PGFRB_HUMAN Blast Output
Archaea
1|Sequence|1|10|MRLPGAMPAL

>sp|GATB_METB6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanoregula boonei (strain DSM 21154

Query: 3 LPGAMPAL 10
LPG MPAL
Sbjct: 46 LPGTMPAL 53


>sp|GATB_METBU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcoides burtonii (strain DSM

Query: 1 MRLPGAMPAL 10
M LPGA+P +
Sbjct: 48 MGLPGALPVI 57


>sp|GATB_HALSA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Halobacterium salinarum (strain ATCC

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 52 LPGALPTL 59


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 54 LPGALPVL 61


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 53 LPGALPVL 60


>sp|GATB_METMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina mazei (strain ATCC

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 50 LPGALPVL 57


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 MRLPGAMPAL 10
+RLPG +P+L
Sbjct: 265 VRLPGGVPSL 274


>sp|GATB_SACS2|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Saccharolobus solfataricus (strain

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 43 LPGAIPVL 50


>sp|GATB_SULAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 43 LPGAIPVL 50


>sp|ARGC_METMA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MRLPGAMPAL 10
+RLPG +P+L
Sbjct: 269 VRLPGGVPSL 278


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 3 LPGAMPAL 10
+PGAMP +
Sbjct: 45 MPGAMPVI 52


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 2 RLPGAMPA 9
RLPG +PA
Sbjct: 178 RLPGDLPA 185


>sp|GATB_SULTO|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Sulfurisphaera tokodaii (strain DSM

Query: 3 LPGAMPAL 10
LPGA+P L
Sbjct: 43 LPGAIPVL 50


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 3 LPGAMPAL 10
LPGA+P +
Sbjct: 53 LPGALPVV 60


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 PGAMPAL 10
PGA PAL
Sbjct: 102 PGAKPAL 108


>sp|GATB_METHJ|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanospirillum hungatei JF-1 (strain

Query: 3 LPGAMP 8
LPG+MP
Sbjct: 46 LPGSMP 51


>sp|CHEB1_METMA|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina mazei

Query: 2 RLPGAMPA 9
RLPG +PA
Sbjct: 184 RLPGDLPA 191


>sp|GATB_METBF|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina barkeri (strain Fusaro

Query: 3 LPGAMPAL 10
LPG +P L
Sbjct: 50 LPGTLPVL 57


>sp|GATB_METAC|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosarcina acetivorans (strain

Query: 3 LPGAMPAL 10
LPG +P L
Sbjct: 50 LPGTLPVL 57


>sp|CHEB1_METAC|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase 1|Methanosarcina

Query: 2 RLPGAMPA 9
RLPG +PA
Sbjct: 176 RLPGDLPA 183


>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 3 LPGAMPAL 10
+P AMPA+
Sbjct: 267 IPAAMPAV 274


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 RLPGAMPAL 10
+LPGA P L
Sbjct: 893 KLPGADPVL 901


>sp|CARB_METMA|CARBAMOYL phosphate synthase large chain|Methanosarcina mazei (strain ATCC

Query: 2 RLPGAMPAL 10
+LPGA P L
Sbjct: 892 KLPGADPVL 900


>sp|CARB_METAC|CARBAMOYL phosphate synthase large chain|Methanosarcina acetivorans (strain

Query: 2 RLPGAMPAL 10
+LPGA P L
Sbjct: 892 KLPGADPVL 900


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 2 RLPGAMPAL 10
+LPGA P L
Sbjct: 216 KLPGADPVL 224


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 3 LPGAMPAL 10
LPG+MP L
Sbjct: 163 LPGSMPPL 170




2|Sequence|6|15|AMPALALKGE

>sp|HYD2A_PYRFU|SULFHYDROGENASE 2 subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AMPALALKGE 10
A+P L LKGE
Sbjct: 255 ALPRLLLKGE 264


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PALALKG 9
PALALKG
Sbjct: 46 PALALKG 52


>sp|SYR_ARCFU|ARGININE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AMPALALKGE 10
MP L KGE
Sbjct: 451 GMPELEFKGE 460


>sp|CBIM_METST|PUTATIVE cobalt transport protein CbiM|Methanosphaera stadtmanae (strain

Query: 1 AMPALALKG 9
AMP LAL G
Sbjct: 41 AMPMLALSG 49


>sp|SAHH_THEVO|ADENOSYLHOMOCYSTEINASE volcanium (strain ATCC 51530

Query: 1 AMPALALKGE 10
MP A KGE
Sbjct: 85 GMPVFARKGE 94


>sp|SAHH_THEAC|ADENOSYLHOMOCYSTEINASE acidophilum (strain ATCC 25905

Query: 1 AMPALALKGE 10
MP A KGE
Sbjct: 85 GMPVFARKGE 94


>sp|TRPD_METTH|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 2 MPALALKGE 10
+ ALA+KGE
Sbjct: 42 LTALAMKGE 50


>sp|TRPD_METTM|ANTHRANILATE phosphoribosyltransferase|Methanothermobacter marburgensis

Query: 2 MPALALKGE 10
+ ALA+KGE
Sbjct: 42 LTALAMKGE 50




3|Sequence|11|20|ALKGELLLLS

>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LKGELLLLS 10
LKG L+LLS
Sbjct: 751 LKGSLILLS 759


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 LKGELLLLS 10
LKG L+LLS
Sbjct: 753 LKGSLVLLS 761


>sp|RNZ_METMA|RIBONUCLEASE Z|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LKGELLLL 9
LKGELLL
Sbjct: 27 LKGELLLF 34


>sp|Y2270_ARCFU|UNCHARACTERIZED protein AF_2270|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LKGELLLL 9
+KGEL+L+
Sbjct: 54 MKGELILI 61




4|Sequence|16|25|LLLLSLLLLL

***** No hits found ******


5|Sequence|21|30|LLLLLEPQIS

***** No hits found ******


6|Sequence|26|35|EPQISQGLVV

>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EPQISQGLVV 10
EP +S+GLV+
Sbjct: 101 EPCLSEGLVI 110


>sp|GCSPA_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SULAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 1 EPQISQGLV 9
+P+ISQGL+
Sbjct: 105 QPEISQGLL 113


>sp|GCSPA_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 111 QPEISQGIL 119


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 92 QPEISQGML 100


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 101 QPEISQGML 109


>sp|GCSPA_THEON|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 101 QPEISQGML 109


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 QISQGLVV 10
ISQGLVV
Sbjct: 253 HISQGLVV 260


>sp|GCSPA_THEKO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 101 QPEISQGML 109


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 102 QPEISQGML 110


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 EPQISQGLV 9
+P++SQG++
Sbjct: 92 QPEVSQGML 100


>sp|GCSPA_PYRHO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 102 QPEISQGML 110


>sp|GCSPA_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 EPQISQGLV 9
+P+ISQG++
Sbjct: 105 QPEISQGIL 113


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EPQISQGLVV 10
EP I +G+VV
Sbjct: 195 EPYIERGMVV 204


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 1 EPQISQGLV 9
+P+++QGL+
Sbjct: 105 QPEVNQGLL 113




7|Sequence|31|40|QGLVVTPPGP

>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 GLVVTPPGP 10
G+V+TP GP
Sbjct: 142 GIVITPDGP 150


>sp|FAU1_SULTO|PROBABLE ribonuclease FAU-1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QGLVVTPP 8
+GLVV PP
Sbjct: 106 KGLVVKPP 113


>sp|RF1_PYRAE|PEPTIDE chain release factor subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 QGLVVTPPGP 10
+G++V PGP
Sbjct: 222 KGIIVAGPGP 231


>sp|FAU1_SULAC|PROBABLE ribonuclease FAU-1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 QGLVVTPP 8
+GLV+ PP
Sbjct: 106 EGLVIKPP 113


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 VVTPPG 9
VVTPPG
Sbjct: 268 VVTPPG 273


>sp|RF1_PYRFU|PEPTIDE chain release factor subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 QGLVVTPPGP 10
+G++V PGP
Sbjct: 220 KGIIVGGPGP 229


>sp|RF1_PYRAB|PEPTIDE chain release factor subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 QGLVVTPPGP 10
+G++V PGP
Sbjct: 217 KGIIVGGPGP 226


>sp|RF1_METKA|PEPTIDE chain release factor subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 QGLVVTPPGP 10
+G++V PGP
Sbjct: 214 KGIIVGGPGP 223


>sp|HIS2_PYRFU|HISTIDINE biosynthesis bifunctional protein HisIE|Pyrococcus furiosus

Query: 3 LVVTPPGP 10
L+V+P GP
Sbjct: 87 LIVSPKGP 94


>sp|THYX_HALMA|FLAVIN-DEPENDENT thymidylate synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 LVVTPP 8
LVVTPP
Sbjct: 117 LVVTPP 122


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 3 LVVTPPGP 10
+ ++PPGP
Sbjct: 498 VAISPPGP 505


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 VTPPGP 10
+TPPGP
Sbjct: 247 LTPPGP 252


>sp|RF1_THESM|PEPTIDE chain release factor subunit|Thermococcus sibiricus (strain DSM

Query: 1 QGLVVTPPGP 10
+G+++ PGP
Sbjct: 217 KGIIIGGPGP 226


>sp|RF1_THEON|PEPTIDE chain release factor subunit|Thermococcus onnurineus (strain NA1)

Query: 1 QGLVVTPPGP 10
+G+++ PGP
Sbjct: 217 KGIIIGGPGP 226


>sp|RF1_PYRHO|PEPTIDE chain release factor subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 QGLVVTPPGP 10
+G+++ PGP
Sbjct: 220 KGIIIGGPGP 229


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 4 VVTPPG 9
VVTPPG
Sbjct: 268 VVTPPG 273


>sp|RF1_THEKO|PEPTIDE chain release factor subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 QGLVVTPPGP 10
+G+++ PGP
Sbjct: 217 RGIIIGGPGP 226


>sp|FAU1_SACS2|PROBABLE ribonuclease FAU-1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QGLVVTPP 8
+G+V+ PP
Sbjct: 111 EGIVIKPP 118


>sp|FAU1_SACI7|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QGLVVTPP 8
+G+V+ PP
Sbjct: 111 EGIVIKPP 118


>sp|FAU1_SACI6|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.4 /

Query: 1 QGLVVTPP 8
+G+V+ PP
Sbjct: 111 EGIVIKPP 118


>sp|FAU1_SACI4|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QGLVVTPP 8
+G+V+ PP
Sbjct: 111 EGIVIKPP 118


>sp|FAU1_SACI3|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain M.16.27)

Query: 1 QGLVVTPP 8
+G+V+ PP
Sbjct: 111 EGIVIKPP 118


>sp|FAU1_SACI2|PROBABLE ribonuclease FAU-1|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QGLVVTPP 8
+G+V+ PP
Sbjct: 111 EGIVIKPP 118


>sp|GGGPS_METHJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LVVTPPGP 10
LVV P GP
Sbjct: 63 LVVEPAGP 70


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 LVVTPP 8
LVVTPP
Sbjct: 117 LVVTPP 122


>sp|TDXH_AERPE|PEROXIREDOXIN pernix (strain ATCC 700893

Query: 1 QGLVVTPP 8
+GL+V PP
Sbjct: 183 EGLIVPPP 190


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 4 VVTPPG 9
V+TPPG
Sbjct: 26 VITPPG 31


>sp|LEUC2_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 2 GLVVTPPG 9
G+V+ PPG
Sbjct: 312 GVVILPPG 319


>sp|HISX_METBF|HISTIDINOL dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QGLVVTPPGP 10
Q +V TPP P
Sbjct: 155 QVIVCTPPRP 164


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 GLVVTPPGP 10
G + TPP P
Sbjct: 225 GALFTPPDP 233


>sp|RS19E_METJA|SMALL ribosomal subunit protein eS19|Methanocaldococcus jannaschii

Query: 1 QGLVVTPPG 9
+G VVTP G
Sbjct: 115 EGRVVTPKG 123


>sp|DAPAL_THEPD|UNCHARACTERIZED DapA-like lyase Tpen_1666|Thermofilum pendens (strain DSM 2475

Query: 2 GLVVTPP 8
G VVTPP
Sbjct: 102 GAVVTPP 108


>sp|MTBB3_METMA|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|MTBB2_METMA|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|MTBB2_METAC|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina acetivorans (strain ATCC

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|MTBB2_METBF|DIMETHYLAMINE methyltransferase MtbB2|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|MTBB1_METMA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 2 GLVVTP 7
GLVVTP
Sbjct: 311 GLVVTP 316


>sp|MTBB3_METAC|DIMETHYLAMINE methyltransferase MtbB3|Methanosarcina acetivorans (strain ATCC

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|MTBB1_METAC|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina acetivorans (strain ATCC

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162


>sp|MTBB1_METBA|DIMETHYLAMINE methyltransferase MtbB1|Methanosarcina barkeri

Query: 2 GLVVTPPGP 10
GL TP GP
Sbjct: 154 GLYYTPDGP 162




8|Sequence|36|45|TPPGPELVLN

>sp|FRHG_METBF|COENZYME F420 hydrogenase subunit gamma|Methanosarcina barkeri (strain

Query: 2 PPGPELVLN 10
PP PEL+ N
Sbjct: 130 PPSPELIRN 138


>sp|QUEC_AERPE|7-CYANO-7-DEAZAGUANINE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PPGPE 6
PPGPE
Sbjct: 247 PPGPE 251


>sp|QUEC_PYRAE|7-CYANO-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TPPGP 5
TPPGP
Sbjct: 248 TPPGP 252


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 689 PPAPEFLL 696


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 2 PPGPELVLN 10
PP PE++ N
Sbjct: 223 PPSPEVLAN 231


>sp|ACDA1_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 689 PPAPEFLL 696


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 688 PPAPEFLL 695


>sp|ACDA1_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 689 PPAPEFLL 696


>sp|ACDA3_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 688 PPAPEFLL 695


>sp|ACDA1_METBF|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina barkeri

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 689 PPAPEFLL 696


>sp|ACDA2_METMA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina mazei

Query: 2 PPGPELVL 9
PP PE +L
Sbjct: 689 PPAPEFLL 696


>sp|RL10_PICTO|LARGE ribosomal subunit protein uL10|Picrophilus torridus (strain ATCC

Query: 2 PPGPEL 7
PPGP++
Sbjct: 127 PPGPKI 132


>sp|FRHG_METTH|COENZYME F420 hydrogenase subunit gamma|Methanothermobacter

Query: 2 PPGPELV 8
PP PE++
Sbjct: 133 PPSPEII 139


>sp|GGGPS_METB6|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoregula boonei (strain DSM 21154

Query: 2 PPGPELVL 9
P GPE VL
Sbjct: 65 PAGPEAVL 72


>sp|VHCG_METVO|F420-NON-REDUCING hydrogenase vhc subunit G|Methanococcus voltae

Query: 2 PPGPELV 8
PP PEL+
Sbjct: 150 PPKPELI 156


>sp|GGGPS_METPE|GERANYLGERANYLGLYCERYL phosphate synthase|Methanosphaerula palustris (strain ATCC

Query: 2 PPGPELVL 9
P GPE VL
Sbjct: 67 PAGPEAVL 74


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 TPPGPELV 8
TP GP+ V
Sbjct: 366 TPDGPQFV 373




9|Sequence|41|50|ELVLNVSSTF

>sp|SECY_SULAC|PROTEIN translocase subunit SecY|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ELVLNVSST 9
E+VLN SST
Sbjct: 223 EIVLNTSST 231


>sp|HIS4_METBF|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina barkeri (strain

Query: 1 ELVLNVSSTF 10
ELV +SSTF
Sbjct: 116 ELVQQLSSTF 125




10|Sequence|46|55|VSSTFVLTCS

>sp|RFCS_METTH|REPLICATION factor C small subunit|Methanothermobacter thermautotrophicus

Query: 2 SSTFVLTCS 10
+S+F+L+C+
Sbjct: 132 TSSFILSCN 140


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SSTFVLTCS 10
+S+F+L+C+
Sbjct: 129 TSSFILSCN 137




11|Sequence|51|60|VLTCSGSAPV

>sp|HDRC2_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 41 TCTGSCP 47


>sp|HDRC_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 46 TCTGSCP 52


>sp|FAEHP_METAR|BIFUNCTIONAL enzyme Fae/Hps|Methanocella arvoryzae (strain DSM 22066

Query: 2 LTCSGSAPV 10
+ CSG AP+
Sbjct: 254 VVCSGLAPI 262


>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi

Query: 3 TCSGSAPV 10
+C GS+PV
Sbjct: 38 SCPGSSPV 45


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 40 TCTGSCP 46


>sp|HDRC2_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C2|Methanococcus

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 39 TCTGSCP 45


>sp|HDRC_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 40 TCTGSCP 46


>sp|HDRC_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 40 TCTGSCP 46


>sp|THIM_METMJ|HYDROXYETHYLTHIAZOLE kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VLTCSGSAPV 10
+ C+G+APV
Sbjct: 48 ITICAGAAPV 57


>sp|HDRC_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina mazei (strain

Query: 3 TCSGSAP 9
TC+GS P
Sbjct: 24 TCTGSCP 30




12|Sequence|56|65|GSAPVVWERM

>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GSAPVVWERM 10
G +PV+W+++
Sbjct: 223 GGSPVLWQQL 232


>sp|KAD_PYRAB|ADENYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GSAPVVWERM 10
GS VWER+
Sbjct: 197 GSIDEVWERI 206


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 SAPVVWER 9
S PVVW++
Sbjct: 488 SVPVVWQQ 495


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 GSAPVVWERM 10
GS VWER+
Sbjct: 197 GSINEVWERI 206


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GSAPVVWERM 10
GS VWER+
Sbjct: 197 GSINEVWERI 206


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GSAPVVWE 8
G+ P+VW+
Sbjct: 143 GAHPIVWD 150


>sp|AOCD_METTH|ORNITHINE cyclodeaminase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 GSAPVVWE 8
GSAPV+ E
Sbjct: 215 GSAPVIAE 222


>sp|SYE_ARCFU|GLUTAMATE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 VWERM 10
VWERM
Sbjct: 220 VWERM 224


>sp|SURE_HALWD|5'-NUCLEOTIDASE SurE|Haloquadratum walsbyi (strain DSM 16790

Query: 6 VWERM 10
VWERM
Sbjct: 212 VWERM 216


>sp|RL15E_METLZ|LARGE ribosomal subunit protein eL15|Methanocorpusculum labreanum

Query: 1 GSAPVVWERM 10
G ++WERM
Sbjct: 20 GVKKLLWERM 29




13|Sequence|61|70|VWERMSQEPP

>sp|RL31_METPE|LARGE ribosomal subunit protein eL31|Methanosphaerula palustris (strain

Query: 1 VWERMSQEPP 10
VWER S++PP
Sbjct: 56 VWERGSEKPP 65


>sp|RL31_METLZ|LARGE ribosomal subunit protein eL31|Methanocorpusculum labreanum

Query: 1 VWERMSQEPP 10
VW R SQ+PP
Sbjct: 56 VWARGSQKPP 65


>sp|RL31_HALWD|LARGE ribosomal subunit protein eL31|Haloquadratum walsbyi (strain DSM

Query: 1 VWERMSQEPP 10
VW R SQ PP
Sbjct: 59 VWARGSQNPP 68


>sp|RL31_METJA|LARGE ribosomal subunit protein eL31|Methanocaldococcus jannaschii

Query: 1 VWERMSQEPP 10
+WER Q+PP
Sbjct: 58 IWERGIQKPP 67


>sp|RL31_ARCFU|LARGE ribosomal subunit protein eL31|Archaeoglobus fulgidus (strain

Query: 1 VWERMSQEPP 10
+WER +++PP
Sbjct: 59 IWERGAEKPP 68


>sp|RL31_THEKO|LARGE ribosomal subunit protein eL31|Thermococcus kodakarensis (strain

Query: 1 VWERMSQEPP 10
+WER +++PP
Sbjct: 58 IWERGAEKPP 67


>sp|Y274_PYRHO|PUTATIVE GTPase PH0274|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WERMSQEPP 10
WE++ +PP
Sbjct: 218 WEKIGWKPP 226


>sp|SURE_NATPD|5'-NUCLEOTIDASE SurE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VWERMSQ----EPP 10
+WERM++ +PP
Sbjct: 207 IWERMAEGTIPDPP 220


>sp|RL31_THEON|LARGE ribosomal subunit protein eL31|Thermococcus onnurineus (strain

Query: 1 VWERMSQEPP 10
+WER +++PP
Sbjct: 58 LWERGTEKPP 67


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VWERMSQEPP 10
VWE M E P
Sbjct: 782 VWEAMGHEDP 791


>sp|RL31_THEGJ|LARGE ribosomal subunit protein eL31|Thermococcus gammatolerans (strain

Query: 1 VWERMSQEPP 10
+WER +++PP
Sbjct: 58 LWERGAEKPP 67


>sp|RL31_NATPD|LARGE ribosomal subunit protein eL31|Natronomonas pharaonis (strain

Query: 1 VWERMSQEPP 10
VWER +PP
Sbjct: 58 VWERGRSKPP 67


>sp|RL31_PYRFU|LARGE ribosomal subunit protein eL31|Pyrococcus furiosus (strain ATCC

Query: 1 VWERMSQEPP 10
+WER ++PP
Sbjct: 58 IWERGIEKPP 67


>sp|RL31_METKA|LARGE ribosomal subunit protein eL31|Methanopyrus kandleri (strain AV19

Query: 1 VWERMSQEPP 10
+WER ++PP
Sbjct: 56 IWERGIKKPP 65


>sp|COBD_PYRAB|PROBABLE cobalamin biosynthesis protein CobD|Pyrococcus abyssi (strain GE5

Query: 1 VWERMSQEPP 10
+W+ + EPP
Sbjct: 12 IWDLLLGEPP 21


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VWERMSQEPP 10
+WE M E P
Sbjct: 782 IWEAMGHEDP 791


>sp|RL31_PYRHO|LARGE ribosomal subunit protein eL31|Pyrococcus horikoshii (strain ATCC

Query: 1 VWERMSQEPP 10
+WER ++PP
Sbjct: 59 IWERGIEKPP 68


>sp|RL31_PYRAB|LARGE ribosomal subunit protein eL31|Pyrococcus abyssi (strain GE5 /

Query: 1 VWERMSQEPP 10
+WER ++PP
Sbjct: 58 IWERGIEKPP 67


>sp|RL31_METHJ|LARGE ribosomal subunit protein eL31|Methanospirillum hungatei JF-1

Query: 1 VWERMSQEPP 10
VW R +++PP
Sbjct: 56 VWSRGTEKPP 65


>sp|NIFK_METTM|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter marburgensis

Query: 3 ERMSQEP 9
ER+S+EP
Sbjct: 383 ERLSEEP 389


>sp|RL31_METMJ|LARGE ribosomal subunit protein eL31|Methanoculleus marisnigri (strain

Query: 1 VWERMSQEPP 10
VWE S +PP
Sbjct: 56 VWENGSSKPP 65


>sp|RL31_METB6|LARGE ribosomal subunit protein eL31|Methanoregula boonei (strain DSM

Query: 1 VWERMSQEPP 10
VW R +++PP
Sbjct: 56 VWSRGAEKPP 65


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VWERMSQEPP 10
V++R+S+E P
Sbjct: 283 VFDRLSRETP 292


>sp|RL31_STAMF|LARGE ribosomal subunit protein eL31|Staphylothermus marinus (strain

Query: 1 VWERMSQEPP 10
VW R ++PP
Sbjct: 59 VWSRSREKPP 68


>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ERMSQEPP 10
ER++ EPP
Sbjct: 204 ERITNEPP 211


>sp|UPPS_PYRFU|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 2 WERMSQEPP 10
W R ++PP
Sbjct: 48 WARKREKPP 56


>sp|UPPS_PYRHO|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrococcus

Query: 2 WERMSQEPP 10
W R ++PP
Sbjct: 48 WARKHEKPP 56


>sp|RL31_AERPE|LARGE ribosomal subunit protein eL31|Aeropyrum pernix (strain ATCC

Query: 1 VWERMSQEPP 10
+W R ++PP
Sbjct: 55 IWSRSREKPP 64




14|Sequence|66|75|SQEPPQEMAK

>sp|GATE_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina acetivorans (strain

