbjct: 300 LKGDPN 305
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 PLRGEPNP 9
PL G NP
Sbjct: 661 PLEGTTNP 668
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PLRGEP 7
PL GEP
Sbjct: 2394 PLEGEP 2399
229|Sequence|1141|1150|EPNPVPNFIH
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 1 EPNPVPNFIH 10
E NP PN+I
Sbjct: 322 ESNPGPNYIQ 331
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 1 EPNPVPNFIH 10
E NP PN+I
Sbjct: 322 ESNPGPNYIQ 331
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 PNPVPNF 8
P P PNF
Sbjct: 2076 PKPAPNF 2082
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PNPVPNF 8
P P PNF
Sbjct: 2076 PKPAPNF 2082
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 PNPVPNF 8
PN VPN+
Sbjct: 1777 PNRVPNY 1783
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 PNPVPNF 8
PN VPN+
Sbjct: 1777 PNRVPNY 1783
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 PNPVPNF 8
PN VPN+
Sbjct: 1777 PNRVPNY 1783
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 PNPVPNF 8
PN VPN+
Sbjct: 1777 PNRVPNY 1783
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 EPNPVP 6
+PNPVP
Sbjct: 254 QPNPVP 259
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 3 NPVPNF 8
NPVPN
Sbjct: 194 NPVPNL 199
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PNPVPNFIH 10
P PV NF++
Sbjct: 1586 PTPVNNFLY 1594
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PNPVPNFIH 10
P PV NF++
Sbjct: 1586 PTPVNNFLY 1594
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|VP4_ROTHU|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 NPVPNFI 9
NPVPN +
Sbjct: 193 NPVPNAV 199
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P+P PN+
Sbjct: 2072 PSPAPNY 2078
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 EPNPVPNFI 9
E NPV N+I
Sbjct: 569 EQNPVENYI 577
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 PNPVP 6
PNPVP
Sbjct: 793 PNPVP 797
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 EPNPVPNF 8
EPNP NF
Sbjct: 150 EPNPRLNF 157
>sp|GAG_HV2D1|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 EPNPVP 6
+PNPVP
Sbjct: 254 QPNPVP 259
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 1 EPNPVPNFI 9
E NPV N+I
Sbjct: 569 EQNPVENYI 577
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2077 PRPAPNY 2083
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 EPNPVPNF 8
EPNP NF
Sbjct: 150 EPNPRLNF 157
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 EPNPVPNF 8
EPNP NF
Sbjct: 123 EPNPRLNF 130
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2076 PRPAPNY 2082
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 1 EPNPVPNF 8
EPNP NF
Sbjct: 132 EPNPRLNF 139
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 499 EPSPIP 504
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 EPNPVP 6
EP P+P
Sbjct: 501 EPTPIP 506
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2073 PAPAPNY 2079
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 4 PVPNFIH 10
P P FIH
Sbjct: 282 PHPYFIH 288
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2073 PAPAPNY 2079
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2076 PKPPPNY 2082
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2076 PKPPPNY 2082
>sp|GLYC_SABVB|PRE-GLYCOPROTEIN polyprotein GP complex|Sabia mammarenavirus (isolate
Query: 5 VPNFIH 10
VPN IH
Sbjct: 11 VPNIIH 16
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 5 VPNFIH 10
+PNF H
Sbjct: 172 LPNFYH 177
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 PNPVPN 7
PN VPN
Sbjct: 33 PNRVPN 38
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2077 PVPAPNY 2083
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 2 PNPVPNFIH 10
P PV IH
Sbjct: 514 PTPVGEVIH 522
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 NPVPNFI 9
NPV N+I
Sbjct: 575 NPVENYI 581
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2072 PLPAPNY 2078
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2072 PLPAPNY 2078
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2072 PLPAPNY 2078
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 3 NPVPNF 8
NP+P F
Sbjct: 406 NPIPMF 411
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2076 PIPAPNY 2082
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 PNPVPNF 8
P P PN+
Sbjct: 2072 PIPAPNY 2078
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 PNPVP 6
PNP+P
Sbjct: 121 PNPLP 125
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 EPNPVP 6
EP+P+P
Sbjct: 272 EPSPMP 277
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 EPNPVP 6
EP+P P
Sbjct: 272 EPSPTP 277
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 NPVPNFI 9
NPV N+I
Sbjct: 568 NPVENYI 574
>sp|PHOSP_PI1HD|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 PNPVP 6
PNP+P
Sbjct: 121 PNPLP 125
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 4 PVPNFIH 10
P P FIH
Sbjct: 341 PNPAFIH 347
230|Sequence|1146|1155|PNFIHCRSYL
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PNFIHCRSYL 10
P +IH R YL
Sbjct: 1650 PEYIHPRKYL 1659
>sp|A49_VARV|PROTEIN A49|Variola virus
Query: 2 NFIHCRSYL 10
NFI CRS L
Sbjct: 49 NFIMCRSNL 57
>sp|A49_VAR67|PROTEIN A49|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 NFIHCRSYL 10
NFI CRS L
Sbjct: 49 NFIMCRSNL 57
>sp|A49_VACCC|PROTEIN A49|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 NFIHCRSYL 10
NFI CRS L
Sbjct: 49 NFIMCRSNL 57
>sp|A49_VACCA|PROTEIN A49|Vaccinia virus (strain Ankara) (VACV)
Query: 2 NFIHCRSYL 10
NFI CRS L
Sbjct: 49 NFIMCRSNL 57
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PNFIHCRSYL 10
P +IH R YL
Sbjct: 1650 PAYIHPRKYL 1659
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PNFIHCRSYL 10
P +IH R YL
Sbjct: 1650 PAYIHPRKYL 1659
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 1 PNFIHCRSYL 10
P +IH R YL
Sbjct: 1650 PAYIHPRKYL 1659
>sp|NCAP_PIARV|NUCLEOPROTEIN mammarenavirus (PICV) (Pichind mammarenavirus)
Query: 2 NFIHCRSY 9
N+IHC +
Sbjct: 400 NYIHCYRF 407
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 1 PNFIHCR 7
PN ++CR
Sbjct: 328 PNTVYCR 334
>sp|CVC2_HHV7J|CAPSID vertex component 2|Human herpesvirus 7 (strain JI)
Query: 1 PNFIHCRSYL 10
P F+H + YL
Sbjct: 351 PIFVHQQQYL 360
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 2 NFIHCRSY 9
NFI RSY
Sbjct: 635 NFISNRSY 642
>sp|CVC2_HCMVM|CAPSID vertex component 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNFIHCRSYL 10
P F+H + YL
Sbjct: 415 PVFVHEQQYL 424
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 NFIHCRSYL 10
NFI SYL
Sbjct: 1949 NFISTESYL 1957
>sp|CVC2_HCMVA|CAPSID vertex component 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PNFIHCRSYL 10
P F+H + YL
Sbjct: 421 PVFVHEQQYL 430
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 NFIHCRSYL 10
NFI SYL
Sbjct: 1949 NFISTESYL 1957
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 NFIHCRSYL 10
NFI SYL
Sbjct: 1949 NFISTESYL 1957
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 NFIHC 6
N++HC
Sbjct: 400 NYVHC 404
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 2 NFIHCRS 8
NF CRS
Sbjct: 323 NFFECRS 329
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 2 NFIHCRS 8
NF CRS
Sbjct: 320 NFFECRS 326
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 2 NFIHCRS 8
NF CRS
Sbjct: 320 NFFECRS 326
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 2 NFIHCRS 8
NF CRS
Sbjct: 323 NFFECRS 329
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 PNFIHCRS 8
P FIH R+
Sbjct: 284 PYFIHFRA 291
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 3 FIHCR 7
F HCR
Sbjct: 68 FAHCR 72
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FIHCR 7
F HCR
Sbjct: 68 FAHCR 72
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 FIHCRSYL 10
IHC+ ++
Sbjct: 19 LIHCKQFV 26
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 PNFIHCR 7
PN + CR
Sbjct: 332 PNSVFCR 338
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 PNFIHCR 7
PN + CR
Sbjct: 332 PNSVFCR 338
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 NFIHCRSYL 10
+ IH SYL
Sbjct: 65 SIIHVNSYL 73
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 NFIHCRSYL 10
+ IH SYL
Sbjct: 65 SIIHVNSYL 73
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 NFIHCRSYL 10
+ IH SYL
Sbjct: 65 SIIHVNSYL 73
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 NFIHCRSYL 10
+ IH SYL
Sbjct: 65 SIIHVNSYL 73
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 2 NFIHCRSYL 10
+ IH SYL
Sbjct: 65 SIIHVNSYL 73
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PNFIHCRS 8
P+F+ C S
Sbjct: 489 PSFVKCTS 496
231|Sequence|1151|1160|CRSYLDMLKV
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 CRSYLD 6
CR+YLD
Sbjct: 1471 CRAYLD 1476
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CRSYLD 6
CR+YLD
Sbjct: 1471 CRAYLD 1476
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 CRSYLDMLKV 10
CR LD LK+
Sbjct: 573 CRMKLDKLKI 582
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CRSYLDML 8
CR+Y+++L
Sbjct: 523 CRTYIEIL 530
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 CRSYLDML 8
CR+Y+++L
Sbjct: 239 CRTYIEIL 246
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 CRSYLDMLKV 10
CR LD LK+
Sbjct: 574 CRLKLDKLKI 583
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 CRSYLDMLKV 10
CR LD LK+
Sbjct: 573 CRLKLDKLKI 582
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 CRSYLDMLK 9
C Y+D+LK
Sbjct: 287 CAEYIDLLK 295
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 CRSYLDMLK 9
C Y+D+LK
Sbjct: 287 CAEYIDLLK 295
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 CRSYLDMLK 9
C Y+D+LK
Sbjct: 287 CAEYIDLLK 295
>sp|NSP1B_ROTGA|NON-STRUCTURAL protein 1, peptide 2|Rotavirus B (isolate
Query: 3 SYLDMLK 9
SY DMLK
Sbjct: 214 SYTDMLK 220
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 RSYLDM 7
R+YLDM
Sbjct: 354 RTYLDM 359
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 2 RSYLDM 7
R+YLDM
Sbjct: 354 RTYLDM 359
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 2 RSYLDM 7
R+YLDM
Sbjct: 354 RTYLDM 359
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 SYLDMLK 9
SYLD+L+
Sbjct: 1172 SYLDLLR 1178
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 SYLDMLK 9
SYLD+L+
Sbjct: 1163 SYLDLLR 1169
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 982 CRTFLDSI 989
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRTFLDSI 995
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 4 YLDMLKV 10
YLD+LKV
Sbjct: 952 YLDILKV 958
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 4 YLDMLKV 10
YLD+LKV
Sbjct: 952 YLDILKV 958
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 4 YLDMLKV 10
YLD+LKV
Sbjct: 952 YLDILKV 958
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRAFLDSI 995
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 CRSYLDML 8
CR++LD +
Sbjct: 988 CRAFLDSI 995
>sp|GLRX1_VARV|GLUTAREDOXIN-1 virus
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|GLRX1_VAR67|GLUTAREDOXIN-1 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|GLRX1_CWPXG|GLUTAREDOXIN-1 virus (strain GRI-90 /
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|PG055_VACCC|PROTEIN OPG055|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CRSYLDMLK 9
C SY D +K
Sbjct: 268 CNSYADTIK 276
>sp|GLRX1_CWPXB|GLUTAREDOXIN-1 virus (strain Brighton Red)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|PG055_MONPV|PROTEIN OPG055|Monkeypox virus (MPXV)
Query: 1 CRSYLDMLK 9
C SY D +K
Sbjct: 268 CNSYADTIK 276
>sp|GLRX1_MONPV|GLUTAREDOXIN-1 virus (MPXV)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|NCAP_PI3H4|NUCLEOPROTEIN parainfluenza 3 virus (strain
Query: 2 RSYLDM 7
RSYLD+
Sbjct: 353 RSYLDI 358
>sp|GLRX1_VACCT|GLUTAREDOXIN-1 virus (strain Tian Tan)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|GLRX1_VACCP|GLUTAREDOXIN-1 virus (strain L-IVP) (VACV)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|GLRX1_VACCC|GLUTAREDOXIN-1 virus (strain Copenhagen) (VACV)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|GLRX1_VACCA|GLUTAREDOXIN-1 virus (strain Ankara) (VACV)
Query: 1 CRSYLDML 8
CR+ LD+L
Sbjct: 26 CRNALDIL 33
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 677 CKQYLNLYPV 686
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 677 CKQYLNLYPV 686
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 677 CKQYLNLYPV 686
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 677 CKQYLNLYPV 686
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 667 CKQYLNLYPV 676
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 667 CKQYLNLYPV 676
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 667 CKQYLNLYPV 676
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 667 CKQYLNLYPV 676
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 667 CKQYLNLYPV 676
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 678 CKQYLNLYPV 687
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 678 CKQYLNLYPV 687
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 678 CKQYLNLYPV 687
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 678 CKQYLNLYPV 687
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 CRSYLDMLKV 10
C+ YL++ V
Sbjct: 678 CKQYLNLYPV 687
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 SYLDMLKV 10
+Y DMLK
Sbjct: 268 AYFDMLKT 275
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 SYLDMLKV 10
+Y DMLK
Sbjct: 268 AYFDMLKT 275
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 SYLDMLKV 10
+Y DMLK
Sbjct: 268 AYFDMLKT 275
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 3 SYLDMLKV 10
+Y DMLK
Sbjct: 268 AYFDMLKT 275
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 1 CRSYLD 6
CR YLD
Sbjct: 347 CRCYLD 352
>sp|PG165_MONPV|PROTEIN OPG165|Monkeypox virus (MPXV)
Query: 1 CRSYLDM 7
CR Y+D+
Sbjct: 26 CRYYIDV 32
232|Sequence|1156|1165|DMLKVAVFRY
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 1 DMLKVAVF 8
D+LK AVF
Sbjct: 405 DLLKAAVF 412
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 MLKVAVFR 9
+LK AVFR
Sbjct: 1197 LLKPAVFR 1204
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 4 KVAVFRY 10
K+A FRY
Sbjct: 924 KIAQFRY 930
>sp|VU25_HHV6U|PROTEIN U25|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DMLKVAVFRY 10
D LK+ RY
Sbjct: 244 DFLKIGCLRY 253
>sp|VU25_HHV6Z|PROTEIN U25|Human herpesvirus 6B (strain Z29)
Query: 1 DMLKVAVFRY 10
D LK+ RY
Sbjct: 244 DFLKIGCLRY 253
>sp|VU25_HHV6H|PROTEIN U25|Human herpesvirus 6B (HHV-6 variant
Query: 1 DMLKVAVFRY 10
D LK+ RY
Sbjct: 244 DFLKIGCLRY 253
>sp|U17_HHV6G|PROTEIN U17|Human herpesvirus 6A (strain GS)
Query: 3 LKVAVFR 9
+K+AVFR
Sbjct: 24 IKIAVFR 30
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 4 KVAVFR 9
K+AVFR
Sbjct: 924 KIAVFR 929
>sp|U16_HHV6G|PROTEIN U17/U16|Human herpesvirus 6A (strain GS)
Query: 3 LKVAVFR 9
+K+AVFR
Sbjct: 24 IKIAVFR 30
>sp|U17_HHV6U|PROTEIN U17|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LKVAVFR 9
+K+AVFR
Sbjct: 24 IKIAVFR 30
>sp|U16_HHV6U|PROTEIN U17/U16|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LKVAVFR 9
+K+AVFR
Sbjct: 24 IKIAVFR 30
>sp|U17_HHV6Z|PROTEIN U17|Human herpesvirus 6B (strain Z29)
Query: 3 LKVAVFR 9
+K+AVFR
Sbjct: 24 IKIAVFR 30
233|Sequence|1161|1170|AVFRYLFWLV
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 FRYLFWLV 10
FR+ FW++
Sbjct: 3134 FRHFFWVL 3141
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 FRYLFWLV 10
FR+ FW++
Sbjct: 3134 FRHFFWVL 3141
>sp|IL18B_MONPV|INTERLEUKIN-18-BINDING protein|Monkeypox virus (MPXV)
Query: 3 FRYLFWL 9
F Y++WL
Sbjct: 49 FSYMYWL 55
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 AVFRYLFWL 9
+VF YLF L
Sbjct: 1344 SVFEYLFRL 1352
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 YLFWL 9
YLFWL
Sbjct: 132 YLFWL 136
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 YLFWL 9
YLFWL
Sbjct: 132 YLFWL 136
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 YLFWL 9
YLFWL
Sbjct: 132 YLFWL 136
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 4 RYLFWL 9
R+L+WL
Sbjct: 845 RFLWWL 850
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 YLFW 8
YLFW
Sbjct: 1994 YLFW 1997
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 5 YLFWLV 10
Y+FW V
Sbjct: 474 YMFWEV 479
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 5 YLFW 8
YLFW
Sbjct: 7024 YLFW 7027
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 5 YLFW 8
YLFW
Sbjct: 7111 YLFW 7114
234|Sequence|1166|1175|LFWLVLVVVF
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LFWLVLVVVF 10
FW +LV+ F
Sbjct: 766 FFWGLLVICF 775
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 WLVLVVV 9
WL LVVV
Sbjct: 455 WLFLVVV 461
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 WLVLVVV 9
W+VL+V+
Sbjct: 1106 WIVLIVL 1112
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 WLVLVVV 9
W+VL+V+
Sbjct: 1106 WIVLIVL 1112
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 WLVLVVV 9
W+VL+V+
Sbjct: 1105 WIVLIVL 1111
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 3 WLVLV 7
WLVLV
Sbjct: 409 WLVLV 413
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 3 WLVLV 7
WLVLV
Sbjct: 394 WLVLV 398
>sp|LEAD_ADE02|I-LEADER protein|Human adenovirus C serotype 2
Query: 1 LFWLVLVVVF 10
L W V +VVF
Sbjct: 72 LAWRVWLVVF 81
235|Sequence|1171|1180|LVVVFVTGAT
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 4 VFVTGAT 10
VF++GAT
Sbjct: 428 VFISGAT 434
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 VVVFVTGAT 10
V VF+ G+T
Sbjct: 426 VAVFIHGST 434
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 VVVFVTGAT 10
V +FV G+T
Sbjct: 427 VAIFVHGST 435
236|Sequence|1176|1185|VTGATRISIF
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 VTGATRIS 8
VTGATRI+
Sbjct: 118 VTGATRIA 125
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 1 VTGATRIS 8
VTGATRI+
Sbjct: 117 VTGATRIA 124
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 VTGATRISIF 10
VT AT+ SI+
Sbjct: 189 VTPATKTSIY 198
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 VTGATRISIF 10
VT AT+ SI+
Sbjct: 189 VTPATKTSIY 198
>sp|B8_HHV6Z|PROTEIN B8|Human herpesvirus 6B (strain Z29)
Query: 3 GATRISIF 10
GAT +S+F
Sbjct: 77 GATAVSVF 84
Query: 3 GATRISIF 10
GAT +S+F
Sbjct: 147 GATAVSVF 154
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 588 MTGDTPINIF 597
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 588 MTGDTPINIF 597
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 587 MTGDTPINIF 596
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 589 MTGDTPINIF 598
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 586 MTGDTPINIF 595
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 588 MTGDTPINIF 597
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 589 MTGDTPINIF 598
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 586 MTGDTPINIF 595
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 588 MTGDTPINIF 597
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 587 MTGDTPINIF 596
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 588 MTGDTPINIF 597
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTGATRISIF 10
+TG T I+IF
Sbjct: 588 MTGDTPINIF 597
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 VTGATRIS 8
+TG+TR++
Sbjct: 111 ITGSTRVA 118
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 VTGATRIS 8
+TG+TR++
Sbjct: 111 ITGSTRVA 118
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 VTGATRISI 9
+ G TR+S+
Sbjct: 296 IQGTTRVSL 304
237|Sequence|1181|1190|RISIFGLGYL
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 2 ISIFGLGYL 10
IS+F LGYL
Sbjct: 755 ISLFYLGYL 763
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 5 FGLGYL 10
FGLGYL
Sbjct: 659 FGLGYL 664
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 5 FGLGYL 10
FGLGYL
Sbjct: 659 FGLGYL 664
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 IFGLGYL 10
+FG GYL
Sbjct: 1979 LFGAGYL 1985
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 IFGLGYL 10
+FG GYL
Sbjct: 1979 LFGAGYL 1985
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 2 ISIFGL 7
ISIFGL
Sbjct: 4 ISIFGL 9
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 RISIFGLGYL 10
R IFG GY+
Sbjct: 636 RYFIFGGGYV 645
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 RISIFGLGYL 10
R IFG GY+
Sbjct: 636 RYFIFGGGYV 645
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 5 FGLGYL 10
FG+GY+
Sbjct: 178 FGVGYM 183
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 5 FGLGYL 10
FGLG+L
Sbjct: 107 FGLGHL 112
>sp|ITP_EBVB9|INNER tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 FGLGYL 10
FGLG+L
Sbjct: 107 FGLGHL 112
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 FGLGYL 10
FGLG+L
Sbjct: 107 FGLGHL 112
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 IFGLGYL 10
+FG GYL
Sbjct: 1978 MFGSGYL 1984
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 IFGLGYL 10
+FG GYL
Sbjct: 1978 MFGSGYL 1984
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 4 IFGLGY 9
+FG+GY
Sbjct: 208 LFGVGY 213
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 IFGLGY 9
++GLGY
Sbjct: 258 LYGLGY 263
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 4 IFGLGY 9
++GLGY
Sbjct: 258 LYGLGY 263
238|Sequence|1186|1195|GLGYLLACFY
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 GLGYLLACFY 10
G GY+L C +
Sbjct: 554 GCGYILTCIF 563
>sp|PG121_MONPV|MRNA-DECAPPING protein OPG121|Monkeypox virus (MPXV)
Query: 2 LGYLLACF 9
+GY +ACF
Sbjct: 159 IGYCMACF 166
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 LGYLLACFY 10
+GY+L+C++
Sbjct: 3851 IGYILSCYW 3859
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 LGYLLACFY 10
+GY+L+C++
Sbjct: 3851 IGYILSCYW 3859
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 LGYLLACFY 10
+GY+L+C++
Sbjct: 3821 IGYILSCYW 3829
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 LGYLLACFY 10
+GY+L+C++
Sbjct: 3801 IGYILSCYW 3809
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 LGYLLACFY 10
+GY+L+C++
Sbjct: 3821 IGYILSCYW 3829
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 LGYLLACFY 10
+GY+L+C++
Sbjct: 3801 IGYILSCYW 3809
>sp|PG121_VAR67|MRNA-DECAPPING protein OPG121|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LGYLLACF 9
+GY ++CF
Sbjct: 159 IGYCMSCF 166
>sp|D9_VARV|MRNA-DECAPPING protein D9|Variola virus
Query: 2 LGYLLACF 9
+GY ++CF
Sbjct: 159 IGYCMSCF 166
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 GLGYLLA 7
GLG+LLA
Sbjct: 1280 GLGFLLA 1286
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 GLGYLLACF 9
G G +LAC+
Sbjct: 1810 GAGAMLACY 1818
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LGYLLACFY 10
+GY+++C++
Sbjct: 3763 IGYIISCYW 3771
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LGYLLACFY 10
+GY+++C++
Sbjct: 3763 IGYIISCYW 3771
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 GLGYLLACF 9
G+G LLA F
Sbjct: 1280 GIGLLLAAF 1288
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LGYLLACFY 10
LGY C++
Sbjct: 3786 LGYFCTCYF 3794
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LGYLLACFY 10
LGY C++
Sbjct: 3786 LGYFCTCYF 3794
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LGYLLAC 8
LGY+ AC
Sbjct: 15 LGYVYAC 21
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LGYLLAC 8
LGY+ AC
Sbjct: 15 LGYVYAC 21
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 585 MGYVIGCY 592
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 585 MGYVIGCY 592
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 585 MGYVIGCY 592
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 LGYLLACFY 10
L YLL C Y
Sbjct: 462 LPYLLCCNY 470
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LGYLLACFY 10
L YLL C Y
Sbjct: 462 LPYLLCCNY 470
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 LGYLLACFY 10
L YLL C Y
Sbjct: 462 LPYLLCCNY 470
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 585 MGYVIGCY 592
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 596 MGYVIGCY 603
>sp|POL_HTLV2|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 2
Query: 3 GYLLAC 8
G+LLAC
Sbjct: 935 GHLLAC 940
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GLGYLLAC 8
G G LLAC
Sbjct: 167 GCGPLLAC 174
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 1 GLGYLLAC 8
G G LLAC
Sbjct: 137 GCGPLLAC 144
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 598 MGYIIGCW 605
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 2 LGYLLAC 8
LG+LL C
Sbjct: 7 LGFLLMC 13
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 LGYLLAC 8
LG+LL C
Sbjct: 7 LGFLLMC 13
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 LGYLLACFY 10
LGY C++
Sbjct: 3763 LGYCCCCYF 3771
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 LGYLLACFY 10
LGY C++
Sbjct: 3763 LGYCCCCYF 3771
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 LGYLLAC 8
LG+LL C
Sbjct: 7 LGFLLMC 13
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 LGYLLACFY 10
LG++ C++
Sbjct: 3772 LGFMCTCYF 3780
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LGYLLACFY 10
LG++ C++
Sbjct: 3772 LGFMCTCYF 3780
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 436 GFLAALFY 443
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 436 GFLAALFY 443
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 436 GFLAALFY 443
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 585 MGYVIGCW 592
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 436 GFLAALFY 443
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 436 GFLAALFY 443
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 LGYLLACF 9
+GY++ C+
Sbjct: 596 MGYVIGCW 603
>sp|Y113_ADE07|UNCHARACTERIZED 11.3 kDa early protein|Human adenovirus B serotype 7
Query: 3 GYLLAC 8
G+L+AC
Sbjct: 31 GWLIAC 36
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 GLGYLL 6
GLG+LL
Sbjct: 421 GLGFLL 426
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 GLGYLL 6
GLG+LL
Sbjct: 436 GLGFLL 441
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 437 GFLAALFY 444
>sp|POLG_HCVHK|GENOME polyprotein|Hepatitis C virus (isolate HCV-KF)
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 437 GFLAALFY 444
>sp|POLG_HCVJ2|GENOME polyprotein|Hepatitis C virus (isolate HC-J2)
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 436 GFLAALFY 443
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 GLGYLLACFY 10
G G LL FY
Sbjct: 175 GCGTLLRAFY 184
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 GLGYLLACF 9
G+G+ L C
Sbjct: 985 GVGFTLTCL 993
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 GLGYLLACF 9
G+G+ L C
Sbjct: 986 GVGFTLTCL 994
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 YLLACF 9
Y+L CF
Sbjct: 448 YILKCF 453
>sp|MC132_MCV1|PROTEIN MC132|Molluscum contagiosum virus subtype 1
Query: 1 GLGYLLAC 8
GLG+ L C
Sbjct: 93 GLGHFLFC 100
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 GYLLACFY 10
G+L A FY
Sbjct: 435 GFLSALFY 442
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 GLGYLLACF 9
G+G+ L C
Sbjct: 986 GVGFTLTCL 994
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 GLGYLLAC 8
G+G+ L C
Sbjct: 986 GVGFTLTC 993
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 1 GLGYLLAC 8
G+G+ L C
Sbjct: 991 GVGFTLTC 998
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 GLGYLLAC 8
G+G+ L C
Sbjct: 988 GVGFTLTC 995
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 GLGYLLAC 8
G+G+ L C
Sbjct: 989 GVGFTLVC 996
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 1 GLGYLLAC 8
G+G+ L C
Sbjct: 989 GVGFTLVC 996
239|Sequence|1191|1200|LACFYLLLFG
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LACFYLLLFG 10
+ CF LLL G
Sbjct: 837 IMCFLLLLTG 846
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LACFYLL-LFG 10
+AC YL+ +FG
Sbjct: 7 IACLYLISIFG 17
>sp|US28_HCMVT|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain Towne)
Query: 2 ACFYLLLFG 10
ACFY+ +F
Sbjct: 109 ACFYVAMFA 117
>sp|US28_HCMVA|G-PROTEIN coupled receptor homolog US28|Human cytomegalovirus (strain AD169)
Query: 2 ACFYLLLFG 10
ACFY+ +F
Sbjct: 109 ACFYVAMFA 117
>sp|ENV_HTL3P|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 LACFYLLL 8
L CFY L
Sbjct: 10 LICFYTLF 17
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 4 FYLLLF 9
F+LLLF
Sbjct: 5 FFLLLF 10
>sp|CAPSD_TTVV9|CAPSID protein|Torque teno virus (isolate Japanese
Query: 2 ACFYLLLFG 10
A YL LFG
Sbjct: 434 APLYLALFG 442
>sp|PG191_VACCC|PROTEIN OPG191|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 CFYLLL 8
C+YLL+
Sbjct: 161 CYYLLM 166
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 1 LACFYLLLF 9
+ C+++L+F
Sbjct: 7 ILCYFILIF 15
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 1 LACFYLLLF 9
+ C+++L+F
Sbjct: 7 ILCYFILIF 15
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 LACFYLLL 8
L C+YL+L
Sbjct: 247 LNCYYLVL 254
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LACFYLLLF 9
+ C+++L+F
Sbjct: 7 ILCYFILIF 15
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LACFYLLLF 9
+ C+++L+F
Sbjct: 7 ILCYFILIF 15
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 1 LACFYLLLF 9
+ C+++L+F
Sbjct: 7 ILCYFILIF 15
240|Sequence|1196|1205|LLLFGTALLQ
>sp|UL144_HCMVM|MEMBRANE glycoprotein UL144|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LLLFGTALLQ 10
L+ FG LLQ
Sbjct: 7 LICFGVILLQ 16
241|Sequence|1201|1210|TALLQRDTRA
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 TALLQRDTRA 10
TALL R TRA
Sbjct: 304 TALLLRSTRA 313
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 TALLQRDTRA 10
TALL R TRA
Sbjct: 304 TALLLRSTRA 313
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 TALLQRDTRA 10
TALL R TRA
Sbjct: 304 TALLLRSTRA 313
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 TALLQRDTRA 10
TALL R TRA
Sbjct: 304 TALLLRSTRA 313
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 1 TALLQRDTRA 10
TALL R TRA
Sbjct: 304 TALLLRSTRA 313
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 TALLQRDTR 9
+ L+QRDTR
Sbjct: 1297 SELVQRDTR 1305
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 2 ALLQRDTRA 10
ALL R TRA
Sbjct: 305 ALLLRSTRA 313
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 ALLQRDTR 9
ALL RD R
Sbjct: 374 ALLDRDCR 381
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 ALLQRDTR 9
ALL RD R
Sbjct: 374 ALLDRDCR 381
242|Sequence|1206|1215|RDTRARLVLW
>sp|VE2_HPV53|REGULATORY protein E2|Human papillomavirus type 53
Query: 1 RDTRARLVLW 10
+D RA V+W
Sbjct: 125 KDNRAEYVVW 134
>sp|VE2_HPV30|REGULATORY protein E2|Human papillomavirus 30
Query: 1 RDTRARLVLW 10
+D R V+W
Sbjct: 125 KDNRTEYVVW 134
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 4 RARLVLW 10
R+RL LW
Sbjct: 70 RSRLNLW 76
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 1 RDTRARLVLW 10
RDT + V W
Sbjct: 113 RDTHPQAVQW 122
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 DTRARLVLW 10
D R +VLW
Sbjct: 733 DARVCVVLW 741
>sp|HBSAG_HBVD6|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 RDTRARLVLW 10
RDT + V W
Sbjct: 102 RDTHPQAVQW 111
243|Sequence|1211|1220|RLVLWDCLIL
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 3 VLWDCL 8
VLWDC+
Sbjct: 426 VLWDCV 431
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 VLWDCLI 9
V+W CLI
Sbjct: 1610 VMWKCLI 1616
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 VLWDC 7
+LWDC
Sbjct: 752 ILWDC 756
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 VLWDCLI 9
V+W CLI
Sbjct: 1610 VMWKCLI 1616
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RLVLWDCLIL 10
RL+ W C ++
Sbjct: 211 RLIYWACTLM 220
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RLVLWDCLIL 10
RL+ W C ++
Sbjct: 211 RLIYWACTLM 220
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 2 LVLWDCL 8
L LW+CL
Sbjct: 1346 LALWECL 1352
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 2 LVLWDCLIL 10
++LW CL+L
Sbjct: 17 ILLWCCLLL 25
>sp|IR12_HCMVA|UNCHARACTERIZED protein IRL12|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 WDCL 8
WDCL
Sbjct: 215 WDCL 218
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 VLWDCLI 9
++W CLI
Sbjct: 1610 MMWKCLI 1616
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1608 MWKCLI 1613
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1609 MWKCLI 1614
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1615 MWKCLI 1620
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1605 MWKCLI 1610
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
Query: 4 LWDCLIL 10
LW C +L
Sbjct: 793 LWPCFLL 799
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 VLWDCL 8
V+W CL
Sbjct: 1610 VMWKCL 1615
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 VLWDCL 8
V+W CL
Sbjct: 1610 VMWKCL 1615
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 VLWDCL 8
V+W CL
Sbjct: 1610 VMWKCL 1615
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1612 MWKCLI 1617
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 3 VLWDCL 8
V+W CL
Sbjct: 1611 VMWKCL 1616
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 LWDCLI 9
+W CLI
Sbjct: 1607 MWKCLI 1612
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 3 VLWDC 7
++WDC
Sbjct: 735 LVWDC 739
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 VLWDC 7
++WDC
Sbjct: 735 LVWDC 739
>sp|BEL2_SFV1|PROTEIN Bel-2|Simian foamy virus type 1
Query: 4 LWDCL 8
LW CL
Sbjct: 92 LWQCL 96
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 4 LWDCLI 9
+W CL+
Sbjct: 1613 MWKCLV 1618
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 5 WDCLI 9
WDC++
Sbjct: 210 WDCIM 214
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 6 DCLIL 10
DCLIL
Sbjct: 143 DCLIL 147
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 LWDCLI 9
+W C+I
Sbjct: 1608 MWKCMI 1613
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 5 WDCLI 9
WDC++
Sbjct: 209 WDCIM 213
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RLVLWDCLIL 10
R+V W+ +I+
Sbjct: 1763 RIVNWEVIIM 1772
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RLVLWDCLIL 10
R+V W+ +I+
Sbjct: 1763 RIVNWEVIIM 1772
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RLVLWDCLIL 10
R+V W+ +I+
Sbjct: 1763 RIVNWEVIIM 1772
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RLVLWDCLIL 10
R+V W+ +I+
Sbjct: 1763 RIVNWEVIIM 1772
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 4 LWDCLI 9
+W CL+
Sbjct: 1611 MWKCLL 1616
244|Sequence|1216|1225|DCLILYNVTV
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 CLILYNVTV 10
C +L+NVTV
Sbjct: 402 CCLLHNVTV 410
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CLILYNVTV 10
C +L+NVTV
Sbjct: 402 CCLLHNVTV 410
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CLILYNVTV 10
C +L+NVTV
Sbjct: 402 CCLLHNVTV 410
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 DCLILY 6
DCLIL+
Sbjct: 143 DCLILF 148
>sp|VE1_HPV52|REPLICATION protein E1|Human papillomavirus 52
Query: 1 DCLILY 6
+CL+LY
Sbjct: 467 NCLVLY 472
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 DCLILYNVT 9
DCL L N+T
Sbjct: 1944 DCLYLKNLT 1952
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 DCLILYNVT 9
DCL L N+T
Sbjct: 1914 DCLYLKNLT 1922
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 DCLILYNVT 9
DCL L N+T
Sbjct: 1894 DCLYLKNLT 1902
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 DCLILYNVT 9
DCL L N+T
Sbjct: 1894 DCLYLKNLT 1902
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 DCLILYNVT 9
DCL L N+T
Sbjct: 1914 DCLYLKNLT 1922
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 DCLILYNVT 9
DCL L N+T
Sbjct: 1944 DCLYLKNLT 1952
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 1 DCLILY 6
+CL+LY
Sbjct: 453 NCLVLY 458
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 4 ILYNVT 9
+LYN+T
Sbjct: 1248 VLYNIT 1253
>sp|PG141_VAR67|VIRION membrane protein OPG141|Variola virus (isolate
Query: 2 CLILYNVTV 10
C++L+N T+
Sbjct: 16 CVLLFNFTI 24
>sp|PG141_VACCC|VIRION membrane protein OPG141|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 CLILYNVTV 10
C++L+N T+
Sbjct: 16 CVLLFNFTI 24
>sp|PG077_VACCT|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Tian Tan)
Query: 1 DCLILYNVTV 10
+CL + N+T+
Sbjct: 298 ECLTVPNITI 307
>sp|PG077_VACCC|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 DCLILYNVTV 10
+CL + N+T+
Sbjct: 298 ECLTVPNITI 307
>sp|PG077_VAR67|TELOMERE-BINDING protein OPG077|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DCLILYNVTV 10
+CL + N+T+
Sbjct: 298 ECLTVPNITI 307
>sp|PG077_MONPZ|TELOMERE-BINDING protein OPG077|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 1 DCLILYNVTV 10
+CL + N+T+
Sbjct: 298 ECLTVPNITI 307
>sp|PG077_MONPV|TELOMERE-BINDING protein OPG077|Monkeypox virus (MPXV)
Query: 1 DCLILYNVTV 10
+CL + N+T+
Sbjct: 298 ECLTVPNITI 307
>sp|PG141_MONPV|VIRION membrane protein OPG141|Monkeypox virus (MPXV)
Query: 2 CLILYNVTV 10
C++L+N T+
Sbjct: 16 CVLLFNFTI 24
>sp|PG077_VACCA|TELOMERE-BINDING protein OPG077|Vaccinia virus (strain Ankara) (VACV)
Query: 1 DCLILYNVTV 10
+CL + N+T+
Sbjct: 298 ECLTVPNITI 307
245|Sequence|1221|1230|YNVTVIISKN
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 NVTVIISKN 10
N+TV++ KN
Sbjct: 861 NLTVVVDKN 869
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 NVTVIISKN 10
N+TV++ KN
Sbjct: 861 NLTVVVDKN 869
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 NVTVIISKN 10
NVT IIS +
Sbjct: 549 NVTFIISSD 557
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 NVTVIISKN 10
NVT IIS +
Sbjct: 549 NVTFIISSD 557
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 NVTVIISKN 10
NVT IIS +
Sbjct: 549 NVTFIISSD 557
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 TVIISKN 10
TV+IS+N
Sbjct: 1057 TVVISEN 1063
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 TVIISKN 10
TV+IS+N
Sbjct: 1057 TVVISEN 1063
246|Sequence|1226|1235|IISKNMLSLL
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 1 IISKNMLSLL 10
I+S+N+LS L
Sbjct: 346 IVSRNVLSCL 355
>sp|PORTL_HHV6Z|PORTAL protein|Human herpesvirus 6B (strain Z29)
Query: 1 IISKNMLSLL 10
++SKN+LS L
Sbjct: 51 MLSKNLLSYL 60
>sp|PORTL_HHV6U|PORTAL protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IISKNMLSLL 10
++SKN+LS L
Sbjct: 51 MLSKNLLSYL 60
247|Sequence|1231|1240|MLSLLACVFV
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 MLSLLACV 8
+LSLL CV
Sbjct: 736 LLSLLCCV 743
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 LLACVF 9
LLAC+F
Sbjct: 876 LLACLF 881
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 MLSLLACVFV 10
M +LLAC+++
Sbjct: 2352 MYNLLACLWL 2361
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 MLSLLACV 8
+LSL+ C+
Sbjct: 736 LLSLICCI 743
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 MLSLLACV 8
+LSL+ C+
Sbjct: 736 LLSLICCI 743
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 MLSLLACV 8
+LSL+ C+
Sbjct: 736 LLSLICCI 743
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LSLLACVF 9
LSL ACVF
Sbjct: 8 LSLGACVF 15
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LSLLACVF 9
LSL ACVF
Sbjct: 8 LSLGACVF 15
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LSLLACVF 9
LSL ACVF
Sbjct: 8 LSLGACVF 15
248|Sequence|1236|1245|ACVFVEQMQT
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 CVFVEQMQ 9
CVF EQM+
Sbjct: 742 CVFYEQMK 749
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 1 ACVFVEQMQ 9
AC+FVE ++
Sbjct: 939 ACLFVEPVK 947
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 1 ACVFVEQMQ 9
AC+FVE ++
Sbjct: 939 ACLFVEPVK 947
>sp|US03_VZVD|SERINE/THREONINE-PROTEIN kinase US3 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 CVFVEQM 8
C F++QM
Sbjct: 31 CGFIQQM 37
249|Sequence|1241|1250|EQMQTGFCWV
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 2 QMQTGFCW 9
M TG CW
Sbjct: 1324 HMSTGECW 1331
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 3 MQTGFCW 9
M TG CW
Sbjct: 1334 MSTGECW 1340
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 3 MQTGFCW 9
M TG CW
Sbjct: 1326 MSTGECW 1332
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 1 EQMQTGF 7
EQ+Q GF
Sbjct: 565 EQLQMGF 571
Query: 3 MQTGF 7
MQTGF
Sbjct: 1008 MQTGF 1012
>sp|NCAP_I88A7|NUCLEOPROTEIN A virus (strain A/Wisconsin/3523/1988
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I88A5|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/17672/1988
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I82A7|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I82A4|NUCLEOPROTEIN A virus (strain A/Swine/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I81A4|NUCLEOPROTEIN A virus (strain A/Swine/Ontario/2/1981
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I80A2|NUCLEOPROTEIN A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I80A1|NUCLEOPROTEIN A virus (strain A/Duck/Australia/749/1980
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I79A5|NUCLEOPROTEIN A virus (strain A/Swine/Italy/2/1979
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I78A3|NUCLEOPROTEIN A virus (strain A/Mallard/New
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I77AC|NUCLEOPROTEIN A virus (strain A/Swine/Tennessee/24/1977
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I76AG|NUCLEOPROTEIN A virus (strain A/Swine/Italy/437/1976
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I76AF|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1976/1931
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I76A7|NUCLEOPROTEIN A virus (strain A/New
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I75A2|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I67A2|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I61A1|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I59A0|NUCLEOPROTEIN A virus (strain A/Chicken/Scotland/1959
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I57A7|NUCLEOPROTEIN A virus (strain A/Swine/Wisconsin/1/1957
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I56A3|NUCLEOPROTEIN A virus (strain A/Equine/Prague/1/1956
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I54A1|NUCLEOPROTEIN A virus (strain A/Swine/May/1954
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I42A0|NUCLEOPROTEIN A virus (strain A/Swine/Jamesburg/1942
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I30A0|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/15/1930
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I05A1|NUCLEOPROTEIN A virus (strain A/Goose/Guangxi/345/2005
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I03A1|NUCLEOPROTEIN A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I03A0|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A6|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A5|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A4|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A1|NUCLEOPROTEIN A virus (strain A/Guinea
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I01A3|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I01A2|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I49A2|NUCLEOPROTEIN A virus (strain A/Swine/41/1949
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I46A1|NUCLEOPROTEIN A virus (strain A/Swine/Iowa/1946
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I37A0|NUCLEOPROTEIN A virus (strain A/Swine/29/1937
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I35A2|NUCLEOPROTEIN A virus (strain A/Swine/Ohio/23/1935
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I27A0|NUCLEOPROTEIN A virus (strain A/Fowl
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I01A1|NUCLEOPROTEIN A virus (strain A/Chicken/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I97A1|NUCLEOPROTEIN A virus (strain A/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I96A0|NUCLEOPROTEIN A virus (strain A/Goose/Guangdong/1/1996
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I80A5|NUCLEOPROTEIN A virus (strain A/Teal/Iceland/29/1980
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I77A3|NUCLEOPROTEIN A virus (strain A/Duck/Bavaria/2/1977
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I02A7|NUCLEOPROTEIN A virus (strain A/Teal/China/2978.1/2002
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I01A0|NUCLEOPROTEIN A virus (strain A/Silky
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I00A0|NUCLEOPROTEIN A virus (strain A/Duck/Hong
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I85A4|NUCLEOPROTEIN A virus (strain A/Swine/Netherlands/12/1985
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I81A3|NUCLEOPROTEIN A virus (strain A/Turkey/Minnesota/1661/1981
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I81A0|NUCLEOPROTEIN A virus (strain A/Swine/Germany/2/1981
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I73A4|NUCLEOPROTEIN A virus (strain A/Equine/London/1416/1973
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|NCAP_I89A6|NUCLEOPROTEIN A virus (strain A/Swine/Italy/839/1989
Query: 1 EQMQTG 6
EQM+TG
Sbjct: 11 EQMETG 16
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 MQTGFC 8
++TGFC
Sbjct: 3 IRTGFC 8
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 3 MQTGFC 8
++TGFC
Sbjct: 3 IRTGFC 8
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EQMQ-----TGFC 8
EQ+Q TGFC
Sbjct: 54 EQIQEFSGETGFC 66
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 5 TGFCWV 10
TGF W+
Sbjct: 900 TGFVWL 905
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 5 TGFCWV 10
TGF W+
Sbjct: 900 TGFVWL 905
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 5 TGFCWV 10
TGF W+
Sbjct: 901 TGFTWL 906
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 QTGFC 8
+TGFC
Sbjct: 62 ETGFC 66
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 QTGFC 8
+TGFC
Sbjct: 62 ETGFC 66
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 2 QMQTGFCW 9
QM++G W
Sbjct: 176 QMRSGAAW 183
>sp|ICP22_HHV2|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (HHV-2) (Human
Query: 2 QMQTGFCW 9
QM++G W
Sbjct: 177 QMRSGAAW 184
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 EQMQTGFC 8
+ TGFC
Sbjct: 169 DDFMTGFC 176
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 1 EQMQTGFC 8
+ TGFC
Sbjct: 169 DDFMTGFC 176
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 1 EQMQTGFC 8
+ TGFC
Sbjct: 169 DDFMTGFC 176
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 1 EQMQTGFC 8
+ TGFC
Sbjct: 169 DDFMTGFC 176
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 1 EQMQTGFC 8
+ TGFC
Sbjct: 169 DDFMTGFC 176
250|Sequence|1246|1255|GFCWVIQLFS
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWANQLF 330
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 336 GICWANQLF 344
>sp|VL1_HPV10|MAJOR capsid protein L1|Human papillomavirus type 10
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 349 GICWANQLF 357
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 352 GICWANQLF 360
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 335 GICWFNQLF 343
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 336 GICWFNQLF 344
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 334 GICWFNQLF 342
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 364 GICWFNQLF 372
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 336 GICWFNQLF 344
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 320 GICWSNQLF 328
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 332 GICWENQLF 340
>sp|VL1_HPV1|MAJOR capsid protein L1|Human papillomavirus type 1 (Human
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 329 GICWRNQLF 337
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWNNQLF 330
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 320 GICWNNQLF 328
>sp|VL1_HPV51|MAJOR capsid protein L1|Human papillomavirus 51
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWNNQLF 330
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWHNQLF 330
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 320 GICWHNQLF 328
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWHNQLF 330
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 351 GICWHNQLF 359
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 321 GICWHNQLF 329
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 345 GICWHNQLF 353
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 318 GICWGNQLF 326
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 318 GICWGNQLF 326
>sp|VL1_HPV69|MAJOR capsid protein L1|Human papillomavirus 69
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 323 GICWGNQLF 331
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 331 GICWDNQLF 339
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 327 GICWGNQLF 335
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 356 GICWGNQLF 364
>sp|VL1_HPV55|MAJOR capsid protein L1|Human papillomavirus type 55
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 318 GICWGNQLF 326
>sp|VL1_HPV44|MAJOR capsid protein L1|Human papillomavirus 44
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 318 GICWGNQLF 326
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWGNQLF 330
>sp|VL1_HPV31|MAJOR capsid protein L1|Human papillomavirus 31
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 323 GICWGNQLF 331
>sp|VL1_HPV26|MAJOR capsid protein L1|Human papillomavirus type 26
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWGNQLF 330
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 322 GICWGNQLF 330
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 331 GICWDNQLF 339
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 322 GICWANQVF 330
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 348 GICWGNQLF 356
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 353 GICWGNQLF 361
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 383 GVCWHNQLF 391
>sp|VL1_HPV64|MAJOR capsid protein L1|Human papillomavirus type 64
Query: 1 GFCWVIQLF 9
G CW QLF
Sbjct: 7 GICWHNQLF 15
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 GFCWVIQLF 9
G CW +LF
Sbjct: 323 GICWFNELF 331
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 GFCWVIQLF 9
G CW +LF
Sbjct: 323 GICWFNELF 331
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 352 GICWGNQIF 360
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 GFCWVIQLF 9
G CW +LF
Sbjct: 327 GICWRNELF 335
>sp|VL1_HPV66|MAJOR capsid protein L1|Human papillomavirus 66
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 321 GICWGNQVF 329
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 316 GICWGNQVF 324
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 322 GICWGNQVF 330
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 322 GICWGNQVF 330
>sp|VL1_HPV30|MAJOR capsid protein L1|Human papillomavirus 30
Query: 1 GFCWVIQLF 9
G CW Q+F
Sbjct: 329 GICWGNQVF 337
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 1 GFCWVIQLF 9
G CW +LF
Sbjct: 327 GICWGNELF 335
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GFCWV 5
G CWV
Sbjct: 129 GVCWV 133
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 GFCWV 5
G CW+
Sbjct: 1967 GMCWI 1971
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 GFCWV 5
G CW+
Sbjct: 1967 GMCWI 1971
>sp|DR7_HHV6U|TRANSACTIVATOR protein DR7|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FCWVIQLF 9
F WV +LF
Sbjct: 43 FVWVKRLF 50
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 FCWVIQL 8
FCW+ ++
Sbjct: 2217 FCWMAEV 2223
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 FCWVIQL 8
FCW+ ++
Sbjct: 2213 FCWMAEV 2219
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 FCWVIQL 8
FCW+ ++
Sbjct: 2217 FCWMAEV 2223
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 GFCWVIQL 8
G C+++QL
Sbjct: 536 GHCYLLQL 543
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 GFCWVIQL 8
G C+++QL
Sbjct: 536 GHCYLLQL 543
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 GFCWVI 6
G+CW +
Sbjct: 769 GWCWTL 774
>sp|US21_HCMVM|MEMBRANE protein US21|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 GFCWVI------QLFS 10
FCW++ QLFS
Sbjct: 34 AFCWLVLPHRLEQLFS 49
>sp|US21_HCMVA|UNCHARACTERIZED protein HWLF2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GFCWVI------QLFS 10
FCW++ QLFS
Sbjct: 34 AFCWLVLPHRLEQLFS 49
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 GFCWVI 6
G CW +
Sbjct: 1080 GVCWTV 1085
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 GFCW 4
G+CW
Sbjct: 146 GWCW 149
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 GFCW 4
G+CW
Sbjct: 146 GWCW 149
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 GFCWVI 6
G CW +
Sbjct: 1076 GVCWTV 1081
251|Sequence|1251|1260|IQLFSLVCTV
>sp|GP_PUUMU|ENVELOPE glycoprotein|Puumala virus (strain Udmurtia/894CG/91)
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 86 FNLVCTV 92
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 992 FTLVCTV 998
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 992 FTLVCTV 998
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 998 FNLVCTV 1004
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 998 FNLVCTV 1004
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 998 FNLVCTV 1004
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 FSLVCTV 10
F+LVCTV
Sbjct: 998 FNLVCTV 1004
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 IQLFSLVC 8
+QL L+C
Sbjct: 258 VQLLQLIC 265
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 3 LFSLVCTV 10
LF++VC +
Sbjct: 78 LFNIVCVI 85
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 LFSLVCTV 10
LF++VC +
Sbjct: 78 LFNIVCVI 85
>sp|VL1_HPV5B|MAJOR capsid protein L1|Human papillomavirus type 5b
Query: 1 IQLFSLVCT 9
IQ+F + CT
Sbjct: 163 IQMFIVGCT 171
>sp|VL1_HPV47|MAJOR capsid protein L1|Human papillomavirus 47
Query: 1 IQLFSLVCT 9
IQ+F + CT
Sbjct: 154 IQMFIVGCT 162
>sp|VL1_HPV36|MAJOR capsid protein L1|Human papillomavirus 36
Query: 1 IQLFSLVCT 9
IQ+F + CT
Sbjct: 154 IQMFIVGCT 162
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 1 IQLFSLVCT 9
IQ+F + CT
Sbjct: 154 IQMFIVGCT 162
>sp|VL1_HPV08|MAJOR capsid protein L1|Human papillomavirus type 8
Query: 1 IQLFSLVCT 9
IQ+F + CT
Sbjct: 154 IQMFIVGCT 162
>sp|VL1_HPV05|MAJOR capsid protein L1|Human papillomavirus 5
Query: 1 IQLFSLVCT 9
IQ+F + CT
Sbjct: 154 IQMFIVGCT 162
>sp|VL1_HPV49|MAJOR capsid protein L1|Human papillomavirus type 49
Query: 1 IQLFSLVCT 9
+Q+F + CT
Sbjct: 156 VQMFIIGCT 164
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 IQLFSLVCT 9
+Q+F + CT
Sbjct: 154 VQMFIIGCT 162
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 1 IQLFSLVCT 9
+Q+F + CT
Sbjct: 154 VQMFIIGCT 162
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 4 FSLVCTV 10
F+LVC+V
Sbjct: 993 FNLVCSV 999
252|Sequence|1256|1265|LVCTVKGYYD
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 1 LVCTVKGYYD 10
+VC +G YD
Sbjct: 116 VVCDAQGVYD 125
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 1 LVCTVKGY 8
++C +KGY
Sbjct: 70 VLCKIKGY 77
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 2 VCTVKGYY 9
+C V+ YY
Sbjct: 564 LCGVRAYY 571
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 CTVKGY 8
CT+ GY
Sbjct: 91 CTITGY 96
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 TVKGYYD 10
TV+G YD
Sbjct: 285 TVQGLYD 291
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 TVKGYYD 10
TV+G YD
Sbjct: 300 TVQGLYD 306
>sp|TRX1_HCMVM|TRIPLEX capsid protein 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LVCTVKGY 8
L C ++GY
Sbjct: 146 LTCVMRGY 153
>sp|TRX1_HCMVA|TRIPLEX capsid protein 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LVCTVKGY 8
L C ++GY
Sbjct: 146 LTCVMRGY 153
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 3 CTVKGYY 9
C + GYY
Sbjct: 81 CRIIGYY 87
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 2 VCTVKGYY 9
+C+VKG +
Sbjct: 815 LCSVKGMW 822
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 1 LVCTVKGYYD 10
L+C +K Y++
Sbjct: 300 LLCIMKQYFN 309
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LVCTVKGY 8
L+C KG+
Sbjct: 1013 LICGTKGF 1020
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LVCTVKGY 8
L+C KG+
Sbjct: 1013 LICGTKGF 1020
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LVCTVKGYYD 10
L+C +K Y++
Sbjct: 300 LLCIMKQYFN 309
>sp|GC_HHV1K|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain KOS)
Query: 3 CTVKGYY 9
CT YY
Sbjct: 286 CTAAAYY 292
>sp|GC_HHV11|ENVELOPE glycoprotein C|Human herpesvirus 1 (strain 17)
Query: 3 CTVKGYY 9
CT YY
Sbjct: 286 CTAAAYY 292
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 2 VCTVKGYYD 10
+C + GY D
Sbjct: 410 ICRLAGYPD 418
>sp|GC_HHV2G|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain G)
Query: 2 VCTVKGYYD 10
+C + GY D
Sbjct: 409 ICRLAGYPD 417
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 2 VCTVKGYYD 10
+C + GY D
Sbjct: 410 ICRLAGYPD 418
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 1 LVCTVKGYYD 10
++C VKG+ +
Sbjct: 28 VLCIVKGFVN 37
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 LVCTVK 6
++CTVK
Sbjct: 403 VICTVK 408
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 LVCTVK 6
++CTVK
Sbjct: 403 VICTVK 408
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 4 TVKGYYD 10
T++GY D
Sbjct: 133 TIRGYRD 139
253|Sequence|1261|1270|KGYYDPKEMM
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 KGYYDPKE 8
KG YDPKE
Sbjct: 5 KGTYDPKE 12
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 KGYYDPKE 8
KG+YDP E
Sbjct: 4197 KGWYDPVE 4204
>sp|US10_HCMVM|MEMBRANE glycoprotein US10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GYYDPKE 8
GYY P+E
Sbjct: 179 GYYPPRE 185
>sp|US10_HCMVA|UNIQUE short US10 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 GYYDPKE 8
GYY P+E
Sbjct: 179 GYYPPRE 185
>sp|PP150_HCMVM|TEGUMENT protein pp150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GYYDPKE 8
GYYD +E
Sbjct: 366 GYYDEEE 372
>sp|PP150_HCMVA|LARGE structural phosphoprotein|Human cytomegalovirus (strain AD169)
Query: 2 GYYDPKE 8
GYYD +E
Sbjct: 366 GYYDEEE 372
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 1 KGYYDPKE 8
+G++DP E
Sbjct: 201 RGFHDPCE 208
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 YYDP 6
YYDP
Sbjct: 477 YYDP 480
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 3 YYDP 6
YYDP
Sbjct: 477 YYDP 480
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YYDPKE 8
YY PK+
Sbjct: 92 YYSPKD 97
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YYDPKE 8
YY PK+
Sbjct: 92 YYSPKD 97
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YYDPKE 8
YY PK+
Sbjct: 92 YYSPKD 97
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 2 GYYDP 6
GYY P
Sbjct: 94 GYYSP 98
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 GYYDPKE 8
GYYD +
Sbjct: 80 GYYDANQ 86
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 917 YYDPSK 922
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 900 YYDPSK 905
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDP-KEMM 10
YYDP KE++
Sbjct: 915 YYDPGKELI 923
>sp|POL_HV1V9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYYDP-KEMM 10
YYDP KE++
Sbjct: 905 AYYDPSKELI 914
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 917 YYDPSK 922
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 905 YYDPSK 910
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 906 YYDPSK 911
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 911 YYDPSK 916
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 904 YYDPSK 909
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 909 YYDPSK 914
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 905 YYDPSK 910
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 898 YYDPSK 903
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDP-KEMM 10
YYDP KE++
Sbjct: 903 YYDPSKELI 911
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 906 YYDPSK 911
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 905 YYDPSK 910
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 905 YYDPSK 910
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 917 YYDPSK 922
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 907 YYDPSK 912
>sp|POL_HV192|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 901 YYDPSK 906
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 905 YYDPSK 910
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 899 YYDPSK 904
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 904 YYDPSK 909
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 900 YYDPSK 905
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 910 YYDPSK 915
>sp|POL_HV193|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GYYDPKE 8
YYDP +
Sbjct: 899 AYYDPSK 905
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 902 YYDPSK 907
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 905 YYDPSK 910
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDPKE 8
YYDP +
Sbjct: 900 YYDPSK 905
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 3 YYDP-KEMM 10
YYDP KE++
Sbjct: 915 YYDPGKELV 923
254|Sequence|1266|1275|PKEMMDRDQD
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 KEMMDRD 8
KE++DRD
Sbjct: 1598 KELIDRD 1604
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 PKEMMDRDQD 10
PK ++D D+D
Sbjct: 189 PKPVVDYDKD 198
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 PKEMMDRDQD 10
P+E D D D
Sbjct: 2378 PEEKRDDDSD 2387
>sp|VE1_HPV20|REPLICATION protein E1|Human papillomavirus 20
Query: 2 KEMMDRDQD 10
+E+ DRD D
Sbjct: 31 EELFDRDTD 39
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 2 KEMMDRDQD 10
+E+ DRD D
Sbjct: 31 EELFDRDTD 39
>sp|VE1_HPV21|REPLICATION protein E1|Human papillomavirus 21
Query: 2 KEMMDRDQD 10
+E+ DRD D
Sbjct: 31 EELFDRDTD 39
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1600 KELVDKD 1606
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1600 KELVDKD 1606
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1600 KELVDKD 1606
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1599 KELVDKD 1605
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1599 KELVDKD 1605
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1609 KELVDKD 1615
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1608 KELVDKD 1614
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1598 KELVDKD 1604
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1608 KELVDKD 1614
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1597 KELVDKD 1603
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1610 KELVDKD 1616
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1606 KELVDKD 1612
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1602 KELVDKD 1608
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1618 KELVDKD 1624
>sp|POLG_ECHO9|GENOME polyprotein|Echo 9 virus (EV-9) (Coxsackievirus
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 82 KELVDKD 88
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 KEMMDRD 8
KE++D+D
Sbjct: 1611 KELVDKD 1617
255|Sequence|1271|1280|DRDQDCLLPV
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DRDQDCLLP 9
D D DC +P
Sbjct: 1711 DSDSDCSIP 1719
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 DRDQDCLLP 9
D D DC +P
Sbjct: 1712 DSDSDCSIP 1720
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 5 DCLLP 9
DCLLP
Sbjct: 449 DCLLP 453
>sp|BFRF2_EBVB9|LATE gene expression regulator BFRF2|Epstein-Barr virus (strain B95-8)
Query: 2 RDQDCLLPV 10
R CLLP+
Sbjct: 304 RSAHCLLPI 312
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 3 DQDCLLPV 10
+ DC+ PV
Sbjct: 102 ENDCIFPV 109
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 4 QDCLLP 9
+DC+LP
Sbjct: 1107 RDCILP 1112
>sp|VE1_HPV27|REPLICATION protein E1|Human papillomavirus 27
Query: 1 DRDQDC 6
D D+DC
Sbjct: 37 DEDEDC 42
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 5 DCLLPV 10
DC++PV
Sbjct: 457 DCIVPV 462
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 5 DCLLPV 10
DC++PV
Sbjct: 459 DCIVPV 464
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 QDCLLPV 10
+DC LP+
Sbjct: 725 EDCKLPL 731
>sp|DNB2_ADE05|DNA-BINDING protein|Human adenovirus C serotype 5
Query: 1 DRDQDCLLP 9
D QD L+P
Sbjct: 58 DSSQDALVP 66
>sp|DNB2_ADE02|DNA-BINDING protein|Human adenovirus C serotype 2
Query: 1 DRDQDCLLP 9
D QD L+P
Sbjct: 58 DSSQDALVP 66
>sp|X_HBVG3|PROTEIN X|Hepatitis B virus genotype G
Query: 2 RDQDCLLPV 10
RD CL PV
Sbjct: 13 RDVLCLRPV 21
>sp|X_HBVA6|PROTEIN X|Hepatitis B virus genotype A1
Query: 2 RDQDCLLPV 10
RD CL PV
Sbjct: 13 RDVLCLRPV 21
>sp|X_HBVA8|PROTEIN X|Hepatitis B virus genotype A3
Query: 2 RDQDCLLPV 10
RD CL PV
Sbjct: 13 RDVLCLRPV 21
>sp|VE6_HPV47|PROTEIN E6|Human papillomavirus 47
Query: 5 DCLLP 9
DCLLP
Sbjct: 35 DCLLP 39
256|Sequence|1276|1285|CLLPVEEAGI
>sp|UL90_HCMVA|UNCHARACTERIZED protein UL90|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 CLLPVEEA 8
C LPVE A
Sbjct: 59 CRLPVERA 66
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CLLPVEE 7
CL P+EE
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CLLPVEE 7
CL P+EE
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CLLPVEE 7
CL P+EE
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CLLPVEE 7
CL P+EE
Sbjct: 1302 CLRPIEE 1308
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 CLLPVEE 7
CL P+EE
Sbjct: 1302 CLRPIEE 1308
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 2 LLPVEE 7
LLPVEE
Sbjct: 413 LLPVEE 418
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 CLLPVE 6
C LPVE
Sbjct: 323 CFLPVE 328
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LLPVEEA 8
LLP+EEA
Sbjct: 2505 LLPLEEA 2511
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LLPVEEA 8
LLP+EEA
Sbjct: 2505 LLPLEEA 2511
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 LPVEEAG 9
+P++EAG
Sbjct: 485 VPIKEAG 491
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 LPVEEAG 9
+P++EAG
Sbjct: 485 VPIKEAG 491
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 LPVEEAG 9
+P++EAG
Sbjct: 485 VPIKEAG 491
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 LPVEEAG 9
+P++EAG
Sbjct: 485 VPIKEAG 491
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 LPVEEAG 9
+P++EAG
Sbjct: 485 VPIKEAG 491
>sp|PG050_MONPV|PROTEIN OPG050|Monkeypox virus (MPXV)
Query: 2 LLPVEEAGI 10
LLPV+E +
Sbjct: 36 LLPVDEVHV 44
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 CLLPVEE 7
C LP+E+
Sbjct: 1978 CALPLED 1984
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 LPVEEAG 9
+P++EAG
Sbjct: 485 VPIKEAG 491
257|Sequence|1281|1290|EEAGIIWDSV
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIW 7
EEAG++W
Sbjct: 3385 EEAGVLW 3391
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIW 7
EEAG++W
Sbjct: 3382 EEAGVLW 3388
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIW 7
EEAG++W
Sbjct: 3385 EEAGVLW 3391
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIW 7
EEAG++W
Sbjct: 3385 EEAGVLW 3391
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EEAGIIW 7
EEAG++W
Sbjct: 3385 EEAGVLW 3391
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIW 7
EEAG++W
Sbjct: 3385 EEAGVLW 3391
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 EEAGIIWDSV 10
+EAG+++D++
Sbjct: 89 DEAGLVYDAL 98
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 EEAGIIWDSV 10
+EAG+++D++
Sbjct: 89 DEAGLVYDAL 98
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1474 QRAGVLWD 1481
Query: 1 EEAGIIW 7
EE G++W
Sbjct: 3385 EEVGVLW 3391
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EEAGIIWD 8
+ AG++WD
Sbjct: 1064 KRAGVLWD 1071
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 EEAGIIWD 8
+ G+IWD
Sbjct: 1497 QRGGVIWD 1504
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EEAGIIWDS 9
+ +G++WD+
Sbjct: 1474 QRSGVLWDT 1482
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EEAGIIWDS 9
+ +G++WD+
Sbjct: 1473 QRSGVLWDT 1481
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EEAGIIWDS 9
+ +G++WD+
Sbjct: 1474 QRSGVLWDT 1482
>sp|VIRF4_HHV8P|VIRAL IRF4-like protein|Human herpesvirus 8 type P
Query: 4 GIIWDSV 10
G IWDS+
Sbjct: 904 GSIWDSL 910
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 EEAGIIWDSV 10
EEA WD V
Sbjct: 1730 EEAEAEWDEV 1739
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 EEAGIIWDSV 10
EEA WD V
Sbjct: 1760 EEAEAEWDEV 1769
>sp|VE2_HPV45|REGULATORY protein E2|Human papillomavirus 45
Query: 5 IIWDSV 10
++WDS+
Sbjct: 138 VVWDSI 143
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 EEAGIIWDSV 10
+EAG+I++++
Sbjct: 97 DEAGLIYNAL 106
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 6 IWDSV 10
+WDSV
Sbjct: 27 VWDSV 31
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EEAGIIWD 8
+ +G++WD
Sbjct: 1472 QRSGVLWD 1479
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EEAGIIWD 8
+ +G++WD
Sbjct: 1472 QRSGVLWD 1479
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EEAGIIWD 8
+ +G++WD
Sbjct: 1472 QRSGVLWD 1479
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EEAGIIWD 8
+ +G++WD
Sbjct: 1472 QRSGVLWD 1479
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EEAGIIWD 8
+ +G++WD
Sbjct: 1472 QRSGVLWD 1479
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 EEAGIIWDS 9
+ G++WD+
Sbjct: 1504 KRGGVLWDT 1512
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 EEAGIIWDS 9
+ G++WD+
Sbjct: 1504 KRGGVLWDT 1512
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 3 AGIIWDS 9
AG+I+DS
Sbjct: 385 AGLIFDS 391
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 EEAGIIWDS 9
+ G++WD+