Query: 2 QEPPQEMAK 10
+EPP+E+ K
Sbjct: 88 EEPPRELNK 96


>sp|GATE_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 2 QEPPQEMAK 10
+EPP+E+ K
Sbjct: 88 EEPPRELNK 96


>sp|PYRF_METM6|OROTIDINE 5'-phosphate decarboxylase|Methanococcus maripaludis (strain C6 /

Query: 3 EPPQEMAK 10
E P+EMAK
Sbjct: 204 ENPKEMAK 211




15|Sequence|71|80|QEMAKAQDGT

>sp|THSA_AERPE|THERMOSOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 2 EMAKAQDG 9
E+AKAQD
Sbjct: 83 EVAKAQDA 90




16|Sequence|76|85|AQDGTFSSVL

>sp|RS8E_SULTO|SMALL ribosomal subunit protein eS8|Sulfurisphaera tokodaii (strain DSM

Query: 1 AQDGTFSSVL 10
QDGT +++L
Sbjct: 116 GQDGTINAIL 125


>sp|SYI_METKA|ISOLEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 AQDGTFS 7
A+DGTF+
Sbjct: 366 AEDGTFT 372


>sp|ILVC_METST|KETOL-ACID reductoisomerase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 2 QDGTFSS 8
QDGTF++
Sbjct: 282 QDGTFAT 288


>sp|ILVC_NITMS|KETOL-ACID reductoisomerase (NADP(+))|Nitrosopumilus maritimus (strain SCM1)

Query: 2 QDGTFSS 8
QDGTF++
Sbjct: 283 QDGTFNN 289


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 3 DGTFSS 8
DGTFSS
Sbjct: 739 DGTFSS 744




17|Sequence|81|90|FSSVLTLTNL

***** No hits found ******


18|Sequence|86|95|TLTNLTGLDT

>sp|RS11_PYRIL|SMALL ribosomal subunit protein uS11|Pyrobaculum islandicum (strain DSM

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 31 TITDLTGAET 40


>sp|RS11_PYRAR|SMALL ribosomal subunit protein uS11|Pyrobaculum arsenaticum (strain

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 30 TITDLTGAET 39


>sp|RS11_PYRAE|SMALL ribosomal subunit protein uS11|Pyrobaculum aerophilum (strain

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 25 TITDLTGAET 34


>sp|RS11_METTP|SMALL ribosomal subunit protein uS11|Methanothrix thermoacetophila

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 21 TITDLTGAET 30


>sp|RS11_METKA|SMALL ribosomal subunit protein uS11|Methanopyrus kandleri (strain AV19

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 29 TITDLTGAET 38


>sp|RS11_PYRCJ|SMALL ribosomal subunit protein uS11|Pyrobaculum calidifontis (strain

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 33 TITDLTGAET 42


>sp|RS11_METHJ|SMALL ribosomal subunit protein uS11|Methanospirillum hungatei JF-1

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 23 TVTDLTGAET 32


>sp|RS11_METAR|SMALL ribosomal subunit protein uS11|Methanocella arvoryzae (strain DSM

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 24 TVTDLTGAET 33


>sp|RS11_METBU|SMALL ribosomal subunit protein uS11|Methanococcoides burtonii (strain

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 21 TVTDLTGAET 30


>sp|GCSPB_STAMF|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Staphylothermus

Query: 2 LTNLTGLD 9
L N+TG+D
Sbjct: 129 LANITGMD 136


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 2 LTNLTGL 8
LTNLTG+
Sbjct: 296 LTNLTGV 302


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LTNLTGL 8
LTNLTG+
Sbjct: 296 LTNLTGV 302


>sp|RS11_HALWD|SMALL ribosomal subunit protein uS11|Haloquadratum walsbyi (strain DSM

Query: 1 TLTNLTGLDT 10
T+T+LTG +T
Sbjct: 26 TVTDLTGAET 35


>sp|REG7_PYRHO|HTH-TYPE transcriptional regulator LrpA|Pyrococcus horikoshii (strain ATCC

Query: 1 TLTNLTGLDT 10
+L +TG+DT
Sbjct: 63 SLVTITGVDT 72


>sp|REG7_PYRFU|HTH-TYPE transcriptional regulator LrpA|Pyrococcus furiosus (strain ATCC

Query: 1 TLTNLTGLDT 10
+L +TG+DT
Sbjct: 63 SLVTITGVDT 72


>sp|REG7_PYRAB|HTH-TYPE transcriptional regulator LrpA|Pyrococcus abyssi (strain GE5 /

Query: 1 TLTNLTGLDT 10
+L +TG+DT
Sbjct: 63 SLVTITGVDT 72


>sp|SEPS_META3|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TNLTGLDT 10
TNLT +DT
Sbjct: 465 TNLTYIDT 472


>sp|RS11_METS3|SMALL ribosomal subunit protein uS11|Methanobrevibacter smithii (strain

Query: 1 TLTNLTGLDT 10
T+T++TG +T
Sbjct: 22 TVTDITGAET 31


>sp|RS11_METMA|SMALL ribosomal subunit protein uS11|Methanosarcina mazei (strain ATCC

Query: 1 TLTNLTGLDT 10
T+T++TG +T
Sbjct: 21 TVTDITGAET 30


>sp|RS11_METBF|SMALL ribosomal subunit protein uS11|Methanosarcina barkeri (strain

Query: 1 TLTNLTGLDT 10
T+T++TG +T
Sbjct: 21 TVTDITGAET 30


>sp|RS11_METAC|SMALL ribosomal subunit protein uS11|Methanosarcina acetivorans (strain

Query: 1 TLTNLTGLDT 10
T+T++TG +T
Sbjct: 21 TVTDITGAET 30


>sp|RS11_METST|SMALL ribosomal subunit protein uS11|Methanosphaera stadtmanae (strain

Query: 1 TLTNLTGLDT 10
T+T++TG +T
Sbjct: 22 TVTDITGAET 31




19|Sequence|91|100|TGLDTGEYFC

>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GLDTGEY 8
G+D+GEY
Sbjct: 342 GIDSGEY 348


>sp|SYE_THEON|GLUTAMATE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 GLDTGEYF 9
G+D G+YF
Sbjct: 346 GIDEGKYF 353


>sp|Y1151_METJA|UNCHARACTERIZED protein MJ1151|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GLDTGEYF 9
++TGEYF
Sbjct: 84 AIETGEYF 91


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 DTGEYFC 10
+TGEY C
Sbjct: 24 ETGEYVC 30


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 TGLDTGEYF 9
TG+ T EY+
Sbjct: 305 TGMTTAEYY 313


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 2 GLDTGEYFC 10
GL++G Y C
Sbjct: 961 GLESGLYIC 969


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GLDTGEY 8
G+DTG Y
Sbjct: 90 GMDTGSY 96


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TGLDTGEYF 9
TG++TG Y+
Sbjct: 697 TGVETGTYY 705


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 3 LDTGEYFC 10
L+TG+ FC
Sbjct: 16 LNTGKLFC 23


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 3 LDTGEYFC 10
L+TG+ FC
Sbjct: 13 LNTGKLFC 20


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GLDTGEYF 9
GLD EYF
Sbjct: 198 GLDGTEYF 205


>sp|PELO_METB6|PROTEIN pelota homolog|Methanoregula boonei (strain DSM 21154

Query: 2 GLDTGEY 8
G+DTG Y
Sbjct: 90 GMDTGAY 96


>sp|BAST_HALS3|TRANSDUCER protein BasT|Halobacterium salinarum (strain ATCC 29341

Query: 1 TGLDTGEY 8
TG+D G Y
Sbjct: 256 TGMDDGRY 263


>sp|TRPA_METBF|TRYPTOPHAN synthase alpha chain|Methanosarcina barkeri (strain Fusaro /

Query: 2 GLDTGEYF 9
G+DT YF
Sbjct: 77 GMDTQRYF 84


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 TGLDTGEYF 9
TGL EYF
Sbjct: 795 TGLSPTEYF 803


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 TGLDTGE 7
+G+DTGE
Sbjct: 116 SGVDTGE 122


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 1 TGLDTGEYF 9
TGL T +Y+
Sbjct: 133 TGLSTSKYY 141


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 1 TGLDTGEYF 9
TGL T +Y+
Sbjct: 133 TGLSTSKYY 141


>sp|RIFK_METAR|RIBOFLAVIN kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 TGLDTGEYF 9
TGL G+Y+
Sbjct: 100 TGLGEGQYY 108


>sp|ECFA_METAC|ENERGY-COUPLING factor transporter ATP-binding protein|Methanosarcina acetivorans

Query: 2 GLDTGEY 8
G+DTG++
Sbjct: 63 GMDTGDF 69


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 GLDTGEY 8
G+D GEY
Sbjct: 736 GIDDGEY 742


>sp|RIFK_METBU|RIBOFLAVIN kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TGLDTGEYF 9
TGL G+Y+
Sbjct: 98 TGLGEGQYY 106




20|Sequence|96|105|GEYFCTHNDS

>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 GEYFCTHND 9
GEY HND
Sbjct: 740 GEYVRVHND 748


>sp|PRIS_METM6|DNA primase small subunit PriS|Methanococcus maripaludis (strain C6 /

Query: 5 CTHNDS 10
CTH+DS
Sbjct: 114 CTHDDS 119


>sp|PRIS_METM5|DNA primase small subunit PriS|Methanococcus maripaludis (strain C5 /

Query: 5 CTHNDS 10
CTH+DS
Sbjct: 114 CTHDDS 119


>sp|Y783_METJA|UNCHARACTERIZED protein MJ0783|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GEYFCTHND 9
G + CTH D
Sbjct: 39 GSHLCTHID 47


>sp|PRIS_METM7|DNA primase small subunit PriS|Methanococcus maripaludis (strain C7 /

Query: 5 CTHNDS 10
CTH+DS
Sbjct: 114 CTHDDS 119


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GEYFCT 6
GEY CT
Sbjct: 26 GEYICT 31


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC

Query: 1 GEYFCT 6
GEY CT
Sbjct: 25 GEYICT 30


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 1 GEYFCT 6
GEY CT
Sbjct: 29 GEYICT 34


>sp|PRIS_METMP|DNA primase small subunit PriS|Methanococcus maripaludis (strain DSM

Query: 5 CTHNDS 10
CTH+DS
Sbjct: 114 CTHDDS 119


>sp|AMZA_SULAC|ARCHAEMETZINCIN acidocaldarius (strain ATCC 33909

Query: 1 GEYFCT 6
G+YFCT
Sbjct: 160 GKYFCT 165


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei

Query: 1 GEYFCTHN 8
G++FC N
Sbjct: 59 GQFFCEDN 66


>sp|PUR2_METAR|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 GEYFCTHN 8
GE+ C H+
Sbjct: 407 GEFHCRHD 414


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 2 EYFCTHN 8
E+F THN
Sbjct: 236 EWFVTHN 242


>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 1 GEYFCTHN 8
G Y+ THN
Sbjct: 26 GYYYYTHN 33


>sp|PURL_HALWD|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GEYFCTHND 9
G Y CT D
Sbjct: 350 GNYVCTFGD 358




21|Sequence|101|110|THNDSRGLET

>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HNDSRGLE 9
H+D+RGLE
Sbjct: 7 HSDTRGLE 14


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 THNDSRGLET 10
TH D RG++T
Sbjct: 351 THFDYRGIKT 360


>sp|EF2_PICTO|ELONGATION factor 2|Picrophilus torridus (strain ATCC 700027

Query: 1 THNDSRGL 8
TH+++RGL
Sbjct: 529 THDEARGL 536


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus (strain

Query: 1 THNDSRGLET 10
TH+ SRG T
Sbjct: 116 THSSSRGTPT 125


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 THNDSRGLET 10
+H D G+ET
Sbjct: 229 SHRDVEGVET 238


>sp|SYP_METBU|PROLINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 THNDSRGL 8
TH D +GL
Sbjct: 275 THGDDKGL 282


>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 THNDSRGLE 9
T+ND GLE
Sbjct: 136 TYNDIGGLE 144




22|Sequence|106|115|RGLETDERKR

>sp|RIBA_PICTO|GTP cyclohydrolase-2|Picrophilus torridus (strain ATCC 700027

Query: 1 RGLETDERK 9
+GL DERK
Sbjct: 119 QGLPVDERK 127


>sp|DAPAL_PYRAB|UNCHARACTERIZED DapA-like lyase PYRAB12600|Pyrococcus abyssi (strain GE5 /

Query: 3 LETDERK 9
L TDERK
Sbjct: 50 LNTDERK 56


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 RGLETDER 8
RG+E DER
Sbjct: 151 RGIEEDER 158


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 1 RGLETDER 8
RGL DER
Sbjct: 30 RGLSNDER 37


>sp|PDXS_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Aeropyrum pernix (strain ATCC

Query: 1 RGLETDERKR 10
RGL +ER R
Sbjct: 214 RGLSAEERLR 223




23|Sequence|111|120|DERKRLYIFV

>sp|RL7A_METAR|LARGE ribosomal subunit protein eL8|Methanocella arvoryzae (strain DSM

Query: 1 DERKRLYIFV 10
DE+K Y+FV
Sbjct: 71 DEKKIPYVFV 80


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DERKRLYIFV 10
DER +Y+F+
Sbjct: 925 DERSGIYLFI 934


>sp|RL7A_METBF|LARGE ribosomal subunit protein eL8|Methanosarcina barkeri (strain

Query: 1 DERKRLYIFV 10
+E+K YIF+
Sbjct: 69 EEKKAPYIFI 78


>sp|RL7A_METAC|LARGE ribosomal subunit protein eL8|Methanosarcina acetivorans (strain

Query: 1 DERKRLYIFV 10
+E+K YIF+
Sbjct: 69 EEKKAPYIFI 78


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RKRLYIF 9
RK+LY+F
Sbjct: 61 RKQLYVF 67




24|Sequence|116|125|LYIFVPDPTV

>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 YIFVPDPTV 10
Y FVPDP V
Sbjct: 418 YFFVPDPVV 426


>sp|SYE_METB6|GLUTAMATE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 YIFVPDP 8
Y FVPDP
Sbjct: 411 YFFVPDP 417


>sp|SYE_METMJ|GLUTAMATE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 YIFVPDP 8
Y FVPDP
Sbjct: 409 YFFVPDP 415


>sp|TRM1_SACS2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus solfataricus

Query: 3 IFVPDPT 9
IFVPDPT
Sbjct: 13 IFVPDPT 19


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 YIFVPDP 8
YI VPDP
Sbjct: 555 YILVPDP 561


>sp|TPSP_THETK|BIFUNCTIONAL trehalose-6-phosphate synthase/phosphatase|Thermoproteus tenax

Query: 1 LYIFVPDPTV 10
LY F+P PT+
Sbjct: 349 LYRFIPSPTL 358


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YIFVPDPTV 10
+ FVPDP +
Sbjct: 409 FFFVPDPVL 417


>sp|ACSA_METSH|ACETYL-COENZYME A synthetase|Methanothrix soehngenii (Methanosaeta concilii)

Query: 2 YIFVPDPT 9
YI++P+PT
Sbjct: 120 YIWIPEPT 127


>sp|GATB_METS3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanobrevibacter smithii (strain ATCC

Query: 2 YIFVPDP 8
Y F+PDP
Sbjct: 245 YRFIPDP 251


>sp|TRM1_SACI3|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 IFVPDP 8
IFVPDP
Sbjct: 13 IFVPDP 18


>sp|TRM1_SACI7|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 IFVPDP 8
IFVPDP
Sbjct: 13 IFVPDP 18


>sp|TRM1_SACI1|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 IFVPDP 8
IFVPDP
Sbjct: 13 IFVPDP 18


>sp|TRM1_SACI6|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 IFVPDP 8
IFVPDP
Sbjct: 13 IFVPDP 18


>sp|TRM1_SACI4|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 IFVPDP 8
IFVPDP
Sbjct: 13 IFVPDP 18


>sp|TRM1_SACI2|TRNA (guanine(26)-N(2))-dimethyltransferase|Saccharolobus islandicus

Query: 3 IFVPDP 8
IFVPDP
Sbjct: 13 IFVPDP 18


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 1 LYIFVPDPTV 10
LY++VPD +
Sbjct: 551 LYVYVPDEQI 560


>sp|IF2P_PYRAR|PROBABLE translation initiation factor IF-2|Pyrobaculum arsenaticum (strain

Query: 1 LYIFVPD 7
LY++VPD
Sbjct: 552 LYVYVPD 558


>sp|IF2P_PYRAE|PROBABLE translation initiation factor IF-2|Pyrobaculum aerophilum (strain

Query: 1 LYIFVPD 7
LY++VPD
Sbjct: 552 LYVYVPD 558


>sp|SYE_KORCO|GLUTAMATE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 YIFVPDP 8
Y+FVP+P
Sbjct: 413 YMFVPNP 419


>sp|IF2P_PYRNV|PROBABLE translation initiation factor IF-2|Pyrobaculum neutrophilum (strain

Query: 1 LYIFVPD 7
LY++VPD
Sbjct: 551 LYVYVPD 557


>sp|SYE_THEPD|GLUTAMATE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 YIFVPDP 8
Y+FVP+P
Sbjct: 417 YMFVPEP 423


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 2 YIFVPDPTV 10
Y ++PDP +
Sbjct: 259 YRYIPDPDI 267


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LYIFVPDPT 9
+Y+ VPD T
Sbjct: 537 MYVLVPDVT 545


>sp|MUTS_NATPD|DNA mismatch repair protein MutS|Natronomonas pharaonis (strain ATCC

Query: 4 FVPDPT 9
FVP+PT
Sbjct: 605 FVPNPT 610


>sp|IF2P_PYRCJ|PROBABLE translation initiation factor IF-2|Pyrobaculum calidifontis (strain

Query: 1 LYIFVPD 7
LY+++PD
Sbjct: 553 LYVYIPD 559


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 YIFVPDPTV 10
Y ++PDP +
Sbjct: 249 YRYIPDPDI 257


>sp|EF1B_STAMF|ELONGATION factor 1-beta|Staphylothermus marinus (strain ATCC 43588

Query: 1 LYIFVPDPT 9
LYIF+P+ T
Sbjct: 53 LYIFMPEET 61


>sp|T2M6_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 YIFVPDPTV 10
Y+F+PD V
Sbjct: 107 YLFLPDADV 115


>sp|IF2P_METMP|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 LYIFVPDP 8
LY+ VP+P
Sbjct: 552 LYVEVPEP 559


>sp|IF2P_METM6|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 LYIFVPDP 8
LY+ VP+P
Sbjct: 552 LYVEVPEP 559


>sp|IF2P_METM5|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 LYIFVPDP 8
LY+ VP+P
Sbjct: 552 LYVEVPEP 559


>sp|IF2P_METM7|PROBABLE translation initiation factor IF-2|Methanococcus maripaludis

Query: 1 LYIFVPDP 8
LY+ VP+P
Sbjct: 552 LYVEVPEP 559


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 5 VPDPTV 10
+PDPT+
Sbjct: 776 IPDPTI 781


>sp|GATB_METM5|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C5 /

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 256 YRYIPDP 262


>sp|GATB_METM6|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C6 /

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 256 YRYIPDP 262


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 256 YRYIPDP 262


>sp|GATB_METM7|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain C7 /

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 256 YRYIPDP 262


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YIFVPDP 8
Y+FV DP
Sbjct: 414 YMFVADP 420


>sp|GATB_AERPE|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Aeropyrum pernix (strain ATCC 700893

Query: 2 YIFVPDP 8
Y++ PDP
Sbjct: 276 YLYFPDP 282


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 2 YIFVPDP 8
YIF+ DP
Sbjct: 82 YIFILDP 88


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 245 YRYIPDP 251


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YIFVPDPTV 10
Y+F DP +
Sbjct: 412 YLFTKDPNI 420


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 256 YRYIPDP 262


>sp|GATB_METTH|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanothermobacter thermautotrophicus

Query: 2 YIFVPDP 8
Y ++PDP
Sbjct: 245 YRYIPDP 251


>sp|PORD_PYRAB|PYRUVATE synthase subunit PorD|Pyrococcus abyssi (strain GE5 /

Query: 2 YIFVPDPTV 10
YI+ P+P +
Sbjct: 60 YIYCPEPAI 68


>sp|PORD_PYRHO|PYRUVATE synthase subunit PorD|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YIFVPDPTV 10
YI+ P+P +
Sbjct: 60 YIYCPEPAI 68


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YIFVPD 7
Y FVPD
Sbjct: 411 YFFVPD 416


>sp|PORD_PYRFU|PYRUVATE synthase subunit PorD|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YIFVPDPTV 10
YI+ P+P +
Sbjct: 60 YIYCPEPAI 68


>sp|NFI_HALMA|ENDONUCLEASE V|Haloarcula marismortui (strain ATCC 43049

Query: 4 FVPDPTV 10
FVPDP++
Sbjct: 10 FVPDPSL 16


>sp|URED_HALMA|UREASE accessory protein UreD|Haloarcula marismortui (strain ATCC 43049

Query: 4 FVPDPTV 10
+VP+PT+
Sbjct: 132 YVPEPTI 138


>sp|PIMT_METHJ|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 YIFVPDP 8
++FVP+P
Sbjct: 36 HLFVPEP 42


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 2 YIFVPDPT 9
Y+FV +PT
Sbjct: 135 YVFVGEPT 142




25|Sequence|121|130|PDPTVGFLPN

>sp|CAS1_HALVD|CRISPR-ASSOCIATED endonuclease Cas1|Haloferax volcanii (strain ATCC 29605

Query: 2 DPTVGFL 8
DPTVGF+
Sbjct: 216 DPTVGFV 222


>sp|SYH_HALMA|HISTIDINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 PDPTVGFLP 9
P P VGF P
Sbjct: 308 PTPAVGFAP 316


>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 DPTVGFLPN 10
+P V FLPN
Sbjct: 344 EPNVAFLPN 352


>sp|ATGT_METJA|TRNA-GUANINE(15) transglycosylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DPTVGFLP 9
DP GF+P
Sbjct: 428 DPVFGFIP 435


>sp|RS13_METMA|SMALL ribosomal subunit protein uS13|Methanosarcina mazei (strain ATCC

Query: 1 PDPTVGFLPN 10
P T+G+LP+
Sbjct: 63 PTATLGYLPD 72


>sp|RS13_METBF|SMALL ribosomal subunit protein uS13|Methanosarcina barkeri (strain

Query: 1 PDPTVGFLPN 10
P T+G+LP+
Sbjct: 63 PTATLGYLPD 72


>sp|TRUB_AERPE|PROBABLE tRNA pseudouridine synthase B|Aeropyrum pernix (strain ATCC

Query: 2 DPTVGFLPN 10
DP G+LP+
Sbjct: 38 DPRYGYLPH 46


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PDPTVGFLP 9
P+PT F P
Sbjct: 275 PEPTAAFFP 283


>sp|CAS1B_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DPTVGFL 8
DP VGFL
Sbjct: 208 DPYVGFL 214


>sp|RS13_METAR|SMALL ribosomal subunit protein uS13|Methanocella arvoryzae (strain DSM

Query: 1 PDPTVGFLP 9
P T+G+LP
Sbjct: 112 PHATMGYLP 120


>sp|SYR_HALWD|ARGININE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DPTVGFLPN 10
DP G LPN
Sbjct: 107 DPGYGHLPN 115


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PDPTVGF 7
P P VGF
Sbjct: 302 PSPAVGF 308


>sp|SYH_METM7|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 PDPTVGF 7
P P VGF
Sbjct: 304 PSPAVGF 310


>sp|SYH_METM6|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 PDPTVGF 7
P P VGF
Sbjct: 304 PSPAVGF 310


>sp|SYH_METM5|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 PDPTVGF 7
P P VGF
Sbjct: 304 PSPAVGF 310


>sp|RBL_THEON|RIBULOSE bisphosphate carboxylase|Thermococcus onnurineus (strain NA1)

Query: 1 PDPTVGFLP 9
P P VG+ P
Sbjct: 162 PKPKVGYSP 170


>sp|RBL_THEKO|RIBULOSE bisphosphate carboxylase|Thermococcus kodakarensis (strain ATCC

Query: 1 PDPTVGFLP 9
P P VG+ P
Sbjct: 162 PKPKVGYSP 170


>sp|CAS1_THEPD|CRISPR-ASSOCIATED endonuclease Cas1|Thermofilum pendens (strain DSM 2475

Query: 2 DPTVGFL 8
DPT GFL
Sbjct: 214 DPTYGFL 220


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 2 DPTVGFLP 9
DP +G+ P
Sbjct: 142 DPVIGYKP 149


>sp|METXA_NATPD|HOMOSERINE O-acetyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 DPTVGFLP 9
DP GF P
Sbjct: 249 DPAAGFFP 256


>sp|RRP41_CENSY|EXOSOME complex component Rrp41|Cenarchaeum symbiosum (strain A)

Query: 2 DPTVGFLPN 10
D VG++PN
Sbjct: 186 DMPVGYMPN 194


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DPTVGFLP 9
+PT G++P
Sbjct: 164 EPTAGYVP 171


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 DPTVGFLP 9
+PT G++P
Sbjct: 164 EPTAGYVP 171


>sp|RRP41_PYRCJ|EXOSOME complex component Rrp41|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 DPTVGFLPN 10
D VG++PN
Sbjct: 184 DMPVGYMPN 192


>sp|RRP41_PYRNV|EXOSOME complex component Rrp41|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 DPTVGFLPN 10
D VG++PN
Sbjct: 184 DLPVGYMPN 192


>sp|RL3_METHJ|LARGE ribosomal subunit protein uL3|Methanospirillum hungatei JF-1

Query: 2 DPTVGFL 8
+PT+GF+
Sbjct: 324 EPTIGFI 330


>sp|RRP41_PYRAR|EXOSOME complex component Rrp41|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 DPTVGFLPN 10
D VG++PN
Sbjct: 184 DLPVGYMPN 192


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DPTVGFLPN 10
D VG+ PN
Sbjct: 176 DDVVGYCPN 184


>sp|RRP41_PYRIL|EXOSOME complex component Rrp41|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DPTVGFLPN 10
D VG++PN
Sbjct: 184 DLPVGYMPN 192




26|Sequence|126|135|GFLPNDAEEL

>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 GFLPNDAE 8
GF+PND E
Sbjct: 606 GFVPNDTE 613


>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 GFLPNDAE 8
GF+PND E
Sbjct: 617 GFVPNDTE 624


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 GFLPNDAE 8
GF+PND E
Sbjct: 617 GFVPNDTE 624


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 GFLPNDAE 8
GF+PND E
Sbjct: 617 GFVPNDTE 624


>sp|Y992_IGNH4|MEMO1 family protein Igni_0992|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FLPNDAEEL 10
F P DAEEL
Sbjct: 12 FYPADAEEL 20


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 2 FLPNDAEEL 10
F P+D+EEL
Sbjct: 11 FYPDDSEEL 19


>sp|ARGB_METHJ|ACETYLGLUTAMATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PNDAEEL 10
P DAEEL
Sbjct: 228 PQDAEEL 234


>sp|MUTS_METTP|DNA mismatch repair protein MutS|Methanothrix thermoacetophila (strain

Query: 1 GFLPND 6
GF+PND
Sbjct: 584 GFVPND 589


>sp|GLYA_NITMS|SERINE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 FLPNDAEEL 10
F P DAEE+
Sbjct: 146 FYPFDAEEM 154


>sp|CDC63_SULAC|ORC1-TYPE DNA replication protein 3|Sulfolobus acidocaldarius (strain ATCC

Query: 2 FLPNDAEEL 10
F P DAE+L
Sbjct: 203 FKPYDAEQL 211


>sp|FTSZ_THEAC|CELL division protein FtsZ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GFLPNDAE 8
G LP DAE
Sbjct: 26 GSLPEDAE 33


>sp|CDC63_SULTO|ORC1-TYPE DNA replication protein 3|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 FLPNDAEEL 10
F P DAE+L
Sbjct: 203 FKPYDAEQL 211


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 GFLPND 6
GF+PND
Sbjct: 607 GFVPND 612


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 GFLPND 6
GF+PND
Sbjct: 607 GFVPND 612


>sp|CDC63_SACS2|ORC1-TYPE DNA replication protein 3|Saccharolobus solfataricus (strain ATCC

Query: 2 FLPNDAEEL 10
F P DAE+L
Sbjct: 204 FKPYDAEQL 212


>sp|Y924_METJA|UNCHARACTERIZED ATP-binding protein MJ0924|Methanocaldococcus jannaschii (strain

Query: 1 GFLPNDAEEL 10
GF+ N AE+L
Sbjct: 174 GFIINKAEDL 183


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 FLPNDAEEL 10
F+P+ AEEL
Sbjct: 758 FVPHIAEEL 766


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 FLPNDAEE 9
FLP D+E+
Sbjct: 291 FLPKDSED 298


>sp|SYS_METBF|SERINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LPNDAEEL 10
L NDAEE+
Sbjct: 298 LTNDAEEI 305


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 FLPNDAEE 9
FLP D+E+
Sbjct: 297 FLPKDSED 304


>sp|GLCDH_HALSA|GLUCOSE 1-dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GFLPNDAEEL 10
G P DA+EL
Sbjct: 50 GGFPEDADEL 59


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 FLPNDAEE 9
FLP D+E+
Sbjct: 300 FLPKDSED 307


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 FLPNDA 7
F+PNDA
Sbjct: 596 FVPNDA 601


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 FLPNDA 7
F+PNDA
Sbjct: 596 FVPNDA 601


>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GFLPNDAEEL 10
GF DAEE+
Sbjct: 480 GFTEADAEEI 489


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GFLPNDAEEL 10
GF DAEE+
Sbjct: 481 GFTEADAEEI 490


>sp|RUXX_METTH|PUTATIVE snRNP Sm-like protein|Methanothermobacter thermautotrophicus

Query: 5 NDAEEL 10
NDAEEL
Sbjct: 52 NDAEEL 57


>sp|PELO_HALWD|PROTEIN pelota homolog|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFLPNDAEE 9
GF DAEE
Sbjct: 201 GFTKQDAEE 209




27|Sequence|131|140|DAEELFIFLT

>sp|Y1363_METJA|UNCHARACTERIZED protein MJ1363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DAEELFIFLT 10
DAE+ +FLT
Sbjct: 41 DAEQYNVFLT 50




28|Sequence|136|145|FIFLTEITEI

>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 1 FIFLTEITE 9
F LTE+TE
Sbjct: 227 FAMLTEVTE 235


>sp|KAE1B_METMP|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIFLTEITE 9
F LTEITE
Sbjct: 235 FSMLTEITE 243


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIFLTEITE 9
F LTEITE
Sbjct: 228 FSMLTEITE 236


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIFLTEITE 9
F LTEITE
Sbjct: 234 FSMLTEITE 242


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIFLTEITE 9
F LTEITE
Sbjct: 234 FSMLTEITE 242


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIFLTEITE 9
F LTEITE
Sbjct: 234 FSMLTEITE 242


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 FIFLTEITE 9
F LTEITE
Sbjct: 234 FSMLTEITE 242


>sp|RLMH_METLZ|PUTATIVE ribosomal RNA large subunit|Methanocorpusculum labreanum (strain

Query: 2 IFLTEITEI 10
IF+TE+ E+
Sbjct: 33 IFITELAEV 41




29|Sequence|141|150|EITEITIPCR

>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 ITEITIPC 9
+ EIT+PC
Sbjct: 496 VDEITVPC 503


>sp|PRIS_SULAC|DNA primase small subunit PriS|Sulfolobus acidocaldarius (strain ATCC

Query: 1 EITEITIPC 9
EI+EIT+ C
Sbjct: 131 EISEITVDC 139


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 ITEITIPC 9
+ ++TIPC
Sbjct: 496 VDQVTIPC 503


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 ITEITIPC 9
+ +ITIPC
Sbjct: 499 VDDITIPC 506


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 ITEITIPC 9
+ ++TIPC
Sbjct: 501 VDKVTIPC 508


>sp|BIOW_METVM|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 5 ITIPCR 10
ITIPC+
Sbjct: 69 ITIPCK 74


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 ITEITIPC 9
+ ++TIPC
Sbjct: 501 VDKLTIPC 508


>sp|RF1_METVS|PEPTIDE chain release factor subunit|Methanococcus vannielii (strain ATCC

Query: 1 EITEITIPC 9
E+T +TI C
Sbjct: 325 ELTRVTIKC 333




30|Sequence|146|155|TIPCRVTDPQ

>sp|SPEH_PICTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Picrophilus torridus (strain ATCC 700027

Query: 5 RVTDPQ 10
R+TDPQ
Sbjct: 122 RITDPQ 127


>sp|TBP_META3|TATA-BOX-BINDING protein|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 CRVTDPQ 10
CR++DP+
Sbjct: 44 CRLSDPK 50


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 3 PCRVTDP 9
P R+TDP
Sbjct: 75 PDRITDP 81


>sp|TBP_METTL|TATA-BOX-BINDING protein|Methanothermococcus thermolithotrophicus

Query: 4 CRVTDPQ 10
CR++DP+
Sbjct: 44 CRLSDPK 50


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 PCRVTD 8
PCR+T+
Sbjct: 62 PCRITE 67


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 PCRVTD 8
PCR+T+
Sbjct: 53 PCRITE 58


>sp|TBP_METVS|TATA-BOX-BINDING protein|Methanococcus vannielii (strain ATCC 35089

Query: 4 CRVTDPQ 10
CR++DP+
Sbjct: 44 CRLSDPK 50


>sp|TBP_METM7|TATA-BOX-BINDING protein|Methanococcus maripaludis (strain C7 /

Query: 4 CRVTDPQ 10
CR++DP+
Sbjct: 44 CRLSDPK 50


>sp|GLNA2_HALMT|GAMMA-GLUTAMYLPUTRESCINE synthetase|Haloferax mediterranei (strain ATCC 33500

Query: 3 PCRVTDPQ 10
PC +TD Q
Sbjct: 374 PCDLTDAQ 381


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 TIPCRVTDP 9
TI CR DP
Sbjct: 22 TIRCRGIDP 30


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 2 IPCRVTDPQ 10
I C VTD Q
Sbjct: 123 INCEVTDTQ 131


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 2 IPCRVTDPQ 10
I C VTD Q
Sbjct: 157 INCEVTDTQ 165




31|Sequence|151|160|VTDPQLVVTL

>sp|RL40_IGNH4|LARGE ribosomal subunit protein eL40|Ignicoccus hospitalis (strain

Query: 1 VTDPQLV 7
VTDP+LV
Sbjct: 3 VTDPELV 9


>sp|RL40_AERPE|LARGE ribosomal subunit protein eL40|Aeropyrum pernix (strain ATCC

Query: 1 VTDPQLV 7
+TDP+LV
Sbjct: 3 ITDPELV 9


>sp|EF1A_METVS|ELONGATION factor 1-alpha|Methanococcus vannielii (strain ATCC 35089

Query: 3 DPQLVVTL 10
DPQL+V L
Sbjct: 35 DPQLIVRL 42


>sp|EF1A_METM7|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C7 /

Query: 3 DPQLVVTL 10
DPQL+V L
Sbjct: 35 DPQLIVRL 42


>sp|EF1A_METVA|ELONGATION factor 1-alpha|Methanococcus vannielii

Query: 3 DPQLVVTL 10
DPQL+V L
Sbjct: 35 DPQLIVRL 42


>sp|EF1A_METM5|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C5 /

Query: 3 DPQLVVTL 10
DPQL+V L
Sbjct: 35 DPQLIVRL 42


>sp|EF1A_METMP|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain DSM 14266

Query: 3 DPQLVVTL 10
DPQL+V L
Sbjct: 35 DPQLIVRL 42


>sp|RS7_METB6|SMALL ribosomal subunit protein uS7|Methanoregula boonei (strain DSM

Query: 1 VTDPQLV 7
VTDP LV
Sbjct: 33 VTDPSLV 39


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VTDPQLV 7
VTDPQ+V
Sbjct: 731 VTDPQIV 737


>sp|Y1554_METJA|UNCHARACTERIZED protein MJ1554|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDPQLVVTL 10
TDP LV+ L
Sbjct: 455 TDPLLVIDL 463


>sp|AK_METJA|PROBABLE aspartokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDPQLVVT 9
TDP+LV T
Sbjct: 238 TDPRLVPT 245


>sp|SPEH_PICTO|S-ADENOSYLMETHIONINE decarboxylase proenzyme|Picrophilus torridus (strain ATCC 700027

Query: 1 VTDPQLVV 8
+TDPQ+++
Sbjct: 123 ITDPQMML 130


>sp|EF1A_METM6|ELONGATION factor 1-alpha|Methanococcus maripaludis (strain C6 /

Query: 3 DPQLVVTL 10
DPQL+V L
Sbjct: 35 DPQLIVRL 42




32|Sequence|156|165|LVVTLHEKKG

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 LVVTLHEKKG 10
LVV LHE+ G
Sbjct: 259 LVVPLHERFG 268


>sp|AMPPA_METAR|AMP phosphorylase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VTLHEKKG 10
V LH+KKG
Sbjct: 450 VILHKKKG 457


>sp|COBQ_METMA|PROBABLE cobyric acid synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LVVTLHEKKG 10
LV L+EKKG
Sbjct: 439 LVRYLYEKKG 448




33|Sequence|161|170|HEKKGDVALP

>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EKKGDVALP 10
E+ GDV+LP
Sbjct: 36 EQMGDVSLP 44


>sp|AGMT_PYRHO|AGMATINASE horikoshii (strain ATCC 700860

Query: 5 GDVALP 10
GDVALP
Sbjct: 74 GDVALP 79


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 EKKGDVALP 10
E+ GD++LP
Sbjct: 36 EELGDISLP 44


>sp|RL4_THEVO|LARGE ribosomal subunit protein uL4|Thermoplasma volcanium (strain ATCC

Query: 2 EKKGDVALP 10
EK+G++ LP
Sbjct: 13 EKRGEIDLP 21


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HEKKGDVALP 10
HE KG LP
Sbjct: 1112 HEHKGGATLP 1121


>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 1 HEKKGDVALP 10
H K GDV P
Sbjct: 108 HHKIGDVTTP 117


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HEKKGDV 7
HE+KG+V
Sbjct: 318 HEQKGEV 324




34|Sequence|166|175|DVALPVPYDH

>sp|Y2010_ARCFU|UNCHARACTERIZED protein AF_2010|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DVALPVPYD 9
+V +P+PYD
Sbjct: 199 EVDVPIPYD 207


>sp|FRHB_METVO|COENZYME F420 hydrogenase subunit beta|Methanococcus voltae

Query: 1 DVALPVPY 8
++ LPVPY
Sbjct: 273 ELGLPVPY 280


>sp|GGGPS_HYPBU|GERANYLGERANYLGLYCERYL phosphate synthase|Hyperthermus butylicus (strain DSM 5456

Query: 3 ALPVPYDH 10
ALP+PY++
Sbjct: 145 ALPIPYEN 152


>sp|FRHB_METJA|COENZYME F420 hydrogenase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 DVALPVPY 8
++ LP+PY
Sbjct: 280 ELGLPIPY 287


>sp|SYR_SULTO|ARGININE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DVALPVP 7
DV+LP+P
Sbjct: 40 DVSLPLP 46


>sp|COBQ_METVO|PROBABLE cobyric acid synthase|Methanococcus voltae

Query: 1 DVALPVPYD 9
DVA +PYD
Sbjct: 219 DVAGLIPYD 227


>sp|DPHB_HALWD|DIPHTHINE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VALPVPYDH 10
V LP PY H
Sbjct: 133 VTLPFPYAH 141


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 VALPVPY 8
VA+P PY
Sbjct: 1176 VAVPTPY 1182


>sp|AROE_HALLT|SHIKIMATE dehydrogenase (NADP(+))|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 ALPVPYDH 10
A PVP DH
Sbjct: 200 ATPVPADH 207


>sp|Y2513_HALS3|UPF0173 metal-dependent hydrolase OE_2513F|Halobacterium salinarum (strain

Query: 1 DVALPVPYD 9
DVA P+ YD
Sbjct: 192 DVAFPMHYD 200


>sp|Y1038_HALSA|UPF0173 metal-dependent hydrolase VNG_1038C|Halobacterium salinarum (strain

Query: 1 DVALPVPYD 9
DVA P+ YD
Sbjct: 192 DVAFPMHYD 200


>sp|TYSY_HALVO|THYMIDYLATE synthase|Haloferax volcanii (Halobacterium volcanii)

Query: 1 DVALPVPYD 9
D+AL VP++
Sbjct: 199 DIALGVPFN 207




35|Sequence|171|180|VPYDHQRGFS

>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 PYDHQRGF 9
P DH+RGF
Sbjct: 443 PTDHKRGF 450


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 1 VPYDHQRGFS 10
+ YDH GFS
Sbjct: 485 ISYDHAEGFS 494


>sp|SYE_METAR|GLUTAMATE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 2 PYDHQRGF 9
P DH+RGF
Sbjct: 443 PQDHKRGF 450


>sp|PPS_METHJ|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VPYDHQRGF 9
+P DH RG
Sbjct: 132 IPLDHDRGL 140


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 2 PYDHQR 7
P+DH+R
Sbjct: 134 PWDHER 139


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain

Query: 1 VPYDHQ 6
+PY+HQ
Sbjct: 19 IPYNHQ 24


>sp|AMPPA_METMJ|AMP phosphorylase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 PYDHQRGF 9
PYDH G
Sbjct: 444 PYDHGAGL 451


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 VPYDHQRGF 9
+PY+ + GF
Sbjct: 1385 IPYNSEEGF 1393


>sp|AATK_SULTO|A-TYPE ATP synthase subunit K|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 PYDHQRGF 9
PYD +GF
Sbjct: 25 PYDTAQGF 32


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 VPYDHQRGF 9
VP+D + GF
Sbjct: 101 VPFDGEEGF 109


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 5 HQRGFS 10
HQRGF+
Sbjct: 203 HQRGFT 208


>sp|CAS6_PYRHO|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VPYDHQ 6
VPY+HQ
Sbjct: 19 VPYNHQ 24


>sp|PPS_METMA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VPYDHQR 7
+P+DH R
Sbjct: 4 IPHDHPR 10


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PYDHQRG 8
P DH RG
Sbjct: 443 PTDHSRG 449


>sp|CAS6_PYRFU|CRISPR-ASSOCIATED endoribonuclease Cas6|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VPYDHQ 6
VPY+HQ
Sbjct: 18 VPYNHQ 23


>sp|GATA_METHJ|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanospirillum hungatei JF-1 (strain

Query: 2 PYDHQR 7
P DHQR
Sbjct: 102 PLDHQR 107


>sp|SYP_THEVO|PROLINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VPYDHQRGF 9
V ++H RGF
Sbjct: 74 VEFEHIRGF 82


>sp|SYP_THEAC|PROLINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 VPYDHQRGF 9
V ++H RGF
Sbjct: 74 VEFEHIRGF 82


>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium vallismortis)

Query: 3 YDHQRGFS 10
YD++ GFS
Sbjct: 316 YDNEYGFS 323


>sp|IPYR_METKA|INORGANIC pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 3 YDHQRGF 9
YD +RGF
Sbjct: 34 YDEERGF 40




36|Sequence|176|185|QRGFSGIFED

>sp|Y835_ARCFU|UNCHARACTERIZED protein AF_0835|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RGFSGIFE 9
RGFS IFE
Sbjct: 74 RGFSSIFE 81


>sp|Y1189_METJA|UNCHARACTERIZED protein MJ1189|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RGFSGIFE 9
+GFSG FE
Sbjct: 183 KGFSGFFE 190


>sp|DUT_METBF|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 1 QRGFSGIFED 10
++G+SGI+++
Sbjct: 158 EKGYSGIYQN 167


>sp|HEM3_IGNH4|PROBABLE porphobilinogen deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 QRGFSGIFE 9
+RG +G+FE
Sbjct: 54 KRGLTGLFE 62


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 QRGFSGIF 8
+RG SGIF
Sbjct: 330 KRGVSGIF 337


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QRGFSGIFE 9
Q+GF+ +FE
Sbjct: 309 QKGFNTMFE 317


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QRGFSGIFED 10
Q+GF G++ D
Sbjct: 181 QQGFCGVYLD 190


>sp|NRPR2_METMA|GLOBAL nitrogen regulator NrpRII|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 GFSGIFE 9
GFSGI E
Sbjct: 186 GFSGILE 192


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 QRGFSGIFED 10
Q+ F G F+D
Sbjct: 57 QKKFKGFFKD 66


>sp|GATE_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanothermobacter thermautotrophicus

Query: 1 QRGFSGIF 8
+RG SGIF
Sbjct: 330 KRGVSGIF 337


>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RGFSGIFE 9
RGF+ I+E
Sbjct: 59 RGFTSIYE 66


>sp|TRMY_HALMA|TRNA (pseudouridine(54)-N(1))-methyltransferase|Haloarcula marismortui

Query: 1 QRGFSGIFED 10
+RGF G +D
Sbjct: 109 RRGFEGTLDD 118


>sp|Y951_METJA|UNCHARACTERIZED protein MJ0951|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FSGIFED 10
FSG FED
Sbjct: 235 FSGKFED 241


>sp|DPO4_SACS2|DNA polymerase IV|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 FSGIFED 10
FSG FED
Sbjct: 33 FSGRFED 39


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 2 RGFSGIF 8
+GF GIF
Sbjct: 316 KGFKGIF 322


>sp|HIS4_THEKO|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Thermococcus kodakarensis (strain

Query: 1 QRGFSGIF 8
+RGFSG+
Sbjct: 201 ERGFSGVI 208


>sp|DUT_METMA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 1 QRGFSGIFED 10
+ G+SG++++
Sbjct: 158 EEGYSGVYQN 167


>sp|DUT_METAC|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Methanosarcina

Query: 1 QRGFSGIFED 10
+ G+SG++++
Sbjct: 158 EEGYSGVYQN 167


>sp|Y655_ARCFU|METALLOPROTEASE AF_0655|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QRGFSGIFE 9
+ GF GIFE
Sbjct: 40 KNGFWGIFE 48




37|Sequence|181|190|GIFEDRSYIC

>sp|HIS2_METBF|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 3 FEDRSYIC 10
+++RSY+C
Sbjct: 23 YDERSYVC 30


>sp|DADD_METM5|5'-DEOXYADENOSINE deaminase|Methanococcus maripaludis (strain C5 /

Query: 1 GIFEDRSYIC 10
G FED + IC
Sbjct: 232 GFFEDVTTIC 241


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GIFEDRS 7
G FEDRS
Sbjct: 417 GFFEDRS 423


>sp|PUS10_PYRAR|TRNA pseudouridine synthase Pus10|Pyrobaculum arsenaticum (strain DSM

Query: 4 EDRSYIC 10
E+R YIC
Sbjct: 86 EERCYIC 92


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GIFEDRS 7
G++EDRS
Sbjct: 414 GLYEDRS 420


>sp|AGL5_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl5|Haloferax volcanii

Query: 2 IFEDRSYI 9
++EDR Y+
Sbjct: 115 VYEDRPYV 122


>sp|PAN2_METJA|PROTEASOME-ACTIVATING nucleotidase 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GIFEDRSYI 9
I EDR Y+
Sbjct: 338 AILEDRDYV 346


>sp|SYE_METM6|GLUTAMATE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 4 EDRSYIC 10
ED YIC
Sbjct: 544 EDNGYIC 550


>sp|G1PDH_METTH|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 GIFEDRSYIC 10
G+ ED IC
Sbjct: 17 GVIEDTGRIC 26


>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 IFEDRSYIC 10
+FE YIC
Sbjct: 60 LFEKNGYIC 68


>sp|BSUHB_THEKO|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE kodakarensis (strain ATCC BAA-918

Query: 1 GIFEDRSYI 9
G+F+ R+Y+
Sbjct: 189 GVFDIRNYV 197


>sp|COME_METTH|SULFOPYRUVATE decarboxylase subunit beta|Methanothermobacter thermautotrophicus

Query: 1 GIFEDRSYIC 10
G+ ED IC
Sbjct: 14 GVLEDELVIC 23




38|Sequence|186|195|RSYICKTTIG

>sp|HIS2_METBF|PHOSPHORIBOSYL-ATP pyrophosphatase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RSYICK 6
RSY+CK
Sbjct: 26 RSYVCK 31