Sbjct: 1500 KRGGVLWDT 1508
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 EAGIIWD 8
EAG+ W+
Sbjct: 608 EAGLKWE 614
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 EEAGIIWD 8
+ +G++WD
Sbjct: 1468 KRSGVLWD 1475
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 AGIIW 7
AG++W
Sbjct: 3754 AGVVW 3758
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 AGIIW 7
AG++W
Sbjct: 3754 AGVVW 3758
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 AGIIW 7
AG++W
Sbjct: 3779 AGVVW 3783
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 AGIIW 7
AG++W
Sbjct: 3779 AGVVW 3783
258|Sequence|1286|1295|IWDSVCFFFL
>sp|VU4_HHV6U|PROTEIN U4|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VCFFFL 10
+CFFFL
Sbjct: 385 LCFFFL 390
>sp|VU4_HHV6Z|PROTEIN U4|Human herpesvirus 6B (strain Z29)
Query: 5 VCFFFL 10
+CFFFL
Sbjct: 385 LCFFFL 390
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1982 IWDWVC 1987
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1988 IWDWVC 1993
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1981 IWDWVC 1986
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1984 IWDWVC 1989
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1984 IWDWVC 1989
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1981 IWDWVC 1986
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1986 IWDWVC 1991
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 IWDSVC 6
IWD VC
Sbjct: 1986 IWDWVC 1991
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 IWDSVCFFF 9
++ CFFF
Sbjct: 242 VYGDACFFF 250
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 1 IWDSVCFFF 9
++ CFFF
Sbjct: 242 VYGDACFFF 250
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 IWDSVCFFF 9
++ CFFF
Sbjct: 242 VYGDACFFF 250
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 IWDSVCFFF 9
++ CFFF
Sbjct: 242 VYGDACFFF 250
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 5 VCFFF 9
VCFFF
Sbjct: 84 VCFFF 88
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 VCFFF 9
VCFFF
Sbjct: 84 VCFFF 88
>sp|VL1_HPV38|MAJOR capsid protein L1|Human papillomavirus 38
Query: 1 IWDSVCFFFL 10
++ CFFF+
Sbjct: 241 VYGDSCFFFV 250
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 5 VCFFF 9
VCFFF
Sbjct: 84 VCFFF 88
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1978 VWDWVC 1983
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1985 VWDWVC 1990
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1984 VWDWVC 1989
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1984 VWDWVC 1989
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1984 VWDWVC 1989
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 3 DSVCFFFL 10
D+VCF L
Sbjct: 314 DNVCFLLL 321
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1984 VWDWVC 1989
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 IWDSVC 6
+WD VC
Sbjct: 1985 VWDWVC 1990
>sp|VL1_HPV24|MAJOR capsid protein L1|Human papillomavirus 24
Query: 1 IWDSVCFFF 9
++ CFFF
Sbjct: 243 VYGDSCFFF 251
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 IWDSVC 6
IW+ VC
Sbjct: 360 IWNKVC 365
>sp|MATRX_PI4HB|MATRIX protein|Human parainfluenza 4b virus (strain
Query: 3 DSVCFF 8
DS+CF
Sbjct: 55 DSICFL 60
>sp|MATRX_PI4HA|MATRIX protein|Human parainfluenza 4a virus (strain
Query: 3 DSVCFF 8
DS+CF
Sbjct: 55 DSICFL 60
>sp|RIR1_VZVO|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Oka vaccine)
Query: 3 DSVCFFFL 10
+S+C FFL
Sbjct: 144 ESLCQFFL 151
>sp|RIR1_VZVD|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Varicella-zoster virus (strain Dumas)
Query: 3 DSVCFFFL 10
+S+C FFL
Sbjct: 144 ESLCQFFL 151
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 6 CFFF 9
CFFF
Sbjct: 64 CFFF 67
>sp|TEG6_HHV1E|TEGUMENT protein UL55|Human herpesvirus 1 (strain HFEM)
Query: 6 CFFF 9
CFFF
Sbjct: 64 CFFF 67
>sp|TEG6_HHV11|TEGUMENT protein UL55|Human herpesvirus 1 (strain 17)
Query: 6 CFFF 9
CFFF
Sbjct: 64 CFFF 67
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 1 IWDSVC 6
+WD +C
Sbjct: 1676 LWDYIC 1681
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 IWDSVC 6
IW+ VC
Sbjct: 1984 IWEWVC 1989
>sp|U131A_HCMVM|PROTEIN UL131A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 IWDSVCF 7
+W SVC
Sbjct: 6 VWLSVCL 12
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 WDSVC 6
WDS C
Sbjct: 946 WDSFC 950
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 IWDSVCFF 8
+W+ +C+
Sbjct: 431 LWEKLCYL 438
259|Sequence|1291|1300|CFFFLLLQRR
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 FFFLLLQRR 10
FF L++QR+
Sbjct: 2189 FFLLMMQRK 2197
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 FFFLLLQRR 10
FF L++QR+
Sbjct: 2190 FFLLMMQRK 2198
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 FFFLLLQRR 10
FF L++QR+
Sbjct: 2190 FFLLMMQRK 2198
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 FFFLLLQRR 10
FF L++QR+
Sbjct: 2190 FFLLMMQRK 2198
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 FFFLLLQRR 10
FF L++QR+
Sbjct: 2190 FFLLMMQRK 2198
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 3 FFLLLQR 9
FFLL+QR
Sbjct: 2192 FFLLMQR 2198
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 3 FFLLLQR 9
FFLL+QR
Sbjct: 2188 FFLLMQR 2194
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 3 FFLLLQR 9
FFLL+QR
Sbjct: 2192 FFLLMQR 2198
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 CFFFLLLQRR 10
C FFLL++ +
Sbjct: 2188 CTFFLLMRHK 2197
>sp|TEGU_HCMV|TEGUMENT protein|Human cytomegalovirus (HHV-5) (Human herpesvirus
Query: 2 FFFLLLQRR 10
FF LLL +R
Sbjct: 186 FFMLLLYKR 194
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 CFFFLLLQ 8
CF +LL+Q
Sbjct: 1027 CFKYLLIQ 1034
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 CFFFLLLQ 8
CF +LL+Q
Sbjct: 1030 CFKYLLIQ 1037
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 CFFFLLLQ 8
CF +LL+Q
Sbjct: 1026 CFKYLLIQ 1033
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 CFFFLLLQ 8
CF +LL+Q
Sbjct: 1026 CFKYLLIQ 1033
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 FFFLLLQR 9
FFFLL R
Sbjct: 199 FFFLLALR 206
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 FFFLLLQR 9
FFFLL R
Sbjct: 199 FFFLLALR 206
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 CFFFLLL 7
C +FL+L
Sbjct: 261 CIYFLVL 267
260|Sequence|1296|1305|LLQRRVFLSH
>sp|NSP6_ROTHT|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 LLQRRVFLSH 10
LLQRR+FL +
Sbjct: 4 LLQRRLFLEN 13
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 LLQRRVFLSH 10
+L+R+VF +H
Sbjct: 141 VLERQVFWNH 150
>sp|VPR_HV2EH|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 LLQRRVFL 8
LLQR +FL
Sbjct: 68 LLQRALFL 75
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 5 RVFLSH 10
R+FLSH
Sbjct: 353 RLFLSH 358
>sp|HELI_HHV6U|DNA replication helicase|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 RVFLSH 10
R+FLSH
Sbjct: 353 RLFLSH 358
>sp|HELI_HHV6Z|DNA replication helicase|Human herpesvirus 6B (strain Z29)
Query: 5 RVFLSH 10
R+FLSH
Sbjct: 353 RLFLSH 358
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 RVFLSH 10
R+FLSH
Sbjct: 346 RLFLSH 351
>sp|NSP6_ROTWI|NON-STRUCTURAL protein 6|Rotavirus A (isolate RVA/Human/United
Query: 1 LLQRRVFLSH 10
LLQR++FL +
Sbjct: 4 LLQRQLFLEN 13
>sp|NSP6_ROTAD|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 LLQRRVFLSH 10
LLQR++FL +
Sbjct: 4 LLQRQLFLEN 13
>sp|NSP6_ROTHP|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 LLQRRVFLSH 10
LLQR++FL +
Sbjct: 4 LLQRQLFLEN 13
>sp|CVC2_EBVG|CAPSID vertex component 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 LQRRVF 7
+QRRVF
Sbjct: 182 MQRRVF 187
>sp|CVC2_EBVB9|CAPSID vertex component 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LQRRVF 7
+QRRVF
Sbjct: 182 MQRRVF 187
>sp|CVC2_EBVA8|CAPSID vertex component 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 LQRRVF 7
+QRRVF
Sbjct: 182 MQRRVF 187
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 2 LQRRVF 7
+QRRVF
Sbjct: 176 MQRRVF 181
>sp|VTF3S_MONPV|INTERMEDIATE transcription factor 3 small|Monkeypox virus (MPXV)
Query: 1 LLQRRVFLSH 10
LQR FL H
Sbjct: 58 FLQRLYFLDH 67
>sp|VTF3S_VARV|INTERMEDIATE transcription factor 3 small|Variola virus
Query: 1 LLQRRVFLSH 10
LQR FL H
Sbjct: 58 FLQRLYFLDH 67
>sp|VTF3S_VAR67|INTERMEDIATE transcription factor 3 small|Variola virus (isolate
Query: 1 LLQRRVFLSH 10
LQR FL H
Sbjct: 58 FLQRLYFLDH 67
>sp|NSP6_ROTHL|NON-STRUCTURAL protein 6|Rotavirus A (strain
Query: 1 LLQRRVFLSH 10
LLQR++FL +
Sbjct: 4 LLQRQLFLEN 13
>sp|NSP6_ROTHW|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/United
Query: 1 LLQRRVFLS 9
LLQR++FL
Sbjct: 4 LLQRQLFLE 12
>sp|VTF3S_VACCC|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Copenhagen)
Query: 1 LLQRRVFLSH 10
LQR FL H
Sbjct: 58 FLQRLYFLDH 67
>sp|NSP6_ROTHK|NON-STRUCTURAL protein 6|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 1 LLQRRVFLSH 10
LLQR++FL +
Sbjct: 4 LLQRQLFLEN 13
>sp|VTF3S_VACCA|INTERMEDIATE transcription factor 3 small|Vaccinia virus (strain Ankara)
Query: 1 LLQRRVFLSH 10
LQR FL H
Sbjct: 58 FLQRLYFLDH 67
261|Sequence|1301|1310|VFLSHYYLHV
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 2 FLSHYYLH 9
F++HY+L+
Sbjct: 1858 FIAHYHLN 1865
>sp|RAP94_MONPV|RNA polymerase-associated transcription-specificity factor
Query: 1 VFLSHYYLH 9
+FLS Y+LH
Sbjct: 276 IFLSSYHLH 284
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 HYYLHV 10
H++LHV
Sbjct: 187 HFFLHV 192
>sp|RAP94_VACCC|RNA polymerase-associated transcription-specificity factor
Query: 1 VFLSHYYLH 9
+FLS Y+LH
Sbjct: 276 IFLSSYHLH 284
>sp|RAP94_VARV|RNA polymerase-associated transcription-specificity factor
Query: 1 VFLSHYYLH 9
+FLS Y+LH
Sbjct: 276 IFLSSYHLH 284
>sp|RAP94_VAR67|RNA polymerase-associated transcription-specificity factor
Query: 1 VFLSHYYLH 9
+FLS Y+LH
Sbjct: 276 IFLSSYHLH 284
>sp|RAP94_VACCA|RNA polymerase-associated transcription-specificity factor
Query: 1 VFLSHYYLH 9
+FLS Y+LH
Sbjct: 276 IFLSSYHLH 284
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 3 LSHYYLHV 10
+ HY++H+
Sbjct: 771 MEHYFVHI 778
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 LSHYYL 8
LSHYY+
Sbjct: 246 LSHYYV 251
>sp|PKG2_ADE05|PACKAGING protein 2|Human adenovirus C serotype 5
Query: 5 HYYLHV 10
HYY H+
Sbjct: 166 HYYRHL 171
>sp|PKG2_ADE02|PACKAGING protein 2|Human adenovirus C serotype 2
Query: 5 HYYLHV 10
HYY H+
Sbjct: 165 HYYRHL 170
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 3 LSHYYL 8
LSHYY+
Sbjct: 232 LSHYYV 237
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 2 FLSHYYLHV 10
L+H+ +HV
Sbjct: 504 LLNHFVIHV 512
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 2 FLSHYYLHV 10
L+H+ +HV
Sbjct: 504 LLNHFVIHV 512
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 2 FLSHYYLHV 10
L+H+ +HV
Sbjct: 504 LLNHFVIHV 512
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 3 LSHYYL 8
LSHYY+
Sbjct: 232 LSHYYV 237
>sp|HELI_HHV7J|DNA replication helicase|Human herpesvirus 7 (strain JI)
Query: 1 VFLSHY 6
+FLSHY
Sbjct: 354 LFLSHY 359
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VFLSHY 6
+FL+HY
Sbjct: 252 LFLAHY 257
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VFLSHY 6
+FL+HY
Sbjct: 252 LFLAHY 257
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VFLSHY 6
+FL+HY
Sbjct: 252 LFLAHY 257
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VFLSHY 6
+FL+HY
Sbjct: 252 LFLAHY 257
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 VFLSHY 6
+FL+HY
Sbjct: 252 LFLAHY 257
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 1 VFLSHYY 7
VFLSH Y
Sbjct: 555 VFLSHRY 561
262|Sequence|1306|1315|YYLHVRADLQ
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 YYLHVRADLQ 10
YY+H R D++
Sbjct: 86 YYVHQRIDVR 95
>sp|GAG_HV1MP|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 YYLHVRADLQ 10
YY+H R D++
Sbjct: 86 YYVHQRIDVR 95
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 YYLHVRA 7
YY+H RA
Sbjct: 86 YYVHQRA 92
>sp|GAG_HV1VI|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 YYLHVRA 7
YY+H RA
Sbjct: 86 YYVHQRA 92
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 YYLHVR 6
Y+LHVR
Sbjct: 1420 YHLHVR 1425
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 YYLHVR 6
Y+LHV+
Sbjct: 1744 YFLHVK 1749
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 YYLHVRADLQ 10
Y+L + DLQ
Sbjct: 897 YHLATKEDLQ 906
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 YYLHVRA 7
Y++H RA
Sbjct: 285 YFIHFRA 291
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 YLHVRAD 8
Y H RAD
Sbjct: 477 YTHKRAD 483
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 YLHVRAD 8
Y H RAD
Sbjct: 477 YTHKRAD 483
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 YLHVRAD 8
Y H RAD
Sbjct: 476 YTHKRAD 482
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 YLHVRAD 8
Y H RAD
Sbjct: 477 YTHKRAD 483
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 2 YLHVRAD 8
Y H RAD
Sbjct: 475 YTHKRAD 481
263|Sequence|1311|1320|RADLQATALL
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 RADLQATALL 10
RAD Q+TA L
Sbjct: 2 RADRQSTAKL 11
264|Sequence|1316|1325|ATALLASRGF
>sp|HN_PI2H|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (HPIV-2)
Query: 1 ATALLASRGF 10
A+ALL + GF
Sbjct: 512 ASALLNTTGF 521
>sp|HN_PI2HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 2 virus (strain
Query: 1 ATALLASRGF 10
A+ALL + GF
Sbjct: 512 ASALLNTTGF 521
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 TALLASRGF 10
T LLA+ GF
Sbjct: 383 TGLLATSGF 391
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 TALLASRGF 10
T LLA+ GF
Sbjct: 383 TGLLATSGF 391
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 TALLASRGF 10
T LLA+ GF
Sbjct: 383 TGLLATSGF 391
265|Sequence|1321|1330|ASRGFALYNA
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 GFALYN 9
GFALY+
Sbjct: 1031 GFALYD 1036
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 RGFALYNA 10
R F +YNA
Sbjct: 4402 RAFDIYNA 4409
>sp|ICP27_HCMVM|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain Merlin)
Query: 5 FALYNA 10
FA+YNA
Sbjct: 327 FAVYNA 332
>sp|ICP27_HCMVA|MRNA export factor ICP27 homolog|Human cytomegalovirus (strain AD169)
Query: 5 FALYNA 10
FA+YNA
Sbjct: 327 FAVYNA 332
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 3 RGFALYNA 10
+GF+LY++
Sbjct: 170 QGFSLYHS 177
>sp|SPIKE_ADE02|FIBER protein|Human adenovirus C serotype 2
Query: 2 SRGFALYNA 10
+RG L+NA
Sbjct: 302 NRGLYLFNA 310
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RGFALYNA 10
RG+A+Y A
Sbjct: 384 RGYAMYLA 391
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 RGFALYNA 10
RG+A+Y A
Sbjct: 384 RGYAMYLA 391
266|Sequence|1326|1335|ALYNAANLKS
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 ALYNAANLKS 10
+ NA+N+KS
Sbjct: 1425 GIINASNIKS 1434
>sp|POLN_RRVT|POLYPROTEIN nsP1234|Ross river virus (strain T48)
Query: 1 ALYNAANLKS 10
+ NA+N+KS
Sbjct: 94 GIINASNIKS 103
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LYNAANLK 9
LY+A+N+K
Sbjct: 1840 LYDASNVK 1847
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 1 ALYNAANLK 9
ALY + NLK
Sbjct: 399 ALYMSENLK 407
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 ALYNAANLK 9
A YN+AN K
Sbjct: 399 ADYNSANFK 407
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LYNAANLK 9
LY+A+N+K
Sbjct: 1840 LYDASNVK 1847
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 3 YNAANLKS 10
YNAAN ++
Sbjct: 918 YNAANAEA 925
267|Sequence|1331|1340|ANLKSIDFHR
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 ANLKSIDFHR 10
AN+ S+DF+R
Sbjct: 235 ANIDSVDFNR 244
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 2 NLKSIDFH 9
NL++ID H
Sbjct: 1837 NLEAIDLH 1844
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 2 NLKSIDFH 9
NL++ID H
Sbjct: 1837 NLEAIDLH 1844
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 NLKSIDFH 9
NL++ID H
Sbjct: 1837 NLEAIDLH 1844
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 2 NLKSIDFHR 10
NL++ FHR
Sbjct: 217 NLETTAFHR 225
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 2 NLKSIDFHR 10
NL++ FHR
Sbjct: 216 NLETTAFHR 224
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 NLKSIDFHR 10
NL++ FHR
Sbjct: 217 NLETTAFHR 225
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 2 NLKSIDFHR 10
NL++ FHR
Sbjct: 217 NLETTAFHR 225
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 LKSIDFHR 10
++SIDF R
Sbjct: 2061 IRSIDFER 2068
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 ANLKSIDFH 9
AN+ S+DF+
Sbjct: 238 ANIDSVDFN 246
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 1 ANLKSIDFH 9
AN+ S+DF+
Sbjct: 235 ANIDSVDFN 243
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 ANLKSIDFH 9
AN+ S+DF+
Sbjct: 235 ANIDSVDFN 243
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 KSIDFH 9
KSI FH
Sbjct: 166 KSIQFH 171
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 ANLKSIDFH 9
+N+K I++H
Sbjct: 867 SNVKIINYH 875
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 4 KSIDFHR 10
KS+DF++
Sbjct: 58 KSVDFYQ 64
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 1 ANLKSID 7
AN++S+D
Sbjct: 253 ANIRSVD 259
268|Sequence|1336|1345|IDFHRRIEEK
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 DFHRRIEE 9
D HRR+ E
Sbjct: 34 DLHRRVAE 41
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 IDFHRRIEEK 10
ID H IEE+
Sbjct: 701 IDLHIEIEEQ 710
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 IDFHRRIEEK 10
ID H IEE+
Sbjct: 701 IDLHIEIEEQ 710
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 IDFHRRIEEK 10
ID H IEE+
Sbjct: 700 IDLHIEIEEQ 709
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 IDFHRRIEE 9
+D HRRI +
Sbjct: 1015 VDAHRRITD 1023
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 IDFHRRIEE 9
+D HRRI +
Sbjct: 1015 VDAHRRITD 1023
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 IDFHRRIEE 9
+D HRRI +
Sbjct: 1015 VDAHRRITD 1023
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 IDFHRRIEE 9
+D HRRI +
Sbjct: 1015 VDAHRRITD 1023
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 IDFHRRIEE 9
+D HRRI +
Sbjct: 1020 VDAHRRITD 1028
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 IDFHRRIEE 9
+D HRRI +
Sbjct: 1020 VDAHRRITD 1028
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 IDFHRRI 7
I FHRR+
Sbjct: 104 IKFHRRL 110
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 HRRIEEK 10
H+RIE+K
Sbjct: 89 HQRIEKK 95
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 IDFHRRIEE 9
I H RIEE
Sbjct: 1279 ITLHPRIEE 1287
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 3 FHRRIEEK 10
FH++ EE+
Sbjct: 261 FHKKFEEE 268
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 IDFHRRIEEK 10
+D H+ +EK
Sbjct: 2170 LDLHKTTDEK 2179
269|Sequence|1341|1350|RIEEKSLAQL
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 IEEKSLAQ 9
IE+K+LAQ
Sbjct: 572 IEQKALAQ 579
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 IEEKSLAQ 9
IE+K+LAQ
Sbjct: 572 IEQKALAQ 579
270|Sequence|1346|1355|SLAQLKRQME
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 LAQLKRQME 10
+AQL+R+ME
Sbjct: 668 VAQLRRKME 676
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 LAQLKRQME 10
+AQL+R+ME
Sbjct: 668 VAQLRRKME 676
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3106 AQLVRQME 3113
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3106 AQLVRQME 3113
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3106 AQLIRQME 3113
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3106 AQLIRQME 3113
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3106 AQLIRQME 3113
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3109 AQLIRQME 3116
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3105 AQLIRQME 3112
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 AQLKRQME 10
AQL RQME
Sbjct: 3108 AQLIRQME 3115
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 SLAQLKRQME 10
SLA LKR +E
Sbjct: 1019 SLADLKRMIE 1028
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 SLAQLKRQME 10
SLA LKR ++
Sbjct: 1019 SLADLKRMID 1028
>sp|ORF1_VZVD|STRUCTURAL protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 AQLKRQME 10
AQLK QM+
Sbjct: 66 AQLKMQMD 73
>sp|ORF1_VZVO|STRUCTURAL protein 1|Varicella-zoster virus (strain Oka vaccine)
Query: 3 AQLKRQME 10
AQLK QM+
Sbjct: 66 AQLKMQMD 73
271|Sequence|1351|1360|KRQMERIRAK
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 KRQMERIRAK 10
KR++ER RAK
Sbjct: 971 KRELERQRAK 980
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 KRQMERIR 8
K Q+ERIR
Sbjct: 1328 KNQIERIR 1335
272|Sequence|1356|1365|RIRAKQEKHR
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 RIRAKQEKH 9
R+R +Q+KH
Sbjct: 2022 RLRGEQKKH 2030
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 RIRAKQEKH 9
R+R +Q KH
Sbjct: 2023 RLRTEQRKH 2031
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 5 KQEKHR 10
KQEKH+
Sbjct: 250 KQEKHQ 255
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RIRAKQEKHR 10
+I+ KQE+H+
Sbjct: 103 KIKEKQEQHK 112
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RIRAKQEKHR 10
+I+ KQE+H+
Sbjct: 103 KIKEKQEQHK 112
>sp|GAG_HV1YB|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RIRAKQEKHR 10
+I+ KQE+H+
Sbjct: 103 KIKEKQEQHK 112
>sp|GAG_HV1YF|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 RIRAKQEKHR 10
+I+ KQE+H+
Sbjct: 103 KIKEKQEQHK 112
273|Sequence|1361|1370|QEKHRQGRVD
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 QEKHRQGR 8
+E+H QGR
Sbjct: 2951 RERHLQGR 2958
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 EKHRQGRVD 10
E+H GR D
Sbjct: 588 EQHESGRSD 596
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 EKHRQGRVD 10
++HR R+D
Sbjct: 749 DRHRDCRID 757
>sp|LRP2_HHV1F|LATENCY-RELATED protein 2|Human herpesvirus 1 (strain F)
Query: 3 KHRQGR 8
+HRQG+
Sbjct: 56 QHRQGK 61
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 670 KTKHGRGRV 678
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QEKHRQGR 8
+E H+QG+
Sbjct: 2931 RELHKQGK 2938
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 669 KTKHGRGRV 677
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 669 KTKHGRGRV 677
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QEKHRQGR 8
+E H+QG+
Sbjct: 2931 RELHKQGK 2938
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 QEKHRQGR 8
+E H+QG+
Sbjct: 2930 RELHKQGK 2937
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 670 KTKHGRGRV 678
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 669 KTKHGRGRV 677
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 669 KTKHGRGRV 677
>sp|VE1_HPV2A|REPLICATION protein E1|Human papillomavirus type 2a
Query: 1 QEKHRQG 7
QE+ RQG
Sbjct: 160 QEEERQG 166
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 669 KTKHGRGRV 677
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 QEKHRQGRVD 10
Q+K +QG+ D
Sbjct: 112 QQKTQQGKAD 121
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 QEKHRQGRV 9
+ KH +GRV
Sbjct: 669 KTKHGRGRV 677
274|Sequence|1366|1375|QGRVDRSRPQ
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 QGRVDRSRPQ 10
QG V++SRP+
Sbjct: 1658 QGNVEKSRPE 1667
>sp|MB43_HHV11|MEMBRANE protein UL43|Human herpesvirus 1 (strain 17)
Query: 1 QGRVDRSRPQ 10
QGRVD RP
Sbjct: 16 QGRVDDGRPH 25
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 QGRVDRSRP 9
QG V++SRP
Sbjct: 1658 QGEVEKSRP 1666
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 QGRVDRSRP 9
QG V++SRP
Sbjct: 1658 QGEVEKSRP 1666
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 QGRVDRSRPQ 10
QG ++SRP+
Sbjct: 1660 QGEAEKSRPE 1669
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 QGRVDRSRPQ 10
QG ++SRP+
Sbjct: 1660 QGEAEKSRPE 1669
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 QGRVDRSRP 9
QG ++SRP
Sbjct: 1658 QGEAEKSRP 1666
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 QGRVDRSRP 9
QG ++SRP
Sbjct: 1658 QGEAEKSRP 1666
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 QGRVDRSRP 9
QG ++SRP
Sbjct: 1658 QGEAEKSRP 1666
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 QGRVDRSRP 9
QG ++SRP
Sbjct: 1658 QGEAEKSRP 1666
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 QGRVDRSRP 9
QG ++SRP
Sbjct: 1658 QGEAEKSRP 1666
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 QGRVDRSRPQ 10
Q R+DR+R +
Sbjct: 289 QARLDRNREE 298
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 QGRVDRS 7
QGR+DR+
Sbjct: 1682 QGRLDRA 1688
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 QGRVDRS 7
QGR+DR+
Sbjct: 1683 QGRLDRA 1689
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 GRVDRSRP 9
GRV SRP
Sbjct: 313 GRVFHSRP 320
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GRVDRSRP 9
R+DR RP
Sbjct: 191 ARLDRPRP 198
275|Sequence|1371|1380|RSRPQDTLGP
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 4 PQDTLGP 10
PQDT+GP
Sbjct: 1742 PQDTIGP 1748
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 2 SRPQDTLGP 10
S P+D+ GP
Sbjct: 336 SEPEDSAGP 344
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 4 PQDTLGP 10
P+D +GP
Sbjct: 870 PRDVMGP 876
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 1 RSRPQDTLGP 10
S P DT+GP
Sbjct: 95 ESIPLDTIGP 104
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 RSRPQDT 7
R RPQ+T
Sbjct: 428 RGRPQET 434
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 RSRPQDT 7
R RPQ+T
Sbjct: 428 RGRPQET 434
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 RSRPQDT 7
R RPQ+T
Sbjct: 428 RGRPQET 434
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 RSRPQDT 7
R RPQ+T
Sbjct: 428 RGRPQET 434
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 RSRPQDT 7
R RPQ+T
Sbjct: 428 RGRPQET 434
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 RSRPQDT 7
R RPQ+T
Sbjct: 428 RGRPQET 434
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 RSRPQDTLG 9
R RP+ T+G
Sbjct: 1645 RHRPKKTIG 1653
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 RSRPQDTLG 9
R RP+ T+G
Sbjct: 1645 RHRPKKTIG 1653
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 RSRPQDTLG 9
R+RP+D +
Sbjct: 1520 RARPEDLIA 1528
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 5 QDTLGP 10
QDTL P
Sbjct: 629 QDTLNP 634
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 4 PQDTLGP 10
PQ T GP
Sbjct: 909 PQKTKGP 915
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 4 PQDTLGP 10
PQ T GP
Sbjct: 924 PQKTKGP 930
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 5 QDTLGP 10
Q+TLGP
Sbjct: 292 QNTLGP 297
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 6 DTLGP 10
DTLGP
Sbjct: 217 DTLGP 221
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 6 DTLGP 10
DTLGP
Sbjct: 217 DTLGP 221
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 6 DTLGP 10
DTLGP
Sbjct: 219 DTLGP 223
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 6 DTLGP 10
DTLGP
Sbjct: 217 DTLGP 221
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 4 PQDTLGP 10
PQ T GP
Sbjct: 910 PQKTKGP 916
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 6 DTLGP 10
DTLGP
Sbjct: 217 DTLGP 221
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 4 PQDTLGP 10
PQ T GP
Sbjct: 909 PQKTKGP 915
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 6 DTLGP 10
DTLGP
Sbjct: 217 DTLGP 221
>sp|CAPSD_HASV7|CAPSID polyprotein VP90|Human astrovirus-7 (HAstV-7)
Query: 6 DTLGP 10
DTLGP
Sbjct: 218 DTLGP 222
276|Sequence|1376|1385|DTLGPKDPGL
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 DTLGPKDPG 9
D +GP +PG
Sbjct: 2068 DLIGPNNPG 2076
>sp|GLYCO_VSNJO|GLYCOPROTEIN stomatitis New Jersey virus
Query: 3 LGPKDPGL 10
LGPK+PG+
Sbjct: 325 LGPKNPGV 332
>sp|VL2_HPV13|MINOR capsid protein L2|Human papillomavirus 13
Query: 1 DTLGPKDPGL 10
DT+GP DP +
Sbjct: 95 DTVGPTDPSI 104
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 DTLGPKDPGL 10
D + PKD G
Sbjct: 874 DIMSPKDKGF 883
>sp|VL2_HPV42|MINOR capsid protein L2|Human papillomavirus 42
Query: 1 DTLGPKDPGL 10
DT+GP DP +
Sbjct: 95 DTVGPSDPSI 104
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 DTLGPKD 7
DTL PKD
Sbjct: 503 DTLTPKD 509
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|GLYCO_VSIVA|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|US10_CHV1|VIRION protein US10 homolog|Cercopithecine herpesvirus 1 (CeHV-1)
Query: 2 TLGPKDP 8
T GP+DP
Sbjct: 54 TSGPRDP 60
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 LGPKDPG 9
L PK+PG
Sbjct: 321 LAPKNPG 327
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 1 DTLGPKDPGL 10
DT+GP DP +
Sbjct: 95 DTIGPTDPSV 104
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 3 LGPKDP 8
LGP DP
Sbjct: 534 LGPVDP 539
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 DTLGPKDP 8
D GP DP
Sbjct: 389 DDAGPADP 396
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 1 DTLGPKDP 8
D GP DP
Sbjct: 389 DDAGPADP 396
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 1 DTLGPKDP 8
D GP DP
Sbjct: 389 DDAGPADP 396
>sp|NEC2_VZVD|NUCLEAR egress protein 2|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 LGPKDP 8
+GP+DP
Sbjct: 169 MGPEDP 174
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 1 DTLGPKDP 8
D GP DP
Sbjct: 389 DDAGPADP 396
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 TLGPKDP 8
T GP DP
Sbjct: 106 TWGPNDP 112
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 DTLGPKDPGL 10
DT+ P DP +
Sbjct: 99 DTVAPSDPSI 108
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TLGPKDP 8
T GP DP
Sbjct: 106 TWGPSDP 112
>sp|VL2_HPV07|MINOR capsid protein L2|Human papillomavirus 7
Query: 1 DTLGPKDPGL 10
DT+ P DP +
Sbjct: 99 DTVAPTDPSI 108
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 DTLGPKDP 8
D GP DP
Sbjct: 389 DDAGPADP 396
>sp|CAPSD_HASV5|CAPSID polyprotein VP90|Human astrovirus-5 (HAstV-5)
Query: 1 DTLGP 5
DTLGP
Sbjct: 216 DTLGP 220
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 TLGPKDP 8
T GP DP
Sbjct: 106 TWGPTDP 112
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TLGPKDP 8
T GP DP
Sbjct: 106 TWGPTDP 112
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 DTLGPKDPG 9
DT+ P DP
Sbjct: 105 DTIAPVDPA 113
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 GPKDPGL 10
PKDP L
Sbjct: 188 APKDPPL 194
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 DTLGP 5
DTLGP
Sbjct: 217 DTLGP 221
>sp|CAPSD_HASV2|CAPSID polyprotein VP90|Human astrovirus-2 (HAstV-2)
Query: 1 DTLGP 5
DTLGP
Sbjct: 217 DTLGP 221
>sp|VGP_EBORE|ENVELOPE glycoprotein|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 GPKDPGL 10
GP PGL
Sbjct: 476 GPSQPGL 482
>sp|CAPSD_HASV6|CAPSID polyprotein VP90|Human astrovirus-6 (HAstV-6)
Query: 1 DTLGP 5
DTLGP
Sbjct: 217 DTLGP 221
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 5 PKDPG 9
P+DPG
Sbjct: 396 PQDPG 400
>sp|VGP_EBORR|ENVELOPE glycoprotein|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 GPKDPGL 10
GP PGL
Sbjct: 476 GPSQPGL 482
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 3 LGPKDPG 9
+GP +PG
Sbjct: 957 VGPAEPG 963
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 DTLGPKDPGL 10
+++GP DP +
Sbjct: 94 ESVGPTDPSI 103
>sp|VL2_HPV44|MINOR capsid protein L2|Human papillomavirus 44
Query: 1 DTLGPKDPGL 10
DT+ P DP +
Sbjct: 95 DTVAPGDPSI 104
>sp|CAPSD_HASV8|CAPSID polyprotein VP90|Human astrovirus-8 (HAstV-8)
Query: 1 DTLGP 5
DTLGP
Sbjct: 217 DTLGP 221
>sp|VL2_HPV55|MINOR capsid protein L2|Human papillomavirus type 55
Query: 1 DTLGPKDPGL 10
DT+ P DP +
Sbjct: 95 DTVAPGDPSI 104
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV190|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 1 DTLGPKD 7
DT+GP D
Sbjct: 93 DTIGPSD 99
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 DTLGPKDPGL 10
D +GP DP +
Sbjct: 96 DPVGPSDPSI 105
>sp|CAPSD_HASV3|CAPSID polyprotein VP90|Human astrovirus-3 (HAstV-3)
Query: 1 DTLGP 5
DTLGP
Sbjct: 219 DTLGP 223
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 284 GPKEP 288
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 DTLGPKDP 8
DT+G DP
Sbjct: 452 DTVGGYDP 459
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 DTLGPKDPGL 10
+++GP DP +
Sbjct: 94 ESVGPTDPSI 103
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 287 GPKEP 291
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 5 PKDPG 9
P+DPG
Sbjct: 100 PRDPG 104
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 5 PKDPG 9
P+DPG
Sbjct: 100 PRDPG 104
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 5 PKDPG 9
P+DPG
Sbjct: 100 PRDPG 104
>sp|GAG_HV1W2|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 294 GPKEP 298
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 290 GPKEP 294
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
>sp|CAPSD_HASV1|CAPSID polyprotein VP90|Human astrovirus-1 (HAstV-1)
Query: 1 DTLGP 5
DTLGP
Sbjct: 217 DTLGP 221
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 DTLGPKDPGL 10
+++GP DP +
Sbjct: 94 ESVGPTDPSI 103
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 GPKDP 8
GPK+P
Sbjct: 288 GPKEP 292
277|Sequence|1381|1390|KDPGLEPGPD
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PGLEPGP 9
PG +PGP
Sbjct: 297 PGPDPGP 303
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PGLEPGP 9
PG +PGP
Sbjct: 297 PGPDPGP 303
>sp|NSP3_ROTHC|NON-STRUCTURAL protein 3|Rotavirus C (isolate RVC/Human/United
Query: 2 DPGLEPGPD 10
D L PGPD
Sbjct: 327 DIELNPGPD 335
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 KDPGLEPGPD 10
++PG P PD
Sbjct: 604 RNPGKRPTPD 613
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 KDPGLEPGPD 10
++PG P PD
Sbjct: 604 RNPGKRPTPD 613
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 LEPGP 9
LEPGP
Sbjct: 199 LEPGP 203
Query: 2 DPGLEP 7
DP LEP
Sbjct: 52 DPRLEP 57
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 5 LEPGP 9
LEPGP
Sbjct: 199 LEPGP 203
Query: 2 DPGLEP 7
DP LEP
Sbjct: 52 DPRLEP 57
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PGLEPGP 9
PG+ P P
Sbjct: 201 PGIRPPP 207
>sp|VGP_EBOSU|ENVELOPE glycoprotein|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 PGLEPGP 9
PG PGP
Sbjct: 445 PGSSPGP 451
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 DPGLEPG 8
DPG PG
Sbjct: 261 DPGCPPG 267
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 DPGLEPG 8
DPG PG
Sbjct: 261 DPGCPPG 267
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 DPGLEPG 8
DPG PG
Sbjct: 261 DPGCPPG 267
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GLEPGP 9
GL+PGP
Sbjct: 50 GLDPGP 55
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GLEPGP 9
GL+PGP
Sbjct: 50 GLDPGP 55
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GLEPGP 9
GL+PGP
Sbjct: 50 GLDPGP 55
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 5 LEPGPD 10
LEPG D
Sbjct: 1778 LEPGED 1783
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 5 LEPGPD 10
LEPG D
Sbjct: 1778 LEPGED 1783
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 5 LEPGPD 10
LEPG D
Sbjct: 1778 LEPGED 1783
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 5 LEPGPD 10
LEPGPD
Sbjct: 409 LEPGPD 414
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 PGLEPGP 9
PG EP P
Sbjct: 2774 PGDEPSP 2780
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 3 PGLEPGPD 10
PG EP P+
Sbjct: 2781 PGDEPHPE 2788
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 4 GLEPGPD 10
GL PG D
Sbjct: 614 GLRPGED 620
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 525 DPRLEP 530
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 506 DPRLEP 511
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|CORE5_ADE05|CORE-CAPSID bridging protein|Human adenovirus C serotype 5
Query: 2 DPGLEP 7
+PGLEP
Sbjct: 192 EPGLEP 197
>sp|CORE5_ADE02|CORE-CAPSID bridging protein|Human adenovirus C serotype 2
Query: 2 DPGLEP 7
+PGLEP
Sbjct: 193 EPGLEP 198
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 DPGLEP 7
DP LEP
Sbjct: 522 DPRLEP 527
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 4 GLEPGPD 10
GL PG D
Sbjct: 614 GLRPGED 620
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 DPGLEP 7
DP LEP
Sbjct: 522 DPRLEP 527
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 4 GLEPGPD 10
GL PG D
Sbjct: 614 GLRPGED 620
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 DPGLEP 7
DP LEP
Sbjct: 2401 DPDLEP 2406
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 DPGLEP 7
DP LEP
Sbjct: 2405 DPDLEP 2410
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 DPGLEPGPD 10
DP GPD
Sbjct: 3 DPAAGSGPD 11
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 DPGLEPGPD 10
DP GPD
Sbjct: 3 DPAAGSGPD 11
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 DPGLEP 7
DP LEP
Sbjct: 529 DPRLEP 534
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 1 KDPGLEPGPD 10
KDP ++ GP
Sbjct: 1329 KDPRVQNGPS 1338
278|Sequence|1386|1395|EPGPDSPGGS
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 PGPDSPGGS 10
P PD PG S
Sbjct: 501 PSPDVPGKS 509
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 4 PDSPGGS 10
PDSPGGS
Sbjct: 204 PDSPGGS 210
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 4 PDSPGG 9
PDSPGG
Sbjct: 204 PDSPGG 209
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 3 GPDSPGG 9
G D+PGG
Sbjct: 271 GKDTPGG 277
>sp|GLYC_JUNIN|PRE-GLYCOPROTEIN polyprotein GP complex|Junin mammarenavirus (JUNV) (Junn
Query: 3 GPDSPGG 9
G D+PGG
Sbjct: 263 GKDTPGG 269
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSPGG 9
GPD P G
Sbjct: 713 GPDRPDG 719
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSPGG 9
GPD P G
Sbjct: 725 GPDRPDG 731
>sp|VE1_HPV23|REPLICATION protein E1|Human papillomavirus 23
Query: 2 PGPDSPGG 9
PGP + GG
Sbjct: 142 PGPAAQGG 149
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 3 GPDSPGG 9
GP SPGG
Sbjct: 7 GPASPGG 13
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 3 GPDSPGG 9
GP SPGG
Sbjct: 7 GPASPGG 13
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSPGG 9
GPD P G
Sbjct: 737 GPDRPEG 743
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 4 PDSPGG 9
PDSPGG
Sbjct: 204 PDSPGG 209
>sp|VE2_HPV20|REGULATORY protein E2|Human papillomavirus 20
Query: 4 PDSPGG 9
PDSPGG
Sbjct: 204 PDSPGG 209
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 3 GPDSPGGS 10
GP+S GG+
Sbjct: 353 GPNSDGGA 360
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 4 PDSPGG 9
P+SPGG
Sbjct: 204 PESPGG 209
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 GPDSPG 8
GP++PG
Sbjct: 2071 GPNNPG 2076
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 PGPDSPGGS 10
PGP +P G+
Sbjct: 155 PGPAAPSGA 163
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 PGPDSPGGS 10
PGP +P G+
Sbjct: 155 PGPAAPSGA 163
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 3 GPDSPGG 9
G D PGG
Sbjct: 274 GKDMPGG 280
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 4 PDSPG 8
PD+PG
Sbjct: 33 PDNPG 37
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PGPDSPGG 9
P PD GG
Sbjct: 411 PLPDGTGG 418
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PGPDSPGG 9
P PD GG
Sbjct: 411 PLPDGTGG 418
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 4 PDSPGGS 10
PD GGS
Sbjct: 141 PDDEGGS 147
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PGPDSPGGS 10
P P+ PG S
Sbjct: 442 PSPEVPGKS 450
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 4 PDSPGGS 10
PD GGS
Sbjct: 139 PDDEGGS 145
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 2 PGPDSPGG 9
P P +PGG
Sbjct: 165 PSPRNPGG 172
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GPDSP 7
GPD+P
Sbjct: 911 GPDTP 915
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 GPDSP 7
GPD+P
Sbjct: 912 GPDTP 916
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 PGPDSPGGS 10
PGP +P G+
Sbjct: 155 PGPAAPWGA 163
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 2 PGPDS 6
PGPD+
Sbjct: 576 PGPDN 580
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 4 PDSPGGS 10
PD GGS
Sbjct: 141 PDDEGGS 147
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 2 PGPDSPGG 9
P P SP G
Sbjct: 387 PAPGSPPG 394
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 733 GPDRP 737
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 717 GPDRP 721
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 726 GPDRP 730
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 702 GPDRP 706
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 726 GPDRP 730
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 722 GPDRP 726
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 717 GPDRP 721
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 735 GPDRP 739
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 725 GPDRP 729
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 713 GPDRP 717
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 727 GPDRP 731
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 724 GPDRP 728
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 726 GPDRP 730
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 731 GPDRP 735
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 718 GPDRP 722
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 726 GPDRP 730
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 726 GPDRP 730
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 738 GPDRP 742
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 731 GPDRP 735
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 722 GPDRP 726
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 723 GPDRP 727
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 721 GPDRP 725
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 726 GPDRP 730
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 721 GPDRP 725
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 GPDSP 7
GPD P
Sbjct: 715 GPDRP 719
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 PGPDSP 7
P PD+P
Sbjct: 454 PAPDNP 459
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 EPGPD 5
EPGPD
Sbjct: 410 EPGPD 414
>sp|NP1_HBOC3|NON-STRUCTURAL protein NP-1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 4 PDSPG 8
PD+PG
Sbjct: 101 PDAPG 105
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GPDSPGG 9
GP++P G
Sbjct: 74 GPETPWG 80
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GPDSPGG 9
GP++P G
Sbjct: 74 GPETPWG 80
279|Sequence|1391|1400|SPGGSSPPRR
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 PGGSSPPRR 10
PGGSSP R
Sbjct: 455 PGGSSPTDR 463
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 2 PGGSSPPRR 10
PGG+S PR+
Sbjct: 1128 PGGASKPRK 1136
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 2 PGGSSPPRR 10
PGG+S PR+
Sbjct: 1128 PGGASKPRK 1136
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 2 PGGSSPPRR 10
PGG+S PR+
Sbjct: 1128 PGGASKPRK 1136
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 2 PGGSSPPRR 10
PGG+S PR+
Sbjct: 1128 PGGASKPRK 1136
>sp|HBZ_HTL1C|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 PGGSSPPR 9
PGG +PPR
Sbjct: 66 PGGKAPPR 73
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 2 PGGSSPPRR 10
PGG+S PR+
Sbjct: 1133 PGGASKPRK 1141
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 2 PGGSSPPRR 10
PGG+S PR+
Sbjct: 1133 PGGASKPRK 1141
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 SPGGSSPPR 9
SP G++PP+
Sbjct: 465 SPPGANPPK 473
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SPGGSSPPR 9
SP G+ PP+
Sbjct: 465 SPPGADPPK 473
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 3 GGSSPPRR 10
G S+PPR+
Sbjct: 232 GVSAPPRK 239
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 SPGGSSPPRR 10
+P G+ PP++
Sbjct: 476 APPGADPPKK 485
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 SPGGSSPPRR 10
+P G+ PP++
Sbjct: 476 APPGADPPKK 485
>sp|UL87_HCMVA|PROTEIN UL87|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GGSSPPRR 10
GGS+ PRR
Sbjct: 18 GGSAMPRR 25
>sp|UL87_HCMVM|UNCHARACTERIZED protein UL87|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GGSSPPRR 10
GGS+ PRR
Sbjct: 18 GGSAMPRR 25
>sp|VE2_HPV42|REGULATORY protein E2|Human papillomavirus 42
Query: 2 PGGSSPPRR 10
P +SPPR+
Sbjct: 250 PIQTSPPRK 258
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 SPGGSSPPR 9
+PG + PP+
Sbjct: 347 APGAAGPPQ 355
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 4 GSSPPR 9
GS+PPR
Sbjct: 770 GSAPPR 775
Query: 1 SPGGSSPP 8
SP G+ PP
Sbjct: 474 SPPGAKPP 481
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 2 PGGSSPPRR 10
PGG + PRR
Sbjct: 600 PGGGNIPRR 608
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 4 GSSPPR 9
GS+PPR
Sbjct: 742 GSAPPR 747
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 SPGGSSPP 8
SP G+ PP
Sbjct: 475 SPPGAKPP 482
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 2 PGGSSPPR 9
PG + PP+
Sbjct: 348 PGAAGPPQ 355
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 2 PGGSSPPR 9
PG +PPR
Sbjct: 66 PGEKAPPR 73
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 PGGSSPPRR 10
PG PP R
Sbjct: 470 PGAGVPPDR 478
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 PGGSSPPR 9
PGG PR
Sbjct: 5 PGGPGKPR 12
>sp|TAX_HTL1F|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SPGGSSPP 8
SPGG PP
Sbjct: 336 SPGGLEPP 343
>sp|TAX_HTL1A|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 1 SPGGSSPP 8
SPGG PP
Sbjct: 336 SPGGLEPP 343
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 GGSSPP 8
GGS PP
Sbjct: 405 GGSWPP 410
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 GGSSPP 8
GGS PP
Sbjct: 405 GGSWPP 410
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 GGSSPP 8
GGS PP
Sbjct: 405 GGSWPP 410
>sp|NCAP_EBOZM|NUCLEOPROTEIN ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 PGGSSPPR 9
P GS+ PR
Sbjct: 553 PSGSTSPR 560
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 PGGSSPP 8
PGG PP
Sbjct: 559 PGGEVPP 565
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 PGGSSPP 8
PGG PP
Sbjct: 559 PGGDVPP 565
>sp|NCAP_EBOZ5|NUCLEOPROTEIN ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 PGGSSPPR 9
P GS+ PR
Sbjct: 553 PSGSTSPR 560
>sp|NCAP_EBOG4|NUCLEOPROTEIN ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 PGGSSPPR 9
P GS+ PR
Sbjct: 553 PSGSTSPR 560
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 PGGSSPPRR 10
P GS+P R
Sbjct: 1328 PAGSAPAYR 1336
Query: 4 GSSPPRR 10
GS+P RR
Sbjct: 67 GSAPARR 73
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPGGSSPPR 9
SP PPR
Sbjct: 757 SPAEQMPPR 765
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPGGSSPPR 9
SP PPR
Sbjct: 757 SPAEQMPPR 765
>sp|Y113_ADE07|UNCHARACTERIZED 11.3 kDa early protein|Human adenovirus B serotype 7
Query: 1 SPGGSSPPRR 10
SP SS PR+
Sbjct: 63 SPAASSHPRK 72
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 2 PGGSSPP 8
P GS PP
Sbjct: 210 PQGSCPP 216
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 4 GSSPPRR 10
GS+P RR
Sbjct: 65 GSAPARR 71
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 GGSSPPR 9
GS PPR
Sbjct: 107 AGSDPPR 113
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 4 GSSPPR 9
GS PPR
Sbjct: 108 GSDPPR 113
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 4 GSSPPRR 10
GS+P RR
Sbjct: 64 GSAPARR 70
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 GSSPPRR 10
GS+P RR
Sbjct: 65 GSAPARR 71
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 2 PGGSSPP 8
P GS PP
Sbjct: 334 PHGSPPP 340
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 SPGGSSPP 8
S GG+ PP
Sbjct: 413 STGGAHPP 420
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 4 GSSPPR 9
GS PPR
Sbjct: 108 GSDPPR 113
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 SPGGSSPP 8
S GG+ PP
Sbjct: 413 STGGAHPP 420
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 GSSPPRR 10
GS+P RR
Sbjct: 65 GSAPARR 71
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 SPGGSSPP 8
+P G+ PP
Sbjct: 475 APPGAQPP 482
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 2 PGGSSPP 8
P GS PP
Sbjct: 334 PHGSPPP 340
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 SPGGSSPP 8
+P G+ PP
Sbjct: 475 APPGAQPP 482
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 3 GGSSPP 8
GG+SPP
Sbjct: 37 GGASPP 42
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 GGSSPP 8
GSSPP
Sbjct: 269 AGSSPP 274
280|Sequence|1396|1405|SPPRRQWWRP
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 SPPRRQWW 8
+PP R WW
Sbjct: 868 TPPDR-WW 874
Query: 1 SPPRRQW 7
S PR QW
Sbjct: 3476 SEPRLQW 3482
>sp|UL09_HCMVA|UNCHARACTERIZED protein UL9|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 QWWRP 10
QWW+P
Sbjct: 22 QWWKP 26
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 3 PRRQW 7
PRR W
Sbjct: 179 PRRHW 183
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 SPPRRQWW 8
SPP W+
Sbjct: 43 SPPEMGWY 50
>sp|POLG_HCVH8|GENOME polyprotein|Hepatitis C virus (isolate HCT18)
Query: 3 PRRQW 7
PRR W
Sbjct: 179 PRRHW 183
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 3 PRRQW 7
PRR W
Sbjct: 179 PRRHW 183
>sp|VA54_VACCC|PROTEIN A54|Vaccinia virus (strain Copenhagen) (VACV)
Query: 6 QWWR 9
+WWR
Sbjct: 3 RWWR 6
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 3 PRRQWW 8
PR WW
Sbjct: 194 PRGTWW 199
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 3 PRRQW 7
PRR W
Sbjct: 167 PRRHW 171
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 SPPRRQWWR 9
+PPRR+ R
Sbjct: 1783 APPRRRLGR 1791
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 SPPRRQWWR 9
+PPRR+ R
Sbjct: 1784 APPRRRLGR 1792
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 655 PPKRVW 660
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 SPPRRQWWR 9
+PPRR+ R
Sbjct: 1783 APPRRRLGR 1791
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 655 PPKRVW 660
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 655 PPKRVW 660
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 3 PRRQWW 8
P+R++W
Sbjct: 419 PKRRYW 424
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 3 PRRQWW 8
P+R++W
Sbjct: 419 PKRRYW 424
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 654 PPKRVW 659
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 2 PPRRQWWRP 10
PP +W P
Sbjct: 75 PPEPEWTYP 83
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 6 QWWRP 10
QW RP
Sbjct: 1752 QWMRP 1756
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 6 QWWRP 10
QW RP
Sbjct: 1752 QWMRP 1756
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 6 QWWRP 10
QW RP
Sbjct: 1749 QWMRP 1753
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 6 QWWRP 10
QW RP
Sbjct: 1750 QWMRP 1754
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 6 QWWRP 10
QW RP
Sbjct: 1750 QWMRP 1754
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 6 QWWRP 10
QW RP
Sbjct: 1757 QWMRP 1761
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 6 QWWRP 10
QW RP
Sbjct: 1749 QWMRP 1753
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 667 PPQRYW 672
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 668 PPKRFW 673
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 668 PPKRFW 673
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 668 PPKRFW 673
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 2 PPRRQW 7
PP+R W
Sbjct: 668 PPKRFW 673
281|Sequence|1401|1410|QWWRPWLDHA
>sp|GH_HHV6Z|ENVELOPE glycoprotein H|Human herpesvirus 6B (strain Z29)
Query: 3 WRPW 6
WRPW
Sbjct: 17 WRPW 20
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 WRPWLDH 9
WRP L+H
Sbjct: 84 WRPLLEH 90
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLSH 302
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLSH 302
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLSH 302
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLSH 302
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLSH 302
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLSH 302
>sp|PG085_MCV1|PROBABLE metalloendopeptidase G1-type|Molluscum contagiosum virus subtype 1
Query: 5 PWLDH 9
PWL H
Sbjct: 298 PWLQH 302
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QWWRPWLD 8
QW WL+
Sbjct: 1691 QWQEAWLE 1698
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QWWRPWLD 8
QW WL+
Sbjct: 1691 QWQEAWLE 1698
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 QWWRPWL 7
QW+ P+L
Sbjct: 160 QWFEPFL 166
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 QWWRPWL 7
QW+ P+L
Sbjct: 160 QWFEPFL 166
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 QWWRPWL 7
QW+ P+L
Sbjct: 160 QWFEPFL 166
>sp|VP11_CTFVL|UNCHARACTERIZED protein VP11|Colorado tick fever virus (strain
Query: 3 WRPWL 7
WRPW+
Sbjct: 209 WRPWV 213
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 WWRPWLDH 9
+WR W+++
Sbjct: 707 FWRKWVEN 714
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 WWRPWLDH 9
+WR W+++
Sbjct: 711 FWRKWVEN 718
>sp|L_HRSVB|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus B
Query: 6 WLDH 9
WLDH
Sbjct: 2109 WLDH 2112
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 QWWRPWLDH 9
+W R +DH
Sbjct: 391 EWGREMVDH 399
>sp|E1BS_ADE12|E1B protein, small T-antigen|Human adenovirus A serotype 12
Query: 1 QWWRPWL 7
Q WR WL
Sbjct: 121 QLWRAWL 127
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 1 QWWRPWLDHA 10
QW+ ++HA
Sbjct: 210 QWYETEINHA 219
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WWRPWLDHA 10
W R +L HA
Sbjct: 344 WTRLFLSHA 352
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 3 WRPWLD 8
WR W D
Sbjct: 337 WRLWRD 342
>sp|UL142_HCMVM|MEMBRANE glycoprotein UL142|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 WWRPWLDH 9
W+ PW+ +
Sbjct: 78 WFTPWVQN 85
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QWWRPWLDHA 10
Q W+ W+ +A
Sbjct: 138 QLWKDWVTNA 147
282|Sequence|1406|1415|WLDHATVIHS
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 1 WLDHATVIHS 10
W++H+T H+
Sbjct: 449 WMNHSTNNHT 458
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 WLDHAT 6
WL HAT
Sbjct: 51 WLKHAT 56
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 WLDHAT 6
WL HAT
Sbjct: 51 WLKHAT 56
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 WLDHATVIH 9
WL HA + H
Sbjct: 32 WLLHALLAH 40
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 1 WLDHATVIH 9
WL HA + H
Sbjct: 32 WLLHALLAH 40
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 WLDHA 5
WL+HA
Sbjct: 1681 WLEHA 1685
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 WLDHA 5
WL+HA
Sbjct: 1711 WLEHA 1715
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 LDHATVIH 9
DH VIH
Sbjct: 979 FDHKVVIH 986
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 LDHATVIH 9
DH VIH
Sbjct: 979 FDHKVVIH 986
>sp|VE1_HPV33|REPLICATION protein E1|Human papillomavirus 33
Query: 1 WLDHATVIH 9
W+D TV+
Sbjct: 332 WIDRLTVLQ 340
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 1 WLDHATVIH 9
W+D TV+
Sbjct: 332 WIDRLTVLQ 340
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LDHATVIH 9
L HA V+H
Sbjct: 1141 LPHALVLH 1148
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LDHATVIH 9
L HA V+H
Sbjct: 1141 LPHALVLH 1148
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 LDHATVIH 9
L HA V+H
Sbjct: 1141 LPHALVLH 1148
>sp|VE1_HPV14|REPLICATION protein E1|Human papillomavirus 14
Query: 1 WLDHATVI 8
W+ H T++
Sbjct: 294 WMAHQTIV 301
283|Sequence|1411|1420|TVIHSGDYFL
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 TVIHSGDYF 9
TV+ GDYF
Sbjct: 1735 TVLKEGDYF 1743
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 TVIHSGDYF 9
TV+ GDYF
Sbjct: 1735 TVLTEGDYF 1743
>sp|VL2_HPV09|MINOR capsid protein L2|Human papillomavirus 9
Query: 2 VIH----SGDYFL 10
VIH SGDY+L
Sbjct: 507 VIHINDTSGDYYL 519
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 3 IHSGDYFL 10
I GDYFL
Sbjct: 439 IDGGDYFL 446
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 3 IHSGDYF 9
I +GDYF
Sbjct: 949 IQNGDYF 955
>sp|P100_HHV7J|LARGE structural phosphoprotein|Human herpesvirus 7 (strain JI)
Query: 1 TVIHSGDY 8
TV H+ DY
Sbjct: 139 TVTHAADY 146
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 4 HSGDYFL 10
+SGD+FL
Sbjct: 498 NSGDFFL 504
>sp|VL1_HPV63|MAJOR capsid protein L1|Human papillomavirus type 63
Query: 1 TVIHSGDYF 9
TVI GD F
Sbjct: 194 TVIEDGDMF 202
>sp|VL1_HPV37|MAJOR capsid protein L1|Human papillomavirus 37
Query: 1 TVIHSGDYF 9
TVI GD F
Sbjct: 194 TVIEDGDMF 202
>sp|VL1_HPV15|MAJOR capsid protein L1|Human papillomavirus 15
Query: 1 TVIHSGDYF 9
TVI GD F
Sbjct: 194 TVIEDGDMF 202
>sp|VL1_HPV09|MAJOR capsid protein L1|Human papillomavirus 9
Query: 1 TVIHSGDYF 9
TVI GD F
Sbjct: 194 TVIEDGDMF 202
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 6 GDYFL 10
GDYFL
Sbjct: 29 GDYFL 33
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 3 IHSGDYFL 10
I GDY+L
Sbjct: 436 IFGGDYYL 443
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 3 IHSGDYFL 10
I GDY+L
Sbjct: 432 IFGGDYYL 439
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 4 HSGDYF 9
H+GDY
Sbjct: 424 HTGDYL 429
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 4 HSGDYF 9
H+GDY
Sbjct: 427 HTGDYL 432
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 4 HSGDYF 9
H+GDY
Sbjct: 427 HTGDYL 432
>sp|VL2_HPV51|MINOR capsid protein L2|Human papillomavirus 51
Query: 2 VIHSGDYFL 10
VI GDY+L
Sbjct: 435 VILGGDYYL 443
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 2 VIHSGDYFL 10
+IH DY+L
Sbjct: 438 LIHGTDYYL 446
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 TVIHSGDYFL 10
TV H+G Y L
Sbjct: 497 TVAHTGPYDL 506
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 4 HSGDY 8
H+GDY
Sbjct: 426 HTGDY 430
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 HSGDY 8
H+GDY
Sbjct: 426 HTGDY 430
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 HSGDY 8
H+GDY
Sbjct: 426 HTGDY 430
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 HSGDY 8
H+GDY
Sbjct: 426 HTGDY 430
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 HSGDY 8
H+GDY
Sbjct: 426 HTGDY 430
>sp|DPOL_EBVG|DNA polymerase catalytic subunit|Epstein-Barr virus (strain GD1)
Query: 4 HSGDY 8
H+GDY
Sbjct: 198 HAGDY 202
>sp|DPOL_EBVB9|DNA polymerase catalytic subunit|Epstein-Barr virus (strain B95-8)
Query: 4 HSGDY 8
H+GDY
Sbjct: 198 HAGDY 202
>sp|DPOL_EBVA8|DNA polymerase catalytic subunit|Epstein-Barr virus (strain AG876)
Query: 4 HSGDY 8
H+GDY
Sbjct: 198 HAGDY 202
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 2 VIHSGDYFL 10
V H+G YF+
Sbjct: 153 VNHTGIYFM 161
>sp|VE2_HPV21|REGULATORY protein E2|Human papillomavirus 21
Query: 2 VIHSGDYFL 10
V H+G YF+
Sbjct: 153 VNHTGIYFM 161
>sp|POLG_LIVSB|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/SB
Query: 4 HSGDY 8
H+GDY
Sbjct: 146 HTGDY 150
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 2 VIH----SGDYFL 10
VIH SGD++L
Sbjct: 492 VIHTHDNSGDFYL 504
>sp|POLG_LIV31|GENOME polyprotein|Louping ill virus (isolate Sheep/Scotland/31/1931)
Query: 4 HSGDY 8
H+GDY
Sbjct: 146 HTGDY 150
>sp|POLG_LIVNO|GENOME polyprotein|Louping ill virus (isolate Sheep
Query: 4 HSGDY 8
H+GDY
Sbjct: 146 HTGDY 150
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 TVIHSGD 7
T+I SGD
Sbjct: 61 TIIESGD 67
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 TVIHSGD 7
T+I SGD
Sbjct: 61 TIIESGD 67
>sp|VP7_ROTGI|OUTER capsid glycoprotein VP7|Rotavirus B (isolate RVB/Rat/United
Query: 2 VIHSGDYF 9
V HS D+F
Sbjct: 175 VFHSNDHF 182
>sp|VE2_HPV19|REGULATORY protein E2|Human papillomavirus 19
Query: 2 VIHSGDYFL 10
V H+G YF+
Sbjct: 153 VNHTGLYFM 161
>sp|POLG_LIVN1|GENOME polyprotein|Louping ill virus (strain Negishi
Query: 4 HSGDY 8
H+GDY
Sbjct: 146 HTGDY 150
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 HSGDYFL 10
SGDY L
Sbjct: 278 QSGDYLL 284
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 HSGDYFL 10
SGDY L
Sbjct: 278 QSGDYLL 284
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 3 IHSGDY 8
IH GD+
Sbjct: 900 IHEGDF 905
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 3 IHSGDY 8
IH GD+
Sbjct: 907 IHEGDF 912
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 1 TVIHSGDY 8
TVI + DY
Sbjct: 94 TVIQNNDY 101
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 3 IHSGDYFL 10
I GDY+L
Sbjct: 433 IVGGDYYL 440
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 TVIHSGDY 8
TVI + DY
Sbjct: 94 TVIQNNDY 101
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 TVIHSGDYFL 10
T++H+G ++
Sbjct: 436 TIVHAGKIYI 445
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 4 HSGDYFL 10
+SGD++L
Sbjct: 498 NSGDFYL 504
>sp|VL2_HPV26|MINOR capsid protein L2|Human papillomavirus type 26
Query: 2 VIHSGDYFL 10
V+H +Y+L
Sbjct: 439 VVHGDNYYL 447
284|Sequence|1416|1425|GDYFLFESDS
>sp|VL2_HPV29|MINOR capsid protein L2|Human papillomavirus 29
Query: 1 GDYFLF 6
GDYFL+
Sbjct: 442 GDYFLW 447
>sp|VL2_HPV62|MINOR capsid protein L2|Human papillomavirus 62
Query: 2 DYFLFES 8
DY+LF S
Sbjct: 446 DYYLFPS 452
>sp|NSS_UUKS|NON-STRUCTURAL protein NS-S|Uukuniemi virus (strain S23) (UUKV)
Query: 4 FLFESD 9
F+FESD
Sbjct: 226 FMFESD 231
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 DYFLFESDS 10
DY L +SDS
Sbjct: 134 DYLLGDSDS 142
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DYFLFESDS 10
DY L +SDS
Sbjct: 134 DYLLGDSDS 142
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 DYFLFESDS 10
DY L +SDS
Sbjct: 134 DYLLGDSDS 142
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 DYFLFESDS 10
DY L +SDS
Sbjct: 134 DYLLGDSDS 142
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 1 GDYFLFESD 9
GD+ L E+D
Sbjct: 16 GDWCLLEAD 24
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 DYFLFESDS 10
DY L +SDS
Sbjct: 134 DYLLGDSDS 142
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 GDYFLFESD 9
G +LFE D
Sbjct: 143 GQKYLFEGD 151
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 1 GDYFLF 6
GD+FLF
Sbjct: 32 GDWFLF 37
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 GDYFLFESD 9
GD+ L E D
Sbjct: 1450 GDFSLVEED 1458
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 GDYFLFESD 9
GD+ L E D
Sbjct: 1454 GDFSLVEDD 1462
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 GDYFLFESD 9
GD+ L E D
Sbjct: 1454 GDFSLVEDD 1462
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 1 GDYFLFESD 9
GD+ L E+D
Sbjct: 16 GDWCLLEAD 24
>sp|NSP5_ROTH5|NON-STRUCTURAL protein 5|Rotavirus A (strain
Query: 2 DYFLFESDS 10
DY L +SDS
Sbjct: 160 DYILDDSDS 168
285|Sequence|1421|1430|FESDSEEEEE
>sp|ICP0_HHV2H|E3 ubiquitin-protein ligase ICP0|Human herpesvirus 2 (strain HG52)
Query: 3 SDSEEEEE 10
SDSEEE E
Sbjct: 45 SDSEEETE 52
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 FESDSEEEEE 10
F DS+EE+E
Sbjct: 1034 FHDDSKEEDE 1043
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 FESDSEEEEE 10
F DS+EE+E
Sbjct: 1034 FHDDSKEEDE 1043
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 FESDSEEEEE 10
F DS+EE+E
Sbjct: 1034 FHDDSKEEDE 1043
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 FESDSEEEEE 10
E+D EE+E+
Sbjct: 754 LETDPEEQEQ 763
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 FESDSEEEEE 10
E+D++E+E+
Sbjct: 754 LETDADEQEQ 763
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 FESDSEEEEE 10
E+D++E+E+
Sbjct: 754 LETDADEQEQ 763
>sp|SCAF_HHV6U|CAPSID scaffolding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FESDSEEE 8
F+SDSE+E
Sbjct: 398 FQSDSEDE 405
>sp|SCAF_HHV6Z|CAPSID scaffolding protein|Human herpesvirus 6B (strain Z29)
Query: 1 FESDSEEE 8
F+SDSE+E
Sbjct: 398 FQSDSEDE 405
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 ESDSEEEEE 10
E D E+E+E
Sbjct: 3044 EEDLEDEQE 3052
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 FESDSEEEE 9
+E+DS E+E
Sbjct: 678 YETDSLEDE 686
>sp|VPU_HV1AN|PROTEIN Vpu|Human immunodeficiency virus type 1
Query: 1 FESDSEEEEE 10
+ES+ EEE+E
Sbjct: 59 YESNGEEEQE 68
>sp|ICP27_HHV2H|MRNA export factor|Human herpesvirus 2 (strain HG52)
Query: 3 SDSEEEEE 10
SDSE EE+
Sbjct: 16 SDSELEED 23
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 FESDSEEEEE 10
F+SDS+ E E
Sbjct: 334 FQSDSQVEGE 343
286|Sequence|1426|1435|EEEEEAVPED
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 EEEEEAVPE 9
E EEE VPE
Sbjct: 1672 EREEEPVPE 1680
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 EEEEEAVPE 9
++EEE +PE
Sbjct: 683 KDEEEEIPE 691
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 EEEEEAVPE 9
E +EE PE
Sbjct: 1666 ERQEEETPE 1674
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EEEEEAVPE 9
+ +EE VPE
Sbjct: 1673 DRQEEPVPE 1681
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 EEEEEAVPE 9
E++EE VP+
Sbjct: 1667 EKKEEEVPQ 1675
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EEEEEAVPE 9
+ +EE VPE
Sbjct: 1673 DRQEEPVPE 1681
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EEEEEAVPE 9
+ +EE VPE
Sbjct: 1673 DRQEEPVPE 1681
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EEEEEAVPED 10
+EE PED
Sbjct: 870 DEEAPTTPED 879
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 EEEAVPED 10
E+E PED
Sbjct: 3535 EDEFTPED 3542
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 EEEAVPED 10
E+E PED
Sbjct: 3535 EDEFTPED 3542
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 1 EEEEEAV 7
EEE EAV
Sbjct: 1048 EEENEAV 1054
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 EEEEEAVPE 9
E +EE PE
Sbjct: 1666 ERQEEEAPE 1674
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 5 EAVPED 10
EAVP+D
Sbjct: 295 EAVPDD 300
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 5 EAVPED 10
EAVP+D
Sbjct: 269 EAVPDD 274
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EEEEEAVPE 9
++EE +PE
Sbjct: 1809 QDEERDIPE 1817
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EEEEEAVPE 9
++EE +PE
Sbjct: 1808 QDEERDIPE 1816
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EEEEEAVPE 9
++EE +PE
Sbjct: 1809 QDEERDIPE 1817
287|Sequence|1431|1440|AVPEDPRPSA
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 AVPEDPRP 8
A+P DPRP
Sbjct: 279 AIPHDPRP 286
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 VPEDPRPSA 10
+P++ RPSA
Sbjct: 146 IPQNQRPSA 154
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 VPEDPRPS 9
+PED +PS
Sbjct: 654 IPEDIKPS 661
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 4 EDPRPSA 10
+DPRPS
Sbjct: 1315 KDPRPSG 1321
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPSDPSP 80
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 2 VPEDPRP 8
+PE+PRP
Sbjct: 198 MPENPRP 204
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 AVPEDPRP 8
VP DP P
Sbjct: 74 GVPTDPNP 81
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 2 VPEDPRP 8
+PE+PRP
Sbjct: 198 MPENPRP 204
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 VPEDPRPSA 10
+PEDP+ A
Sbjct: 805 IPEDPKTMA 813
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 66 VPTDPNP 72
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 64 VPTDPNP 70
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 71 VPTDPNP 77
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 71 VPTDPNP 77
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 76 VPTDPNP 82
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 76 VPTDPNP 82
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 80 VPTDPNP 86
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPNP 81
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPNP 80
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 71 VPTDPNP 77
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 VPEDPRPSA 10
+PED PSA
Sbjct: 73 LPEDNEPSA 81
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 71 VPTDPSP 77
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPSP 80
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 74 VPTDPSP 80
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 2 VPEDPRPSA 10
+PED PSA
Sbjct: 73 LPEDNEPSA 81
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 VPEDPRPSA 10
+PED PSA
Sbjct: 73 LPEDNEPSA 81
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 2 VPEDPRPSA 10
+PED PSA
Sbjct: 73 LPEDNEPSA 81
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 VPEDPRP 8
VP DP P
Sbjct: 75 VPTDPTP 81
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 AVPEDP 6
++PEDP
Sbjct: 625 SIPEDP 630
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 VPEDPRPSA 10
VP P P+A
Sbjct: 1915 VPNQPYPNA 1923
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 VPEDPRPSA 10
VP P P+A
Sbjct: 1915 VPNQPYPNA 1923
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AVPEDP 6
++PEDP
Sbjct: 625 SIPEDP 630
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 AVPEDPR 7
+VPE PR
Sbjct: 904 SVPESPR 910
>sp|UL95_EBVB9|LATE gene expression regulator BGLF3|Epstein-Barr virus (strain B95-8)
Query: 2 VPEDPRP 8
VPEDP P
Sbjct: 156 VPEDPLP 162
>sp|GD_HHV2H|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain HG52)
Query: 2 VPEDPRPSA 10
VPEDP SA
Sbjct: 294 VPEDPEDSA 302
>sp|GD_HHV23|ENVELOPE glycoprotein D|Human herpesvirus 2 (strain 333)
Query: 2 VPEDPRPSA 10
VPEDP SA
Sbjct: 294 VPEDPEDSA 302
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 2 VPEDPRP 8
+PE+P+P
Sbjct: 198 MPENPKP 204
>sp|RDRP_I01A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I60A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Ann
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I68A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I01A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I36A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDHEPSG 81