>sp|MNTP_METS3|MANGANESE exporter MntP|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 YICKTTI 9
YIC TTI
Sbjct: 57 YICGTTI 63


>sp|RL21_STAMF|LARGE ribosomal subunit protein eL21|Staphylothermus marinus (strain

Query: 1 RSYICKTTIG 10
++YI K T+G
Sbjct: 72 KAYIVKITLG 81




39|Sequence|191|200|KTTIGDREVD

>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KTTIGDREVD 10
K T+GDRE D
Sbjct: 630 KVTVGDRECD 639


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTTIGDREV 9
KTTIGD+EV
Sbjct: 321 KTTIGDKEV 329


>sp|BACS2_HALSA|SENSORY rhodopsin-2|Halobacterium salinarum (strain ATCC 700922

Query: 2 TTIGDREV 9
TT+GDR V
Sbjct: 59 TTVGDRTV 66


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 IGDREVD 10
IGDREV+
Sbjct: 559 IGDREVE 565


>sp|Y632_METM7|MEMO1 family protein MmarC7_0632|Methanococcus maripaludis (strain C7 /

Query: 1 KTTIGDREVD 10
KT GD E+D
Sbjct: 102 KTPFGDMEID 111


>sp|Y191_METM5|MEMO1 family protein MmarC5_0191|Methanococcus maripaludis (strain C5 /

Query: 1 KTTIGDREVD 10
KT GD E+D
Sbjct: 102 KTPFGDMEID 111


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 1 KTTIGDREV 9
K+T+G+RE+
Sbjct: 205 KSTLGEREI 213


>sp|Y1286_METM6|MEMO1 family protein MmarC6_1286|Methanococcus maripaludis (strain C6 /

Query: 1 KTTIGDREVD 10
KT GD E+D
Sbjct: 102 KTPFGDMEID 111


>sp|Y1387_METMP|MEMO1 family protein MMP1387|Methanococcus maripaludis (strain DSM 14266

Query: 1 KTTIGDREVD 10
KT GD E+D
Sbjct: 102 KTPFGDMEID 111


>sp|BRIX_METMA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina mazei

Query: 4 IGDREVD 10
IGD+E+D
Sbjct: 132 IGDKEID 138


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KTTIGD 6
KTTIGD
Sbjct: 353 KTTIGD 358


>sp|HIS1_ARCFU|ATP phosphoribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 KTTIGDREV 9
K +GDREV
Sbjct: 69 KEKVGDREV 77


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 IGDREV 9
IGDREV
Sbjct: 435 IGDREV 440




40|Sequence|196|205|DREVDSDAYY

>sp|UPP_METVS|URACIL phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 1 DREVDSDAY 9
DRE++ D Y
Sbjct: 195 DRELNKDGY 203


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 REVDSDAYY 10
REV DA+Y
Sbjct: 222 REVKPDAFY 230


>sp|DAPAL_PYRFU|UNCHARACTERIZED DapA-like lyase PF0657|Pyrococcus furiosus (strain ATCC 43587

Query: 2 REVDSDAYY 10
RE+ S AYY
Sbjct: 63 RELTSKAYY 71


>sp|SURE2_PYRAE|5'-NUCLEOTIDASE SurE 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 EVDSDAYY 10
E D+DAYY
Sbjct: 204 EPDTDAYY 211


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 3 EVDSDAYY 10
EVD D YY
Sbjct: 526 EVDKDEYY 533


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 VDSDAYY 10
VDSD YY
Sbjct: 544 VDSDLYY 550




41|Sequence|201|210|SDAYYVYRLQ

>sp|PYRB_PICTO|ASPARTATE carbamoyltransferase catalytic subunit|Picrophilus torridus (strain

Query: 1 SDAYYVYRLQ 10
SD +YV R+Q
Sbjct: 219 SDVFYVTRIQ 228


>sp|TRUB_PYRNV|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum neutrophilum (strain DSM

Query: 1 SDAYYVYR 8
+DAYY++R
Sbjct: 209 ADAYYIWR 216


>sp|TRUB_PYRIL|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum islandicum (strain DSM

Query: 1 SDAYYVYR 8
+DAYY++R
Sbjct: 209 ADAYYIWR 216


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SDAYYVYRL 9
++AY+VYRL
Sbjct: 54 TNAYFVYRL 62


>sp|Y1120_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1120|Methanocaldococcus

Query: 2 DAYYVYRL 9
D+Y++YRL
Sbjct: 135 DSYWIYRL 142


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SDAYYVYRL 9
S AYY Y+L
Sbjct: 136 SIAYYAYKL 144


>sp|TRUB_PYRAR|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum arsenaticum (strain DSM

Query: 1 SDAYYVYR 8
+DAYY+++
Sbjct: 209 ADAYYIWK 216


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 SDAYYVYR 8
+DAYY+++
Sbjct: 209 ADAYYIWK 216


>sp|SYD_PYRHO|ASPARTATE--TRNA(ASP) ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SDAYYVYR 8
+D Y++YR
Sbjct: 323 ADLYFIYR 330


>sp|DPO4_SULTO|DNA polymerase IV|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 SDAYYVYRL 9
+ A+Y+YRL
Sbjct: 220 AKAFYLYRL 228


>sp|TRUB_PYRAE|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum aerophilum (strain ATCC

Query: 1 SDAYYVYR 8
+DAYY+++
Sbjct: 209 ADAYYIWK 216


>sp|AROC_METM7|CHORISMATE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 SDAYYVY 7
+DAY++Y
Sbjct: 273 NDAYHIY 279


>sp|NIKMN_ARCFU|PUTATIVE fused nickel transport protein|Archaeoglobus fulgidus (strain ATCC

Query: 3 AYYVYR 8
YYVYR
Sbjct: 118 GYYVYR 123


>sp|HFLX_THEPD|GTPASE HflX|Thermofilum pendens (strain DSM 2475

Query: 2 DAYYVY 7
DAYY Y
Sbjct: 157 DAYYAY 162


>sp|MBLFP_SULTO|METALLO-BETA-LACTAMASE fold-containing protein ST1585|Sulfurisphaera tokodaii (strain DSM

Query: 2 DAYYVY 7
D YYVY
Sbjct: 107 DLYYVY 112




42|Sequence|206|215|VYRLQVSSIN

***** No hits found ******


43|Sequence|211|220|VSSINVSVNA

>sp|MTXH_METBF|PUTATIVE methyltransferase mtx subunit H|Methanosarcina barkeri (strain

Query: 2 SSINVSVNA 10
+SIN+S+NA
Sbjct: 128 NSINMSINA 136




44|Sequence|216|225|VSVNAVQTVV

>sp|PSB1_DESA1|PROTEASOME subunit beta 1|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 VSVNAVQTVV 10
++VNAV+TV+
Sbjct: 162 LAVNAVKTVI 171




45|Sequence|221|230|VQTVVRQGEN

>sp|RTCA_SACI4|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 VQTVVRQGE 9
+QT VRQGE
Sbjct: 220 IQTDVRQGE 228


>sp|RTCA_SACI3|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 VQTVVRQGE 9
+QT VRQGE
Sbjct: 220 IQTDVRQGE 228


>sp|RTCA_SACI6|RNA 3'-terminal phosphate cyclase|Saccharolobus islandicus (strain

Query: 1 VQTVVRQGE 9
+QT VRQGE
Sbjct: 220 IQTDVRQGE 228


>sp|K6PF_METAC|ADP-SPECIFIC phosphofructokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TVVRQGEN 10
+V+R+GEN
Sbjct: 328 SVIRKGEN 335


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 4 VVRQGEN 10
VVR GEN
Sbjct: 278 VVRDGEN 284


>sp|TRPE2_HALMA|ANTHRANILATE synthase component 1 2|Haloarcula marismortui (strain ATCC 43049

Query: 4 VVRQGEN 10
VVRQGE+
Sbjct: 203 VVRQGED 209


>sp|RL3_METMJ|LARGE ribosomal subunit protein uL3|Methanoculleus marisnigri (strain

Query: 1 VQTVVRQGEN 10
+++ +RQGE+
Sbjct: 311 IRSAIRQGEH 320


>sp|PURL_PYRCJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VQTVVRQGE 9
V+TVV+ GE
Sbjct: 404 VRTVVKPGE 412


>sp|Y531_METJA|UNIVERSAL stress protein MJ0531|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VQTVVRQGEN 10
+ +++R GEN
Sbjct: 15 LNSIIRNGEN 24


>sp|COPZ_ARCFU|COPPER chaperone CopZ|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QTVVRQGE 9
QTV R+GE
Sbjct: 51 QTVFRKGE 58


>sp|SECY_HALMA|PROTEIN translocase subunit SecY|Haloarcula marismortui (strain ATCC 43049

Query: 1 VQTVVRQGE 9
+QTV+ QGE
Sbjct: 237 LQTVLLQGE 245




46|Sequence|226|235|RQGENITLMC

>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC

Query: 1 RQGENITLM 9
R+GENI +M
Sbjct: 78 RKGENIAVM 86


>sp|PUR2_METM7|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C7 /

Query: 3 GENITLM 9
GENIT M
Sbjct: 209 GENITFM 215


>sp|PUR2_METM6|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus maripaludis (strain C6 /

Query: 3 GENITLM 9
GENIT M
Sbjct: 209 GENITFM 215


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 RQGENITL 8
R+GE ITL
Sbjct: 201 REGEKITL 208


>sp|AROA_METLZ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocorpusculum labreanum (strain ATCC

Query: 1 RQGENITL 8
R GEN+T+
Sbjct: 280 RDGENVTI 287


>sp|KAE1_METTP|TRNA N6-adenosine threonylcarbamoyltransferase|Methanothrix

Query: 1 RQGENITLMC 10
R GE + LMC
Sbjct: 258 RLGEMLRLMC 267


>sp|QUEC_SULAC|7-CYANO-7-DEAZAGUANINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RQGENITLM 9
RQG +TL+
Sbjct: 261 RQGHEVTLL 269


>sp|METK_METBF|S-ADENOSYLMETHIONINE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RQGENITL 8
R GE+ITL
Sbjct: 201 RDGEDITL 208


>sp|METXA_HALLT|HOMOSERINE O-acetyltransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 GENITLMC 10
G+N+ L+C
Sbjct: 39 GDNVVLVC 46


>sp|CBIT_METTH|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 3 GENITLM 9
G+N+TLM
Sbjct: 81 GDNVTLM 87




47|Sequence|231|240|ITLMCIVIGN

>sp|Y1239_METJA|UNCHARACTERIZED protein MJ1239|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 MCIVIGN 10
+C+V+GN
Sbjct: 78 LCVVLGN 84


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 1 ITLMCIVIGN 10
+TL C+++ N
Sbjct: 264 VTLGCLIVSN 273


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LMCIVIGN 10
L CI +GN
Sbjct: 305 LCCITLGN 312




48|Sequence|236|245|IVIGNEVVNF

>sp|G1PDH_METBU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcoides burtonii (strain DSM

Query: 1 IVIGNEVVN 9
+VIGN V+N
Sbjct: 20 VVIGNGVIN 28


>sp|PYCB_METJA|PYRUVATE carboxylase subunit B|Methanocaldococcus jannaschii (strain ATCC

Query: 2 VIGNEVVNF 10
+I NEVVN+
Sbjct: 359 IITNEVVNY 367


>sp|PURA_THEVO|ADENYLOSUCCINATE synthetase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 IVIGNEVVNF 10
+V+GNE F
Sbjct: 52 VVVGNETYKF 61


>sp|ARLMC_PYRHO|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus horikoshii

Query: 1 IVIGNEVV 8
+V+GNEV+
Sbjct: 230 LVLGNEVI 237


>sp|TTH_ACIAM|TETRATHIONATE hydrolase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 IVIGNEVVNF 10
IV+ N++ NF
Sbjct: 366 IVVDNDIANF 375




49|Sequence|241|250|EVVNFEWTYP

>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 1 EVVNFEWTY 9
EVVN +W Y
Sbjct: 227 EVVNKDWAY 235


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 FEWTYP 10
F WTYP
Sbjct: 323 FGWTYP 328


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 FEWTYP 10
F WTYP
Sbjct: 323 FGWTYP 328


>sp|SYE_HALMA|GLUTAMATE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 5 FEWTYP 10
F+W YP
Sbjct: 326 FDWEYP 331


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 5 FEWTYP 10
F+W YP
Sbjct: 331 FDWEYP 336


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 VNFEWTYP 10
+N +W YP
Sbjct: 268 INSDWRYP 275


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 VVNFEWTYP 10
++NFE YP
Sbjct: 537 ILNFELGYP 545


>sp|SYE_NATPD|GLUTAMATE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 FEWTYP 10
F+W YP
Sbjct: 326 FDWEYP 331


>sp|CHEB_METBU|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcoides

Query: 1 EVVNFEWTYP 10
EV+N W P
Sbjct: 145 EVINGNWNCP 154


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 FEWTYP 10
FEWT P
Sbjct: 199 FEWTVP 204


>sp|RL30_ARCFU|LARGE ribosomal subunit protein uL30|Archaeoglobus fulgidus (strain ATCC

Query: 2 VVNFEWTYP 10
+ N +W YP
Sbjct: 125 IKNIKWHYP 133


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VNFEWTYP 10
+N +W YP
Sbjct: 268 INSDWRYP 275


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVNFEWTY 9
+VNF W +
Sbjct: 404 IVNFAWAF 411


>sp|SYM_METAR|METHIONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 VNFEWT 8
+NF WT
Sbjct: 374 INFSWT 379




50|Sequence|246|255|EWTYPRKESG

>sp|RS4E_METKA|SMALL ribosomal subunit protein eS4|Methanopyrus kandleri (strain AV19

Query: 2 WTYPRKESG 10
W PRKE G
Sbjct: 21 WPIPRKEGG 29


>sp|Y1548_ARCFU|UNCHARACTERIZED protein AF_1548|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WTYPRKE 8
W+YP KE
Sbjct: 100 WSYPEKE 106


>sp|FTTA_CENSY|TRANSCRIPTION termination factor FttA|Cenarchaeum symbiosum (strain A)

Query: 2 WTYPRKES 9
W +PR E+
Sbjct: 374 WNFPRVET 381


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EWTYPRKE 8
++ YPRKE
Sbjct: 446 DYIYPRKE 453


>sp|Y2310_ARCFU|MEMO1 family protein AF_2310|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EWTYPRKE 8
E+TYP K+
Sbjct: 24 EYTYPAKD 31


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EWTYPRKE 8
++T+PRKE
Sbjct: 524 DFTHPRKE 531


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 WTYPRKESG 10
W+ P +E+G
Sbjct: 134 WSMPNREAG 142


>sp|RL22_SULTO|LARGE ribosomal subunit protein uL22|Sulfurisphaera tokodaii (strain

Query: 2 WTYPR 6
WTYP+
Sbjct: 4 WTYPK 8


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 EWTYPRK 7
+W YPR+
Sbjct: 271 DWRYPRQ 277


>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EWTYPRK 7
+W YPR+
Sbjct: 271 DWRYPRQ 277


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WTYPR 6
WTYP+
Sbjct: 325 WTYPK 329


>sp|RS4E_PYRAE|SMALL ribosomal subunit protein eS4|Pyrobaculum aerophilum (strain ATCC

Query: 2 WTYPRKES 9
WT RK+S
Sbjct: 199 WTLKRKQS 206


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 WTYPR 6
WTYP+
Sbjct: 325 WTYPK 329




51|Sequence|251|260|RKESGRLVEP

>sp|TRM56_NATPD|TRNA (cytidine(56)-2'-O)-methyltransferase|Natronomonas pharaonis

Query: 2 KESGRLVEP 10
KE+G+ VEP
Sbjct: 168 KETGKRVEP 176


>sp|NFI_THEVO|BIFUNCTIONAL methyltransferase/endonuclease|Thermoplasma volcanium (strain ATCC

Query: 2 KESGRLVE 9
+E+GRL+E
Sbjct: 271 EEAGRLIE 278


>sp|RS19E_METTH|SMALL ribosomal subunit protein eS19|Methanothermobacter

Query: 1 RKESGRLVEP 10
R+E+GR++ P
Sbjct: 113 REENGRVITP 122


>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KESGRLVE 9
KE+G+LVE
Sbjct: 11 KENGKLVE 18


>sp|Y1654_METJA|UNCHARACTERIZED protein MJ1654|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KESGRLVEP 10
KESG + EP
Sbjct: 209 KESGDIFEP 217


>sp|SYFA_THEON|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus onnurineus (strain NA1)

Query: 1 RKESGRLV 8
RKE G+LV
Sbjct: 118 RKEDGKLV 125


>sp|UVRC_NATPD|UVRABC system protein C|Natronomonas pharaonis (strain ATCC 35678

Query: 1 RKESGRLVE 9
R E G+LVE
Sbjct: 267 RSEDGKLVE 275


>sp|SYFA_THEKO|PHENYLALANINE--TRNA ligase alpha subunit|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RKESGRLV 8
RKE G+LV
Sbjct: 118 RKEDGKLV 125


>sp|RL7A_ARCFU|LARGE ribosomal subunit protein eL8|Archaeoglobus fulgidus (strain ATCC

Query: 1 RKESGRLVE 9
RKE G LVE
Sbjct: 104 RKELGSLVE 112


>sp|PSA_METMP|PROTEASOME subunit alpha|Methanococcus maripaludis (strain DSM 14266

Query: 2 KESGRLVE 9
K+SG+LVE
Sbjct: 217 KDSGKLVE 224




52|Sequence|256|265|RLVEPVTDFL

>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 RLVEPVTDF 9
R EP+TDF
Sbjct: 5119 RGFEPITDF 5127


>sp|GUAAB_THEAC|GMP synthase [glutamine-hydrolyzing] subunit B|Thermoplasma acidophilum

Query: 1 RLVEPVTDF 9
+LVEP+ DF
Sbjct: 158 KLVEPLRDF 166


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VEPVTDFL 10
+EPVTD L
Sbjct: 447 IEPVTDVL 454


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VEPVTDFL 10
+EPVTD L
Sbjct: 447 IEPVTDVL 454


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 VEPVTDFL 10
+EPVTD L
Sbjct: 447 IEPVTDVL 454


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RLVEPVTDFL 10
R P+TD+L
Sbjct: 106 RRTAPITDYL 115


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 4 EPVTDFL 10
EPV DFL
Sbjct: 68 EPVIDFL 74


>sp|HIS4_METMJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanoculleus marisnigri (strain

Query: 3 VEPVTDFL 10
+EPVT+ L
Sbjct: 178 IEPVTELL 185


>sp|CBIG_METJA|PROBABLE cobalt-precorrin-5A hydrolase|Methanocaldococcus jannaschii

Query: 3 VEPVTDF 9
VEP+ DF
Sbjct: 32 VEPIKDF 38


>sp|GUAAB_PICTO|GMP synthase [glutamine-hydrolyzing] subunit B|Picrophilus torridus

Query: 1 RLVEPVTDF 9
RLVEP+ D
Sbjct: 157 RLVEPLRDL 165


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 1 RLVEPVTDFL 10
+++EP+ +FL
Sbjct: 75 KVIEPILEFL 84


>sp|MPTA_PYRHO|GTP cyclohydrolase MptA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RLVEPVTD 8
RLVE +TD
Sbjct: 63 RLVESITD 70


>sp|MPTA_PYRAB|GTP cyclohydrolase MptA|Pyrococcus abyssi (strain GE5 /

Query: 1 RLVEPVTD 8
RLVE +TD
Sbjct: 60 RLVESITD 67


>sp|APBC_PYRHO|IRON-SULFUR cluster carrier protein|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LVEPVTDFL 10
++ P TDF+
Sbjct: 97 MIPPTTDFM 105


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLVEPVTDFL 10
+++ PV DF+
Sbjct: 247 KVISPVDDFI 256




53|Sequence|261|270|VTDFLLDMPY

>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TDFLLDMPY 10
TDF LD PY
Sbjct: 118 TDFQLDEPY 126


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 3 DFLLDMPY 10
D LLD+P+
Sbjct: 303 DLLLDLPW 310


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 3 DFLLDM 8
DFLLDM
Sbjct: 142 DFLLDM 147


>sp|CDC6O_HALMA|ORC1-TYPE DNA replication protein 15|Haloarcula marismortui (strain ATCC

Query: 1 VTDFLLD 7
VTD+LLD
Sbjct: 65 VTDYLLD 71


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 5 LLDMPY 10
LLD+PY
Sbjct: 186 LLDLPY 191


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VTDFLLDMPY 10
+ D+L+ +PY
Sbjct: 38 LIDYLISLPY 47


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 2 TDFLLDMPY 10
TD LD PY
Sbjct: 138 TDGYLDTPY 146


>sp|HIS8_METKA|HISTIDINOL-PHOSPHATE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VTDFLLDMPY 10
+ D+L D PY
Sbjct: 88 IIDYLADPPY 97


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 5 LLDMPY 10
LLD+PY
Sbjct: 37 LLDLPY 42


>sp|SYY_METTH|TYROSINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VTDFLLDM 8
V+D+L+DM
Sbjct: 301 VSDYLVDM 308




54|Sequence|266|275|LDMPYHIRSI

>sp|DCD_THEAC|DCTP deaminase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DMPYHIRS 9
+ PYHIRS
Sbjct: 133 EKPYHIRS 140


>sp|RL24_THEPD|LARGE ribosomal subunit protein uL24|Thermofilum pendens (strain DSM

Query: 2 DMPYHIRS 9
D P HIRS
Sbjct: 19 DAPLHIRS 26


>sp|SUCC_PYRIL|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum islandicum (strain

Query: 5 YHIRSI 10
YHIRSI
Sbjct: 150 YHIRSI 155


>sp|Y1281_METJA|UNCHARACTERIZED protein MJ1281|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDMPYHIRSI 10
++MPY+++++
Sbjct: 712 IEMPYNVKAV 721


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 1 LDMPYHI 7
L MPYHI
Sbjct: 58 LVMPYHI 64


>sp|G1PDH_ARCFU|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDMPYHI 7
+D+PYH+
Sbjct: 6 VDLPYHV 12


>sp|PURA_METTP|ADENYLOSUCCINATE synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 MPYHI 7
MPYHI
Sbjct: 103 MPYHI 107


>sp|PURA_METMA|ADENYLOSUCCINATE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 MPYHI 7
MPYHI
Sbjct: 106 MPYHI 110


>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 3 MPYHI 7
MPYHI
Sbjct: 106 MPYHI 110


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 MPYHI 7
MPYHI
Sbjct: 106 MPYHI 110


>sp|SERC_METMA|PHOSPHOSERINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDMPYH 6
+D+PYH
Sbjct: 174 MDIPYH 179


>sp|SERC_METBF|PHOSPHOSERINE aminotransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDMPYH 6
+D+PYH
Sbjct: 174 MDIPYH 179


>sp|SERC_METAC|PHOSPHOSERINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LDMPYH 6
+D+PYH
Sbjct: 174 MDIPYH 179


>sp|SUCC_PYRCJ|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum calidifontis (strain

Query: 5 YHIRSI 10
YH+RSI
Sbjct: 150 YHVRSI 155


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 5 YHIRSI 10
YH+RSI
Sbjct: 150 YHVRSI 155


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 5 YHIRSI 10
YH+RSI
Sbjct: 150 YHVRSI 155


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 LDMPYHIRSI 10
+DMPY ++ +
Sbjct: 895 VDMPYTVKGV 904


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 LDMPYHIRSI 10
+DMPY ++ +
Sbjct: 895 VDMPYTVKGV 904


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 3 MPYHI 7
MPYH+
Sbjct: 106 MPYHV 110


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 LDMPYHIRSI 10
LD+PY ++ +
Sbjct: 187 LDLPYSVKGM 196


>sp|Y1290_METJA|UNCHARACTERIZED protein MJ1290|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PYHIRS 9
PYHI+S
Sbjct: 79 PYHIKS 84


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 LDMPYHIR 8
LD+PY +R
Sbjct: 38 LDLPYLVR 45


>sp|TIAS_CALMQ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Caldivirga maquilingensis

Query: 2 DMPYHI 7
D PYHI
Sbjct: 210 DSPYHI 215


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DMPYHIRSI 10
D+ +H+RS+
Sbjct: 180 DLVHHVRSL 188




55|Sequence|271|280|HIRSILHIPS

>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 1 HIRSILHIP 9
H+RSIL +P
Sbjct: 301 HVRSILGLP 309


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 1 HIRSILHIP 9
H+RSIL +P
Sbjct: 304 HLRSILGLP 312


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 3 RSILHIPS 10
RSI++IPS
Sbjct: 16 RSIIYIPS 23


>sp|TRPF_METJA|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HIRSILHIP 9
HI ++HIP
Sbjct: 111 HIIKVIHIP 119


>sp|RS19_THEVO|SMALL ribosomal subunit protein uS19|Thermoplasma volcanium (strain

Query: 1 HIRSILHIPS 10
H+R ++ +PS
Sbjct: 85 HVRDVIILPS 94




56|Sequence|276|285|LHIPSAELED

>sp|GSA_SULTO|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 HIPSAE 7
HIPSAE
Sbjct: 98 HIPSAE 103


>sp|RRP42_METTH|EXOSOME complex component Rrp42|Methanothermobacter thermautotrophicus

Query: 2 HIPSAELED 10
IP+AE+ED
Sbjct: 166 RIPAAEVED 174


>sp|HIS1_PYRIL|ATP phosphoribosyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LHIPSAELED 10
L++P+ +LED
Sbjct: 215 LNVPATKLED 224


>sp|SYE_METHJ|GLUTAMATE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LHIPSAELE 9
L++P AELE
Sbjct: 450 LYLPKAELE 458


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 2 HIPSAELED 10
++PS LED
Sbjct: 337 YVPSPNLED 345


>sp|PYRI_THEVO|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma volcanium

Query: 1 LHIPSAELE 9
+H+PS+++E
Sbjct: 46 MHVPSSKME 54




57|Sequence|281|290|AELEDSGTYT

>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 AELEDSGT 8
AELE SGT
Sbjct: 32 AELESSGT 39


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AELEDSGTY 9
AE+ED G Y
Sbjct: 324 AEVEDDGLY 332


>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AELEDSG 7
AELED G
Sbjct: 43 AELEDEG 49


>sp|PANB_SACS2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|PANB_SACI1|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|ENO_METKA|ENOLASE kandleri (strain AV19 /

Query: 4 EDSGTY 9
EDSGTY
Sbjct: 252 EDSGTY 257


>sp|PANB_SACI7|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|PANB_SACI6|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|PANB_SACI4|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|PANB_SACI3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|PANB_SACI2|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 ELEDSGTYT 10
ELED+G ++
Sbjct: 170 ELEDAGVFS 178


>sp|SPSS_METVS|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ELEDSG 7
ELEDSG
Sbjct: 149 ELEDSG 154




58|Sequence|286|295|SGTYTCNVTE

>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 1 SGTYTCN 7
+GTY CN
Sbjct: 136 AGTYVCN 142


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SGTYTCN 7
+GTY CN
Sbjct: 136 AGTYVCN 142


>sp|RL2_METPE|LARGE ribosomal subunit protein uL2|Methanosphaerula palustris (strain

Query: 1 SGTYTCNV 8
+G+Y CN+
Sbjct: 102 TGSYICNI 109


>sp|PCP_THELN|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus litoralis (strain ATCC 51850

Query: 1 SGTYTCN 7
+GTY CN
Sbjct: 138 AGTYLCN 144


>sp|PCP_PYRHO|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 SGTYTCN 7
+GTY CN
Sbjct: 134 AGTYLCN 140


>sp|PCP_PYRAB|PYRROLIDONE-CARBOXYLATE peptidase|Pyrococcus abyssi (strain GE5 /

Query: 1 SGTYTCN 7
+GTY CN
Sbjct: 137 AGTYLCN 143


>sp|RL2_SACS2|LARGE ribosomal subunit protein uL2|Saccharolobus solfataricus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_SACI7|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_SACI6|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_SACI4|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_SACI3|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_SACI2|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_SACI1|LARGE ribosomal subunit protein uL2|Saccharolobus islandicus (strain

Query: 2 GTYTCNVTE 10
GT CNV E
Sbjct: 101 GTIVCNVEE 109


>sp|RL2_METB6|LARGE ribosomal subunit protein uL2|Methanoregula boonei (strain DSM

Query: 1 SGTYTCNV 8
+G+Y CN+
Sbjct: 101 TGSYICNI 108


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 SGTYTCNVTE 10
SG+YT +TE
Sbjct: 508 SGSYTVTITE 517


>sp|RL2_METMJ|LARGE ribosomal subunit protein uL2|Methanoculleus marisnigri (strain

Query: 2 GTYTCNV 8
G Y CN+
Sbjct: 102 GAYVCNI 108


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YTCNVT 9
Y CNVT
Sbjct: 214 YLCNVT 219


>sp|HIS5_PICTO|IMIDAZOLE glycerol phosphate synthase subunit|Picrophilus torridus (strain

Query: 2 GTYTCNVT 9
G+YTC T
Sbjct: 139 GSYTCGKT 146


>sp|SYC_NANEQ|CYSTEINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 YTCNVT 9
YTC VT
Sbjct: 26 YTCGVT 31


>sp|AMZA_HALWD|ARCHAEMETZINCIN walsbyi (strain DSM 16790

Query: 2 GTYTCNVT 9
G Y C+VT
Sbjct: 25 GVYECDVT 32


>sp|CSG1_HALHT|CELL surface glycoprotein 1|Haloarcula hispanica (strain ATCC 33960

Query: 1 SGTYTCNVT 9
+G+Y+ NVT
Sbjct: 428 AGSYSMNVT 436


>sp|KTHY_META3|PROBABLE thymidylate kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SGTYTCNVT 9
+G YTC T
Sbjct: 27 NGIYTCEPT 35


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SGTYTC 6
SGTY C
Sbjct: 159 SGTYIC 164




59|Sequence|291|300|CNVTESVNDH

>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CNVTESVNDH 10
CNV SVND+
Sbjct: 667 CNVRISVNDY 676


>sp|Y1859_ARCFU|UNCHARACTERIZED protein AF_1859|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CNVTESVND 9
CN+ +SV+D
Sbjct: 49 CNICKSVDD 57


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 CNVTESVND 9
C V E VND
Sbjct: 186 CGVEEEVND 194


>sp|PMDHL_METJA|PHOSPHOMEVALONATE dehydratase large subunit|Methanocaldococcus jannaschii (strain

Query: 1 CNVTESVND 9
C V E VND
Sbjct: 260 CRVKEVVND 268


>sp|AROA_SACS2|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 3 VTESVNDH 10
VT+ +NDH
Sbjct: 363 VTDCLNDH 370




60|Sequence|296|305|SVNDHQDEKA

>sp|PORA_METJA|PYRUVATE synthase subunit PorA|Methanocaldococcus jannaschii (strain ATCC

Query: 3 NDHQDEKA 10
NDHQD A
Sbjct: 122 NDHQDSIA 129


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 2 VNDHQDEK 9
+ND+ DEK
Sbjct: 439 LNDYYDEK 446


>sp|CCA_THEAI|CCA-ADDING enzyme|Thermoplasma acidophilum

Query: 2 VNDHQDEKA 10
VN H DEK
Sbjct: 139 VNGHLDEKG 147


>sp|MFNB_META3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SVNDHQDEK 9
S+ DH DEK
Sbjct: 159 SLFDHLDEK 167




61|Sequence|301|310|QDEKAINITV

>sp|CBIT_SACI7|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|CBIT_SACI6|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|CBIT_SACI4|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|CBIT_SACI3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|CBIT_SACI2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|CBIT_SACS2|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|CBIT_SACI1|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 QDEKAINIT 9
++EKAIN+T
Sbjct: 73 KEEKAINLT 81


>sp|TRUA_PYRAB|TRNA pseudouridine synthase A|Pyrococcus abyssi (strain GE5 /

Query: 1 QDEKAINITV 10
+DEKA+N V
Sbjct: 66 EDEKALNPMV 75




62|Sequence|306|315|INITVVESGY

>sp|PSB1_KORCO|PROTEASOME subunit beta 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 INITVVESGY 10
+ I+V+ESGY
Sbjct: 139 VAISVIESGY 148


>sp|COOS_METJA|CARBON monoxide dehydrogenase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ITVVESGY 10
ITVVE+G+
Sbjct: 234 ITVVENGF 241


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 INITVVESGY 10
+N+ V+E+G+
Sbjct: 37 LNVDVIEAGF 46


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 INITVVESGY 10
+N+ V+E+G+
Sbjct: 38 LNVDVIEAGF 47


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NITVVESGY 10
N+TV SGY
Sbjct: 84 NLTVTFSGY 92


>sp|RS3_METMJ|SMALL ribosomal subunit protein uS3|Methanoculleus marisnigri (strain

Query: 4 TVVESGY 10
T+VE GY
Sbjct: 160 TIVEKGY 166


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 4 TVVESGY 10
T+VE GY
Sbjct: 160 TIVEKGY 166


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 INITVVESG 9
INIT+VE
Sbjct: 536 INITIVEPA 544




63|Sequence|311|320|VESGYVRLLG

>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 1 VESGYVRL 8
VE+GYVR+
Sbjct: 85 VETGYVRV 92


>sp|IF2B_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 ESGYVRLLG 10
ESG VRL G
Sbjct: 73 ESGRVRLTG 81


>sp|SYE_CENSY|GLUTAMATE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 ESGYVRLLG 10
E G++RL+G
Sbjct: 454 EGGHIRLMG 462


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 1 VESGYVRLLG 10
VES Y RLLG
Sbjct: 350 VESEYGRLLG 359


>sp|TRM1_AERPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Aeropyrum pernix (strain

Query: 1 VESGYVRLL 9
VE+GYV+++
Sbjct: 88 VEAGYVKVI 96


>sp|SYTC_SULAC|THREONINE--TRNA ligase catalytic subunit|Sulfolobus acidocaldarius (strain ATCC

Query: 2 ESGYVRLLG 10
E YVR+LG
Sbjct: 111 EKQYVRVLG 119


>sp|PPS_METJA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VESGYVRLLG 10
+E+G +++LG
Sbjct: 131 IETGKIKILG 140


>sp|MTNA_AERPE|PUTATIVE methylthioribose-1-phosphate isomerase|Aeropyrum pernix (strain

Query: 2 ESGYVRL 8
E+GYVR+
Sbjct: 320 EAGYVRI 326


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VESGYVRLL 9
V +GY+RL+
Sbjct: 506 VAAGYIRLI 514


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 VESGYVRLL 9
V+SG VRLL
Sbjct: 329 VKSGRVRLL 337


>sp|Y1385_PYRHO|IRON-SULFUR cluster assembly SufBD family|Pyrococcus horikoshii (strain ATCC

Query: 2 ESGYVRLLG 10
E+GYV L G
Sbjct: 291 ENGYVELNG 299


>sp|GLPK_PYRAB|GLYCEROL kinase|Pyrococcus abyssi (strain GE5 /

Query: 4 GYVRLLG 10
GY R+LG
Sbjct: 220 GYTRILG 226




64|Sequence|316|325|VRLLGEVGTL

>sp|RNP2_PYRAB|RIBONUCLEASE P protein component 2|Pyrococcus abyssi (strain GE5 /

Query: 1 VRLLGEVGT 9
+R+LGE+GT
Sbjct: 41 LRVLGELGT 49


>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 1 VRLLGEVG 8
+RL+GE+G
Sbjct: 283 IRLMGELG 290


>sp|RNP2_PYRFU|RIBONUCLEASE P protein component 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VRLLGEVGT 9
+R LGE+GT
Sbjct: 43 LRTLGELGT 51


>sp|THII_SULTO|PROBABLE tRNA sulfurtransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VRLLGEVG 8
VRL GE+G
Sbjct: 5 VRLAGEIG 12


>sp|RS4_HALSA|SMALL ribosomal subunit protein uS4|Halobacterium salinarum (strain

Query: 2 RLLGEVGTL 10
RLLG+ GT+
Sbjct: 57 RLLGQTGTV 65


>sp|RS4_HALS3|SMALL ribosomal subunit protein uS4|Halobacterium salinarum (strain

Query: 2 RLLGEVGTL 10
RLLG+ GT+
Sbjct: 57 RLLGQTGTV 65


>sp|IF2B_METMJ|TRANSLATION initiation factor 2 subunit|Methanoculleus marisnigri (strain

Query: 3 LLGEVGT 9
LLGE+GT
Sbjct: 63 LLGELGT 69


>sp|DNAG_HALSA|DNA primase DnaG|Halobacterium salinarum (strain ATCC 700922

Query: 1 VRLLGEVGTL 10
+R LG+VG+L
Sbjct: 224 LRELGQVGSL 233


>sp|DNAG_HALS3|DNA primase DnaG|Halobacterium salinarum (strain ATCC 29341

Query: 1 VRLLGEVGTL 10
+R LG+VG+L
Sbjct: 224 LRELGQVGSL 233


>sp|Y453_METAC|UNCHARACTERIZED glycosyltransferase MA_0453|Methanosarcina acetivorans (strain

Query: 1 VRLLGEVG 8
+RL+GE G
Sbjct: 58 IRLIGETG 65


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 1 VRLLGEVGTL 10
++L GE GT
Sbjct: 58 IKLAGEAGTF 67


>sp|GUAAB_METBF|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina barkeri

Query: 1 VRLLGEV 7
VR+LGEV
Sbjct: 194 VRILGEV 200


>sp|GUAAB_METAC|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosarcina

Query: 1 VRLLGEV 7
VR+LGEV
Sbjct: 194 VRILGEV 200


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 1 VRLLGEV 7
VR+LGEV
Sbjct: 194 VRILGEV 200


>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 VRLLGEVG 8
VRLL EVG
Sbjct: 18 VRLLEEVG 25




65|Sequence|321|330|EVGTLQFAEL

>sp|IDH_ARCFU|ISOCITRATE dehydrogenase [NADP]|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVGTLQFAE 9
+VGT +FAE
Sbjct: 395 KVGTREFAE 403


>sp|IF2B_METTP|TRANSLATION initiation factor 2 subunit|Methanothrix thermoacetophila (strain

Query: 3 GTLQFAEL 10
GTL FAE+
Sbjct: 194 GTLAFAEI 201




66|Sequence|326|335|QFAELHRSRT

>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 QFAELHRSRT 10
Q AEL R+RT
Sbjct: 155 QMAELRRTRT 164




67|Sequence|331|340|HRSRTLQVVF

>sp|UGNO_METMP|UDP-N-ACETYLGLUCOSAMINE 3-dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HRSRTLQVV 9
H++RTL +V
Sbjct: 228 HKTRTLNIV 236




68|Sequence|336|345|LQVVFEAYPP

>sp|METXA_HALGM|HOMOSERINE O-acetyltransferase|Haloferax gibbonsii (strain ATCC 33959

Query: 1 LQVVFEAY 8
LQV +EAY
Sbjct: 33 LQVAYEAY 40


>sp|F16PA_HALWD|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LQVVFEAYP 9
L+V FE YP
Sbjct: 250 LRVQFEGYP 258


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LQVVFEAYPP 10
+ ++F YPP
Sbjct: 374 IAIIFHNYPP 383


>sp|PURA_META3|ADENYLOSUCCINATE synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 VVFEAYP 9
VVF++YP
Sbjct: 219 VVFKSYP 225


>sp|RPO3_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus shibatae (strain ATCC

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACI7|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACI2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACI1|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACI6|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACI4|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACI3|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus islandicus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21


>sp|RPO3_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo3|Saccharolobus solfataricus (strain

Query: 1 LQVVFEAYP 9
+ +VFE YP
Sbjct: 13 IDLVFEGYP 21




69|Sequence|341|350|EAYPPPTVLW

>sp|RFRNP_HYPBU|RNA-FREE ribonuclease P|Hyperthermus butylicus (strain DSM 5456

Query: 1 EAYPPPTV 8
E Y PPTV
Sbjct: 55 EVYMPPTV 62


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 2 AYPPPTVLW 10
A P P VLW
Sbjct: 352 ADPLPVVLW 360


>sp|AROA_METB6|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 EAYPPPTV 8
E YPP T+
Sbjct: 143 EGYPPVTI 150


>sp|NIFE_METBA|NITROGENASE iron-molybdenum cofactor biosynthesis protein|Methanosarcina

Query: 1 EAYPPPTVL 9
E Y PP +L
Sbjct: 119 EVYHPPVIL 127


>sp|Y855_METJA|UNCHARACTERIZED protein MJ0855|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EAYPP 5
EAYPP
Sbjct: 60 EAYPP 64


>sp|CSA3_SACS2|CRISPR locus-related putative DNA-binding protein|Saccharolobus

Query: 3 YPPPTV 8
YPPP +
Sbjct: 58 YPPPRI 63


>sp|ILVC_METMJ|KETOL-ACID reductoisomerase (NADP(+))|Methanoculleus marisnigri (strain ATCC

Query: 4 PPPTV 8
PPPTV
Sbjct: 118 PPPTV 122


>sp|MTRC_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanosarcina barkeri (strain

Query: 3 YPPPTVL 9
YPP T++
Sbjct: 14 YPPQTIM 20


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 PPPTV 8
PPPTV
Sbjct: 38 PPPTV 42


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 PPPTV 8
PPPTV
Sbjct: 35 PPPTV 39


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 PPPTV 8
PPPTV
Sbjct: 38 PPPTV 42


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 EAYPPPT 7
EAY PPT
Sbjct: 515 EAYKPPT 521


>sp|PYRDB_SACS2|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Saccharolobus solfataricus

Query: 1 EAYPPPTVL 9
E + PPTV+
Sbjct: 50 EPHKPPTVI 58


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 AYPPPTVLW 10
+YP PT L+
Sbjct: 238 SYPKPTTLY 246


>sp|CARA_METS5|CARBAMOYL phosphate synthase small chain|Metallosphaera sedula (strain ATCC

Query: 1 EAYPPPTVLW 10
E PP T +W
Sbjct: 311 EDIPPDTQIW 320




70|Sequence|346|355|PTVLWFKDNR

>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 PTVLWFKDNR 10
P + W +DNR
Sbjct: 54 PLIEWLQDNR 63


>sp|SYDND_HALSA|ASPARTATE--TRNA(ASP/ASN) ligase|Halobacterium salinarum (strain ATCC 700922

Query: 5 WFKDNR 10
WF DNR
Sbjct: 149 WFYDNR 154


>sp|Y584_METJA|UPF0718 protein MJ0584|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TVLWFKD 8
T +WFKD
Sbjct: 223 TKIWFKD 229


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LWFKDNR 10
+W KDN+
Sbjct: 474 IWLKDNK 480


>sp|APGM_METMP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PTVLWFKDNR 10
P VLW K R
Sbjct: 356 PVVLWGKSVR 365


>sp|RL24E_METS5|LARGE ribosomal subunit protein eL24|Metallosphaera sedula (strain ATCC

Query: 2 TVLWFKDNR 10
T+LWF N+
Sbjct: 28 TILWFCSNK 36


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 VLWFKDN 9
V W KDN
Sbjct: 322 VTWIKDN 328


>sp|SYM_METB6|METHIONINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 5 WFKDNR 10
W KDNR
Sbjct: 277 WCKDNR 282


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 TVLWFKD 8
T +WF+D
Sbjct: 972 TKIWFRD 978


>sp|TMBL2_PYRFU|PUTATIVE HTH-type transcriptional regulator TrmBL2|Pyrococcus furiosus

Query: 2 TVLWFKDNR 10
T +W KD+R
Sbjct: 237 TQVWIKDHR 245


>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 2 TVLWFKD 8
T++W KD
Sbjct: 125 TIIWIKD 131


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 5 WFKDN 9
WF+DN
Sbjct: 448 WFEDN 452


>sp|TYW1_METJA|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Methanocaldococcus jannaschii

Query: 1 PTVLWFKDN 9
P+V+W + N
Sbjct: 57 PSVIWCQQN 65


>sp|GLPK_PYRFU|GLYCEROL kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TVLWFKDNR 10
TV+W KD +
Sbjct: 85 TVIWKKDGK 93


>sp|MALQ_THEKO|4-ALPHA-GLUCANOTRANSFERASE kodakarensis (strain ATCC BAA-918

Query: 1 PTVLWFKDNR 10
P + W +DN+
Sbjct: 53 PLLEWIRDNK 62


>sp|KTHY_PYRFU|PROBABLE thymidylate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 WFKDN 9
WF+DN
Sbjct: 27 WFEDN 31


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 4 LWFKDN 9
+W KDN
Sbjct: 67 IWLKDN 72




71|Sequence|351|360|FKDNRTLGDS

>sp|RIFK_THEKO|RIBOFLAVIN kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KDNRTLGD 9
KD RT GD
Sbjct: 150 KDGRTFGD 157


>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 3 DNRTLG 8
DNRTLG
Sbjct: 473 DNRTLG 478


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 3 DNRTLG 8
DNRTLG
Sbjct: 481 DNRTLG 486


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FKDNRTLGDS 10
FK+ TLGD+
Sbjct: 772 FKNKETLGDN 781


>sp|CDPAS_NATPD|CDP-ARCHAEOL synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FKDNRTLGD 9
+ +NR LGD
Sbjct: 49 YDENRILGD 57


>sp|PUR7_PYRAE|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FKDNRTLGD 9
FKD T GD
Sbjct: 23 FKDEVTAGD 31


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 KDNRTLGDS 10
K+N+T+G S
Sbjct: 38 KENKTIGHS 46


>sp|PUR7_PYRCJ|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FKDNRTLGD 9
FKD T GD
Sbjct: 26 FKDEVTAGD 34




72|Sequence|356|365|TLGDSSAGEI

>sp|MTRH_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanosarcina acetivorans (strain

Query: 2 LGDSSAGEI 10
L DSSAGE+
Sbjct: 101 LIDSSAGEV 109


>sp|IF2G_HALWD|TRANSLATION initiation factor 2 subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TLGDSSAGEI 10
T GDS AG+I
Sbjct: 303 TKGDSLAGQI 312


>sp|PELO_AERPE|PROTEIN pelota homolog|Aeropyrum pernix (strain ATCC 700893

Query: 3 GDSSAGE 9
GDS AGE
Sbjct: 327 GDSPAGE 333




73|Sequence|361|370|SAGEIALSTR

>sp|Y433_ARCFU|PROBABLE S-adenosyl-L-methionine-binding protein AF_0433|Archaeoglobus

Query: 3 GEIALSTR 10
GE+A++TR
Sbjct: 327 GELAMATR 334


>sp|RS19_PYRCJ|SMALL ribosomal subunit protein uS19|Pyrobaculum calidifontis (strain DSM

Query: 3 GEIALSTR 10
GE AL+TR
Sbjct: 130 GEFALTTR 137




74|Sequence|366|375|ALSTRNVSET

>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 1 ALSTRNVS 8
ALS RN+S
Sbjct: 183 ALSNRNIS 190




75|Sequence|371|380|NVSETRYVSE

***** No hits found ******


76|Sequence|376|385|RYVSELTLVR

>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 RYVSELTLVR 10
RYV E TL+R
Sbjct: 264 RYVDERTLIR 273


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 RYVSELTLV 9
RYV+ELT V
Sbjct: 269 RYVAELTGV 277


>sp|MCM_SULAC|MINICHROMOSOME maintenance protein MCM|Sulfolobus acidocaldarius (strain ATCC

Query: 1 RYVSELTLV 9
RY++E TL+
Sbjct: 453 RYIAERTLI 461


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 2 YVSELTLV 9
YVS+LT++
Sbjct: 395 YVSQLTVI 402




77|Sequence|381|390|LTLVRVKVAE

***** No hits found ******


78|Sequence|386|395|VKVAEAGHYT

>sp|TRPC_METJA|INDOLE-3-GLYCEROL phosphate synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VKVAEAGHYT 10
+KV E+G YT
Sbjct: 221 IKVGESGIYT 230


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 VKVAEAGHYT 10
V++AE G YT
Sbjct: 160 VEIAEEGEYT 169


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 VKVAEAGHYT 10
V++AE G YT
Sbjct: 157 VEIAEEGDYT 166


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 VKVAEAGHYT 10
V++AE G YT
Sbjct: 157 VEIAEEGDYT 166


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 VKVAEAGHYT 10
V++AE G YT
Sbjct: 157 VEIAEEGDYT 166