>sp|RDRP_I67A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I000X|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/X-31
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I75A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I57A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I57A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I05A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I03A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I57A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I56A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I06A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I02A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I02A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VPEDPRPSA 10
+P DP PS
Sbjct: 445 LPRDPSPSG 453
>sp|RDRP_I47A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Fort
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I35A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I34A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I33A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I03A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I02A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I93A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I88A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I83A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I80A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I77A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I76A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I57A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I57A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I45A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I01A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I01A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I00A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I82A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I78A8|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I78A7|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I54A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I80A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 2 VPEDPRPSA 10
VPE P+P A
Sbjct: 169 VPEGPQPVA 177
>sp|RDRP_I18A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I85A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I71A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I68A6|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I07A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I79A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I78A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I75A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I73A5|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Port
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I73A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I72A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I72A3|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I72A2|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I70A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I69A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I68A4|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I59A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I51A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I43A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|RDRP_I40A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PEDPRPSA 10
PE P P A
Sbjct: 25 PEQPAPPA 32
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PEDPRPSA 10
PE P P A
Sbjct: 25 PEQPAPPA 32
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PEDPRPSA 10
PE P P A
Sbjct: 25 PEQPAPPA 32
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 AVPEDPRP 8
++PE P+P
Sbjct: 682 SLPEIPKP 689
>sp|RDRP_I96A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 VPEDPRPSA 10
+PED PS
Sbjct: 73 LPEDNEPSG 81
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 AVPEDPR 7
PEDPR
Sbjct: 875 TTPEDPR 881
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 AVPEDPRP 8
A+P PRP
Sbjct: 276 AIPHAPRP 283
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 PEDPRPSA 10
PE P P A
Sbjct: 1457 PETPAPDA 1464
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 2 VPEDPRPSA 10
+P DP P+
Sbjct: 445 LPRDPSPAG 453
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 VPEDPRPSA 10
+P++PR +A
Sbjct: 575 IPDNPRAAA 583
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 VPEDPRPSA 10
+P++PR +A
Sbjct: 575 IPDNPRAAA 583
>sp|E3B14_ADE12|EARLY E3B 12.7 kDa protein|Human adenovirus A serotype 12
Query: 3 PEDPRPSA 10
PE PRP +
Sbjct: 91 PEPPRPPS 98
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 1 AVPEDPR 7
A+P DPR
Sbjct: 672 ALPRDPR 678
288|Sequence|1436|1445|PRPSAQSAFQ
***** No hits found ******
289|Sequence|1441|1450|QSAFQLAYQA
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 SAFQLAY 8
SAF LAY
Sbjct: 415 SAFHLAY 421
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 SAFQLAYQ 9
+ FQL YQ
Sbjct: 547 TEFQLVYQ 554
290|Sequence|1446|1455|LAYQAWVTNA
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YQAWVTNA 10
YQ WV+ A
Sbjct: 364 YQMWVSGA 371
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YQAWVTNA 10
YQ WV+ A
Sbjct: 363 YQMWVSGA 370
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 LAYQAWVTNA 10
+A++AW +NA
Sbjct: 390 VAFRAWQSNA 399
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 YQAWVTNA 10
Y AWV A
Sbjct: 192 YNAWVQKA 199
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 2 AYQAWVTNA 10
A+ W+TNA
Sbjct: 263 AHIQWLTNA 271
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 2 AYQAWVTNA 10
A+ W+TNA
Sbjct: 263 AHIQWLTNA 271
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 2 AYQAWVTNA 10
A+ W+TNA
Sbjct: 263 AHIQWLTNA 271
>sp|GB_HSV2S|ENVELOPE glycoprotein B|Herpes simplex virus type 2
Query: 1 LAYQAWVTNA 10
+AYQ ++NA
Sbjct: 431 IAYQPLLSNA 440
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 AYQAW 6
AY+AW
Sbjct: 167 AYRAW 171
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 6 WVTNA 10
WVTN+
Sbjct: 131 WVTNS 135
>sp|UL20_HCMVA|UNCHARACTERIZED protein UL20|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YQAWVTNA 10
++ WVTNA
Sbjct: 140 WKDWVTNA 147
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 YQAWVTN 9
++ W+TN
Sbjct: 631 HEEWITN 637
291|Sequence|1451|1460|WVTNAQAVLR
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 WVTNAQAVLR 10
W T+ +AVLR
Sbjct: 661 WHTDVRAVLR 670
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 3 TNAQAVLR 10
TNA A+LR
Sbjct: 334 TNATAILR 341
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 2 VTNAQAV 8
V+NAQAV
Sbjct: 57 VSNAQAV 63
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 2 VTNAQAVLR 10
VTN + VLR
Sbjct: 631 VTNKEEVLR 639
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 WVTNAQAVLR 10
WV+ VLR
Sbjct: 816 WVSKGTPVLR 825
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 WVTNAQAVLR 10
WV+ VLR
Sbjct: 816 WVSKGTPVLR 825
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 WVTNAQAVL 9
W T QAV+
Sbjct: 1116 WHTGKQAVI 1124
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 WVTNAQAVL 9
W+ NA+ L
Sbjct: 1546 WIVNAEGDL 1554
292|Sequence|1456|1465|QAVLRRRQQE
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 QAVLRRRQ 8
+ VLRRRQ
Sbjct: 1148 EVVLRRRQ 1155
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 QAVLRRRQ 8
+ VLR+RQ
Sbjct: 1148 EVVLRKRQ 1155
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 AVLRRRQQE 10
AVLRRR+++
Sbjct: 425 AVLRRRRRD 433
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AVLRRRQQE 10
AVLRRR+++
Sbjct: 425 AVLRRRRRD 433
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 AVLRRRQQE 10
AVLRRR+++
Sbjct: 425 AVLRRRRRD 433
293|Sequence|1461|1470|RRQQEQEQAR
>sp|PG052_VACCC|PROTEIN OPG052|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRQQEQEQAR 10
R QQEQEQ R
Sbjct: 12 RPQQEQEQPR 21
>sp|PG052_VACCP|PROTEIN OPG052|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 RRQQEQEQAR 10
R QQEQEQ R
Sbjct: 12 RLQQEQEQPR 21
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 RRQQEQEQA 9
RRQ E+E+A
Sbjct: 157 RRQFERERA 165
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 RRQQEQEQA 9
RRQ E+E+A
Sbjct: 157 RRQFERERA 165
>sp|PG052_VAR67|PROTEIN OPG052|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 RRQQEQEQAR 10
R QQEQEQ R
Sbjct: 12 RPQQEQEQHR 21
294|Sequence|1466|1475|QEQARQEQAG
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 RQEQAG 10
RQE+AG
Sbjct: 353 RQEEAG 358
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RQEQAG 10
RQE+AG
Sbjct: 353 RQEEAG 358
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 RQEQAG 10
RQE+AG
Sbjct: 354 RQEEAG 359
295|Sequence|1471|1480|QEQAGQLPTG
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1642 GQLPTG 1647
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1631 GQLPTG 1636
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 5 GQLPTG 10
GQLPTG
Sbjct: 1631 GQLPTG 1636
>sp|PAX_I36A0|PROTEIN PA-X|Influenza A virus (strain A/Henry/1936
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCASLPT 216
>sp|PAX_I35A3|PROTEIN PA-X|Influenza A virus (strain A/USA:Phila/1935
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCASLPT 216
>sp|PAX_I34A1|PROTEIN PA-X|Influenza A virus (strain A/Puerto
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCASLPT 216
>sp|PAX_I33A0|PROTEIN PA-X|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCASLPT 216
>sp|PAX_I06A0|PROTEIN PA-X|Influenza A virus (strain A/Russia:St.Petersburg/8/2006
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCASLPT 216
>sp|PAX_I000X|PROTEIN PA-X|Influenza A virus (strain A/X-31
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCASLPT 216
>sp|PAX_I71A1|PROTEIN PA-X|Influenza A virus (strain A/Memphis/1/1971
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCAGLPT 216
>sp|PAX_I70A0|PROTEIN PA-X|Influenza A virus (strain A/Qu/7/1970
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCAGLPT 216
>sp|PAX_I69A0|PROTEIN PA-X|Influenza A virus (strain A/England/878/1969
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCAGLPT 216
>sp|PAX_I18A0|PROTEIN PA-X|Influenza A virus (strain A/Brevig
Query: 1 QEQAGQLPT 9
QEQ LPT
Sbjct: 208 QEQCAGLPT 216
>sp|VME1_CVHNL|MEMBRANE protein|Human coronavirus NL63 (HCoV-NL63)
Query: 3 QAGQLP 8
Q GQLP
Sbjct: 161 QVGQLP 166
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 QEQAGQL 7
Q+QAG+L
Sbjct: 472 QQQAGRL 478
296|Sequence|1476|1485|QLPTGGGPSQ
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QLPTGGGPSQ 10
LPT GGP +
Sbjct: 720 HLPTPGGPDR 729
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 PTGGGPSQ 10
P+GG P++
Sbjct: 777 PSGGAPTR 784
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 1 QLPTGGG 7
QLP+G G
Sbjct: 494 QLPSGNG 500
Query: 1 QLPTGGGP 8
Q+PT G P
Sbjct: 84 QIPTYGTP 91
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 1 QLPTGGG 7
QLP+G G
Sbjct: 494 QLPSGNG 500
Query: 1 QLPTGGGP 8
Q+PT G P
Sbjct: 84 QIPTYGTP 91
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QLPTGGGPSQ 10
LP GGP +
Sbjct: 718 HLPNRGGPDR 727
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 PTGGG 7
PTGGG
Sbjct: 411 PTGGG 415
>sp|GE_HHV11|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain 17)
Query: 3 PTGGGPSQ 10
PTG GP+Q
Sbjct: 44 PTGRGPTQ 51
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 3 PTGGGPSQ 10
PTG GP+Q
Sbjct: 44 PTGRGPTQ 51
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 1 QLPTGGGP 8
+LP GG P
Sbjct: 387 RLPVGGWP 394
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 PTGGG 7
PTGGG
Sbjct: 411 PTGGG 415
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 PTGGG 7
PTGGG
Sbjct: 411 PTGGG 415
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 QLPTGGGP 8
Q+PT G P
Sbjct: 84 QIPTYGTP 91
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 1 QLPTGGGP 8
Q+PT G P
Sbjct: 84 QIPTYGTP 91
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 3 PTGGGP 8
PT GGP
Sbjct: 59 PTSGGP 64
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 LPTGGGPSQ 10
+PT GP+Q
Sbjct: 150 IPTPKGPNQ 158
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1632 QLPTGA 1637
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1632 QLPTGA 1637
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QLPTGGGPSQ 10
+LPT GP +
Sbjct: 719 RLPTQRGPDR 728
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 QLPTGG 6
QLPTG
Sbjct: 1643 QLPTGA 1648
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 LPTGGGPS 9
LPT GP+
Sbjct: 772 LPTSAGPA 779
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 LPTGGGPS 9
P GG PS
Sbjct: 632 FPPGGAPS 639
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 LPTGGGPS 9
P GG PS
Sbjct: 632 FPPGGAPS 639
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 LPTGGGPS 9
LPT GP+
Sbjct: 772 LPTSAGPA 779
297|Sequence|1481|1490|GGPSQEVEPA
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 GGPSQEVE 8
GGPSQEV+
Sbjct: 1168 GGPSQEVD 1175
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 GGPSQEVE 8
GGPSQEV+
Sbjct: 1168 GGPSQEVD 1175
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 GGPSQEVE 8
GGPSQEV+
Sbjct: 1168 GGPSQEVD 1175
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 GGPSQEVE 8
G PSQEV+
Sbjct: 1168 GSPSQEVD 1175
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 1 GGPSQEVE 8
G P+QEVE
Sbjct: 254 GTPAQEVE 261
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 1 GGPSQEVE 8
G P+QEVE
Sbjct: 254 GTPAQEVE 261
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 GGPSQEVE 8
G P+QEVE
Sbjct: 254 GTPAQEVE 261
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 1 GGPSQEVE 8
G P+QE+E
Sbjct: 254 GTPAQEIE 261
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 PSQEVEPA 10
P+Q V+PA
Sbjct: 2461 PAQPVQPA 2468
Query: 3 PSQEVEPA 10
P+Q V+PA
Sbjct: 2470 PAQPVQPA 2477
Query: 3 PSQEVEPA 10
P+Q +EP
Sbjct: 2476 PAQPIEPG 2483
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 1 GGPSQEVE 8
G P+QE+E
Sbjct: 254 GTPAQEIE 261
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 2 GPSQEVEPA 10
G S+E +PA
Sbjct: 18 GASEEAKPA 26
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 2 GPSQEVEPA 10
G S+E +PA
Sbjct: 18 GASEEAKPA 26
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 GGPSQEVE 8
G P+ E+E
Sbjct: 173 GAPTMEIE 180
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GPSQEVEPA 10
GP++ EPA
Sbjct: 139 GPTKVFEPA 147
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GPSQEVEPA 10
GP++ EPA
Sbjct: 139 GPTKVFEPA 147
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 GGPSQEVEPA 10
G P E EPA
Sbjct: 2400 GDPDLEFEPA 2409
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 PSQEVEPA 10
P+Q +EP
Sbjct: 2476 PAQPIEPG 2483
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GPSQEVEPA 10
GP++ EPA
Sbjct: 139 GPTKVFEPA 147
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 1 GGPSQEVE 8
G P+QE+E
Sbjct: 254 GTPAQEME 261
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 1 GGPSQEVE 8
G P+QE E
Sbjct: 211 GTPAQEAE 218
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 GGPSQEVEP 9
GG S VEP
Sbjct: 653 GGQSANVEP 661
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 GGPSQEVEP 9
GG S VEP
Sbjct: 653 GGQSANVEP 661
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 GGPSQEVEP 9
GG S VEP
Sbjct: 653 GGQSANVEP 661
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PSQEVEPA 10
PS+ VEPA
Sbjct: 459 PSEPVEPA 466
298|Sequence|1486|1495|EVEPAEGPEE
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 5 AEGPEE 10
A+GPEE
Sbjct: 1513 AQGPEE 1518
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 2 VEPAEGPEE 10
V+P GP++
Sbjct: 932 VKPGSGPDD 940
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 5 AEGPEE 10
A+GPEE
Sbjct: 1513 AQGPEE 1518
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 5 AEGPEE 10
A+GPEE
Sbjct: 1509 AQGPEE 1514
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 3 EPAEGP 8
EPAE P
Sbjct: 460 EPAEDP 465
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 EVEPAEGPEE 10
EV P + PE+
Sbjct: 1097 EVRPMKTPEK 1106
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 VEPAEGP 8
+EP GP
Sbjct: 1548 IEPIHGP 1554
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 VEPAEGP 8
+EP GP
Sbjct: 1548 IEPIHGP 1554
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 VEPAEGP 8
+EP GP
Sbjct: 1548 IEPIHGP 1554
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 EPAEGPEE 10
EP GP E
Sbjct: 182 EPQVGPSE 189
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 1 EVEPAEGPE 9
+ EP EGP+
Sbjct: 32 QFEPTEGPD 40
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EVEPAEGP 8
++ PA GP
Sbjct: 643 DITPAHGP 650
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EVEPAEGP 8
++ PA GP
Sbjct: 643 DITPAHGP 650
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 4 PAEGPEE 10
PAEGP +
Sbjct: 1446 PAEGPAD 1452
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 VEPAEGP 8
V P EGP
Sbjct: 1912 VGPGEGP 1918
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 EPAEGPE 9
PAEGP+
Sbjct: 803 RPAEGPD 809
299|Sequence|1491|1500|EGPEEAAAGR
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PEEAAAGR 10
PEEAA R
Sbjct: 139 PEEAAPHR 146
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EGPEEAA 7
+GP+EAA
Sbjct: 279 KGPQEAA 285
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 PEEAAAGR 10
P EAAA R
Sbjct: 14 PHEAAAAR 21
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PEEAAAGR 10
P EAAA R
Sbjct: 14 PHEAAAAR 21
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 2 GPEEAAAGR 10
GP ++ AGR
Sbjct: 381 GPSDSGAGR 389
300|Sequence|1496|1505|AAAGRSHVVQ
***** No hits found ******
301|Sequence|1501|1510|SHVVQRVLST
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 SHVVQRVLST 10
+H++ ++LST
Sbjct: 256 AHLINKLLST 265
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SHVVQRVLST 10
+H++ ++LST
Sbjct: 282 AHLINKLLST 291
>sp|NS1_I97A1|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Hong
Query: 2 HVVQRVL 8
H+V+R+L
Sbjct: 63 HIVERIL 69
>sp|NS1_I97A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Chicken/Hong
Query: 2 HVVQRVL 8
H+V+R+L
Sbjct: 63 HIVERIL 69
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SHVVQRV 7
+HVVQ++
Sbjct: 979 AHVVQKI 985
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SHVVQRV 7
+HVVQ++
Sbjct: 979 AHVVQKI 985
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SHVVQRV 7
+HVVQ++
Sbjct: 977 AHVVQKI 983
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 SHVVQRV 7
+HVVQ++
Sbjct: 978 AHVVQKI 984
>sp|NCAP_INBSI|NUCLEOPROTEIN B virus (strain B/Singapore/222/1979)
Query: 1 SHVVQRVL 8
+H V+R+L
Sbjct: 111 AHAVERIL 118
>sp|NCAP_INBP9|NUCLEOPROTEIN B virus (strain B/Panama/45/1990)
Query: 1 SHVVQRVL 8
+H V+R+L
Sbjct: 111 AHAVERIL 118
>sp|NCAP_INBAD|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 SHVVQRVL 8
+H V+R+L
Sbjct: 111 AHAVERIL 118
>sp|NCAP_INBAA|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 SHVVQRVL 8
+H V+R+L
Sbjct: 111 AHAVERIL 118
302|Sequence|1506|1515|RVLSTAQFLW
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 LSTAQFLW 10
LSTAQ LW
Sbjct: 1274 LSTAQNLW 1281
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 LSTAQFLW 10
LSTAQ LW
Sbjct: 1273 LSTAQNLW 1280
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 LSTAQFLW 10
LSTAQ LW
Sbjct: 1273 LSTAQNLW 1280
>sp|IR08_HCMVA|UNCHARACTERIZED protein IRL8|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RVLSTAQFLW 10
R LSTA +LW
Sbjct: 119 RRLSTADWLW 128
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 RVLSTAQF 8
RV+S A+F
Sbjct: 1863 RVISAAEF 1870
303|Sequence|1511|1520|AQFLWMLGQA
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 AQFLWMLGQ 9
+Q +W LG+
Sbjct: 364 SQLMWALGE 372
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 AQFLWMLGQ 9
+Q +W LG+
Sbjct: 364 SQLMWALGE 372
>sp|ENV_HV1MV|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LWMLGQ 9
LW+LGQ
Sbjct: 802 LWILGQ 807
>sp|NCAP_DUGBA|NUCLEOPROTEIN virus (isolate ArD44313) (DUGV)
Query: 1 AQFLWMLGQA 10
+QFL+ +GQ+
Sbjct: 329 SQFLFEMGQS 338
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 AQFLWMLG 8
A LW+LG
Sbjct: 59 ASTLWLLG 66
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 LWMLGQ 9
LW+LGQ
Sbjct: 789 LWILGQ 794
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 AQFLWMLG 8
A LW+LG
Sbjct: 59 ASTLWLLG 66
>sp|NCAP_DUGBV|NUCLEOPROTEIN virus
Query: 1 AQFLWMLGQA 10
+QFL+ +GQ+
Sbjct: 328 SQFLFEMGQS 337
>sp|ETF1_MCV1|EARLY transcription factor 70 kDa|Molluscum contagiosum virus subtype 1
Query: 2 QFLWML 7
QFLW +
Sbjct: 618 QFLWAI 623
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 755 FPWLLGCA 762
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 749 FPWLLGCA 756
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 762 FPWLLGCA 769
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 749 FPWLLGCA 756
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 749 FPWLLGCA 756
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 AQFLWMLG 8
A +W+LG
Sbjct: 59 ASTMWLLG 66
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 762 FPWLLGCA 769
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 AQFLWMLG 8
A +W+LG
Sbjct: 59 ASTMWLLG 66
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 749 FPWLLGCA 756
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 749 FPWLLGCA 756
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 760 FPWLLGCA 767
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 749 FPWLLGCA 756
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 3 FLWMLGQA 10
F W+LG A
Sbjct: 759 FPWLLGCA 766
>sp|NEC2_HHV8P|NUCLEAR egress protein 2|Human herpesvirus 8 type P
Query: 3 FLWMLGQA 10
F W LG+A
Sbjct: 236 FQWSLGRA 243
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 4 LWMLGQA 10
LW LG+A
Sbjct: 109 LWSLGEA 115
304|Sequence|1516|1525|MLGQALVDEL
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MLGQALVDEL 10
++GQ +VDE
Sbjct: 2100 LIGQKIVDEF 2109
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MLGQALVDEL 10
++GQ +VDE
Sbjct: 2100 LIGQKIVDEF 2109
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MLGQALVDEL 10
++GQ +VDE
Sbjct: 2100 LIGQKIVDEF 2109
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MLGQALVDEL 10
++GQ +VDE
Sbjct: 1934 LIGQKIVDEF 1943
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MLGQALVDEL 10
++GQ +VDE
Sbjct: 2100 LIGQKIVDEF 2109
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 MLGQALVDEL 10
++GQ +VDE
Sbjct: 2100 LIGQKIVDEF 2109
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 2 LGQALVDE 9
+GQA VDE
Sbjct: 273 IGQAQVDE 280
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 2 LGQALVDE 9
+GQA VDE
Sbjct: 265 IGQAHVDE 272
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 2 LGQALVDE 9
+GQA VDE
Sbjct: 265 IGQAHVDE 272
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGQALVDEL 10
+GQ +VDE
Sbjct: 2102 IGQRIVDEF 2110
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 LGQALVDEL 10
+GQ +VDE
Sbjct: 2102 IGQRIVDEF 2110
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 GQALVDEL 10
GQ++V+EL
Sbjct: 1099 GQSVVEEL 1106
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 2 LGQALVDE 9
L QAL+D+
Sbjct: 413 LAQALIDQ 420
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 2 LGQALVDE 9
L QAL+D+
Sbjct: 413 LAQALIDQ 420
>sp|NCAP_DOBV|NUCLEOPROTEIN orthohantavirus (DOBV) (Dobrava virus)
Query: 2 LGQALVDE 9
L QAL+D+
Sbjct: 409 LAQALIDQ 416
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LGQALVDEL 10
LG+ LVD L
Sbjct: 1848 LGRVLVDVL 1856
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 LGQALVDEL 10
LG+ LVD L
Sbjct: 1849 LGRVLVDVL 1857
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 LGQALVDEL 10
LG+A+ D+L
Sbjct: 293 LGEAVPDDL 301
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 LGQALVDEL 10
LG+A+ D+L
Sbjct: 267 LGEAVPDDL 275
305|Sequence|1521|1530|LVDELTRWLQ
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 LVDELTRW 8
L DE+TRW
Sbjct: 2452 LADEVTRW 2459
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 LVDELTRW 8
L DE+TRW
Sbjct: 2452 LADEVTRW 2459
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 LVDELTRW 8
L DE+TRW
Sbjct: 2453 LADEVTRW 2460
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 LVDELTRW 8
LVD+++RW
Sbjct: 504 LVDKMSRW 511
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 LVDELTRWL 9
LVDE RWL
Sbjct: 415 LVDEPARWL 423
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 LVDELTRW 8
L DE+ RW
Sbjct: 2413 LADEVVRW 2420
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 LVDELTRW 8
L DE+ RW
Sbjct: 2413 LADEVVRW 2420
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 LVDELTRW 8
LVD+++RW
Sbjct: 516 LVDKMSRW 523
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 LVDELTRW 8
LVD+++RW
Sbjct: 516 LVDKMSRW 523
>sp|SHUT_ADE40|SHUTOFF protein|Human adenovirus F serotype 40
Query: 3 DELTRWL 9
DEL RWL
Sbjct: 279 DELARWL 285
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 3 DELTRWLQ 10
DE+ RW +
Sbjct: 11 DEMNRWFE 18
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 DELTRWLQ 10
+++TRWLQ
Sbjct: 3159 EKVTRWLQ 3166
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LVDELTRWL 9
LV E+T+WL
Sbjct: 888 LVFEVTKWL 896
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 LVDELTRWL 9
LV E+T+WL
Sbjct: 888 LVFEVTKWL 896
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 1 LVDELTRW 8
+VD L+RW
Sbjct: 49 IVDFLSRW 56
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate
Query: 1 LVDELTRW 8
+VD L+RW
Sbjct: 49 IVDFLSRW 56
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 LVDELTRW 8
+VD L+RW
Sbjct: 52 IVDFLSRW 59
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 LVDELTRWLQ 10
L DE+++W +
Sbjct: 2368 LSDEVSKWFR 2377
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DELTRWLQ 10
DE+ RW++
Sbjct: 1125 DEVDRWIR 1132
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DELTRWLQ 10
DE+ RW++
Sbjct: 1125 DEVDRWIR 1132
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 3 DELTRWL 9
++LT+WL
Sbjct: 296 EQLTKWL 302
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 3 DELTRWLQ 10
DE+ +W +
Sbjct: 11 DEMNKWFE 18
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 LVDELTRWL 9
++DE T WL
Sbjct: 2904 VMDETTNWL 2912
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 LVDELTRWL 9
++DE T WL
Sbjct: 2904 VMDETTNWL 2912
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 3 DELTRWL 9
D+L RWL
Sbjct: 281 DDLARWL 287
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 3 DELTRWL 9
D +TRW+
Sbjct: 1035 DGITRWI 1041
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 LVDELTRWL 9
+ +E+T WL
Sbjct: 591 MCEEMTSWL 599
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 LVDELTRWL 9
+ +E+T WL
Sbjct: 590 MCEEMTSWL 598
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 LVDELTRW 8
L DE+ +W
Sbjct: 2376 LYDEVKKW 2383
>sp|NRAM_I82A7|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 188 LVDSMGSWSQ 197
>sp|NRAM_I77A4|NEURAMINIDASE A virus (strain A/Swine/Colorado/1/1977
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I76AB|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I76A9|NEURAMINIDASE A virus (strain A/Swine/Hong
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I76A6|NEURAMINIDASE A virus (strain A/Memphis/110/1976
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I75A3|NEURAMINIDASE A virus (strain A/Victoria/3/1975
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I75A0|NEURAMINIDASE A virus (strain A/Beijing/39/1975
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I73A5|NEURAMINIDASE A virus (strain A/Port
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I72A8|NEURAMINIDASE A virus (strain A/Udorn/1972
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I72A4|NEURAMINIDASE A virus (strain A/Memphis/101/1972
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I72A3|NEURAMINIDASE A virus (strain A/Memphis/102/1972
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I72A2|NEURAMINIDASE A virus (strain A/Udorn/307/1972
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I71A1|NEURAMINIDASE A virus (strain A/Memphis/1/1971
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I70A0|NEURAMINIDASE A virus (strain A/Qu/7/1970
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I68A6|NEURAMINIDASE A virus (strain A/Northern
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I68A4|NEURAMINIDASE A virus (strain A/Hong
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I68A0|NEURAMINIDASE A virus (strain A/Aichi/2/1968
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|GLYC_LASSJ|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain Mouse/Sierra
Query: 5 LTRWL 9
LTRW+
Sbjct: 280 LTRWM 284
>sp|NRAM_I69A0|NEURAMINIDASE A virus (strain A/England/878/1969
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|NRAM_I67A0|NEURAMINIDASE A virus (strain A/Tokyo/3/1967
Query: 1 LVDELTRWLQ 10
LVD + W Q
Sbjct: 211 LVDSIGSWSQ 220
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 VDELTRWLQ 10
VD+ T W Q
Sbjct: 1110 VDDGTEWFQ 1118
>sp|GLYC_LASSG|PRE-GLYCOPROTEIN polyprotein GP complex|Lassa virus (strain GA391) (LASV)
Query: 5 LTRWL 9
LTRW+
Sbjct: 279 LTRWM 283
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 ELTRWLQ 10
++TRW++
Sbjct: 3074 KITRWME 3080
>sp|ICP27_VZVO|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Oka
Query: 3 DELTRWLQ 10
DEL W++
Sbjct: 292 DELLTWIK 299
>sp|ICP27_VZVD|MRNA export factor ICP27 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 DELTRWLQ 10
DEL W++
Sbjct: 292 DELLTWIK 299
306|Sequence|1526|1535|TRWLQEFTRH
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 WLQEFTR 9
W QEFTR
Sbjct: 352 WSQEFTR 358
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 RWLQEFT 8
RWL++FT
Sbjct: 1111 RWLKKFT 1117
>sp|GM_EBVG|ENVELOPE glycoprotein M|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WLQEFTRH 10
WL F RH
Sbjct: 261 WLASFMRH 268
>sp|GM_EBVB9|ENVELOPE glycoprotein M|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 WLQEFTRH 10
WL F RH
Sbjct: 261 WLASFLRH 268
>sp|GM_EBVA8|ENVELOPE glycoprotein M|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 WLQEFTRH 10
WL F RH
Sbjct: 261 WLASFLRH 268
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 WLQEFTRH 10
WLQE T H
Sbjct: 314 WLQEITYH 321
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 3 WLQEFTRH 10
WLQE T H
Sbjct: 314 WLQEITYH 321
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 3 WLQEFTRH 10
WLQE T H
Sbjct: 314 WLQEITYH 321
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 LQEFTRH 10
++EFTRH
Sbjct: 366 IREFTRH 372
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1603 TRWVDQEVRH 1612
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 TRWLQEFTRH 10
TRW+ + RH
Sbjct: 1602 TRWVDQEVRH 1611
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 3 WLQEFTRH 10
+LQ++T+H
Sbjct: 235 YLQQYTKH 242
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 WLQEFTRH 10
+LQ++T+H
Sbjct: 232 YLQQYTKH 239
>sp|NCAP_CCHFI|NUCLEOPROTEIN hemorrhagic fever virus (strain
Query: 2 RWLQEFTR 9
RW +EF +
Sbjct: 15 RWFEEFKK 22
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 1 TRWLQE 6
T+W+QE
Sbjct: 245 TKWVQE 250
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 1 TRWLQE 6
T+W+QE
Sbjct: 247 TKWVQE 252
>sp|C20L_VACCC|UNCHARACTERIZED protein C20L|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 WLQEFTRH 10
+LQ++T+H
Sbjct: 11 YLQQYTKH 18
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 TRWLQEFTRH 10
T+W+ + RH
Sbjct: 1603 TKWVDQEVRH 1612
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1128 WLKKFT 1133
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1128 WLKKFT 1133
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1129 WLKKFT 1134
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1129 WLKKFT 1134
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1107 WLKKFT 1112
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1091 WLKKFT 1096
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1098 WLKKFT 1103
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1117 WLKKFT 1122
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1094 WLKKFT 1099
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|NEP_I24A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Japan/1924
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 74 RWLIEEVRH 82
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1131 WLKKFT 1136
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1131 WLKKFT 1136
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1104 WLKKFT 1109
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1104 WLKKFT 1109
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1136 WLKKFT 1141
>sp|NEP_I01A0|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|NEP_I36A0|NUCLEAR export protein|Influenza A virus (strain A/Henry/1936
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I01A1|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1115 WLKKFT 1120
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1104 WLKKFT 1109
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1101 WLKKFT 1106
>sp|NEP_I78A4|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A4|NUCLEAR export protein|Influenza A virus (strain A/Silky
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A1|NUCLEAR export protein|Influenza A virus (strain A/Guinea
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I01A2|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 RWLQEFTRH 10
RW E +RH
Sbjct: 1462 RWPTERSRH 1470
>sp|NEP_I83A1|NUCLEAR export protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I80A2|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I78A3|NUCLEAR export protein|Influenza A virus (strain A/Mallard/New
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I77A9|NUCLEAR export protein|Influenza A virus (strain A/Equine/New
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I73A4|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 74 RWLIEEVRH 82
>sp|NEP_I59A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I35A3|NUCLEAR export protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A6|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A5|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1102 WLKKFT 1107
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1106 WLKKFT 1111
>sp|NEP_I80AA|NUCLEAR export protein|Influenza A virus (strain A/India/6263/1980
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I47A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I33A0|NUCLEAR export protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I03A0|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1103 WLKKFT 1108
>sp|NEP_I97A0|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I69A0|NUCLEAR export protein|Influenza A virus (strain A/England/878/1969
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I57A3|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I57A2|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I34A1|NUCLEAR export protein|Influenza A virus (strain A/Puerto
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I18A0|NUCLEAR export protein|Influenza A virus (strain A/Brevig
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I06A0|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1098 WLKKFT 1103
>sp|NEP_I85A3|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I60A0|NUCLEAR export protein|Influenza A virus (strain A/Ann
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I57A1|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I57A0|NUCLEAR export protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I54A2|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I51A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I45A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I43A0|NUCLEAR export protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I01A3|NUCLEAR export protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I67A2|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I97A1|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I67A0|NUCLEAR export protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I57A5|NUCLEAR export protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I54A0|NUCLEAR export protein|Influenza A virus (strain A/Leningrad/1/1954
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I03A1|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I000X|NUCLEAR export protein|Influenza A virus (strain A/X-31
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I77AB|NUCLEAR export protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I77AA|NUCLEAR export protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I68A5|NUCLEAR export protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1112 WLKKFT 1117
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1114 WLKKFT 1119
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1122 WLKKFT 1127
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1103 WLKKFT 1108
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1102 WLKKFT 1107
>sp|NEP_I71A1|NUCLEAR export protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1091 WLRKFT 1096
>sp|NEP_I68A0|NUCLEAR export protein|Influenza A virus (strain A/Aichi/2/1968
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I02A7|NUCLEAR export protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 67 RWLIEEVRH 75
>sp|NEP_I00A0|NUCLEAR export protein|Influenza A virus (strain A/Duck/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1120 WLKKFT 1125
>sp|NEP_I70A0|NUCLEAR export protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I68A4|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I50A0|NUCLEAR export protein|Influenza A virus (strain A/Fort
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I40A0|NUCLEAR export protein|Influenza A virus (strain A/Hickox/1940
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1113 WLKKFT 1118
>sp|NEP_I96A2|NUCLEAR export protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I83A8|NUCLEAR export protein|Influenza A virus (strain A/Hong
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I80A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I78A8|NUCLEAR export protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I78A7|NUCLEAR export protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I77A4|NUCLEAR export protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I77A0|NUCLEAR export protein|Influenza A virus (strain A/Alaska/6/1977
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I76A6|NUCLEAR export protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I75A0|NUCLEAR export protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I73A5|NUCLEAR export protein|Influenza A virus (strain A/Port
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I72A4|NUCLEAR export protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I72A3|NUCLEAR export protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I72A2|NUCLEAR export protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I61A1|NUCLEAR export protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NCAP_CCHFV|NUCLEOPROTEIN hemorrhagic fever virus (isolate
Query: 2 RWLQEFTR 9
+W +EF +
Sbjct: 15 KWFEEFKK 22
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 1 TRWLQEFTRH 10
T+W + T H
Sbjct: 596 TKWFKGITLH 605
>sp|NEP_I96A3|NUCLEAR export protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I05A1|NUCLEAR export protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 73 RWLIEEVRH 81
>sp|NEP_I07A0|NUCLEAR export protein|Influenza A virus (strain
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|NEP_I00A1|NUCLEAR export protein|Influenza A virus (strain A/New
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEVRH 85
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 3 WLQEFT 8
WL++FT
Sbjct: 1110 WLKKFT 1115
>sp|NEP_I56A3|NUCLEAR export protein|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 RWLQEFTRH 10
RWL E RH
Sbjct: 77 RWLIEEIRH 85
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 3 WLQEFTRH 10
W + F RH
Sbjct: 1127 WARVFCRH 1134
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Dumas)
Query: 3 WLQEFTRH 10
W + F RH
Sbjct: 1127 WARVFCRH 1134
307|Sequence|1531|1540|EFTRHHGTMS
>sp|PHOSP_PI4HB|PHOSPHOPROTEIN parainfluenza 4b virus (strain
Query: 1 EFTRHHGTM 9
E TR HG+M
Sbjct: 181 ESTRFHGSM 189
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 EFTRH 5
EFTRH
Sbjct: 646 EFTRH 650
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 EFTRH 5
EFTRH
Sbjct: 646 EFTRH 650
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 EFTRH 5
EFTRH
Sbjct: 646 EFTRH 650
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 EFTRH 5
EFTRH
Sbjct: 646 EFTRH 650
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 EFTRH 5
EFTRH
Sbjct: 646 EFTRH 650
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 FTRHHGT 8
F RHH T
Sbjct: 1578 FARHHDT 1584
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 FTRHHGT 8
F RHH T
Sbjct: 1577 FARHHDT 1583
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 FTRHHGT 8
F RHH T
Sbjct: 1577 FARHHDT 1583
>sp|VP35_EBOSU|POLYMERASE cofactor VP35|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 RHHG 7
RHHG
Sbjct: 8 RHHG 11
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 RHHG 7
RHHG
Sbjct: 265 RHHG 268
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 RHHGTMS 10
R+HGT++
Sbjct: 140 RYHGTVA 146
>sp|GAG_FOAMV|GAG polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 2 FTRHHGT 8
F R HGT
Sbjct: 379 FIRTHGT 385
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 4 RHHGTMS 10
R+HGT++
Sbjct: 140 RYHGTVA 146
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 EFTRHHGT 8
E+TR H T
Sbjct: 821 EYTRAHRT 828
>sp|MTA_HHV8P|POST-TRANSCRIPTIONAL regulator MTA|Human herpesvirus 8 type P
Query: 4 RHHG 7
RHHG
Sbjct: 197 RHHG 200
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 RHHG 7
RHHG
Sbjct: 224 RHHG 227
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 RHHG 7
RHHG
Sbjct: 224 RHHG 227
>sp|VP1_POVJC|MAJOR capsid protein VP1|JC polyomavirus (JCPyV) (JCV)
Query: 1 EFTRHHGTMS 10
E TR+ GT++
Sbjct: 209 ENTRYFGTLT 218
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 FTRHHGTMS 10
+TRH G S
Sbjct: 434 YTRHAGDFS 442
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 EFTRHH 6
+FT HH
Sbjct: 1324 QFTPHH 1329
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 EFTRHH 6
+FT HH
Sbjct: 1324 QFTPHH 1329
>sp|TEG1_HHV2H|TEGUMENT protein UL46|Human herpesvirus 2 (strain HG52)
Query: 4 RHHGTM 9
RHH T+
Sbjct: 79 RHHNTV 84
308|Sequence|1536|1545|HGTMSDVLRA
>sp|VPAP_HHV6G|DNA polymerase processivity factor|Human herpesvirus 6A (strain GS)
Query: 1 HGTMSDVLR 9
H T+SDVL+
Sbjct: 185 HSTVSDVLK 193
>sp|VPAP_HHV6U|DNA polymerase processivity factor|Human herpesvirus 6A (strain
Query: 1 HGTMSDVLR 9
H T+SDVL+
Sbjct: 190 HSTVSDVLK 198
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 GTMSDVLR 9
G MSDV+R
Sbjct: 1823 GDMSDVIR 1830
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 GTMSDVLR 9
G MSDV+R
Sbjct: 1823 GDMSDVIR 1830
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2373 HGVVSDALMA 2382
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2373 HGVVSDALMA 2382
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2374 HGVVSDALMA 2383
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 HGTMSDVLRA 10
+GT+ D+L+A
Sbjct: 856 NGTLKDILQA 865
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2330 HGVVSDTLMA 2339
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 467 HGTMQDL 473
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 HGTMSDV 7
HGTM D+
Sbjct: 472 HGTMQDL 478
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HGTMSDVL 8
HG+M D+L
Sbjct: 502 HGSMLDLL 509
>sp|EBNA4_EBVB9|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HGTMSDVL 8
HG+M D+L
Sbjct: 502 HGSMLDLL 509
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HGTMSDVL 8
HG+M D+L
Sbjct: 502 HGSMLDLL 509
>sp|V_PI2HT|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (strain
Query: 1 HGTMSDV 7
HG M+D+
Sbjct: 108 HGKMTDI 114
>sp|V_PI2H|NON-STRUCTURAL protein V|Human parainfluenza 2 virus (HPIV-2)
Query: 1 HGTMSDV 7
HG M+D+
Sbjct: 108 HGKMTDI 114
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 HGTMSDVL 8
+GT+SD+L
Sbjct: 7 NGTVSDIL 14
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2289 HGVISDKLMA 2298
>sp|VE1_HPV38|REPLICATION protein E1|Human papillomavirus 38
Query: 2 GTMSDVLRA 10
GT+ D+LR+
Sbjct: 150 GTVRDLLRS 158
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2334 HGVVSDELMA 2343
>sp|PHOSP_PI2HT|PHOSPHOPROTEIN parainfluenza 2 virus (strain
Query: 1 HGTMSDV 7
HG M+D+
Sbjct: 108 HGKMTDI 114
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GTMSDVLR 9
GT+ DV+R
Sbjct: 1612 GTLPDVVR 1619
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 GTMSDVLR 9
GT+ DV+R
Sbjct: 1612 GTLPDVVR 1619
>sp|PHOSP_PI2H|PHOSPHOPROTEIN parainfluenza 2 virus (HPIV-2)
Query: 1 HGTMSDV 7
HG M+D+
Sbjct: 108 HGKMTDI 114
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2334 HGVVSDELMA 2343
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 GTMSDVLR 9
GT+ DV+R
Sbjct: 1611 GTLPDVVR 1618
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2297 HGVVSDKLMA 2306
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 HGTMSDVLRA 10
HG +SD L A
Sbjct: 2271 HGIISDKLMA 2280
>sp|V_PI4HA|NON-STRUCTURAL protein V|Human parainfluenza 4a virus (strain
Query: 1 HGTMSD 6
HG+M+D
Sbjct: 141 HGSMND 146
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 1 HGTMSD 6
HG+M+D
Sbjct: 141 HGSMND 146
309|Sequence|1541|1550|DVLRAERYLL
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 DVLRAERY 8
D+++ ERY
Sbjct: 529 DIMKEERY 536
>sp|VE1_HPV15|REPLICATION protein E1|Human papillomavirus 15
Query: 1 DVLRAERY 8
D+++ ERY
Sbjct: 522 DIMKEERY 529
>sp|KBTB2_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 DVLRAERYLL 10
DVL+ YLL
Sbjct: 92 DVLKCADYLL 101
>sp|KBTB2_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 DVLRAERYLL 10
DVL+ YLL
Sbjct: 98 DVLKCADYLL 107
>sp|KBTB2_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 DVLRAERYLL 10
DVL+ YLL
Sbjct: 98 DVLKCADYLL 107
310|Sequence|1546|1555|ERYLLTQELL
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 575 ERYLRDQQLL 584
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLKDQQLL 593
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 578 ERYLKDQQLL 587
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 576 ERYLKDQQLL 585
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 577 ERYLRDQQLL 586
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLRDQQLL 593
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 571 ERYLKDQQLL 580
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 579 ERYLRDQQLL 588
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 560 ERYLKDQQLL 569
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 587 ERYLKDQQLL 596
>sp|ENV_HV196|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 570 ERYLKDQQLL 579
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 582 ERYLKDQQLL 591
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLKDQQLL 593
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 593 ERYLRDQQLL 602
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLRDQQLL 593
>sp|ENV_HV1H2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLKDQQLL 593
>sp|ENV_HV1BR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 589 ERYLKDQQLL 598
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 573 ERYLRDQQLL 582
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLKDQQLL 593
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 580 ERYLRDQQLL 589
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 575 ERYLKDQQLL 584
>sp|ENV_HV1B8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 579 ERYLKDQQLL 588
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 ERYLLTQEL 9
ER+ LTQEL
Sbjct: 9 ERFTLTQEL 17
>sp|ENV_HV1H3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 584 ERYLKDQQLL 593
>sp|ENV_HV1J3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 595 ERYLKDQQLL 604
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 574 ERYLKDQQLL 583
>sp|ENV_HV1A2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 583 ERYLRDQQLL 592
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 578 ERYLKDQQLL 587
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 580 ERYLKDQQLL 589
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 570 ERYLKDQQLL 579
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 571 ERYLRDQQLL 580
>sp|ENV_HV1C4|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 596 ERYLKDQQLL 605
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 585 ERYLKDQQLL 594
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 581 ERYLKDQQLL 590
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 574 ERYLRDQQLL 583
>sp|ENV_HV1Z6|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 583 ERYLKDQQLL 592
>sp|ENV_HV1OY|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 583 ERYLKDQQLL 592
>sp|ENV_HV1Z2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+LL
Sbjct: 581 ERYLKDQQLL 590
>sp|ENV_HV1B9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+L+
Sbjct: 581 ERYLRDQQLM 590
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+L+
Sbjct: 590 ERYLKDQQLM 599
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ERYL Q+L+
Sbjct: 576 ERYLKDQQLM 585
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 ERYLLTQEL 9
E YLL QEL
Sbjct: 418 EEYLLNQEL 426
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
ER+L Q+LL
Sbjct: 572 ERHLRDQQLL 581
>sp|AN_EBVG|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 YLLTQE 8
YLLTQ+
Sbjct: 284 YLLTQD 289
>sp|AN_EBVB9|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YLLTQE 8
YLLTQ+
Sbjct: 284 YLLTQD 289
>sp|AN_EBVA8|SHUTOFF alkaline exonuclease|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 YLLTQE 8
YLLTQ+
Sbjct: 284 YLLTQD 289
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 ERYLLTQEL 9
ER+ + QEL
Sbjct: 9 ERFTIQQEL 17
>sp|ENV_HV1Z8|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 ERYLLTQELL 10
E YL Q+LL
Sbjct: 591 ESYLKDQQLL 600
311|Sequence|1551|1560|TQELLQGGEV
>sp|E1A_ADE04|EARLY E1A protein|Human adenovirus E serotype 4
Query: 3 ELLQGGE 9
+LLQGG+
Sbjct: 238 DLLQGGD 244
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 ELLQGGEV 10
ELL GG V
Sbjct: 512 ELLAGGRV 519
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 ELLQGGEV 10
ELL GG V
Sbjct: 512 ELLAGGRV 519
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 3 ELLQGGEV 10
E L+GG+V
Sbjct: 687 ETLEGGDV 694
312|Sequence|1556|1565|QGGEVHRGVL
>sp|GG_HHV2H|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain HG52)
Query: 2 GGEVHRGVL 10
GGE+H G+L
Sbjct: 185 GGELHVGLL 193
>sp|GG_HHV2B|ENVELOPE glycoprotein G|Human herpesvirus 2 (strain B4327UR)
Query: 2 GGEVHRGVL 10
GGE+H G+L
Sbjct: 185 GGELHVGLL 193
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 QGGEVHRGVL 10
+GG HR L
Sbjct: 2151 KGGRAHRAAL 2160
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 GGEVHRGVL 10
GGE HR ++
Sbjct: 1710 GGERHRQIV 1718
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 GGEVHRGVL 10
GGE HR ++
Sbjct: 1710 GGERHRQIV 1718
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GGEVHRGVL 10
G VHRG+L
Sbjct: 389 GTGVHRGLL 397
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGEVHRGVL 10
G VHRG+L
Sbjct: 389 GTGVHRGLL 397
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGEVHRGVL 10
G VHRG+L
Sbjct: 389 GTGVHRGLL 397
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GGEVH 6
GGEVH
Sbjct: 1153 GGEVH 1157
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GGEVH 6
GGEVH
Sbjct: 1153 GGEVH 1157
>sp|TAT_HV1M2|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 1 QGGEVHR 7
Q GEVH+
Sbjct: 60 QSGEVHQ 66
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 2 GGEVHR 7
G EVHR
Sbjct: 188 GAEVHR 193
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 2 GGEVHR 7
G EVHR
Sbjct: 188 GAEVHR 193
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 2 GGEVHR 7
G EVHR
Sbjct: 188 GAEVHR 193
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 QGGEVHRGVL 10
+GG+ HR L
Sbjct: 2157 KGGKAHRMAL 2166
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 QGGEVHRGVL 10
+GG+ HR L
Sbjct: 2157 KGGKAHRMAL 2166
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 QGGEVHRGVL 10
+GG+ HR L
Sbjct: 2158 KGGKAHRMAL 2167
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 QGGEVHRGVL 10
+GG+ HR L
Sbjct: 2158 KGGKAHRMAL 2167
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 QGGEVHRGVL 10
+GG+ HR L
Sbjct: 2158 KGGKAHRMAL 2167
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 QGGEVHRGVL 10
+GG+ HR L
Sbjct: 2158 KGGKAHRMAL 2167
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 GEVHRGV 9
GEV RG+
Sbjct: 362 GEVGRGI 368
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 GEVHRGV 9
GEV RG+
Sbjct: 362 GEVGRGI 368
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 GEVHRGV 9
GEV RG+
Sbjct: 361 GEVGRGI 367
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 GEVHRGV 9
GEV RG+
Sbjct: 360 GEVGRGI 366
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 1 QGGEVHRG 8
Q E HRG
Sbjct: 371 QSWEAHRG 378
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 QGGEVHRGVL 10
+GG HR L
Sbjct: 2155 KGGRAHRMAL 2164
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 QGGEVHRGVL 10
+GG HR L
Sbjct: 2159 KGGRAHRMAL 2168
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 QGGEVHRGVL 10
+GG HR L
Sbjct: 2159 KGGRAHRMAL 2168
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GEVHRGVL 10
G++ RG+L
Sbjct: 837 GQIGRGIL 844
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 QGGEVH 6
+GGE+H
Sbjct: 186 EGGEIH 191
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GGEVHRGVL 10
GG++H ++
Sbjct: 1195 GGQIHLAIM 1203
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 GGEVHRGVL 10
GG++H ++
Sbjct: 1195 GGQIHLAIM 1203
313|Sequence|1561|1570|HRGVLDQLYT
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GVLDQLYT 10
GV+ QLYT
Sbjct: 1993 GVVAQLYT 2000
>sp|M22_HRSV|PROTEIN M2-2|Human respiratory syncytial virus
Query: 1 HRGVLDQLYT 10
H GV++ +YT
Sbjct: 75 HLGVIEDIYT 84
>sp|UL26_HCMVM|TEGUMENT protein UL26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 HRGVLDQ 7
HRGV+D+
Sbjct: 24 HRGVIDR 30
>sp|UL26_HCMVA|TEGUMENT protein UL26|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 HRGVLDQ 7
HRGV+D+
Sbjct: 24 HRGVIDR 30
>sp|M22_HRSVA|PROTEIN M2-2|Human respiratory syncytial virus A
Query: 1 HRGVLDQLYT 10
H G+++ +YT
Sbjct: 75 HLGIIEDIYT 84
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 GVLDQLY 9
G++D+LY
Sbjct: 197 GIIDELY 203
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HRGVLDQLY 9
H G+LDQ +
Sbjct: 838 HVGLLDQAW 846
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 HRGVLDQLY 9
H G+LDQ +
Sbjct: 838 HVGLLDQAW 846
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 3 GVLDQL 8
G+LDQL
Sbjct: 101 GILDQL 106
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 RGVLDQLYT 10
RG +D+L T
Sbjct: 1213 RGAIDELTT 1221
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 GVLDQLY 9
G+LD+LY
Sbjct: 482 GLLDRLY 488
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 3 GVLDQLY 9
G+LD+LY
Sbjct: 481 GLLDRLY 487
>sp|DUT_EBVG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 HRGVLDQLYT 10
H G++D YT
Sbjct: 71 HVGIIDPGYT 80
>sp|DUT_EBVB9|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 HRGVLDQLYT 10
H G++D YT
Sbjct: 71 HVGIIDPGYT 80
>sp|DUT_EBVA8|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Epstein-Barr virus (strain
Query: 1 HRGVLDQLYT 10
H G++D YT
Sbjct: 71 HVGIIDPGYT 80
>sp|AGNO_POVJC|AGNOPROTEIN polyomavirus (JCPyV) (JCV)
Query: 1 HRGVLDQLYT 10
H G+ +Q Y+
Sbjct: 54 HSGLTEQTYS 63
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 1 HRGVLDQL 8
H GV D+L
Sbjct: 846 HLGVCDEL 853
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 HRGVLDQL 8
H GV D+L
Sbjct: 846 HLGVCDEL 853
314|Sequence|1566|1575|DQLYTSQAEA
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 QLYTSQAEA 10
Q +T++AEA
Sbjct: 847 QYFTTRAEA 855
>sp|ICP4_HHV11|MAJOR viral transcription factor ICP4|Human herpesvirus 1 (strain 17)
Query: 3 LYTSQAEA 10
LYT AEA
Sbjct: 380 LYTPDAEA 387
>sp|ICP4_HHV2H|MAJOR viral transcription factor ICP4|Human herpesvirus 2 (strain HG52)
Query: 3 LYTSQAEA 10
LYT AEA
Sbjct: 437 LYTPDAEA 444
315|Sequence|1571|1580|SQAEATLPGP
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 AEATLPGP 10
+EATLP P
Sbjct: 620 SEATLPSP 627
>sp|GQ2_HHV6U|GLYCOPROTEIN Q2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 AEATLPGP 10
+EATLP P
Sbjct: 178 SEATLPSP 185
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 2 QAEATLPGP 10
Q EATLP P
Sbjct: 186 QPEATLPKP 194
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 SQAEATL 7
+QAEATL
Sbjct: 742 AQAEATL 748
316|Sequence|1576|1585|TLPGPTEAPN
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 PTEAPN 10
P+EAPN
Sbjct: 1333 PSEAPN 1338
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 5 PTEAPN 10
P+EAPN
Sbjct: 1333 PSEAPN 1338
>sp|UL79_HHV8P|PROTEIN UL79 homolog|Human herpesvirus 8 type P
Query: 3 PGPTEA 8
PGP EA
Sbjct: 213 PGPVEA 218
Query: 2 LPGPTEA 8
LP P+EA
Sbjct: 238 LPAPSEA 244
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 5 PTEAPN 10
PTE PN
Sbjct: 91 PTEEPN 96
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 3 PGPTEAP 9
PGPTE P
Sbjct: 474 PGPTERP 480
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LPGPTEA 8
+P PTEA
Sbjct: 713 IPNPTEA 719
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LPGPTEA 8
+P PTEA
Sbjct: 715 IPNPTEA 721
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 TLPGPTEAPN 10
T P P + PN
Sbjct: 263 TTPRPIKLPN 272
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 TLPGPTEA 8
T PG TEA
Sbjct: 1810 TPPGTTEA 1817
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 3 PGPTEAP 9
P P+EAP
Sbjct: 250 PAPSEAP 256
>sp|PHOSP_PI4HA|PHOSPHOPROTEIN parainfluenza 4a virus (strain
Query: 3 PGPTEAP 9
P P EAP
Sbjct: 59 PAPVEAP 65
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 TLPGPTEAPN 10
T P P PN
Sbjct: 263 TTPRPIRLPN 272
>sp|SCP_HCMVM|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 1 TLPGPTEA 8
T PGPT A
Sbjct: 4 TAPGPTVA 11
>sp|SCP_HCMVA|SMALL capsomere-interacting protein|Human cytomegalovirus (strain
Query: 1 TLPGPTEA 8
T PGPT A
Sbjct: 4 TAPGPTVA 11
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 TLPGPTEA 8
T PG TEA
Sbjct: 1816 TPPGTTEA 1823
>sp|DNBI_VZVO|MAJOR DNA-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 4 GPTEAPN 10
GP APN
Sbjct: 735 GPVSAPN 741
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 TLPGPTEAPN 10
T GP +AP+
Sbjct: 80 TYAGPIKAPD 89
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 3 PGPTEAP 9
PG T AP
Sbjct: 17 PGATSAP 23
>sp|DNBI_VZVD|MAJOR DNA-binding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 GPTEAPN 10
GP APN
Sbjct: 735 GPVSAPN 741
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 TLPGPTEAPN 10
T P P PN
Sbjct: 263 TTPRPLRLPN 272
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 TLPGPTEAPN 10
T P P PN
Sbjct: 263 TTPRPLRLPN 272
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 TLPGPTEAPN 10
T P P PN
Sbjct: 263 TTPRPLRLPN 272
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 TLPGPTEAPN 10
T P P PN
Sbjct: 263 TTPRPLRLPN 272
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 3 PGPTEAP 9
P PTE P
Sbjct: 179 PAPTECP 185
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 TLPGPTEAPN 10
T P P PN
Sbjct: 263 TTPRPLRLPN 272
317|Sequence|1581|1590|TEAPNAPSTV
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 TEAPNAPST 9
T PN+PST
Sbjct: 127 TSLPNSPST 135
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TVTPNAPS 469
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TVTPNAPS 469
>sp|SHUT_ADE02|SHUTOFF protein|Human adenovirus C serotype 2
Query: 1 TEAPNAPST 9
T+A NAP+T
Sbjct: 22 TDAANAPTT 30
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 APNAPSTV 10
APNAP+ +
Sbjct: 841 APNAPTAI 848
>sp|SHUT_ADE05|SHUTOFF protein|Human adenovirus C serotype 5
Query: 1 TEAPNAPST 9
T+A NAP+T
Sbjct: 22 TDAANAPTT 30
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 2 EAPNAP 7
E+PNAP
Sbjct: 304 ESPNAP 309
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 2 EAPNAP 7
E+PNAP
Sbjct: 304 ESPNAP 309
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 EAPNAP 7
E+PNAP
Sbjct: 304 ESPNAP 309
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TEAPNAP 7
TE+PN P
Sbjct: 357 TESPNGP 363
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 2 EAPNAP 7
E+PNAP
Sbjct: 261 ESPNAP 266
>sp|TERM_ADE05|PRETERMINAL protein|Human adenovirus C serotype 5
Query: 3 APNAPSTV 10
AP AP+T+
Sbjct: 64 APGAPATL 71
>sp|TERM_ADE02|PRETERMINAL protein|Human adenovirus C serotype 2
Query: 3 APNAPSTV 10
AP AP+T+
Sbjct: 64 APGAPATL 71
>sp|VE2_HPV40|REGULATORY protein E2|Human papillomavirus 40
Query: 1 TEAPNAPST 9
T+ P+AP+T
Sbjct: 219 TDTPDAPAT 227
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 3 APNAPST 9
AP AP+T
Sbjct: 46 APGAPAT 52
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 390 TVTPNAPS 397
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TVTPNAPS 469
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TVTPNAPS 469
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TVTPNAPS 469
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TVTPNAPS 469
>sp|VP16_HHV1F|TEGUMENT protein VP16|Human herpesvirus 1 (strain F)
Query: 1 TEAPNAPST 9
TE P AP T
Sbjct: 312 TEEPGAPLT 320
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TITPNAPS 469
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 3 APNAPST 9
+PNAP+T
Sbjct: 348 SPNAPNT 354
>sp|VP16_HHV11|TEGUMENT protein VP16|Human herpesvirus 1 (strain 17)
Query: 1 TEAPNAPST 9
TE P AP T
Sbjct: 312 TEEPGAPLT 320
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TEAPNAPS 8
T PNAPS
Sbjct: 462 TITPNAPS 469
318|Sequence|1586|1595|APSTVSSGLG
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 PSTVSS 7
PST+SS
Sbjct: 304 PSTISS 309
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 PSTVSS 7
PST+SS
Sbjct: 304 PSTISS 309
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 PSTVSS 7
PST+SS
Sbjct: 304 PSTISS 309
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 2 PSTVSSG 8
PST +SG
Sbjct: 56 PSTTASG 62
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 4 TVSSGLG 10
TVS+GLG
Sbjct: 196 TVSTGLG 202
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 3 STVSSGL 9
ST+SSG+
Sbjct: 1235 STISSGI 1241
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 APSTVSSGL 9
+P+T+++GL
Sbjct: 1356 SPTTIAAGL 1364
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 APSTVSSGL 9
+P+T+++GL
Sbjct: 1356 SPTTIAAGL 1364
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 APSTVSSGL 9
+P+T+++GL
Sbjct: 1356 SPTTIAAGL 1364
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 APSTVSSGL 9
+P+T+++GL
Sbjct: 1356 SPTTIAAGL 1364
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 APSTVSSGL 9
+P+T+++GL
Sbjct: 1284 SPTTIAAGL 1292
>sp|PG162_VAR67|PROTEIN OPG162|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 STVSSGLG 10
ST+ SG+G
Sbjct: 26 STIISGIG 33
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 STVSSGLG 10
ST+ SG+G
Sbjct: 26 STIISGIG 33
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 3 STVSSGLG 10
ST+ SG+G
Sbjct: 26 STIISGIG 33
319|Sequence|1591|1600|SSGLGAEEPL
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 1 SSGLGAE 7
SSG GAE
Sbjct: 195 SSGTGAE 201
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 1 SSGLGAE 7
SSG GAE
Sbjct: 195 SSGTGAE 201
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SSGLGAEEPL 10
S G+G + PL
Sbjct: 480 SGGVGFDRPL 489
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 GLGAEEPL 10
G G EEP+
Sbjct: 2634 GAGHEEPM 2641
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 GLGAEEPL 10
G G EEP+
Sbjct: 2634 GAGHEEPM 2641
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 GLGAEEPL 10
G G EEP+
Sbjct: 2634 GAGHEEPM 2641
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 GLGAEEPL 10
G G EEP+
Sbjct: 2634 GAGHEEPM 2641
320|Sequence|1596|1605|AEEPLSSMTD
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AEEPLSSMTD 10
AEEPLS+ +
Sbjct: 699 AEEPLSAYVN 708
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AEEPLSSMTD 10
AEEPLS+ +
Sbjct: 699 AEEPLSAYVN 708
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 3 EPLSSMT 9
EPLSS+T
Sbjct: 387 EPLSSLT 393
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 3 EPLSSMT 9
EPLSS+T
Sbjct: 387 EPLSSLT 393
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1)
Query: 2 EEPLSSMTD 10
EEP SM+D
Sbjct: 691 EEPFLSMSD 699
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 EEPLSSMTD 10
EEP SM+D
Sbjct: 669 EEPFLSMSD 677
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 EEPLSSMTD 10
EEP SM+D
Sbjct: 664 EEPFLSMSD 672
>sp|PG170_VAR67|PROTEIN OPG170|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 EPLSSMT 9
EP++SMT
Sbjct: 107 EPINSMT 113
>sp|PG170_VACCC|PROTEIN OPG170|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 EPLSSMT 9
EP++SMT
Sbjct: 107 EPINSMT 113
>sp|PG170_MONPV|PROTEIN OPG170|Monkeypox virus (MPXV)
Query: 3 EPLSSMT 9
EP++SMT
Sbjct: 109 EPMNSMT 115
321|Sequence|1601|1610|SSMTDDMGSP
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 1189 ATMTDDIG 1196
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 SSMTDDMG 8
++MTDD+G
Sbjct: 909 ATMTDDIG 916
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 TDDMGSP 10
TDD+ SP
Sbjct: 1750 TDDVSSP 1756
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 TDDMGSP 10
TDD+ SP
Sbjct: 1750 TDDVSSP 1756
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 4 TDDMGS 9
TDD+GS
Sbjct: 242 TDDIGS 247
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 4 TDDMGS 9
TDD+GS
Sbjct: 242 TDDIGS 247
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 4 TDDMGS 9
TDD+GS
Sbjct: 242 TDDIGS 247
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 SSMTDDMGSP 10
+S+T D+ SP
Sbjct: 629 NSLTRDLASP 638
>sp|CEP2_HHV2H|CYTOPLASMIC envelopment protein 2|Human herpesvirus 2 (strain HG52)
Query: 2 SMTDDMGS 9
+M DD+GS
Sbjct: 210 AMDDDLGS 217
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 SSMTDDMGSP 10
S + DD G+P
Sbjct: 2000 SFVADDSGTP 2009
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 SSMTDDMGSP 10
S + DD G+P
Sbjct: 2000 SFVADDSGTP 2009
>sp|TRM3_HHV11|TRIPARTITE terminase subunit 3|Human herpesvirus 1 (strain 17)
Query: 1 SSMTDDMGSP 10
SS+T+ G P
Sbjct: 174 SSLTETTGPP 183
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 1 SSMTDDMGS 9
+S TD MGS
Sbjct: 62 TSETDSMGS 70
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 1 SSMTDDMGS 9
+S TD MGS
Sbjct: 62 TSETDSMGS 70
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 SSMTDDMGS 9
S +T+DMG+
Sbjct: 787 SVVTNDMGT 795
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 1 SSMTDDMGS 9
S +T+DMG+
Sbjct: 781 SVVTNDMGT 789
322|Sequence|1606|1615|DMGSPLSTGY
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 DMGSPLSTG 9
D+G PL+ G
Sbjct: 1201 DLGLPLNAG 1209
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 1 DMGSPLS 7
D+GSPLS
Sbjct: 603 DVGSPLS 609
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 MGSPLSTG 9
MG+PLST
Sbjct: 1 MGAPLSTA 8
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 MGSPLSTG 9
MG+PLST
Sbjct: 1 MGAPLSTA 8
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 2 MGSPLSTG 9
MG+PLST
Sbjct: 1 MGAPLSTA 8
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 2 MGSPLST 8
MG+PLST
Sbjct: 1 MGAPLST 7
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 MGSPLST 8
MG+PLST
Sbjct: 1 MGAPLST 7
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 MGSPLST 8
MG+PLST
Sbjct: 1 MGAPLST 7
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 2 MGSPLST 8
MG+PLST
Sbjct: 1 MGAPLST 7
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 DMGSPLSTG 9
D G PLS G
Sbjct: 230 DFGVPLSYG 238
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 DMGSPLSTG 9
D G PLS G
Sbjct: 230 DFGVPLSYG 238
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 DMGSPLSTG 9
D G PLS G
Sbjct: 230 DFGVPLSYG 238
>sp|V_MEASY|NON-STRUCTURAL protein V|Measles virus (strain Yamagata-1) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASY|PHOSPHOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASF|PHOSPHOPROTEIN virus (strain Edmonston B)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 MGSPLSTG 9
+GSP+ TG
Sbjct: 470 LGSPIGTG 477
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MGSPLSTG 9
+GSP+ TG
Sbjct: 470 LGSPIGTG 477
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 DMGSPLSTGY 10
+MG P T Y
Sbjct: 4265 NMGVPCCTSY 4274
>sp|UL101_HCMVA|UNCHARACTERIZED protein UL101|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DMGSPLSTG 9
D G+P++TG
Sbjct: 9 DGGAPMTTG 17
>sp|ORF9B_SARS2|ORF9B protein|Severe acute respiratory syndrome coronavirus
Query: 2 MGSPLS 7
+GSPLS
Sbjct: 48 LGSPLS 53
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 MGSPLSTGY 10
+G+P TG+
Sbjct: 602 LGTPADTGH 610
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 MGSPLSTGY 10
+G+P TG+
Sbjct: 602 LGTPADTGH 610
>sp|VL2_HPV31|MINOR capsid protein L2|Human papillomavirus 31
Query: 5 PLSTGY 10
PLSTG+
Sbjct: 394 PLSTGF 399
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 1 DMGSPLSTGY 10
D+G P + GY
Sbjct: 154 DIGEPDTEGY 163
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 5 PLSTGY 10
PLS+GY
Sbjct: 398 PLSSGY 403
323|Sequence|1611|1620|LSTGYHTRSG
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LSTGYHTR 8
+STGYH R
Sbjct: 4734 VSTGYHFR 4741
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LSTGYHTR 8
+STGYH R
Sbjct: 4711 VSTGYHFR 4718
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 1 LSTGYHTRSG 10
ST YH +SG
Sbjct: 959 FSTPYHPQSG 968
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 5 YHTRSG 10
YH RSG
Sbjct: 403 YHDRSG 408
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3413 LSTGCHT 3419
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3451 LSTGCHT 3457
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3471 LSTGCHT 3477
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3501 LSTGCHT 3507
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3413 LSTGCHT 3419
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3451 LSTGCHT 3457
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3471 LSTGCHT 3477
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 LSTGYHT 7
LSTG HT
Sbjct: 3501 LSTGCHT 3507
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 LSTGYHTRSG 10
L TGY +SG
Sbjct: 62 LFTGYFPKSG 71
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 LSTGYHTRSG 10
L TGY +SG
Sbjct: 62 LFTGYFPKSG 71
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1034 GYHTQTA 1040
>sp|NEP_INBYA|NUCLEAR export protein|Influenza B virus (strain B/Yamagata/1/1973)
Query: 2 STGYHTR 8
ST YH R
Sbjct: 53 STDYHQR 59
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1032 GYHTQTA 1038
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 TGYHTRSG 10
T YH +SG
Sbjct: 559 TKYHLKSG 566
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1034 GYHTQTA 1040
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 1 LSTGYHTRSG 10
L TGY +SG
Sbjct: 62 LFTGYFPKSG 71
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1032 GYHTQTA 1038
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1032 GYHTQTA 1038
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1032 GYHTQTA 1038
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1032 GYHTQTA 1038
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 TGYHTRSG 10
T YH +SG
Sbjct: 559 TKYHLKSG 566
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 TGYHTRSG 10
T YH +SG
Sbjct: 559 TKYHLKSG 566
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 TGYHTRSG 10
T YH +SG
Sbjct: 559 TKYHLKSG 566
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1034 GYHTQTA 1040
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 4 GYHTRSG 10
GYHT++
Sbjct: 1034 GYHTQTA 1040
>sp|ETF2_YMTV5|EARLY transcription factor 82 kDa|Yaba monkey tumor virus (strain
Query: 2 STGYH 6
+TGYH
Sbjct: 515 TTGYH 519
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 4 GYHTRS 9
GYHT++
Sbjct: 1048 GYHTQT 1053
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 TGYHTRSG 10
T YH +SG
Sbjct: 559 TKYHLKSG 566
>sp|VL2_HPV6A|MINOR capsid protein L2|Human papillomavirus type 6a
Query: 6 HTRSG 10
HTRSG
Sbjct: 306 HTRSG 310
>sp|VL2_HPV6B|MINOR capsid protein L2|Human papillomavirus type 6b
Query: 6 HTRSG 10
HTRSG
Sbjct: 306 HTRSG 310
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 LSTGYHTRSG 10
LS G H R G
Sbjct: 429 LSGGTHYRQG 438
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 3 TGYHTRSG 10
T YH +SG
Sbjct: 559 TKYHLKSG 566
>sp|VL2_HPV28|MINOR capsid protein L2|Human papillomavirus 28
Query: 6 HTRSG 10
HTRSG
Sbjct: 310 HTRSG 314
324|Sequence|1616|1625|HTRSGSEEAV
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 HTRSGSEE 8
H R+G EE
Sbjct: 163 HGRAGEEE 170
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 3 RSGSEEAV 10
R+G+EE V
Sbjct: 521 RAGAEEGV 528
325|Sequence|1621|1630|SEEAVTDPGE
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 2 EEAVTDPGE 10
E+A DPGE
Sbjct: 569 EDAARDPGE 577
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 SEEAVTDPG 9
++EAV DPG
Sbjct: 2946 AKEAVEDPG 2954
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 SEEAVTDPG 9
+ EAV DPG
Sbjct: 2944 AREAVEDPG 2952
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 SEEAVTDPG 9
+ EAV DPG
Sbjct: 2931 AAEAVQDPG 2939
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 EEAVTDP 8
EEAVT+P
Sbjct: 272 EEAVTNP 278
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 3 EAVTDPGE 10
E +TDP E
Sbjct: 538 ETITDPAE 545
>sp|VP30_EBOZM|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 SEEAVTDPG 9
+EEA T+PG
Sbjct: 270 NEEASTNPG 278
>sp|VP30_EBOZ5|TRANSCRIPTIONAL activator VP30|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 SEEAVTDPG 9
+EEA T+PG
Sbjct: 270 NEEASTNPG 278
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 AVTDPGE 10
A TDP E
Sbjct: 3886 AATDPSE 3892
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 AVTDPGE 10
A TDP E
Sbjct: 3886 AATDPSE 3892
>sp|DNB2_ADE12|DNA-BINDING protein|Human adenovirus A serotype 12
Query: 5 VTDPG 9
VTDPG
Sbjct: 386 VTDPG 390
326|Sequence|1626|1635|TDPGEREAGA
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 TDPGEREAGA 10
TDP E+E A
Sbjct: 756 TDPEEQEQSA 765
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 TDPGEREAGA 10
TDP E+E A
Sbjct: 756 TDPEEQEQSA 765
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 TDPGERE 7
TDP E+E
Sbjct: 541 TDPAEQE 547
>sp|VIF_HV1VI|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 3 PGERE 7
PGERE
Sbjct: 74 PGERE 78
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 TDPGEREAG 9
T PGE +G
Sbjct: 48 TKPGEEASG 56
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 TDPGER 6
T PGER
Sbjct: 216 THPGER 221
327|Sequence|1631|1640|REAGASLYQG
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 REAGASLYQ 9
RE+ SLY+
Sbjct: 75 RESAGSLYR 83
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 EAGASLYQG 10
+AGASL G
Sbjct: 248 KAGASLIDG 256
328|Sequence|1636|1645|SLYQGLMRTA
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 YQGLMRT 9
YQG MRT
Sbjct: 859 YQGKMRT 865
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 3 YQGLMRT 9
YQG MRT
Sbjct: 860 YQGKMRT 866
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 3 YQGLMRT 9
YQG MRT
Sbjct: 860 YQGKMRT 866
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 SLYQGLMRTA 10
+LYQGL+ A
Sbjct: 1052 ALYQGLVEGA 1061
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LYQGLMRTA 10
LYQ +RTA
Sbjct: 265 LYQSTVRTA 273
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 YQGLMRT 9
Y+G MRT
Sbjct: 862 YEGRMRT 868
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 YQGLMRT 9
Y+G MRT
Sbjct: 861 YEGKMRT 867
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 YQGLMRT 9
Y+G MRT
Sbjct: 861 YEGKMRT 867
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 LYQGLMRTA 10
LYQ +RTA
Sbjct: 265 LYQSPVRTA 273
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 SLYQGLMRTA 10
+LYQGL + A
Sbjct: 152 NLYQGLDQLA 161
>sp|BDLF3_EBVB9|GLYCOPROTEIN BDLF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SLYQGLM 7
SLY+GL+
Sbjct: 228 SLYKGLV 234
329|Sequence|1641|1650|LMRTASELLL
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 MRTASELL 9
MRTA ELL
Sbjct: 1494 MRTAVELL 1501
330|Sequence|1646|1655|SELLLDRRLR
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 3 LLLDRRLR 10
LLL RRLR
Sbjct: 705 LLLKRRLR 712
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 LLLDRRL 9
LLL+RRL
Sbjct: 1134 LLLNRRL 1140
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 5 LDRRLR 10
+DRRLR
Sbjct: 1707 IDRRLR 1712
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 LDRRLR 10
+DRRLR
Sbjct: 1707 IDRRLR 1712
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 5 LDRRLR 10
+DRRLR
Sbjct: 1707 IDRRLR 1712
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 LDRRLR 10
+DRRLR
Sbjct: 1707 IDRRLR 1712
>sp|US30_HCMVA|UNCHARACTERIZED protein HHRF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 LDRRLR 10
LDRRLR
Sbjct: 8 LDRRLR 13
>sp|US30_HCMVM|UNCHARACTERIZED protein US30|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 LDRRLR 10
LDRRLR
Sbjct: 8 LDRRLR 13
331|Sequence|1651|1660|DRRLRIPELE
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RLRIPEL 9
RLR+P L
Sbjct: 201 RLRVPSL 207
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RLRIPEL 9
RLR+P L
Sbjct: 201 RLRVPSL 207
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 RLRIPEL 9
RLR+P L
Sbjct: 201 RLRVPSL 207
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 RLRIPEL 9
RLR+P L
Sbjct: 201 RLRLPSL 207
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 3 RLRIPEL 9
RLR+P L
Sbjct: 201 RLRLPSL 207
332|Sequence|1656|1665|IPELEEAELF
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 PELEEAELF 10
PELEE E+F
Sbjct: 199 PELEEHEIF 207
>sp|MIR2_HHV8P|E3 ubiquitin-protein ligase MIR2|Human herpesvirus 8 type P
Query: 2 PELEEAELF 10
PE+E E+F
Sbjct: 77 PEMERQEIF 85
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 IPELEEA 7
+PEL+EA
Sbjct: 2034 LPELQEA 2040
>sp|DUT_VACCP|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain L-IVP)
Query: 2 PELEEAE 8
PELEE +
Sbjct: 123 PELEEVQ 129
>sp|DUT_VACCC|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain
Query: 2 PELEEAE 8
PELEE +
Sbjct: 123 PELEEVQ 129
>sp|DUT_VACCA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Vaccinia virus (strain Ankara)
Query: 2 PELEEAE 8
PELEE +
Sbjct: 123 PELEEVQ 129
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 2 PELEEAE 8
PELEE +
Sbjct: 127 PELEEVQ 133
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 2 PELEEAE 8
PELEE +
Sbjct: 123 PELEEVQ 129
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 IPELEEAEL 9
IP+LEE ++
Sbjct: 1338 IPQLEEIDI 1346
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 2 PELEEAEL 9
PELEEA L
Sbjct: 217 PELEEAVL 224
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 PELEEAEL 9
PE EEA+L
Sbjct: 715 PEREEAQL 722
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 PELEEAELF 10
PELE +LF
Sbjct: 63 PELEAFDLF 71
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 PELEEA 7
PE+EEA
Sbjct: 2678 PEVEEA 2683
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1264 PELEQGLLY 1272
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1262 PELEQGLLY 1270
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1264 PELEQGLLY 1272
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1264 PELEQGLLY 1272
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1264 PELEQGLLY 1272
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 IPELEEAELF 10
+PE+EE ++
Sbjct: 1090 VPEVEEEFMY 1099
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 1 IPELEEAELF 10
+PE+EE ++
Sbjct: 1090 VPEVEEEFMY 1099
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1264 PELEQGLLY 1272
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PELEEAEL 9
PE ++AEL
Sbjct: 1484 PETQKAEL 1491
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PELEEAEL 9
PE ++AEL
Sbjct: 1484 PETQKAEL 1491
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PELEEAEL 9
PE ++AEL
Sbjct: 1484 PETQKAEL 1491
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PELEEAEL 9
PE ++AEL
Sbjct: 1484 PETQKAEL 1491
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 PELEEAEL 9
PE ++AEL
Sbjct: 1484 PETQKAEL 1491
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1278 PELEQGLLY 1286
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1279 PELEQGLLY 1287
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 2 PELEEAELF 10
PELE+ L+
Sbjct: 1279 PELEQGLLY 1287
333|Sequence|1661|1670|EAELFAEGQG
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 1 EAELFAEGQ 9
EAEL+A Q
Sbjct: 425 EAELYARVQ 433
>sp|CCU83_HHV6U|PUTATIVE CC-type chemokine U83|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EAELFAE 7
+AELF+E
Sbjct: 11 DAELFSE 17
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 ELFAEGQG 10
+LF GQG
Sbjct: 563 KLFESGQG 570
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 ELFAEGQG 10
+LF GQG
Sbjct: 563 KLFESGQG 570
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 ELFAEGQG 10
+LF GQG
Sbjct: 563 KLFESGQG 570
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AELFAEGQG 10
AEL +GQG
Sbjct: 913 AELQKQGQG 921
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 AELFAEGQG 10
AEL +GQG
Sbjct: 914 AELQKQGQG 922
334|Sequence|1666|1675|AEGQGRALRL
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 AEGQGRALRL 10
AEG +ALR
Sbjct: 283 AEGNDKALRF 292
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 AEGQGRALRL 10
AEG +ALR
Sbjct: 282 AEGNDKALRF 291
>sp|TRM3_HCMVM|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 EGQGRALRL 10
EG +A+RL
Sbjct: 147 EGDAKAIRL 155
>sp|TRM3_HCMVA|TRIPARTITE terminase subunit 3|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 EGQGRALRL 10
EG +A+RL
Sbjct: 147 EGDAKAIRL 155
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 EGQGRAL 8
EG+GR L
Sbjct: 165 EGKGRVL 171
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 EGQGRAL 8
EG+GR L
Sbjct: 165 EGKGRVL 171
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 EGQGRAL 8
EG+GR L
Sbjct: 165 EGKGRVL 171
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 EGQGRAL 8
EG+GR L
Sbjct: 165 EGKGRVL 171
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 EGQGRAL 8
EG+GR L
Sbjct: 165 EGKGRVL 171
335|Sequence|1671|1680|RALRLLRAVY
>sp|REV_HV1MA|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 1 RALRLLRAVY 10
RA+RL++ +Y
Sbjct: 14 RAIRLIKILY 23
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 RALRLLRAV 9
RA++ LRAV
Sbjct: 488 RAIKSLRAV 496
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 RALRLLRAV 9
RA++ LRAV
Sbjct: 488 RAIKSLRAV 496
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 RALRLLRAV 9
RA++ LRAV
Sbjct: 488 RAIKSLRAV 496
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 RALRLLRAV 9
RA++ LRAV
Sbjct: 488 RAIKSLRAV 496
336|Sequence|1676|1685|LRAVYQCVAA
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 RAVYQCV 8
R VY+C+
Sbjct: 206 RKVYECI 212
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RAVYQCV 8
R VY+C+
Sbjct: 206 RKVYECI 212
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RAVYQCV 8
R VY+C+
Sbjct: 206 RKVYECI 212
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 2 RAVYQCV 8
R VY+C+
Sbjct: 206 RKVYECI 212
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 LRAVYQCVAA 10
L AVY+ VAA
Sbjct: 1421 LAAVYRAVAA 1430
>sp|PG162_VACCC|PROTEIN OPG162|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 AVYQC 7
AVYQC
Sbjct: 71 AVYQC 75
>sp|PG162_MONPV|PROTEIN OPG162|Monkeypox virus (MPXV)
Query: 3 AVYQC 7
AVYQC
Sbjct: 71 AVYQC 75
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LRAVYQCV 8
L +VY+CV
Sbjct: 141 LVSVYECV 148
>sp|TRX1_VZVD|TRIPLEX capsid protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRAVYQC 7
LRA+ QC
Sbjct: 242 LRAMVQC 248
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 AVYQC 7
AVYQC
Sbjct: 2668 AVYQC 2672
>sp|HEPA_HHV11|DNA helicase/primase complex-associated protein|Human herpesvirus 1
Query: 2 RAVYQCVAA 10
RA+Y CV A
Sbjct: 99 RALYACVLA 107
>sp|HEPA_HHV2H|DNA helicase/primase complex-associated protein|Human herpesvirus 2
Query: 2 RAVYQCVAA 10
RA+Y CV A
Sbjct: 99 RALYACVLA 107
>sp|VP9P_CTFVL|NON structural protein VP9'|Colorado tick fever virus (strain
Query: 1 LRAVYQCV 8
LRA Y C+
Sbjct: 370 LRAFYGCL 377
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 AVYQC 7
A+YQC
Sbjct: 2658 AIYQC 2662
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 AVYQC 7
A+YQC
Sbjct: 2658 AIYQC 2662
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 3 AVYQC 7
A+YQC
Sbjct: 2658 AIYQC 2662
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 3 AVYQCVAA 10
+VY CV A
Sbjct: 708 SVYMCVVA 715
337|Sequence|1681|1690|QCVAAHSELL
>sp|UL96_HCMVM|PROTEIN UL96|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QCVAAH 6
QCVAAH
Sbjct: 60 QCVAAH 65
>sp|UL96_HCMVA|PROTEIN UL96|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QCVAAH 6
QCVAAH
Sbjct: 60 QCVAAH 65
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QCVAAHSELL 10
QCV H+++L
Sbjct: 3890 QCVQLHNDIL 3899
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QCVAAHSELL 10
QCV H+++L
Sbjct: 3890 QCVQLHNDIL 3899
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QCVAAHSELL 10
QCV H+++L
Sbjct: 3867 QCVQLHNDIL 3876
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QCVAAHSELL 10
QCV H+++L
Sbjct: 3867 QCVQLHNDIL 3876
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 1 QCVAAHSE 8
+C+AAH E
Sbjct: 300 ECLAAHPE 307
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 CVAAHSE 8
C++AH E
Sbjct: 634 CISAHQE 640
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 CVAAHSELL 10
CV H EL+
Sbjct: 1415 CVEWHPELM 1423
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QCVAAHSEL 9
QC HS++
Sbjct: 2880 QCYTPHSQI 2888
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QCVAAHSEL 9
QC HS++
Sbjct: 2880 QCYTPHSQI 2888
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 CVAAHSELL 10
CV H+++L
Sbjct: 3877 CVKCHNDIL 3885
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 CVAAHSELL 10
CV H+++L
Sbjct: 3877 CVKCHNDIL 3885
>sp|VE6_HPV63|PROTEIN E6|Human papillomavirus type 63
Query: 1 QCVAAHSELL 10
QC A H LL
Sbjct: 61 QCCARHVSLL 70
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 2 CVAAHSEL 9
C+ H EL
Sbjct: 251 CIVYHKEL 258
>sp|L_HRSV|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus
Query: 2 CVAAHSEL 9
C+ H EL
Sbjct: 251 CIVYHKEL 258
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 1 QCVAAHSEL 9
+C+A H+ +
Sbjct: 394 ECIARHTHV 402
>sp|RDRP_ROTH7|RNA-DIRECTED RNA polymerase|Rotavirus A (isolate RVA/Human/United
Query: 1 QCVAAHSELL 10
+CV HS+ L
Sbjct: 37 RCVEFHSKCL 46
338|Sequence|1686|1695|HSELLCYFII
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 LLCYFII 10
++CYFI+
Sbjct: 558 IVCYFIV 564
>sp|PG147_VACCC|VIRION membrane protein OPG147|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 LLCYFII 10
+LCYFI+
Sbjct: 7 ILCYFIL 13
>sp|A21_VACCA|VIRION membrane protein A21|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LLCYFII 10
+LCYFI+
Sbjct: 7 ILCYFIL 13
>sp|PG147_VARV|VIRION membrane protein OPG147|Variola virus
Query: 4 LLCYFII 10
+LCYFI+
Sbjct: 7 ILCYFIL 13
>sp|PG147_VAR67|VIRION membrane protein OPG147|Variola virus (isolate
Query: 4 LLCYFII 10
+LCYFI+
Sbjct: 7 ILCYFIL 13
>sp|PG147_MONPV|VIRION membrane protein OPG147|Monkeypox virus (MPXV)
Query: 4 LLCYFII 10
+LCYFI+
Sbjct: 7 ILCYFIL 13
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 HSELLCY 7
H E LCY
Sbjct: 1225 HREQLCY 1231
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 HSELLCY 7
H E LCY
Sbjct: 1225 HREQLCY 1231
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 LLCYFII 10
++CYF++
Sbjct: 558 IVCYFMV 564
>sp|EBNA1_EBVB9|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 LLCYFII 10
++CYF++
Sbjct: 558 IVCYFMV 564
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 3 ELLCYFII 10
E CYF++
Sbjct: 42 ETECYFVV 49
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 HSELLCYF 8
H E CYF
Sbjct: 915 HVEAKCYF 922
>sp|RUVV_VARV|RESOLVASE OPG149|Variola virus
Query: 2 SELLCYFII 10
SE++C F I
Sbjct: 23 SEIICAFDI 31
>sp|RUVV_VAR67|RESOLVASE OPG149|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 SELLCYFII 10
SE++C F I
Sbjct: 23 SEIICAFDI 31
>sp|RUVV_VACCC|RESOLVASE OPG149|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 SELLCYFII 10
SE++C F I
Sbjct: 12 SEIICAFDI 20
>sp|RUVV_VACCA|HOLLIDAY junction resolvase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 SELLCYFII 10
SE++C F I
Sbjct: 23 SEIICAFDI 31
>sp|RUVV_MONPV|RESOLVASE OPG149|Monkeypox virus (MPXV)
Query: 2 SELLCYFII 10
SE++C F I
Sbjct: 23 SEIICAFDI 31
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 6 CYFII 10
CYF++
Sbjct: 190 CYFLV 194
>sp|A18_VACCT|TRANSCRIPT termination protein A18|Vaccinia virus (strain Tian Tan)
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|PG145_VACCC|TRANSCRIPT termination protein OPG145|Vaccinia virus (strain Copenhagen)
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 SELLCYFI 9
SEL CY I
Sbjct: 568 SELGCYTI 575
>sp|PG145_MONPV|TRANSCRIPT termination protein OPG145|Monkeypox virus (MPXV)
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|A18_CWPXG|TRANSCRIPT termination protein A18|Cowpox virus (strain GRI-90 /
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|A18_CWPXB|TRANSCRIPT termination protein A18|Cowpox virus (strain Brighton Red)
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 4 LLCYFI 9
++CYF+
Sbjct: 229 MMCYFL 234
339|Sequence|1691|1700|CYFIIILNHM
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 CYFIIILNH 9
CY ++ L H
Sbjct: 1849 CYILLTLGH 1857
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 1 CYFIIILNHM 10
C+FI +H+
Sbjct: 571 CFFIKFASHL 580
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CYFIIILNH 9
C+ I+ +NH
Sbjct: 544 CFHIVEINH 552
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CYFIIILNH 9
C+ I+ +NH
Sbjct: 544 CFHIVEINH 552
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CYFIIILNH 9
C+ I+ +NH
Sbjct: 544 CFHIVEINH 552
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CYFIIILNH 9
C+ I+ +NH
Sbjct: 544 CFHIVEINH 552
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CYFIIILNH 9
C+ I+ +NH
Sbjct: 544 CFHIVEINH 552
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 1 CYFIIILNH 9
C+ I+ +NH
Sbjct: 544 CFHIVEINH 552
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 2 YFIIILNH 9
YF+ I+N+
Sbjct: 358 YFVCIMNY 365
340|Sequence|1696|1705|ILNHMVTASA
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 ILNHMVTASA 10
+LNH+V+AS
Sbjct: 431 LLNHVVSASG 440
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 ILNHMVTA 8
+LNH+V++
Sbjct: 415 LLNHVVSS 422
341|Sequence|1701|1710|VTASAGSLVL
>sp|K6_HHV8P|PROTEIN K6|Human herpesvirus 8 type P
Query: 2 TASAGSLV 9
T SAGSLV
Sbjct: 22 TESAGSLV 29
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 VTASAGSLV 9
VTAS GS++
Sbjct: 17 VTASNGSVI 25
342|Sequence|1706|1715|GSLVLPVLVF
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 2 SLVLPVL 8
SL+LPV+
Sbjct: 111 SLILPVM 117
>sp|ORF50_HHV8P|REPLICATION and transcription activator|Human herpesvirus 8 type P
Query: 2 SLVLPVL 8
SL+LP+L
Sbjct: 258 SLILPIL 264
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GSLVLPVLVF 10
GSL + V+VF
Sbjct: 2534 GSLPINVIVF 2543
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 GSLVLPVLVF 10
GSL + V+VF
Sbjct: 2511 GSLPINVIVF 2520
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GSLVLPVLVF 10
GSL + V+VF
Sbjct: 2511 GSLPINVIVF 2520
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 GSLVLPVLVF 10
GSL + V+VF
Sbjct: 2534 GSLPINVIVF 2543
>sp|PG172_VARV|PROTEIN A43|Variola virus
Query: 4 VLPVLVF 10
++PVLV+
Sbjct: 14 IMPVLVY 20
>sp|PG172_VAR67|PROTEIN A43|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 VLPVLVF 10
++PVLV+
Sbjct: 14 IMPVLVY 20
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 5 LPVLVF 10
LPVLVF
Sbjct: 312 LPVLVF 317
343|Sequence|1711|1720|PVLVFLWAML
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 LVFLWA 8
L+FLWA
Sbjct: 2201 LIFLWA 2206
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 1 PVLVFLWA 8
P+L FL+A
Sbjct: 297 PILRFLYA 304
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 PVLVFLWA 8
P+L FL+A
Sbjct: 296 PILRFLYA 303
>sp|UL20_HHV11|PROTEIN UL20|Human herpesvirus 1 (strain 17)
Query: 2 VLVFLWAML 10
V++FLW+ L
Sbjct: 64 VILFLWSFL 72
>sp|PB1F2_I34A1|PROTEIN PB1-F2|Influenza A virus (strain A/Puerto
Query: 1 PVLVFL 6
P+LVFL
Sbjct: 67 PILVFL 72
344|Sequence|1716|1725|LWAMLSIPRP
>sp|PHOSP_LBV|PHOSPHOPROTEIN bat virus (LBV)
Query: 5 LSIPRP 10
LS+PRP
Sbjct: 151 LSVPRP 156
>sp|UL141_HCMVM|PROTEIN UL141|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LWAMLSIPR 9
W +LS PR
Sbjct: 14 FWVLLSCPR 22
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 LWAMLSIP 8
+W LSIP
Sbjct: 247 VWTPLSIP 254
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 LWAMLSIP 8
+W LSIP
Sbjct: 247 VWTPLSIP 254
>sp|RNB_HHV2H|PROBABLE RNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 LWAMLSIPRP 10
+ A LSIP+P
Sbjct: 71 VCAALSIPKP 80
>sp|BILF1_EBVB9|G-PROTEIN coupled receptor BILF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 WAMLSIP 8
W MLS+P
Sbjct: 238 WFMLSLP 244
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 WAMLSI 7
WA+LSI
Sbjct: 433 WALLSI 438
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 LWAMLSI 7
LW M+SI
Sbjct: 752 LWTMISI 758
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 2 WAMLSI 7
WA+LSI
Sbjct: 434 WALLSI 439
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 LWAMLSI 7
LW M+SI
Sbjct: 752 LWTMISI 758
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 LWAMLSI 7
LW M+SI
Sbjct: 752 LWTMISI 758
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 LWAMLSIPRP 10
LW+ PRP
Sbjct: 2276 LWSEREEPRP 2285
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 LWAMLSIPRP 10
LW+ PRP
Sbjct: 2276 LWSEREEPRP 2285
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 LWAMLSIP 8
+W+ L++P
Sbjct: 217 VWSALTVP 224
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 5 LSIPRP 10
LS+PRP
Sbjct: 575 LSVPRP 580
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 WAMLSIPRP 10
WA+LS+ P
Sbjct: 166 WAVLSVMVP 174
>sp|U22_HHV6U|GLYCOPROTEIN U22|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 WAMLSIP 8
W M S+P
Sbjct: 59 WRMASVP 65
345|Sequence|1721|1730|SIPRPSKRFW
>sp|DR1_HHV6Z|UNCHARACTERIZED protein DR1|Human herpesvirus 6B (strain Z29)
Query: 1 SIPRPSKRFW 10
S+PRP R W
Sbjct: 576 SVPRPDPRVW 585
>sp|PG145_VARV|TRANSCRIPT termination protein OPG145|Variola virus
Query: 1 SIPRPSKRFW 10
+ PRPS R +
Sbjct: 236 ATPRPSNRIY 245
>sp|PG145_VAR67|TRANSCRIPT termination protein OPG145|Variola virus (isolate
Query: 1 SIPRPSKRFW 10
+ PRPS R +
Sbjct: 236 ATPRPSNRIY 245
>sp|A18_VACCA|TRANSCRIPT termination protein A18|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SIPRPSKRFW 10
+ PRPS R +
Sbjct: 236 ATPRPSNRIY 245
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 SIPRPSKRFW 10
SIP+PS R++
Sbjct: 404 SIPKPSVRYF 413
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 5 PSKRFW 10
P KR+W
Sbjct: 418 PKKRYW 423
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PSKRFW 10
P KRFW
Sbjct: 668 PPKRFW 673
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PSKRFW 10
P KRFW
Sbjct: 668 PPKRFW 673
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PSKRFW 10
P KRFW
Sbjct: 668 PPKRFW 673
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PSKRFW 10
P KRFW
Sbjct: 668 PPKRFW 673
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 5 PSKRFW 10
P KR+W
Sbjct: 434 PKKRYW 439
>sp|PHOSP_LBV|PHOSPHOPROTEIN bat virus (LBV)
Query: 1 SIPRPSKRF 9
S+PRPS+ +
Sbjct: 152 SVPRPSQGY 160
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 RPSKRFW 10
RP++ FW
Sbjct: 627 RPNRSFW 633
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 5 PSKRFW 10
P KRFW
Sbjct: 667 PPKRFW 672
>sp|NSP2_ROTGA|NON-STRUCTURAL protein 2|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 3 PRPSKRF 9
P PS+RF
Sbjct: 61 PSPSRRF 67
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 4 RPSKRFW 10
+PSK +W
Sbjct: 369 KPSKPYW 375
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 4 RPSKRFW 10
+PSK +W
Sbjct: 369 KPSKPYW 375
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 PRPSKRFW 10
PRP+ R W
Sbjct: 16 PRPAYRPW 23
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 4 RPSKRFW 10
+PSK +W
Sbjct: 369 KPSKPYW 375
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 RPSKRFW 10
RP++ FW
Sbjct: 627 RPNRSFW 633
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 RPSKRFW 10
RP++ FW
Sbjct: 627 RPNRSFW 633
>sp|VP35_MABVM|POLYMERASE cofactor VP35|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 SIPRPSKR 8
++PRPS++
Sbjct: 291 TVPRPSQK 298
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 4 RPSKRFW 10
+PSK +W
Sbjct: 369 KPSKPYW 375
>sp|PG038_VARV|EARLY protein OPG038|Variola virus
Query: 3 PRPSKRFW 10
PR R+W
Sbjct: 27 PRQDYRYW 34
>sp|PG038_VAR67|EARLY protein OPG038|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 PRPSKRFW 10
PR R+W
Sbjct: 27 PRQDYRYW 34
>sp|PG038_VACCC|EARLY protein OPG038|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PRPSKRFW 10
PR R+W
Sbjct: 27 PRQDYRYW 34
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 2 IPRPSKRFW 10
I RP+ FW
Sbjct: 201 IIRPAISFW 209
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 2 IPRPSKRFW 10
I RP+ FW
Sbjct: 201 IIRPAISFW 209
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IPRPSKRFW 10
I RP+ FW
Sbjct: 201 IIRPAISFW 209
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IPRPSKRFW 10
I RP+ FW
Sbjct: 201 IIRPAISFW 209
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 2 IPRPSKRFW 10
I RP+ FW
Sbjct: 201 IIRPAISFW 209
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SIPRPSKRFW 10
S+P P R W
Sbjct: 445 SVPGPDPRLW 454
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SIPRPSKRFW 10
SI PS FW
Sbjct: 3 SIINPSDDFW 12
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SIPRPSKRFW 10
S+P P R W
Sbjct: 514 SVPGPDPRLW 523
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 1 SIPRPSKRFW 10
SI PS FW
Sbjct: 3 SIINPSDDFW 12
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 1 SIPRPSKRFW 10
SI PS FW
Sbjct: 3 SIINPSDDFW 12
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 3 PRPSKRFW 10
PRP+ R W
Sbjct: 16 PRPAFRPW 23
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SIPRPSKRFW 10
S+P P RF+
Sbjct: 934 SLPVPFHRFY 943
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SIPRPSKRFW 10
S+P P RF+
Sbjct: 934 SLPVPFHRFY 943
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 3 PRPSKRFW 10
PRP+ R W
Sbjct: 16 PRPAFRPW 23
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 3 PRPSKRFW 10
PRP+ R W
Sbjct: 16 PRPAFRPW 23
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 1 SIPRPSK 7
+IP PSK
Sbjct: 469 NIPTPSK 475
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 SIPRPSKR 8
++P+P KR
Sbjct: 3 TLPKPQKR 10
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 IPRPSKRFW 10
+ PS R W
Sbjct: 716 VENPSNRVW 724
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 IPRPSK 7
IP PSK
Sbjct: 78 IPNPSK 83
>sp|U24A_HHV6Z|UNCHARACTERIZED protein U24A|Human herpesvirus 6B (strain Z29)
Query: 2 IPRPSKRFW 10
IPR ++ W
Sbjct: 11 IPRSAEELW 19
>sp|GP350_EBVG|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PRPSKRF 9
PRP RF
Sbjct: 268 PRPVSRF 274
>sp|VGP3_EBVP3|ENVELOPE glycoprotein GP340|Epstein-Barr virus (strain P3HR-1) (HHV-4)
Query: 3 PRPSKRF 9
PRP RF
Sbjct: 268 PRPVSRF 274
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 IPRPSKRF 9
I RP+K+F
Sbjct: 2271 ILRPTKKF 2278
>sp|GP350_EBVA8|ENVELOPE glycoprotein GP350|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PRPSKRF 9
PRP RF
Sbjct: 268 PRPVSRF 274
346|Sequence|1726|1735|SKRFWMTAIV
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 4 FWMTAI 9
FW+TAI
Sbjct: 3115 FWITAI 3120
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 FWMTAI 9
FW+TAI
Sbjct: 3115 FWITAI 3120
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 4 FWMTAIV 10
FW+ AI+
Sbjct: 766 FWLQAII 772
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 KRFWMTAIV 10
KRFW T V
Sbjct: 60 KRFWATVPV 68
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 KRFWMTAIV 10
KRFW T V
Sbjct: 60 KRFWATVPV 68
>sp|C8_VACCC|PROTEIN C8|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KRFWMTAI 9
K FW+T +
Sbjct: 68 KNFWITVM 75
>sp|VE2_HPV55|REGULATORY protein E2|Human papillomavirus type 55
Query: 1 SKRFWMTA 8
S+ W+TA
Sbjct: 98 SREMWLTA 105
347|Sequence|1731|1740|MTAIVFTEIA
>sp|NCAP_ANDV|NUCLEOPROTEIN orthohantavirus (ANDV) (Andes virus)
Query: 2 TAIVFTEIA 10
+A +FTEIA
Sbjct: 291 SATLFTEIA 299
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 AIVFTE 8
A+VFTE
Sbjct: 148 AVVFTE 153
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 AIVFTE 8
A+VFTE
Sbjct: 148 AVVFTE 153
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 AIVFTE 8
A+VFTE
Sbjct: 148 AVVFTE 153
348|Sequence|1736|1745|FTEIAVVVKY
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 TEIAVVVKY 10
TE+AVV Y
Sbjct: 338 TELAVVRSY 346
349|Sequence|1741|1750|VVVKYLFQFG
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 5 YLFQFG 10
YLFQ+G
Sbjct: 316 YLFQYG 321
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 5 YLFQFG 10
YLFQ+G
Sbjct: 316 YLFQYG 321
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 5 YLFQFG 10
YLFQ+G
Sbjct: 315 YLFQYG 320
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 VVVKYLFQFG 10
VV++YL FG
Sbjct: 114 VVLEYLVSFG 123
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 4 KYLFQFG 10
+YL+Q+G
Sbjct: 476 RYLYQYG 482
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VIEYLVSFG 152
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VIEYLVSFG 152
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VIEYLVSFG 123
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VIEYLVSFG 123
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VIEYLVSFG 123
>sp|VL1_HPV23|MAJOR capsid protein L1|Human papillomavirus 23
Query: 4 KYLFQFG 10
K+LFQ G
Sbjct: 473 KFLFQIG 479
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VIEYLVAFG 152
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VIEYLVAFG 123
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 VVVKYLFQFG 10
+V++YL FG
Sbjct: 143 LVLEYLVSFG 152
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 1 VVVKYLFQFG 10
+V++YL FG
Sbjct: 114 LVLEYLVSFG 123
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 291 VLEYLVSFG 299
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 144 VLEYLVSFG 152
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 127 VLEYLVSFG 135
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 127 VLEYLVSFG 135
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 127 VLEYLVSFG 135
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA4|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 2 VVKYLFQFG 10
V++YL FG
Sbjct: 115 VLEYLVSFG 123
>sp|REV_HV1BN|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 2 VVKYLFQ 8
V+K+L+Q
Sbjct: 8 VIKFLYQ 14
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 VVVKYLFQ 8
V VKYLF+
Sbjct: 34 VYVKYLFK 41
350|Sequence|1746|1755|LFQFGFFPWN
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 LFQFGFFP 8
LFQ+G+ P
Sbjct: 316 LFQYGYIP 323
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 LFQFGFFP 8
LFQ+G+ P
Sbjct: 316 LFQYGYIP 323
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 LFQFGFFP 8
LFQ+G+ P
Sbjct: 317 LFQYGYIP 324
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 LFQFGFFP 8
LFQ+G+ P
Sbjct: 317 LFQYGYIP 324
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 4 FGFFPW 9
+GF PW
Sbjct: 628 YGFEPW 633
>sp|VE2_HPV14|REGULATORY protein E2|Human papillomavirus 14
Query: 3 QFGFFPWN 10
QFG PW+
Sbjct: 86 QFGSEPWS 93
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 4 FGFFPW 9
FG +PW
Sbjct: 735 FGLWPW 740
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 3 QFGFFPW 9
+FG PW
Sbjct: 86 EFGMEPW 92
>sp|VE2_HPV11|REGULATORY protein E2|Human papillomavirus 11
Query: 3 QFGFFPW 9
Q+G PW
Sbjct: 86 QYGVEPW 92
>sp|UL106_HCMVA|UNCHARACTERIZED protein UL106|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 GFFPWN 10
GFF W+
Sbjct: 34 GFFSWS 39
>sp|GLYC_PIARV|PRE-GLYCOPROTEIN polyprotein GP complex|Pichinde mammarenavirus (PICV) (Pichind
Query: 4 FGFFPWN 10
GFF W+
Sbjct: 273 LGFFTWD 279
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 QFGFFPWN 10
+FGF P N
Sbjct: 2560 KFGFTPLN 2567
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 3 QFGFFPWN 10
+FGF P N
Sbjct: 2560 KFGFTPLN 2567
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 3 QFGFFPWN 10
Q G+F W+
Sbjct: 386 QKGYFKWS 393
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 4 FGFFPW 9
GF PW
Sbjct: 431 LGFGPW 436
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 3 QFGFFPW 9
+FG F W
Sbjct: 344 EFGTFDW 350
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 3 QFGFFPWN 10
+FG PW+
Sbjct: 86 EFGKEPWS 93
>sp|ICP22_HHV11|TRANSCRIPTIONAL regulator ICP22|Human herpesvirus 1 (strain 17)
Query: 3 QFGFFPW 9
+FG F W
Sbjct: 351 EFGEFDW 357
>sp|SH_MUMP4|SMALL hydrophobic protein|Mumps virus (strain Edingburgh 4)
Query: 1 LFQFGFFPWN 10
L+Q FF W+
Sbjct: 43 LYQRSFFRWS 52
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 FGFFP 8
+GFFP
Sbjct: 232 YGFFP 236
>sp|SH_MUMP6|SMALL hydrophobic protein|Mumps virus (strain Edingburgh 6)
Query: 1 LFQFGFFPWN 10
L+Q FF W+
Sbjct: 43 LYQRSFFRWS 52
>sp|SH_MUMP2|SMALL hydrophobic protein|Mumps virus (strain Edingburgh 2)
Query: 1 LFQFGFFPWN 10
L+Q FF W+
Sbjct: 43 LYQRSFFRWS 52
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 FGFFP 8
+GFFP
Sbjct: 232 YGFFP 236
351|Sequence|1751|1760|FFPWNSHVVL
>sp|ENV_HV1MA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 FFPWNS 6
F PWNS
Sbjct: 609 FVPWNS 614
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 1 FFPWNS 6
FFPW S
Sbjct: 879 FFPWPS 884
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b
Query: 1 FFPWNS 6
FFPW S
Sbjct: 879 FFPWPS 884
>sp|BMRF2_EBVG|PROTEIN BMRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FFPWNSHV 8
F PW +HV
Sbjct: 40 FSPWQTHV 47
>sp|BMRF2_EBVB9|PROTEIN BMRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FFPWNSHV 8
F PW +HV
Sbjct: 40 FSPWQTHV 47
>sp|BMRF2_EBVA8|PROTEIN BMRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FFPWNSHV 8
F PW +HV
Sbjct: 40 FSPWQTHV 47
>sp|EBNA6_EBVG|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FFPWNS 6
++PWN+
Sbjct: 316 YYPWNA 321
>sp|EBNA6_EBVB9|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FFPWNS 6
++PWN+
Sbjct: 316 YYPWNA 321
>sp|EBNA6_EBVA8|EPSTEIN-BARR nuclear antigen 6|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FFPWNS 6
++PWN+
Sbjct: 316 YYPWNA 321
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 1 FFPWNSHVVL 10
FF W+S+ L
Sbjct: 102 FFQWDSNTQL 111
>sp|VU8_HHV6Z|PROTEIN U8|Human herpesvirus 6B (strain Z29)
Query: 1 FFPWNSHV 8
FFP + HV
Sbjct: 23 FFPISCHV 30
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 2 FPWNSHV 8
FP+ +HV
Sbjct: 819 FPYKAHV 825
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 FFPWNSH 7
FFP SH
Sbjct: 266 FFPIGSH 272
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 FFPWNSH 7
FFP SH
Sbjct: 266 FFPIGSH 272
>sp|PG044_VACCC|PROTEIN K7|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 FFPWNSHVVL 10
+ W +HV++
Sbjct: 33 YITWRNHVIV 42
>sp|PG044_VACCA|PROTEIN K7|Vaccinia virus (strain Ankara) (VACV)
Query: 1 FFPWNSHVVL 10
+ W +HV++
Sbjct: 33 YITWRNHVIV 42
>sp|PG044_MONPV|PROTEIN K7|Monkeypox virus (MPXV)
Query: 1 FFPWNSHVVL 10
+ W +HV++
Sbjct: 33 YITWRNHVIV 42
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 FFPWNSH 7
FFP SH
Sbjct: 257 FFPIGSH 263
>sp|UL87_HHV7J|PROTEIN U58|Human herpesvirus 7 (strain JI)
Query: 4 WNSHV 8
WNSH+
Sbjct: 154 WNSHL 158
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 FFPWNSH 7
FFP SH
Sbjct: 261 FFPIGSH 267
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 2 FPWNSHV 8
FP+ +H+
Sbjct: 828 FPYKAHI 834
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 FFPWNSH 7
FFP SH
Sbjct: 130 FFPIGSH 136
>sp|POLS_SAGV|STRUCTURAL polyprotein|Sagiyama virus (SAGV)
Query: 2 FPWNSHV 8
FP+ +H+
Sbjct: 828 FPYKAHI 834
>sp|POLS_RRVN|STRUCTURAL polyprotein|Ross river virus (strain NB5092)
Query: 2 FPWNSHV 8
FP+ +H+
Sbjct: 829 FPYKAHI 835
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 FFPWNSH 7
FFP SH
Sbjct: 191 FFPIGSH 197
>sp|POLS_RRVT|STRUCTURAL polyprotein|Ross river virus (strain T48)
Query: 2 FPWNSHV 8
FP+ +H+
Sbjct: 829 FPYKAHI 835
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 FPWNSHV 8
FP+ +H+
Sbjct: 828 FPYKAHI 834
>sp|U10_HHV6Z|PROTEIN U10|Human herpesvirus 6B (strain Z29)
Query: 1 FFPWNSHVVL 10
F+P H+V+
Sbjct: 365 FYPSRCHIVI 374
>sp|U10_HHV6H|PROTEIN U10|Human herpesvirus 6B (HHV-6 variant
Query: 1 FFPWNSHVVL 10
F+P H+V+
Sbjct: 365 FYPSRCHIVI 374
>sp|U10_HHV6U|U10 protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 FFPWNSHVVL 10
F+P H+V+
Sbjct: 365 FYPSRCHIVI 374
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 1 FFPWNSHVV 9
+P+ HVV
Sbjct: 81 LYPFQKHVV 89
>sp|PRO_ADE05|PROTEASE adenovirus C serotype 5
Query: 2 FPWNSH 7
F WN H
Sbjct: 58 FAWNPH 63
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 FPWNSH 7
FP+N H
Sbjct: 1751 FPFNPH 1756
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 4 WNSHVVL 10
WN+ VVL
Sbjct: 79 WNAIVVL 85
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 WNSHVVL 10
WN+ VVL
Sbjct: 79 WNAIVVL 85
352|Sequence|1756|1765|SHVVLRRYEN
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 SHVVLRRYE 9
SH++LRR E
Sbjct: 1547 SHLLLRRVE 1555
>sp|VP7_ROTKU|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 HVVLRRYEN 10
+VVL RY+N
Sbjct: 138 NVVLMRYDN 146
>sp|VP7_ROTHS|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 HVVLRRYEN 10
+VVL RY+N
Sbjct: 138 NVVLMRYDN 146
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 2 HVVLRRYEN 10
+VVL RY+N
Sbjct: 138 NVVLMRYDN 146
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 2 HVVLRRYEN 10
+VVL RY+N
Sbjct: 138 NVVLMRYDN 146
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 2 HVVLRRYEN 10
+VVL RY+N
Sbjct: 138 NVVLMRYDN 146
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SHVVLR 6
SHVVLR
Sbjct: 425 SHVVLR 430
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SHVVLR 6
SHVVLR
Sbjct: 425 SHVVLR 430
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SHVVLR 6
SHVVLR
Sbjct: 425 SHVVLR 430
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 5 LRRYEN 10
LRRYE+
Sbjct: 3416 LRRYED 3421
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 5 LRRYEN 10
LRRYE+
Sbjct: 3418 LRRYED 3423
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 5 LRRYEN 10
LRRYE+
Sbjct: 3418 LRRYED 3423
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 5 LRRYEN 10
LRRYE+
Sbjct: 3418 LRRYED 3423
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 5 LRRYEN 10
LRRYE+
Sbjct: 3418 LRRYED 3423
>sp|UL88_HCMVM|PROTEIN UL88|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 HVVLRRY 8
+VVLRRY
Sbjct: 365 NVVLRRY 371
>sp|UL88_HCMVA|PROTEIN UL88|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 HVVLRRY 8
+VVLRRY
Sbjct: 365 NVVLRRY 371
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 5 LRRYEN 10
LRRYE+
Sbjct: 20 LRRYES 25
353|Sequence|1761|1770|RRYENKPYFP
>sp|POLS_CHIKS|STRUCTURAL polyprotein|Chikungunya virus (strain S27-African prototype)
Query: 1 RRYENKPYFP 10
RRY+ +P+ P
Sbjct: 12 RRYQPRPWTP 21
>sp|POLS_CHIK3|STRUCTURAL polyprotein|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 RRYENKPYFP 10
RRY+ +P+ P
Sbjct: 12 RRYQPRPWAP 21
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 1 RRYENKPYFP 10
RRY+ +P+ P
Sbjct: 12 RRYQPRPWTP 21
>sp|POLSF_CHIKS|FRAMESHIFTED structural polyprotein|Chikungunya virus (strain S27-African
Query: 1 RRYENKPYFP 10
RRY+ +P+ P
Sbjct: 12 RRYQPRPWTP 21
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 RRYENKPYF 9
R Y NK YF
Sbjct: 354 RSYMNKTYF 362
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 2 RYENKPYF 9
RYE KP +
Sbjct: 1104 RYEGKPLY 1111
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 RRYENKPY 8
RRY + PY
Sbjct: 1392 RRYYSTPY 1399
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 YENKPYFP 10
Y+N Y+P
Sbjct: 805 YDNYAYYP 812
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 YENKPYFP 10
Y+N Y+P
Sbjct: 805 YDNYAYYP 812
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 YENKPYFP 10
Y+N Y+P
Sbjct: 805 YDNYAYYP 812
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 YENKPYFP 10
Y+N Y+P
Sbjct: 805 YDNYAYYP 812
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 3 YENKPYFP 10
Y+N Y+P
Sbjct: 805 YDNYAYYP 812
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 2 RYENKPYF 9
+ ENKPY+
Sbjct: 328 KTENKPYW 335
>sp|PG025_MONPV|ANKYRIN repeat protein OPG025|Monkeypox virus (MPXV)
Query: 1 RRYENKPYF 9
+RY N P F
Sbjct: 563 KRYVNNPIF 571
>sp|LRP1_HHV1F|LATENCY-RELATED protein 1|Human herpesvirus 1 (strain F)
Query: 1 RRYENKPYFP 10
+RY++KP FP
Sbjct: 84 KRYKSKPLFP 93
>sp|POLS_ONNVG|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 RRYENKPY 8
RRY+ +P+
Sbjct: 12 RRYQPRPW 19
>sp|POLS_ONNVI|STRUCTURAL polyprotein|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 RRYENKPY 8
RRY+ +P+
Sbjct: 12 RRYQPRPW 19
>sp|PG025_VACCC|ANKYRIN repeat protein OPG025|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RRYENKPYF 9
+RY N P F
Sbjct: 567 KRYVNNPIF 575
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 YENKPYFP 10
YE PY P
Sbjct: 138 YERIPYRP 145
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 RRYENKPY 8
RRY+ +P+
Sbjct: 12 RRYQPRPW 19
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 2 RYENKPY 8
RY KPY
Sbjct: 290 RYRLKPY 296
>sp|VL1_HPV22|MAJOR capsid protein L1|Human papillomavirus 22
Query: 4 ENKPYFP 10
EN YFP
Sbjct: 293 ENSTYFP 299
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 3 YENKPYFP 10
+ENK FP
Sbjct: 314 FENKLIFP 321
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 YENKPYFP 10
YE PY P
Sbjct: 139 YERIPYRP 146
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 3 YENKPYFP 10
+ENK FP
Sbjct: 314 FENKLIFP 321
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 3 YENKPYFP 10
+ENK FP
Sbjct: 314 FENKLIFP 321
>sp|HEPA_HHV7J|DNA helicase/primase complex-associated protein|Human herpesvirus 7
Query: 2 RYENK 6
RYENK
Sbjct: 560 RYENK 564
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 3 YENKPYFP 10
+ENK FP
Sbjct: 314 FENKLIFP 321
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 4 ENKPY 8
+NKPY
Sbjct: 6406 DNKPY 6410
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 RRYENKPYFP 10
+RYE Y+P
Sbjct: 146 QRYELARYWP 155
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 3 YENKPYFP 10
+ENK FP
Sbjct: 314 FENKLIFP 321
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 2 RYENKPYF 9
++ +KPYF
Sbjct: 816 KHWDKPYF 823
>sp|VE8E2_HPV33|PROTEIN E8^E2C|Human papillomavirus 33
Query: 2 RYENKPY 8
RY KPY
Sbjct: 99 RYRLKPY 105
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 1 RRYENKPYFP 10
R Y+N+ FP
Sbjct: 87 RTYKNELTFP 96
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 RYENKPYF 9
++ +KPYF
Sbjct: 816 KHWDKPYF 823
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 2 RYENKPYF 9
++ +KPYF
Sbjct: 816 KHWDKPYF 823
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 RYENKPYF 9
++ +KPYF
Sbjct: 815 KHWDKPYF 822
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 RYENKPYF 9
++ +KPYF
Sbjct: 815 KHWDKPYF 822
354|Sequence|1766|1775|KPYFPPRILG
>sp|CAPSP_ADE12|PENTON protein|Human adenovirus A serotype 12
Query: 2 PYFPPRILG 10
PY PPR LG
Sbjct: 29 PYVPPRYLG 37
>sp|U78_HHV6U|UNCHARACTERIZED protein U78|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FPPRILG 10
FPPR+ G
Sbjct: 22 FPPRLCG 28
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 1 KPYFPP 6
KPYF P
Sbjct: 237 KPYFKP 242
>sp|NS1_I77A9|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/New
Query: 1 KPYFPPR 7
+P FPP+
Sbjct: 211 RPSFPPK 217
>sp|NS1_I73A4|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 KPYFPPR 7
+P FPP+
Sbjct: 211 RPSFPPK 217
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 3 YFPPRI 8
Y+PP+I
Sbjct: 223 YYPPKI 228
>sp|KITH_HHV8P|THYMIDINE kinase|Human herpesvirus 8 type P
Query: 2 PYFPPRIL 9
P FPPR L
Sbjct: 88 PRFPPRPL 95
>sp|PG074_VAR67|PROTEIN OPG074|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 3 YFPPRIL 9
+FPP I+
Sbjct: 60 FFPPEII 66
>sp|PG074_VACCC|PROTEIN OPG074|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YFPPRIL 9
+FPP I+
Sbjct: 60 FFPPEII 66
>sp|PG074_MONPV|PROTEIN OPG074|Monkeypox virus (MPXV)
Query: 3 YFPPRIL 9
+FPP I+
Sbjct: 60 FFPPEII 66
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 3 YFPPRI 8
Y+PP++
Sbjct: 224 YYPPKV 229
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 3 YFPPRIL 9
Y PP I+
Sbjct: 556 YLPPEIM 562
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 YFPPRIL 9
Y PP I+
Sbjct: 553 YLPPEII 559
>sp|VP7_ROTHE|OUTER capsid glycoprotein VP7|Rotavirus C (isolate
Query: 3 YFPPRILG 10
YFP I+G
Sbjct: 80 YFPNAIVG 87
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 PYFPPR 7
PY+P R
Sbjct: 943 PYYPSR 948
>sp|PP85_HHV6Z|PHOSPHOPROTEIN 85|Human herpesvirus 6B (strain Z29)
Query: 2 PYFPPR 7
PY PP+
Sbjct: 480 PYSPPQ 485
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PYFPPR 7
PY PP+
Sbjct: 480 PYSPPQ 485
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 YFPPRILG 10
Y PP +LG
Sbjct: 2306 YEPPTVLG 2313
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 YFPPRILG 10
Y PP +LG
Sbjct: 2306 YEPPTVLG 2313
>sp|SPIK2_ADE40|FIBER protein 2|Human adenovirus F serotype 40
Query: 1 KPYFPP 6
KP+ PP
Sbjct: 372 KPFHPP 377
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 KPYFPPRI 8
+P FPP +
Sbjct: 2280 RPKFPPAL 2287
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 KPYFPPRI 8
+P FPP +
Sbjct: 2284 RPKFPPAL 2291
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 3 YFPPRIL 9
YF P+IL
Sbjct: 331 YFSPKIL 337
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 KPYFPPRI 8
+P FPP +
Sbjct: 2281 RPKFPPAL 2288
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 KPYFPPRI 8
+P FPP +
Sbjct: 2277 RPKFPPAL 2284
>sp|SPIK2_ADE41|FIBER protein 2|Human adenovirus F serotype 41
Query: 1 KPYFPP 6
KP+ PP
Sbjct: 372 KPFHPP 377
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PYFPPRI 8
P+FPP +
Sbjct: 608 PWFPPMV 614
>sp|EBNA1_EBVA8|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PYFPPRI 8
P+FPP +
Sbjct: 608 PWFPPMV 614
355|Sequence|1771|1780|PRILGLEKTD
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 PRILGLEKT 9
PR +G EK+
Sbjct: 451 PRFIGNEKS 459
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 PRILGLEK 8
PR+L +EK
Sbjct: 3150 PRLLRVEK 3157
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PRILGLE 7
P+++GLE
Sbjct: 558 PKLIGLE 564
>sp|POLS_MAYAB|STRUCTURAL polyprotein|Mayaro virus (strain Brazil) (MAYV)
Query: 4 LGLEKTD 10
+GL KTD
Sbjct: 378 IGLTKTD 384
>sp|UL135_HCMVT|PROTEIN UL135|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PRILGLE 7
PR +GLE
Sbjct: 241 PRTVGLE 247
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 1 PRILGLE 7
P+++GLE
Sbjct: 558 PKLIGLE 564
>sp|UL135_HCMVM|PROTEIN UL135|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PRILGLE 7
PR +GLE
Sbjct: 241 PRTVGLE 247
356|Sequence|1776|1785|LEKTDGYIKY
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 2 EKTDGYIKY 10
+ TDGY+ +
Sbjct: 666 QNTDGYVNW 674
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 2 EKTDGYIKY 10
+ TDGY+ +
Sbjct: 666 QNTDGYVNW 674
>sp|VE2_HPV70|REGULATORY protein E2|Human papillomavirus type 70
Query: 3 KTDGYIKY 10
KT+GY+ Y
Sbjct: 153 KTEGYVDY 160
>sp|NCAP_PI1HC|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 KTDGYI 8
KTDG+I
Sbjct: 114 KTDGFI 119
>sp|NCAP_PI1HW|NUCLEOPROTEIN parainfluenza 1 virus (strain
Query: 3 KTDGYI 8
KTDG+I
Sbjct: 114 KTDGFI 119
>sp|NCAP_PI1HA|NUCLEOPROTEIN parainfluenza 1 virus (strains
Query: 3 KTDGYI 8
KTDG+I
Sbjct: 114 KTDGFI 119
>sp|UL148_HCMVM|MEMBRANE protein UL148|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 TDGYIKY 10
T GY++Y
Sbjct: 258 TRGYVRY 264
>sp|U78_HHV6U|UNCHARACTERIZED protein U78|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 EKTDGYIK 9
+KT GY+K
Sbjct: 78 KKTTGYLK 85
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 1 LEKTDGYIK 9
LEK Y+K
Sbjct: 884 LEKVSKYVK 892
>sp|PG049_VACCP|PROTEIN OPG049|Vaccinia virus (strain L-IVP) (VACV)
Query: 2 EKTDGYI 8
+KT GYI
Sbjct: 58 DKTSGYI 64
357|Sequence|1781|1790|GYIKYDLVQL
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 GYIKYDLVQ 9
G +KYD++Q
Sbjct: 562 GQLKYDIIQ 570
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 YIKYDLVQ 9
YIK+DL++
Sbjct: 4657 YIKWDLLK 4664
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 1 GYIKYD 6
G+IKYD
Sbjct: 215 GWIKYD 220
>sp|PG117_VACCC|UNCOATING factor OPG117|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GYIKYDLV 8
GYI YD V
Sbjct: 724 GYILYDNV 731
>sp|PG117_MONPV|UNCOATING factor OPG117|Monkeypox virus (MPXV)
Query: 1 GYIKYDLV 8
GYI YD V
Sbjct: 724 GYILYDNV 731
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GYIKYDL 7
GY YDL
Sbjct: 195 GYYAYDL 201
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 1 GYIKYDL 7
GY YDL
Sbjct: 195 GYYAYDL 201
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 GYIKYD 6
GY+ YD
Sbjct: 488 GYVPYD 493
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GYIKYDLV 8
G+I YD V
Sbjct: 2371 GFILYDTV 2378
358|Sequence|1786|1795|DLVQLMALFF
***** No hits found ******
359|Sequence|1791|1800|MALFFHRSQL
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 MALFFHR 7
+ LFFHR
Sbjct: 1235 LVLFFHR 1241
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 MALFFHR 7
+ LFFHR
Sbjct: 1233 LVLFFHR 1239
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 MALFFHR 7
+ LFFHR
Sbjct: 1232 LVLFFHR 1238
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3297 LVLYFHRRDL 3306
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3296 LLLYFHRRDL 3305
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3293 LLLYFHRRDL 3302
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3297 LLLYFHRRDL 3306
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3296 LLLYFHRRDL 3305
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3295 LLLYFHRRDL 3304
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3295 LLLYFHRRDL 3304
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3295 LLLYFHRRDL 3304
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 MALFFHRSQL 10
+ L+FHR L
Sbjct: 3295 LLLYFHRRDL 3304
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 4 FFHRSQL 10
FFHR +L
Sbjct: 142 FFHRGEL 148
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 LFFHRSQL 10
L+FHR L
Sbjct: 3287 LYFHRRDL 3294
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 LFFHRSQL 10
L+FHR L
Sbjct: 3287 LYFHRRDL 3294
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 LFFHRSQL 10
L+FHR L
Sbjct: 3283 LYFHRRDL 3290
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 LFFHRSQL 10
L+FHR L
Sbjct: 3274 LYFHRRDL 3281
>sp|SLFN_VACCC|SCHLAFEN-LIKE protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 FFHRSQL 10
FF+RS+L
Sbjct: 104 FFNRSEL 110
>sp|POXIN_MONPZ|POXIN-SCHLAFEN virus (strain Zaire-96-I-16) (MPXV)
Query: 4 FFHRSQL 10
FF+RS+L
Sbjct: 340 FFNRSEL 346
>sp|POXIN_MONPV|POXIN-SCHLAFEN virus (MPXV)
Query: 4 FFHRSQL 10
FF+RS+L
Sbjct: 340 FFNRSEL 346
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 ALFFHRSQ 9
AL+FH +Q
Sbjct: 84 ALYFHHTQ 91
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 ALFFHRSQ 9
AL+FH +Q
Sbjct: 84 ALYFHHTQ 91
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 MALFFHRSQL 10
+ ++FHR L
Sbjct: 3266 LLMYFHRRDL 3275
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 MALFFHRSQL 10
+ ++FHR L
Sbjct: 3288 LLMYFHRRDL 3297
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 MALFFHRSQL 10
+ ++FHR L
Sbjct: 3292 LLMYFHRRDL 3301
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 MALFFHRSQL 10
+ ++FHR L
Sbjct: 3288 LLMYFHRRDL 3297
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 MALFFHRSQL 10
+ ++FHR L
Sbjct: 3286 LLMYFHRRDL 3295
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3253 MYFHRRDL 3260
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3253 MYFHRRDL 3260
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3253 MYFHRRDL 3260
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3253 MYFHRRDL 3260
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3253 MYFHRRDL 3260
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3255 MYFHRRDL 3262
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3255 MYFHRRDL 3262
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3255 MYFHRRDL 3262
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3255 MYFHRRDL 3262
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3255 MYFHRRDL 3262
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3253 MYFHRRDL 3260
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3257 MYFHRRDL 3264
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3256 MYFHRRDL 3263
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3257 MYFHRRDL 3264
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3293 MYFHRRDL 3300
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 LFFHRSQL 10
++FHR L
Sbjct: 3257 MYFHRRDL 3264
360|Sequence|1796|1805|HRSQLLCYGL
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 HRSQLLCYGL 10
H SQ LC G+
Sbjct: 311 HTSQYLCTGV 320
>sp|NCAP_INBAC|NUCLEOPROTEIN B virus (strain B/Ann
Query: 1 HRSQLLCYGL 10
HRS L C G
Sbjct: 410 HRSALKCKGF 419
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 RSQLLCYGL 10
R + LCYGL
Sbjct: 21 RIRKLCYGL 29
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 RSQLLCYGL 10
R + LCYGL
Sbjct: 21 RIRKLCYGL 29
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RSQLLCYGL 10
R + LCYGL
Sbjct: 21 RIRKLCYGL 29
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 RSQLLCYGL 10
R + LCYGL
Sbjct: 21 RIRKLCYGL 29
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 RSQLLCYGL 10
R + LCYGL
Sbjct: 21 RIRKLCYGL 29
>sp|PAX_I03A2|PROTEIN PA-X|Influenza A virus (strain A/wyoming/03/2003
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCVGL 214
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 4 QLLCYGL 10
Q LCY L
Sbjct: 1308 QFLCYAL 1314
>sp|PAX_I93A0|PROTEIN PA-X|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I83A8|PROTEIN PA-X|Influenza A virus (strain A/Hong
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I80A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/4/1980
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I78A8|PROTEIN PA-X|Influenza A virus (strain A/Memphis/18/1978
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I78A7|PROTEIN PA-X|Influenza A virus (strain A/Memphis/2/1978
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I77A4|PROTEIN PA-X|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I76A6|PROTEIN PA-X|Influenza A virus (strain A/Memphis/110/1976
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I75A0|PROTEIN PA-X|Influenza A virus (strain A/Beijing/39/1975
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I73A5|PROTEIN PA-X|Influenza A virus (strain A/Port
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I72A4|PROTEIN PA-X|Influenza A virus (strain A/Memphis/101/1972
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I72A3|PROTEIN PA-X|Influenza A virus (strain A/Memphis/102/1972
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I72A2|PROTEIN PA-X|Influenza A virus (strain A/Udorn/307/1972
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I02A0|PROTEIN PA-X|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|PAX_I01A0|PROTEIN PA-X|Influenza A virus (strain A/Silky
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQELCAGL 214
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 4 QLLCYGL 10
Q LCY L
Sbjct: 1307 QFLCYAL 1313
>sp|PAX_I96A0|PROTEIN PA-X|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 RSQLLCYGL 10
+SQ LC GL
Sbjct: 206 KSQGLCAGL 214
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 RSQLLCY 8
RS+ +CY
Sbjct: 505 RSETMCY 511
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RSQLLCY 8
RS+ +CY
Sbjct: 505 RSETMCY 511
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 RSQLLCY 8
RS+ +CY
Sbjct: 505 RSETMCY 511
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 4 QLLCYGL 10
++LC+GL
Sbjct: 301 EILCHGL 307
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 5 LLCYGL 10
L+CYG
Sbjct: 65 LICYGF 70
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 1 HRSQLLCYGL 10
H++ + C GL
Sbjct: 80 HKANITCPGL 89
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 RSQLLCYGL 10
R LC+GL
Sbjct: 707 RHTRLCFGL 715
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 RSQLLCYGL 10
R LC+GL
Sbjct: 707 RHTRLCFGL 715
>sp|CEP1_HCMVM|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain Merlin)
Query: 1 HRSQLLC 7
+RS+LLC
Sbjct: 53 YRSELLC 59
>sp|CEP1_HCMVA|CYTOPLASMIC envelopment protein 1|Human cytomegalovirus (strain AD169)
Query: 1 HRSQLLC 7
+RS+LLC
Sbjct: 53 YRSELLC 59
>sp|GP_BUNYW|ENVELOPMENT polyprotein|Bunyamwera virus (BUNV)
Query: 1 HRSQLLCYGL 10
HR LC G
Sbjct: 286 HRESGLCQGF 295
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 1 HRSQLLCYGL 10
H S+ +C G+
Sbjct: 310 HTSRYICTGV 319
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 1 HRSQLLCYGL 10
H S+ +C G+
Sbjct: 310 HTSRYICTGV 319
361|Sequence|1801|1810|LCYGLWDHEE
>sp|NEF_HV2SB|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 2 CYGLWDHEE 10
C GLWD E
Sbjct: 28 CGGLWDESE 36
>sp|UL13_HCMVM|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCYGLW 6
LC GLW
Sbjct: 456 LCLGLW 461
>sp|UL13_HCMVA|UNCHARACTERIZED protein UL13|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LCYGLW 6
LC GLW
Sbjct: 456 LCLGLW 461
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LCYG--LWDHE 9
+CY LWD+E
Sbjct: 6511 ICYKFVLWDYE 6521
>sp|DPOL_ORFN2|DNA polymerase|Orf virus (strain NZ2) (OV
Query: 1 LCYGLWDH 8
LC LW H
Sbjct: 467 LCLYLWSH 474
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 LCYGLWDH 8
+ YG+W H
Sbjct: 102 VAYGVWPH 109
>sp|VU2_HHV6Z|PROTEIN U2|Human herpesvirus 6B (strain Z29)
Query: 3 YGLWDH 8
+GLW H
Sbjct: 155 FGLWKH 160
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 YGLWDH 8
YG+W H
Sbjct: 104 YGVWPH 109
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 YGLWDH 8
YG+W H
Sbjct: 104 YGVWPH 109
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 YGLWDH 8
YG+W H
Sbjct: 104 YGVWPH 109
>sp|PHOSP_MEASC|PHOSPHOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYHVYDH 115
>sp|VU1_HHV6U|PROTEIN U1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YGLWDH 8
+GLW H
Sbjct: 155 FGLWKH 160
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 CYGLW 6
CY LW
Sbjct: 6097 CYNLW 6101
Query: 5 LWDHE 9
LWD+E
Sbjct: 6195 LWDYE 6199
Query: 3 YGLWDH 8
YG WD+
Sbjct: 4658 YGGWDN 4663
>sp|KITH_VARV|THYMIDINE kinase|Variola virus
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|KITH_VAR67|THYMIDINE kinase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|KITH_VACCT|THYMIDINE kinase|Vaccinia virus (strain Tian Tan)
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|KITH_VACCC|THYMIDINE kinase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|KITH_VACCA|THYMIDINE kinase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|KITH_MONPZ|THYMIDINE kinase|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|KITH_MONPV|THYMIDINE kinase|Monkeypox virus (MPXV)
Query: 4 GLWDHEE 10
GLW H++
Sbjct: 49 GLWTHDK 55
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 1 LCYGLW 6
LC G+W
Sbjct: 790 LCLGIW 795
>sp|V_MEASC|NON-STRUCTURAL protein V|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYHVYDH 115
>sp|PHOSP_MEASM|PHOSPHOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|PHOSP_MEASI|PHOSPHOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|PHOSP_MEASE|PHOSPHOPROTEIN virus (strain Edmonston) (MeV)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|PHOSP_MEASA|PHOSPHOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 5 LWDHE 9
LW+HE
Sbjct: 527 LWEHE 531
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 5 LWDHE 9
LW+HE
Sbjct: 531 LWEHE 535
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CYGLWDH 8
CY +W+
Sbjct: 663 CYNVWEQ 669
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 4 GLWDHEE 10
GLW H E
Sbjct: 667 GLWYHPE 673
>sp|V_MEASW|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-Schwarz vaccine)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|V_MEASA|NON-STRUCTURAL protein V|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CYGLWDH 8
CY +W+
Sbjct: 663 CYNVWEQ 669
Query: 5 LWDHE 9
LWD+E
Sbjct: 6170 LWDYE 6174
>sp|V_MEASE|NON-STRUCTURAL protein V|Measles virus (strain Edmonston) (MeV)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 5 LWDHEE 10
WDH++
Sbjct: 145 FWDHQD 150
>sp|V_MEASI|NON-STRUCTURAL protein V|Measles virus (strain IP-3-Ca) (MeV)
Query: 2 CYGLWDH 8
CY ++DH
Sbjct: 109 CYYVYDH 115
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 GLWDHEE 10
GLW H E
Sbjct: 667 GLWLHPE 673
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 4 GLWDHEE 10
GLW H E
Sbjct: 667 GLWLHPE 673
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LCYGLW 6
+C GLW
Sbjct: 532 VCAGLW 537
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 YGLWDH 8
YG W H
Sbjct: 6123 YGCWRH 6128
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 CYGLWDH 8
CY W H
Sbjct: 368 CYRHWGH 374
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 368 CYRHWGH 374
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 CYGLWDH 8
CY W H
Sbjct: 367 CYRHWGH 373
>sp|OX2V_HHV8P|OX-2 membrane glycoprotein homolog|Human herpesvirus 8 type P
Query: 2 CYGLWD 7
C GLW+
Sbjct: 86 CPGLWN 91
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 YGLWDH 8
YG W H
Sbjct: 6161 YGCWRH 6166
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 YGLWDH 8
YG W H
Sbjct: 6181 YGCWRH 6186
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 YGLWDH 8
YG W H
Sbjct: 6211 YGCWRH 6216
>sp|UL78_HCMVM|PROTEIN UL78|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LCYG--LWDHE 9
+ YG LW HE
Sbjct: 138 ISYGRDLWHHE 148
>sp|UL78_HCMVA|UNCHARACTERIZED protein UL78|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LCYG--LWDHE 9
+ YG LW HE
Sbjct: 138 ISYGRDLWHHE 148
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 YGLWDH 8
+ +WDH
Sbjct: 73 HSIWDH 78
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 YGLWDH 8
+ +WDH
Sbjct: 73 HSIWDH 78
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 YGLWDH 8
+ +WDH
Sbjct: 73 HSIWDH 78
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 YGLWDH 8
+ +WDH
Sbjct: 73 HSIWDH 78
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 YGLWDH 8
+ +WDH
Sbjct: 73 HSIWDH 78
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CYGLW 6
C GLW
Sbjct: 10 CCGLW 14
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CYGLW 6
C GLW
Sbjct: 10 CCGLW 14
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CYGLW 6
C GLW
Sbjct: 10 CCGLW 14
>sp|VE2_HPV51|REGULATORY protein E2|Human papillomavirus 51
Query: 2 CYGLW 6
CY LW
Sbjct: 98 CYELW 102
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 5 LWDHEE 10
+W HE+
Sbjct: 18 IWKHEQ 23
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 LWDHE 9
LW HE
Sbjct: 2236 LWKHE 2240
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 1 LCYGLWDH 8
LC LW++
Sbjct: 464 LCQYLWEY 471
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LCYGLWDH 8
LC LW++
Sbjct: 464 LCQYLWEY 471
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCYGLWDH 8
LC LW++
Sbjct: 465 LCQYLWEY 472
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LCYGLWDH 8
LC LW++
Sbjct: 465 LCQYLWEY 472
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 1 LCYGLWDH 8
LC LW++
Sbjct: 465 LCQYLWEY 472
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|GLYCO_CHAV|GLYCOPROTEIN virus (strain I653514) (CHPV)
Query: 1 LCYGLWDHEE 10
LC WD E
Sbjct: 307 LCQNTWDKVE 316
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 1 LCYGLW 6
+ YG+W
Sbjct: 186 IAYGIW 191
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 CYGLWDHE 9
C+ WD E
Sbjct: 619 CFAPWDLE 626
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 6 WDHEE 10
WDH E
Sbjct: 472 WDHYE 476
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 6 WDHEE 10
WDH E
Sbjct: 472 WDHYE 476
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 4 GLWDH 8
G WDH
Sbjct: 3202 GEWDH 3206
362|Sequence|1806|1815|WDHEEDSPSK
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 WDHEEDSPS 9
WD++ D+P+
Sbjct: 6538 WDYKRDAPA 6546