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 VKVAEAGHYT 10
V++AE G YT
Sbjct: 157 VEIAEEGDYT 166


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKVAEAGHYT 10
V++AE G YT
Sbjct: 160 VEIAEEGDYT 169


>sp|GCK_PYRHO|GLYCERATE 2-kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VKVAEAGH 8
+KV EAGH
Sbjct: 91 IKVIEAGH 98


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 KVAEAGH 8
K+AEAGH
Sbjct: 55 KLAEAGH 61


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 5 EAGHYT 10
E GHYT
Sbjct: 89 EGGHYT 94


>sp|FDHB_METFO|F420-DEPENDENT formate dehydrogenase subunit beta|Methanobacterium formicicum

Query: 2 KVAEAGHY 9
++AEAG Y
Sbjct: 16 EIAEAGEY 23


>sp|RNZ_METTH|RIBONUCLEASE Z|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KVAEAGHYT 10
K AE+GH T
Sbjct: 237 KAAESGHST 245


>sp|TMCA2_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 2|Saccharolobus solfataricus

Query: 1 VKVAEAGH 8
VKV++ GH
Sbjct: 292 VKVSDTGH 299


>sp|PYRG_AERPE|CTP synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 VKVAEAGHYT 10
VKVA G YT
Sbjct: 293 VKVAMVGKYT 302


>sp|Y1870_ARCFU|UNCHARACTERIZED protein AF_1870|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKVAEAGHYT 10
V VAE G YT
Sbjct: 16 VLVAEQGSYT 25


>sp|GLNB3_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 3 VAEAGHYT 10
+AEAG+Y+
Sbjct: 20 LAEAGYYS 27




79|Sequence|391|400|AGHYTMRAFH

>sp|Y452_METJA|UNCHARACTERIZED protein MJ0452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GHYTMRAFH 10
G YT RAFH
Sbjct: 124 GVYTARAFH 132


>sp|RPO1C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanocaldococcus jannaschii (strain

Query: 3 HYTMRAFH 10
H TMR FH
Sbjct: 545 HNTMRTFH 552


>sp|RS3_METBU|SMALL ribosomal subunit protein uS3|Methanococcoides burtonii (strain DSM

Query: 1 AGHYTMRA 8
AGH TMRA
Sbjct: 112 AGHNTMRA 119


>sp|RS3_METBF|SMALL ribosomal subunit protein uS3|Methanosarcina barkeri (strain Fusaro

Query: 1 AGHYTMRA 8
AGH T+RA
Sbjct: 112 AGHNTLRA 119


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AGHYTMR 7
GHY MR
Sbjct: 210 GGHYAMR 216


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 AGHYTMR 7
GHY MR
Sbjct: 221 GGHYAMR 227


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 AGHYTMR 7
GHY MR
Sbjct: 210 GGHYAMR 216


>sp|MTRC_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanothermobacter

Query: 1 AGHYTMRA 8
AG YTM+A
Sbjct: 154 AGSYTMQA 161


>sp|RS3_METAC|SMALL ribosomal subunit protein uS3|Methanosarcina acetivorans (strain

Query: 1 AGHYTMRA 8
AGH T+RA
Sbjct: 112 AGHNTLRA 119


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus (strain

Query: 1 AGHYTMRAFH 10
GH+TM A+
Sbjct: 165 GGHFTMDAYQ 174


>sp|RS3_METMA|SMALL ribosomal subunit protein uS3|Methanosarcina mazei (strain ATCC

Query: 1 AGHYTMRA 8
AGH T+RA
Sbjct: 112 AGHNTIRA 119


>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus (strain

Query: 1 AGHYTM 6
GHYTM
Sbjct: 164 GGHYTM 169


>sp|Y1118_PICTO|UPF0173 metal-dependent hydrolase PTO1118|Picrophilus torridus (strain ATCC

Query: 1 AGHYTM 6
GHYTM
Sbjct: 158 GGHYTM 163


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GHYTMRAFH 10
GH M FH
Sbjct: 352 GHSVMATFH 360


>sp|PDXS_THEON|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus onnurineus (strain

Query: 2 GHYTMR 7
GHYT R
Sbjct: 224 GHYTYR 229


>sp|PDXS_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus kodakarensis

Query: 2 GHYTMR 7
GHYT R
Sbjct: 224 GHYTYR 229


>sp|PDXS_THEGJ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Thermococcus gammatolerans

Query: 2 GHYTMR 7
GHYT R
Sbjct: 224 GHYTYR 229


>sp|Y864_THEVO|UPF0173 metal-dependent hydrolase TV0864|Thermoplasma volcanium (strain

Query: 1 AGHYTM 6
GHYTM
Sbjct: 161 GGHYTM 166


>sp|Y764_THEAC|UPF0173 metal-dependent hydrolase Ta0764|Thermoplasma acidophilum (strain

Query: 1 AGHYTM 6
GHYTM
Sbjct: 162 GGHYTM 167


>sp|Y1254_IGNH4|UPF0173 metal-dependent hydrolase Igni_1254|Ignicoccus hospitalis (strain

Query: 1 AGHYTM 6
GHYTM
Sbjct: 168 GGHYTM 173




80|Sequence|396|405|MRAFHEDAEV

>sp|THS2_HALVD|CHAPERONIN subunit CTT2|Haloferax volcanii (strain ATCC 29605

Query: 1 MRAFHEDAEV 10
+RA HED +V
Sbjct: 467 LRAAHEDGQV 476


>sp|TRM1_METM6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 MRAFHEDAEV 10
+ FHEDA V
Sbjct: 107 VEVFHEDANV 116


>sp|Y133_THEAC|PUTATIVE quercetin 2,3-dioxygenase Ta0133|Thermoplasma acidophilum (strain

Query: 2 RAFHEDAE 9
+ FHED+E
Sbjct: 32 KTFHEDSE 39


>sp|TRM1_METM7|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 MRAFHEDAEV 10
+ FHEDA V
Sbjct: 107 VEVFHEDANV 116


>sp|TRM1_METMP|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 MRAFHEDAEV 10
+ FHEDA V
Sbjct: 107 VEVFHEDANV 116


>sp|TRM1_METMI|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 MRAFHEDAEV 10
+ FHEDA V
Sbjct: 107 VEVFHEDANV 116


>sp|Y300_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ0300|Methanocaldococcus

Query: 1 MRAFHEDAE 9
MRA HE+ E
Sbjct: 84 MRAIHENPE 92


>sp|TRM1_METM5|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanococcus maripaludis

Query: 1 MRAFHEDAEV 10
+ FHEDA V
Sbjct: 107 VEVFHEDANV 116


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 MRAFHEDAEV 10
+RA HED +V
Sbjct: 468 LRAKHEDGQV 477


>sp|IORB_METTM|INDOLEPYRUVATE oxidoreductase subunit IorB|Methanothermobacter marburgensis

Query: 1 MRAFHEDAE 9
+RAFHE E
Sbjct: 183 LRAFHEGFE 191


>sp|ASD_METBU|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanococcoides burtonii

Query: 3 AFHEDAE 9
AFH+D+E
Sbjct: 113 AFHKDSE 119


>sp|NADB_HALSA|L-ASPARTATE oxidase|Halobacterium salinarum (strain ATCC 700922

Query: 1 MRAFHEDAEV 10
M +HEDAE+
Sbjct: 267 MPDYHEDAEL 276


>sp|ADHS_METM5|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C5 /

Query: 5 HEDAEV 10
HEDAEV
Sbjct: 258 HEDAEV 263


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 1 MRAFHE 6
+RAFHE
Sbjct: 330 LRAFHE 335


>sp|TRPB1_PYRAB|TRYPTOPHAN synthase beta chain 1|Pyrococcus abyssi (strain GE5 /

Query: 1 MRAFHE 6
+RAFHE
Sbjct: 328 LRAFHE 333


>sp|PURA_METTH|ADENYLOSUCCINATE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 FHEDAEV 10
FHEDA +
Sbjct: 62 FHEDARL 68


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RAFHED 7
R FHED
Sbjct: 492 RVFHED 497




81|Sequence|401|410|EDAEVQLSFQ

>sp|SYS2_METKA|TYPE-2 serine--tRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EDAEVQLSFQ 10
ED V+L+FQ
Sbjct: 131 EDGTVRLTFQ 140




82|Sequence|406|415|QLSFQLQINV

>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QLSFQLQINV 10
+LSF LQI V
Sbjct: 197 ELSFSLQIGV 206


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QLSFQLQINV 10
+LSF LQI V
Sbjct: 197 ELSFSLQIGV 206




83|Sequence|411|420|LQINVPVRVL

>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LQINVPVRVL 10
++IN+P RVL
Sbjct: 500 IEINIPERVL 509


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LQINVPVRVL 10
++IN+P R+L
Sbjct: 500 IEINIPERIL 509


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LQINVPVRVL 10
++IN+P R+L
Sbjct: 500 IEINIPERIL 509


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 QINVPVRV 9
++NVPVR+
Sbjct: 20 KMNVPVRI 27


>sp|GCH3_SACS2|GTP cyclohydrolase III|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LQINVPVRV 9
+Q N+PVR+
Sbjct: 75 MQENLPVRI 83


>sp|SRP54_METS5|SIGNAL recognition particle 54 kDa|Metallosphaera sedula (strain ATCC

Query: 2 QINVPV 7
QINVPV
Sbjct: 149 QINVPV 154


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 2 QINVPV 7
QINVPV
Sbjct: 148 QINVPV 153


>sp|SURE_METMJ|5'-NUCLEOTIDASE SurE|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 LQINVPVRV 9
+ +N+P RV
Sbjct: 174 INVNIPARV 182


>sp|PSTOM_PYRAB|STOMATIN homolog PYRAB06580|Pyrococcus abyssi (strain GE5 /

Query: 4 NVPVRV 9
NVPVRV
Sbjct: 82 NVPVRV 87




84|Sequence|416|425|PVRVLELSES

>sp|Y1058_PYRAB|UPF0248 protein PYRAB10580|Pyrococcus abyssi (strain GE5 /

Query: 1 PVRVLEL 7
PVR++EL
Sbjct: 41 PVRIIEL 47


>sp|NNR_THEPD|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Thermofilum pendens (strain DSM

Query: 3 RVLELSES 10
R+LELS+S
Sbjct: 314 RILELSKS 321


>sp|CCA_METTH|CCA-ADDING enzyme|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 RVLELSES 10
RV+ELS+S
Sbjct: 21 RVMELSDS 28




85|Sequence|421|430|ELSESHPDSG

>sp|RFRNP_METJA|RNA-FREE ribonuclease P|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELSESHPDSG 10
ELS+ HP+ G
Sbjct: 133 ELSKKHPEMG 142


>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum aerophilum

Query: 2 LSESHPDS 9
L ESHPD+
Sbjct: 209 LLESHPDA 216


>sp|GLYA_NATPD|SERINE hydroxymethyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ELSESHPDS 9
+L ESHPD+
Sbjct: 318 DLRESHPDT 326


>sp|KCY_THEAC|CYTIDYLATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 SESHPDS 9
SESHP++
Sbjct: 53 SESHPEA 59


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 ELSESHPD 8
+L ESHPD
Sbjct: 318 DLRESHPD 325


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 ELSESHPD 8
+L ESHPD
Sbjct: 318 DLRESHPD 325


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ELSESHPD 8
E SESHP+
Sbjct: 92 EFSESHPE 99


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 ELSESHPD 8
E+ E+HPD
Sbjct: 217 EIHETHPD 224


>sp|MRE11_METMA|DNA double-strand break repair protein|Methanosarcina mazei (strain

Query: 1 ELSESHPDSG 10
E+S+ PDSG
Sbjct: 516 EISKVTPDSG 525


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSESHPD 8
+SE HPD
Sbjct: 94 ISEIHPD 100


>sp|KAE1B_METHJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 SESHPDS 9
SE HPD+
Sbjct: 325 SERHPDA 331


>sp|GLYA_HALLT|SERINE hydroxymethyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 1 ELSESHPD 8
+L +SHPD
Sbjct: 318 DLRDSHPD 325


>sp|DNAJ_HALSA|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 700922

Query: 1 ELSESHPD 8
++SE HPD
Sbjct: 27 QVSEYHPD 34


>sp|DNAJ_HALS3|CHAPERONE protein DnaJ|Halobacterium salinarum (strain ATCC 29341

Query: 1 ELSESHPD 8
++SE HPD
Sbjct: 27 QVSEYHPD 34


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ELSESHPDSG 10
E+ +HPD G
Sbjct: 284 EVYAAHPDHG 293


>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 4 ESHPDSG 10
+SHPD G
Sbjct: 82 DSHPDHG 88




86|Sequence|426|435|HPDSGEQTVR

>sp|TPIS_SULAC|TRIOSEPHOSPHATE isomerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HPDSGEQTVR 10
H DSGEQ R
Sbjct: 63 HVDSGEQGAR 72


>sp|URAD_HALVD|2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE decarboxylase|Haloferax volcanii (strain ATCC 29605

Query: 1 HPDSGEQT 8
HPD GE+T
Sbjct: 70 HPDLGERT 77


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 1 HPDSGEQTVR 10
HP G TVR
Sbjct: 112 HPAKGTNTVR 121


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 PDSGEQTVR 10
PDSGE +R
Sbjct: 169 PDSGETVLR 177


>sp|URAD_HALJB|2-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE decarboxylase|Halalkalicoccus jeotgali (strain DSM 18796

Query: 1 HPDSGEQT 8
HPD GE+T
Sbjct: 70 HPDLGERT 77


>sp|AATF_METTH|A-TYPE ATP synthase subunit F|Methanothermobacter thermautotrophicus

Query: 2 PDSGEQTVR 10
PD E+T+R
Sbjct: 31 PDEAEETIR 39


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HPDSGEQTV 9
HP S EQTV
Sbjct: 403 HPISEEQTV 411


>sp|TDXH_IGNH4|PEROXIREDOXIN hospitalis (strain KIN4/I /

Query: 1 HPDSGEQTVR 10
HP+ G TVR
Sbjct: 115 HPEGGVVTVR 124


>sp|PDXT_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanocorpusculum labreanum

Query: 1 HPDSGEQT 8
HP+ GE T
Sbjct: 168 HPELGEDT 175


>sp|RBL_METMA|RIBULOSE bisphosphate carboxylase|Methanosarcina mazei (strain ATCC

Query: 1 HPDSGEQTVR 10
+ D G QTVR
Sbjct: 67 YADEGAQTVR 76


>sp|Y1344_METBU|PROTEIN Mbur_1344|Methanococcoides burtonii (strain DSM 6242

Query: 5 GEQTVR 10
GEQTVR
Sbjct: 7 GEQTVR 12


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 1 HPDSGEQTV 9
HP++GE V
Sbjct: 287 HPETGEYKV 295


>sp|PDXT_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanothermobacter

Query: 1 HPDSGEQT 8
HP+ GE T
Sbjct: 170 HPELGEDT 177


>sp|CDC6B_HALMA|ORC1-TYPE DNA replication protein 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 PDSGEQ 7
PDSGE+
Sbjct: 403 PDSGEE 408


>sp|SYFB_METHJ|PHENYLALANINE--TRNA ligase beta subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HPDSGEQTV 9
HP S EQT+
Sbjct: 403 HPISEEQTL 411




87|Sequence|431|440|EQTVRCRGRG

>sp|XERA_METTH|TYROSINE recombinase XerA|Methanothermobacter thermautotrophicus (strain

Query: 1 EQTVRCRGRG 10
E+T+R RG+G
Sbjct: 185 ERTIRIRGKG 194


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 3 TVRCRGRG 10
+V CRGRG
Sbjct: 39 SVVCRGRG 46


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 RCRGR 9
RCRGR
Sbjct: 376 RCRGR 380


>sp|UPP_METTH|URACIL phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 3 TVRCRG 8
T+RCRG
Sbjct: 22 TIRCRG 27


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 3 TVRCRGRG 10
TVR RG+G
Sbjct: 562 TVRVRGQG 569


>sp|SYT_METTP|THREONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 TVRCRG 8
T+RC+G
Sbjct: 122 TIRCKG 127


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 5 RCRGRG 10
+CRG+G
Sbjct: 229 KCRGKG 234


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 EQTVRCRGRG 10
E T+RC G G
Sbjct: 3 EYTLRCAGCG 12




88|Sequence|436|445|CRGRGMPQPN

>sp|PUR7_THEAC|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 RGRGMPQPN 10
R RGMP+P+
Sbjct: 258 RSRGMPEPD 266


>sp|Y515_METJA|UNCHARACTERIZED protein MJ0515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CRGRGMPQPN 10
CRG G+P+ +
Sbjct: 219 CRGSGLPESD 228


>sp|KAE1B_METMA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RGRGMPQP 9
RG G+P P
Sbjct: 170 RGAGLPHP 177


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 CRGRGMPQ 8
CRG G P+
Sbjct: 404 CRGSGKPE 411


>sp|AMPPA_HYPBU|AMP phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 CRGRGM 6
CRGRG+
Sbjct: 42 CRGRGV 47


>sp|ARGJ_METMA|GLUTAMATE N-acetyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RGRGMPQPN 10
+G GM +PN
Sbjct: 169 KGSGMIEPN 177


>sp|ARGJ_METAC|GLUTAMATE N-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 RGRGMPQPN 10
+G GM +PN
Sbjct: 169 KGSGMIEPN 177


>sp|TF2B_CALMQ|TRANSCRIPTION initiation factor IIB|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 CRGRGMPQ 8
CR +GMP+
Sbjct: 201 CRMQGMPR 208


>sp|DNAJ_NATPD|CHAPERONE protein DnaJ|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RGRGMPQ 8
RG+GMP+
Sbjct: 320 RGKGMPR 326




89|Sequence|441|450|MPQPNIIWSA

>sp|RACD_PYRHO|ASPARTATE racemase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PQPNIIWSA 10
P+P +IW+A
Sbjct: 59 PRPQLIWTA 67


>sp|FTSZ2_METJA|CELL division protein FtsZ 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 PQPNIIWSA 10
P+ N+IW A
Sbjct: 315 PEANVIWGA 323


>sp|FTSZ_METTH|CELL division protein FtsZ|Methanothermobacter thermautotrophicus

Query: 2 PQPNIIWSA 10
P NIIW A
Sbjct: 314 PDANIIWGA 322


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 1 MPQPNIIWSA 10
M +PN++W A
Sbjct: 207 MNEPNVVWGA 216


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 4 PNIIWS 9
PN++WS
Sbjct: 57 PNLVWS 62


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 2 PQPNIIWSA 10
PQ +IW+A
Sbjct: 361 PQSFLIWNA 369


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 2 PQPNIIWSA 10
PQ +IW+A
Sbjct: 355 PQSFLIWNA 363


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 4 PNIIW 8
PN+IW
Sbjct: 53 PNVIW 57


>sp|Y819_METJA|PUTATIVE uncharacterized protein MJ0819|Methanocaldococcus jannaschii

Query: 2 PQPNIIWSA 10
PQ ++W+A
Sbjct: 96 PQSYLVWNA 104


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 2 PQPNIIWSA 10
PQ ++W+A
Sbjct: 366 PQSYLVWNA 374


>sp|Y439_METJA|UNCHARACTERIZED ATP-binding protein MJ0439|Methanocaldococcus jannaschii (strain

Query: 2 PQPNIIWSA 10
PQ ++W+A
Sbjct: 348 PQSYLVWNA 356


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 2 PQPNIIWSA 10
PQ ++W+A
Sbjct: 352 PQSYLVWNA 360


>sp|Y3514_METJA|UNCHARACTERIZED protein MJECL14|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PQPNIIWSA 10
PQ ++W+A
Sbjct: 295 PQSYLVWNA 303


>sp|Y074_METJA|UNCHARACTERIZED ATP-binding protein MJ0074|Methanocaldococcus jannaschii (strain

Query: 2 PQPNIIWSA 10
PQ ++W+A
Sbjct: 345 PQSYLVWNA 353


>sp|EF1A_PICTO|ELONGATION factor 1-alpha|Picrophilus torridus (strain ATCC 700027

Query: 2 PQPNIIW 8
P PN+ W
Sbjct: 197 PSPNLSW 203


>sp|RS4E_NANEQ|SMALL ribosomal subunit protein eS4|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 MPQPNII 7
MP PNI+
Sbjct: 203 MPWPNIV 209




90|Sequence|446|455|IIWSACRDLK

>sp|DUT_METJA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Methanocaldococcus jannaschii

Query: 1 IIWSACRDLK 10
I++ CRD+K
Sbjct: 137 IVFVECRDVK 146


>sp|FLAK_HALMA|PREFLAGELLIN peptidase|Haloarcula marismortui (strain ATCC 43049

Query: 3 WSACRDLK 10
W+A RD+K
Sbjct: 19 WAAYRDVK 26


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 4 SACRDLK 10
SACRD++
Sbjct: 146 SACRDVE 152


>sp|G1PDH_METBF|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina barkeri (strain Fusaro /

Query: 2 IWSACRDLK 10
I CRDLK
Sbjct: 29 IGDVCRDLK 37


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 2 IWSACRDLK 10
I CRDLK
Sbjct: 29 IGDVCRDLK 37


>sp|CHER_HALS3|CHEMOTAXIS protein methyltransferase|Halobacterium salinarum (strain ATCC

Query: 2 IWSACRDL 9
+W+A RD+
Sbjct: 78 VWTALRDV 85


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 6 CRDLK 10
CRDLK
Sbjct: 33 CRDLK 37


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IWSACR 7
IW+AC+
Sbjct: 581 IWNACK 586


>sp|AGL16_SULAC|ARCHAEAL glycosylation protein 16|Sulfolobus acidocaldarius (strain ATCC

Query: 4 SACRDLK 10
S+C+DLK
Sbjct: 303 SSCQDLK 309


>sp|SRP19_METM5|SIGNAL recognition particle 19 kDa|Methanococcus maripaludis (strain C5

Query: 1 IIWSACRDLK 10
IIW A DLK
Sbjct: 5 IIWPAYIDLK 14


>sp|FER_PYRIL|FERREDOXIN islandicum (strain DSM 4184

Query: 1 IIWSACRD 8
+IW C+D
Sbjct: 42 LIWEKCKD 49


>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 IWSACR 7
IW+ CR
Sbjct: 606 IWNVCR 611


>sp|SYV_METJA|VALINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WSACR 7
W+ACR
Sbjct: 581 WNACR 585


>sp|Y1731_ARCFU|UNCHARACTERIZED protein AF_1731|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIWSACRDLK 10
I+W A +LK
Sbjct: 9 ILWDAFEELK 18




91|Sequence|451|460|CRDLKRCPRE

>sp|CAS4_SACS2|CRISPR-ASSOCIATED exonuclease Cas4|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DLKRCPR 9
DL RCPR
Sbjct: 28 DLVRCPR 34


>sp|PCKG_SULTO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CRDLKRCPR 9
C+ LK+ PR
Sbjct: 466 CKKLKKVPR 474


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RDLKRCPRE 10
RDLK C E
Sbjct: 166 RDLKHCEEE 174


>sp|CDC62_METTH|ORC1-TYPE DNA replication protein 2|Methanothermobacter thermautotrophicus

Query: 3 DLKRCP 8
DL+RCP
Sbjct: 372 DLRRCP 377


>sp|HYPA_IGNH4|HYDROGENASE maturation factor HypA|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 RDLKRCPR 9
+DL +CP+
Sbjct: 106 KDLLKCPK 113


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RDLKRCP 8
+ LKRCP
Sbjct: 57 QKLKRCP 63


>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 3 DLKRCP 8
DLK CP
Sbjct: 133 DLKECP 138


>sp|Y1614_METAC|MACRO domain-containing protein MA_1614|Methanosarcina acetivorans

Query: 1 CRDLKRCP 8
CR L CP
Sbjct: 74 CRTLNGCP 81


>sp|RL31_METPE|LARGE ribosomal subunit protein eL31|Methanosphaerula palustris (strain

Query: 2 RDLKRCPR 9
RD+KR PR
Sbjct: 15 RDVKRSPR 22


>sp|SFSA_PYRFU|SUGAR fermentation stimulation protein homolog|Pyrococcus furiosus

Query: 1 CRDLKRCPR 9
CR +KR PR
Sbjct: 102 CRIIKREPR 110




92|Sequence|456|465|RCPRELPPTL

>sp|MVHG_METTH|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter thermautotrophicus