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WDHEEDSPSK 10
W ++ED+P K
Sbjct: 2784 WHYDEDNPYK 2793
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WDHEEDSPSK 10
W ++ED+P K
Sbjct: 2783 WHYDEDNPYK 2792
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WDHEEDSPSK 10
W ++ED+P K
Sbjct: 2784 WHYDEDNPYK 2793
>sp|TRM3_HHV7J|TRIPARTITE terminase subunit 3|Human herpesvirus 7 (strain JI)
Query: 1 WDHEED 6
W HE+D
Sbjct: 19 WKHEQD 24
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 WDHEEDSPSK 10
W H++D P +
Sbjct: 2823 WHHDKDHPYR 2832
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WDHEED 6
WD EED
Sbjct: 1563 WDKEED 1568
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WDHEED 6
WD EED
Sbjct: 1563 WDKEED 1568
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WDHEED 6
WD EED
Sbjct: 1563 WDKEED 1568
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WDHEED 6
WD EED
Sbjct: 1563 WDKEED 1568
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WDHEED 6
WD EED
Sbjct: 1563 WDKEED 1568
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 WDHEEDSPSK 10
W +++D+P K
Sbjct: 2814 WHYDQDNPYK 2823
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 1 WDHEEDSPSK 10
+DH + PS+
Sbjct: 1227 YDHGQSDPSR 1236
>sp|GM_HHV8P|ENVELOPE glycoprotein M|Human herpesvirus 8 type P
Query: 2 DHEEDS 7
DHE DS
Sbjct: 385 DHESDS 390
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 WDHEEDSPSK 10
W H+ D+P +
Sbjct: 2800 WFHDNDNPYR 2809
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 EEDSPS 9
EEDSP+
Sbjct: 696 EEDSPT 701
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 315 HEQDRPT 321
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2783 WHYDQDHPYK 2792
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2783 WHYDQDHPYK 2792
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2783 WHYDQDHPYK 2792
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2783 WHYDQDHPYK 2792
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2780 WHYDQDHPYK 2789
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2783 WHYDQDHPYK 2792
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WDHEEDSPSK 10
W +++D P K
Sbjct: 2783 WHYDQDHPYK 2792
>sp|CAPSD_HEVCT|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 4
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 445 HEQDRPT 451
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 3 HEEDSP 8
H+EDSP
Sbjct: 1847 HDEDSP 1852
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 DHEEDSPSK 10
D ED+PS+
Sbjct: 2380 DEGEDTPSE 2388
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 446 HEQDRPT 452
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 3 HEEDSPS 9
HE+D P+
Sbjct: 447 HEQDRPT 453
>sp|SHUT_HHV2H|VIRION host shutoff protein|Human herpesvirus 2 (strain HG52)
Query: 2 DHEEDSP 8
D+EED P
Sbjct: 336 DYEEDPP 342
>sp|SHUT_HHV2G|VIRION host shutoff protein|Human herpesvirus 2 (strain G)
Query: 2 DHEEDSP 8
D+EED P
Sbjct: 336 DYEEDPP 342
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 WDHEEDS 7
WD+ +DS
Sbjct: 6545 WDYVKDS 6551
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 WDHEEDS 7
WD+ +DS
Sbjct: 6565 WDYVKDS 6571
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 WDHEEDS 7
WD+ +DS
Sbjct: 6595 WDYVKDS 6601
>sp|SHUT_HHV23|VIRION host shutoff protein|Human herpesvirus 2 (strain 333)
Query: 2 DHEEDSP 8
D+EED P
Sbjct: 336 DYEEDPP 342
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 WDHEED 6
W+ EED
Sbjct: 1006 WEREED 1011
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 WDHEEDSP 8
WD D+P
Sbjct: 2038 WDEYRDNP 2045
>sp|SF33K_ADE41|PROTEIN 33K|Human adenovirus F serotype 41
Query: 1 WDHEEDS 7
WD EE+S
Sbjct: 25 WDEEEES 31
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 3 HEEDSP 8
HEED+P
Sbjct: 566 HEEDTP 571
>sp|GAG_HV2D2|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WDHEEDSP 8
WD + SP
Sbjct: 209 WDQQHPSP 216
>sp|GAG_HV2EH|GAG polyprotein|Human immunodeficiency virus type 2
Query: 1 WDHEEDSP 8
WD + SP
Sbjct: 209 WDQQHPSP 216
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 1 WDHEED 6
WD EE+
Sbjct: 359 WDGEEE 364
363|Sequence|1811|1820|DSPSKEHDKS
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DSPSKEHDKS 10
D PS+ HD S
Sbjct: 460 DGPSRGHDTS 469
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DSPSKEHDKS 10
D PS+ HD S
Sbjct: 460 DEPSRGHDTS 469
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 DSPSKEHDKS 10
D PS HD S
Sbjct: 458 DEPSIRHDTS 467
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DSPSKEHDK 9
DSP + H K
Sbjct: 6374 DSPCESHGK 6382
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 DSPSKEHDK 9
DSP + H K
Sbjct: 6351 DSPCESHGK 6359
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 1 DSPSKEH 7
D+P+KEH
Sbjct: 57 DTPAKEH 63
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 4 SKEHD 8
SKEHD
Sbjct: 253 SKEHD 257
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 3 PSKEHDK 9
PSK HDK
Sbjct: 299 PSKLHDK 305
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 3 PSKEHDK 9
PSK HDK
Sbjct: 302 PSKLHDK 308
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 PSKEHDK 9
PSK HDK
Sbjct: 300 PSKLHDK 306
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 3 PSKEHDK 9
PSK HDK
Sbjct: 300 PSKLHDK 306
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 3 PSKEHDK 9
PSK HDK
Sbjct: 300 PSKLHDK 306
364|Sequence|1816|1825|EHDKSGEEEQ
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 1 EHDKSGEE 8
+HD SGEE
Sbjct: 281 DHDLSGEE 288
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 1 EHDKSGEE 8
+HD +GEE
Sbjct: 281 DHDLAGEE 288
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 1 EHDKSGEE 8
+HD +GEE
Sbjct: 281 DHDLAGEE 288
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 1 EHDKSGEE 8
+HD +GEE
Sbjct: 281 DHDLAGEE 288
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 EHDKSGE 7
EHD SG+
Sbjct: 5833 EHDASGD 5839
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 HDKSGEEEQ 10
HD S EE++
Sbjct: 1035 HDDSKEEDE 1043
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 HDKSGEEEQ 10
HD S EE++
Sbjct: 1035 HDDSKEEDE 1043
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 HDKSGEEEQ 10
HD S EE++
Sbjct: 1035 HDDSKEEDE 1043
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 HDKSGEEE 9
HDKS EE+
Sbjct: 1094 HDKSFEED 1101
>sp|GLYC_LYCVW|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 EHDKSGE 7
EH K+GE
Sbjct: 379 EHAKTGE 385
>sp|GLYC_LYCVA|PRE-GLYCOPROTEIN polyprotein GP complex|Lymphocytic choriomeningitis virus (strain
Query: 1 EHDKSGE 7
EH K+GE
Sbjct: 379 EHAKTGE 385
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 1 EHDKSGEE 8
+HD GEE
Sbjct: 279 DHDLPGEE 286
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 1 EHDKSGEE 8
+HD GEE
Sbjct: 279 DHDLPGEE 286
>sp|GP_HANTB|ENVELOPMENT polyprotein|Hantaan virus (strain B-1) (Korean
Query: 1 EHDKSGEE 8
+HD GEE
Sbjct: 279 DHDLPGEE 286
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 1 EHDKSGEEEQ 10
E+ K G E+Q
Sbjct: 337 EYTKGGNEDQ 346
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EHDKSGEEEQ 10
E+ K G E+Q
Sbjct: 621 EYTKGGNEDQ 630
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 2 HDKSG 6
HDKSG
Sbjct: 404 HDKSG 408
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 2 HDKSG 6
HDKSG
Sbjct: 404 HDKSG 408
>sp|ITP_HCMVM|INNER tegument protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EHDKSGEEEQ 10
+HD G+E++
Sbjct: 103 QHDGGGDEDR 112
>sp|ITP_HCMVA|INNER tegument protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EHDKSGEEEQ 10
+HD G+E++
Sbjct: 103 QHDGGGDEDR 112
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 4 KSGEEEQ 10
KSGEE++
Sbjct: 673 KSGEEKK 679
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 2 HDKSGE 7
H KSGE
Sbjct: 360 HTKSGE 365
365|Sequence|1821|1830|GEEEQGAEEG
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 EEQGAEE 9
E QGAEE
Sbjct: 2767 ESQGAEE 2773
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EEEQGAEEG 10
E+E G+E+G
Sbjct: 493 EDEDGSEDG 501
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EEEQGAEEG 10
E+E G+E+G
Sbjct: 493 EDEDGSEDG 501
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EEEQGAEEG 10
E+E G+E+G
Sbjct: 493 EDEDGSEDG 501
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 EEEQGAEE 9
E+EQ AE+
Sbjct: 760 EQEQSAED 767
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 EEEQGAEE 9
E+EQ AE+
Sbjct: 760 EQEQSAED 767
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 EEEQGAEE 9
E+EQ AE+
Sbjct: 760 EQEQSAED 767
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 EEEQGAEE 9
E+EQ AE+
Sbjct: 760 EQEQSAED 767
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPEGVEEG 631
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPEGVEEG 631
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I01A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 145 GESPKGVEEG 154
>sp|PA_I01A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 145 GESPKGVEEG 154
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 615 GESPKGVEEG 624
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 599 GESPKGVEEG 608
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPRGVEEG 631
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 618 GESPKGVEEG 627
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 615 GESPKGVEEG 624
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGVEEG 631
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGMEEG 631
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 1 GEEEQGAEEG 10
GE +G EEG
Sbjct: 622 GESPKGMEEG 631
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 1 GEEEQGAEEG 10
GE G EEG
Sbjct: 622 GESPNGVEEG 631
366|Sequence|1826|1835|GAEEGPGVPA
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EEGPGVP 9
EE P VP
Sbjct: 6 EENPAVP 12
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 EEGPGVP 9
EE P VP
Sbjct: 6 EENPAVP 12
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 GAEEGPGVPA 10
G ++GP VPA
Sbjct: 499 GEDDGPTVPA 508
>sp|PRIM_EBVB9|DNA primase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 AEEGPGVP 9
A+EGP P
Sbjct: 377 ADEGPTYP 384
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 EEGPGVPA 10
++ PG+PA
Sbjct: 2407 DDAPGMPA 2414
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 5 GPGVP 9
GPGVP
Sbjct: 2068 GPGVP 2072
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I78A9|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I77AD|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Tennessee/26/1977
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I73A4|POLYMERASE acidic protein|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I67A2|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I61A1|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I05A1|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I30A0|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I01A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I01A0|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I09A0|POLYMERASE acidic protein|Influenza A virus (strain swl
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I82A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I80A2|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I59A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I04A1|POLYMERASE acidic protein|Influenza A virus (strain A/Vietnam/1203/2004
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I03A1|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 289 SHEGEGIP 296
>sp|PA_I03A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 292 SHEGEGIP 299
>sp|PA_I02A5|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I02A4|POLYMERASE acidic protein|Influenza A virus (strain A/Silky
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I02A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I00A0|POLYMERASE acidic protein|Influenza A virus (strain A/Duck/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 1 GAEEGPGVP 9
GAE+GP P
Sbjct: 369 GAEQGPRPP 377
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 1 GAEEGPGVP 9
GAE+GP P
Sbjct: 369 GAEQGPRPP 377
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 1 GAEEGPGVP 9
GAE+GP P
Sbjct: 369 GAEQGPRPP 377
>sp|PA_I96A0|POLYMERASE acidic protein|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I85A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I02A7|POLYMERASE acidic protein|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 289 SHEGEGIP 296
>sp|PA_I02A6|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I02A3|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 273 SHEGEGIP 280
>sp|PA_I02A2|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|PA_I02A1|POLYMERASE acidic protein|Influenza A virus (strain A/Guinea
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 EEGPGVPA 10
+ GP VP+
Sbjct: 110 DSGPAVPS 117
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 EEGPGVPA 10
+ GP VP+
Sbjct: 110 DSGPAVPS 117
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2414 EEAPEMPA 2421
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2414 EEAPEMPA 2421
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2414 EEAPEMPA 2421
>sp|PA_I78A3|POLYMERASE acidic protein|Influenza A virus (strain A/Mallard/New
Query: 2 AEEGPGVP 9
+ EG G+P
Sbjct: 296 SHEGEGIP 303
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2414 EEAPEMPA 2421
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2415 EEAPEMPA 2422
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2414 EEAPEMPA 2421
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2415 EEAPEMPA 2422
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 EEGPGVPA 10
EE P +PA
Sbjct: 2415 EEAPEMPA 2422
367|Sequence|1831|1840|PGVPAATTED
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 1 PGVPAATTED 10
PG P TT D
Sbjct: 715 PGAPIPTTRD 724
>sp|MATRX_LBV|MATRIX protein|Lagos bat virus (LBV)
Query: 1 PGVPAATTED 10
PG P+A +D
Sbjct: 19 PGTPSAPPDD 28
>sp|NS1_I96A0|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 PGVPAATTED 10
P VP TED
Sbjct: 164 PSVPGHFTED 173
>sp|VE2_HPV25|REGULATORY protein E2|Human papillomavirus 25
Query: 1 PGVPAATTED 10
PG P TT D
Sbjct: 318 PGSPTTTTSD 327
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus
Query: 1 PGVPAATT 8
PGV ++TT
Sbjct: 19 PGVKSSTT 26
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus
Query: 1 PGVPAATT 8
PGV ++TT
Sbjct: 19 PGVKSSTT 26
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PGVPAATTED 10
PG TTE+
Sbjct: 1067 PGTTVVTTEE 1076
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 PGVPAAT 7
PGV AAT
Sbjct: 37 PGVAAAT 43
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 PGVPAAT 7
PGV AAT
Sbjct: 38 PGVAAAT 44
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 PGVPAAT 7
PGV AAT
Sbjct: 38 PGVAAAT 44
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 PGVPAAT 7
PGV AAT
Sbjct: 38 PGVAAAT 44
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 1 PGVPAATTED 10
P +PA TT++
Sbjct: 137 PQIPAPTTDE 146
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 GVPAATTED 10
G+PA TE+
Sbjct: 1392 GLPARLTEE 1400
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 2 GVPAATTED 10
G+PA TE+
Sbjct: 1413 GLPARLTEE 1421
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 2 GVPAATTED 10
G+PA TE+
Sbjct: 1393 GLPARLTEE 1401
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 2 GVPAATTED 10
G+PA TE+
Sbjct: 1394 GLPARLTEE 1402
368|Sequence|1836|1845|ATTEDHIQVE
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 TTEDHIQV 9
TTED +QV
Sbjct: 3308 TTEDMLQV 3315
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 2 TTEDHIQV 9
TTED +QV
Sbjct: 3328 TTEDMLQV 3335
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 TTEDHIQV 9
TTED +QV
Sbjct: 3337 TTEDMLQV 3344
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 TTEDHIQV 9
TTED +QV
Sbjct: 3337 TTEDMLQV 3344
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 TTEDHIQV 9
TTED +QV
Sbjct: 3337 TTEDMLQV 3344
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 TTEDHIQV 9
TTED +QV
Sbjct: 3337 TTEDMLQV 3344
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 TEDHIQVE 10
T+D IQVE
Sbjct: 516 TQDDIQVE 523
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 TTEDHI 7
TT+DH+
Sbjct: 1637 TTDDHV 1642
>sp|TRX2_HHV7M|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain MUK)
Query: 1 ATTEDHIQV 9
+TT D+IQ+
Sbjct: 49 STTTDYIQI 57
>sp|TRX2_HHV7J|TRIPLEX capsid protein 2|Human herpesvirus 7 (strain JI)
Query: 1 ATTEDHIQV 9
+TT D+IQ+
Sbjct: 49 STTTDYIQI 57
>sp|GAG_HV2ST|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 TEDHIQVE 10
TED +Q+E
Sbjct: 490 TEDFLQLE 497
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 DHIQVE 10
+HIQ+E
Sbjct: 1660 EHIQIE 1665
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 TEDHIQVE 10
T+D +QVE
Sbjct: 516 TQDDVQVE 523
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 DHIQVE 10
+HIQ+E
Sbjct: 1660 EHIQIE 1665
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 TEDHIQVE 10
T+D +QVE
Sbjct: 516 TQDDVQVE 523
>sp|UL117_HCMVA|PROTEIN UL117|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 TEDHIQV 9
++DH+Q+
Sbjct: 5 SQDHVQI 11
>sp|UL117_HCMVM|PROTEIN UL117|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 TEDHIQV 9
++DH+Q+
Sbjct: 5 SQDHVQI 11
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 2 TTEDH 6
TTEDH
Sbjct: 335 TTEDH 339
369|Sequence|1841|1850|HIQVEARVGP
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 HIQVEARVGP 10
HI+ EAR+ P
Sbjct: 1643 HIKAEARLSP 1652
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 HIQVEARVGP 10
HI+ EAR+ P
Sbjct: 1643 HIKAEARLSP 1652
370|Sequence|1846|1855|ARVGPTDGTP
>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)
Query: 1 ARVGPTDGTP 10
A VGP DG P
Sbjct: 60 AHVGPLDGEP 69
>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)
Query: 1 ARVGPTDGTP 10
A VGP DG P
Sbjct: 60 AHVGPLDGEP 69
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 ARVGPTDG 8
ARVG TD
Sbjct: 448 ARVGTTDA 455
>sp|VP2_POVKI|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 350)
Query: 4 GPTDGTP 10
GPT GTP
Sbjct: 315 GPTGGTP 321
>sp|VP2_POVK6|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 60)
Query: 4 GPTDGTP 10
GPT GTP
Sbjct: 315 GPTGGTP 321
>sp|VP2_POVK3|MINOR capsid protein VP2|KI polyomavirus (isolate Stockholm 380)
Query: 4 GPTDGTP 10
GPT GTP
Sbjct: 315 GPTGGTP 321
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 4 GPTDGTP 10
GPT+G P
Sbjct: 761 GPTEGAP 767
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 4 GPTDGTP 10
GPT+G P
Sbjct: 761 GPTEGAP 767
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 4 GPTDGTP 10
GPT+G P
Sbjct: 761 GPTEGAP 767
>sp|VPR_HV2BE|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 PTDGTP 10
P DGTP
Sbjct: 10 PEDGTP 15
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 4 GPTDGTP 10
GP DG P
Sbjct: 216 GPADGAP 222
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 RVGPTDGTP 10
+VGP TP
Sbjct: 1832 QVGPQKSTP 1840
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 RVGPTDGTP 10
+VGP TP
Sbjct: 1831 QVGPQKSTP 1839
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 RVGPTDGTP 10
+VGP TP
Sbjct: 1831 QVGPQKSTP 1839
>sp|VPR_HV2SB|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 ARVGPTDGTP 10
A P DGTP
Sbjct: 6 AEFPPEDGTP 15
>sp|VPR_HV2RO|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 PTDGTP 10
P DGTP
Sbjct: 10 PVDGTP 15
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 1 ARVGPTD 7
+R GPTD
Sbjct: 341 SRAGPTD 347
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 3 VGPTDGT 9
+GPT+GT
Sbjct: 166 LGPTNGT 172
>sp|GL_HHV11|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain 17)
Query: 3 VGPTDGT 9
+GPT+GT
Sbjct: 166 LGPTNGT 172
>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 PTDGTP 10
P DGTP
Sbjct: 10 PEDGTP 15
>sp|VPR_HV2G1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 5 PTDGTP 10
P DGTP
Sbjct: 10 PEDGTP 15
371|Sequence|1851|1860|TDGTPEPQVE
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 2 DGTPEP 7
DGTP P
Sbjct: 2949 DGTPHP 2954
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 2 DGTPEP 7
DGTP P
Sbjct: 2969 DGTPHP 2974
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 2 DGTPEP 7
DGTP P
Sbjct: 2999 DGTPHP 3004
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 DGTPEP 7
DGTP P
Sbjct: 2949 DGTPHP 2954
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 2 DGTPEP 7
DGTP P
Sbjct: 2969 DGTPHP 2974
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 DGTPEP 7
DGTP P
Sbjct: 2999 DGTPHP 3004
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DGTPEP 7
DG+P+P
Sbjct: 2911 DGSPQP 2916
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 DGTPEP 7
DG+P+P
Sbjct: 2911 DGSPQP 2916
>sp|VPK_HHV8P|VIRAL protein kinase|Human herpesvirus 8 type P
Query: 2 DGTPEP 7
DG PEP
Sbjct: 337 DGRPEP 342
>sp|VE6_HPV12|PROTEIN E6|Human papillomavirus 12
Query: 1 TDGTPE 6
TD TPE
Sbjct: 11 TDSTPE 16
>sp|DUT_HHV8P|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 8 type P
Query: 1 TDGTPEPQV 9
T G PEP V
Sbjct: 164 TPGPPEPHV 172
>sp|CAPSD_HEVME|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 2
Query: 2 DGTPEPQVE 10
DG P P VE
Sbjct: 521 DGRPLPTVE 529
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 GTPEPQV 9
G PEP V
Sbjct: 412 GLPEPTV 418
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 GTPEPQV 9
G PEP V
Sbjct: 412 GLPEPTV 418
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 TDGTPEPQVE 10
D +PE Q+E
Sbjct: 91 ADRSPEAQIE 100
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 TDGTPEPQVE 10
D +PE Q+E
Sbjct: 91 ADRSPEAQIE 100
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 DGTPEPQVE 10
+ +P P+VE
Sbjct: 2676 ESSPSPEVE 2684
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 DGTPEPQVE 10
+ +P P+VE
Sbjct: 2676 ESSPSPEVE 2684
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 DGTPEPQVE 10
+ +P P+VE
Sbjct: 2676 ESSPSPEVE 2684
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 DGTPEPQVE 10
+ +P P+VE
Sbjct: 2676 ESSPSPEVE 2684
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 5 PEPQV 9
PEPQV
Sbjct: 181 PEPQV 185
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 5 PEPQV 9
PEPQV
Sbjct: 82 PEPQV 86
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 2 DGTPEPQVE 10
D +PE Q+E
Sbjct: 92 DRSPEAQIE 100
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 DGTPEPQV 9
DG P P +
Sbjct: 905 DGVPNPVI 912
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 DGTPEPQV 9
DG P P +
Sbjct: 905 DGVPNPVI 912
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 5 PEPQV 9
PEPQV
Sbjct: 189 PEPQV 193
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 5 PEPQV 9
PEPQV
Sbjct: 178 PEPQV 182
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 5 PEPQV 9
PEPQV
Sbjct: 591 PEPQV 595
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 GTPEPQ 8
GTP PQ
Sbjct: 204 GTPTPQ 209
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 5 PEPQV 9
PEPQV
Sbjct: 185 PEPQV 189
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 5 PEPQVE 10
PEP+VE
Sbjct: 771 PEPEVE 776
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 5 PEPQV 9
PEPQV
Sbjct: 179 PEPQV 183
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 5 PEPQVE 10
PEP+VE
Sbjct: 771 PEPEVE 776
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 5 PEPQV 9
PEPQV
Sbjct: 188 PEPQV 192
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 DGTPEPQVE 10
DG P P E
Sbjct: 272 DGQPHPSPE 280
>sp|CAPSH_ADE06|HEXON protein|Human adenovirus C serotype 6
Query: 5 PEPQV 9
PEPQV
Sbjct: 92 PEPQV 96
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 DGTPEPQVE 10
DG P P E
Sbjct: 272 DGQPHPSPE 280
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 3 GTPEPQ 8
GTP PQ
Sbjct: 491 GTPPPQ 496
>sp|CAPSH_ADE04|HEXON protein|Human adenovirus E serotype 4
Query: 5 PEPQV 9
PEPQV
Sbjct: 84 PEPQV 88
372|Sequence|1856|1865|EPQVELRPRD
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PQVELRPRD 10
P+ ELRP D
Sbjct: 1902 PKDELRPLD 1910
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PQVELRPRD 10
P+ ELRP D
Sbjct: 1904 PKDELRPLD 1912
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PQVELRPRD 10
P+ ELRP D
Sbjct: 1905 PKDELRPLD 1913
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 PQVELRPRD 10
P+ ELRP D
Sbjct: 1905 PKDELRPLD 1913
>sp|NS1A_HASV1|NON-STRUCTURAL polyprotein 1A|Human astrovirus-1 (HAstV-1)
Query: 1 EPQVELRPRD 10
EP+VE +P D
Sbjct: 772 EPEVESQPLD 781
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 5 ELRPRD 10
E+RPRD
Sbjct: 97 EIRPRD 102
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 5 ELRPRD 10
E+RPRD
Sbjct: 97 EIRPRD 102
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 5 ELRPRD 10
E+RPRD
Sbjct: 99 EIRPRD 104
>sp|NS1A_HASV8|NON-STRUCTURAL polyprotein 1A|Human astrovirus-8 (HAstV-8)
Query: 1 EPQVELRPRD 10
EP++E +P D
Sbjct: 773 EPKIEAQPLD 782
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 77 PQVPLRP 83
>sp|NS1A_HASV4|NON-STRUCTURAL polyprotein 1A|Human astrovirus-4 (HAstV-4)
Query: 1 EPQVELRPRD 10
EP+ E +P D
Sbjct: 772 EPEAETQPLD 781
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 EPQVELRPRD 10
EP++E +P D
Sbjct: 773 EPKIEAQPLD 782
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 EPQVELRPRD 10
EP+VE +P D
Sbjct: 772 EPEVESQPLD 781
>sp|NS1A_HASV5|NON-STRUCTURAL polyprotein 1A|Human astrovirus-5 (HAstV-5)
Query: 1 EPQVELRPRD 10
EP+ E +P D
Sbjct: 772 EPEAETQPLD 781
>sp|NEF_HV1S3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 EPQVELRP 8
+PQV LRP
Sbjct: 70 KPQVPLRP 77
>sp|NEF_HV1MN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 EPQVELRP 8
+PQV LRP
Sbjct: 73 KPQVPLRP 80
>sp|NEF_HV1AN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 78 PQVPLRP 84
>sp|NEF_HV1Z2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1S1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 74 PQVPLRP 80
>sp|NEF_HV1RH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 74 PQVPLRP 80
>sp|NEF_HV1BN|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 EPQVELRP 8
+PQV LRP
Sbjct: 83 KPQVPLRP 90
>sp|NEF_HV1ET|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1ZH|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1S9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 70 PQVPLRP 76
>sp|NEF_HV197|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1LW|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1SE|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1MA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 75 PQVPLRP 81
>sp|NEF_HV1JR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 82 PQVPLRP 88
>sp|NEF_HV196|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 81 PQVPLRP 87
>sp|NEF_HV1U4|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1OY|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 77 PQVPLRP 83
>sp|NEF_HV1B8|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1A2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 76 PQVPLRP 82
>sp|NEF_HV19N|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV190|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1V9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1M2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 67 PQVPLRP 73
>sp|NEF_HV1YF|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 78 PQVPLRP 84
>sp|NEF_HV1SC|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1BR|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1B1|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1YB|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1Y2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 82 PQVPLRP 88
>sp|NEF_HV1MP|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 67 PQVPLRP 73
>sp|NEF_HV192|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1LA|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1EL|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV1B9|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV112|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1H3|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1H2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 72 PQVPLRP 78
>sp|NEF_HV1Z6|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 78 PQVPLRP 84
>sp|NEF_HV1ND|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 73 PQVPLRP 79
>sp|NEF_HV193|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 2 PQVELRP 8
PQV LRP
Sbjct: 75 PQVPLRP 81
>sp|EBNA4_EBVG|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PQVELRP 8
PQVEL P
Sbjct: 655 PQVELTP 661
>sp|CORE5_ADE40|CORE-CAPSID bridging protein|Human adenovirus F serotype 40
Query: 1 EPQVELRP 8
EP+V++RP
Sbjct: 200 EPEVKVRP 207
>sp|NEF_HV1S2|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 1 EPQVELRP 8
+PQ+ LRP
Sbjct: 68 KPQIPLRP 75
373|Sequence|1861|1870|LRPRDTRRIS
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 LRPRDTRRIS 10
L P D+ RIS
Sbjct: 385 LHPADSTRIS 394
374|Sequence|1866|1875|TRRISLRFRR
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 TRRISLRFRR 10
TRR +RF R
Sbjct: 289 TRRTGVRFSR 298
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 TRRISLRFRR 10
TRR +RF R
Sbjct: 289 TRRGGVRFSR 298
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 TRRISLRFRR 10
TRR +RF R
Sbjct: 289 TRRGGVRFSR 298
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 TRRISLRFRR 10
TRR +RF R
Sbjct: 289 TRRGGVRFSR 298
>sp|RP19_VACCC|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 TRRISL 6
TRRISL
Sbjct: 74 TRRISL 79
>sp|RP19_VACCA|DNA-DIRECTED RNA polymerase 19 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 1 TRRISL 6
TRRISL
Sbjct: 74 TRRISL 79
>sp|RP19_VAR67|DNA-DIRECTED RNA polymerase 19 kDa|Variola virus (isolate
Query: 1 TRRISL 6
TRRISL
Sbjct: 74 TRRISL 79
>sp|RP19_MONPV|DNA-DIRECTED RNA polymerase 19 kDa|Monkeypox virus (MPXV)
Query: 1 TRRISL 6
TRRISL
Sbjct: 71 TRRISL 76
375|Sequence|1871|1880|LRFRRRKKEG
>sp|VL2_HPV38|MINOR capsid protein L2|Human papillomavirus 38
Query: 1 LRFRRRKKE 9
LR+RRRK++
Sbjct: 517 LRWRRRKRK 525
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 331 RERRRKKRG 339
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 337 RERRRKKRG 345
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 328 RERRRKKRG 336
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 328 RERRRKKRG 336
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 328 RERRRKKRG 336
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 328 RERRRKKRG 336
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 RFRRRKKEG 10
R RRRKK G
Sbjct: 339 RERRRKKRG 347
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 544 FRRRKRMG 551
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 3 FRRRKKEG 10
FRRRK+ G
Sbjct: 552 FRRRKRMG 559
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 LRFRRRKKE 9
LR+R+RK++
Sbjct: 508 LRWRKRKRK 516
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 3 FRRRKKEG 10
FR R++EG
Sbjct: 512 FREREEEG 519
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 FRRRKK 8
FRR+KK
Sbjct: 6792 FRRKKK 6797
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 2 RFRRRKK 8
+F+RR+K
Sbjct: 512 KFKRRRK 518
>sp|US27_HCMVM|ENVELOPE glycoprotein US27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LRFRRRKK 8
L +RR+KK
Sbjct: 58 LYYRRKKK 65
>sp|US27_HCMVA|G-PROTEIN coupled receptor homolog US27|Human cytomegalovirus (strain
Query: 1 LRFRRRKK 8
L +RR+KK
Sbjct: 56 LYYRRKKK 63
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 2 RFRRRKKE 9
RFR RKK+
Sbjct: 394 RFRERKKK 401
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 3 FRRRKKE 9
FRR+K E
Sbjct: 224 FRRKKSE 230
>sp|BEL1_SFV1|PROTEIN Bel-1|Simian foamy virus type 1
Query: 4 RRRKKEG 10
+RR KEG
Sbjct: 220 KRRSKEG 226
376|Sequence|1876|1885|RKKEGPARKG
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 RKKEGPAR 8
RKK GPA+
Sbjct: 211 RKKPGPAK 218
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 RKKEGPAR 8
RKK GPA+
Sbjct: 211 RKKPGPAK 218
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 RKKEGP 6
R+KEGP
Sbjct: 322 RRKEGP 327
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 2 KKEGP 6
KKEGP
Sbjct: 2218 KKEGP 2222
>sp|POLG_EMCVB|GENOME polyprotein|Encephalomyocarditis virus (strain emc-b nondiabetogenic)
Query: 2 KKEGP 6
KKEGP
Sbjct: 2217 KKEGP 2221
>sp|POLG_EMCVD|GENOME polyprotein|Encephalomyocarditis virus (strain emc-d diabetogenic)
Query: 2 KKEGP 6
KKEGP
Sbjct: 2217 KKEGP 2221
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 2 KKEGP 6
KKEGP
Sbjct: 2217 KKEGP 2221
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 2 KKEGP 6
KKEGP
Sbjct: 2215 KKEGP 2219
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
>sp|GD_CHV1|ENVELOPE glycoprotein D|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 5 GPARKG 10
GPAR+G
Sbjct: 387 GPARRG 392
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RKKEGPAR 8
RK++GP +
Sbjct: 1152 RKRQGPKQ 1159
377|Sequence|1881|1890|PARKGAAAIE
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 PARKGAA 7
P RKGAA
Sbjct: 162 PQRKGAA 168
378|Sequence|1886|1895|AAAIEAEDRE
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 4 IEAEDRE 10
+EAEDR+
Sbjct: 749 VEAEDRQ 755
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AAAIEAEDR 9
AAA+++ DR
Sbjct: 1915 AAALKSSDR 1923
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AAAIEAEDR 9
AAA+++ DR
Sbjct: 1915 AAALKSSDR 1923
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AAAIEAEDR 9
AAA+++ DR
Sbjct: 1915 AAALKSSDR 1923
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AAAIEAEDR 9
AAA+++ DR
Sbjct: 1915 AAALKSSDR 1923
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 AAAIEAEDR 9
AAA+++ DR
Sbjct: 1915 AAALKSSDR 1923
379|Sequence|1891|1900|AEDREEEEGE
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 AEDREEEEGE 10
DR + EGE
Sbjct: 1049 GRDRNQVEGE 1058
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 EDREEEEG 9
+ +EE+EG
Sbjct: 1037 DSKEEDEG 1044
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 EDREEEEG 9
+ +EE+EG
Sbjct: 1037 DSKEEDEG 1044
>sp|GE_HHV1F|ENVELOPE glycoprotein E|Human herpesvirus 1 (strain F)
Query: 2 EDREEEEGE 10
+D +E EGE
Sbjct: 179 DDNDEGEGE 187
380|Sequence|1896|1905|EEEGEEEKEA
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 EEEGEEE 7
+EEG+EE
Sbjct: 1658 KEEGKEE 1664
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 1 EEEGEEEKE 9
EE+GE++ E
Sbjct: 275 EEDGEDQGE 283
381|Sequence|1901|1910|EEKEAPTGRE
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 2 EKEAPTG 8
E+E PTG
Sbjct: 51 EQEVPTG 57
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 2 EKEAPTG 8
E+E PTG
Sbjct: 51 EQEVPTG 57
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 4 EAPTGRE 10
EAP GR+
Sbjct: 117 EAPDGRK 123
>sp|UXP_ADE05|U exon protein|Human adenovirus C serotype 5
Query: 1 EEKEAP 6
EEKEAP
Sbjct: 169 EEKEAP 174
>sp|Y10K_HBVD3|PUTATIVE uncharacterized 10.4 kDa protein|Hepatitis B virus genotype D
Query: 2 EKEAPTGRE 10
+ APTGR+
Sbjct: 54 QDSAPTGRK 62
382|Sequence|1906|1915|PTGREKRPSR
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 2 TGREKRPSR 10
T R+K+P R
Sbjct: 458 TERDKKPGR 466
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 REKRPS 9
REK+PS
Sbjct: 2947 REKKPS 2952
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 4 REKRPS 9
REK+PS
Sbjct: 2958 REKKPS 2963
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 GREKRPSR 10
GRE PSR
Sbjct: 222 GREVVPSR 229
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PTGREKRPSR 10
PTGR PS+
Sbjct: 87 PTGRSICPSQ 96
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PTGREKRPSR 10
PTGR PS+
Sbjct: 97 PTGRSICPSQ 106
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PTGREKRPSR 10
PTGR PS+
Sbjct: 97 PTGRSICPSQ 106
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 PTGREKR 7
PTG E+R
Sbjct: 188 PTGSEER 194
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 1 PTGREK 6
P GREK
Sbjct: 468 PVGREK 473
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 PTGREKR 7
PTG E+R
Sbjct: 188 PTGSEER 194
383|Sequence|1911|1920|KRPSRSGGRV
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KRPSRSGG 8
K+P+R+GG
Sbjct: 90 KKPNRNGG 97
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KRPSRSGG 8
K+P+R+GG
Sbjct: 90 KKPNRNGG 97
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KRPSRSGG 8
K+P+R+GG
Sbjct: 90 KKPNRNGG 97
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KRPSRSGG 8
K+P+R+GG
Sbjct: 90 KKPNRNGG 97
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KRPSRSGG 8
K+P+R+GG
Sbjct: 90 KKPNRNGG 97
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 KRPSRSGG 8
K+P+R+GG
Sbjct: 90 KKPNRNGG 97
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 RPSRSGGRV 10
RPSR GG V
Sbjct: 3094 RPSREGGCV 3102
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 RPSRSGG 8
RPSR GG
Sbjct: 3094 RPSRDGG 3100
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 RPSRSGGRV 10
RPSR GG +
Sbjct: 3092 RPSRDGGCI 3100
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 RPSRSGGRV 10
RPSR GG +
Sbjct: 3094 RPSRDGGCI 3102
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 RPSRSGGRV 10
RPSR GG +
Sbjct: 3094 RPSRDGGCI 3102
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 RPSRSGGRV 10
RPSR GG +
Sbjct: 3094 RPSRDGGCI 3102
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 2 RPSRSGGRV 10
RPSR GG +
Sbjct: 3094 RPSRDGGCI 3102
>sp|UL101_HCMVA|UNCHARACTERIZED protein UL101|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 KRPSRSGG 8
+RP+RSGG
Sbjct: 1 RRPARSGG 8
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 RPSRSGGRV 10
RPS SGG V
Sbjct: 3096 RPSSSGGCV 3104
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 RPSRSGGRV 10
RPS SGG V
Sbjct: 3096 RPSSSGGCV 3104
>sp|PG195_MONPV|PROTEIN OPG195|Monkeypox virus (MPXV)
Query: 2 RPSRSGGRV 10
RP+ SGG +
Sbjct: 54 RPTASGGLI 62
>sp|US11_HCMVT|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 5 RSGGRV 10
RSGGR+
Sbjct: 59 RSGGRL 64
>sp|US11_HCMVM|MEMBRANE glycoprotein US11|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 RSGGRV 10
RSGGR+
Sbjct: 59 RSGGRL 64
>sp|US11_HCMVA|UNIQUE short US11 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 5 RSGGRV 10
RSGGR+
Sbjct: 59 RSGGRL 64
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 4 SRSGGRV 10
SR GGR+
Sbjct: 623 SRKGGRL 629
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 SRSGGRV 10
SR GGR+
Sbjct: 683 SRKGGRL 689
>sp|POLG_AIVA8|GENOME polyprotein|Aichi virus (strain Human/A846/88/1989) (AiV)
Query: 3 PSRSGG 8
P RSGG
Sbjct: 214 PGRSGG 219
>sp|Y190_ADE07|UNCHARACTERIZED 19.0 kDa early protein|Human adenovirus B serotype 7
Query: 3 PSRSGGRV 10
PS+S GR+
Sbjct: 127 PSKSTGRI 134
>sp|SHDAG_HDVD3|SMALL delta antigen|Hepatitis delta virus genotype I
Query: 1 KRPSRSG 7
KRPSR G
Sbjct: 87 KRPSRGG 93
>sp|LHDAG_HDVD3|LARGE delta antigen|Hepatitis delta virus genotype I
Query: 1 KRPSRSG 7
KRPSR G
Sbjct: 87 KRPSRGG 93
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 4 SRSGGRV 10
SR GGR+
Sbjct: 754 SRKGGRL 760
384|Sequence|1916|1925|SGGRVRAAGR
>sp|TEG6_HHV2H|TEGUMENT protein UL55|Human herpesvirus 2 (strain HG52)
Query: 2 GGRVRAAG 9
GGR+R G
Sbjct: 104 GGRLRCTG 111
>sp|TEG6_VZVO|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GGRVRAA 8
GG+ RAA
Sbjct: 169 GGKARAA 175
>sp|TEG6_VZVD|TEGUMENT protein UL55 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GGRVRAA 8
GG+ RAA
Sbjct: 169 GGKARAA 175
385|Sequence|1921|1930|RAAGRRLQGF
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 RAAGRR 6
RAAGRR
Sbjct: 255 RAAGRR 260
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 AAGRRL 7
AAGRRL
Sbjct: 2185 AAGRRL 2190
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 AAGRRL 7
AAGRRL
Sbjct: 2185 AAGRRL 2190
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RAAGRRLQGF 10
R+ +RLQG
Sbjct: 206 RSLNKRLQGL 215
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RAAGRRLQGF 10
R+ +RLQG
Sbjct: 206 RSLNKRLQGL 215
386|Sequence|1926|1935|RLQGFCLSLA
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 2 LQGFC 6
LQGFC
Sbjct: 50 LQGFC 54
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 RLQGFCLS 8
RL GFC S
Sbjct: 122 RLAGFCAS 129
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RLQGFCLS 8
RL GFC S
Sbjct: 122 RLAGFCAS 129
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 RLQGFCLS 8
RL GFC S
Sbjct: 122 RLAGFCAS 129
>sp|PAX_I09A0|PROTEIN PA-X|Influenza A virus (strain swl
Query: 1 RLQGFCLSL 9
RLQ C SL
Sbjct: 206 RLQELCASL 214
>sp|HN_PIV5L|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Human/LN)
Query: 1 RLQGFCLS 8
R GFCL+
Sbjct: 453 RCPGFCLT 460
>sp|HN_PIV5|HEMAGGLUTININ-NEURAMINIDASE virus 5 (strain W3)
Query: 1 RLQGFCLS 8
R GFCL+
Sbjct: 453 RCPGFCLT 460
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 5 FCLSLA 10
FCLSL+
Sbjct: 423 FCLSLS 428
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RLQGFCLSLA 10
R +G CLSL
Sbjct: 59 RNEGRCLSLG 68
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RLQGFCLSLA 10
R +G CLSL
Sbjct: 59 RNEGRCLSLG 68
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 1 RLQGFC 6
+L+GFC
Sbjct: 638 QLEGFC 643
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 RLQGFC 6
+L+GFC
Sbjct: 638 QLEGFC 643
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 1 RLQGFC 6
+L+GFC
Sbjct: 638 QLEGFC 643
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 2 LQGFCLSLA 10
Q FC SLA
Sbjct: 1275 FQQFCNSLA 1283
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 3 QGFCLSL 9
QG+CL +
Sbjct: 604 QGYCLRI 610
>sp|DUT_HHV6Z|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6B (strain
Query: 5 FCLSL 9
FCLSL
Sbjct: 344 FCLSL 348
>sp|DUT_HHV6U|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 5 FCLSL 9
FCLSL
Sbjct: 344 FCLSL 348
>sp|DUT_HHV6G|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 6A (strain
Query: 5 FCLSL 9
FCLSL
Sbjct: 344 FCLSL 348
>sp|HN_PIV5D|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI+)
Query: 1 RLQGFCL 7
R GFCL
Sbjct: 453 RCPGFCL 459
>sp|HN_PIV5C|HEMAGGLUTININ-NEURAMINIDASE virus 5 (isolate Canine/CPI-)
Query: 1 RLQGFCL 7
R GFCL
Sbjct: 453 RCPGFCL 459
387|Sequence|1931|1940|CLSLAQGTYR
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 1 CLSLAQGT 8
C++LAQGT
Sbjct: 297 CMTLAQGT 304
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CLSLAQGTY 9
CL+L QGT+
Sbjct: 2056 CLNLWQGTF 2064
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 1 CLSLAQGTY 9
CL++ QGT+
Sbjct: 2056 CLNMWQGTF 2064
>sp|YM2_DHVI1|PUTATIVE uncharacterized protein M2|Dhori virus (strain Indian/1313/61)
Query: 2 LSLAQGTYR 10
LSL +GT+R
Sbjct: 133 LSLERGTHR 141
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 4 LAQGTY 9
LAQGTY
Sbjct: 199 LAQGTY 204
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 SLAQGTY 9
+LA+GTY
Sbjct: 1140 TLAEGTY 1146
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 CLSLAQGTY 9
C+++ QGT+
Sbjct: 2056 CMNIWQGTF 2064
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 CLSLAQGT 8
C++ AQGT
Sbjct: 287 CMTTAQGT 294
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 1 CLSLAQGT 8
C++ AQGT
Sbjct: 287 CMTTAQGT 294
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 CLSLAQGTY 9
C+SLAQ +
Sbjct: 1049 CISLAQQCF 1057
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 CLSLAQGTY 9
C+SLAQ +
Sbjct: 1049 CISLAQQCF 1057
>sp|MATRX_ISFV|MATRIX protein|Isfahan virus (ISFV)
Query: 1 CLSLAQGTYR 10
C+SL + YR
Sbjct: 87 CISLWETDYR 96
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 CLSLAQGTY 9
CL+ QGT+
Sbjct: 2056 CLNTWQGTF 2064
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related
Query: 5 AQGTYR 10
A+GTYR
Sbjct: 12 ARGTYR 17
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 5 AQGTYR 10
A+GTYR
Sbjct: 12 ARGTYR 17
>sp|CRMB_CWPXG|SOLUBLE TNF receptor II|Cowpox virus (strain GRI-90 /
Query: 1 CLSLAQGTY 9
CLS GTY
Sbjct: 44 CLSCPPGTY 52
>sp|CRMB_VARV|CYTOKINE response-modifying protein B|Variola virus
Query: 1 CLSLAQGTY 9
CLS GTY
Sbjct: 44 CLSCPPGTY 52
>sp|CRMB_VAR67|CYTOKINE response-modifying protein B|Variola virus (isolate
Query: 1 CLSLAQGTY 9
CLS GTY
Sbjct: 44 CLSCPPGTY 52
>sp|CRMB_MONPV|SOLUBLE TNF receptor II|Monkeypox virus (MPXV)
Query: 1 CLSLAQGTY 9
CLS GTY
Sbjct: 44 CLSCPPGTY 52
>sp|VPR_HV2D1|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 CLSLAQGTY 9
CL +A G Y
Sbjct: 42 CLLIALGNY 50
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 1 CLSLAQGTY 9
C++ QGT+
Sbjct: 2056 CMNTWQGTF 2064
388|Sequence|1936|1945|QGTYRPLRRF
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 QGTYRPLRRF 10
QG ++ LR F
Sbjct: 183 QGNFKNLREF 192
>sp|ENV_HV1B1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QGTYRPLR 8
QG YR +R
Sbjct: 834 QGAYRAIR 841
>sp|ENV_HV1MF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 QGTYRPLR 8
QG YR +R
Sbjct: 832 QGAYRAIR 839
>sp|TEG5_HHV2H|TEGUMENT protein UL47|Human herpesvirus 2 (strain HG52)
Query: 2 GTYRPLR 8
GTY PLR
Sbjct: 575 GTYTPLR 581
>sp|TEG5_HHV1F|TEGUMENT protein UL47|Human herpesvirus 1 (strain F)
Query: 2 GTYRPLR 8
GTY PLR
Sbjct: 572 GTYTPLR 578
>sp|TEG5_HHV11|TEGUMENT protein UL47|Human herpesvirus 1 (strain 17)
Query: 2 GTYRPLR 8
GTY PLR
Sbjct: 572 GTYTPLR 578
>sp|DNBI_EBVG|MAJOR DNA-binding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QGTYRPLRR 9
+GT+ P RR
Sbjct: 373 EGTWDPCRR 381
>sp|DNBI_EBVB9|MAJOR DNA-binding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QGTYRPLRR 9
+GT+ P RR
Sbjct: 373 EGTWDPCRR 381
>sp|DNBI_EBVA8|MAJOR DNA-binding protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QGTYRPLRR 9
+GT+ P RR
Sbjct: 373 EGTWDPCRR 381
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 795 GIYRPLLRL 803
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 795 GIYRPLLRL 803
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GIYRPLLRL 804
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 2 GTYRPLRRF 10
G Y P R+F
Sbjct: 1261 GMYSPCRQF 1269
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 QGTYRPLRRF 10
QG RPL F
Sbjct: 1028 QGVLRPLPDF 1037
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 798 GLYRPLLRL 806
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 TYRPLRRF 10
T PLRR+
Sbjct: 16 TIHPLRRY 23
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 798 GLYRPLLRL 806
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 798 GLYRPLLRL 806
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 QGTYRPLRRF 10
QG RPL F
Sbjct: 1058 QGVLRPLPDF 1067
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 798 GLYRPLLRL 806
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 791 GLYRPLLRL 799
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 GTYRPLRRF 10
G YRPL R
Sbjct: 796 GLYRPLLRL 804
>sp|RL12_HCMVM|UNCHARACTERIZED protein RL12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YRPLR 8
YRPLR
Sbjct: 392 YRPLR 396
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QGTYRPL 7
+G Y+PL
Sbjct: 547 RGVYKPL 553
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QGTYRPL 7
+G Y+PL
Sbjct: 547 RGVYKPL 553
>sp|RIR1_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 2 (strain 333)
Query: 6 PLRRF 10
PLRRF
Sbjct: 1052 PLRRF 1056
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 GTYRPLRRF 10
G Y P R F
Sbjct: 1266 GLYSPCRAF 1274
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 GTYRPLRRF 10
G Y P R F
Sbjct: 1266 GLYSPCRAF 1274
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 GTYRPLRRF 10
G Y P R F
Sbjct: 1266 GLYSPCRAF 1274
389|Sequence|1941|1950|PLRRFFHDIL
>sp|VP4_ROTHC|OUTER capsid protein VP4|Rotavirus C (isolate RVC/Human/United
Query: 1 PLRRFFHDI 9
P RRF +DI
Sbjct: 655 PTRRFSYDI 663
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 PLRRFFH 7
P R+FFH
Sbjct: 1265 PCRQFFH 1271
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 RRFFHDI 9
RRFF D+
Sbjct: 1327 RRFFFDL 1333
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 RRFFHDI 9
RRFF D+
Sbjct: 1327 RRFFFDL 1333
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 PLRRFFHDI 9
P R FF D+
Sbjct: 129 PARAFFDDV 137
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 PLRRFFHDI 9
P R FF D+
Sbjct: 129 PARAFFDDV 137
>sp|MCP_HHV6Z|MAJOR capsid protein|Human herpesvirus 6B (strain Z29)
Query: 1 PLRRFFHD 8
P RFF D
Sbjct: 915 PFHRFFSD 922
>sp|MCP_HHV6U|MAJOR capsid protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PLRRFFHD 8
P RFF D
Sbjct: 915 PFHRFFSD 922
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 PLRRFFHD 8
P RFF D
Sbjct: 915 PFNRFFSD 922
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LRRFFHD 8
RRF+H+
Sbjct: 649 FRRFYHE 655
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LRRFFHD 8
RRF+H+
Sbjct: 649 FRRFYHE 655
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LRRFFHD 8
RRF+H+
Sbjct: 649 FRRFYHE 655
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|PG096_MONPV|PROTEIN OPG096|Monkeypox virus (MPXV)
Query: 1 PLRRFFHDIL 10
PL R F DIL
Sbjct: 39 PLIRLFIDIL 48
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 PLRRF 5
PLRRF
Sbjct: 228 PLRRF 232
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|BRRF1_EBVG|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PLRRFFHDI 9
PL+ F H++
Sbjct: 11 PLKSFLHEL 19
>sp|BRRF1_EBVB9|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PLRRFFHDI 9
PL+ F H++
Sbjct: 11 PLKSFLHEL 19
>sp|BRRF1_EBVA8|TRANSCRIPTIONAL activator BRRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PLRRFFHDI 9
PL+ F H++
Sbjct: 11 PLKSFLHEL 19
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 3 RRFFHD 8
RRFF D
Sbjct: 357 RRFFRD 362
>sp|SPIKE_CVHN1|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N1)
Query: 3 RRFFHDIL 10
R FF D+L
Sbjct: 904 RSFFEDLL 911
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LRRFFHD 8
LR+F HD
Sbjct: 251 LRQFVHD 257
>sp|PG096_VACCC|PROTEIN OPG096|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PLRRFFHDIL 10
PL R F DIL
Sbjct: 39 PLIRLFIDIL 48
>sp|PG096_VACCA|PROTEIN OPG096|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PLRRFFHDIL 10
PL R F DIL
Sbjct: 39 PLIRLFIDIL 48
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LRRFFHD 8
LR+F HD
Sbjct: 251 LRQFVHD 257
>sp|PG096_VARV|PROTEIN OPG096|Variola virus
Query: 1 PLRRFFHDIL 10
PL R F DIL
Sbjct: 39 PLIRLFIDIL 48
>sp|PG096_VAR67|PROTEIN OPG096|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 PLRRFFHDIL 10
PL R F DIL
Sbjct: 39 PLIRLFIDIL 48
>sp|VL2_HPV32|MINOR capsid protein L2|Human papillomavirus type 32
Query: 5 FFHDI 9
FFHDI
Sbjct: 326 FFHDI 330
>sp|SHUT_ADE12|SHUTOFF protein|Human adenovirus A serotype 12
Query: 2 LRRFFHDI 9
+ RFF DI
Sbjct: 330 MHRFFSDI 337
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLRRFFHDIL 10
PLR + D+L
Sbjct: 356 PLREYLADLL 365
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PLRRFFHDIL 10
PLR + D+L
Sbjct: 356 PLREYLADLL 365
>sp|BTRF1_EBVA8|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PLRRFFHDI 9
P R F+DI
Sbjct: 209 PYARIFYDI 217
>sp|BTRF1_EBVG|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PLRRFFHDI 9
P R F+DI
Sbjct: 209 PYARIFYDI 217
>sp|BTRF1_EBVB9|UNCHARACTERIZED protein BTRF1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PLRRFFHDI 9
P R F+DI
Sbjct: 209 PYARIFYDI 217
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LRRFFHDIL 10
LR+F DIL
Sbjct: 423 LRQFKRDIL 431
>sp|PAP1_VACCT|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Tian Tan)
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_CWPXG|POLY(A) polymerase catalytic subunit|Cowpox virus (strain GRI-90 /
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_CWPXB|POLY(A) polymerase catalytic subunit|Cowpox virus (strain Brighton Red)
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_VACCA|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Ankara)
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_HSPV|POLY(A) polymerase catalytic subunit|Horsepox virus (HSPV)
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_VARV|POLY(A) polymerase catalytic subunit|Variola virus
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_VAR67|POLY(A) polymerase catalytic subunit|Variola virus (isolate
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|PAP1_VACCC|POLY(A) polymerase catalytic subunit|Vaccinia virus (strain Copenhagen)
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFSDV 67
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 FFHDIL 10
FFH IL
Sbjct: 401 FFHTIL 406
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 FFHDIL 10
FFH IL
Sbjct: 401 FFHTIL 406
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 FFHDIL 10
FFH IL
Sbjct: 402 FFHTIL 407
>sp|PAP1_MONPV|POLY(A) polymerase catalytic subunit|Monkeypox virus (MPXV)
Query: 3 RRFFHDI 9
+RFF D+
Sbjct: 61 KRFFFDV 67
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 2 LRRFFHDIL 10
L+ F HDI+
Sbjct: 61 LKLFTHDIM 69
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 2 LRRFFHDIL 10
L+ F HDI+
Sbjct: 61 LKLFTHDIM 69
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LRRFFHDIL 10
L+ F HDI+
Sbjct: 61 LKLFTHDIM 69
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain
Query: 2 LRRFFHDIL 10
L+ F HDI+
Sbjct: 61 LKLFTHDIM 69
390|Sequence|1946|1955|FHDILHTKYR
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 FHDILHTKY 9
FHD+L +KY
Sbjct: 1060 FHDLLLSKY 1068
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 FHDILHTKY 9
FHD+L +KY
Sbjct: 1060 FHDLLLSKY 1068
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 FHDILH 6
FHD++H
Sbjct: 2019 FHDVMH 2024
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 1 FHDILHTKY 9
F D++ TKY
Sbjct: 263 FTDVIRTKY 271
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 1 FHDILHTK 8
F D LH+K
Sbjct: 415 FKDFLHSK 422
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 2 HDILHTKY 9
H ILH KY
Sbjct: 28 HHILHWKY 35
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 DILHTKYR 10
DI H KY+
Sbjct: 1230 DITHFKYK 1237
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHAKY 313
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHAKY 313
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHAKY 313
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHAKY 313
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 DILHTKYR 10
DI H KY+
Sbjct: 1230 DITHFKYK 1237
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 FHDILHTKY 9
F D+L +KY
Sbjct: 1052 FRDLLMSKY 1060
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 3 DILHTKYR 10
DI H KY+
Sbjct: 1230 DITHFKYK 1237
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 3 DILHTKY 9
D LH KY
Sbjct: 1182 DTLHEKY 1188
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 DILHTKYR 10
DIL +KY+
Sbjct: 1847 DILRSKYQ 1854
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 5 LHTKYR 10
+HT+YR
Sbjct: 1219 IHTEYR 1224
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 5 LHTKYR 10
+HT+YR
Sbjct: 1218 IHTEYR 1223
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 5 LHTKYR 10
+HT+YR
Sbjct: 1219 IHTEYR 1224
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 292 DCLHEKY 298
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 309 DCLHEKY 315
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 309 DCLHEKY 315
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 302 DCLHEKY 308
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 300 DCLHEKY 306
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 304 DCLHEKY 310
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 309 DCLHEKY 315
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 302 DCLHEKY 308
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 298 DCLHEKY 304
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 308 DCLHEKY 314
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 309 DCLHEKY 315
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 305 DCLHEKY 311
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 3 DILHTKY 9
D LH KY
Sbjct: 299 DCLHEKY 305
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 302 DCLHEKY 308
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 292 DCLHEKY 298
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 294 DCLHEKY 300
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 299 DCLHEKY 305
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 307 DCLHEKY 313
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 3 DILHTKY 9
D LH KY
Sbjct: 309 DCLHEKY 315
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 3 DILHTKY 9
D LH KY
Sbjct: 301 DCLHEKY 307
>sp|US24_HCMVM|TEGUMENT protein US24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FHDILHTKYR 10
+ D++HT R
Sbjct: 169 YRDVIHTTLR 178
>sp|US24_HCMVA|TEGUMENT protein US24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FHDILHTKYR 10
+ D++HT R
Sbjct: 169 YRDVIHTTLR 178
>sp|PG042_MONPV|VIRION nicking-joining enzyme|Monkeypox virus (MPXV)
Query: 4 ILHTKY 9
+LHTK+
Sbjct: 113 VLHTKF 118
>sp|PG042_VACCC|VIRION nicking-joining enzyme|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 ILHTKY 9
+LHTK+
Sbjct: 113 VLHTKF 118
>sp|UL33_HHV6U|G-PROTEIN coupled receptor homolog U12|Human herpesvirus 6A (strain
Query: 1 FHDILHTKYR 10
HD+ KY+
Sbjct: 219 LHDVTEKKYK 228
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 2 HDILH 6
HD+LH
Sbjct: 726 HDLLH 730
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 2 HDILH 6
HD+LH
Sbjct: 726 HDLLH 730
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 2 HDILH 6
HD+LH
Sbjct: 727 HDLLH 731
391|Sequence|1951|1960|HTKYRAATDV
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 1 HTKYRAAT 8
HT+YRA +
Sbjct: 498 HTQYRAKS 505
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 3 KYRAATDV 10
KY+A TD+
Sbjct: 800 KYKAFTDI 807
>sp|DNBI_HHV2H|MAJOR DNA-binding protein|Human herpesvirus 2 (strain HG52)
Query: 4 YRAATD 9
YRAAT+
Sbjct: 575 YRAATE 580
>sp|DNBI_HHV1K|MAJOR DNA-binding protein|Human herpesvirus 1 (strain KOS)
Query: 4 YRAATD 9
YRAAT+
Sbjct: 575 YRAATE 580
>sp|DNBI_HHV2|MAJOR DNA-binding protein|Human herpesvirus 2 (HHV-2) (Human
Query: 4 YRAATD 9
YRAAT+
Sbjct: 575 YRAATE 580
>sp|DNBI_HHV11|MAJOR DNA-binding protein|Human herpesvirus 1 (strain 17)
Query: 4 YRAATD 9
YRAAT+
Sbjct: 575 YRAATE 580
>sp|DNBI_HHV1F|MAJOR DNA-binding protein|Human herpesvirus 1 (strain F)
Query: 4 YRAATD 9
YRAAT+
Sbjct: 575 YRAATE 580
392|Sequence|1956|1965|AATDVYALMF
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 440 AATAIYCLM 448
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 440 AATAIYCLM 448
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 440 AATAIYCLM 448
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 440 AATAIYCLM 448
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 441 AATAIYCLM 449
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 AATDVYALM 9
AAT +Y LM
Sbjct: 440 AATAIYCLM 448
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 2 ATDVYA 7
+TDVYA
Sbjct: 1010 STDVYA 1015
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 AATDVYALMF 10
A VYAL+F
Sbjct: 536 ANDSVYALVF 545
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 TDVYALM 9
TDVYA +
Sbjct: 540 TDVYATL 546
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 TDVYALM 9
TDVYA +
Sbjct: 540 TDVYATL 546
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 TDVYALM 9
TDVYA +
Sbjct: 540 TDVYATL 546
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 4 DVYALMF 10
D+++LMF
Sbjct: 3771 DIFSLMF 3777
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 4 DVYALMF 10
D+++LMF
Sbjct: 3721 DIFSLMF 3727
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 4 DVYALMF 10
D+++LMF
Sbjct: 3741 DIFSLMF 3747
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 4 DVYALMF 10
D+++LMF
Sbjct: 3771 DIFSLMF 3777
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 4 DVYALMF 10
D+++LMF
Sbjct: 3721 DIFSLMF 3727
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 4 DVYALMF 10
D+++LMF
Sbjct: 3741 DIFSLMF 3747
393|Sequence|1961|1970|YALMFLADVV
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
Y+L ++ DVV
Sbjct: 166 YSLFYVEDVV 175
>sp|ENV_HV1YB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
Y+L ++ DVV
Sbjct: 163 YSLFYVEDVV 172
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 169 YALFYRQDVV 178
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 167 YALFYRQDVV 176
>sp|ENV_HV1MN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL++ D+V
Sbjct: 178 YALLYKLDIV 187
>sp|ENV_HV1W2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 168 YALFYKLDVV 177
>sp|ENV_HV1W1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 168 YALFYKLDVV 177
>sp|ENV_HV1SC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 176 YALFYKLDVV 185
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 171 YALFYKLDVV 180
>sp|ENV_HV1RH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 173 YALFYKLDVV 182
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 174 YALFYKLDVV 183
>sp|ENV_HV1KB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 176 YALFYKLDVV 185
>sp|ENV_HV1JR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 170 YALFYKLDVV 179
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 170 YALFYKLDVV 179
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 YALMFLADVV 10
Y L FL DV+
Sbjct: 1301 YCLDFLFDVI 1310
>sp|ENV_HV1Y2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + DVV
Sbjct: 171 YALFYNLDVV 180
>sp|ENV_HV1N5|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + D+V
Sbjct: 168 YALFYRLDIV 177
>sp|ENV_HV1EL|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + D+V
Sbjct: 170 YALFYRLDIV 179
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 YALMFLADVV 10
YAL L DV+
Sbjct: 1311 YALDLLYDVI 1320
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 YALMFLADVV 10
YAL L DV+
Sbjct: 1312 YALDLLYDVI 1321
>sp|ENV_HV1ND|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + D+V
Sbjct: 164 YALFYKLDIV 173
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + D+V
Sbjct: 170 YALFYKLDIV 179
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 YALMFLADVV 10
YAL + D+V
Sbjct: 171 YALFYKLDIV 180
394|Sequence|1966|1975|LADVVDFIII
>sp|VE1_HPV16|REPLICATION protein E1|Human papillomavirus type 16
Query: 3 DVVDFII 9
D+VDFI+
Sbjct: 47 DLVDFIV 53
>sp|VE1_HPV59|REPLICATION protein E1|Human papillomavirus 59
Query: 2 ADVVDFI 8
+D+VDFI
Sbjct: 45 SDLVDFI 51
>sp|VE1_HPV45|REPLICATION protein E1|Human papillomavirus 45
Query: 2 ADVVDFI 8
+D+VDFI
Sbjct: 45 SDMVDFI 51
>sp|VE1_HPV18|REPLICATION protein E1|Human papillomavirus type 18
Query: 2 ADVVDFI 8
+D+VDFI
Sbjct: 45 SDMVDFI 51
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 LADVVDFII 9
LAD DF++
Sbjct: 962 LADASDFVM 970
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 LADVVDFII 9
LAD DF++
Sbjct: 962 LADASDFVM 970
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 LADVVDFII 9
LAD DF++
Sbjct: 962 LADASDFVM 970
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 LADVVDFII 9
LAD DF++
Sbjct: 962 LADASDFVM 970
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 LADVVDFII 9
LAD DF++
Sbjct: 962 LADASDFVM 970
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 DVVDFI 8
D++DFI
Sbjct: 12 DIIDFI 17
>sp|V_HENDH|NON-STRUCTURAL protein V|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 DVVDFI 8
D++DFI
Sbjct: 12 DIIDFI 17
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 DVVDFI 8
D++DFI
Sbjct: 12 DIIDFI 17
>sp|VE1_HPV72|REPLICATION protein E1|Human papillomavirus 72
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 51 DLVDFI 56
>sp|VE1_HPV61|REPLICATION protein E1|Human papillomavirus type 61
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 51 DLVDFI 56
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 46 DMVDFI 51
>sp|VE1_HPV6A|REPLICATION protein E1|Human papillomavirus type 6a
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 46 DMVDFI 51
>sp|VE1_HPV54|REPLICATION protein E1|Human papillomavirus type 54
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 46 DMVDFI 51
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 44 DMVDFI 49
>sp|VE1_HPV35|REPLICATION protein E1|Human papillomavirus 35
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 47 DMVDFI 52
>sp|VE1_HPV31|REPLICATION protein E1|Human papillomavirus 31
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 46 DMVDFI 51
>sp|VE1_HPV13|REPLICATION protein E1|Human papillomavirus 13
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 46 DMVDFI 51
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 46 DMVDFI 51
>sp|VE1_HPV07|REPLICATION protein E1|Human papillomavirus 7
Query: 3 DVVDFI 8
D+VDFI
Sbjct: 47 DMVDFI 52
395|Sequence|1971|1980|DFIIIIFGFW
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 2 FIIIIFGFW 10
FIII+ FW
Sbjct: 1578 FIIILQQFW 1586
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 FIIIIFGFW 10
FI+I+ FW
Sbjct: 1578 FIMILQQFW 1586
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 FIIIIFGFW 10
FI+I+ FW
Sbjct: 1578 FIMILQQFW 1586
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 IIIIFGFW 10
I+++FGF+
Sbjct: 828 ILVLFGFF 835
Query: 1 DFIIIIF 7
+F+I+IF
Sbjct: 723 EFVILIF 729
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 4 IIIFGFW 10
+++FG W
Sbjct: 117 LLVFGIW 123
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 DFIIIIF 7
D+I+I+F
Sbjct: 717 DYIVILF 723
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 IIIIFGFW 10
++++FGF+
Sbjct: 828 VLVLFGFF 835
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 IIIIFGFW 10
III +G W
Sbjct: 100 IIIAYGEW 107
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 1 DFIIIIF 7
+F+I+IF
Sbjct: 722 EFVILIF 728
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 IIIIFGFW 10
I+I +G W
Sbjct: 100 IVIAYGEW 107
>sp|CVC2_HHV2H|CAPSID vertex component 2|Human herpesvirus 2 (strain HG52)
Query: 5 IIFGFW 10
++FG W
Sbjct: 178 VVFGTW 183
>sp|CVC2_HHV11|CAPSID vertex component 2|Human herpesvirus 1 (strain 17)
Query: 5 IIFGFW 10
++FG W
Sbjct: 173 VVFGTW 178
396|Sequence|1976|1985|IFGFWAFGKH
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 IFGFWAFGKH 10
+ GFW GKH
Sbjct: 1487 VLGFWLLGKH 1496
>sp|HBSAG_HBVH3|LARGE envelope protein|Hepatitis B virus genotype H
Query: 5 WAFGKH 10
WAFGK+
Sbjct: 330 WAFGKY 335
>sp|HBSAG_HBVH1|LARGE envelope protein|Hepatitis B virus genotype H
Query: 5 WAFGKH 10
WAFGK+
Sbjct: 330 WAFGKY 335
>sp|HBSAG_HBVH2|LARGE envelope protein|Hepatitis B virus genotype H
Query: 5 WAFGKH 10
WAFGK+
Sbjct: 330 WAFGKY 335
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 4 FWAFGKH 10
WAF KH
Sbjct: 420 LWAFRKH 426
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 4 FWAFGKH 10
WAF KH
Sbjct: 420 LWAFRKH 426
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 4 FWAFGKH 10
WAF KH
Sbjct: 420 LWAFRKH 426
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 5 WAFGKH 10
WAF KH
Sbjct: 421 WAFRKH 426
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 GFWAFGK 9
G WA+GK
Sbjct: 1029 GAWAYGK 1035
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 GFWAFG 8
G W+FG
Sbjct: 796 GLWSFG 801
>sp|TEG7_EBVG|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 GFWAFGK 9
G W FG+
Sbjct: 12 GLWLFGR 18
>sp|TEG7_EBVB9|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 GFWAFGK 9
G W FG+
Sbjct: 12 GLWLFGR 18
>sp|TEG7_EBVA8|TEGUMENT protein UL51 homolog|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 GFWAFGK 9
G W FG+
Sbjct: 12 GLWLFGR 18
>sp|HBSAG_HBVD5|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 WAFGK 9
WAFGK
Sbjct: 319 WAFGK 323
>sp|HBSAG_HBVD7|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 WAFGK 9
WAFGK
Sbjct: 319 WAFGK 323
>sp|HBSAG_HBVD2|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 WAFGK 9
WAFGK
Sbjct: 319 WAFGK 323
>sp|HBSAG_HBVD3|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 WAFGK 9
WAFGK
Sbjct: 319 WAFGK 323
>sp|HBSAG_HBVD1|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 WAFGK 9
WAFGK
Sbjct: 319 WAFGK 323
>sp|HBSAG_HBVD4|LARGE envelope protein|Hepatitis B virus genotype D
Query: 5 WAFGK 9
WAFGK
Sbjct: 319 WAFGK 323
>sp|HBSAG_HBVC7|LARGE envelope protein|Hepatitis B virus genotype C
Query: 5 WAFGK 9
WAFGK
Sbjct: 330 WAFGK 334
>sp|HBSAG_HBVE1|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 WAFGK 9
WAFGK
Sbjct: 329 WAFGK 333
>sp|HBSAG_HBVE4|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 WAFGK 9
WAFGK
Sbjct: 329 WAFGK 333
>sp|HBSAG_HBVE2|LARGE envelope protein|Hepatitis B virus genotype E
Query: 5 WAFGK 9
WAFGK
Sbjct: 329 WAFGK 333
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 2 FGFWA 6
F FWA
Sbjct: 616 FSFWA 620
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 FGFWA 6
F FWA
Sbjct: 617 FSFWA 621
>sp|NS1AB_HASV8|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-8 (HAstV-8)
Query: 1 IFGFW 5
IFG W
Sbjct: 1298 IFGMW 1302
>sp|NS1AB_HASV5|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-5 (HAstV-5)
Query: 1 IFGFW 5
IFG W