Query: 2 CPRELPP 8
CPRE PP
Sbjct: 184 CPREKPP 190


>sp|MVHG_METTM|F420-NON-REDUCING hydrogenase subunit G|Methanothermobacter marburgensis (strain ATCC

Query: 2 CPRELPP 8
CPRE PP
Sbjct: 184 CPREKPP 190


>sp|Y896_ARCFU|UNCHARACTERIZED protein AF_0896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RELPPTL 10
+E+PPTL
Sbjct: 105 KEIPPTL 111


>sp|Y1657_METJA|UNCHARACTERIZED protease MJ1657|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CPREL 6
CPREL
Sbjct: 285 CPREL 289


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 5 ELPPTL 10
E+PPTL
Sbjct: 297 EMPPTL 302


>sp|CDC6_CENSY|ORC1-TYPE DNA replication protein|Cenarchaeum symbiosum (strain A)

Query: 4 RELPPT 9
+ELPPT
Sbjct: 131 KELPPT 136


>sp|AGOG_AERPE|N-GLYCOSYLASE/DNA lyase|Aeropyrum pernix (strain ATCC 700893

Query: 2 CPRELPP 8
PRELPP
Sbjct: 247 APRELPP 253


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 2 CPRELP 7
CPR LP
Sbjct: 456 CPRNLP 461


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 2 CPRELP 7
CP+E+P
Sbjct: 451 CPQEIP 456


>sp|GYAR_PYRHO|GLYOXYLATE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 ELPPTL 10
E+PPTL
Sbjct: 315 EIPPTL 320


>sp|Y1236_ARCFU|UNCHARACTERIZED protein AF_1236|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 RELPPTL 10
RELPP L
Sbjct: 166 RELPPLL 172


>sp|GYAR_PYRFU|GLYOXYLATE reductase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 ELPPTL 10
E+PPTL
Sbjct: 315 EIPPTL 320


>sp|SYFB_ARCFU|PHENYLALANINE--TRNA ligase beta subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 ELPPTL 10
E+PPTL
Sbjct: 345 EIPPTL 350


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 4 RELPPTL 10
R+LPPT+
Sbjct: 197 RKLPPTI 203


>sp|RS14Z_AERPE|SMALL ribosomal subunit protein uS14|Aeropyrum pernix (strain ATCC

Query: 2 CPRELPPTL 10
C RE+ PTL
Sbjct: 40 CFREIAPTL 48


>sp|DNAG_AERPE|DNA primase DnaG|Aeropyrum pernix (strain ATCC 700893

Query: 3 PRELPPTL 10
P E PPT+
Sbjct: 311 PEEKPPTV 318


>sp|GCSPA_AERPE|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Aeropyrum pernix

Query: 4 RELPPTL 10
R++PPT+
Sbjct: 31 RDIPPTI 37


>sp|HDRC1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit C1|Methanococcus

Query: 1 RCPRELPPT 9
+CPRE+ T
Sbjct: 86 KCPREVKIT 94


>sp|DPCKG_METKA|GTP-DEPENDENT dephospho-CoA kinase|Methanopyrus kandleri (strain AV19 /

Query: 1 RCPRELPPTL 10
R PREL P L
Sbjct: 6 RLPRELRPEL 15




93|Sequence|461|470|LPPTLLGNSS

>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 1 LPPTLLGNS 9
LPPTL GNS
Sbjct: 190 LPPTLYGNS 198


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 LPPTLLGNS 9
LPP+L GNS
Sbjct: 190 LPPSLYGNS 198


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PPTLLG 7
PPTLLG
Sbjct: 393 PPTLLG 398


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 2 PPTLLG 7
PPTLLG
Sbjct: 393 PPTLLG 398


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LPPTLLGN 8
+PPTLL N
Sbjct: 298 MPPTLLRN 305


>sp|CAPPA_SULTO|PHOSPHOENOLPYRUVATE carboxylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACS2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACI7|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACI6|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACI4|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACI3|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACI2|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_SACI1|PHOSPHOENOLPYRUVATE carboxylase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 LPPTLLGNSS 10
+PP L+G SS
Sbjct: 391 IPPELIGISS 400


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LPPTLL 6
LPPTLL
Sbjct: 361 LPPTLL 366


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LPPTLLG 7
LPP LLG
Sbjct: 380 LPPELLG 386


>sp|Y759_ARCFU|UNCHARACTERIZED protein AF_0759|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPPTLLGN 8
LPP L GN
Sbjct: 98 LPPGLQGN 105


>sp|Y2050_ARCFU|UPF0047 protein AF_2050|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LPPTLLGNS 9
L TLLGNS
Sbjct: 82 LKATLLGNS 90


>sp|CIMA_SULAC|(R)-CITRAMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LPPTLLGNS 9
+ PTL+GN+
Sbjct: 319 IDPTLVGNN 327




94|Sequence|466|475|LGNSSEEESQ

***** No hits found ******


95|Sequence|471|480|EEESQLETNV

>sp|MVP5K_THEAC|MEVALONATE-3-PHOSPHATE 5-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EESQLETNV 10
+ES LET+V
Sbjct: 48 QESHLETSV 56




96|Sequence|476|485|LETNVTYWEE

>sp|GLME_HALSA|GLUTAMATE mutase epsilon subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 LETNVTYWE 9
LET + YW+
Sbjct: 183 LETTIEYWQ 191


>sp|RS3_AERPE|SMALL ribosomal subunit protein uS3|Aeropyrum pernix (strain ATCC

Query: 1 LETNVTYWEE 10
L TN+T W E
Sbjct: 42 LGTNITIWAE 51


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 2 ETNVTYWEE 10
E+N+TY EE
Sbjct: 129 ESNLTYVEE 137


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ETNVTYWEE 10
+T +TYWE+
Sbjct: 379 KTVITYWEK 387


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 ETNVTYWEE 10
ETN+ WE+
Sbjct: 213 ETNLKLWEK 221


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 LETNVTYW 8
LET+ YW
Sbjct: 198 LETSAAYW 205


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 LETNVTYW 8
LET+ YW
Sbjct: 198 LETSAAYW 205




97|Sequence|481|490|TYWEEEQEFE

>sp|HCP_METMA|HYDROXYLAMINE reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 YWEEEQEFE 10
+W + +EFE
Sbjct: 284 WWRQNEEFE 292


>sp|GATD_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TYWEEEQEF 9
TYW + +EF
Sbjct: 4 TYWGKAREF 12


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 YWEEE 6
YWEEE
Sbjct: 156 YWEEE 160




98|Sequence|486|495|EQEFEVVSTL

>sp|PYRI_THEAC|ASPARTATE carbamoyltransferase regulatory chain|Thermoplasma acidophilum

Query: 1 EQEFEVVS 8
E EFE+VS
Sbjct: 122 ESEFEIVS 129


>sp|RIO2_METJA|RIO-TYPE serine/threonine-protein kinase Rio2|Methanocaldococcus jannaschii

Query: 1 EQEFEVVSTL 10
E+EFE+++ L
Sbjct: 129 EREFEILNEL 138




99|Sequence|491|500|VVSTLRLQHV

>sp|AMZA_HALSA|ARCHAEMETZINCIN salinarum (strain ATCC 700922

Query: 1 VVSTLRLQ 8
VVST RLQ
Sbjct: 97 VVSTYRLQ 104


>sp|AMZA_HALS3|ARCHAEMETZINCIN salinarum (strain ATCC 29341

Query: 1 VVSTLRLQ 8
VVST RLQ
Sbjct: 97 VVSTYRLQ 104




100|Sequence|496|505|RLQHVDRPLS

>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LQHVDRP 8
++H+DRP
Sbjct: 455 IKHIDRP 461


>sp|PUR7_PYRAE|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LQHVDRPL 9
LQH+ RPL
Sbjct: 105 LQHLSRPL 112


>sp|AMPD_AERPE|ANHYDROMEVALONATE phosphate decarboxylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLQHVDRP 8
RL++VD+P
Sbjct: 89 RLEYVDKP 96


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 2 LQHVDRP 8
++H DRP
Sbjct: 439 IEHADRP 445


>sp|SYH_PYRAE|HISTIDINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 LQHVDRPL 9
+Q+V+RPL
Sbjct: 326 IQNVERPL 333


>sp|NFI_AERPE|ENDONUCLEASE V|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLQHVDRPL 9
RL+ ++RPL
Sbjct: 239 RLEELERPL 247




101|Sequence|501|510|DRPLSVRCTL

>sp|Y453_METLZ|UPF0280 protein Mlab_0453|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 DRPLSVRC 8
D P SVRC
Sbjct: 59 DAPESVRC 66


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 2 RPLSVRC 8
+PL VRC
Sbjct: 90 QPLEVRC 96


>sp|PYRI_SULAC|ASPARTATE carbamoyltransferase regulatory chain|Sulfolobus acidocaldarius

Query: 1 DRPLSVRC 8
++PL +RC
Sbjct: 135 EKPLKMRC 142


>sp|PSB1_KORCO|PROTEASOME subunit beta 1|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DRPLSVR 7
+RPLSVR
Sbjct: 76 ERPLSVR 82


>sp|UVRB_NATPD|UVRABC system protein B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DRPLSV 6
DRPLSV
Sbjct: 15 DRPLSV 20




102|Sequence|506|515|VRCTLRNAVG

>sp|SYR_METTH|ARGININE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VRCTLRNAV 9
VR TLRNA+
Sbjct: 541 VRKTLRNAL 549


>sp|DNAG_METVS|DNA primase DnaG|Methanococcus vannielii (strain ATCC 35089

Query: 1 VRCTLRNAVG 10
+RC ++NA+
Sbjct: 184 LRCGIKNAIA 193


>sp|DNAG_META3|DNA primase DnaG|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 VRCTLRNAVG 10
+RC ++NA+
Sbjct: 186 LRCGIKNAIA 195


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus

Query: 2 RCTLRNAVG 10
+C L NAVG
Sbjct: 63 KCGLINAVG 71


>sp|AATF_METM6|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C6 /

Query: 1 VRCTLRNAVG 10
V+ +RNAVG
Sbjct: 86 VKVLVRNAVG 95


>sp|RL40_METPE|LARGE ribosomal subunit protein eL40|Methanosphaerula palustris (strain

Query: 1 VRCTLRNAV 9
+RC RNAV
Sbjct: 18 MRCNARNAV 26


>sp|AATF_METM7|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C7 /

Query: 1 VRCTLRNAVG 10
V+ +RNAVG
Sbjct: 86 VKVLVRNAVG 95


>sp|AATF_METMP|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain DSM

Query: 1 VRCTLRNAVG 10
V+ +RNAVG
Sbjct: 86 VKVLVRNAVG 95


>sp|AATF_METVS|A-TYPE ATP synthase subunit F|Methanococcus vannielii (strain ATCC 35089

Query: 1 VRCTLRNAVG 10
V+ +RNAVG
Sbjct: 86 VKILVRNAVG 95


>sp|AATF_METM5|A-TYPE ATP synthase subunit F|Methanococcus maripaludis (strain C5 /

Query: 1 VRCTLRNAVG 10
V+ +RNAVG
Sbjct: 86 VKVLVRNAVG 95


>sp|RL40_METBF|LARGE ribosomal subunit protein eL40|Methanosarcina barkeri (strain

Query: 1 VRCTLRNAV 9
+RC RNA+
Sbjct: 18 MRCNARNAI 26




103|Sequence|511|520|RNAVGQDTQE

>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NAVGQDT 8
NA+G DT
Sbjct: 426 NAIGSDT 432




104|Sequence|516|525|QDTQEVIVVP

>sp|COFC_METFA|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanocaldococcus fervens (strain DSM 4213

Query: 2 DTQEVIVVP 10
D +EVI++P
Sbjct: 87 DDEEVIIIP 95


>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TQEVIVVP 10
T+EVI VP
Sbjct: 157 TKEVITVP 164


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TQEVIVVP 10
T+EVI VP
Sbjct: 157 TREVITVP 164




105|Sequence|521|530|VIVVPHSLPF

>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 5 PHSLPF 10
PHSLPF
Sbjct: 131 PHSLPF 136


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 5 PHSLPF 10
PHSLPF
Sbjct: 131 PHSLPF 136


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 123 PHSIPF 128


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 137 PHSIPF 142


>sp|RS5_METVS|SMALL ribosomal subunit protein uS5|Methanococcus vannielii (strain ATCC

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 134 PHSIPF 139


>sp|RS5_METVA|SMALL ribosomal subunit protein uS5|Methanococcus vannielii

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 134 PHSIPF 139


>sp|RS5_METMP|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain DSM

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 134 PHSIPF 139


>sp|RS5_METM7|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C7

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 138 PHSIPF 143


>sp|RS5_METM6|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C6

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 138 PHSIPF 143


>sp|RS5_METM5|SMALL ribosomal subunit protein uS5|Methanococcus maripaludis (strain C5

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 138 PHSIPF 143


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 128 PHSIPF 133


>sp|RS5_PICTO|SMALL ribosomal subunit protein uS5|Picrophilus torridus (strain ATCC

Query: 5 PHSLPF 10
PH+LPF
Sbjct: 123 PHTLPF 128


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 132 PHSIPF 137


>sp|RS5_PYRHO|SMALL ribosomal subunit protein uS5|Pyrococcus horikoshii (strain ATCC

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 138 PHSVPF 143


>sp|RS5_PYRFU|SMALL ribosomal subunit protein uS5|Pyrococcus furiosus (strain ATCC

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 138 PHSVPF 143


>sp|RS5_PYRCJ|SMALL ribosomal subunit protein uS5|Pyrobaculum calidifontis (strain DSM

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 127 PHSVPF 132


>sp|RS5_PYRAB|SMALL ribosomal subunit protein uS5|Pyrococcus abyssi (strain GE5 /

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 138 PHSVPF 143


>sp|RS5_PYRAE|SMALL ribosomal subunit protein uS5|Pyrobaculum aerophilum (strain ATCC

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 143 PHSVPF 148


>sp|RS5_PYRIL|SMALL ribosomal subunit protein uS5|Pyrobaculum islandicum (strain DSM

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 127 PHSVPF 132


>sp|RS5_PYRAR|SMALL ribosomal subunit protein uS5|Pyrobaculum arsenaticum (strain DSM

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 127 PHSVPF 132


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 VIVVPHSLP 9
VI+ PH+LP
Sbjct: 908 VILNPHALP 916


>sp|RS5_IGNH4|SMALL ribosomal subunit protein uS5|Ignicoccus hospitalis (strain KIN4/I

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 128 PHSVPF 133


>sp|RS5_HYPBU|SMALL ribosomal subunit protein uS5|Hyperthermus butylicus (strain DSM

Query: 5 PHSLPF 10
PHS+PF
Sbjct: 131 PHSVPF 136


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VIVVPHSLP 9
+I+ PH+LP
Sbjct: 906 IILNPHALP 914


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 VIVVPHSLP 9
+I+ PH+LP
Sbjct: 908 IILNPHALP 916


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 4 VPHSLP 9
VPH+LP
Sbjct: 287 VPHALP 292


>sp|AGO_METJA|PROTEIN argonaute|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IVVPHSLPF 10
I +PH PF
Sbjct: 621 IFLPHKTPF 629


>sp|RS5_NANEQ|SMALL ribosomal subunit protein uS5|Nanoarchaeum equitans (strain Kin4-M)

Query: 5 PHSLPF 10
PHS+P+
Sbjct: 138 PHSIPY 143


>sp|RS5_METJA|SMALL ribosomal subunit protein uS5|Methanocaldococcus jannaschii (strain

Query: 5 PHSLPF 10
PHS+P+
Sbjct: 126 PHSIPY 131


>sp|RF1_AERPE|PEPTIDE chain release factor subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 VIVVPHSL 8
VIVVP SL
Sbjct: 342 VIVVPESL 349


>sp|CFBD_METTH|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanothermobacter

Query: 4 VPHSLP 9
VPH+LP
Sbjct: 292 VPHALP 297


>sp|RS7_METST|SMALL ribosomal subunit protein uS7|Methanosphaera stadtmanae (strain

Query: 2 IVVPHSL 8
IVVPH++
Sbjct: 30 IVVPHTM 36


>sp|PELO_STAMF|PROTEIN pelota homolog|Staphylothermus marinus (strain ATCC 43588

Query: 1 VIVVPHS 7
+I+VPH+
Sbjct: 323 IIIVPHN 329


>sp|UBIX_METJA|FLAVIN prenyltransferase UbiX|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VIVVPHSLPF 10
+I++P +PF
Sbjct: 115 LIIMPREMPF 124




106|Sequence|526|535|HSLPFKVVVI

>sp|RS5_SACI1|SMALL ribosomal subunit protein uS5|Saccharolobus islandicus (strain

Query: 1 HSLPFKVV 8
HSLPFKVV
Sbjct: 132 HSLPFKVV 139


>sp|RS5_SACS2|SMALL ribosomal subunit protein uS5|Saccharolobus solfataricus (strain

Query: 1 HSLPFKVV 8
HSLPFKVV
Sbjct: 132 HSLPFKVV 139


>sp|RS5_ARCFU|SMALL ribosomal subunit protein uS5|Archaeoglobus fulgidus (strain ATCC

Query: 1 HSLPFKV 7
HSLPFKV
Sbjct: 124 HSLPFKV 130


>sp|RS5_SULTO|SMALL ribosomal subunit protein uS5|Sulfurisphaera tokodaii (strain DSM

Query: 1 HSLPFKV 7
HSLPFKV
Sbjct: 132 HSLPFKV 138


>sp|RS5_THEPD|SMALL ribosomal subunit protein uS5|Thermofilum pendens (strain DSM 2475

Query: 1 HSLPFKV 7
HS+PFKV
Sbjct: 124 HSIPFKV 130


>sp|RS5_CENSY|SMALL ribosomal subunit protein uS5|Cenarchaeum symbiosum (strain A)

Query: 1 HSLPFKV 7
HS+PFKV
Sbjct: 146 HSVPFKV 152


>sp|RS5_METS5|SMALL ribosomal subunit protein uS5|Metallosphaera sedula (strain ATCC

Query: 1 HSLPFKV 7
HSLPF V
Sbjct: 132 HSLPFLV 138


>sp|RS5_METKA|SMALL ribosomal subunit protein uS5|Methanopyrus kandleri (strain AV19 /

Query: 1 HSLPFKV 7
HS+PF++
Sbjct: 129 HSIPFEI 135


>sp|RS5_STAMF|SMALL ribosomal subunit protein uS5|Staphylothermus marinus (strain ATCC

Query: 1 HSLPFKV 7
HS+PF V
Sbjct: 133 HSIPFTV 139


>sp|RS5_THEKO|SMALL ribosomal subunit protein uS5|Thermococcus kodakarensis (strain

Query: 1 HSLPFKV 7
HS+PF V
Sbjct: 138 HSIPFAV 144


>sp|RFCS_SACS2|REPLICATION factor C small subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 LPFKVVVI 10
+PFKVV++
Sbjct: 104 IPFKVVLL 111


>sp|RGYR_ARCFU|REVERSE gyrase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 PFKVVV 9
PFKVVV
Sbjct: 894 PFKVVV 899


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 SLPFKVVVI 10
++PFKVV++
Sbjct: 102 NVPFKVVLL 110


>sp|RFCS_STAMF|REPLICATION factor C small subunit|Staphylothermus marinus (strain ATCC 43588

Query: 2 SLPFKVVVI 10
++PFK+V++
Sbjct: 106 NIPFKIVLL 114


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 HSLPFKVVVI 10
+++PFKV+++
Sbjct: 99 NNVPFKVILL 108


>sp|RFCS_AERPE|REPLICATION factor C small subunit|Aeropyrum pernix (strain ATCC 700893

Query: 3 LPFKVVVI 10
+PFK+V++
Sbjct: 103 IPFKIVLL 110


>sp|SYV_SACS2|VALINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 HSLPFKVVV 9
++LP KV+V
Sbjct: 325 YNLPIKVIV 333




107|Sequence|531|540|KVVVISAILA

***** No hits found ******


108|Sequence|536|545|SAILALVVLT

***** No hits found ******


109|Sequence|541|550|LVVLTIISLI

>sp|HTR2_HALSA|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 700922

Query: 1 LVVLTIISL 9
LV++TI+SL
Sbjct: 286 LVLITIVSL 294


>sp|HTR2_HALS3|SENSORY rhodopsin II transducer|Halobacterium salinarum (strain ATCC 29341

Query: 1 LVVLTIISL 9
LV++TI+SL
Sbjct: 286 LVLITIVSL 294




110|Sequence|546|555|IISLIILIML

>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 IISLIILIML 10
++S IIL+ML
Sbjct: 24 VLSTIILVML 33




111|Sequence|551|560|ILIMLWQKKP

>sp|RL5_METJA|LARGE ribosomal subunit protein uL5|Methanocaldococcus jannaschii

Query: 5 LWQKKP 10
LWQK P
Sbjct: 6 LWQKNP 11


>sp|SEPS_METLZ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LIMLWQKKP 10
L +W KKP
Sbjct: 198 LAQMWDKKP 206


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 1 ILIMLW 6
IL+MLW
Sbjct: 29 ILVMLW 34


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 3 IMLWQKKP 10
++LW+ KP
Sbjct: 177 LVLWEDKP 184


>sp|AATC_METAC|A-TYPE ATP synthase subunit C|Methanosarcina acetivorans (strain ATCC

Query: 1 ILIMLWQKKP 10
+L LW KKP
Sbjct: 3 LLERLWGKKP 12


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 MLWQKKP 10
+LW+ KP
Sbjct: 618 LLWENKP 624




112|Sequence|556|565|WQKKPRYEIR

>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 WQKKPRYE 8
W K PRY+
Sbjct: 398 WDKAPRYD 405


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 WQKKPRYE 8
W K PRY+
Sbjct: 398 WDKAPRYD 405


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 QKKPRYEI 9
QK+P YEI
Sbjct: 246 QKQPDYEI 253


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 243 EKKPRY 248


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 244 EKKPRY 249


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 235 EKKPRY 240


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 234 EKKPRY 239


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 237 EKKPRY 242


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 238 EKKPRY 243


>sp|HDRA1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit A|Methanosarcina acetivorans

Query: 2 QKKPRY 7
+KKPRY
Sbjct: 238 RKKPRY 243


>sp|DNLI_ARCFU|DNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QKKPRYE 8
QK P+YE
Sbjct: 508 QKSPKYE 514


>sp|DNLI_THEFM|DNA ligase|Thermococcus fumicolans

Query: 2 QKKPRYE 8
QK P+YE
Sbjct: 511 QKSPKYE 517




113|Sequence|561|570|RYEIRWKVIE

>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 RYEIRWK 7
RYE+RW+
Sbjct: 316 RYEMRWR 322


>sp|PC2DH_METBF|PRECORRIN-2 dehydrogenase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RYEIRWKVIE 10
R EI WKV+E
Sbjct: 183 RKEILWKVLE 192


>sp|GGR_METVS|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RYEIRWK 7
+YE RWK
Sbjct: 321 QYETRWK 327


>sp|PURQ_METMP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain DSM 14266

Query: 1 RYEIRW 6
RYE RW
Sbjct: 131 RYECRW 136


>sp|PURQ_METM7|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C7 /

Query: 1 RYEIRW 6
RYE RW
Sbjct: 131 RYECRW 136


>sp|PURQ_METM5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanococcus maripaludis (strain C5 /

Query: 1 RYEIRW 6
RYE RW
Sbjct: 128 RYECRW 133


>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 YEIRWKVIE 10
YE RWK +E
Sbjct: 494 YERRWKKME 502


>sp|GGR_METM5|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C5 /

Query: 2 YEIRWK 7
YE RWK
Sbjct: 322 YEKRWK 327


>sp|Y630_METJA|PUTATIVE phosphate permease MJ0630|Methanocaldococcus jannaschii (strain

Query: 4 IRWKVIE 10
+RWKV++
Sbjct: 267 VRWKVLK 273


>sp|SYI_METTM|ISOLEUCINE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 RYEIRWKVIE 10
RY++RW V E
Sbjct: 819 RYKLRWPVRE 828


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 5 RWKVIE 10
RWKVIE
Sbjct: 10 RWKVIE 15