Sbjct: 1297 IFGMW 1301
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 1 IFGFW 5
IFG W
Sbjct: 1296 IFGMW 1300
>sp|NS1AB_HASV1|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-1 (HAstV-1)
Query: 1 IFGFW 5
IFG W
Sbjct: 1317 IFGMW 1321
>sp|LMP1_EBVC|LATENT membrane protein 1|Epstein-Barr virus (strain Cao) (HHV-4)
Query: 1 IFGFWAF 7
+FG W +
Sbjct: 119 VFGIWIY 125
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 WAFG 8
WAFG
Sbjct: 1251 WAFG 1254
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 WAFG 8
WAFG
Sbjct: 1251 WAFG 1254
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 WAFG 8
WAFG
Sbjct: 1249 WAFG 1252
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 WAFG 8
WAFG
Sbjct: 1255 WAFG 1258
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 WAFG 8
WAFG
Sbjct: 1257 WAFG 1260
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 WAFG 8
WAFG
Sbjct: 1257 WAFG 1260
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 WAFG 8
WAFG
Sbjct: 1257 WAFG 1260
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 98 MISLWLYGAH 107
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 1 IFGFWAFGKH 10
+ W +G H
Sbjct: 99 MISLWLYGAH 108
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 IFGFWAF 7
++G W+F
Sbjct: 275 LYGCWSF 281
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 IFGFWAF 7
++G W+F
Sbjct: 275 LYGCWSF 281
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 5 WAFGKH 10
WA GK+
Sbjct: 330 WALGKY 335
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 5 WAFGKH 10
WA GK+
Sbjct: 330 WALGKY 335
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 5 WAFGKH 10
WA GK+
Sbjct: 330 WALGKY 335
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 5 WAFGKH 10
WA GK+
Sbjct: 330 WALGKY 335
397|Sequence|1981|1990|AFGKHSAATD
>sp|GAG_SFV3L|GAG polyprotein|Simian foamy virus type 3
Query: 2 FGKHSAATD 10
G+HSAA +
Sbjct: 310 LGRHSAAIE 318
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 FGKHSAAT 9
F KH AAT
Sbjct: 586 FRKHPAAT 593
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 AFGKHSAAT 9
AFG H A T
Sbjct: 236 AFGIHGAYT 244
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 FGKHSAATD 10
+GK A TD
Sbjct: 1419 YGKQMAGTD 1427
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 FGKHSAATD 10
+GK A TD
Sbjct: 1417 YGKQMAGTD 1425
>sp|VE2_HPV07|REGULATORY protein E2|Human papillomavirus 7
Query: 4 KHSAATD 10
+H AATD
Sbjct: 211 RHPAATD 217
>sp|VE7_HPV52|PROTEIN E7|Human papillomavirus 52
Query: 5 HSAATD 10
HS ATD
Sbjct: 72 HSTATD 77
398|Sequence|1986|1995|SAATDITSSL
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 SAATDITSSL 10
S TDITSS+
Sbjct: 1897 SQITDITSSM 1906
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 SAATDITSSL 10
S TDITSS+
Sbjct: 1897 SQITDITSSM 1906
399|Sequence|1991|2000|ITSSLSDDQV
>sp|HEMA_I71A3|HEMAGGLUTININ A virus (strain A/Equine/Tokyo/1971
Query: 1 ITSSLSDDQV 10
+ +L+DDQ+
Sbjct: 40 LVKTLTDDQI 49
>sp|VL1_HPV13|MAJOR capsid protein L1|Human papillomavirus 13
Query: 2 TSSLSD 7
TSSLSD
Sbjct: 343 TSSLSD 348
400|Sequence|1996|2005|SDDQVPEAFL
>sp|TOP1_VAR67|DNA topoisomerase 1|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 SDDQVPEAFL 10
+DD PE FL
Sbjct: 190 TDDSSPEEFL 199
>sp|TOP1_VACCC|DNA topoisomerase 1B|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 SDDQVPEAFL 10
+DD PE FL
Sbjct: 190 TDDSSPEEFL 199
>sp|TOP1_VACCA|DNA topoisomerase 1B|Vaccinia virus (strain Ankara) (VACV)
Query: 1 SDDQVPEAFL 10
+DD PE FL
Sbjct: 190 TDDSSPEEFL 199
>sp|TOP1_MONPV|DNA topoisomerase I|Monkeypox virus (MPXV)
Query: 1 SDDQVPEAFL 10
+DD PE FL
Sbjct: 190 TDDSSPEEFL 199
>sp|VU10_HHV7J|U10 protein|Human herpesvirus 7 (strain JI)
Query: 4 QVPEAF 9
Q+PEAF
Sbjct: 223 QIPEAF 228
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DQVPEAFL 10
D VPEA+L
Sbjct: 591 DPVPEAYL 598
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DQVPEAFL 10
D VPEA+L
Sbjct: 591 DPVPEAYL 598
>sp|ITP_HHV8P|INNER tegument protein|Human herpesvirus 8 type P
Query: 2 DDQVPEAFL 10
D Q P AFL
Sbjct: 629 DAQCPHAFL 637
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 5 VPEAFL 10
VPEAFL
Sbjct: 32 VPEAFL 37
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 1 SDDQVPE 7
+DD VPE
Sbjct: 146 TDDPVPE 152
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 1 SDDQVPE 7
+DD VPE
Sbjct: 146 TDDPVPE 152
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 1 SDDQVPE 7
+DD VPE
Sbjct: 146 TDDPVPE 152
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2153 AERDAPEAFL 2162
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2153 AERDAPEAFL 2162
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2153 AERDAPEAFL 2162
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2153 AERDAPEAFL 2162
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2153 AERDAPEAFL 2162
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2153 AERDAPEAFL 2162
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2155 AERDAPEAFL 2164
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 SDDQVPEAFL 10
++ PEAFL
Sbjct: 2155 AERDAPEAFL 2164
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 DDQVPE 7
DD +PE
Sbjct: 537 DDNIPE 542
>sp|PG056_MONPV|PROTEIN OPG056|Monkeypox virus (MPXV)
Query: 2 DDQVPE 7
DD +PE
Sbjct: 537 DDNIPE 542
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 5 VPEAFL 10
VP+AFL
Sbjct: 32 VPQAFL 37
401|Sequence|2001|2010|PEAFLVMLLI
>sp|RIR2_HHV2H|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain HG52)
Query: 1 PEAFLVMLLI 10
PE F++M+LI
Sbjct: 174 PEKFILMILI 183
>sp|RIR2_HHV23|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 2 (strain 333)
Query: 1 PEAFLVMLLI 10
PE F++M+LI
Sbjct: 174 PEKFILMILI 183
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 1 PEAFLVMLLI 10
PE F++M+LI
Sbjct: 177 PEKFILMILI 186
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 1 PEAFLVMLLI 10
PE F++M+LI
Sbjct: 177 PEKFILMILI 186
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLIVLLI 2213
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2202 EFFLIVLLI 2210
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLIVLLI 2213
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLIVLLI 2213
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLIVLLI 2213
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLIVLLI 2213
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLIVLLI 2213
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 PEAFLVMLLI 10
PE LV LLI
Sbjct: 144 PEKILVFLLI 153
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PEAFLVMLLI 10
PE LV LLI
Sbjct: 144 PEKILVFLLI 153
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PEAFLVMLLI 10
PE LV LLI
Sbjct: 144 PEKILVFLLI 153
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 PEAFLVMLLI 10
PEA + LL+
Sbjct: 2150 PEATTIFLLV 2159
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2204 EFFLMVLLI 2212
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2204 EFFLMVLLI 2212
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2204 EFFLMVLLI 2212
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2204 EFFLMVLLI 2212
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2206 EFFLMVLLI 2214
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2205 EFFLMVLLI 2213
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 EAFLVMLLI 10
E FL++LLI
Sbjct: 2206 EFFLMVLLI 2214
402|Sequence|2006|2015|VMLLIQFSTM
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 3 LLIQFSTM 10
LL++F TM
Sbjct: 2450 LLVKFDTM 2457
403|Sequence|2011|2020|QFSTMVVDRA
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 2 FSTMVVD 8
+ST+VVD
Sbjct: 587 YSTLVVD 593
>sp|VL2_HPV58|MINOR capsid protein L2|Human papillomavirus 58
Query: 1 QFSTMVVDRA 10
F+T++VD A
Sbjct: 434 PFNTIIVDGA 443
>sp|NCAP_RVFVZ|NUCLEOPROTEIN valley fever virus (strain
Query: 1 QFSTMVVDR 9
QF+ VDR
Sbjct: 10 QFAAQAVDR 18
>sp|NCAP_RVFV|NUCLEOPROTEIN valley fever virus (RVFV)
Query: 1 QFSTMVVDR 9
QF+ VDR
Sbjct: 10 QFAAQAVDR 18
>sp|VL2_HPV33|MINOR capsid protein L2|Human papillomavirus 33
Query: 1 QFSTMVVDRA 10
F T+VVD A
Sbjct: 429 PFDTIVVDGA 438
>sp|VP2_ROTGI|INNER capsid protein VP2|Rotavirus B (isolate RVB/Rat/United
Query: 2 FSTMVVDRA 10
F T V+D+A
Sbjct: 176 FETYVLDKA 184
404|Sequence|2016|2025|VVDRALYLRK
>sp|E4OR1_ADE09|E4-ORF1 adenovirus D serotype 9
Query: 3 DRALYLRK 10
DR LY+RK
Sbjct: 95 DRFLYVRK 102
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 VDRALYL 8
V+RALYL
Sbjct: 19 VERALYL 25
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 2 VDRALYL 8
V+RALYL
Sbjct: 19 VERALYL 25
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 2 VDRALYL 8
V+RALYL
Sbjct: 19 VERALYL 25
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 VDRALYL 8
V+RALYL
Sbjct: 19 VERALYL 25
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 2 VDRALYL 8
V+RALYL
Sbjct: 19 VERALYL 25
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 2 VDRALYL 8
V+RALYL
Sbjct: 19 VERALYL 25
>sp|SCAF_VZVD|CAPSID scaffolding protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 VDRALYL 8
++RALYL
Sbjct: 105 LERALYL 111
405|Sequence|2021|2030|LYLRKTVLGK
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 3 LRKTVLGK 10
LR+T+LG+
Sbjct: 426 LRRTLLGE 433
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 3 LRKTVLGK 10
LR+T+LG+
Sbjct: 426 LRRTLLGE 433
>sp|PG191_MONPV|PROTEIN OPG191|Monkeypox virus (MPXV)
Query: 1 LYLRKTVLGK 10
+Y+R+T++ K
Sbjct: 137 IYIRRTMMDK 146
406|Sequence|2026|2035|TVLGKLAFQV
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 1 TVLGKL 6
TVLGKL
Sbjct: 611 TVLGKL 616
407|Sequence|2031|2040|LAFQVALVLA
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 LAFQVA 6
LAFQVA
Sbjct: 2036 LAFQVA 2041
408|Sequence|2036|2045|ALVLAIHLWM
>sp|PRO_HTL3P|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 LAIHLWM 10
LAIH W+
Sbjct: 19 LAIHHWL 25
>sp|PRO_HTL32|GAG-PRO polyprotein|Human T-cell leukemia virus 3
Query: 4 LAIHLWM 10
LAIH W+
Sbjct: 19 LAIHHWL 25
>sp|GAG_HTL3P|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 LAIHLWM 10
LAIH W+
Sbjct: 19 LAIHHWL 25
>sp|GAG_HTL32|GAG polyprotein|Human T-cell leukemia virus 3
Query: 4 LAIHLWM 10
LAIH W+
Sbjct: 19 LAIHHWL 25
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 1 ALVLAIHLWM 10
A +LA+ +WM
Sbjct: 957 AAILAMPMWM 966
>sp|VICA_HCMVM|VIRAL inhibitor of caspase-8-induced apoptosis|Human cytomegalovirus
Query: 4 LAIHLW 9
LA HLW
Sbjct: 371 LATHLW 376
>sp|UL36_HCMVA|UNCHARACTERIZED protein UL36|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LAIHLW 9
LA HLW
Sbjct: 371 LATHLW 376
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 LAIHLW 9
+A+HLW
Sbjct: 135 IALHLW 140
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 LAIHLW 9
+A+HLW
Sbjct: 135 IALHLW 140
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 LAIHLW 9
+A+HLW
Sbjct: 135 IALHLW 140
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 LAIHLW 9
+A+HLW
Sbjct: 135 IALHLW 140
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 LAIHLW 9
+A+HLW
Sbjct: 135 IALHLW 140
>sp|POL_HTL32|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 LAIHLWM 10
LAIH W+
Sbjct: 19 LAIHHWL 25
>sp|POL_HTL3P|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 3
Query: 4 LAIHLWM 10
LAIH W+
Sbjct: 19 LAIHHWL 25
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 LVLAIHLW 9
L AIH+W
Sbjct: 130 LQAAIHVW 137
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 4 LAIHLW 9
LA+HLW
Sbjct: 118 LAMHLW 123
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 4 LAIHLW 9
LA+HLW
Sbjct: 118 LAMHLW 123
>sp|SCAF_EBVG|CAPSID scaffolding protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 VLAIHLWM 10
V A+H W+
Sbjct: 105 VEALHAWL 112
>sp|SCAF_EBVB9|CAPSID scaffolding protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 VLAIHLWM 10
V A+H W+
Sbjct: 105 VEALHAWL 112
409|Sequence|2041|2050|IHLWMFFILP
>sp|BRRF2_EBVG|TEGUMENT protein BRRF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 HLWMFFIL 9
HL MFFIL
Sbjct: 218 HLNMFFIL 225
>sp|BRRF2_EBVB9|TEGUMENT protein BRRF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 HLWMFFIL 9
HL MFFIL
Sbjct: 218 HLNMFFIL 225
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HLWMFFIL 9
HL MFFIL
Sbjct: 218 HLNMFFIL 225
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 3 LWMFFILP 10
LW+F ++P
Sbjct: 323 LWIFIVIP 330
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LWMFFILP 10
LW+F ++P
Sbjct: 323 LWIFTVIP 330
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 665 WMHFLIP 671
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 665 WMHFLIP 671
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 667 WMHFLIP 673
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 667 WMHFLIP 673
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 667 WMHFLIP 673
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 667 WMHFLIP 673
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 WMFFIL 9
W+FF+L
Sbjct: 12 WVFFVL 17
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 4 WMFFILP 10
WM F++P
Sbjct: 667 WMHFLIP 673
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 WMFFIL 9
W+FF+L
Sbjct: 12 WVFFVL 17
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 HLWMFFIL 9
+LWM F++
Sbjct: 734 YLWMMFMV 741
>sp|GN_HHV6Z|ENVELOPE glycoprotein N|Human herpesvirus 6B (strain Z29)
Query: 1 IHLWMFFIL 9
+ LW+F+IL
Sbjct: 13 VSLWLFYIL 21
>sp|CAPSD_HEVHY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 5 MFFILP 10
+FF+LP
Sbjct: 535 IFFVLP 540
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 4 WMFFILP 10
WM +++P
Sbjct: 664 WMHYLIP 670
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 4 WMFFILP 10
WM +++P
Sbjct: 664 WMHYLIP 670
>sp|HEMA_HUTV|HEMAGGLUTININ-ESTERASE torovirus (HuTV)
Query: 4 WMFFILP 10
W+ F+LP
Sbjct: 178 WVQFVLP 184
>sp|PKG3_ADE12|PACKAGING protein 3|Human adenovirus A serotype 12
Query: 1 IHLWMF 6
+HLW F
Sbjct: 169 MHLWDF 174
>sp|PKG3_ADE05|PACKAGING protein 3|Human adenovirus C serotype 5
Query: 1 IHLWMF 6
+HLW F
Sbjct: 192 MHLWDF 197
>sp|PKG3_ADE02|PACKAGING protein 3|Human adenovirus C serotype 2
Query: 1 IHLWMF 6
+HLW F
Sbjct: 192 MHLWDF 197
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 WMFF 7
WMFF
Sbjct: 315 WMFF 318
>sp|LMP1_EBVG|LATENT membrane protein 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 LWMFFI 8
LW++F+
Sbjct: 122 LWIYFL 127
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 LWMFF 7
LW FF
Sbjct: 1969 LWQFF 1973
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 LWMFF 7
LW FF
Sbjct: 1969 LWQFF 1973
410|Sequence|2046|2055|FFILPAVTER
>sp|VP3_CTFVL|UNCHARACTERIZED protein VP3|Colorado tick fever virus (strain
Query: 2 FILPAVTE 9
FILPA+ E
Sbjct: 152 FILPAMYE 159
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FFILPAV 7
F+ILP++
Sbjct: 1353 FYILPSI 1359
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FFILPAV 7
F+ILP++
Sbjct: 1353 FYILPSI 1359
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 FFILPA 6
FF+LP+
Sbjct: 1595 FFVLPS 1600
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 FFILPA 6
FF+LP+
Sbjct: 1595 FFVLPS 1600
>sp|ENV_HV1YF|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 ILPAVTER 10
+LP VTE+
Sbjct: 76 LLPNVTEK 83
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 2 FILPAVT 8
FILPA+T
Sbjct: 50 FILPALT 56
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 FILPAVTER 10
F PAVTE+
Sbjct: 1737 FHSPAVTEQ 1745
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 FFILPAVTER 10
F++ P++T+R
Sbjct: 501 FYLHPSLTKR 510
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 628 YLIPAVT 634
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 628 YLIPAVT 634
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 628 YLIPAVT 634
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 629 YLIPAVT 635
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 628 YLIPAVT 634
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 628 YLIPAVT 634
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 FILPAVT 8
+++PAVT
Sbjct: 628 YLIPAVT 634
411|Sequence|2051|2060|AVTERMFNQN
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 VTERMFNQ 9
VTER+F Q
Sbjct: 1258 VTERIFRQ 1265
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 VTERMFNQ 9
+T+R+FN+
Sbjct: 76 ITKRLFNK 83
Query: 2 VTERMFNQ 9
VTE+ +N+
Sbjct: 54 VTEKFYNE 61
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 2 VTERMFNQ 9
+T+R+FN+
Sbjct: 76 ITKRLFNK 83
Query: 2 VTERMFNQ 9
VTE+ +N+
Sbjct: 54 VTEKFYNE 61
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 1 AVTERMFNQN 10
AVT FN+N
Sbjct: 274 AVTVHCFNEN 283
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 AVTERMFNQN 10
AVT FN+N
Sbjct: 274 AVTVHCFNEN 283
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 1 AVTERMFNQN 10
AVT FN+N
Sbjct: 274 AVTVHCFNEN 283
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 AVTERMFNQN 10
AVT FN+N
Sbjct: 274 AVTVHCFNEN 283
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 4 ERMFNQN 10
+RM+N N
Sbjct: 52 DRMYNMN 58
412|Sequence|2056|2065|MFNQNVVAQL
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 MFNQNVVA 8
+FN NVVA
Sbjct: 241 LFNLNVVA 248
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 287 FNQNLEYQI 295
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 287 FNQNLEYQI 295
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 306 FNQNLEYQI 314
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 306 FNQNLEYQI 314
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 278 FNQNLEYQI 286
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 291 FNQNLEYQI 299
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 306 FNQNLEYQI 314
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 306 FNQNLEYQI 314
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 286 FNQNLEYQI 294
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 FNQNVVAQL 10
FNQN+ Q+
Sbjct: 306 FNQNLEYQI 314
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 MFNQNVVAQL 10
+FN+ VAQ+
Sbjct: 1548 IFNKATVAQI 1557
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 FNQNVVA 8
FN N+VA
Sbjct: 418 FNGNIVA 424
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 FNQNVVA 8
FN N+VA
Sbjct: 418 FNGNIVA 424
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 MFNQNVVAQL 10
+FN+ VAQ+
Sbjct: 1548 IFNKATVAQI 1557
>sp|FUS_PIV5|FUSION glycoprotein F0|Parainfluenza virus 5 (strain W3)
Query: 3 NQNVVAQL 10
NQ V+AQL
Sbjct: 298 NQEVMAQL 305
413|Sequence|2061|2070|VVAQLWYFVK
>sp|DUT_VZVO|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 6 WYFVK 10
WYF K
Sbjct: 360 WYFTK 364
>sp|DUT_VZVD|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Varicella-zoster virus (strain
Query: 6 WYFVK 10
WYF K
Sbjct: 360 WYFTK 364
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 6 WYFVK 10
WYFV+
Sbjct: 464 WYFVE 468
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 6 WYFVK 10
WYFV+
Sbjct: 464 WYFVE 468
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 6 WYFVK 10
WYFV+
Sbjct: 464 WYFVE 468
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 6 WYFVK 10
WYFV+
Sbjct: 464 WYFVE 468
>sp|UL79_HCMVM|PROTEIN UL79|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VVAQLWYF 8
+ ++WYF
Sbjct: 195 ICQKMWYF 202
>sp|UL79_HCMVA|PROTEIN UL79|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VVAQLWYF 8
+ ++WYF
Sbjct: 195 ICQKMWYF 202
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 6 WYFVK 10
WYFV+
Sbjct: 464 WYFVE 468
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 VVAQLW 6
VVA+LW
Sbjct: 47 VVAKLW 52
>sp|PG038_MONPV|EARLY protein OPG038|Monkeypox virus (MPXV)
Query: 6 WYFV 9
WYFV
Sbjct: 34 WYFV 37
>sp|TRM1_HHV7J|TRIPARTITE terminase subunit 1|Human herpesvirus 7 (strain JI)
Query: 4 QLWYFVK 10
Q+W F++
Sbjct: 610 QMWNFIR 616
>sp|CAPSD_TTVV6|CAPSID protein|Torque teno virus (isolate Human/China/CT23F/2001)
Query: 6 WYFVK 10
WYF K
Sbjct: 229 WYFTK 233
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 LWYFV 9
LW+F+
Sbjct: 770 LWFFI 774
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 LWYFV 9
LW+F+
Sbjct: 770 LWFFI 774
414|Sequence|2066|2075|WYFVKCIYFA
>sp|M2_I88A7|MATRIX protein 2|Influenza A virus (strain A/Wisconsin/3523/1988
Query: 3 FVKCIY 8
F+KCIY
Sbjct: 47 FLKCIY 52
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 YFVKCI 7
Y+VKC+
Sbjct: 804 YYVKCV 809
>sp|CAPSD_HBVC0|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ V C+ F
Sbjct: 102 WFHVSCLTFG 111
>sp|CAPSD_HBVC7|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|PG189_VACCC|ANKYRIN repeat protein OPG189|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 WYFVKC 6
WY +KC
Sbjct: 447 WYILKC 452
>sp|XCORE_HBVC4|PUTATIVE X-Core fused protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 278 WFHISCLTFG 287
>sp|CAPSD_HBVH3|CAPSID protein|Hepatitis B virus genotype H
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVG1|CAPSID protein|Hepatitis B virus genotype G
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 114 WFHISCLTFG 123
>sp|CAPSD_HBVD2|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVG3|CAPSID protein|Hepatitis B virus genotype G
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 114 WFHISCLTFG 123
>sp|CAPSD_HBVG2|CAPSID protein|Hepatitis B virus genotype G
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 114 WFHISCLTFG 123
>sp|CAPSD_HBVF1|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVA3|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVC1|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVB3|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVA6|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|PG189_VARV|ANKYRIN repeat protein OPG189|Variola virus
Query: 1 WYFVKC 6
WY +KC
Sbjct: 447 WYILKC 452
>sp|PG189_VAR67|ANKYRIN repeat protein OPG189|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 WYFVKC 6
WY +KC
Sbjct: 447 WYILKC 452
>sp|CAPSD_HBVA8|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVA2|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVA5|CAPSID protein|Hepatitis B virus genotype A1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVB4|CAPSID protein|Hepatitis B virus genotype B/C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVCJ|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVC8|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVC5|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVC4|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVC3|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVB8|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 WYFVKCIYF 9
W+ + C+ F
Sbjct: 102 WFHISCLTF 110
>sp|CAPSD_HBVB7|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVB6|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVB2|CAPSID protein|Hepatitis B virus genotype B2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVA7|CAPSID protein|Hepatitis B virus genotype A2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVF6|CAPSID protein|Hepatitis B virus genotype F2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|PG189_MONPV|ANKYRIN repeat protein OPG189|Monkeypox virus (MPXV)
Query: 1 WYFVKC 6
WY +KC
Sbjct: 450 WYILKC 455
>sp|CAPSD_HBVC2|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVC9|CAPSID protein|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVD4|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVD1|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVA9|CAPSID protein|Hepatitis B virus genotype A3
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ V C+ F
Sbjct: 131 WFHVSCLTFG 140
>sp|CAPSD_HBVD6|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVD3|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|CAPSD_HBVD7|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVD5|CAPSID protein|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|CAPSD_HBVB1|CAPSID protein|Hepatitis B virus genotype B1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 102 WFHISCLTFG 111
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 3 FVKCIYF 9
F K IYF
Sbjct: 249 FTKVIYF 255
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 3 FVKCIYF 9
F K IYF
Sbjct: 249 FTKVIYF 255
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 2 YFVKCIYFA 10
Y C+Y A
Sbjct: 84 YLQNCVYLA 92
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVH3|EXTERNAL core antigen|Hepatitis B virus genotype H
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVF1|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|VE7_HPV58|PROTEIN E7|Human papillomavirus 58
Query: 1 WYFVKCIY 8
+Y V C Y
Sbjct: 53 YYIVTCCY 60
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVA5|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVA9|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|Z_MACHU|RING finger protein Z|Machupo virus (MACV)
Query: 2 YFVKCIYFA 10
Y KC +FA
Sbjct: 37 YNCKCCWFA 45
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|ENV_FOAMV|ENVELOPE glycoprotein gp130|Human spumaretrovirus (SFVcpz(hu)) (Human
Query: 1 WYFVKCI 7
W F+ CI
Sbjct: 71 WMFLVCI 77
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 1 WYFVKCIYFA 10
W+ + C+ F
Sbjct: 131 WFHISCLTFG 140
>sp|Z_JUNIN|RING finger protein Z|Junin mammarenavirus (JUNV) (Junn
Query: 2 YFVKCIYFA 10
Y KC +FA
Sbjct: 37 YNCKCCWFA 45
415|Sequence|2071|2080|CIYFALSAYQ
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 CIYFALSAYQ 10
C Y A A+Q
Sbjct: 387 CAYVAFRAWQ 396
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 1 CIYFALSAY 9
C ++A++AY
Sbjct: 664 CTFWAVNAY 672
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 1 CIYFALS 7
C+Y ALS
Sbjct: 1164 CLYVALS 1170
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 2 IYFALSAY 9
+YF SAY
Sbjct: 648 VYFEESAY 655
416|Sequence|2076|2085|LSAYQIRCGY
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 LSAYQIRC 8
L+AY I+C
Sbjct: 1645 LNAYNIKC 1652
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 3 AYQIRC 8
AY IRC
Sbjct: 288 AYSIRC 293
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 3 AYQIRC 8
AY IRC
Sbjct: 288 AYSIRC 293
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 3 AYQIRC 8
AY IRC
Sbjct: 288 AYSIRC 293
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 AYQIRC 8
AY IRC
Sbjct: 284 AYSIRC 289
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|VE1_HPV63|REPLICATION protein E1|Human papillomavirus type 63
Query: 2 SAYQIRCGY 10
+ +Q++C Y
Sbjct: 221 TVFQVQCNY 229
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YQIRCGY 10
Y+I+C Y
Sbjct: 277 YEIKCRY 283
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YQIRCGY 10
Y+I+C Y
Sbjct: 277 YEIKCRY 283
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 4 YQIRCG 9
YQ+ CG
Sbjct: 979 YQVSCG 984
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 190 SAYQVR 195
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 190 SAYQVR 195
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 190 SAYQVR 195
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 190 SAYQVR 195
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 YQIRC 8
YQ+RC
Sbjct: 149 YQLRC 153
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 YQIRC 8
YQ+RC
Sbjct: 149 YQLRC 153
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 YQIRC 8
YQ+RC
Sbjct: 149 YQLRC 153
>sp|PG056_VACCP|PROTEIN OPG056|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 LSAYQIRCG 9
+ AY+ CG
Sbjct: 321 MDAYKFSCG 329
>sp|POLG_HCVTH|GENOME polyprotein|Hepatitis C virus (isolate TH)
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 74 SAYQVR 79
>sp|POLG_HCVH7|GENOME polyprotein|Hepatitis C virus (isolate HCT27)
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 62 SAYQVR 67
>sp|PG056_VACCC|PROTEIN OPG056|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSAYQIRCG 9
+ AY+ CG
Sbjct: 321 MDAYKFSCG 329
>sp|PG056_VACCA|PROTEIN OPG056|Vaccinia virus (strain Ankara) (VACV)
Query: 1 LSAYQIRCG 9
+ AY+ CG
Sbjct: 321 MDAYKFSCG 329
>sp|PG056_VAR67|PROTEIN OPG056|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LSAYQIRCG 9
+ AY+ CG
Sbjct: 321 MDAYKFSCG 329
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 190 SAYQVR 195
>sp|POLG_HCVE1|GENOME polyprotein|Hepatitis C virus (isolate EC1)
Query: 2 SAYQIR 7
SAYQ+R
Sbjct: 74 SAYQVR 79
417|Sequence|2081|2090|IRCGYPTRIL
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 1 IRCGYPTR 8
+RC YPTR
Sbjct: 221 MRCSYPTR 228
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 1 IRCGYPTR 8
+RC YPTR
Sbjct: 221 MRCSYPTR 228
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 1 IRCGYPTR 8
+RC YPTR
Sbjct: 221 MRCSYPTR 228
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IRCGYPTR 8
+RC YPTR
Sbjct: 221 MRCSYPTR 228
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IRCGYPTR 8
+RC YPTR
Sbjct: 221 MRCSYPTR 228
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 1 IRCGYPTR 8
+RC YPTR
Sbjct: 221 MRCSYPTR 228
>sp|ORF45_HHV8P|PROTEIN ORF45|Human herpesvirus 8 type P
Query: 2 RCGYPTRIL 10
RC PTRIL
Sbjct: 381 RCSDPTRIL 389
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 3 CGYPTRIL 10
CGY R+L
Sbjct: 76 CGYSDRVL 83
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 3 CGYPTRIL 10
CGY R+L
Sbjct: 76 CGYSDRVL 83
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 3 CGYPTRIL 10
CGY R+L
Sbjct: 76 CGYSDRVL 83
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 3 CGYPTRIL 10
CGY R+L
Sbjct: 76 CGYSDRVL 83
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 3 CGYPTRIL 10
CGY R+L
Sbjct: 76 CGYSDRVL 83
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 3 CGYPTRIL 10
CGY RI+
Sbjct: 76 CGYSDRIM 83
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 3 CGYPTRIL 10
CGY RI+
Sbjct: 76 CGYSDRII 83
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 CGYPTRIL 10
CGY RI+
Sbjct: 76 CGYSDRII 83
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 3 CGYPTRIL 10
CGY RI+
Sbjct: 76 CGYSDRII 83
Query: 1 IRCGYPTRIL 10
I C Y TR++
Sbjct: 518 ITCWYQTRLV 527
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 3 CGYPTRIL 10
CGYP +L
Sbjct: 181 CGYPGPVL 188
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 IRCGYPT 7
++CG PT
Sbjct: 520 LKCGLPT 526
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 IRCGYPT 7
++CG PT
Sbjct: 520 LKCGLPT 526
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 IRCGYPT 7
++CG PT
Sbjct: 520 LKCGLPT 526
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 IRCGYPTRIL 10
I C Y TRI+
Sbjct: 529 ITCFYQTRIV 538
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 IRCGYPTRIL 10
I C Y TRI+
Sbjct: 530 ITCFYQTRIV 539
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 IRCGYPTRI 9
+RC PT++
Sbjct: 1405 VRCKTPTQL 1413
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 2 RCGYP 6
+CGYP
Sbjct: 647 QCGYP 651
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 2 RCGYP 6
+CGYP
Sbjct: 647 QCGYP 651
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 2 RCGYP 6
+CGYP
Sbjct: 647 QCGYP 651
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 2 RCGYP 6
+CGYP
Sbjct: 647 QCGYP 651
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 RCGYP 6
+CGYP
Sbjct: 650 QCGYP 654
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 2 RCGYP 6
+CGYP
Sbjct: 647 QCGYP 651
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 2 RCGYP 6
+CGYP
Sbjct: 647 QCGYP 651
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 2 RCGYP 6
+CGYP
Sbjct: 637 QCGYP 641
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 643 QCGYP 647
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 RCGYP 6
+CGYP
Sbjct: 643 QCGYP 647
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 RCGYP 6
+CGYP
Sbjct: 650 QCGYP 654
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 RCGYP 6
+CGYP
Sbjct: 643 QCGYP 647
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 RCGYP 6
+CGYP
Sbjct: 650 QCGYP 654
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 RCGYP 6
+CGYP
Sbjct: 650 QCGYP 654
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 RCGYP 6
+CGYP
Sbjct: 650 QCGYP 654
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 2 RCGYP 6
+CGYP
Sbjct: 650 QCGYP 654
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 CGYPTR 8
CG+P++
Sbjct: 534 CGFPSQ 539
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 2 RCGYP 6
+CGYP
Sbjct: 648 QCGYP 652
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 CGYPTR 8
CG+P++
Sbjct: 534 CGFPSQ 539
>sp|VIF_HV190|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 RCGYP 6
RC YP
Sbjct: 132 RCNYP 136
>sp|VME1_MERS1|MEMBRANE protein|Middle East respiratory syndrome-related coronavirus
Query: 1 IRCGYPTR 8
++ GYP+R
Sbjct: 34 LQYGYPSR 41
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 RCGYPTRI 9
RC PTR+
Sbjct: 318 RCTDPTRL 325
>sp|VIF_HV1YB|VIRION infectivity factor|Human immunodeficiency virus type 1
Query: 2 RCGYP 6
RC YP
Sbjct: 132 RCXYP 136
418|Sequence|2086|2095|PTRILGNFLT
>sp|VE6_HPV25|PROTEIN E6|Human papillomavirus 25
Query: 1 PTRILGNFLT 10
P GNFLT
Sbjct: 44 PCNFCGNFLT 53
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 1 PTRILGNFLT 10
P GNFLT
Sbjct: 54 PCNFCGNFLT 63
>sp|VE6_HPV20|PROTEIN E6|Human papillomavirus 20
Query: 1 PTRILGNFLT 10
P GNFLT
Sbjct: 51 PCNFCGNFLT 60
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 1 PTRILGNFLT 10
P GNFLT
Sbjct: 57 PCNFCGNFLT 66
>sp|NTP1_VACCC|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 PTRILGNFLT 10
PTR + NFL+
Sbjct: 160 PTRSVYNFLS 169
>sp|NTP1_VACCA|NUCLEOSIDE triphosphatase I|Vaccinia virus (strain Ankara) (VACV)
Query: 1 PTRILGNFLT 10
PTR + NFL+
Sbjct: 160 PTRSVYNFLS 169
>sp|NTP1_MONPV|NUCLEOSIDE triphosphatase I|Monkeypox virus (MPXV)
Query: 1 PTRILGNFLT 10
PTR + NFL+
Sbjct: 160 PTRSVYNFLS 169
>sp|NTP1_VARV|NUCLEOSIDE triphosphatase I|Variola virus
Query: 1 PTRILGNFLT 10
PTR + NFL+
Sbjct: 160 PTRSVYNFLS 169
>sp|NTP1_VAR67|NUCLEOSIDE triphosphatase I|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 PTRILGNFLT 10
PTR + NFL+
Sbjct: 160 PTRSVYNFLS 169
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 RILGNFLT 10
R+LGN LT
Sbjct: 420 RLLGNILT 427
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 PTRILG 6
P+RILG
Sbjct: 5199 PSRILG 5204
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 PTRILG 6
P+RILG
Sbjct: 5237 PSRILG 5242
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 PTRILG 6
P+RILG
Sbjct: 5257 PSRILG 5262
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 PTRILG 6
P+RILG
Sbjct: 5287 PSRILG 5292
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PTRILG 6
P+RILG
Sbjct: 5203 PSRILG 5208
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 4 ILGNFLT 10
ILGNF T
Sbjct: 505 ILGNFAT 511
>sp|REV_HV1ET|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 RILGNFL 9
RIL NFL
Sbjct: 58 RILSNFL 64
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 PTRILG 6
P+RILG
Sbjct: 5226 PSRILG 5231
>sp|FUS_NIPAV|FUSION glycoprotein F0|Nipah virus
Query: 1 PTRILGNFL 9
PT +LGN +
Sbjct: 418 PTAVLGNVI 426
>sp|REV_HV1B9|PROTEIN Rev|Human immunodeficiency virus type 1
Query: 3 RILGNFL 9
RILG FL
Sbjct: 58 RILGTFL 64
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 TRILGNFL 9
T I+GNFL
Sbjct: 363 TPIIGNFL 370
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 TRILGNFL 9
T I+GNFL
Sbjct: 363 TPIIGNFL 370
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 TRILGNFL 9
T I+GNFL
Sbjct: 363 TPIIGNFL 370
>sp|VPAP_HCMVM|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 2 TRILGNFL 9
T +LGNF+
Sbjct: 84 TPLLGNFM 91
>sp|VPAP_HCMVA|DNA polymerase processivity factor|Human cytomegalovirus (strain
Query: 2 TRILGNFL 9
T +LGNF+
Sbjct: 84 TPLLGNFM 91
419|Sequence|2091|2100|GNFLTKKYNH
>sp|NSP1_ROTHL|NON-STRUCTURAL protein 1|Rotavirus A (strain
Query: 3 FLTKKYNH 10
+LT++YNH
Sbjct: 129 YLTQRYNH 136
>sp|J1I_HCMVA|UNCHARACTERIZED protein HKRFX|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 GNFLTKKYNH 10
GNFL NH
Sbjct: 225 GNFLFSPGNH 234
>sp|TRM2_HHV6U|TRIPARTITE terminase subunit 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 NFLTKKYNH 10
NFL+ Y H
Sbjct: 49 NFLSVGYRH 57
>sp|TRM2_HHV6Z|TRIPARTITE terminase subunit 2|Human herpesvirus 6B (strain Z29)
Query: 2 NFLTKKYNH 10
NFL+ Y H
Sbjct: 49 NFLSVGYRH 57
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 3 FLTKKY 8
FLTK+Y
Sbjct: 676 FLTKQY 681
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 2 NFLTKKY 8
NF+ +KY
Sbjct: 274 NFVARKY 280
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 GNFLTKKY 8
G FLT KY
Sbjct: 267 GFFLTLKY 274
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 45 NFLTEK 50
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|ORF24_HHV8P|PROTEIN ORF24|Human herpesvirus 8 type P
Query: 2 NFLTKKYN 9
NF+ +KY+
Sbjct: 455 NFVIRKYS 462
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 73 NFLTEK 78
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 53 NFLTEK 58
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 73 NFLTEK 78
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 73 NFLTEK 78
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 73 NFLTEK 78
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 2 NFLTKK 7
NFLT+K
Sbjct: 73 NFLTEK 78
420|Sequence|2096|2105|KKYNHLNLFL
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 YNHLNLFL 10
Y HLN+F
Sbjct: 663 YTHLNVFF 670
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 YNHLNLFL 10
Y+HL LFL
Sbjct: 21 YSHLQLFL 28
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 KKYNHLNL 8
K+Y HLN+
Sbjct: 802 KEYVHLNI 809
>sp|PG193_MONPV|SOLUBLE interferon gamma receptor OPG193|Monkeypox virus (MPXV)
Query: 4 NHLNLFL 10
+H+NLF+
Sbjct: 114 DHINLFI 120
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 4 NHLNLFL 10
NHL +FL
Sbjct: 2246 NHLAIFL 2252
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 YNHLNLFL 10
Y HL LF+
Sbjct: 21 YTHLQLFV 28
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 3 YNHLNLFL 10
Y HL LF+
Sbjct: 21 YTHLQLFV 28
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 4 NHLNLFL 10
NHL +FL
Sbjct: 2247 NHLAVFL 2253
>sp|VE4_HPV6B|PROTEIN E4|Human papillomavirus type 6b
Query: 1 KKYNHLNLF 9
KKY LNL
Sbjct: 9 KKYPFLNLL 17
>sp|VP7_ROTHD|OUTER capsid glycoprotein VP7|Rotavirus A (strain RVA/Human/United
Query: 1 KKYNHLNLF 9
K YN +N F
Sbjct: 119 KDYNDINTF 127
>sp|VP7_ROTHH|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 KKYNHLNLF 9
K YN +N F
Sbjct: 119 KDYNDINTF 127
>sp|VP7_ROTHA|OUTER capsid glycoprotein VP7|Rotavirus A (isolate
Query: 1 KKYNHLNLF 9
K YN +N F
Sbjct: 119 KDYNDINTF 127
>sp|VGP_MABVR|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ravn-87)
Query: 3 YNHLNL 8
Y H+NL
Sbjct: 186 YRHMNL 191
>sp|VGP_MABVP|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Popp-67)
Query: 3 YNHLNL 8
Y H+NL
Sbjct: 186 YRHMNL 191
>sp|VGP_MABVO|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 3 YNHLNL 8
Y H+NL
Sbjct: 186 YRHMNL 191
>sp|VGP_MABVM|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 YNHLNL 8
Y H+NL
Sbjct: 186 YRHMNL 191
>sp|VGP_MABVA|ENVELOPE glycoprotein|Lake Victoria marburgvirus (strain Angola/2005)
Query: 3 YNHLNL 8
Y H+NL
Sbjct: 186 YRHMNL 191
>sp|VE4_HPV6A|PROTEIN E4|Human papillomavirus type 6a
Query: 1 KKYNHLNLF 9
KKY LNL
Sbjct: 9 KKYPFLNLL 17
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 2 KYNHLNLF 9
+YNHL ++
Sbjct: 15 QYNHLRIY 22
421|Sequence|2101|2110|LNLFLFQGFR
>sp|NCAP_UUKS|NUCLEOPROTEIN virus (strain S23) (UUKV)
Query: 1 LNLFLFQGF 9
+NLF +QGF
Sbjct: 28 INLFQYQGF 36
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 2 NLFLFQGFR 10
N F F GFR
Sbjct: 127 NRFYFYGFR 135
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 2 NLFLFQGFR 10
N F F GFR
Sbjct: 127 NRFYFYGFR 135
>sp|NSS_BUNL7|NON-STRUCTURAL protein NS-S|Bunyavirus La Crosse (isolate Aedes
Query: 1 LNLFLFQGF 9
+NL L QG
Sbjct: 9 INLILMQGI 17
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 2 NLFLFQGF 9
N+FL GF
Sbjct: 261 NIFLASGF 268
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 2 NLFLFQGF 9
N+FL GF
Sbjct: 261 NIFLASGF 268
422|Sequence|2106|2115|FQGFRLVPFL
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 QGFRLVP 8
QGF L+P
Sbjct: 2019 QGFSLIP 2025
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 QGFRLVP 8
QGF L+P
Sbjct: 2019 QGFSLIP 2025
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 QGFRLVP 8
QGF L+P
Sbjct: 2019 QGFSLIP 2025
>sp|AN_HCMVM|ALKALINE nuclease|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 QGFRLVPF 9
+GFR +PF
Sbjct: 40 EGFRNLPF 47
>sp|AN_HCMVA|ALKALINE nuclease|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 QGFRLVPF 9
+GFR +PF
Sbjct: 40 EGFRNLPF 47
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 FQGFRLVPFL 10
+ G++ PFL
Sbjct: 1451 YSGYKETPFL 1460
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 1 FQGFRLVP 8
FQ RLVP
Sbjct: 227 FQASRLVP 234
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 FQGFRLVPF 9
+ G+R PF
Sbjct: 1448 YSGYRETPF 1456
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 FQGFRLVPFL 10
+QG +PF+
Sbjct: 414 YQGQEFLPFM 423
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 FQGFRLVPFL 10
+ GF PFL
Sbjct: 1447 YSGFGETPFL 1456
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 4 FRLVPFL 10
F+L PFL
Sbjct: 375 FKLYPFL 381
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 FRLVPFL 10
F+L PFL
Sbjct: 315 FKLYPFL 321
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 3 GFRLVP 8
GF LVP
Sbjct: 180 GFELVP 185
423|Sequence|2111|2120|LVPFLVELRA
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 1 LVPFLVELR 9
VPFL+ L+
Sbjct: 451 FVPFLIALK 459
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 VPFLVELRA 10
P LV+LRA
Sbjct: 1894 APLLVDLRA 1902
424|Sequence|2116|2125|VELRAVMDWV
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LRAVMDWV 10
LRA+ DWV
Sbjct: 1978 LRAIWDWV 1985
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 LRAVMDWV 10
LRA+ DWV
Sbjct: 1978 LRAIWDWV 1985
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 VELRAVMDWV 10
+EL+ + DWV
Sbjct: 256 LELQMMQDWV 265
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 VELRAVMDWV 10
+EL+ + DWV
Sbjct: 256 LELQMMQDWV 265
>sp|PA_I47A0|POLYMERASE acidic protein|Influenza A virus (strain A/Fort
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSISSWI 407
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2884 MRAVNDWI 2891
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2888 MRAVNDWI 2895
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2888 MRAVNDWI 2895
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2886 MRAVNDWI 2893
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2886 MRAVNDWI 2893
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2886 MRAVNDWI 2893
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I97A0|POLYMERASE acidic protein|Influenza A virus (strain A/Chicken/Hong
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I33A0|POLYMERASE acidic protein|Influenza A virus (strain A/Wilson-Smith/1933
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I97A1|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|PA_I18A0|POLYMERASE acidic protein|Influenza A virus (strain A/Brevig
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLASWI 407
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2887 MRAVSDWL 2894
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 ELRAVMDWV 10
ELR++ W+
Sbjct: 399 ELRSLSSWI 407
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2886 MRAVNDWL 2893
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 RAVMDWV 10
RAV DW+
Sbjct: 2887 RAVNDWI 2893
>sp|RIR2_HHV1K|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain KOS)
Query: 3 LRAVMDWV 10
+RA +DW+
Sbjct: 159 IRAKVDWL 166
>sp|RIR2_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Human herpesvirus 1 (strain 17)
Query: 3 LRAVMDWV 10
+RA +DW+
Sbjct: 159 IRAKVDWL 166
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 3 LRAVMDWV 10
+RAV DW+
Sbjct: 2886 MRAVNDWM 2893
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 VELRAVMDWV 10
V+LR + W+
Sbjct: 667 VQLRRLQPWI 676
>sp|PA_I96A3|POLYMERASE acidic protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 2 ELRAVMDWV 10
ELR+ W+
Sbjct: 399 ELRSFSSWI 407
>sp|PA_I00A1|POLYMERASE acidic protein|Influenza A virus (strain A/New
Query: 2 ELRAVMDWV 10
ELR+ W+
Sbjct: 399 ELRSFSSWI 407
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 ELRAVMDWV 10
ELR+ W+
Sbjct: 399 ELRSFSSWI 407
425|Sequence|2121|2130|VMDWVWTDTT
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2050 LSWSWSDDT 2058
Query: 3 DWVW 6
DW+W
Sbjct: 1525 DWLW 1528
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 4 WVWTDT 9
W W DT
Sbjct: 330 WTWKDT 335
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2049 LSWSWSDDT 2057
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2049 LSWSWSDDT 2057
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2049 LSWSWSDDT 2057
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2049 LSWSWSDDT 2057
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2050 LSWSWSDDT 2058
Query: 3 DWVW 6
DW+W
Sbjct: 1525 DWLW 1528
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 MDWVWTDTT 10
+ W W+D T
Sbjct: 2049 LSWSWSDDT 2057
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|CVC1_HHV2H|CAPSID vertex component 1|Human herpesvirus 2 (strain HG52)
Query: 3 DWVWT 7
DW+W+
Sbjct: 372 DWLWS 376
>sp|CVC1_HHV11|CAPSID vertex component 1|Human herpesvirus 1 (strain 17)
Query: 3 DWVWT 7
DW+W+
Sbjct: 375 DWLWS 379
>sp|PG130_MONPV|39KDA core protein OPG130|Monkeypox virus (MPXV)
Query: 1 VMDWVWTDT 9
+ DW+ TDT
Sbjct: 116 LFDWLSTDT 124
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 3 DWVWTDTT 10
DWV +TT
Sbjct: 386 DWVIYNTT 393
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
Query: 2 MDWVWTDTT 10
+ W W++ T
Sbjct: 2049 LSWSWSNDT 2057
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 2 MDWVWTD 8
+DW W D
Sbjct: 437 VDWSWPD 443
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
Query: 2 MDWVWTDTT 10
+ W W++ T
Sbjct: 2049 LSWSWSNDT 2057
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 3 DWVW 6
DW+W
Sbjct: 1524 DWLW 1527
Query: 2 MDWVWTDTT 10
+ W W++ T
Sbjct: 2049 LSWSWSNDT 2057
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 VMDWV 5
+MDWV
Sbjct: 1661 LMDWV 1665
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 VMDWV 5
+MDWV
Sbjct: 1661 LMDWV 1665
>sp|VE6_HPV31|PROTEIN E6|Human papillomavirus 31
Query: 1 VMDWVWTDTT 10
V+D+ +TD T
Sbjct: 42 VLDFAFTDLT 51
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 2 MDWVWT 7
MD+ WT
Sbjct: 242 MDFFWT 247
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 2 MDWVWTD 8
+DW W D
Sbjct: 453 VDWSWPD 459
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 2 MDWVWTD 8
+DW W D
Sbjct: 453 VDWSWPD 459
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 2 MDWVWTD 8
+DW W D
Sbjct: 438 VDWSWPD 444
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 2 MDWVWTD 8
+DW W D
Sbjct: 453 VDWSWPD 459
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 VMDWVWTD 8
V W+W++
Sbjct: 154 VTSWLWSE 161
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 2 MDWVWTD 8
+DW W D
Sbjct: 453 VDWSWPD 459
426|Sequence|2126|2135|WTDTTLSLSS
>sp|NCAP_LYCVA|NUCLEOPROTEIN choriomeningitis virus (strain Armstrong)
Query: 1 WTDTTLSLSS 10
W +TT+ L+S
Sbjct: 327 WENTTIDLTS 336
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 3 DTTLSLSS 10
D+TL+LSS
Sbjct: 238 DSTLALSS 245
>sp|NCAP_LYCVW|NUCLEOPROTEIN choriomeningitis virus (strain WE)
Query: 1 WTDTTLSLSS 10
W +TT+ L++
Sbjct: 327 WENTTIDLTN 336
427|Sequence|2131|2140|LSLSSWMCVE
>sp|VE1_HPV42|REPLICATION protein E1|Human papillomavirus 42
Query: 1 LSLSSWMCVE 10
L S W CVE
Sbjct: 11 LGCSGWFCVE 20
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 541 LSLWMC 546
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 3 LSSWMC 8
LS WMC
Sbjct: 551 LSLWMC 556
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 541 LSLWMC 546
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSLSSWMCV 9
L+L W CV
Sbjct: 1138 LTLCDWQCV 1146
>sp|HEMA_I59A0|HEMAGGLUTININ A virus (strain A/Chicken/Scotland/1959
Query: 3 LSSWMC 8
LS WMC
Sbjct: 548 LSFWMC 553
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 541 LSLWMC 546
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 LSSWMCVE 10
L+ W C+E
Sbjct: 366 LAEWACLE 373
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 3 LSSWMC 8
LS WMC
Sbjct: 541 LSLWMC 546
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|HEMA_I02A6|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 544 LSLWMC 549
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 3 LSSWMC 8
LS WMC
Sbjct: 552 LSLWMC 557
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LSLSSWMCV 9
L+L W CV
Sbjct: 1138 LTLCDWQCV 1146
>sp|PG083_VACCC|CORE protease OPG082|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LSSWMCV 9
LS W CV
Sbjct: 239 LSHWKCV 245
>sp|PG083_VARV|CORE protease OPG082|Variola virus
Query: 3 LSSWMCV 9
LS W CV
Sbjct: 239 LSHWKCV 245
>sp|PG083_VAR67|CORE protease OPG082|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LSSWMCV 9
LS W CV
Sbjct: 239 LSHWKCV 245
>sp|HEMA_I88A6|HEMAGGLUTININ A virus (strain A/Swine/Indiana/1726/1988
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I76AI|HEMAGGLUTININ A virus (strain A/Swine/New
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I67A2|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I61A1|HEMAGGLUTININ A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I30A0|HEMAGGLUTININ A virus (strain A/Swine/Iowa/15/1930
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I07A0|HEMAGGLUTININ A virus (strain A/USA:Texas/UR06-0195/2007
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I06A0|HEMAGGLUTININ A virus (strain A/Russia:St.Petersburg/8/2006
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I00A1|HEMAGGLUTININ A virus (strain A/New
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I96A2|HEMAGGLUTININ A virus (strain A/USA:Memphis/10/1996
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I85A4|HEMAGGLUTININ A virus (strain A/Swine/Netherlands/12/1985
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I83A1|HEMAGGLUTININ A virus (strain A/Chile/1/1983
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I18A0|HEMAGGLUTININ A virus (strain A/Brevig
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I81A3|HEMAGGLUTININ A virus (strain A/Turkey/Minnesota/1661/1981
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I80AA|HEMAGGLUTININ A virus (strain A/India/6263/1980
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 LSSWMC 8
+S WMC
Sbjct: 546 ISFWMC 551
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I96A3|HEMAGGLUTININ A virus (strain A/China:Nanchang/11/1996
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 548 AISFWMC 554
>sp|HEMA_I76A4|HEMAGGLUTININ A virus (strain A/Duck/Alberta/35/1976
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AISFWMC 555
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 LSSWMC 8
+S WMC
Sbjct: 546 ISFWMC 551
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 3 LSSWMC 8
+S WMC
Sbjct: 546 ISFWMC 551
>sp|PA_I67A0|POLYMERASE acidic protein|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I57A0|POLYMERASE acidic protein|Influenza A virus (strain A/Japan/305/1957
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I77AA|POLYMERASE acidic protein|Influenza A virus (strain A/Brazil/11/1978
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I68A6|POLYMERASE acidic protein|Influenza A virus (strain A/Northern
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I68A5|POLYMERASE acidic protein|Influenza A virus (strain A/Korea/426/1968
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I68A4|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I96A2|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I83A1|POLYMERASE acidic protein|Influenza A virus (strain A/Chile/1/1983
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I80AA|POLYMERASE acidic protein|Influenza A virus (strain A/India/6263/1980
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I71A1|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/1/1971
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I60A0|POLYMERASE acidic protein|Influenza A virus (strain A/Ann
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I57A3|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I57A2|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I45A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I40A0|POLYMERASE acidic protein|Influenza A virus (strain A/Hickox/1940
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I77AB|POLYMERASE acidic protein|Influenza A virus (strain A/USSR/90/1977
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I57A5|POLYMERASE acidic protein|Influenza A virus (strain A/Singapore/1/1957
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I54A2|POLYMERASE acidic protein|Influenza A virus (strain A/Malaysia:Malaya/302/1954
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I51A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I77A4|POLYMERASE acidic protein|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I73A5|POLYMERASE acidic protein|Influenza A virus (strain A/Port
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I72A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/101/1972
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I72A3|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/102/1972
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I72A2|POLYMERASE acidic protein|Influenza A virus (strain A/Udorn/307/1972
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I70A0|POLYMERASE acidic protein|Influenza A virus (strain A/Qu/7/1970
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I69A0|POLYMERASE acidic protein|Influenza A virus (strain A/England/878/1969
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I57A1|POLYMERASE acidic protein|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I43A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 5 SWMCVE 10
SWMC++
Sbjct: 1882 SWMCLK 1887
>sp|UL24_EBVB9|PROTEIN UL24 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 LSLSSW 6
LSL SW
Sbjct: 41 LSLKSW 46
>sp|PA_I78A8|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/18/1978
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I78A7|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/2/1978
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I76A6|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/110/1976
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I75A3|POLYMERASE acidic protein|Influenza A virus (strain A/Victoria/3/1975
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I75A0|POLYMERASE acidic protein|Influenza A virus (strain A/Beijing/39/1975
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|HEMA_I80A1|HEMAGGLUTININ A virus (strain A/Duck/Australia/749/1980
Query: 2 SLSSWMC 8
++S WMC
Sbjct: 549 AVSFWMC 555
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 3 LSSWMC 8
+S WMC
Sbjct: 546 ISFWMC 551
>sp|PA_I83A8|POLYMERASE acidic protein|Influenza A virus (strain A/Hong
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I80A4|POLYMERASE acidic protein|Influenza A virus (strain A/Memphis/4/1980
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 2 SLSSWM 7
SLSSW+
Sbjct: 402 SLSSWI 407
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LSLSSWMCVE 10
LSL +CVE
Sbjct: 715 LSLCEKVCVE 724
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LSLSSWMCVE 10
LSL +CVE
Sbjct: 715 LSLCEKVCVE 724
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 1 LSLSSWMCVE 10
LSL +CVE
Sbjct: 715 LSLCEKVCVE 724
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 6 WMCVE 10
W+C+E
Sbjct: 93 WLCLE 97
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 SSWMCV 9
+SW+C+
Sbjct: 1900 TSWICM 1905
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 2 SLSSW 6
SLSSW
Sbjct: 907 SLSSW 911
>sp|GP_BUNLC|ENVELOPMENT polyprotein|Bunyavirus La Crosse
Query: 4 SSWMCVE 10
SSW C E
Sbjct: 1064 SSWGCEE 1070
>sp|GP_BUNL8|ENVELOPMENT polyprotein|Bunyavirus La Crosse (isolate Human/United
Query: 4 SSWMCVE 10
SSW C E
Sbjct: 1064 SSWGCEE 1070
>sp|GP_BUNSH|ENVELOPMENT polyprotein|Bunyavirus snowshoe hare
Query: 4 SSWMCVE 10
SSW C E
Sbjct: 1064 SSWGCEE 1070
428|Sequence|2136|2145|WMCVEDIYAN
>sp|BEL2_SFV3L|PROTEIN Bel-2|Simian foamy virus type 3
Query: 1 WMCVEDIYAN 10
W+C+ED N
Sbjct: 93 WLCLEDPSGN 102
>sp|POLS_CHIKN|STRUCTURAL polyprotein|Chikungunya virus (strain Nagpur) (CHIKV)
Query: 5 EDIYAN 10
ED+YAN
Sbjct: 1020 EDVYAN 1025
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMCVEDIYA 9
WM ED+ A
Sbjct: 3294 WMTTEDMLA 3302
>sp|VP8_CTFVL|UNCHARACTERIZED protein VP8|Colorado tick fever virus (strain
Query: 1 WMCVEDI 7
W C++D+
Sbjct: 411 WCCLQDV 417
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 WMCVEDIYA 9
WM ED+ A
Sbjct: 3333 WMTTEDMLA 3341
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 WMCVEDIYA 9
WM ED+ A
Sbjct: 3328 WMTTEDMLA 3336
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 MCVEDIYA 9
+C+E +Y+
Sbjct: 2047 LCIEKVYS 2054
>sp|E1BS_ADE05|E1B protein, small T-antigen|Human adenovirus C serotype 5
Query: 1 WMCVEDIYA 9
W C+ED A
Sbjct: 4 WECLEDFSA 12
>sp|E1BS_ADE02|E1B protein, small T-antigen|Human adenovirus C serotype 2
Query: 1 WMCVEDIYA 9
W C+ED A
Sbjct: 4 WECLEDFSA 12
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 WMCVEDIYAN 10
W +E +Y N
Sbjct: 186 WCTLESVYVN 195
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3326 WMTTEDM 3332
>sp|U20_HHV6Z|GLYCOPROTEIN U20|Human herpesvirus 6B (strain Z29)
Query: 3 CVEDI 7
CVEDI
Sbjct: 175 CVEDI 179
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CVEDI 7
CVEDI
Sbjct: 175 CVEDI 179
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 WMCVEDIYA 9
WM ED+ A
Sbjct: 3328 WMTSEDMLA 3336
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 MCVEDIY 8
MC+ED +
Sbjct: 282 MCLEDTW 288
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 1 WMCVEDI 7
W+ +EDI
Sbjct: 2109 WITLEDI 2115
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 1 WMCVEDI 7
W+ +EDI
Sbjct: 2109 WITLEDI 2115
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 1 WMCVEDI 7
W+ +EDI
Sbjct: 2109 WITLEDI 2115
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 WMCVEDI 7
W+ +EDI
Sbjct: 2109 WITLEDI 2115
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 WMCVEDI 7
W+ +EDI
Sbjct: 2109 WITLEDI 2115
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 1 WMCVEDI 7
W+ +EDI
Sbjct: 2109 WITLEDI 2115
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3291 WMTTEDM 3297
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3291 WMTTEDM 3297
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3291 WMTTEDM 3297
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3294 WMTTEDM 3300
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3294 WMTTEDM 3300
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3294 WMTTEDM 3300
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3291 WMTTEDM 3297
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3291 WMTTEDM 3297
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3294 WMTTEDM 3300
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3291 WMTTEDM 3297
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3294 WMTTEDM 3300
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3314 WMTTEDM 3320
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3313 WMTTEDM 3319
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3317 WMTTEDM 3323
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3313 WMTTEDM 3319
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3313 WMTTEDM 3319
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3313 WMTTEDM 3319
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3314 WMTTEDM 3320
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3313 WMTTEDM 3319
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3293 WMTTEDM 3299
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3293 WMTTEDM 3299
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3317 WMTTEDM 3323
>sp|VIRF3_HHV8P|VIRAL IRF3-like protein|Human herpesvirus 8 type P
Query: 2 MCVEDIY 8
MC ED++
Sbjct: 268 MCDEDLF 274
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 WMCVEDIYA 9
WM ED+ +
Sbjct: 3337 WMTTEDMLS 3345
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3335 WMTTEDM 3341
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WMCVEDIYA 9
WM ED+ +
Sbjct: 3295 WMTTEDMLS 3303
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WMCVEDIYA 9
WM ED+ +
Sbjct: 3295 WMTTEDMLS 3303
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3325 WMTTEDM 3331
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3325 WMTTEDM 3331
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 WMCVEDIYA 9
WM ED+ +
Sbjct: 3332 WMTTEDMLS 3340
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3335 WMTTEDM 3341
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3335 WMTTEDM 3341
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3293 WMTTEDM 3299
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3293 WMTTEDM 3299
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3293 WMTTEDM 3299
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 WMCVEDIYA 9
WM ED+ +
Sbjct: 3294 WMTTEDMLS 3302
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3315 WMTTEDM 3321
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3316 WMTTEDM 3322
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3335 WMTTEDM 3341
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3321 WMTTEDM 3327
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3336 WMTTEDM 3342
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3336 WMTTEDM 3342
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3315 WMTTEDM 3321
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3313 WMTTEDM 3319
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3315 WMTTEDM 3321
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3315 WMTTEDM 3321
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3315 WMTTEDM 3321
>sp|DNB2_ADE40|DNA-BINDING protein|Human adenovirus F serotype 40
Query: 3 CVEDI 7
CVED+
Sbjct: 285 CVEDV 289
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 WMCVEDI 7
WM ED+
Sbjct: 3306 WMTTEDM 3312
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 5 EDIYAN 10
ED++AN
Sbjct: 190 EDVFAN 195
>sp|NP04_VZVO|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 MCVEDIYAN 10
+C++ +Y N
Sbjct: 22 LCIKALYKN 30
>sp|NP04_VZVD|NUCLEAR protein UL4 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 MCVEDIYAN 10
+C++ +Y N
Sbjct: 22 LCIKALYKN 30
429|Sequence|2141|2150|DIYANIFIIK
>sp|VL2_HPV66|MINOR capsid protein L2|Human papillomavirus 66
Query: 1 DIYANI 6
DIYANI
Sbjct: 349 DIYANI 354
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 DIYANI 6
DIYANI
Sbjct: 349 DIYANI 354
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 DIYANI 6
DIYANI
Sbjct: 349 DIYANI 354
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 DIYANIFIIK 10
++YA+ F++K
Sbjct: 381 NVYADSFVVK 390
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 DIYANI 6
DIYAN+
Sbjct: 349 DIYANL 354
>sp|AN_HHV7J|ALKALINE nuclease|Human herpesvirus 7 (strain JI)
Query: 1 DIYANIFI 8
D+Y+NI++
Sbjct: 89 DLYSNIYV 96
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 1 DIYANIFIIK 10
++YA+ F+I+
Sbjct: 394 NVYADSFVIR 403
>sp|PG064_VAR67|PROTEIN OPG064|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 IYANIF 7
IYANIF
Sbjct: 270 IYANIF 275
>sp|PG064_VACCC|PROTEIN OPG064|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IYANIF 7
IYANIF
Sbjct: 270 IYANIF 275
>sp|PG064_MONPV|PROTEIN OPG064|Monkeypox virus (MPXV)
Query: 2 IYANIF 7
IYANIF
Sbjct: 270 IYANIF 275
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DIYANIF 7
DIY NI+
Sbjct: 61 DIYFNIY 67
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 DIYANIFII 9
D +NIF+I
Sbjct: 3163 DAASNIFVI 3171
>sp|D3_VARV|CORE protein D3|Variola virus
Query: 1 DIYANIFII 9
DI+ N FII
Sbjct: 102 DIHTNKFII 110
>sp|D3_VAR67|CORE protein D3|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 DIYANIFII 9
DI+ N FII
Sbjct: 102 DIHTNKFII 110
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 DIYANIFII 9
D +NIF+I
Sbjct: 3163 DAASNIFVI 3171
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DIYANIF 7
++Y+N+F
Sbjct: 279 EVYSNLF 285
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 DIYANIF 7
++Y+N+F
Sbjct: 279 EVYSNLF 285
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 DIYANIF 7
++Y+N+F
Sbjct: 280 EVYSNLF 286
430|Sequence|2146|2155|IFIIKCSRET
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 IFIIKCSR 8
IF+I C R
Sbjct: 474 IFLITCCR 481
>sp|TRX2_HHV8P|TRIPLEX capsid protein 2|Human herpesvirus 8 type P
Query: 6 CSRET 10
CSRET
Sbjct: 51 CSRET 55
>sp|NSP3_ROTHW|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 136 IIKCTR 141
>sp|NSP3_ROTHK|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 136 IIKCTR 141
>sp|NSP3_ROTAM|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 133 IIKCTR 138
>sp|NSP3_ROTHT|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 136 IIKCTR 141
>sp|NSP3_ROTHP|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 133 IIKCTR 138
>sp|NSP3_ROTWI|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 136 IIKCTR 141
>sp|NSP3_ROTAD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 133 IIKCTR 138
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 6 CSRET 10
CSRET
Sbjct: 5919 CSRET 5923
>sp|NSP3_ROT41|NON-STRUCTURAL protein 3|Rotavirus A (isolate
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 136 IIKCTR 141
>sp|NSP3_ROTH7|NON-STRUCTURAL protein 3|Rotavirus A (isolate RVA/Human/United
Query: 3 IIKCSR 8
IIKC+R
Sbjct: 133 IIKCTR 138
>sp|NSP3_ROTHL|NON-STRUCTURAL protein 3|Rotavirus A (strain
Query: 3 IIKCSR 8
+IKC+R
Sbjct: 136 VIKCTR 141
>sp|NSP3_ROTHD|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/United
Query: 3 IIKCSR 8
+IKC+R
Sbjct: 136 VIKCTR 141
>sp|NSP3_ROTHS|NON-STRUCTURAL protein 3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4])
Query: 3 IIKCSR 8
+IKC+R
Sbjct: 136 VIKCTR 141
>sp|VB18_VACCA|ANKYRIN repeat protein B18|Vaccinia virus (strain Ankara) (VACV)
Query: 3 IIKCSRET 10
I KC +ET
Sbjct: 457 ITKCHKET 464
431|Sequence|2151|2160|CSRETEKKYP
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 1 CSRETEKKYP 10
SRE + KYP
Sbjct: 87 LSRELKAKYP 96
>sp|PAP_VZVD|DNA polymerase processivity factor|Varicella-zoster virus (strain
Query: 1 CSRETEKKY 9
CS ETE+ Y
Sbjct: 64 CSLETEQLY 72
>sp|PAP_VZVO|DNA polymerase processivity factor|Varicella-zoster virus (strain Oka
Query: 1 CSRETEKKY 9
CS ETE+ Y
Sbjct: 64 CSLETEQLY 72
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 ETEKKYP 10
E+E KYP
Sbjct: 172 ESESKYP 178
>sp|HEMA_I80A4|HEMAGGLUTININ A virus (strain A/Memphis/4/1980
Query: 4 ETEKKYP 10
E+E KYP
Sbjct: 172 ESESKYP 178
>sp|HEMA_I79A0|HEMAGGLUTININ A virus (strain A/Bangkok/1/1979
Query: 4 ETEKKYP 10
E+E KYP
Sbjct: 156 ESESKYP 162
>sp|ENV_HV1V9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 ETEKKYP 10
ET++ YP
Sbjct: 2 ETQRNYP 8
>sp|ENV_HV190|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 ETEKKYP 10
ET++ YP
Sbjct: 2 ETQRNYP 8
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 CSRETEKK 8
CS+ TE+K
Sbjct: 309 CSKYTERK 316
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 ETEKKY 9
ETEK+Y
Sbjct: 451 ETEKRY 456
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 CSRETEKK 8
CS+ TE+K
Sbjct: 309 CSKYTERK 316
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SRETEKKY 9
+RET K Y
Sbjct: 3 ARETRKNY 10
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 CSRETEKK 8
CS+ TE+K
Sbjct: 309 CSKFTERK 316
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 5 TEKKYP 10
TEKK+P
Sbjct: 237 TEKKFP 242
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 CSRETEKK 8
CS+ TE+K
Sbjct: 309 CSKFTERK 316
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 CSRETEKK 8
CS+ TE+K
Sbjct: 310 CSQYTERK 317
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 CSRETEKK 8
CS+ TE+K
Sbjct: 310 CSQYTERK 317
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 4 ETEKKYP 10
E+E KYP
Sbjct: 172 ESEYKYP 178
>sp|U91_HHV6U|UNCHARACTERIZED protein U91|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CSRETEKK 8
CSR TE++
Sbjct: 117 CSRTTEEE 124
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 CSRETEKKYP 10
CSR YP
Sbjct: 889 CSRRGTAAYP 898
>sp|POLN_HEVMG|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 CSRETEKKYP 10
CSR YP
Sbjct: 890 CSRRGTAAYP 899
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 4 ETEKKYP 10
E+E KYP
Sbjct: 156 ESEYKYP 162
>sp|POLN_HEVUS|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 3
Query: 1 CSRETEKKYP 10
CSR YP
Sbjct: 890 CSRRGTAAYP 899
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 2 SRETEKKYP 10
++ETE YP
Sbjct: 233 TKETEAPYP 241
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 ETEKKYP 10
ETE YP
Sbjct: 1606 ETEDDYP 1612
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 CSRETEKKYP 10
C R KYP
Sbjct: 2278 CHRPPRFKYP 2287
432|Sequence|2156|2165|EKKYPQPKGQ
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 EKKYPQPKGQ 10
EKKYP KG+
Sbjct: 1104 EKKYPFTKGK 1113
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 EKKYPQPKGQ 10
EKKYP KG+
Sbjct: 1104 EKKYPFTKGK 1113
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 EKKYPQPKGQ 10
EKKYP KG+
Sbjct: 1104 EKKYPFTKGK 1113
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 EKKYPQPKGQ 10
E+KYP KG+
Sbjct: 1104 ERKYPFTKGK 1113
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 EKKYPQPKGQ 10
E+KYP KG+
Sbjct: 1104 ERKYPFTKGK 1113
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 2 KKYPQPKG 9
K+YP KG
Sbjct: 494 KRYPNQKG 501
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 2 KKYPQPKG 9
K+YP KG
Sbjct: 479 KRYPNEKG 486
>sp|UL119_HCMVM|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 EKKYPQP 7
EKK+P P
Sbjct: 334 EKKHPVP 340
>sp|UL119_HCMVA|VIRAL Fc-gamma receptor-like protein UL119|Human cytomegalovirus (strain
Query: 1 EKKYPQP 7
EKK+P P
Sbjct: 334 EKKHPVP 340
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 EKKYP 5
EKKYP
Sbjct: 161 EKKYP 165
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 EKKYP 5
EKKYP
Sbjct: 161 EKKYP 165
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 EKKYP 5
EKKYP
Sbjct: 161 EKKYP 165
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 EKKYP 5
EKKYP
Sbjct: 161 EKKYP 165
>sp|ENV_HV1S1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 EKKYPQPKG 9
+ ++P P+G
Sbjct: 709 QTRFPAPRG 717
>sp|DPOL_VARV|DNA polymerase|Variola virus
Query: 2 KKYPQPK 8
+KYP P+
Sbjct: 588 QKYPPPR 594
>sp|DPOL_VAR67|DNA polymerase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KKYPQPK 8
+KYP P+
Sbjct: 588 QKYPPPR 594
>sp|DPOL_MONPV|DNA polymerase|Monkeypox virus (MPXV)
Query: 2 KKYPQPK 8
+KYP P+
Sbjct: 589 QKYPPPR 595
>sp|UL16P_HCMVM|PROTEIN UL16|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 YPQPKG 9
YP+P G
Sbjct: 162 YPRPPG 167
>sp|UL16P_HCMVA|PROTEIN UL16|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 YPQPKG 9
YP+P G
Sbjct: 162 YPRPPG 167
>sp|DPOL_VACCC|DNA polymerase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KKYPQPK 8
+KYP P+
Sbjct: 589 QKYPPPR 595
>sp|DPOL_VACCA|DNA polymerase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KKYPQPK 8
+KYP P+
Sbjct: 589 QKYPPPR 595
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 EKKYPQPKGQ 10
EK+YP K +
Sbjct: 1875 EKEYPTIKSK 1884
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 KKYPQPKG 9
K P PKG
Sbjct: 13 KDNPHPKG 20
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 2 KKYPQPKG 9
K P PKG
Sbjct: 13 KDNPHPKG 20
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 KKYPQPKG 9
K P PKG
Sbjct: 13 KDNPHPKG 20
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 2 KKYPQPKG 9
K P PKG
Sbjct: 13 KDNPHPKG 20
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 2 KKYPQPKG 9
K P PKG
Sbjct: 13 KDNPHPKG 20
>sp|GE_VZVO|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Oka vaccine)
Query: 5 PQPKGQ 10
P+P+GQ
Sbjct: 164 PKPQGQ 169
>sp|GE_VZVD|ENVELOPE glycoprotein E|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 PQPKGQ 10
P+P+GQ
Sbjct: 164 PKPQGQ 169
>sp|UL27_HCMVA|PROTEIN UL27|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EKKYPQPK 8
+KK P PK
Sbjct: 89 KKKTPAPK 96
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 KYPQPKG 9
KY QP G
Sbjct: 1834 KYKQPPG 1840
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 KYPQPKG 9
KY QP G
Sbjct: 1827 KYQQPPG 1833
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 3 KYPQPKG 9
KY QP G
Sbjct: 1854 KYTQPPG 1860
433|Sequence|2161|2170|QPKGQKKKKI
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PKGQKKKK 9
PK QKK K
Sbjct: 5 PKPQKKNK 12
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 2 PKGQKKKKI 10
P G+KK K+
Sbjct: 76 PSGEKKTKL 84
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 2 PKGQKKKKI 10
P G+KK K+
Sbjct: 76 PSGEKKTKL 84
>sp|US12_HCMVM|UNCHARACTERIZED protein US12|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QPKGQKKKK 9
+P G KK+K
Sbjct: 10 EPLGHKKEK 18
>sp|US12_HCMVA|UNCHARACTERIZED protein HVLF6|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 QPKGQKKKK 9
+P G KK+K
Sbjct: 10 EPLGHKKEK 18
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QPKGQKKK 8
QP+ +KKK
Sbjct: 285 QPRVEKKK 292
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 QPKGQKKK 8
QP+ +KKK
Sbjct: 285 QPRVEKKK 292
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QPKGQKKK 8
QP+ +KKK
Sbjct: 285 QPRVEKKK 292
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 QPKGQKKK 8
QP+ +KKK
Sbjct: 285 QPRVEKKK 292
>sp|F_HCV1|F protein|Hepatitis C virus genotype 1a
Query: 2 PKGQKKK 8
PK QKKK
Sbjct: 5 PKPQKKK 11
>sp|VL1_HPV17|MAJOR capsid protein L1|Human papillomavirus 17
Query: 2 PKGQKKKK 9
PKG K+K+
Sbjct: 499 PKGIKRKR 506
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 4 GQKKKKI 10
GQ++KK+
Sbjct: 2469 GQRQKKV 2475
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 GQKKKKI 10
GQ++KK+
Sbjct: 2466 GQRQKKV 2472
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 4 GQKKKKI 10
GQ++KK+
Sbjct: 2466 GQRQKKV 2472
434|Sequence|2166|2175|KKKKIVKYGM
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 KKKIVKYG 9
KK+I KYG
Sbjct: 895 KKRIKKYG 902
>sp|VE2_HPV09|REGULATORY protein E2|Human papillomavirus 9
Query: 1 KKKKIVKY 8
KK+ +VKY
Sbjct: 400 KKRGLVKY 407
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 KKKKIVKY 8
K KKIVK+
Sbjct: 1552 KLKKIVKW 1559
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 KKKKIVKY 8
K KKIVK+
Sbjct: 1552 KLKKIVKW 1559
435|Sequence|2171|2180|VKYGMGGLII
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 VKYGMGGL 8
+KY MGG+
Sbjct: 732 IKYPMGGI 739
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 VKYGMGGL 8
+KY MGG+
Sbjct: 732 IKYPMGGI 739
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 VKYGMGGL 8
+KY MGG+
Sbjct: 732 IKYPMGGI 739
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 1 VKYGMG 6
V+YGMG
Sbjct: 86 VQYGMG 91
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 VKYGMGGL 8
+KYG GG+
Sbjct: 43 LKYGSGGV 50
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 YGMGGL 8
+GMGG+
Sbjct: 352 FGMGGM 357
>sp|NCAP_BUNLC|NUCLEOPROTEIN La Crosse
Query: 1 VKYGMGGL 8
+K+G GGL
Sbjct: 212 LKWGKGGL 219
>sp|NCAP_BUNL8|NUCLEOPROTEIN La Crosse (isolate Human/United
Query: 1 VKYGMGGL 8
+K+G GGL
Sbjct: 212 LKWGKGGL 219
>sp|NCAP_BUNSH|NUCLEOPROTEIN snowshoe hare
Query: 1 VKYGMGGL 8
+K+G GGL
Sbjct: 212 LKWGRGGL 219
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 KYGMGG 7
KYG GG
Sbjct: 147 KYGRGG 152
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 KYGMGG 7
KYG GG
Sbjct: 147 KYGRGG 152
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 3 YGMGG 7
YG+GG
Sbjct: 833 YGLGG 837
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 3 YGMGG 7
YG+GG
Sbjct: 833 YGLGG 837
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 VKYGMG 6
+KYG+G
Sbjct: 272 LKYGLG 277
436|Sequence|2176|2185|GGLIILFLIA
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 GGLIILFLIA 10
GG++IL L+A
Sbjct: 734 GGMLILVLVA 743
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 GGLIILFLIA 10
GG++IL L+A
Sbjct: 734 GGMLILVLVA 743
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 GGLIILFLIA 10
GG++IL L+A
Sbjct: 734 GGMLILVLVA 743
>sp|E321_ADE07|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 7
Query: 2 GLIILFL 8
GLII+FL
Sbjct: 159 GLIIIFL 165
>sp|VP7_CTFVL|UNCHARACTERIZED protein VP7|Colorado tick fever virus (strain
Query: 1 GGLIILF 7
GGL +LF
Sbjct: 249 GGLFVLF 255
>sp|NCAP_HANTV|NUCLEOPROTEIN virus (strain 76-118) (Korean
Query: 3 LIILFLIA 10
+I+LF++A
Sbjct: 380 IIVLFMVA 387
>sp|E321_ADE03|EARLY E3 20.5 kDa glycoprotein|Human adenovirus B serotype 3
Query: 2 GLIILFL 8
GL+I+FL
Sbjct: 159 GLMIIFL 165
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 GLIILFL 8
GL++LFL
Sbjct: 1134 GLLMLFL 1140
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1157 GLLVMFL 1163
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1157 GLLVMFL 1163
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1086 GLLVMFL 1092
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1158 GLLVMFL 1164
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1158 GLLVMFL 1164
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1158 GLLVMFL 1164
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 GLIILFL 8
GL+++FL
Sbjct: 1158 GLLVMFL 1164
>sp|U91_HHV6Z|PROTEIN U91|Human herpesvirus 6B (strain Z29)
Query: 2 GLIILFLI 9
G+I+LF I
Sbjct: 104 GIILLFCI 111
437|Sequence|2181|2190|LFLIAIIWFP
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 5 AIIWFP 10
AI+WFP
Sbjct: 1112 AIVWFP 1117
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLIAIIWF 9
LFL +IW+
Sbjct: 837 LFLARLIWW 845
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 LFLIAIIWF 9
L +IA++W
Sbjct: 249 LAVIAVVWL 257
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 LIAIIWF 9
LIA +WF
Sbjct: 1516 LIAEMWF 1522
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 FLIAIIW 8
FL+ I+W
Sbjct: 1964 FLLTILW 1970
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 FLIAIIW 8
FL+ I+W
Sbjct: 1964 FLLTILW 1970
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LFLIAIIWF 9
+FL +IW+
Sbjct: 837 MFLARLIWW 845
>sp|LMP1_EBVR|LATENT membrane protein 1|Epstein-Barr virus (strain Raji) (HHV-4)
Query: 1 LFLIAIIW 8
++L+ I+W
Sbjct: 124 IYLLEILW 131
>sp|LMP1_EBVA8|LATENT membrane protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 LFLIAIIW 8
++L+ I+W
Sbjct: 124 IYLLEILW 131
438|Sequence|2186|2195|IIWFPLLFMS
>sp|MATRX_HMPVC|MATRIX protein|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 2 IWFPLL 7
IWFPL
Sbjct: 34 IWFPLF 39
>sp|RIR1_MONPV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Monkeypox virus (MPXV)
Query: 2 IWFPLLFM 9
+W P LFM
Sbjct: 332 LWIPDLFM 339
>sp|RIR1_VARV|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus
Query: 2 IWFPLLFM 9
+W P LFM
Sbjct: 332 LWIPDLFM 339
>sp|RIR1_VAR67|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Variola virus (isolate
Query: 2 IWFPLLFM 9
+W P LFM
Sbjct: 332 LWIPDLFM 339
>sp|RIR1_VACCC|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 IWFPLLFM 9
+W P LFM
Sbjct: 332 LWIPDLFM 339
>sp|RIR1_VACCA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 2 IWFPLLFM 9
+W P LFM
Sbjct: 332 LWIPDLFM 339
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2339 WLPELFM 2345
Query: 2 IWFPLLFMS 10
+WF LL+++
Sbjct: 3124 LWFCLLYIA 3132
Query: 2 IWFPLL 7
IW P+L
Sbjct: 478 IWIPIL 483
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2339 WLPELFM 2345
Query: 2 IWFPLLFMS 10
+WF LL+++
Sbjct: 3124 LWFCLLYIA 3132
Query: 2 IWFPLL 7
IW P+L
Sbjct: 478 IWIPIL 483
>sp|DR2_HHV6U|UNCHARACTERIZED protein DR2|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WFPLLFMS 10
W P F+S
Sbjct: 219 WLPFAFLS 226
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 FPLLFMS 10
FPLLF++
Sbjct: 3599 FPLLFVT 3605
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 FPLLFMS 10
FPLLF++
Sbjct: 3599 FPLLFVT 3605
>sp|DR1_HHV6U|UNCHARACTERIZED protein DR1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 WFPLLFMS 10
W P F+S
Sbjct: 288 WLPFAFLS 295
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 3 WFPLLFMS 10
++PLLF++
Sbjct: 3742 YYPLLFIT 3749
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 WFPLLFMS 10
++PLLF++
Sbjct: 3742 YYPLLFIT 3749
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2427 WLPDLFM 2433
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2397 WLPDLFM 2403
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2377 WLPDLFM 2383
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 IIWFPLL 7
I WFPL
Sbjct: 473 INWFPLF 479
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2427 WLPDLFM 2433
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2397 WLPDLFM 2403
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 WFPLLFM 9
W P LFM
Sbjct: 2377 WLPDLFM 2383
>sp|NSP2_ROTHC|NON-STRUCTURAL protein 2|Rotavirus C (isolate RVC/Human/United
Query: 1 IIWFPL 6
++W+P+
Sbjct: 17 VVWYPI 22
>sp|VL1_HPV25|MAJOR capsid protein L1|Human papillomavirus 25
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 336 ICWFNQLFVT 345
>sp|VL1_HPV21|MAJOR capsid protein L1|Human papillomavirus 21
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 337 ICWFNQLFVT 346
>sp|VL1_HPV20|MAJOR capsid protein L1|Human papillomavirus 20
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 335 ICWFNQLFVT 344
>sp|VL1_HPV19|MAJOR capsid protein L1|Human papillomavirus 19
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 365 ICWFNQLFVT 374
>sp|VL1_HPV14|MAJOR capsid protein L1|Human papillomavirus 14
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 337 ICWFNQLFVT 346
>sp|OBP_VZVO|REPLICATION origin-binding protein|Varicella-zoster virus (strain Oka vaccine)
Query: 3 WFPLL 7
WFP+L
Sbjct: 595 WFPVL 599
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 3 WFPLL 7
WFP+L
Sbjct: 595 WFPVL 599
>sp|VL1_HPV62|MAJOR capsid protein L1|Human papillomavirus 62
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 324 ICWFNELFVT 333
>sp|VL1_HPV61|MAJOR capsid protein L1|Human papillomavirus type 61
Query: 1 IIWFPLLFMS 10
I WF LF++
Sbjct: 324 ICWFNELFVT 333
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 1 IIWFPLL 7
+IW PL+
Sbjct: 372 LIWQPLI 378
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 1 IIWFPLL 7
IIW P+L
Sbjct: 23 IIWTPVL 29
439|Sequence|2191|2200|LLFMSLVRSV
***** No hits found ******
440|Sequence|2196|2205|LVRSVVGVVN
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 LVRSVVG 7
LVRSV+G
Sbjct: 930 LVRSVIG 936
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 LVRSVVG 7
LVRSV+G
Sbjct: 930 LVRSVMG 936
441|Sequence|2201|2210|VGVVNQPIDV
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 VGVVNQPIDV 10
+G +NQ +DV
Sbjct: 937 IGELNQTVDV 946
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 2 GVVNQPIDV 10
G VNQ +DV
Sbjct: 953 GNVNQTVDV 961
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 4 VNQPID 9
VN+PID
Sbjct: 623 VNRPID 628
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 4 VNQPID 9
VN+PID
Sbjct: 623 VNRPID 628
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VNQPID 9
VN+PID
Sbjct: 623 VNRPID 628
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VNQPID 9
VN+PID
Sbjct: 623 VNRPID 628
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VNQPID 9
VN+PID
Sbjct: 623 VNRPID 628
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 4 VNQPID 9
VN+PID
Sbjct: 623 VNRPID 628
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 4 VNQPID 9
VN+PID
Sbjct: 613 VNRPID 618
>sp|DPOL_HBVD6|PROTEIN P|Hepatitis B virus genotype D
Query: 4 VNQPID 9
VN+PID
Sbjct: 613 VNRPID 618
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 4 VNQPID 9
VN+PID
Sbjct: 613 VNRPID 618
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 4 VNQPID 9
VN+PID
Sbjct: 613 VNRPID 618
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 619 VNRPID 624
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 4 VNQPID 9
VN+PID
Sbjct: 624 VNRPID 629
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 VNQPID 9
VN+PID
Sbjct: 626 VNRPID 631
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 4 VNQPID 9
VN+PID
Sbjct: 626 VNRPID 631
>sp|DPOL_HBVA7|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VNQPID 9
VN+PID
Sbjct: 626 VNRPID 631
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 VNQPID 9
VN+PID
Sbjct: 619 VNRPID 624
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 4 VNQPID 9
VN+PID
Sbjct: 626 VNRPID 631
>sp|DPOL_HBVA4|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VNQPID 9
VN+PID
Sbjct: 626 VNRPID 631
>sp|DPOL_HBVA3|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VNQPID 9
VN+PID
Sbjct: 626 VNRPID 631
>sp|DPOL_HBVA2|PROTEIN P|Hepatitis B virus genotype A2
Query: 4 VNQPID 9
VN+PID
Sbjct: 619 VNRPID 624
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 VGVVNQPIDV 10
+ ++N PI++
Sbjct: 97 IDIINHPINI 106
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 VGVVNQPIDV 10
+GV+ +PI V
Sbjct: 538 IGVLKEPIYV 547
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 5 NQPIDV 10
N+P+DV
Sbjct: 778 NRPVDV 783
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 5 NQPIDV 10
N+P+DV
Sbjct: 778 NRPVDV 783
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 VGVVNQPIDV 10
+ ++N PI++
Sbjct: 97 IDIINTPINI 106
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 VGVVNQPIDV 10
+ ++N PI++
Sbjct: 97 IDIINTPINI 106
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 VGVVNQPIDV 10
+ ++N PI++
Sbjct: 97 IDIINTPINI 106
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 2 GVVNQPI 8
G+VN P+
Sbjct: 1246 GMVNSPV 1252
>sp|HN_MUMPM|HEMAGGLUTININ-NEURAMINIDASE virus genotype B (strain
Query: 1 VGVVNQPI 8
VGV+NQ I
Sbjct: 86 VGVMNQVI 93
>sp|HN_MUMPR|HEMAGGLUTININ-NEURAMINIDASE virus (strain RW) (MuV)
Query: 1 VGVVNQPI 8
VGV+NQ I
Sbjct: 86 VGVMNQVI 93
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 VGVVNQPI 8
VGV+NQ I
Sbjct: 86 VGVMNQVI 93
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 VGVVNQPI 8
VGV+NQ I
Sbjct: 86 VGVMNQVI 93
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 VGVVNQPI 8
VGV+NQ I
Sbjct: 86 VGVMNQVI 93
442|Sequence|2206|2215|QPIDVTVTLK
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 QPIDVTVTL 9
QPIDVT L
Sbjct: 1128 QPIDVTCNL 1136
>sp|VE2_HPV28|REGULATORY protein E2|Human papillomavirus 28
Query: 1 QPIDVTVT 8
QP+DVT T
Sbjct: 268 QPLDVTRT 275
>sp|VE8E2_HPV28|PROTEIN E8^E2C|Human papillomavirus 28
Query: 1 QPIDVTVT 8
QP+DVT T
Sbjct: 68 QPLDVTRT 75
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 1 QPIDVTVT 8
+PIDVT +
Sbjct: 1826 EPIDVTTS 1833
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 PIDVTVTLK 10
PID T+ K
Sbjct: 2579 PIDTTIMAK 2587
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 1 QPIDVTVT 8
+PID+T +
Sbjct: 1827 EPIDITTS 1834
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 QPIDVTVTLK 10
QP+ T+T++
Sbjct: 797 QPVQYTLTVR 806
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 1 QPIDVTVTLK 10
+P+D T+T +
Sbjct: 257 EPVDTTLTYE 266
443|Sequence|2211|2220|TVTLKLGGYE
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 397 SITLKLGDY 405
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 TVTLKLGGY 9
++TLKLG Y
Sbjct: 469 SITLKLGDY 477
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 VTLKLGGY 9
VTL LGG+
Sbjct: 2049 VTLDLGGF 2056
Query: 5 KLGGYE 10
KLG YE
Sbjct: 1040 KLGSYE 1045
>sp|POL_HV1J3|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VTLK+GG
Sbjct: 499 VTLKIGG 505
>sp|NCAP_BUNYW|NUCLEOPROTEIN virus (BUNV)
Query: 2 VTLKLGGYE 10
VTL LGG++
Sbjct: 61 VTLNLGGWK 69
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 2 VTLKLGG 8
+TLK+GG
Sbjct: 550 ITLKVGG 556
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 2 VTLKLGG 8
+TLK+GG
Sbjct: 550 ITLKVGG 556
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 2 VTLKLGG 8
+TLK+GG
Sbjct: 550 ITLKVGG 556
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 TVTLKLGGY 9
T+T++ GG+
Sbjct: 1833 TITIQAGGF 1841
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 493 VTIKIGG 499
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 503 VTIKIGG 509
>sp|POL_HV1C4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTIKIGG 505
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 500 VTIKIGG 506
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 503 VTIKIGG 509
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 498 VTIKIGG 504
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTIKIGG 505
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTIKIGG 505
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 511 VTIKIGG 517
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 511 VTIKIGG 517
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTIKIGG 505
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTIKIGG 505
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 511 VTIKIGG 517
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 505 VTIKIGG 511
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 496 VTIKIGG 502
>sp|POL_HV1U4|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 492 VTVKIGG 498
>sp|POL_HV1SE|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 497 VTVKIGG 503
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTVKIGG 505
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 494 VTIKVGG 500
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 500 VTVKIGG 506
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 498 VTIKVGG 504
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 499 VTIKVGG 505
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 TVTLKLGGY 9
+ TLKLG Y
Sbjct: 465 SYTLKLGEY 473
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 1 TVTLKLGGY 9
+ TLKLG Y
Sbjct: 465 SYTLKLGEY 473
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 TVTLKLGGY 9
+ TLKLG Y
Sbjct: 461 SYTLKLGEY 469
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 VTLKLGG 8
VT+K+GG
Sbjct: 494 VTVKVGG 500
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 TVTLKLGG 8
+ T+KLGG
Sbjct: 69 SFTVKLGG 76
>sp|NSP4_ROTHT|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 3 TLKLGGY 9
T +LGGY
Sbjct: 531 TRQLGGY 537
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 TLKLGGY 9
T +LGGY
Sbjct: 854 TRQLGGY 860
>sp|NSP4_ROTHD|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTH1|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 5 KLGGYE 10
KLG YE
Sbjct: 1039 KLGSYE 1044
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 5 KLGGYE 10
KLG YE
Sbjct: 1039 KLGSYE 1044
>sp|NSP4_ROTWI|NON-STRUCTURAL glycoprotein 4|Rotavirus A (isolate RVA/Human/United
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTH4|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTH2|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTKU|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTHS|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTH6|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|SPIKE_ADE12|FIBER protein|Human adenovirus A serotype 12
Query: 1 TVTLKLG 7
T+TLKLG
Sbjct: 67 TLTLKLG 73
>sp|NSP4_ROTAM|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain RVA/Human/United
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
>sp|NSP4_ROTYO|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 4 LKLGGYE 10
LKL GY+
Sbjct: 80 LKLAGYK 86
444|Sequence|2216|2225|LGGYEPLFTM
>sp|ORF11_HHV8P|PROTEIN ORF11|Human herpesvirus 8 type P
Query: 3 GYEPLFTM 10
G+EP FT+
Sbjct: 170 GFEPQFTV 177
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 LGGYEPLFT 9
GG EPL T
Sbjct: 306 FGGDEPLVT 314
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 LGGYEPLFT 9
GG EPL T
Sbjct: 306 FGGDEPLVT 314
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 5 EPLFTM 10
EPLFT+
Sbjct: 544 EPLFTI 549
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 2 GGYEPLF 8
GG+EP++
Sbjct: 759 GGHEPVY 765
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 709 GYRPVFS 715
>sp|ENV_HV2ST|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 700 GYRPVFS 706
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 698 GYRPVFS 704
>sp|ENV_HV2S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 700 GYRPVFS 706
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 706 GYRPVFS 712
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 697 GYRPVFS 703
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 698 GYRPVFS 704
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 697 GYRPVFS 703
>sp|ENV_HV2EH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 704 GYRPVFS 710
>sp|ENV_HV2D2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 708 GYRPVFS 714
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 696 GYRPVFS 702
>sp|ENV_HV2CA|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 707 GYRPVFS 713
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 3 GYEPLFT 9
GY P+F+
Sbjct: 705 GYRPVFS 711
>sp|PG005_VACCC|PROTEIN OPG005|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LGGYEPLFTM 10
+ GY FTM
Sbjct: 23 INGYRSTFTM 32
>sp|LTP_HHV6Z|LARGE tegument protein deneddylase|Human herpesvirus 6B (strain Z29)
Query: 1 LGGYEPLFTM 10
L GYE F M
Sbjct: 1835 LTGYEMTFAM 1844
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 1 LGGYEPLFTM 10
L GYE F M
Sbjct: 1835 LTGYEMTFAM 1844
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 1 LGGYEPLFTM 10
L GYE F M
Sbjct: 1835 LTGYEMTFAM 1844
>sp|HBSAG_HBVF6|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LGGYEPLFT 9
+GGY P FT
Sbjct: 60 VGGYGPGFT 68
>sp|PG070_VACCC|PROTEIN OPG070|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 GGYEPLFT 9
G Y+PLF+
Sbjct: 177 GDYKPLFS 184
>sp|PG070_MONPV|PROTEIN OPG070|Monkeypox virus (MPXV)
Query: 2 GGYEPLFT 9
G Y+PLF+
Sbjct: 177 GDYKPLFS 184
>sp|HBSAG_HBVF3|LARGE envelope protein|Hepatitis B virus genotype F1
Query: 1 LGGYEPLFT 9
+GGY P FT
Sbjct: 60 VGGYGPGFT 68
>sp|HBSAG_HBVF4|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LGGYEPLFT 9
+GGY P FT
Sbjct: 60 VGGYGPGFT 68
>sp|PG070_VARV|PROTEIN OPG070|Variola virus
Query: 2 GGYEPLFT 9
G Y+PLF+
Sbjct: 177 GDYKPLFS 184
>sp|PG070_VAR67|PROTEIN OPG070|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 GGYEPLFT 9
G Y+PLF+
Sbjct: 177 GDYKPLFS 184
>sp|HBSAG_HBVF1|LARGE envelope protein|Hepatitis B virus genotype F2
Query: 1 LGGYEPLFT 9
+GGY P FT
Sbjct: 60 VGGYGPGFT 68
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 LGGYEP 6
LG YEP
Sbjct: 1144 LGQYEP 1149
>sp|GM_HHV11|ENVELOPE glycoprotein M|Human herpesvirus 1 (strain 17)
Query: 1 LGGYEP 6
+GGY+P
Sbjct: 454 VGGYDP 459
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 LGGYEP 6
LGG EP
Sbjct: 2203 LGGVEP 2208
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 1 LGGYEPL 7
L GY+PL
Sbjct: 827 LRGYKPL 833
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 3 GYEPLFT 9
G++P FT
Sbjct: 665 GFDPYFT 671
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 3 GYEPLFT 9
G++P FT
Sbjct: 667 GFDPYFT 673
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 3 GYEPLF 8
GY+PL+
Sbjct: 165 GYDPLW 170
445|Sequence|2221|2230|PLFTMSAQQP
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLFTMSAQQ 9
PLF S+QQ
Sbjct: 1306 PLFLTSSQQ 1314
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLFTMSAQQ 9
PLF S+QQ
Sbjct: 1306 PLFLTSSQQ 1314
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLFTMSAQQ 9
PLF S+QQ
Sbjct: 1306 PLFLTSSQQ 1314
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 PLFTMSAQQ 9
PLF S+QQ
Sbjct: 1306 PLFLTSSQQ 1314
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 PLFTMSAQQP 10
P+ TM+ QP
Sbjct: 196 PIHTMALSQP 205
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 1 PLFTMSAQQP 10
P+ TM+ QP
Sbjct: 196 PIHTMALSQP 205
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 1 PLFTMSAQQP 10
P+ TM+ QP
Sbjct: 196 PIHTMALSQP 205
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 PLFTMSAQQP 10
P+ TM+ QP
Sbjct: 196 PIHTMALSQP 205
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 2 LFTMSAQQP 10
L MSA+QP
Sbjct: 140 LIRMSAKQP 148
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 2 LFTMSAQQP 10
L MSA+QP
Sbjct: 140 LIRMSAKQP 148
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 LFTMSAQQP 10
L MSA+QP
Sbjct: 140 LIRMSAKQP 148
>sp|NEC1_HHV7J|NUCLEAR egress protein 1|Human herpesvirus 7 (strain JI)
Query: 2 LFTMSAQQP 10
L MSA+QP
Sbjct: 137 LIRMSAKQP 145
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 LFTMSAQQP 10
LF+ A+QP
Sbjct: 402 LFSTGAKQP 410
446|Sequence|2226|2235|SAQQPSIIPF
>sp|NEP_INCY6|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/1964)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 110 SNQEPSSIP 118
>sp|NEP_INCTA|NUCLEAR export protein|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 105 SNQEPSSIP 113
>sp|NEP_INCJH|NUCLEAR export protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 105 SNQEPSSIP 113
>sp|NEP_INCCA|NUCLEAR export protein|Influenza C virus (strain C/California/1978)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 110 SNQEPSSIP 118
>sp|NEP_INCAA|NUCLEAR export protein|Influenza C virus (strain C/Ann
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 110 SNQEPSSIP 118
>sp|NEP_INCYA|NUCLEAR export protein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 105 SNQEPSSIP 113
>sp|NEP_INCMI|NUCLEAR export protein|Influenza C virus (strain C/Mississippi/1980)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 105 SNQEPSSIP 113
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SAQQPSIIP 9
S Q P +IP
Sbjct: 329 SVQSPRLIP 337
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SAQQPSIIP 9
S Q P +IP
Sbjct: 329 SVQSPRLIP 337
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 QQPSIIP 9
Q+PS+IP
Sbjct: 1213 QRPSVIP 1219
>sp|POLN_HEVME|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 2
Query: 3 QQPSIIP 9
Q+PS+IP
Sbjct: 1211 QRPSVIP 1217
>sp|POLN_HEVHY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 QQPSIIP 9
Q+PS+IP
Sbjct: 1213 QRPSVIP 1219
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 QQPSIIP 9
Q+PS+IP
Sbjct: 1213 QRPSVIP 1219
>sp|NEP_INCJJ|NUCLEAR export protein|Influenza C virus (strain C/JJ/1950)
Query: 1 SAQQPSIIP 9
S Q+PS IP
Sbjct: 110 SNQEPSSIP 118
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 QQPSIIP 9
Q+PS+IP
Sbjct: 1213 QRPSVIP 1219
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 3 QQPSIIP 9
Q+PS+IP
Sbjct: 1213 QRPSVIP 1219
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 4 QPSIIP 9
QP++IP
Sbjct: 1691 QPAVIP 1696
447|Sequence|2231|2240|SIIPFTAQAY
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 3 IPFTAQAY 10
IPF +QAY
Sbjct: 633 IPFCSQAY 640
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 IPFTAQAY 10
IPF +QAY
Sbjct: 636 IPFCSQAY 643
>sp|POL_HV197|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
I+P TA+A
Sbjct: 874 IVPLTAEA 881
>sp|POL_HV19N|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
I+P TA+A
Sbjct: 879 IVPLTAEA 886
>sp|POL_HV1VI|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
I+P TA+A
Sbjct: 873 IVPLTAEA 880
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
I+P TA+A
Sbjct: 884 IVPLTAEA 891
>sp|POL_HV196|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
I+P TA+A
Sbjct: 874 IVPLTAEA 881
>sp|POL_HV1M2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
++P TA+A
Sbjct: 878 VVPLTAEA 885
>sp|POL_HV1MP|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 IIPFTAQA 9
++P TA+A
Sbjct: 874 VVPLTAEA 881
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 IIPFTAQAY 10
+IP AQA+
Sbjct: 383 MIPVVAQAF 391
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 IIPFTAQAY 10
I+P+TA Y
Sbjct: 3086 IVPYTALYY 3094
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 IIPFTAQAY 10
I+P+TA Y
Sbjct: 3086 IVPYTALYY 3094
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 IIPFTAQAY 10
++P AQA+
Sbjct: 383 LLPIVAQAF 391
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 IIPFTAQAY 10
++P AQA+
Sbjct: 383 LLPIVAQAF 391
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 IIPFTAQAY 10
++P AQA+
Sbjct: 383 LLPIVAQAF 391
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 IIPFTAQAY 10
++P AQA+
Sbjct: 381 LLPIVAQAF 389
448|Sequence|2236|2245|TAQAYEELSR
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 AQAYEELS 9
AQ YEEL+
Sbjct: 192 AQCYEELT 199
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 AQAYEELS 9
AQ YEEL+
Sbjct: 192 AQCYEELT 199
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 1 TAQAYEEL 8
TA AYE+L
Sbjct: 382 TASAYEDL 389
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 2 AQAYEELS 9
+QA+EE+S
Sbjct: 32 SQAFEEIS 39
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 TAQAYEELS 9
++QA+EE++
Sbjct: 814 SSQAFEEIN 822
449|Sequence|2241|2250|EELSRQFDPQ
>sp|NCAP_LBV|NUCLEOPROTEIN bat virus (LBV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIKRMFEP 275
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIKRMFEP 275
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_ABLVH|NUCLEOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|NCAP_ABLVB|NUCLEOPROTEIN bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 EELSRQFDP 9
EE+ R F+P
Sbjct: 267 EEIRRMFEP 275
>sp|VU25_HHV7J|PROTEIN U25|Human herpesvirus 7 (strain JI)
Query: 1 EELSRQFD 8
EELSRQ +
Sbjct: 278 EELSRQIN 285
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 EELSRQFDPQ 10
E+ RQF PQ
Sbjct: 446 EQDPRQFPPQ 455
>sp|ORF4B_MERS1|NON-STRUCTURAL protein ORF4b|Middle East respiratory syndrome-related coronavirus
Query: 1 EELSRQFDP 9
E+L+R F P
Sbjct: 105 EDLARDFSP 113
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 1 EELSRQFDPQ 10
LSR F PQ
Sbjct: 194 SHLSRLFSPQ 203
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 5 RQFDPQ 10
R+FDP+
Sbjct: 488 REFDPK 493
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 5 RQFDPQ 10
R+FDP+
Sbjct: 488 REFDPK 493
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 5 RQFDPQ 10
R+FDP+
Sbjct: 488 REFDPK 493
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 5 RQFDPQ 10
R+FDP+
Sbjct: 488 REFDPK 493
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 3 LSRQFDP 9
L R+FDP
Sbjct: 2030 LCRRFDP 2036
>sp|VPR_HV2BE|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 EELSRQFDPQ 10
EE R FDP+
Sbjct: 33 EEALRHFDPR 42
>sp|NCAP_JUNIN|NUCLEOPROTEIN mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 ELSRQFDPQ 10
E +RQFD Q
Sbjct: 480 EQARQFDQQ 488
>sp|VPR_HV2UC|PROTEIN Vpr|Human immunodeficiency virus type 2
Query: 1 EELSRQFDPQ 10
+E R FDP+
Sbjct: 33 QEALRHFDPR 42
450|Sequence|2246|2255|QFDPQPLAMQ
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 3 DPQPLAMQ 10
DPQP+AM+
Sbjct: 1784 DPQPIAME 1791
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 FDPQPLAM 9
+DP+PL++
Sbjct: 1409 YDPEPLSL 1416
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 FDPQPLAM 9
+DP+PL++
Sbjct: 1409 YDPEPLSL 1416
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 FDPQPLAM 9
+DP+PL++
Sbjct: 1409 YDPEPLSL 1416
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 DPQPLAMQ 10
+PQPL M+
Sbjct: 1784 NPQPLTME 1791
>sp|3BHST_VAR67|TRUNCATED 3-beta hydroxy-5-ene steroid dehydrogenase|Variola virus (isolate
Query: 3 DPQPL 7
DPQPL
Sbjct: 38 DPQPL 42
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 FDPQPLA 8
+DP PLA
Sbjct: 1407 YDPDPLA 1413
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 3 DPQPLAMQ 10
+PQPL+++
Sbjct: 1795 NPQPLSLE 1802
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PQPLA 8
PQPLA
Sbjct: 260 PQPLA 264
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 FDPQPL 7
FD QPL
Sbjct: 6259 FDAQPL 6264
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 FDPQPLAM 9
FD QP+A+
Sbjct: 1372 FDRQPIAV 1379
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 FDPQPLA 8
FD QP+A
Sbjct: 1372 FDKQPVA 1378
>sp|POLS_SFV|STRUCTURAL polyprotein|Semliki forest virus (SFV)
Query: 3 DPQPLAMQ 10
DPQP+ +
Sbjct: 465 DPQPVGRE 472
>sp|POLSF_SFV|FRAMESHIFTED structural polyprotein|Semliki forest virus (SFV)
Query: 3 DPQPLAMQ 10
DPQP+ +
Sbjct: 465 DPQPVGRE 472
451|Sequence|2251|2260|PLAMQFISQY
>sp|GH_HCMVT|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 PLAMQFISQ 9
PLA QF++Q
Sbjct: 100 PLAEQFLNQ 108
>sp|GH_HCMVM|ENVELOPE glycoprotein H|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLAMQFISQ 9
PLA QF++Q
Sbjct: 100 PLAEQFLNQ 108
>sp|GH_HCMVA|ENVELOPE glycoprotein H|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PLAMQFISQ 9
PLA QF++Q
Sbjct: 101 PLAEQFLNQ 109
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PLAMQFISQ 9
PL + FIS+
Sbjct: 556 PLCLDFISK 564
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PLAMQFISQ 9
PL + FIS+
Sbjct: 556 PLCLDFISK 564
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 PLAMQFISQY 10
PL M S+Y
Sbjct: 498 PLVMSMFSRY 507
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 1 PLAMQFISQY 10
PL M S+Y
Sbjct: 498 PLVMSMFSRY 507
>sp|GLYCO_ISFV|GLYCOPROTEIN virus (ISFV)
Query: 1 PLAMQFISQ 9
P+A F+S+
Sbjct: 435 PIAQAFVSE 443
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 PLAMQFISQY 10
P QF+S Y
Sbjct: 490 PGMQQFVSSY 499
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 PLAMQFISQY 10
P QF+S Y
Sbjct: 490 PGMQQFVSSY 499
452|Sequence|2256|2265|FISQYSPEDI
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 FISQYSPE 8
F+ QY PE
Sbjct: 454 FVKQYGPE 461
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 FISQYSPE 8
F+ QY PE
Sbjct: 454 FVKQYGPE 461
>sp|PG085_YLDV|PROBABLE metalloendopeptidase G1-type|Yaba-like disease virus (YLDV)
Query: 1 FISQYSPEDI 10
F+S YS EDI
Sbjct: 458 FVSGYSIEDI 467
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 4 QYSPEDI 10
QY PEDI
Sbjct: 652 QYIPEDI 658
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 2 ISQYSPEDI 10
+S Y PED+
Sbjct: 124 VSIYEPEDL 132
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 5 YSPEDI 10
Y PEDI
Sbjct: 180 YEPEDI 185
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FISQYSPED 9
FIS PED
Sbjct: 2371 FISYAKPED 2379
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 FISQYSPED 9
FIS PED
Sbjct: 2371 FISYAKPED 2379
Query: 1 FISQYSPED 9
FI++Y ED
Sbjct: 6303 FINKYGLED 6311
>sp|MATRX_MUMPZ|MATRIX protein|Mumps virus genotype N (strain
Query: 1 FISQYSPEDI 10
FIS+ SP+ +
Sbjct: 73 FISESSPQKV 82
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 5 YSPEDI 10
+SPED+
Sbjct: 683 FSPEDV 688
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 FISQYSPE 8
+SQY+P+
Sbjct: 47 LVSQYTPD 54
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 FISQYSPE 8
+SQY+P+
Sbjct: 57 LVSQYTPD 64
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 FISQYSPE 8
+SQY+P+
Sbjct: 57 LVSQYTPD 64
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 FISQYSPE 8
+ QY+PE
Sbjct: 434 LVKQYAPE 441
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 FISQYSPE 8
+ QY+PE
Sbjct: 434 LVKQYAPE 441
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FISQYSP 7
F+SQY P
Sbjct: 470 FVSQYIP 476
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FISQYSP 7
F+SQY P
Sbjct: 470 FVSQYIP 476
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FISQYSP 7
F+SQY P
Sbjct: 470 FVSQYIP 476
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 FISQYSPE 8
+ QY PE
Sbjct: 453 LVKQYGPE 460
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 FISQYSPE 8
+ QY PE
Sbjct: 453 LVKQYGPE 460
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 SQYSPED 9
S+Y+P+D
Sbjct: 353 SKYTPDD 359
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 FISQYSPE 8
+ QY PE
Sbjct: 453 LVKQYGPE 460
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 FISQYSPE 8
+ QY PE
Sbjct: 453 LVKQYGPE 460
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 QYSPEDI 10
+++PED+
Sbjct: 3537 EFTPEDV 3543
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 QYSPEDI 10
+++PED+
Sbjct: 3537 EFTPEDV 3543
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 FISQYSPEDI 10
FI+ +P+D+
Sbjct: 426 FITNNNPQDL 435
>sp|VP1_POVWU|MAJOR capsid protein VP1|WU polyomavirus (WUPyV)
Query: 2 ISQYSPEDI 10
+SQ +P DI
Sbjct: 97 LSQVAPPDI 105
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 2 ISQYSPEDI 10
+++Y PE+I
Sbjct: 943 VTKYYPEEI 951
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 2 ISQYSPEDI 10
+++Y PE+I
Sbjct: 943 VTKYYPEEI 951
>sp|GL_HHV6U|ENVELOPE glycoprotein L|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 QYSPEDI 10
+YSPE I
Sbjct: 143 KYSPEKI 149
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 1 FISQYSPED 9
F+S++ P++
Sbjct: 234 FLSKFGPDE 242
>sp|PRIM_HHV11|DNA primase|Human herpesvirus 1 (strain 17)
Query: 1 FISQYSPED 9
F+S++ P++
Sbjct: 231 FLSKFGPDE 239
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 QYSPED 9
+YSPE+
Sbjct: 136 EYSPEE 141
453|Sequence|2261|2270|SPEDIVTAQI
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 1 SPEDIVTAQI 10
SP+D++ Q+
Sbjct: 253 SPQDLILQQL 262
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 SPEDIVTA 8
SPE+ VTA
Sbjct: 308 SPENAVTA 315
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 SPEDIVTA 8
SPE+ VTA
Sbjct: 308 SPENAVTA 315
>sp|HELI_VZVO|DNA replication helicase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 SPEDIVTAQI 10
+PE VTA I
Sbjct: 617 APESKVTASI 626
>sp|HELI_VZVD|DNA replication helicase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 SPEDIVTAQI 10
+PE VTA I
Sbjct: 617 APESKVTASI 626
>sp|RDRP_ROTJ1|RNA-DIRECTED RNA polymerase|Rotavirus X (strain
Query: 1 SPEDIVTAQI 10
+P+D + AQ+
Sbjct: 388 NPQDAIEAQV 397
>sp|RDRP_ROTB2|RNA-DIRECTED RNA polymerase|Rotavirus X (isolate
Query: 1 SPEDIVTAQI 10
+P+D + AQ+
Sbjct: 388 NPQDAIEAQV 397
>sp|KITH_EBVB9|THYMIDINE kinase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SPEDIV 6
+PEDIV
Sbjct: 483 APEDIV 488
>sp|KITH_EBVA8|THYMIDINE kinase|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SPEDIV 6
+PEDIV
Sbjct: 483 APEDIV 488
>sp|KITH_EBVG|THYMIDINE kinase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SPEDIV 6
+PEDIV
Sbjct: 483 APEDIV 488
454|Sequence|2266|2275|VTAQIEGSSG
>sp|POL_HV2NZ|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTAQIEG 7
VTA IEG
Sbjct: 521 VTAHIEG 527
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 VTAQIEG 7
VTA IEG
Sbjct: 523 VTAHIEG 529
455|Sequence|2271|2280|EGSSGALWRI
>sp|VL2_HPV56|MINOR capsid protein L2|Human papillomavirus 56
Query: 1 EGSSGALWRI 10
+GSS ALW +
Sbjct: 433 QGSSFALWPV 442
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 301 EGASGATW 308
Query: 1 EGSSGALW 8
EG++G +W
Sbjct: 2480 EGTAGVVW 2487
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 307 EGASGATW 314
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 305 EGASGATW 312
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 1 EGSSGALW 8
EG+SGA W
Sbjct: 235 EGASGATW 242
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 GSSGALWR 9
G SG+ WR
Sbjct: 1078 GCSGSPWR 1085
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 2 GSSGALWR 9
G SG+ WR
Sbjct: 1062 GCSGSPWR 1069
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 EGSSGALWRI 10
+GS+ ALW +
Sbjct: 432 QGSTFALWPV 441
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 GSSGALWRI 10
S G+LW I
Sbjct: 1756 ASQGSLWSI 1764
>sp|CAP3_ADE05|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 5
Query: 1 EGSSGALW 8
EG+ G LW
Sbjct: 405 EGNDGFLW 412
>sp|CAP3_ADE02|PRE-HEXON-LINKING protein IIIa|Human adenovirus C serotype 2
Query: 1 EGSSGALW 8
EG+ G LW
Sbjct: 405 EGNDGFLW 412
>sp|CAP3_ADE12|PRE-HEXON-LINKING protein IIIa|Human adenovirus A serotype 12
Query: 1 EGSSGALW 8
EG+ G LW
Sbjct: 413 EGNDGFLW 420
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 4 SGALWRI 10
+GALW I
Sbjct: 4079 AGALWDI 4085
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 4 SGALWRI 10
+GALW I
Sbjct: 4079 AGALWDI 4085
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 1 EGSSGALW 8
EGS G +W
Sbjct: 2481 EGSPGKIW 2488
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 EGSSGALW 8
EGS+G W
Sbjct: 2464 EGSAGKFW 2471
>sp|DPOL_HBVA8|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GSSGALW 8
G SG++W
Sbjct: 240 GRSGSIW 246
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 2 GSSGALWRI 10
GS+ ALW +
Sbjct: 433 GSTFALWPV 441
>sp|VE1_HPV08|REPLICATION protein E1|Human papillomavirus type 8
Query: 1 EGSSGAL 7
EG SGAL
Sbjct: 142 EGGSGAL 148
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 2 GSSGALW 8
G SG++W
Sbjct: 240 GRSGSIW 246
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GSSGALW 8
G SG++W
Sbjct: 238 GRSGSIW 244
>sp|DPOL_HBVA9|PROTEIN P|Hepatitis B virus genotype A3
Query: 2 GSSGALW 8
G SG++W
Sbjct: 240 GRSGSIW 246
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2448 EGSPGKFW 2455
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2448 EGSPGKFW 2455
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2448 EGSPGKFW 2455
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2448 EGSPGKFW 2455
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2448 EGSPGKFW 2455
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 2 GSSGALW 8
G SG++W
Sbjct: 238 GRSGSIW 244
>sp|TRM1_HHV11|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain 17)
Query: 2 GSSGALWRI 10
G SGA W +
Sbjct: 652 GGSGADWAV 660
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2451 EGSPGKFW 2458
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 2 GSSGALWRI 10
G SGA W +
Sbjct: 652 GGSGADWAV 660
>sp|TRM1_HHV1A|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain Angelotti)
Query: 2 GSSGALWRI 10
G SGA W +
Sbjct: 652 GGSGADWAV 660
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2451 EGSPGKFW 2458
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 EGSSGALW 8
EGS G W
Sbjct: 2450 EGSPGKFW 2457
>sp|TRM1_HHV1F|TRIPARTITE terminase subunit 1|Human herpesvirus 1 (strain F)
Query: 2 GSSGALWRI 10
G SGA W +
Sbjct: 647 GGSGADWAV 655
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1475 SGALWDV 1481
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1475 SGALWDV 1481
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1475 SGALWDV 1481
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1475 SGALWDV 1481
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1475 SGALWDV 1481
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 1 EGSSGALW 8
EG++G +W
Sbjct: 2476 EGAAGRIW 2483
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1499 SGALWDV 1505
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1503 SGALWDV 1509
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 4 SGALWRI 10
SGALW +
Sbjct: 1503 SGALWDV 1509
456|Sequence|2276|2285|ALWRISPPSR
>sp|NSP1_ROTAD|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 WRISPPSR 10
WR SPP+R
Sbjct: 30 WRPSPPTR 37
>sp|NSP1_ROTHP|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRSSPPTK 37
>sp|NSP1_ROTWI|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NSP1_ROTHW|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NSP1_ROTHU|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NSP1_ROTHT|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/United
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NSP1_ROTHK|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8])
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NSP1_ROTHJ|NON-STRUCTURAL protein 1|Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9])
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NSP1_ROTHI|NON-STRUCTURAL protein 1|Rotavirus A (isolate
Query: 3 WRISPPSR 10
WR SPP++
Sbjct: 30 WRPSPPTK 37
>sp|NCAP_GTOVV|NUCLEOPROTEIN mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
Query: 2 LWRISPPSR 10
LW +S PS+
Sbjct: 158 LWDVSDPSK 166
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 3 WRISPPSR 10
W I+PP R
Sbjct: 138 WCINPPER 145
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 3 WRISPPSR 10
W I+PP R
Sbjct: 138 WCINPPER 145
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 3 WRISPPSR 10
W I+PP R
Sbjct: 138 WCINPPER 145
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 WRISPPSR 10
W I+PP R
Sbjct: 138 WCINPPER 145
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 WRISPPSR 10
W I+PP R
Sbjct: 138 WCINPPER 145
>sp|HEMA_MEASY|HEMAGGLUTININ glycoprotein|Measles virus (strain Yamagata-1) (MeV)
Query: 3 WRISPPSR 10
W I+PP R
Sbjct: 138 WCINPPER 145
>sp|NCAP_MACHU|NUCLEOPROTEIN virus (MACV)
Query: 2 LWRISPPSR 10
+W +S PS+
Sbjct: 158 IWDVSDPSK 166
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 4 RISPPS 9
RISPP+
Sbjct: 1353 RISPPT 1358
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 4 RISPPS 9
RISPP+
Sbjct: 1353 RISPPT 1358
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 5 ISPPSR 10
ISPP R
Sbjct: 477 ISPPKR 482
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 LWRISPPSR 10
+W + PP+R
Sbjct: 800 VWSLCPPNR 808
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 LWRISPPSR 10
+W + PP+R
Sbjct: 800 VWSLCPPNR 808
>sp|NS1_PAVHV|INITIATOR protein NS1|Human parvovirus B19 (strain HV)
Query: 2 LWRISPPS 9
LW PPS
Sbjct: 324 LWFYGPPS 331
>sp|NS1_PAVHU|INITIATOR protein NS1|Human parvovirus B19 (isolate AU)
Query: 2 LWRISPPS 9
LW PPS
Sbjct: 324 LWFYGPPS 331
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 WRISPP 8
W++SPP
Sbjct: 2133 WQLSPP 2138
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 WRISPP 8
W++SPP
Sbjct: 2133 WQLSPP 2138
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2082 ALWRVS 2087
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2085 ALWRVS 2090
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2083 ALWRVS 2088
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2085 ALWRVS 2090
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2081 ALWRVS 2086
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2079 ALWRVS 2084
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2086 ALWRVS 2091
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2086 ALWRVS 2091
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2081 ALWRVS 2086
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2081 ALWRVS 2086
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2081 ALWRVS 2086
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2081 ALWRVS 2086
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 1 ALWRIS 6
ALWR+S
Sbjct: 2081 ALWRVS 2086
>sp|RL5A_HCMVM|PROTEIN RL5A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LWRIS 6
LWR+S
Sbjct: 89 LWRVS 93
>sp|GP_SFTSV|ENVELOPMENT polyprotein|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 LWRISP 7
+W++SP
Sbjct: 719 IWKVSP 724
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 2 LWRISPPSR 10
+W ++ P+R
Sbjct: 159 IWDVADPTR 167
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 LWRISP 7
+W++SP
Sbjct: 723 VWKVSP 728
>sp|NCAP_SABVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV)
Query: 2 LWRISPPSR 10
+W ++ P+R
Sbjct: 159 IWDVADPNR 167
457|Sequence|2281|2290|SPPSRAQMKR
>sp|SHUT_HHV1K|VIRION host shutoff protein|Human herpesvirus 1 (strain KOS)
Query: 1 SPPSRAQMKR 10
+PPSR+Q +R
Sbjct: 281 TPPSRSQTRR 290
>sp|SHUT_HHV11|VIRION host shutoff protein|Human herpesvirus 1 (strain 17)
Query: 1 SPPSRAQMKR 10
+PPSR+Q +R
Sbjct: 281 TPPSRSQTRR 290
>sp|YVAC_VACCC|UNCHARACTERIZED 14.4 kDa protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PSRAQMKR 10
PS++QM+R
Sbjct: 112 PSKSQMER 119
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 SPPSRAQMK 9
+PP R Q+K
Sbjct: 430 APPIRGQIK 438
>sp|MCP_HCMVM|MAJOR capsid protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 PPSRAQMKR 10
PPS M+R
Sbjct: 469 PPSEPAMQR 477
>sp|MCP_HCMVA|MAJOR capsid protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 PPSRAQMKR 10
PPS M+R
Sbjct: 469 PPSEPAMQR 477
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 PPSRAQMKR 10
PPS QM++
Sbjct: 1601 PPSWDQMRK 1609
458|Sequence|2286|2295|AQMKRELYNG
>sp|CEP1_VZVD|CYTOPLASMIC envelopment protein 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 QMKRELYNG 10
+M+R LY G
Sbjct: 205 KMRRFLYEG 213
>sp|NSP3_ROTGA|NON-STRUCTURAL protein 3|Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B)
Query: 3 MKRELY 8
MKRE+Y
Sbjct: 226 MKREIY 231
>sp|VL2_HPV60|MINOR capsid protein L2|Human papillomavirus type 60
Query: 5 RELYN 9
RELYN
Sbjct: 272 RELYN 276
>sp|A47_VARV|PROTEIN A47|Variola virus
Query: 2 QMKRELY 8
++KRE+Y
Sbjct: 64 ELKREIY 70
>sp|A47_VAR67|PROTEIN A47|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 QMKRELY 8
++KRE+Y
Sbjct: 64 ELKREIY 70
>sp|PG085_VARV|METALLOENDOPEPTIDASE OPG085|Variola virus
Query: 2 QMKRELYNG 10
+MK+++Y G
Sbjct: 15 RMKKDIYLG 23
>sp|PG085_VAR67|METALLOENDOPEPTIDASE OPG085|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 QMKRELYNG 10
+MK+++Y G
Sbjct: 15 RMKKDIYLG 23
>sp|PG085_VACCT|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Tian Tan)
Query: 2 QMKRELYNG 10
+MK+++Y G
Sbjct: 15 RMKKDIYLG 23
>sp|PG085_VACCC|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 QMKRELYNG 10
+MK+++Y G
Sbjct: 15 RMKKDIYLG 23
>sp|PG085_VACCA|METALLOENDOPEPTIDASE OPG085|Vaccinia virus (strain Ankara) (VACV)
Query: 2 QMKRELYNG 10
+MK+++Y G
Sbjct: 15 RMKKDIYLG 23
>sp|PG085_MONPV|METALLOENDOPEPTIDASE OPG085|Monkeypox virus (MPXV)
Query: 2 QMKRELYNG 10
+MK+++Y G
Sbjct: 15 RMKKDIYLG 23
459|Sequence|2291|2300|ELYNGTADIT
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 LYNGTADIT 10
L+NG +DIT
Sbjct: 1883 LWNGNSDIT 1891
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 LYNGTADIT 10
L+NG +DIT
Sbjct: 1883 LWNGNSDIT 1891
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 LYNGTADIT 10
L+NG +DIT
Sbjct: 1883 LWNGNSDIT 1891
>sp|MCP_VZVD|MAJOR capsid protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LYNGTADIT 10
LYNGT ++T
Sbjct: 1275 LYNGTYNLT 1283
>sp|MATRX_VSNJO|MATRIX protein|Vesicular stomatitis New Jersey virus
Query: 2 LYNGTADIT 10
LY GT D T
Sbjct: 166 LYKGTLDFT 174
>sp|MATRX_VSIVC|MATRIX protein|Vesicular stomatitis Indiana virus (strain
Query: 2 LYNGTADIT 10
LY GT ++T
Sbjct: 166 LYKGTVELT 174
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 3 YN--GTADIT 10
YN GTAD+T
Sbjct: 372 YNQAGTADVT 381
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|NS4B_CVH22|NON-STRUCTURAL protein 4b|Human coronavirus 229E (HCoV-229E)
Query: 1 ELYNG 5
ELYNG
Sbjct: 60 ELYNG 64
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 ELYNG 5
ELYNG
Sbjct: 2029 ELYNG 2033
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 627 QLYRGPLDLT 636
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 620 QLYRGPLDLT 629
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|PG094_VARV|ENTRY-FUSION complex protein OPG094|Variola virus
Query: 3 YNGTA 7
YNGTA
Sbjct: 81 YNGTA 85
>sp|PG094_VAR67|ENTRY-FUSION complex protein OPG094|Variola virus (isolate
Query: 3 YNGTA 7
YNGTA
Sbjct: 81 YNGTA 85
>sp|PG094_VACCT|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Tian Tan)
Query: 3 YNGTA 7
YNGTA
Sbjct: 81 YNGTA 85
>sp|PG094_VACCC|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 YNGTA 7
YNGTA
Sbjct: 81 YNGTA 85
>sp|PG094_VACCA|ENTRY-FUSION complex protein OPG094|Vaccinia virus (strain Ankara) (VACV)
Query: 3 YNGTA 7
YNGTA
Sbjct: 81 YNGTA 85
>sp|PG094_MONPV|ENTRY-FUSION complex protein OPG094|Monkeypox virus (MPXV)
Query: 3 YNGTA 7
YNGTA
Sbjct: 81 YNGTA 85
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 130 QLYRGPLDLT 139
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 626 QLYRGPLDLT 635
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 ELYNGTADIT 10
+LY G D+T
Sbjct: 605 QLYRGPLDLT 614
>sp|ORF27_HHV8P|PROTEIN ORF27|Human herpesvirus 8 type P
Query: 1 ELYNGT 6
++YNGT
Sbjct: 261 DIYNGT 266
>sp|GM_VZVO|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Oka vaccine)
Query: 1 ELYNGTAD 8
EL+N T D
Sbjct: 77 ELFNATLD 84
>sp|GM_VZVD|ENVELOPE glycoprotein M|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 ELYNGTAD 8
EL+N T D
Sbjct: 77 ELFNATLD 84
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 ELYNGTADI 9
E+Y GT I
Sbjct: 2142 EMYTGTNQI 2150
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 ELYNGTADI 9
E+Y GT I
Sbjct: 2142 EMYTGTNQI 2150
>sp|US06_HCMVT|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Towne)
Query: 3 YNGTADIT 10
YN T D T
Sbjct: 51 YNDTGDCT 58
>sp|US06_HCMVM|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain Merlin)
Query: 3 YNGTADIT 10
YN T D T
Sbjct: 50 YNDTGDCT 57
>sp|US06_HCMVA|UNIQUE short US6 glycoprotein|Human cytomegalovirus (strain AD169)
Query: 3 YNGTADIT 10
YN T D T
Sbjct: 51 YNDTGDCT 58
460|Sequence|2296|2305|TADITLRFTW
>sp|HN_PI3H4|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|HN_PI3HX|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|HN_PI3HA|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|HN_PI3HU|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|HN_PI3HW|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|HN_PI3HV|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|HN_PI3HT|HEMAGGLUTININ-NEURAMINIDASE parainfluenza 3 virus (strain
Query: 2 ADITLRFTW 10
+DI +++TW
Sbjct: 443 SDIRIKWTW 451
>sp|TRX2_HHV2H|TRIPLEX capsid protein 2|Human herpesvirus 2 (strain HG52)
Query: 3 DITLRF 8
D+TLRF
Sbjct: 134 DLTLRF 139
>sp|TRX2_HHV11|TRIPLEX capsid protein 2|Human herpesvirus 1 (strain 17)
Query: 3 DITLRF 8
D+TLRF
Sbjct: 134 DLTLRF 139
>sp|UL49_HHV7J|PROTEIN U33|Human herpesvirus 7 (strain JI)
Query: 3 DITLRF 8
DITLR+
Sbjct: 185 DITLRY 190
>sp|VU54_HHV6U|PROTEIN U54|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 TADITL 6
TADITL
Sbjct: 232 TADITL 237
>sp|VP4_ROTHY|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 DITLRFTW 10
DIT+RF +
Sbjct: 270 DITIRFKF 277
>sp|VU26_HHV6G|PROTEIN U26|Human herpesvirus 6A (strain GS)
Query: 4 ITLRFTW 10
IT+R+ W
Sbjct: 143 ITVRYGW 149
>sp|VU26_HHV6U|PROTEIN U26|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 ITLRFTW 10
IT+R+ W
Sbjct: 143 ITVRYGW 149
>sp|VP4_ROTHQ|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 DITLRFTW 10
DIT+RF +
Sbjct: 270 DITIRFKF 277
461|Sequence|2301|2310|LRFTWNFQRD
>sp|CAPSH_ADE16|HEXON protein|Human adenovirus B serotype 16
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 569 YVWNFRKD 576
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 450 YEWNFRKD 457
>sp|CAPSH_ADE03|HEXON protein|Human adenovirus B serotype 3
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 573 YEWNFRKD 580
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 572 YEWNFRKD 579
>sp|CAPSH_ADE02|HEXON protein|Human adenovirus C serotype 2
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 597 YEWNFRKD 604
>sp|CAPSH_ADE12|HEXON protein|Human adenovirus A serotype 12
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 548 YEWNFRKD 555
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 554 YEWNFRKD 561
>sp|CAPSH_ADE07|HEXON protein|Human adenovirus B serotype 7
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 566 YEWNFRKD 573
>sp|CAPSH_ADE05|HEXON protein|Human adenovirus C serotype 5
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 581 YEWNFRKD 588
>sp|CAPSH_ADE08|HEXON protein|Human adenovirus D serotype 8
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 499 YEWNFRKD 506
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LRFTWNFQR 9
L+FTW +R
Sbjct: 260 LKFTWTERR 268
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LRFTWNFQR 9
L+FTW +R
Sbjct: 260 LKFTWTERR 268
>sp|PHOSP_LBV|PHOSPHOPROTEIN bat virus (LBV)
Query: 3 FTWNFQR 9
F WNF++
Sbjct: 224 FLWNFEQ 230
>sp|PHOSP_DUVV|PHOSPHOPROTEIN virus (DUVV)
Query: 3 FTWNFQR 9
F WNF++
Sbjct: 224 FLWNFEQ 230
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 RFTWNFQRD 10
RFT + +RD
Sbjct: 2187 RFTMDMKRD 2195
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 RFTWNFQRD 10
RFT + +RD
Sbjct: 2187 RFTMDMKRD 2195
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 RFTWNFQRD 10
RFT + +RD
Sbjct: 2188 RFTMDMKRD 2196
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 2 RFTWNF 7
RFTW F
Sbjct: 1190 RFTWFF 1195
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 2 RFTWNF 7
RFTW F
Sbjct: 1190 RFTWFF 1195
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 WNFQRD 10
W FQ+D
Sbjct: 133 WKFQQD 138
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 3 FTWNFQRD 10
+ WNF++D
Sbjct: 552 YEWNFRKD 559
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 WNFQRD 10
W FQ+D
Sbjct: 133 WKFQQD 138
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 WNFQRD 10
W FQ+D
Sbjct: 133 WKFQQD 138
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 WNFQRD 10
W FQ+D
Sbjct: 133 WKFQQD 138
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 WNFQRD 10
W FQ+D
Sbjct: 133 WKFQQD 138
>sp|SPIK1_ADE41|FIBER protein 1|Human adenovirus F serotype 41
Query: 1 LRFTWNFQRD 10
L+FTW + +
Sbjct: 537 LKFTWRVRNN 546
>sp|SPIK1_ADE40|FIBER protein 1|Human adenovirus F serotype 40
Query: 1 LRFTWNFQRD 10
L+FTW + +
Sbjct: 522 LKFTWRVRNN 531
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 WNFQRD 10
W+++RD
Sbjct: 6538 WDYKRD 6543
>sp|CAPSD_HASVA|CAPSID polyprotein VP86|Human astrovirus VA1 (HAstV-VA1) (Mamastrovirus
Query: 2 RFTWNFQR 9
+FTW Q+
Sbjct: 181 QFTWKLQK 188
>sp|VP6_ROTGA|INTERMEDIATE capsid protein VP6|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 5 WNFQRD 10
WN Q+D
Sbjct: 288 WNTQKD 293
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 5 WNFQRD 10
W FQ D
Sbjct: 133 WKFQHD 138
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 5 WNFQRD 10
W FQRD
Sbjct: 227 WYFQRD 232
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 2 RFTWNF 7
+FTW F
Sbjct: 1196 KFTWFF 1201
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 2 RFTWNF 7
+FTW F
Sbjct: 1196 KFTWFF 1201
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 2 RFTWNF 7
+FTW F
Sbjct: 1196 KFTWFF 1201
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 2 RFTWNF 7
+FTW F
Sbjct: 1194 KFTWFF 1199
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 5 WNFQRD 10
W FQ+D
Sbjct: 230 WYFQKD 235
462|Sequence|2306|2315|NFQRDLAKGG
>sp|P100_HHV6Z|LARGE structural phosphoprotein|Human herpesvirus 6B (strain Z29)
Query: 2 FQRDLAKGG 10
+ RD+++GG
Sbjct: 600 YARDVSRGG 608
>sp|P100_HHV6H|LARGE structural phosphoprotein|Human herpesvirus 6B (HHV-6 variant
Query: 2 FQRDLAKGG 10
+ RD+++GG
Sbjct: 600 YARDVSRGG 608
>sp|GH_HHV2H|ENVELOPE glycoprotein H|Human herpesvirus 2 (strain HG52)
Query: 5 DLAKGG 10
DLA+GG
Sbjct: 596 DLAEGG 601
463|Sequence|2311|2320|LAKGGTVEYA
>sp|PHOSP_RABVI|PHOSPHOPROTEIN virus (strain India) (RABV)
Query: 1 LAKGGTVEY 9
+AK G V+Y
Sbjct: 69 MAKAGEVKY 77
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 3 KGGTVEY 9
KGG V+Y
Sbjct: 366 KGGKVKY 372
>sp|ENV_HV1S3|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 AKGGTVE 8
+ GGTVE
Sbjct: 143 SSGGTVE 149
>sp|VP2_POVWU|MINOR capsid protein VP2|WU polyomavirus (WUPyV)
Query: 2 AKGGTVEYA 10
A GGT YA
Sbjct: 327 ATGGTPHYA 335
464|Sequence|2316|2325|TVEYANEKHM
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 TVEYANEKHM 10
T+EY N H+
Sbjct: 917 TLEYINNPHL 926
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 TVEYANEKHM 10
T+EY N H+
Sbjct: 917 TLEYINNPHL 926
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 4 YANEKHM 10
Y N KHM
Sbjct: 1431 YENAKHM 1437
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 VEYANE 7
+EYANE
Sbjct: 314 LEYANE 319
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 2 VEYANE 7
+EYANE
Sbjct: 314 LEYANE 319
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 2 VEYANE 7
+EYANE
Sbjct: 314 LEYANE 319
>sp|GO_HHV6Z|130 kDa Glycoprotein O|Human herpesvirus 6B (strain Z29)
Query: 3 EYANEKH 9
EYANE H
Sbjct: 480 EYANETH 486
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 3 EYANEK 8
EYA+EK
Sbjct: 108 EYADEK 113
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EYANEK 8
EYA+EK
Sbjct: 95 EYADEK 100
>sp|VE2_HPV52|REGULATORY protein E2|Human papillomavirus 52
Query: 1 TVEYANEKH 9
TV+Y N+K+
Sbjct: 118 TVQYDNDKN 126
>sp|VE2_HPV33|REGULATORY protein E2|Human papillomavirus 33
Query: 1 TVEYANEK 8
TV+Y N+K
Sbjct: 118 TVQYDNDK 125
>sp|DNB2_ADE07|DNA-BINDING protein|Human adenovirus B serotype 7
Query: 3 EYANEKH 9
+Y NE+H
Sbjct: 206 QYVNEEH 212
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 1 TVEYANEK 8
TV+Y N K
Sbjct: 703 TVDYVNSK 710
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 1 TVEYANEK 8
TV+Y N K
Sbjct: 703 TVDYVNSK 710
465|Sequence|2321|2330|NEKHMLALAP
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 3 KHMLALAP 10
+H+LAL P
Sbjct: 530 RHVLALPP 537
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 NEKHMLALAP 10
+E+H+L +AP
Sbjct: 783 DERHVLDVAP 792
>sp|ENV_HV1S9|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NEKHMLAL 8
NEK +LAL
Sbjct: 650 NEKDLLAL 657
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NEKHMLAL 8
NEK +LAL
Sbjct: 648 NEKDLLAL 655
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 NEKHMLAL 8
NEK +LAL
Sbjct: 644 NEKDLLAL 651
>sp|VE1_HPV22|REPLICATION protein E1|Human papillomavirus 22
Query: 1 NEKHMLALAP 10
NE H+L+ P
Sbjct: 259 NENHILSEPP 268
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 3 KHMLALAP 10
+H+ ALAP
Sbjct: 418 RHLQALAP 425
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 2 EKHMLAL 8
++HMLAL
Sbjct: 335 DEHMLAL 341
Query: 1 NEKHMLALAP 10
NE MLA P
Sbjct: 266 NENRMLANPP 275
466|Sequence|2326|2335|LALAPNSTAR
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 2 ALAPNST 8
ALAPN+T
Sbjct: 720 ALAPNAT 726
467|Sequence|2331|2340|NSTARRQLAS
***** No hits found ******
468|Sequence|2336|2345|RQLASLLEGT
>sp|POL_HV1LW|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 864 RQLCKLLRGT 873
>sp|POL_HV1Z2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 865 RQLCKLLRGT 874
>sp|POL_HV1N5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 864 RQLCKLLRGT 873
>sp|POL_HV1EL|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 864 RQLCKLLRGT 873
>sp|POL_HV1H2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 864 RQLCKLLRGT 873
>sp|POL_HV1B1|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 876 RQLCKLLRGT 885
>sp|POL_HV1B5|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 876 RQLCKLLRGT 885
>sp|POL_HV1Y2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 864 RQLCKLLRGT 873
>sp|POL_HV1BR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
RQL LL GT
Sbjct: 876 RQLCKLLRGT 885
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL LL GT
Sbjct: 866 KQLCKLLRGT 875
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL LL GT
Sbjct: 861 KQLCKLLRGT 870
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL LL GT
Sbjct: 865 KQLCKLLRGT 874
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL LL GT
Sbjct: 870 KQLCKLLRGT 879
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL LL GT
Sbjct: 868 KQLCKLLRGT 877
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL LL GT
Sbjct: 864 KQLCKLLRGT 873
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL L+ GT
Sbjct: 874 KQLCKLIRGT 883
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
+QL L+ GT
Sbjct: 874 KQLCKLIRGT 883
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 RQLASLLEGT 10
R+L L+ GT
Sbjct: 863 RELCKLIRGT 872
469|Sequence|2341|2350|LLEGTSDQSV
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LLEGTSDQSV 10
+L+G S+QS+
Sbjct: 569 ILDGISEQSL 578
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LLEGTSDQSV 10
+L+G S+QS+
Sbjct: 569 ILDGISEQSL 578
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 1 LLEGTSDQSV 10
L GT DQ++
Sbjct: 681 LHHGTKDQTI 690
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 4 GTSDQS 9
GTSD+S
Sbjct: 293 GTSDES 298
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 LEGTSDQSV 10
L T+DQSV
Sbjct: 2599 LSPTADQSV 2607
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 1 LLEGTSDQS 9
L+ GTSD+S
Sbjct: 436 LVFGTSDRS 444
>sp|LMP2_EBVB9|LATENT membrane protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 GTSDQSV 10
GT DQS+
Sbjct: 78 GTQDQSL 84
>sp|LMP2_EBVA8|LATENT membrane protein 2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 4 GTSDQSV 10
GT DQS+
Sbjct: 78 GTQDQSL 84
>sp|LMP2_EBVG|LATENT membrane protein 2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 GTSDQSV 10
GT DQS+
Sbjct: 78 GTQDQSL 84
470|Sequence|2346|2355|SDQSVVIPNL
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 SDQSVVIPNL 10
S++SVVIP L
Sbjct: 815 SNKSVVIPKL 824
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 1 SDQSVVIPNL 10
S++SVVIP L
Sbjct: 816 SNKSVVIPKL 825
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 SDQSVVIPNL 10
S++SVVIP L
Sbjct: 815 SNKSVVIPKL 824
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 1 SDQSVVIPNL 10
S++SVV+P L
Sbjct: 815 SNKSVVVPKL 824
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 SDQSVVIPNL 10
S++SVV+P L
Sbjct: 819 SNKSVVVPKL 828
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 3 QSVVIPN 9
+SVV+PN
Sbjct: 1555 KSVVLPN 1561
>sp|PG037_VACCC|INHIBITOR of Apoptosis OPG037|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 DQSVVIP 8
D+S++IP
Sbjct: 423 DKSIIIP 429
>sp|PG037_MONPV|INHIBITOR of Apoptosis OPG037|Monkeypox virus (MPXV)
Query: 2 DQSVVIP 8
D+S++IP
Sbjct: 393 DKSIIIP 399
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 DQSVVIPN 9
DQS +PN
Sbjct: 2527 DQSPSVPN 2534
>sp|PG037_VAR67|INHIBITOR of Apoptosis OPG037|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 DQSVVIP 8
D+S++IP
Sbjct: 397 DKSIIIP 403
471|Sequence|2351|2360|VIPNLFPKYI
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 PNLFPKYI 10
P+ FPKYI
Sbjct: 154 PSSFPKYI 161
>sp|PORTL_HHV2H|PORTAL protein|Human herpesvirus 2 (strain HG52)
Query: 3 PNLFPKYI 10
P FPKYI
Sbjct: 154 PTSFPKYI 161
>sp|VP40_EBOZM|MATRIX protein VP40|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 VIPNLFPKYI 10
+IP L PKYI
Sbjct: 284 IIPVLLPKYI 293
>sp|VP40_EBOZ5|MATRIX protein VP40|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 VIPNLFPKYI 10
+IP L PKYI
Sbjct: 284 IIPVLLPKYI 293
>sp|VP40_EBOG4|MATRIX protein VP40|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 VIPNLFPKYI 10
+IP L PKYI
Sbjct: 284 IIPVLLPKYI 293
>sp|UL95_HHV6U|PROTEIN U67|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PNLFPKYI 10
PNL P Y+
Sbjct: 202 PNLLPPYL 209
>sp|UL95_HHV6Z|PROTEIN U67|Human herpesvirus 6B (strain Z29)
Query: 3 PNLFPKYI 10
PNL P Y+
Sbjct: 202 PNLLPPYL 209
>sp|UL95_HHV6H|PROTEIN U67|Human herpesvirus 6B (HHV-6 variant
Query: 3 PNLFPKYI 10
PNL P Y+
Sbjct: 202 PNLLPPYL 209
>sp|VP40_EBORE|MATRIX protein VP40|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 VIPNLFPKYI 10
+IP L PKY+
Sbjct: 284 IIPVLLPKYV 293
>sp|VP40_EBORR|MATRIX protein VP40|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 VIPNLFPKYI 10
+IP L PKY+
Sbjct: 284 IIPVLLPKYV 293
>sp|VP40_EBOSU|MATRIX protein VP40|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 VIPNLFPKYI 10
+IP L PKYI
Sbjct: 284 IIPVLLPKYI 293
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 3 PNLFPK 8
P LFPK
Sbjct: 340 PGLFPK 345
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 3 PNLFPK 8
P LFPK
Sbjct: 340 PGLFPK 345
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 3 PNLFPK 8
P LFPK
Sbjct: 340 PGLFPK 345
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 1 VIPNLFPKYI 10
+I L+P+YI
Sbjct: 1750 LIAALYPEYI 1759
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 1 VIPNLFPKYI 10
+I L+P+YI
Sbjct: 1749 LIAALYPEYI 1758
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 1 VIPNLFPKYI 10
+I L+P+YI
Sbjct: 1749 LIAALYPEYI 1758
>sp|A18_YMTV5|TRANSCRIPT termination protein A18|Yaba monkey tumor virus (strain
Query: 1 VIPNLFP 7
V+PNL+P
Sbjct: 76 VMPNLYP 82
>sp|NEF_HV1MV|PROTEIN Nef|Human immunodeficiency virus type 1
Query: 3 PNLFPK 8
P LFPK
Sbjct: 206 PELFPK 211
>sp|NEC1_HHV6Z|NUCLEAR egress protein 1|Human herpesvirus 6B (strain Z29)
Query: 4 NLFPKY 9
NLFP+Y
Sbjct: 46 NLFPEY 51
>sp|NEC1_HHV6U|NUCLEAR egress protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NLFPKY 9
NLFP+Y
Sbjct: 46 NLFPEY 51
>sp|NEC1_HHV6H|NUCLEAR egress protein 1|Human herpesvirus 6B (HHV-6 variant
Query: 4 NLFPKY 9
NLFP+Y
Sbjct: 46 NLFPEY 51
>sp|NS1_HBOC3|INITIATOR protein NS1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 2 IPNLFP 7
IPN FP
Sbjct: 582 IPNSFP 587
>sp|VE8E2_HPV04|PROTEIN E8^E2C|Human papillomavirus 4
Query: 4 NLFPK 8
NLFPK
Sbjct: 194 NLFPK 198
>sp|VE2_HPV65|REGULATORY protein E2|Human papillomavirus 65
Query: 4 NLFPK 8
NLFPK
Sbjct: 386 NLFPK 390
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 4 NLFPK 8
NLFPK
Sbjct: 386 NLFPK 390
>sp|RDRP_HPBVH|POTENTIAL RNA-dependent RNA polymerase|Human picobirnavirus (strain
Query: 1 VIPNLFPKY 9
V PN++ KY
Sbjct: 3 VAPNVWSKY 11
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 2 IPNLFP 7
IPN FP
Sbjct: 582 IPNSFP 587
>sp|L_UUKS|RNA-DIRECTED RNA polymerase L|Uukuniemi virus (strain S23) (UUKV)
Query: 4 NLFPKYI 10
N FP+++
Sbjct: 1614 NFFPRFV 1620
>sp|VE8E2_HPV65|PROTEIN E8^E2C|Human papillomavirus 65
Query: 4 NLFPK 8
NLFPK
Sbjct: 194 NLFPK 198
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 IPNLFPKY 9
IP PKY
Sbjct: 1202 IPTELPKY 1209
>sp|A18_YLDV|TRANSCRIPT termination protein A18|Yaba-like disease virus (YLDV)
Query: 1 VIPNLFP 7
++PNL+P
Sbjct: 77 ILPNLYP 83
>sp|NS1_HBOC2|INITIATOR protein NS1|Human bocavirus 2 (HBoV2) (Human
Query: 2 IPNLFP 7
+PN FP
Sbjct: 582 VPNSFP 587
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 IPNLFP 7
IPN FP
Sbjct: 2040 IPNHFP 2045
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 IPNLFP 7
IPN FP
Sbjct: 2040 IPNHFP 2045
>sp|NS1_HBOC4|INITIATOR protein NS1|Human bocavirus 4 (HBoV4) (Human
Query: 2 IPNLFP 7
+PN FP
Sbjct: 582 VPNSFP 587
>sp|VP6_ROTHL|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTH3|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTH7|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTH6|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHS|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTH1|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROT41|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHK|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHT|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTYO|INTERMEDIATE capsid protein VP6|Rotavirus A (strain
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHW|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHU|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTHP|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTAD|INTERMEDIATE capsid protein VP6|Rotavirus A (strain RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|VP6_ROTWI|INTERMEDIATE capsid protein VP6|Rotavirus A (isolate RVA/Human/United
Query: 3 PNLFP 7
PN+FP
Sbjct: 155 PNIFP 159
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LFPKYI 10
+FPKY+
Sbjct: 95 IFPKYL 100
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 5 LFPKYI 10
+FPKY+
Sbjct: 95 IFPKYL 100
472|Sequence|2356|2365|FPKYIRAPNG
>sp|ENV_HTLV2|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 2
Query: 1 FPKYIRAPN 9
FP +I+ PN
Sbjct: 81 FPHWIKKPN 89
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FPKYIRAPN 9
FP +I+ PN
Sbjct: 85 FPHWIKKPN 93
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FPKYIRAPN 9
FP +I+ PN
Sbjct: 85 FPHWIKKPN 93
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FPKYIRAPN 9
FP +I+ PN
Sbjct: 85 FPHWIKKPN 93
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FPKYIRAPN 9
FP +I+ PN
Sbjct: 85 FPHWIKKPN 93
>sp|VL2_HPV63|MINOR capsid protein L2|Human papillomavirus type 63
Query: 2 PKYIRAPNG 10
P Y RAP+G
Sbjct: 308 PTYSRAPDG 316
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FPKYIRAPN 9
FP +I+ PN
Sbjct: 85 FPHWIKKPN 93
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 3 KYIRAPN 9
K+IR PN
Sbjct: 333 KWIRLPN 339
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 KYIRAPN 9
K+IR PN
Sbjct: 333 KWIRLPN 339
>sp|SPIKE_CVH22|SPIKE glycoprotein|Human coronavirus 229E (HCoV-229E)
Query: 1 FPKYIRAPNG 10
PK+ A NG
Sbjct: 530 LPKFFYASNG 539
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 3 KYIRAPN 9
K+IR PN
Sbjct: 333 KWIRLPN 339
>sp|OBP_HHV7J|REPLICATION origin-binding protein|Human herpesvirus 7 (strain JI)
Query: 3 KYIRAPNG 10
K IRAP G
Sbjct: 48 KIIRAPMG 55
>sp|LF2_EBVB9|PROTEIN LF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FPKYIRAPN 9
FP Y+R N
Sbjct: 47 FPSYVRVTN 55
>sp|LF2_EBVA8|PROTEIN LF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FPKYIRAPN 9
FP Y+R N
Sbjct: 47 FPSYVRVTN 55
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 2 PKYIRAPNG 10
P Y++AP+G
Sbjct: 430 PIYVQAPHG 438
>sp|PRIM_VZVD|DNA primase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FPKYIRAPN 9
FPK + PN
Sbjct: 702 FPKAVVNPN 710
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 FPKYIRAPN 9
FP + +PN
Sbjct: 3122 FPSELESPN 3130
>sp|PRIM_VZVO|DNA primase|Varicella-zoster virus (strain Oka vaccine)
Query: 1 FPKYIRAPN 9
FPK + PN
Sbjct: 702 FPKAVVNPN 710
>sp|GP105_HHV6G|GLYCOPROTEIN 105|Human herpesvirus 6A (strain GS)
Query: 2 PKYIRAPNG 10
P+Y++ NG
Sbjct: 565 PRYLQMENG 573
>sp|ENV_HTL32|ENVELOPE glycoprotein gp63|Human T-cell leukemia virus 3
Query: 1 FPKYIRAPN 9
FP +I PN
Sbjct: 83 FPHWITKPN 91
>sp|MATRX_MUMP1|MATRIX protein|Mumps virus (strain SBL-1) (MuV)
Query: 3 KYIRAP 8
KY++AP
Sbjct: 154 KYVKAP 159
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PKYIRAPNG 10
P+Y++ NG
Sbjct: 565 PRYLQMENG 573
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 4 YIRAPNG 10
YIR P G
Sbjct: 182 YIRTPRG 188
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 PKYIRA 7
PK+IRA
Sbjct: 811 PKHIRA 816
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 PKYIRA 7
PK+IRA
Sbjct: 813 PKHIRA 818
>sp|ITP_EBVG|INNER tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PKYIRAP 8
P Y+R+P
Sbjct: 588 PAYVRSP 594
>sp|ITP_EBVA8|INNER tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 PKYIRAP 8
P Y+R+P
Sbjct: 592 PAYVRSP 598
>sp|LF2_EBVG|PROTEIN LF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FPKYIRAPN 9
FP Y+R N
Sbjct: 47 FPSYVRVTN 55
>sp|ENV_HTL1A|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 1 FPKYIRAPN 9
FP + + PN
Sbjct: 85 FPHWTKKPN 93
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 2 PKYIRA 7
PK+IRA
Sbjct: 813 PKHIRA 818
473|Sequence|2361|2370|RAPNGPEANP
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 2 APNGP 6
APNGP
Sbjct: 3517 APNGP 3521
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 2 APNGP 6
APNGP
Sbjct: 3517 APNGP 3521
>sp|VE2_HPV13|REGULATORY protein E2|Human papillomavirus 13
Query: 1 RAPNGPEANP 10
R P+ P NP
Sbjct: 244 RGPSRPIGNP 253
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2074 RSPNGAE 2080
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 RAPNGP 6
RAPNGP
Sbjct: 1249 RAPNGP 1254
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2074 RSPNGAE 2080
Query: 5 GPEAN 9
GPEAN
Sbjct: 2057 GPEAN 2061
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2074 RSPNGAE 2080
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 1 RAPNGP 6
R PNGP
Sbjct: 269 RLPNGP 274
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 1 RAPNGP 6
R PNGP
Sbjct: 269 RLPNGP 274
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2074 RSPNGAE 2080
Query: 5 GPEAN 9
GPEAN
Sbjct: 2057 GPEAN 2061
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2074 RSPNGAE 2080
Query: 5 GPEAN 9
GPEAN
Sbjct: 2057 GPEAN 2061
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2074 RSPNGAE 2080
Query: 5 GPEAN 9
GPEAN
Sbjct: 2057 GPEAN 2061
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 1 RAPNGP 6
R PNGP
Sbjct: 269 RLPNGP 274
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 1 RAPNGPE 7
R+PNG E
Sbjct: 2075 RSPNGAE 2081
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 1 RAPNGP 6
R PNGP
Sbjct: 269 RLPNGP 274
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 1 RAPNGP 6
R PNGP
Sbjct: 269 RLPNGP 274
>sp|PA_I07A0|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Texas/UR06-0195/2007
Query: 1 RAPNGP 6
R PNGP
Sbjct: 269 RLPNGP 274
>sp|E1B55_ADE41|E1B 55 kDa protein|Human adenovirus F serotype 41
Query: 4 NGPEANP 10
NGP NP
Sbjct: 18 NGPVENP 24
>sp|R1A_CVHNL|REPLICASE polyprotein 1a|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PNGPE 7
PNGP+
Sbjct: 3875 PNGPQ 3879
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 3 PNGPE 7
PNGP+
Sbjct: 3875 PNGPQ 3879
>sp|PRIM_HHV2H|DNA primase|Human herpesvirus 2 (strain HG52)
Query: 2 APNGPEANP 10
APNGP P
Sbjct: 59 APNGPTGAP 67
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 2 APNGPEANP 10
AP GP+ NP
Sbjct: 79 APLGPDLNP 87
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 2 APNGPEAN 9
APNG + N
Sbjct: 290 APNGKKKN 297
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 RAPNGPEANP 10
R N P +NP
Sbjct: 1207 RLDNDPASNP 1216
>sp|HEPA_VZVD|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 GPEANP 10
GPE NP
Sbjct: 305 GPELNP 310
>sp|HEPA_VZVO|DNA helicase/primase complex-associated protein|Varicella-zoster virus
Query: 5 GPEANP 10
GPE NP
Sbjct: 305 GPELNP 310
>sp|UL27_HCMVM|PROTEIN UL27|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RAPNGPEA 8
RAP PEA
Sbjct: 512 RAPPTPEA 519
>sp|NRAM_I68A5|NEURAMINIDASE A virus (strain A/Korea/426/1968
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RNPNNERGNP 347
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 RAPNGP 6
RAP GP
Sbjct: 144 RAPGGP 149
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 RAPNGP 6
RAP GP
Sbjct: 144 RAPGGP 149
>sp|SPIKE_ADE05|FIBER protein|Human adenovirus C serotype 5
Query: 2 APNGPEANP 10
+PN P NP
Sbjct: 348 SPNAPNTNP 356
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 RAPNGP 6
RAP GP
Sbjct: 144 RAPGGP 149
>sp|NRAM_I57A0|NEURAMINIDASE A virus (strain A/Japan/305/1957
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RDPNNERGNP 347
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 RAPNGP 6
RAP GP
Sbjct: 137 RAPGGP 142
>sp|NRAM_I57A5|NEURAMINIDASE A virus (strain A/Singapore/1/1957
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RDPNNERGNP 347
>sp|NRAM_I57A2|NEURAMINIDASE A virus (strain A/Leningrad/134/17/1957
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RDPNNERGNP 347
>sp|NRAM_I60A0|NEURAMINIDASE A virus (strain A/Ann
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RDPNNERGNP 347
>sp|NRAM_I57A4|NEURAMINIDASE A virus (strain A/RI/5-/1957
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RDPNNERGNP 347
>sp|NRAM_I57A1|NEURAMINIDASE A virus (strain A/Leningrad/134/1957
Query: 1 RAPNGPEANP 10
R PN NP
Sbjct: 338 RDPNNERGNP 347
>sp|PA_I93A0|POLYMERASE acidic protein|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 RAPNGP 6
+ PNGP
Sbjct: 269 KLPNGP 274
>sp|VE8E2_HPV13|PROTEIN E8^E2C|Human papillomavirus 13
Query: 1 RAPNGPEANP 10
R P+ P NP
Sbjct: 54 RGPSRPIGNP 63
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 RAPNGP 6
RAP+GP
Sbjct: 6 RAPSGP 11
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RAPNGP 6
RAP+GP
Sbjct: 6 RAPSGP 11
>sp|TRM2_HHV2H|TRIPARTITE terminase subunit 2|Human herpesvirus 2 (strain HG52)
Query: 1 RAPNGPEA 8
+AP+GP A
Sbjct: 86 KAPDGPAA 93
474|Sequence|2366|2375|PEANPVKQLQ
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 1 PEANPV 6
PE NP+
Sbjct: 112 PEVNPI 117
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 4 NPVKQLQ 10
+PVKQL+
Sbjct: 303 DPVKQLR 309
>sp|U20_HHV6U|GLYCOPROTEIN U20|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 NPVKQ 8
NPVKQ
Sbjct: 295 NPVKQ 299
>sp|HEMA_INCGL|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Great
Query: 2 EANPVKQL 9
E NP KQ+
Sbjct: 189 EVNPSKQI 196
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 PEANPVKQ 8
PEA+P+ +
Sbjct: 2254 PEADPITE 2261
475|Sequence|2371|2380|VKQLQPNEEA
>sp|PG081_VARV|PROTEIN OPG081|Variola virus
Query: 1 VKQLQPNE 8
VK+L PN+
Sbjct: 29 VKELNPND 36
>sp|PG081_VAR67|PROTEIN OPG081|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 VKQLQPNE 8
VK+L PN+
Sbjct: 29 VKELNPND 36
>sp|PG081_VACCC|PROTEIN OPG081|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VKQLQPNE 8
VK+L PN+
Sbjct: 29 VKELNPND 36
>sp|PG081_MONPV|PROTEIN OPG081|Monkeypox virus (MPXV)
Query: 1 VKQLQPNE 8
VK+L PN+
Sbjct: 29 VKELNPND 36
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 VKQLQPNE 8
+KQL+P E
Sbjct: 1340 IKQLKPAE 1347
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 VKQLQPNE 8
+KQL+P E
Sbjct: 1340 IKQLKPAE 1347
>sp|CAPSD_TTVV3|CAPSID protein|Torque teno virus (isolate Human/Finland/Hel32/2002)
Query: 1 VKQLQPN 7
+KQ QPN
Sbjct: 71 IKQWQPN 77
>sp|LTP_HHV7J|LARGE tegument protein deneddylase|Human herpesvirus 7 (strain JI)
Query: 1 VKQLQPNEEA 10
+KQ+ PN A
Sbjct: 1335 IKQIDPNRIA 1344
>sp|POL_HV1ET|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 VKQLQP 6
+KQLQP
Sbjct: 61 IKQLQP 66
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 KQLQPNEEA 10
KQ+ PN+ A
Sbjct: 30 KQVTPNDHA 38
>sp|NCAP_DUVV|NUCLEOPROTEIN virus (DUVV)
Query: 2 KQLQPNEEA 10
K+LQ EEA
Sbjct: 364 KELQDYEEA 372
>sp|GAG_HV1ET|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 VKQLQP 6
+KQLQP
Sbjct: 61 IKQLQP 66
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 KQLQPNEEA 10
KQ+ PN+ A
Sbjct: 30 KQVTPNDHA 38
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 KQLQPNEEA 10
KQ+ PN+ A
Sbjct: 30 KQVTPNDHA 38
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 KQLQPNEEA 10
++LQ N+EA
Sbjct: 72 QELQANKEA 80
476|Sequence|2376|2385|PNEEADYLGV
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 2 NEEADY--LGV 10
NEEADY LG+
Sbjct: 265 NEEADYPPLGI 275
>sp|SHUT_ADE41|SHUTOFF protein|Human adenovirus F serotype 41
Query: 1 PNEEADYLG 9
P EADYLG
Sbjct: 57 PLTEADYLG 65
>sp|MCE_VACCC|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 PNEEADYL 8
PN+E DY
Sbjct: 254 PNQEYDYF 261
>sp|MCE_VACCA|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Vaccinia virus (strain
Query: 1 PNEEADYL 8
PN+E DY
Sbjct: 254 PNQEYDYF 261
>sp|MCE_MONPV|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Monkeypox virus (MPXV)
Query: 1 PNEEADYL 8
PN+E DY
Sbjct: 254 PNQEYDYF 261
>sp|MCE_VAR67|CAP-SPECIFIC mRNA (nucleoside-2'-O-)-methyltransferase|Variola virus (isolate
Query: 1 PNEEADYL 8
PN+E DY
Sbjct: 254 PNQEYDYF 261
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 1 PNEEADY 7
PN E DY
Sbjct: 1598 PNNEDDY 1604
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PNEEADYL 8
PN+ +YL
Sbjct: 2625 PNQRVEYL 2632
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 PNEEADYL 8
PN+ +YL
Sbjct: 2624 PNQRVEYL 2631
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 2 NEEADYLGV 10
N E DY G+
Sbjct: 149 NGEVDYKGI 157
>sp|TYSY_HHV8P|THYMIDYLATE synthase|Human herpesvirus 8 type P
Query: 1 PNEEADYL 8
P+EE YL
Sbjct: 51 PHEELQYL 58
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 1 PNEEAD 6
P EEAD
Sbjct: 2376 PREEAD 2381
>sp|UL31_HCMVA|PROTEIN UL31|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 PNEEADYLGV 10
P+E+A Y G+
Sbjct: 507 PHEDAFYTGL 516
>sp|UL31_HCMVM|PROTEIN UL31|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 PNEEADYLGV 10
P+E+A Y G+
Sbjct: 507 PHEDAFYTGL 516
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 4 EADYLG 9
EAD+LG
Sbjct: 87 EADWLG 92
477|Sequence|2381|2390|DYLGVRIQLR
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 DYLGVRIQ 8
+YLGVR +
Sbjct: 1187 EYLGVRYE 1194
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 DYLGVRIQLR 10
D+L +R Q+R
Sbjct: 780 DWLAMRKQIR 789
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 DYLGVRIQLR 10
D+L +R Q+R
Sbjct: 785 DWLAMRKQIR 794
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 DYLGVRIQLR 10
D+L +R Q+R
Sbjct: 785 DWLAMRKQIR 794
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 DYLGVRIQLR 10
D+L +R Q+R
Sbjct: 780 DWLAMRKQIR 789
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 DYLGVRIQLR 10
D+L +R Q+R
Sbjct: 780 DWLAMRKQIR 789
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 DYLGVRIQLR 10
D+L +R Q+R
Sbjct: 780 DWLAMRKQIR 789
478|Sequence|2386|2395|RIQLRREQGA
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 5 RREQGA 10
RRE+GA
Sbjct: 2288 RREEGA 2293
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 5 RREQGA 10
RRE+GA
Sbjct: 2288 RREEGA 2293
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 5 RREQGA 10
RRE+GA
Sbjct: 2284 RREEGA 2289
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 IQLRREQG 9
IQLR QG
Sbjct: 773 IQLRPRQG 780
>sp|UL87_EBVB9|LATE gene expression regulator BcRF1|Epstein-Barr virus (strain B95-8)
Query: 4 LRREQGA 10
LRRE GA
Sbjct: 182 LRREDGA 188
479|Sequence|2391|2400|REQGAGATGF
>sp|TRM3_VZVD|TRIPARTITE terminase subunit 3|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 REQGAGATGF 10
R+Q +G GF
Sbjct: 476 RKQNSGGVGF 485
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 AGATGF 10
AGATGF
Sbjct: 1828 AGATGF 1833
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 AGATGF 10
AGATGF
Sbjct: 1828 AGATGF 1833
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 AGATGF 10
AGATGF
Sbjct: 1828 AGATGF 1833
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 4 GAGATGF 10
AGATGF
Sbjct: 1827 AAGATGF 1833
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 AGATGF 10
AGATGF
Sbjct: 1828 AGATGF 1833
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 AGATGF 10
AGATGF
Sbjct: 1828 AGATGF 1833
>sp|VE1_HPV26|REPLICATION protein E1|Human papillomavirus type 26
Query: 2 EQGAGATGF 10
E+G G TG+
Sbjct: 8 EEGRGCTGW 16
>sp|VE1_HPV58|REPLICATION protein E1|Human papillomavirus 58
Query: 4 GAGATGF 10
GAG TG+
Sbjct: 11 GAGCTGW 17
>sp|VE1_HPV30|REPLICATION protein E1|Human papillomavirus 30
Query: 2 EQGAGATGF 10
++G G TG+
Sbjct: 9 DEGGGCTGW 17
>sp|VE1_HPV6B|REPLICATION protein E1|Human papillomavirus type 6b
Query: 3 QGAGATGF 10
+G+G TG+
Sbjct: 10 EGSGCTGW 17
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 3 QGAGATGF 10
+G+G TG+
Sbjct: 10 EGSGCTGW 17
480|Sequence|2396|2405|GATGFLEWWV
>sp|RIR1_HHV8P|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 8 type P
Query: 1 GATGFLEWW 9
GA+ ++E W
Sbjct: 283 GASAYMELW 291
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 GFLEW--WV 10
GF EW WV
Sbjct: 740 GFAEWFHWV 748
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TGFLEW 8
TG +EW
Sbjct: 2077 TGMIEW 2082
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TGFLEW 8
TG +EW
Sbjct: 2077 TGMIEW 2082
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TGFLEW 8
TG +EW
Sbjct: 2077 TGMIEW 2082
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 3 TGFLEW 8
TG +EW
Sbjct: 2077 TGIIEW 2082
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 TGFLEWW 9
T F+E W
Sbjct: 1414 TAFMELW 1420
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 4 GFLEW 8
GF EW
Sbjct: 577 GFYEW 581
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 4 GFLEW 8
GF EW
Sbjct: 577 GFYEW 581
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GFLEW 8
GF EW
Sbjct: 577 GFYEW 581
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 4 GFLEW 8
GF EW
Sbjct: 577 GFYEW 581
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 GATGFLEWWV 10
G GF W++
Sbjct: 1524 GYIGFKNWFI 1533
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 TGFLEWWV 10
+GF E W+
Sbjct: 2216 SGFKEIWI 2223
Query: 1 GATGFLEW 8
G GF W
Sbjct: 747 GLPGFFNW 754
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 GATGFLEWWV 10
G GF W+
Sbjct: 962 GTAGFCRLWI 971
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 GATGFLEWWV 10
G GF W+
Sbjct: 962 GTAGFCRLWI 971
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 GATGFLEWWV 10
G GF W+
Sbjct: 962 GTAGFCRLWI 971
>sp|US03_HHV2H|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 2 (strain HG52)
Query: 1 GATGF 5
GATGF
Sbjct: 152 GATGF 156
>sp|US03_HHV11|SERINE/THREONINE-PROTEIN kinase US3|Human herpesvirus 1 (strain 17)
Query: 1 GATGF 5
GATGF
Sbjct: 152 GATGF 156
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 1 GATGFLEW 8
G GF W
Sbjct: 747 GLPGFFNW 754
481|Sequence|2401|2410|LEWWVIELQE
>sp|VL1_HPV60|MAJOR capsid protein L1|Human papillomavirus type 60
Query: 3 WWVIELQE 10
+W I+LQE
Sbjct: 455 FWTIDLQE 462
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 WVIELQE 10
W I LQE
Sbjct: 664 WAINLQE 670
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 EWWV 5
EWWV
Sbjct: 657 EWWV 660
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 EWWV 5
EWWV
Sbjct: 657 EWWV 660
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 2 EWWVIEL 8
EW+ +EL
Sbjct: 182 EWFAVEL 188
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 2 EWWVIEL 8
EW+ +EL
Sbjct: 182 EWFAVEL 188
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LEWWVIEL 8
LE+WV L
Sbjct: 262 LEYWVTPL 269
>sp|SPIKE_CVHN5|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N5)
Query: 1 LEWWVIEL 8
LE+WV L
Sbjct: 254 LEYWVTPL 261
>sp|SPIKE_CVHN2|SPIKE glycoprotein|Human coronavirus HKU1 (isolate N2)
Query: 1 LEWWVIEL 8
LE+WV L
Sbjct: 254 LEYWVTPL 261
>sp|CAPSD_HASV4|CAPSID polyprotein VP90|Human astrovirus-4 (HAstV-4)
Query: 1 LEWWVIELQE 10
LEW LQE
Sbjct: 487 LEWLTPNLQE 496
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 LEWWVIEL 8
++WW+ L
Sbjct: 1060 IDWWIQTL 1067
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 5 VIELQE 10
VIELQE
Sbjct: 224 VIELQE 229
>sp|POLG_HPE1H|GENOME polyprotein|Human parechovirus 1 (strain Harris)
Query: 1 LEWWV 5
++WW+
Sbjct: 1061 IDWWI 1065
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 LEWWV 5
+EWW+
Sbjct: 1108 VEWWL 1112
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 LEWWV 5
++WW+
Sbjct: 1069 VDWWI 1073
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 2 EWW 4
EWW
Sbjct: 1016 EWW 1018
482|Sequence|2406|2415|IELQECRTDC
>sp|U15_HHV6Z|PROTEIN U15|Human herpesvirus 6B (strain Z29)
Query: 3 LQECRTDC 10
LQECR C
Sbjct: 9 LQECRELC 16
>sp|U15_HHV6U|UNCHARACTERIZED protein U15|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 LQECRTDC 10
LQECR C
Sbjct: 9 LQECRELC 16
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 2 ELQECR 7
ELQEC+
Sbjct: 192 ELQECK 197
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 2 ELQECR 7
ELQEC+
Sbjct: 192 ELQECK 197
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 2 ELQECR 7
ELQEC+
Sbjct: 192 ELQECK 197
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 6 CRTDC 10
CR DC
Sbjct: 170 CRADC 174
>sp|HEMA_I36A0|HEMAGGLUTININ A virus (strain A/Henry/1936
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MHECNTKC 296
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 288 MHECNTKC 295
>sp|HEMA_I35A3|HEMAGGLUTININ A virus (strain A/USA:Phila/1935
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MHECNTKC 296
>sp|HEMA_I34A1|HEMAGGLUTININ A virus (strain A/Puerto
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 288 MHECNTKC 295
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 QECRTDC 10
Q C TDC
Sbjct: 577 QFCPTDC 583
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CRTDC 10
CRT C
Sbjct: 1306 CRTSC 1310
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CRTDC 10
CRT C
Sbjct: 1306 CRTSC 1310
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CRTDC 10
CRT C
Sbjct: 1306 CRTSC 1310
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CRTDC 10
CRT C
Sbjct: 1306 CRTSC 1310
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 6 CRTDC 10
CRT C
Sbjct: 1306 CRTSC 1310
>sp|UL87_HHV6Z|PROTEIN U58|Human herpesvirus 6B (strain Z29)
Query: 1 IELQECRTD 9
IE+++C D
Sbjct: 204 IEIEQCTND 212
>sp|HEMA_I43A0|HEMAGGLUTININ A virus (strain A/USA:Iowa/1943
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 288 MHECDTKC 295
>sp|UL87_HHV6U|PROTEIN U58|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 IELQECRTD 9
IE+++C D
Sbjct: 204 IEIEQCTND 212
>sp|HEMA_I45A0|HEMAGGLUTININ A virus (strain A/USA:Huston/AA/1945
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MHECDTKC 296
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I56A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/Prague/1/1956
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 191 ELQDCK 196
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 186 ELQDCK 191
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 184 ELQDCK 189
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 185 ELQDCK 190
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|DUT_YMTV5|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Yaba monkey tumor virus (strain
Query: 6 CRTDC 10
CR DC
Sbjct: 132 CRGDC 136
>sp|HEMA_I68A5|HEMAGGLUTININ A virus (strain A/Korea/426/1968
Query: 3 LQECRTDC 10
L+ C T C
Sbjct: 285 LENCETKC 292
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 6 CRTDC 10
CRT C
Sbjct: 2027 CRTTC 2031
>sp|ALT2B_ENMGO|PROTEIN 2B*|Mengo encephalomyocarditis virus
Query: 4 QECRTDC 10
Q C TDC
Sbjct: 86 QMCATDC 92
>sp|HEMA_I57A5|HEMAGGLUTININ A virus (strain A/Singapore/1/1957
Query: 3 LQECRTDC 10
L+ C T C
Sbjct: 285 LENCETKC 292
>sp|HEMA_I60A0|HEMAGGLUTININ A virus (strain A/Ann
Query: 3 LQECRTDC 10
L+ C T C
Sbjct: 285 LENCETKC 292
>sp|HEMA_I57A0|HEMAGGLUTININ A virus (strain A/Japan/305/1957
Query: 3 LQECRTDC 10
L+ C T C
Sbjct: 285 LENCETKC 292
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|HEMA_I78A3|HEMAGGLUTININ A virus (strain A/Mallard/New
Query: 3 LQECRTDC 10
L+ C T C
Sbjct: 285 LENCETKC 292
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|HEMA_I77AB|HEMAGGLUTININ A virus (strain A/USSR/90/1977
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|HEMA_I77AA|HEMAGGLUTININ A virus (strain A/Brazil/11/1978
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|HEMA_I40A0|HEMAGGLUTININ A virus (strain A/Hickox/1940
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 2 ELQECR 7
ELQ+C+
Sbjct: 192 ELQDCK 197
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 3 LQECRTDC 10
LQ C +C
Sbjct: 1819 LQNCTAEC 1826
>sp|HEMA_I54A2|HEMAGGLUTININ A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|HEMA_I54A0|HEMAGGLUTININ A virus (strain A/Leningrad/1/1954
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|HEMA_I51A0|HEMAGGLUTININ A virus (strain A/USA:Albany/12/1951
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 IELQECRTD 9
+EL+ CR +
Sbjct: 83 LELRPCRAE 91
Query: 3 LQECRTDC 10
L EC T C
Sbjct: 977 LVECETVC 984
>sp|HEMA_I79A4|HEMAGGLUTININ A virus (strain A/Kiev/59/1979
Query: 3 LQECRTDC 10
+ EC T C
Sbjct: 289 MDECDTKC 296
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 3 LQECRTDC 10
L EC T C
Sbjct: 1048 LVECETVC 1055
483|Sequence|2411|2420|CRTDCNLLPM
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 3 TDCNLLPM 10
TDC ++PM
Sbjct: 1367 TDCCVIPM 1374
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 3 TDCNLLPM 10
TDC ++PM
Sbjct: 1367 TDCCVIPM 1374
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 TDCNLLPM 10
TDC ++PM
Sbjct: 1367 TDCCVIPM 1374
>sp|ICP27_EBVB9|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain B95-8)
Query: 3 TDCNLLPM 10
TDC+L PM
Sbjct: 35 TDCDLDPM 42
>sp|PG061_MONPV|PROTEIN OPG061|Monkeypox virus (MPXV)
Query: 1 CRTDCNLLPM 10
CR CN L M
Sbjct: 24 CRHHCNYLSM 33
>sp|PG061_VARV|PROTEIN OPG061|Variola virus
Query: 1 CRTDCNLLPM 10
CR CN L M
Sbjct: 24 CRHHCNYLSM 33
>sp|PG061_VAR67|PROTEIN OPG061|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CRTDCNLLPM 10
CR CN L M
Sbjct: 24 CRHHCNYLSM 33
>sp|PG061_VACCC|PROTEIN OPG061|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CRTDCNLLPM 10
CR CN L M
Sbjct: 24 CRHHCNYLSM 33
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 RTDCNLLPM 10
R+D N++P+
Sbjct: 1129 RSDANIIPI 1137
>sp|ICP27_EBVG|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain GD1)
Query: 3 TDCNLLPM 10
TDC++ PM
Sbjct: 35 TDCDMDPM 42
>sp|ICP27_EBVA8|MRNA export factor ICP27 homolog|Epstein-Barr virus (strain AG876)
Query: 3 TDCNLLPM 10
TDC++ PM
Sbjct: 35 TDCDMDPM 42
>sp|UL95_HHV8P|PROTEIN UL95 homolog|Human herpesvirus 8 type P
Query: 1 CRTDCNL 7
CR DC L
Sbjct: 170 CRADCCL 176
>sp|3BHS_VAR67|3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase|Variola
Query: 1 CRTDCNLLP 9
CRT LLP
Sbjct: 200 CRTRFQLLP 208
>sp|DUT_YMTV5|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Yaba monkey tumor virus (strain
Query: 1 CRTDC 5
CR DC
Sbjct: 132 CRGDC 136
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 5 CNLLP 9
CNL+P
Sbjct: 1134 CNLIP 1138
>sp|ENV_SFV3L|ENVELOPE glycoprotein gp130|Simian foamy virus type 3
Query: 2 RTDCNL 7
RTDC++
Sbjct: 811 RTDCSI 816
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 CRTDCNLLP 9
CRT L P
Sbjct: 374 CRTTAPLFP 382
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 CRTDCNLLP 9
CRT L P
Sbjct: 374 CRTTAPLFP 382
>sp|HEMA_CVHN5|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N5)
Query: 2 RTDCN 6
R+DCN
Sbjct: 35 RSDCN 39
>sp|HEMA_CVHN2|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N2)
Query: 2 RTDCN 6
R+DCN
Sbjct: 35 RSDCN 39
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 3 TDCNLL 8
TDC LL
Sbjct: 1461 TDCRLL 1466
>sp|PA_INCJJ|POLYMERASE acidic protein|Influenza C virus (strain C/JJ/1950)
Query: 3 TDCNLLP 9
T+C L P
Sbjct: 447 TECRLFP 453
>sp|PA_INCAA|POLYMERASE acidic protein|Influenza C virus (strain C/Ann
Query: 3 TDCNLLP 9
T+C L P
Sbjct: 447 TECRLFP 453
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6398 CITRCNL 6404
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6367 CITRCNL 6373
>sp|PA_INCJH|POLYMERASE acidic protein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 3 TDCNLLP 9
T+C L P
Sbjct: 447 TECRLFP 453
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6378 CITACNL 6384
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 RTDCN 6
R+DCN
Sbjct: 1048 RSDCN 1052
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6375 CITRCNL 6381
>sp|HEMA_CVHN1|HEMAGGLUTININ-ESTERASE coronavirus HKU1 (isolate N1)
Query: 2 RTDCN 6
R+DCN
Sbjct: 35 RSDCN 39
>sp|HEMA_CVHOC|HEMAGGLUTININ-ESTERASE coronavirus OC43 (HCoV-OC43)
Query: 2 RTDCN 6
R+DCN
Sbjct: 41 RSDCN 45
>sp|VP5_CTFVL|UNCHARACTERIZED protein VP5|Colorado tick fever virus (strain
Query: 3 TDCNL 7
TDCNL
Sbjct: 361 TDCNL 365
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6405 CITRCNL 6411
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6425 CITRCNL 6431
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 CRTDCNL 7
C T CNL
Sbjct: 6455 CITRCNL 6461
484|Sequence|2416|2425|NLLPMVIFSD
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 2 LLPMVIFSD 10
LLP +FSD
Sbjct: 3520 LLPQSVFSD 3528
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LLPMVIFSD 10
+LP+ FSD
Sbjct: 2119 MLPLAYFSD 2127
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 LLPMVIFSD 10
+LP+ FSD
Sbjct: 2119 MLPLAYFSD 2127
>sp|UL04_HCMVA|EARLY glycoprotein GP48|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLPMVIFS 9
LLPMV+ +
Sbjct: 10 LLPMVLLA 17
>sp|PP65_HCMVT|65 kDa phosphoprotein|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 1 NLLPMV 6
NL+PMV
Sbjct: 485 NLVPMV 490
>sp|PP65_HCMVM|65 kDa phosphoprotein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NLLPMV 6
NL+PMV
Sbjct: 495 NLVPMV 500
>sp|PP65_HCMVA|65 kDa phosphoprotein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NLLPMV 6
NL+PMV
Sbjct: 495 NLVPMV 500
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 4 PMVIFSD 10
P+V+F+D
Sbjct: 1482 PIVLFTD 1488
>sp|L_HRSVA|RNA-DIRECTED RNA polymerase L|Human respiratory syncytial virus A
Query: 1 NLLPMVI 7
NL PMV+
Sbjct: 1769 NLFPMVV 1775
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 4 PMVIFSD 10
P+V+F+D
Sbjct: 1482 PIVLFTD 1488
>sp|TAX_HTL1L|PROTEIN Tax-1|Human T-cell leukemia virus 1
Query: 2 LLPMVIF 8
LLP VIF
Sbjct: 166 LLPQVIF 172
>sp|UL49_HHV6U|PROTEIN U33|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 NLLPMV 6
NL+PMV
Sbjct: 242 NLVPMV 247
>sp|UL49_HHV6Z|PROTEIN U33|Human herpesvirus 6B (strain Z29)
Query: 1 NLLPMV 6
NL+PMV
Sbjct: 242 NLVPMV 247
485|Sequence|2421|2430|VIFSDKVSPP
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 FSDKVSPP 10
FSD SPP
Sbjct: 1211 FSDNTSPP 1218
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1214 VFTDNSSPP 1222
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 IFSDKVSPP 10
+F+D SPP
Sbjct: 1209 VFTDNSSPP 1217
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1212 FSDNTTPP 1219
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 IFSDKVSPP 10
+F+D +PP
Sbjct: 1207 VFTDNSTPP 1215
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 3 FSDKVSPP 10
F+D SPP
Sbjct: 1214 FTDNSSPP 1221
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1216 FSDNSTPP 1223
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IFSDKVSPP 10
+F+D +PP
Sbjct: 1210 VFTDNSTPP 1218
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1218 FSDNSTPP 1225
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1216 FSDNSTPP 1223
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1215 FSDNSTPP 1222
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1214 FSDNSTPP 1221
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1214 FSDNSTPP 1221
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1214 FSDNSTPP 1221
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 IFSDKVSPP 10
+F+D +PP
Sbjct: 1210 VFTDNSTPP 1218
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 2 IFSDKVSPP 10
+F+D +PP
Sbjct: 1209 VFTDNSTPP 1217
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 FSDKVSPP 10
FSD +PP
Sbjct: 1214 FSDNSTPP 1221
>sp|HEPA_HCMVM|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 SDKVSP 9
SD+VSP
Sbjct: 655 SDRVSP 660
>sp|HEPA_HCMVA|DNA helicase/primase complex-associated protein|Human cytomegalovirus
Query: 4 SDKVSP 9
SD+VSP
Sbjct: 655 SDRVSP 660
>sp|POLG_LJUV1|GENOME polyprotein|Ljunganvirus 1 (LV) (Ljungan virus
Query: 1 VIFSDKVSPP 10
V SDK PP
Sbjct: 2145 VTSSDKSGPP 2154
486|Sequence|2426|2435|KVSPPSLGFL
>sp|NPH2_VACCT|RNA helicase NPH-II|Vaccinia virus (strain Tian Tan)
Query: 1 KVSPPSLG 8
KVSPPSLG
Sbjct: 72 KVSPPSLG 79
>sp|NPH2_VACCC|RNA helicase NPH-II|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 KVSPPSLG 8
KVSPPSLG
Sbjct: 72 KVSPPSLG 79
>sp|NPH2_VACCA|RNA helicase NPH-II|Vaccinia virus (strain Ankara) (VACV)
Query: 1 KVSPPSLG 8
KVSPPSLG
Sbjct: 72 KVSPPSLG 79
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 1 KVSPPSLG 8
KVSPPSLG
Sbjct: 72 KVSPPSLG 79
>sp|NPH2_VARV|RNA helicase NPH-II|Variola virus
Query: 1 KVSPPSLG 8
KVSPPSLG
Sbjct: 72 KVSPPSLG 79
>sp|NPH2_VAR67|RNA helicase NPH-II|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 KVSPPSLG 8
KVSPPSLG
Sbjct: 72 KVSPPSLG 79
>sp|VPAP_HHV7J|DNA polymerase processivity factor|Human herpesvirus 7 (strain JI)
Query: 1 KVSPPSLGFL 10
+V+PPS+ FL
Sbjct: 196 QVNPPSIKFL 205
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 VSPPSLGFL 10
V PPSL L
Sbjct: 724 VKPPSLALL 732
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 VSPPSLGFL 10
V PPSL L
Sbjct: 724 VKPPSLALL 732
>sp|PG115_VACCT|CORE protein OPG115|Vaccinia virus (strain Tian Tan)
Query: 4 PPSLG 8
PPSLG
Sbjct: 130 PPSLG 134
>sp|PG115_VACCC|CORE protein OPG115|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 PPSLG 8
PPSLG
Sbjct: 130 PPSLG 134
>sp|PG115_VACCA|CORE protein OPG115|Vaccinia virus (strain Ankara) (VACV)
Query: 4 PPSLG 8
PPSLG
Sbjct: 126 PPSLG 130
>sp|PG115_MONPV|CORE protein OPG115|Monkeypox virus (MPXV)
Query: 4 PPSLG 8
PPSLG
Sbjct: 126 PPSLG 130
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 4 PPSLGFL 10
PP+ GFL
Sbjct: 402 PPTCGFL 408
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 3 SPPSLGF 9
+PP++G+
Sbjct: 424 APPNIGY 430
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 SPPSLGF 9
+PP++G+
Sbjct: 424 APPNIGY 430
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 SPPSLGF 9
+PP++G+
Sbjct: 424 APPNIGY 430
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 3 SPPSLGF 9
+PP++G+
Sbjct: 424 APPNIGY 430
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 PPSLGFL 10
PP+ GFL
Sbjct: 402 PPTCGFL 408
>sp|SPI2_CWPXB|SERINE proteinase inhibitor 2|Cowpox virus (strain Brighton Red)
Query: 2 VSPPSL 7
+SPPS+
Sbjct: 18 ISPPSI 23
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 KVSPP 5
KVSPP
Sbjct: 154 KVSPP 158
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 1 KVSPP 5
KVSPP
Sbjct: 154 KVSPP 158
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 PPSLGFL 10
PPS G+L
Sbjct: 885 PPSQGYL 891
487|Sequence|2431|2440|SLGFLAGYGI
>sp|BILF2_EBVB9|GLYCOPROTEIN BILF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 LGFLAGYG 9
LG+LAG+G
Sbjct: 232 LGWLAGWG 239
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 FLAGYG 9
F+AGYG
Sbjct: 2970 FVAGYG 2975
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LGFLAGYG 9
L LAGYG
Sbjct: 1855 LDILAGYG 1862
>sp|FUS_HRSVR|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 LGFLAGYG 9
LGFL G G
Sbjct: 138 LGFLLGVG 145
>sp|FUS_HRSVB|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 LGFLAGYG 9
LGFL G G
Sbjct: 138 LGFLLGVG 145
>sp|FUS_HRSVA|FUSION glycoprotein F0|Human respiratory syncytial virus A
Query: 2 LGFLAGYG 9
LGFL G G
Sbjct: 138 LGFLLGVG 145
>sp|FUS_HRSV1|FUSION glycoprotein F0|Human respiratory syncytial virus B
Query: 2 LGFLAGYG 9
LGFL G G
Sbjct: 138 LGFLLGVG 145
>sp|FUS_HRSV|FUSION glycoprotein F0|Human respiratory syncytial virus
Query: 2 LGFLAGYG 9
LGFL G G
Sbjct: 138 LGFLLGVG 145
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 LGFLAGYGI 10
LG++AG G+
Sbjct: 953 LGWIAGSGV 961
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 LGFLAGYG 9
L LAGYG
Sbjct: 1855 LDILAGYG 1862
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 LGFLAGYG 9
L LAGYG
Sbjct: 1857 LDVLAGYG 1864
>sp|SPIKE_SARS2|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LGFLAG 7
LGF+AG
Sbjct: 1218 LGFIAG 1223
>sp|SPIKE_SARS|SPIKE glycoprotein|Severe acute respiratory syndrome coronavirus
Query: 2 LGFLAG 7
LGF+AG
Sbjct: 1200 LGFIAG 1205
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 3 GFLAGY 8
GF AGY
Sbjct: 442 GFAAGY 447
>sp|VP4_ROTGA|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 3 GFLAGY 8
GF AGY
Sbjct: 441 GFAAGY 446
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 2 LGFLAG 7
LGF+AG
Sbjct: 1301 LGFIAG 1306
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 5 LAGYG 9
LAGYG
Sbjct: 1857 LAGYG 1861
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 5 LAGYG 9
LAGYG
Sbjct: 1853 LAGYG 1857
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 LGFLAGYG 9
+ LAGYG
Sbjct: 1847 IDILAGYG 1854
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 LGFLAGYG 9
+ LAGYG
Sbjct: 1850 IDILAGYG 1857
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 5 LAGYG 9
LAGYG
Sbjct: 1856 LAGYG 1860
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SLGFLAGYGI 10
SLG+ YGI
Sbjct: 300 SLGYSLLYGI 309
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SLGFLAGYGI 10
SLG+ YGI
Sbjct: 300 SLGYSLLYGI 309
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SLGFLAGYGI 10
SLG+ YGI
Sbjct: 300 SLGYSLLYGI 309
488|Sequence|2436|2445|AGYGIMGLYV
>sp|VP4_ROTJ1|OUTER capsid protein VP4|Rotavirus X (strain
Query: 2 GYGIMG 7
GYG+MG
Sbjct: 296 GYGVMG 301
>sp|VP4_ROTB2|OUTER capsid protein VP4|Rotavirus X (isolate
Query: 2 GYGIMG 7
GYG+MG
Sbjct: 299 GYGVMG 304
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 AGYGIMGLY 9
AG GIMG Y
Sbjct: 329 AGLGIMGEY 337
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 AGYGIMGLY 9
AG GIMG Y
Sbjct: 329 AGLGIMGEY 337
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 AGYGIMGLY 9
AG GIMG Y
Sbjct: 329 AGLGIMGEY 337
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 AGYGIMGLY 9
AG GIMG Y
Sbjct: 329 AGLGIMGEY 337
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 AGYGIMGL 8
+GYG MGL
Sbjct: 444 SGYGNMGL 451
>sp|NCAP_HMPVC|NUCLEOPROTEIN metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 AGYGIMGLY 9
+G GI+G+Y
Sbjct: 330 SGLGIIGMY 338
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 AGYGIMGLYV 10
G GI+G++V
Sbjct: 1862 GGLGILGIHV 1871
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 AGYGIMGLYV 10
G GI+G++V
Sbjct: 1859 GGLGILGIHV 1868
>sp|PG029_VARV|IFN signaling evasion protein OPG029|Variola virus
Query: 3 YGIMGL 8
YG MGL
Sbjct: 92 YGTMGL 97
>sp|PG029_VAR67|IFN signaling evasion protein OPG029|Variola virus (isolate
Query: 3 YGIMGL 8
YG MGL
Sbjct: 92 YGTMGL 97
>sp|PG029_VACCC|IFN signaling evasion protein OPG029|Vaccinia virus (strain
Query: 3 YGIMGL 8
YG MGL
Sbjct: 92 YGTMGL 97
>sp|PG029_MONPV|IFN signaling evasion protein OPG029|Monkeypox virus (MPXV)
Query: 3 YGIMGL 8
YG MGL
Sbjct: 92 YGTMGL 97
>sp|VE2_HPV38|REGULATORY protein E2|Human papillomavirus 38
Query: 3 YGIMGLY 9
YG+ GL+
Sbjct: 179 YGVTGLW 185
>sp|HN_MUMPZ|HEMAGGLUTININ-NEURAMINIDASE virus genotype N (strain
Query: 1 AGYGIMGLY 9
A YG GL+
Sbjct: 529 APYGTQGLF 537
>sp|VE4_HPV63|PROTEIN E4|Human papillomavirus type 63
Query: 3 YGIMGL 8
YG++GL
Sbjct: 8 YGLLGL 13
>sp|HN_MUMPJ|HEMAGGLUTININ-NEURAMINIDASE virus genotype A (strain
Query: 1 AGYGIMGLY 9
A YG GL+
Sbjct: 529 APYGTQGLF 537
>sp|HN_MUMP1|HEMAGGLUTININ-NEURAMINIDASE virus (strain SBL-1) (MuV)
Query: 1 AGYGIMGLY 9
A YG GL+
Sbjct: 529 APYGTQGLF 537
>sp|MIR1_HHV8P|E3 ubiquitin-protein ligase MIR1|Human herpesvirus 8 type P
Query: 1 AGYGIMGL 8
GYG MG+
Sbjct: 312 GGYGSMGV 319
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 GYGIMGLYV 10
G G M LY+
Sbjct: 226 GIGAMSLYL 234
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 GYGIMGLYV 10
G G M LY+
Sbjct: 226 GIGAMSLYL 234
489|Sequence|2441|2450|MGLYVSIVLV
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 MGLYVS 6
MGLY+S
Sbjct: 397 MGLYIS 402
490|Sequence|2446|2455|SIVLVIGKFV
>sp|VE4_HPV6C|PROBABLE protein E4|Human papillomavirus type 6c
Query: 2 IVLVIGKFV 10
+V +IGK+V
Sbjct: 2 VVPIIGKYV 10
>sp|NS1_INBSI|NON-STRUCTURAL protein 1|Influenza B virus (strain B/Singapore/222/1979)
Query: 3 VLVIGKFV 10
VLV GKF+
Sbjct: 187 VLVNGKFL 194
491|Sequence|2451|2460|IGKFVRGFFS
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 2 GKFVRGFFS 10
G FV+GF S
Sbjct: 1923 GDFVQGFIS 1931
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 2 GKFVRGFFS 10
G FV+GF S
Sbjct: 1923 GDFVQGFIS 1931
>sp|L_MEASA|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 2 GKFVRGFFS 10
G FV+GF S
Sbjct: 1923 GDFVQGFIS 1931
>sp|DNB2_ADE04|DNA-BINDING protein|Human adenovirus E serotype 4
Query: 1 IGKFVRGF 8
+G+F++GF
Sbjct: 223 MGRFLQGF 230
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 3 KFVRGFFS 10
+FV G+FS
Sbjct: 452 EFVEGWFS 459
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 3 KFVRGFFS 10
+FV G+FS
Sbjct: 452 EFVEGWFS 459
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 1 IGKFVRGF 8
IGK VR F
Sbjct: 640 IGKTVRNF 647
>sp|NCAP_TULV|NUCLEOPROTEIN orthohantavirus (TULV) (Tula virus)
Query: 1 IGKFVRGF 8
IG+++ GF
Sbjct: 122 IGQYITGF 129
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 GKFVRGFFS 10
G+F G FS
Sbjct: 402 GQFKEGLFS 410
>sp|PA_INBSI|POLYMERASE acidic protein|Influenza B virus (strain B/Singapore/222/1979)
Query: 2 GKFVRGFF 9
GK V+G F
Sbjct: 621 GKLVKGSF 628
>sp|PA_INBP9|POLYMERASE acidic protein|Influenza B virus (strain B/Panama/45/1990)
Query: 2 GKFVRGFF 9
GK V+G F
Sbjct: 622 GKLVKGSF 629
>sp|PA_INBLE|POLYMERASE acidic protein|Influenza B virus (strain B/Lee/1940)
Query: 2 GKFVRGFF 9
GK V+G F
Sbjct: 622 GKLVKGSF 629
>sp|PA_INBAD|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 GKFVRGFF 9
GK V+G F
Sbjct: 622 GKLVKGSF 629
>sp|PA_INBAC|POLYMERASE acidic protein|Influenza B virus (strain B/Ann
Query: 2 GKFVRGFF 9
GK V+G F
Sbjct: 622 GKLVKGSF 629
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 1 IGKFVRGF 8
+GK VR F
Sbjct: 640 VGKTVRNF 647
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 1 IGKFVRGF 8
+GK VR F
Sbjct: 640 VGKTVRNF 647
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 IGKFVRGFF 9
IGK + G F
Sbjct: 723 IGKGIHGLF 731
>sp|POLG_ILHV|GENOME polyprotein|Ilheus virus (ILHV)
Query: 1 IGKFVRGFF 9
IGK + G F
Sbjct: 723 IGKTIHGVF 731
492|Sequence|2456|2465|RGFFSEISHS
>sp|GL_HHV2H|ENVELOPE glycoprotein L|Human herpesvirus 2 (strain HG52)
Query: 2 GFFSEISHS 10
GF ++SHS
Sbjct: 102 GFLEDLSHS 110
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 5 SEISHS 10
SEISHS
Sbjct: 164 SEISHS 169
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 GFFSEISH 9
GFF+ I H
Sbjct: 6944 GFFTYICH 6951
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 2 GFFSEISH 9
GFF+ I H
Sbjct: 6981 GFFTYICH 6988
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 2 GFFSEISH 9
GFF+ I H
Sbjct: 7031 GFFTYICH 7038
>sp|POLG_DEN1A|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGFFSEISH 9
RGF EIS+
Sbjct: 82 RGFRKEISN 90
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 RGFFSEIS 8
RGFF E S
Sbjct: 4464 RGFFDEGS 4471
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGFFSEISH 9
RGF EIS+
Sbjct: 82 RGFKKEISN 90
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGFFSEISH 9
RGF EIS+
Sbjct: 82 RGFKKEISN 90
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 1 RGFFSEISH 9
RG EI+H
Sbjct: 132 RGMVGEINH 140
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 1 RGFFSEISH 9
RG EI+H
Sbjct: 132 RGMVGEINH 140
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 RGFFSEISH 9
RG EI+H
Sbjct: 135 RGMVGEINH 143
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 1 RGFFSEISH 9
RG EI+H
Sbjct: 130 RGMVGEINH 138
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 1 RGFFSEISH 9
RG EI+H
Sbjct: 133 RGMVGEINH 141
>sp|POLG_DEN1C|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGFFSEIS 8
RGF EIS
Sbjct: 82 RGFKKEIS 89
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RGFFSEIS 8
RGF EIS
Sbjct: 82 RGFKKEIS 89
>sp|PA_I82A2|POLYMERASE acidic protein|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 3 FFSEISH 9
F SE+SH
Sbjct: 29 FTSEVSH 35
>sp|GL_HHV1K|ENVELOPE glycoprotein L|Human herpesvirus 1 (strain KOS)
Query: 2 GFFSEISH 9
GF ++SH
Sbjct: 102 GFLEDLSH 109
>sp|PA_I35A3|POLYMERASE acidic protein|Influenza A virus (strain A/USA:Phila/1935
Query: 3 FFSEISH 9
F SE+SH
Sbjct: 446 FTSEVSH 452
>sp|PA_I06A0|POLYMERASE acidic protein|Influenza A virus (strain
Query: 3 FFSEISH 9
F SE+SH
Sbjct: 446 FTSEVSH 452
>sp|PA_I34A1|POLYMERASE acidic protein|Influenza A virus (strain A/Puerto
Query: 3 FFSEISH 9
F SE+SH
Sbjct: 446 FTSEVSH 452
>sp|PA_I36A0|POLYMERASE acidic protein|Influenza A virus (strain A/Henry/1936
Query: 3 FFSEISH 9
F SE+SH
Sbjct: 446 FTSEVSH 452
>sp|PA_I000X|POLYMERASE acidic protein|Influenza A virus (strain A/X-31
Query: 3 FFSEISH 9
F SE+SH
Sbjct: 446 FTSEVSH 452
493|Sequence|2461|2470|EISHSIMFEE
>sp|POLG_EMCVR|GENOME polyprotein|Encephalomyocarditis virus (strain Rueckert) (EMCV)
Query: 3 SHSIMFEE 10
+HS+ FEE
Sbjct: 11 AHSLTFEE 18
>sp|POLG_EMCV|GENOME polyprotein|Encephalomyocarditis virus
Query: 3 SHSIMFEE 10
+HS+ FEE
Sbjct: 11 AHSLTFEE 18
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 3 SHSIMFEE 10
+HS+ FEE
Sbjct: 11 AHSMTFEE 18
>sp|POLG_ENMG3|GENOME polyprotein|Mengo encephalomyocarditis virus (strain 37A)
Query: 3 SHSIMFEE 10
+HS+ FEE
Sbjct: 11 AHSMTFEE 18
>sp|VIRF2_HHV8P|VIRAL IRF2-like protein|Human herpesvirus 8 type P
Query: 4 HSIMFEE 10
HS+ FEE
Sbjct: 215 HSLFFEE 221
>sp|PAP1_YMTV5|POLY(A) polymerase catalytic subunit|Yaba monkey tumor virus (strain
Query: 1 EISHSIMFEE 10
+I +S+MF+E
Sbjct: 432 DIVNSLMFKE 441
>sp|TEG7_HHV8P|TEGUMENT protein ORF55|Human herpesvirus 8 type P
Query: 1 EISHSI 6
EISHS+
Sbjct: 165 EISHSL 170
>sp|PAP1_YLDV|POLY(A) polymerase catalytic subunit|Yaba-like disease virus (YLDV)
Query: 1 EISHSIMFEE 10
+I +S+MF+E
Sbjct: 432 DIINSLMFKE 441
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 2 ISHSIMFE 9
I HSIM E
Sbjct: 1027 IDHSIMTE 1034
494|Sequence|2466|2475|IMFEELPCVD
>sp|US22_HCMVM|TEGUMENT protein US22|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 EELPCV 9
+ELPCV
Sbjct: 133 QELPCV 138
>sp|US22_HCMVA|EARLY nuclear protein HWLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 EELPCV 9
+ELPCV
Sbjct: 133 QELPCV 138
>sp|VPK2_VACCC|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 IMFEELPCVD 10
I ELPC D
Sbjct: 292 IKIYELPCCD 301
>sp|VPK2_VACCA|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Ankara) (VACV)
Query: 1 IMFEELPCVD 10
I ELPC D
Sbjct: 292 IKIYELPCCD 301
>sp|VPK2_MONPV|SERINE/THREONINE-PROTEIN kinase 2|Monkeypox virus (MPXV)
Query: 1 IMFEELPCVD 10
I ELPC D
Sbjct: 292 IKIYELPCCD 301
>sp|VPK2_VACCT|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain Tian Tan)
Query: 1 IMFEELPCVD 10
I ELPC D
Sbjct: 292 IKIYELPCCD 301
>sp|VPK2_VACCP|SERINE/THREONINE-PROTEIN kinase 2|Vaccinia virus (strain L-IVP) (VACV)
Query: 1 IMFEELPCVD 10
I ELPC D
Sbjct: 259 IKIYELPCCD 268
>sp|EBNA3_EBVG|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 4 EELPCV 9
E+LPC+
Sbjct: 364 EDLPCI 369
>sp|EBNA3_EBVB9|EPSTEIN-BARR nuclear antigen 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 4 EELPCV 9
E+LPC+
Sbjct: 364 EDLPCI 369
>sp|NP03_VZVO|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain Oka
Query: 2 MFEELP 7
MF ELP
Sbjct: 1 MFSELP 6
>sp|NP03_VZVD|NUCLEAR phosphoprotein UL3 homolog|Varicella-zoster virus (strain
Query: 2 MFEELP 7
MF ELP
Sbjct: 1 MFSELP 6
>sp|PG112_MONPV|LATE protein OPG112|Monkeypox virus (MPXV)
Query: 4 EELPCVD 10
E+L CVD
Sbjct: 85 EQLACVD 91
>sp|ICP22_HHV2H|E3 ubiquitin ligase ICP22|Human herpesvirus 2 (strain HG52)
Query: 5 ELPCVD 10
ELPC++
Sbjct: 271 ELPCLN 276
>sp|H7_VACCT|LATE protein H7|Vaccinia virus (strain Tian Tan)
Query: 4 EELPCVD 10
E+L CVD
Sbjct: 85 EQLACVD 91
>sp|PG112_VACCA|LATE protein OPG112|Vaccinia virus (strain Ankara) (VACV)
Query: 4 EELPCVD 10
E+L CVD
Sbjct: 85 EQLACVD 91
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 1 IMFEELPCVD 10
I+ +LPCV+
Sbjct: 15 IIDRKLPCVN 24
>sp|RIR1_HHV6U|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 6A (strain
Query: 1 IMFEELP 7
+MFEEL
Sbjct: 196 VMFEELA 202
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 3 FEELPCV 9
FEE+ C+
Sbjct: 140 FEEMKCI 146
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 FEELPCV 9
FEE+ C+
Sbjct: 140 FEEMKCI 146
495|Sequence|2471|2480|LPCVDRILKL
>sp|HELI_HCMVA|DNA replication helicase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LPCVDR 6
+PCVDR
Sbjct: 102 VPCVDR 107
>sp|HELI_HCMVM|DNA replication helicase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LPCVDR 6
+PCVDR
Sbjct: 102 VPCVDR 107
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 CVDRIL 8
CVDR+L
Sbjct: 1907 CVDRVL 1912
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 PCVDRIL 8
PC D+I+
Sbjct: 867 PCADKII 873
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PCVDRIL 8
PC D+I+
Sbjct: 867 PCSDKII 873
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PCVDRIL 8
PC D+I+
Sbjct: 867 PCSDKII 873
>sp|TEG1_HHV11|TEGUMENT protein UL46|Human herpesvirus 1 (strain 17)
Query: 1 LPCVDRILKL 10
L C DR ++L
Sbjct: 67 LTCTDRSVRL 76
>sp|GH_EBVG|ENVELOPE glycoprotein H|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 CVDRILKL 10
CVDR+ K+
Sbjct: 534 CVDRLDKV 541
>sp|GH_EBVB9|ENVELOPE glycoprotein H|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 CVDRILKL 10
CVDR+ K+
Sbjct: 534 CVDRLDKV 541
>sp|GH_EBVA8|ENVELOPE glycoprotein H|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 CVDRILKL 10
CVDR+ K+
Sbjct: 534 CVDRLDKV 541
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1233 CVDHAMKL 1240
>sp|TEG1_HHV1F|TEGUMENT protein UL46|Human herpesvirus 1 (strain F)
Query: 1 LPCVDRILKL 10
L C DR ++L
Sbjct: 67 LTCTDRSVRL 76
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1233 CVDHAMKL 1240
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1233 CVDHAMKL 1240
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1233 CVDHAMKL 1240
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 VDRILKL 10
VDR+LK+
Sbjct: 2625 VDRLLKM 2631
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1233 CVDHAMKL 1240
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1233 CVDHAMKL 1240
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 PCVDRIL 8
PC D+I+
Sbjct: 867 PCNDKII 873
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1235 CVDHAMKL 1242
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 CVDRIL 8
CV+R+L
Sbjct: 1907 CVERVL 1912
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 3 CVDRILKL 10
CVD +KL
Sbjct: 1230 CVDHSMKL 1237
496|Sequence|2476|2485|RILKLCQDIF
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 ILKLCQD 8
I+K CQD
Sbjct: 1448 IIKYCQD 1454
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 6 CQDIF 10
CQD+F
Sbjct: 1115 CQDLF 1119
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 ILKLCQDIF 10
+L LC D+F
Sbjct: 1137 MLFLCSDMF 1145
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 3 LKLCQD 8
+KLC+D
Sbjct: 549 MKLCKD 554
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 3 LKLCQD 8
+KLC+D
Sbjct: 549 MKLCKD 554
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 3 LKLCQD 8
+KLC+D
Sbjct: 549 MKLCKD 554
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 3 LKLCQD 8
+KLC+D
Sbjct: 549 MKLCKD 554
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 3 LKLCQD 8
+KLC+D
Sbjct: 549 MKLCKD 554
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 ILKLCQDI 9
I K CQD+
Sbjct: 831 ITKHCQDL 838
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 2 ILKLCQDI 9
I K CQD+
Sbjct: 968 IAKHCQDL 975
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 4 KLCQDIF 10
KLC DI+
Sbjct: 9 KLCCDIY 15
>sp|UL79_HHV7J|PROTEIN U52|Human herpesvirus 7 (strain JI)
Query: 1 RILKLCQ 7
R+LKLC+
Sbjct: 160 RLLKLCR 166
>sp|RDRP_I97A1|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain A/Hong
Query: 2 ILKLCQDI 9
ILK+C I
Sbjct: 743 ILKICSTI 750
>sp|RDRP_I97A0|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza A virus (strain
Query: 2 ILKLCQDI 9
ILK+C I
Sbjct: 743 ILKICSTI 750
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 KLCQDIF 10
KLC DI+
Sbjct: 9 KLCCDIY 15
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 4 KLCQDIF 10
KLC DI+
Sbjct: 9 KLCCDIY 15
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 1 RILKLCQD 8
I+K+C D
Sbjct: 216 EIMKMCHD 223
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 1 RILKLC 6
RIL+LC
Sbjct: 294 RILELC 299
497|Sequence|2481|2490|CQDIFLVRET
>sp|MCP_HHV8P|MAJOR capsid protein|Human herpesvirus 8 type P
Query: 1 CQDIFLV 7
CQD+F++
Sbjct: 1115 CQDLFMI 1121
>sp|NRAM_I61A1|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1961
Query: 3 DIFLVRE 9
DIF++RE
Sbjct: 113 DIFVIRE 119
>sp|LT_POVBA|LARGE T antigen|BK polyomavirus (strain AS) (BKPyV)
Query: 1 CQDIFLV 7
C+D+FL+
Sbjct: 284 CEDVFLL 290
>sp|LT_POVBK|LARGE T antigen|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 CQDIFLV 7
C+D+FL+
Sbjct: 284 CEDVFLL 290
>sp|LT_POVJC|LARGE T antigen|JC polyomavirus (JCPyV) (JCV)
Query: 1 CQDIFLV 7
C+D+FL+
Sbjct: 283 CEDVFLL 289
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 94 DVFVIRE 100
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 94 DVFVIRE 100
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I82A2|NEURAMINIDASE A virus (strain A/Camel/Mongolia/1982
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 96 DVFVIRE 102
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I45A0|NEURAMINIDASE A virus (strain A/USA:Huston/AA/1945
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I43A0|NEURAMINIDASE A virus (strain A/USA:Iowa/1943
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I40A0|NEURAMINIDASE A virus (strain A/Hickox/1940
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I36A0|NEURAMINIDASE A virus (strain A/Henry/1936
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I35A3|NEURAMINIDASE A virus (strain A/USA:Phila/1935
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I34A1|NEURAMINIDASE A virus (strain A/Puerto
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 98 DVFVIRE 104
>sp|NRAM_I33A0|NEURAMINIDASE A virus (strain A/Wilson-Smith/1933
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 97 DVFVIRE 103
>sp|NRAM_I18A0|NEURAMINIDASE A virus (strain A/Brevig
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 85 DVFVIRE 91
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 98 DVFVIRE 104
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I01A1|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 93 DVFVIRE 99
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVIRE 119
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 CQDIFLVR 8
C D+FL++
Sbjct: 1141 CSDMFLMK 1148
>sp|NRAM_I76AI|NEURAMINIDASE A virus (strain A/Swine/New
Query: 3 DIFLVRE 9
DIF++RE
Sbjct: 113 DIFVMRE 119
>sp|NRAM_I76A7|NEURAMINIDASE A virus (strain A/New
Query: 3 DIFLVRE 9
DIF++RE
Sbjct: 113 DIFVMRE 119
>sp|NRAM_I67A2|NEURAMINIDASE A virus (strain A/Swine/Wisconsin/1/1967
Query: 3 DIFLVRE 9
DIF++RE
Sbjct: 113 DIFVMRE 119
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 3 DIFLVRE 9
D+F++RE
Sbjct: 113 DVFVMRE 119
498|Sequence|2486|2495|LVRETRELEL
>sp|DNBI_HHV8P|MAJOR DNA-binding protein|Human herpesvirus 8 type P
Query: 1 LVRETREL 8
L RE+REL
Sbjct: 113 LCRESREL 120
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VRETRELEL 10
+RE E+EL
Sbjct: 1303 IREIEEVEL 1311
>sp|DPOL_HHV11|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain 17)
Query: 1 LVRETRELE 9
+V +TRE+E
Sbjct: 1076 IVAQTREVE 1084
>sp|DPOL_HHV1K|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain KOS)
Query: 1 LVRETRELE 9
+V +TRE+E
Sbjct: 1076 IVAQTREVE 1084
>sp|DPOL_HHV1S|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain SC16)
Query: 1 LVRETRELE 9
+V +TRE+E
Sbjct: 1076 IVAQTREVE 1084
>sp|DPOL_HHV1A|DNA polymerase catalytic subunit|Human herpesvirus 1 (strain Angelotti)
Query: 1 LVRETRELE 9
+V +TRE+E
Sbjct: 1076 IVAQTREVE 1084
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 2 VRETRELEL 10
+RE E+EL
Sbjct: 1303 IREIEEVEL 1311
>sp|DPOL_HHV2H|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain HG52)
Query: 1 LVRETRELE 9
+V +TRE+E
Sbjct: 1081 IVAQTREVE 1089
>sp|DPOL_HHV21|DNA polymerase catalytic subunit|Human herpesvirus 2 (strain 186)
Query: 1 LVRETRELE 9
+V +TRE+E
Sbjct: 1081 IVAQTREVE 1089
499|Sequence|2491|2500|RELELEEELY
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ELEEELY 10
ELEEE++
Sbjct: 1651 ELEEEMF 1657
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 RELELEEELY 10
+++ +EEE+Y
Sbjct: 2648 KDIRVEEEVY 2657
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ELEEELY 10
ELEEE++
Sbjct: 1651 ELEEEMF 1657
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ELEEELY 10
ELEEE++
Sbjct: 1651 ELEEEMF 1657
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ELEEELY 10
ELEEE++
Sbjct: 1651 ELEEEMF 1657
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 4 ELEEELY 10
ELEEE++
Sbjct: 1651 ELEEEMF 1657
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 RELELEEELY 10
+++ +EEE+Y
Sbjct: 2661 QDIRVEEEIY 2670
>sp|POLG_COSAA|GENOME polyprotein|Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A)
Query: 3 LELEEE 8
LELEEE
Sbjct: 1045 LELEEE 1050
>sp|SCAF_HHV8P|CAPSID scaffolding protein|Human herpesvirus 8 type P
Query: 4 ELEEELY 10
+LE+ELY
Sbjct: 18 KLEQELY 24
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 ELELEEELY 10
ELE+EE+ Y
Sbjct: 180 ELEIEEQEY 188
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 ELELEEEL 9
+++LEEEL
Sbjct: 1499 DVQLEEEL 1506
>sp|POL_HV1MV|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 ELELEE 7
ELELEE
Sbjct: 888 ELELEE 893
500|Sequence|2496|2505|EEELYAKLIF
>sp|VL1_HPV50|MAJOR capsid protein L1|Human papillomavirus type 50
Query: 1 EEELYAKLIF 10
+E+LYA+ +F
Sbjct: 251 QEQLYARHLF 260
>sp|VL1_HPV65|MAJOR capsid protein L1|Human papillomavirus 65
Query: 2 EELYAKLIF 10
E+LYA+ F
Sbjct: 254 EQLYARHFF 262
>sp|VL1_HPV04|MAJOR capsid protein L1|Human papillomavirus 4
Query: 2 EELYAKLIF 10
E+LYA+ F
Sbjct: 254 EQLYARHFF 262
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 EELYAKL 8
EELY K+
Sbjct: 2152 EELYPKI 2158
>sp|RDRP_INBP9|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EEELYAK 7
EE+ YAK
Sbjct: 684 EEQCYAK 690
>sp|RDRP_INBLE|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain
Query: 1 EEELYAK 7
EE+ YAK
Sbjct: 684 EEQCYAK 690
>sp|RDRP_INBAD|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EEELYAK 7
EE+ YAK
Sbjct: 684 EEQCYAK 690
>sp|RDRP_INBAC|RNA-DIRECTED RNA polymerase catalytic subunit|Influenza B virus (strain B/Ann
Query: 1 EEELYAK 7
EE+ YAK
Sbjct: 684 EEQCYAK 690
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 EELYAKLIF 10
+ELY KL+
Sbjct: 408 QELYGKLML 416
501|Sequence|2501|2510|AKLIFLYRSP
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 3 LIFLYRSP 10
L F+YR P
Sbjct: 219 LSFIYRKP 226
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 3 LIFLYRSP 10
L F+YR P
Sbjct: 219 LSFIYRKP 226
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 LIFLYRSP 10
L F+YR P
Sbjct: 219 LSFIYRKP 226
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 3 LIFLYRSP 10
L F+YR P
Sbjct: 219 LSFIYRKP 226
>sp|VL1_HPV56|MAJOR capsid protein L1|Human papillomavirus 56
Query: 3 LIFLYRSP 10
++++YR P
Sbjct: 5 MMYIYRDP 12
502|Sequence|2506|2515|LYRSPETMIK
>sp|PG129_VARV|MAJOR core protein OPG129|Variola virus
Query: 1 LYRSPET 7
+YR PET
Sbjct: 222 IYRKPET 228
>sp|PG129_VAR67|MAJOR core protein OPG129|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LYRSPET 7
+YR PET
Sbjct: 222 IYRKPET 228
>sp|PG129_VACCC|MAJOR core protein OPG129|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LYRSPET 7
+YR PET
Sbjct: 222 IYRKPET 228
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 1 LYRSPET 7
LYR+P+T
Sbjct: 1382 LYRAPQT 1388
>sp|PG129_MONPV|MAJOR core protein OPG129|Monkeypox virus (MPXV)
Query: 1 LYRSPET 7
+YR PET
Sbjct: 222 IYRKPET 228
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 2 YRSPETM 8
YRSP T+
Sbjct: 48 YRSPPTL 54
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 2 YRSPETM 8
YRSP T+
Sbjct: 45 YRSPPTL 51
>sp|CAPSD_TTVV7|CAPSID protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 LYRSPET 7
YRSP+T
Sbjct: 161 FYRSPDT 167
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LYRSPETMI 9
LY+ P+T I
Sbjct: 3226 LYQPPQTSI 3234
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 1 LYRSPET 7
LYR+P T
Sbjct: 1385 LYRAPRT 1391
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 1 LYRSPET 7
LYR+P T
Sbjct: 1385 LYRAPRT 1391
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 LYRSPET 7
+YR P+T
Sbjct: 157 VYRQPQT 163
>sp|US23_HCMVA|TEGUMENT protein US23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LYRSPET 7
+YR P+T
Sbjct: 157 VYRQPQT 163
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LYRSPETMI 9
LY+ P+T I
Sbjct: 3226 LYQPPQTSI 3234
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 LYRSPETMI 9
LY+ P+T I
Sbjct: 3249 LYQPPQTSI 3257
>sp|HEMA_I02A5|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPNTYI 214
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 1 LYRSPETMIK 10
L ++PE M+K
Sbjct: 574 LDKTPELMVK 583
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 LYRSPETMI 9
LY+ P+T I
Sbjct: 3249 LYQPPQTSI 3257
>sp|HEMA_I02A4|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I05A1|HEMAGGLUTININ A virus (strain A/Goose/Guangxi/345/2005
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I01A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 195 LYQNPTTYI 203
>sp|HEMA_I96A0|HEMAGGLUTININ A virus (strain A/Goose/Guangdong/1/1996
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I03A1|HEMAGGLUTININ A virus (strain A/Chicken/Shantou/4231/2003
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I02A2|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I02A1|HEMAGGLUTININ A virus (strain A/Guinea
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 204 LYQNPTTYI 212
>sp|HEMA_I01A0|HEMAGGLUTININ A virus (strain A/Silky
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 195 LYQNPTTYI 203
>sp|HEMA_I03A0|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I01A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 195 LYQNPTTYI 203
>sp|HEMA_I01A1|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 195 LYQNPTTYI 203
>sp|HEMA_I00A0|HEMAGGLUTININ A virus (strain A/Duck/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I02A7|HEMAGGLUTININ A virus (strain A/Teal/China/2978.1/2002
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 202 LYQNPTTYI 210
>sp|HEMA_I02A3|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I97A1|HEMAGGLUTININ A virus (strain A/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|HEMA_I97A0|HEMAGGLUTININ A virus (strain A/Chicken/Hong
Query: 1 LYRSPETMI 9
LY++P T I
Sbjct: 206 LYQNPTTYI 214
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 1 LYRSPET 7
LYR PE
Sbjct: 1372 LYRRPEN 1378
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 LYRSPET 7
+Y+ PET
Sbjct: 430 MYKRPET 436
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 LYRSPET 7
+Y+ PET
Sbjct: 430 MYKRPET 436
503|Sequence|2511|2521|ETMIKWTREKE
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 4 IKWTRE 9
I+WTR+
Sbjct: 2118 IRWTRD 2123
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 4 IKWTREK 10
I W REK
Sbjct: 1140 IDWLREK 1146
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 4 IKWTREK 10
I W REK
Sbjct: 1153 IDWLREK 1159
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra Leone/Josiah/1976)
Query: 3 MIKWTREK 10
++KW RE+
Sbjct: 1801 IVKWKREE 1808
>sp|L_LASV|RNA-DIRECTED RNA polymerase L|Mammarenavirus lassaense
Query: 3 MIKWTREK 10
++KW RE+
Sbjct: 1802 IVKWKREE 1809
>sp|NCAP_I81A1|NUCLEOPROTEIN A virus (strain A/Swine/Italy/141/1981
Query: 5 KWTRE 9
KWTRE
Sbjct: 103 KWTRE 107
>sp|KRB2_MONPV|PSEUDOKINASE OPG198|Monkeypox virus (MPXV)
Query: 2 TMIKWTREK 10
T+ WTRE+
Sbjct: 69 TINNWTRER 77
>sp|KRB2_VACCC|PSEUDOKINASE OPG198|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 TMIKWTREK 10
T+ WTRE+
Sbjct: 69 TIDNWTRER 77
>sp|KRB2_VACCA|PSEUDOKINASE OPG198|Vaccinia virus (strain Ankara) (VACV)
Query: 2 TMIKWTREK 10
T+ WTRE+
Sbjct: 69 TIDNWTRER 77
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 MIKWTRE 9
+I WTR+
Sbjct: 419 VINWTRD 425
>sp|BEL1_SFV3L|PROTEIN Bel-1|Simian foamy virus type 3
Query: 3 MIKWTREKE 11
M W +EKE
Sbjct: 1 MASWEKEKE 9