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RYEIRWKVIE 10
RY++RW V E
Sbjct: 819 RYKLRWPVRE 828


>sp|FEN_METS3|FLAP endonuclease 1|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 YEIRWK 7
Y+IRWK
Sbjct: 279 YKIRWK 284


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 YEIRWKVI 9
YE+R KVI
Sbjct: 145 YEVRAKVI 152


>sp|FEN_METTH|FLAP endonuclease 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 YEIRWK 7
YEIRW+
Sbjct: 280 YEIRWR 285


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 YEIRWK 7
YE RWK
Sbjct: 323 YENRWK 328


>sp|PURL_PYRFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RYEIRWKVI 9
+YE+ W V+
Sbjct: 319 KYELEWSVV 327


>sp|PURL_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RYEIRWKVI 9
+YE+ W V+
Sbjct: 319 KYELEWSVV 327


>sp|AGLR_HALVD|PROBABLE flippase AglR|Haloferax volcanii (strain ATCC 29605

Query: 2 YEIRWKV 8
YE+ W++
Sbjct: 240 YEVAWRI 246


>sp|PURL_PYRAB|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrococcus abyssi (strain GE5 /

Query: 1 RYEIRWKVI 9
+YE+ W V+
Sbjct: 319 KYELEWAVV 327


>sp|MRE11_PYRAB|DNA double-strand break repair protein|Pyrococcus abyssi (strain GE5 /

Query: 3 EIRWKVIE 10
E+ WK+IE
Sbjct: 355 ELEWKIIE 362


>sp|Y1433_ARCFU|UPF0215 protein AF_1433|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YEIRWKVIE 10
YE+R K++E
Sbjct: 114 YELRRKIVE 122


>sp|RS12_THEPD|SMALL ribosomal subunit protein uS12|Thermofilum pendens (strain DSM 2475

Query: 4 IRWKVIE 10
+RWKVI+
Sbjct: 122 VRWKVIK 128


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RYEIRWKVI 9
+YE+ +KVI
Sbjct: 23 KYEVDYKVI 31


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 2 YEIRWKVI 9
YE+ W V+
Sbjct: 319 YELEWTVV 326




114|Sequence|566|575|WKVIESVSSD

>sp|MRE11_PYRHO|DNA double-strand break repair protein|Pyrococcus horikoshii (strain

Query: 1 WKVIESVSSD 10
WKVI+ SSD
Sbjct: 356 WKVIDLASSD 365


>sp|Y3533_METJA|UNCHARACTERIZED protein MJECL33|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KVIESVSSD 10
K+I+S+SSD
Sbjct: 187 KIIQSLSSD 195


>sp|Y482_METJA|UNCHARACTERIZED protein MJ0482|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WKVIESVSS 9
WK +ES++S
Sbjct: 49 WKKLESLTS 57


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 WKVIESVSSD 10
WK ++VS+D
Sbjct: 8 WKFWDNVSTD 17


>sp|RFCL_METMA|REPLICATION factor C large subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WKVIESVSSD 10
W+VIE +SD
Sbjct: 74 WEVIELNASD 83


>sp|Y1385_METMA|UPF0147 protein MM_1385|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WKVIESVSSD 10
+V+ES++SD
Sbjct: 17 LQVLESITSD 26


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WKVIESVSSD 10
W V++S+S++
Sbjct: 166 WDVVKSISTN 175


>sp|CPGS_THESM|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus sibiricus (strain

Query: 2 KVIESVSSD 10
K+IES++ D
Sbjct: 299 KIIESINPD 307




115|Sequence|571|580|SVSSDGHEYI

>sp|SYT_THEVO|THREONINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 5 DGHEYI 10
DGHE+I
Sbjct: 367 DGHEFI 372


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 SVSSDGHEYI 10
+V DGHE +
Sbjct: 773 AVKEDGHELV 782


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 2 VSSDGHEYI 10
+SS G EY+
Sbjct: 104 ISSSGKEYV 112


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 6 GHEYI 10
GHEYI
Sbjct: 462 GHEYI 466


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 1 SVSSDGHEYI 10
+V GHEY+
Sbjct: 194 NVPHRGHEYV 203


>sp|HPRL2_NATMM|HGPRTASE-LIKE protein 2|Natrialba magadii (strain ATCC 43099

Query: 2 VSSDGHEYI 10
V DG+EY+
Sbjct: 14 VDKDGYEYL 22




116|Sequence|576|585|GHEYIYVDPM

>sp|Y1679_METMP|UPF0179 protein MMP1679|Methanococcus maripaludis (strain DSM 14266

Query: 1 GHEYIYVDPM 10
G+E+IY+ P+
Sbjct: 15 GNEFIYLGPL 24


>sp|Y1728_METM5|UPF0179 protein MmarC5_1728|Methanococcus maripaludis (strain C5 /

Query: 1 GHEYIYVDPM 10
G+E+IY+ P+
Sbjct: 15 GNEFIYLGPL 24


>sp|Y993_METM6|UPF0179 protein MmarC6_0993|Methanococcus maripaludis (strain C6 /

Query: 1 GHEYIYVDPM 10
G+E+IY+ P+
Sbjct: 15 GNEFIYLGPL 24


>sp|Y952_METM7|UPF0179 protein MmarC7_0952|Methanococcus maripaludis (strain C7 /

Query: 1 GHEYIYVDPM 10
G+E+IY+ P+
Sbjct: 15 GNEFIYLGPL 24


>sp|DAPF_METM6|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C6 /

Query: 1 GHEYIYVDPM 10
G++YIYVD +
Sbjct: 10 GNDYIYVDAI 19


>sp|DAPF_METM5|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C5 /

Query: 1 GHEYIYVDPM 10
G++YIYVD +
Sbjct: 10 GNDYIYVDAI 19


>sp|DAPF_METMP|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain DSM 14266

Query: 1 GHEYIYVDPM 10
G++YIYVD +
Sbjct: 10 GNDYIYVDAI 19


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 4 YIYVDPM 10
YIYV+P+
Sbjct: 489 YIYVEPL 495


>sp|DAPF_METM7|DIAMINOPIMELATE epimerase|Methanococcus maripaludis (strain C7 /

Query: 1 GHEYIYVD 8
G++YIYVD
Sbjct: 10 GNDYIYVD 17


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 4 YIYVDPM 10
YIYV+P+
Sbjct: 489 YIYVEPL 495


>sp|RL15E_HALLT|LARGE ribosomal subunit protein eL15|Halorubrum lacusprofundi (strain

Query: 2 HEYIYVDP 9
HE I VDP
Sbjct: 130 HEVILVDP 137


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 GHEYIY 6
GHEYIY
Sbjct: 462 GHEYIY 467


>sp|METE_METTH|METHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GHEYIYVDP 9
G E +Y+DP
Sbjct: 275 GEENLYIDP 283


>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 5 IYVDPM 10
+YVDPM
Sbjct: 511 LYVDPM 516


Query: 4 YIYVDP 9
Y+Y DP
Sbjct: 419 YVYADP 424


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 5 IYVDPM 10
+YVDPM
Sbjct: 511 LYVDPM 516


Query: 4 YIYVDP 9
Y+Y DP
Sbjct: 419 YVYADP 424


>sp|RL15E_HALMA|LARGE ribosomal subunit protein eL15|Haloarcula marismortui (strain ATCC

Query: 2 HEYIYVDP 9
HE I +DP
Sbjct: 130 HEVILIDP 137


>sp|RL15E_HALWD|LARGE ribosomal subunit protein eL15|Haloquadratum walsbyi (strain DSM

Query: 2 HEYIYVDP 9
HE I +DP
Sbjct: 130 HEIILIDP 137


>sp|TRUD_METAC|PROBABLE tRNA pseudouridine synthase D|Methanosarcina acetivorans (strain

Query: 3 EYIYVDPM 10
EY+ VDP+
Sbjct: 431 EYMKVDPL 438


>sp|GLCD2_SACS2|GLUCOSE 1-dehydrogenase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 EYIYVDP 9
EY+Y DP
Sbjct: 128 EYLYDDP 134


>sp|TRUD_METBF|PROBABLE tRNA pseudouridine synthase D|Methanosarcina barkeri (strain Fusaro

Query: 3 EYIYVDPM 10
EY+ VDP+
Sbjct: 428 EYMKVDPL 435


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GHEYIYVDPM 10
G E+ VDP+
Sbjct: 211 GEEFFVVDPV 220


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 IYVDPM 10
+Y+DPM
Sbjct: 489 LYIDPM 494


>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GHEYIYVD 8
G++Y++VD
Sbjct: 485 GYDYVFVD 492


>sp|PIMT_META3|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 HEYIYVD 8
H+Y YVD
Sbjct: 42 HDYAYVD 48


>sp|HELS_PYRAB|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus abyssi (strain GE5 /

Query: 5 IYVDPM 10
+Y+DPM
Sbjct: 489 LYIDPM 494


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 3 EYIYVDP 9
EY+ VDP
Sbjct: 201 EYLLVDP 207


>sp|NEP1_PYRFU|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus furiosus (strain

Query: 3 EYIYVDP 9
E IYVDP
Sbjct: 95 EVIYVDP 101


>sp|HEM1_METMA|GLUTAMYL-TRNA reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 HEYIY 6
HEY+Y
Sbjct: 37 HEYVY 41


>sp|HEM1_METAC|GLUTAMYL-TRNA reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HEYIY 6
HEY+Y
Sbjct: 37 HEYVY 41


>sp|3MGH_METMJ|PUTATIVE 3-methyladenine DNA glycosylase|Methanoculleus marisnigri (strain

Query: 1 GHEYIY 6
GH Y+Y
Sbjct: 67 GHAYVY 72




117|Sequence|581|590|YVDPMQLPYD

>sp|G3P_HALVA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula vallismortis (Halobacterium

Query: 3 DPMQLPYD 10
DP QLP+D
Sbjct: 83 DPTQLPWD 90


>sp|MFNB_METS3|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 VDPMQLP 8
VDPM++P
Sbjct: 131 VDPMEIP 137


>sp|GUAAB_METMJ|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoculleus

Query: 3 DPMQLPYD 10
DP+ LPY+
Sbjct: 264 DPLLLPYE 271


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 3 DPMQLPYD 10
DP ++PYD
Sbjct: 68 DPKKIPYD 75


>sp|GUAAB_METPE|GMP synthase [glutamine-hydrolyzing] subunit B|Methanosphaerula

Query: 3 DPMQLPY 9
DP+++PY
Sbjct: 264 DPLEVPY 270


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 3 DPMQLPY 9
DP+ LPY
Sbjct: 190 DPVSLPY 196


>sp|RIFK_PYRAE|RIBOFLAVIN kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 VDPMQLPY 9
+DP LPY
Sbjct: 125 LDPQYLPY 132


>sp|ATGT_PYRFU|TRNA-GUANINE(15) transglycosylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YVDPMQLPYD 10
+ DP PYD
Sbjct: 533 FADPKIRPYD 542


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 1 YVDPMQLPYD 10
+ DP +LP D
Sbjct: 94 FQDPFELPLD 103


>sp|GVPD_HALMT|PROTEIN GvpD|Haloferax mediterranei (strain ATCC 33500

Query: 3 DPMQLPYD 10
DP +LP D
Sbjct: 96 DPFELPLD 103




118|Sequence|586|595|QLPYDSTWEL

>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 2 LPYDSTWEL 10
LPYD +W++
Sbjct: 163 LPYDGSWQM 171


>sp|GGR_METHJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LPYDSTW 8
+PYD TW
Sbjct: 322 MPYDETW 328


>sp|GGR_METMJ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPYDSTW 8
+PYD+ W
Sbjct: 322 MPYDAEW 328


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QLPYDSTW 8
+LPY +TW
Sbjct: 101 ELPYCATW 108


>sp|FLAJ_METVO|FLAGELLA accessory protein J|Methanococcus voltae

Query: 1 QLPYDSTW 8
+LPYD W
Sbjct: 245 KLPYDRLW 252


>sp|MRE11_SULTO|DNA double-strand break repair protein|Sulfurisphaera tokodaii (strain

Query: 2 LPYDSTWEL 10
LPY+ W++
Sbjct: 166 LPYEGAWQI 174


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 179 VPYEDTW 185


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 2 LPYDSTWEL 10
LPY W++
Sbjct: 163 LPYQGAWQI 171


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QLPYDSTW 8
+LP+D+ W
Sbjct: 519 KLPFDTNW 526


>sp|Y812_ARCFU|UNCHARACTERIZED protein AF_0812|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PYDSTWE 9
PYD+ WE
Sbjct: 122 PYDTKWE 128


>sp|QUEC_THEAC|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 182 VPYEKTW 188


>sp|QUEC_METLZ|7-CYANO-7-DEAZAGUANINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 180 VPYEHTW 186


>sp|FAU1_HALWD|PROBABLE ribonuclease FAU-1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LPYDST 7
LPYDST
Sbjct: 147 LPYDST 152


>sp|CARA_SACS2|CARBAMOYL phosphate synthase small chain|Saccharolobus solfataricus (strain

Query: 3 PYDSTW 8
P+D+TW
Sbjct: 350 PWDTTW 355


>sp|CARA_HALSA|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain ATCC

Query: 1 QLPYDST 7
+LPYD+T
Sbjct: 191 RLPYDAT 197


>sp|CARA_HALS3|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain ATCC

Query: 1 QLPYDST 7
+LPYD+T
Sbjct: 191 RLPYDAT 197


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QLPYDSTWEL 10
QLP + WEL
Sbjct: 352 QLPQYAEWEL 361


>sp|RPIA_KORCO|RIBOSE-5-PHOSPHATE isomerase A|Korarchaeum cryptofilum (strain OPF8)

Query: 2 LPYDSTWEL 10
LPY +W L
Sbjct: 136 LPYGVSWTL 144


>sp|GATE_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Archaeoglobus fulgidus (strain ATCC

Query: 2 LPYDSTWEL 10
LP D WE+
Sbjct: 456 LPKDLAWEI 464


>sp|AOR_PYRHO|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus horikoshii (strain

Query: 4 YDSTWEL 10
Y+STW L
Sbjct: 312 YESTWAL 318


>sp|AOR_PYRAB|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus abyssi (strain GE5 /

Query: 4 YDSTWEL 10
Y+STW L
Sbjct: 312 YESTWAL 318


>sp|QUEC_METMJ|7-CYANO-7-DEAZAGUANINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 180 VPYELTW 186


>sp|SEPS_METAC|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 QLPYDSTWEL 10
Q+P S WE+
Sbjct: 352 QIPQYSEWEM 361


>sp|CMR2_PYRFU|CRISPR system Cmr subunit Cmr2|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPYDSTWE 9
L Y STWE
Sbjct: 548 LYYSSTWE 555


>sp|QUEC_THEVO|7-CYANO-7-DEAZAGUANINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 181 VPYELTW 187


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 3 PYDSTWEL 10
PY + WE+
Sbjct: 83 PYGNGWEI 90


>sp|SEPS_METMA|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QLPYDSTWEL 10
Q+P S WE+
Sbjct: 352 QIPQYSEWEM 361


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 5 DSTWE 9
DSTWE
Sbjct: 282 DSTWE 286


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 PYDSTWE 9
PY+ +WE
Sbjct: 402 PYNKSWE 408


>sp|RS3A_IGNH4|SMALL ribosomal subunit protein eS1|Ignicoccus hospitalis (strain

Query: 1 QLPYDSTWEL 10
Q P D W+L
Sbjct: 34 QTPADEAWKL 43


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 YDSTW 8
YD+TW
Sbjct: 324 YDNTW 328


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPYDSTW 8
LP+D W
Sbjct: 523 LPFDENW 529


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LPYDSTW 8
LP+D W
Sbjct: 523 LPFDENW 529


>sp|Y704_METJA|UNCHARACTERIZED protein MJ0704|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YDSTWEL 10
YDS W L
Sbjct: 49 YDSLWSL 55


>sp|QUEC_HALSA|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 182 VPYEHTW 188


>sp|QUEC_HALS3|7-CYANO-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 182 VPYEHTW 188


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QLPYDSTW 8
+LP+D W
Sbjct: 496 KLPFDDRW 503


>sp|QUEC_ARCFU|7-CYANO-7-DEAZAGUANINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPYDSTW 8
+PY+ TW
Sbjct: 176 VPYELTW 182


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LPYDSTW 8
LP+D W
Sbjct: 523 LPFDENW 529


>sp|DHYS_IGNH4|PROBABLE deoxyhypusine synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PYDSTWEL 10
PY+ WE+
Sbjct: 157 PYELIWEV 164


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QLPYDSTW 8
+LP+D W
Sbjct: 496 RLPFDDRW 503


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LPYDSTW 8
LP+D+ W
Sbjct: 507 LPFDNQW 513


>sp|SYT_HYPBU|THREONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 QLPYDSTW 8
Q PY TW
Sbjct: 489 QTPYIPTW 496


>sp|ACDB_METKA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanopyrus kandleri

Query: 2 LPYDSTWE 9
L YD WE
Sbjct: 345 LQYDGGWE 352


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 QLPYDSTWEL 10
+LP D W L
Sbjct: 34 ELPVDFVWAL 43


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 QLPYDSTW 8
+LP+D W
Sbjct: 523 RLPFDPEW 530




119|Sequence|591|600|STWELPRDQL

>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WELPRD 8
WELP+D
Sbjct: 13 WELPKD 18


>sp|Y362_METJA|UNCHARACTERIZED protein MJ0362|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TWELPRD 8
TW LP+D
Sbjct: 7 TWRLPKD 13


>sp|RS4E_METJA|SMALL ribosomal subunit protein eS4|Methanocaldococcus jannaschii

Query: 3 WELPR 7
WELPR
Sbjct: 19 WELPR 23


>sp|RS4E_METVS|SMALL ribosomal subunit protein eS4|Methanococcus vannielii (strain

Query: 1 STWELPRDQ 9
+ W+LPR +
Sbjct: 17 ANWQLPRKE 25


>sp|RS4E_METVA|SMALL ribosomal subunit protein eS4|Methanococcus vannielii

Query: 1 STWELPRDQ 9
+ W+LPR +
Sbjct: 17 ANWQLPRKE 25


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 3 WELPRD 8
WELP D
Sbjct: 16 WELPED 21


>sp|FTSZ2_PYRFU|CELL division protein FtsZ 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 STWELPRDQ 9
S+W +P+D+
Sbjct: 360 SSWVVPKDR 368


>sp|SYA_HYPBU|ALANINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 WELPR 7
WELPR
Sbjct: 51 WELPR 55


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 STWELPR 7
+ W+LPR
Sbjct: 17 ANWQLPR 23


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 STWELPR 7
+ W+LPR
Sbjct: 17 ANWQLPR 23


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 STWELPR 7
+ W+LPR
Sbjct: 17 ANWQLPR 23


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 STWELPR 7
+ W+LPR
Sbjct: 17 ANWQLPR 23


>sp|SYFB_METST|PHENYLALANINE--TRNA ligase beta subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 4 ELPRDQL 10
ELP+D+L
Sbjct: 18 ELPKDEL 24


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 3 WELPRDQ 9
WEL RD+
Sbjct: 187 WELGRDR 193


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 WELPRDQL 10
W LP D+L
Sbjct: 1445 WNLPWDKL 1452


>sp|RL32_HALMA|LARGE ribosomal subunit protein eL32|Haloarcula marismortui (strain ATCC

Query: 1 STWELPRDQL 10
++W PR QL
Sbjct: 142 TSWRKPRGQL 151


>sp|Y1590_CALMQ|MEMO1 family protein Cmaq_1590|Caldivirga maquilingensis (strain ATCC

Query: 2 TWELPRDQL 10
TWE P Q+
Sbjct: 101 TWETPLGQV 109


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 2 TWELPRDQL 10
TW++P++ L
Sbjct: 471 TWKVPKELL 479


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TWELPRDQL 10
TW++P++ L
Sbjct: 467 TWKVPKELL 475


>sp|RFCL_THEKO|REPLICATION factor C large subunit|Thermococcus kodakarensis (strain ATCC

Query: 3 WELPRD 8
WE+PR+
Sbjct: 140 WEVPRE 145


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 ELPRDQL 10
E+PRD+L
Sbjct: 1383 EIPRDKL 1389


>sp|FEN_HALWD|FLAP endonuclease 1|Haloquadratum walsbyi (strain DSM 16790

Query: 3 WELPRDQL 10
WE+P D++
Sbjct: 299 WEVPADEV 306


>sp|GLNA1_METMA|GLUTAMINE synthetase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TWELPRDQL 10
+W +P +QL
Sbjct: 38 SWAIPAEQL 46


>sp|CDPAS_METB6|CDP-ARCHAEOL synthase|Methanoregula boonei (strain DSM 21154

Query: 3 WELPRDQL 10
W+LPR +
Sbjct: 65 WDLPRQTI 72




120|Sequence|596|605|PRDQLVLGRT

>sp|RS24_METHJ|SMALL ribosomal subunit protein eS24|Methanospirillum hungatei JF-1

Query: 1 PRDQLVLG 8
P+DQLV+G
Sbjct: 46 PKDQLVIG 53


>sp|HIS8_METLZ|HISTIDINOL-PHOSPHATE aminotransferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RDQLVLGRT 10
RD L++GRT
Sbjct: 204 RDNLIIGRT 212


>sp|SPEE_PYRIL|POLYAMINE aminopropyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 PRDQLVLG 8
PRD L+LG
Sbjct: 81 PRDVLILG 88


>sp|SPEE_PYRCJ|POLYAMINE aminopropyltransferase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 PRDQLVLG 8
PRD L+LG
Sbjct: 81 PRDVLILG 88


>sp|SPEE_PYRAR|POLYAMINE aminopropyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 PRDQLVLG 8
PRD L+LG
Sbjct: 81 PRDVLILG 88


>sp|HIS5_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 1 PRDQLVLGRT 10
P D +VLG T
Sbjct: 147 PEDDVVLGET 156


>sp|CETZ6_HALVD|TUBULIN-LIKE protein CetZ6|Haloferax volcanii (strain ATCC 29605

Query: 1 PRDQLVLGR 9
PRD V+GR
Sbjct: 242 PRDTSVVGR 250


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 RDQLVLG 8
RD+LVLG
Sbjct: 244 RDELVLG 250


>sp|PUR8_METTH|ADENYLOSUCCINATE lyase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RDQLVLGRT 10
RD++ +GRT
Sbjct: 141 RDRVCIGRT 149




121|Sequence|601|610|VLGRTLGSGA

>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 VLGRTLGSGA 10
VLGR LG+GA
Sbjct: 160 VLGRELGAGA 169


>sp|RNH2_METTP|RIBONUCLEASE HII|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LGRTLGSG 9
LGR LGSG
Sbjct: 164 LGRPLGSG 171


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 LGRTLGSGA 10
LG+ GSGA
Sbjct: 140 LGQAFGSGA 148


>sp|SYDND_METST|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 VLGRTLGS 8
VLG T+GS
Sbjct: 318 VLGETMGS 325


>sp|PUS10_IGNAA|TRNA pseudouridine synthase Pus10|Ignisphaera aggregans (strain DSM

Query: 4 RTLGSG 9
RTLGSG
Sbjct: 257 RTLGSG 262


>sp|PURL_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus kodakarensis (strain ATCC

Query: 1 VLGRTLGSGA 10
V+GR GSGA
Sbjct: 672 VIGRAGGSGA 681


>sp|Y312_METJA|UNCHARACTERIZED protein MJ0312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LGRTLGSGA 10
L +TLGSGA
Sbjct: 57 LAKTLGSGA 65


>sp|PURO_THEKO|IMP cyclohydrolase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LGRTLGSG 9
+GRTLG G
Sbjct: 4 VGRTLGIG 11


>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 VLGRTLGS 8
+LGR++GS
Sbjct: 90 ILGRSIGS 97




122|Sequence|606|615|LGSGAFGQVV

>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LGSGAFG 7
LGSGAF
Sbjct: 200 LGSGAFA 206


>sp|RIFK_METST|RIBOFLAVIN kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GSGAFGQVV 10
G+G+FG V+
Sbjct: 65 GNGSFGDVL 73


>sp|IPK_METJA|ISOPENTENYL phosphate kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GSGAFGQVV 10
G GAFG V
Sbjct: 54 GGGAFGHPV 62


>sp|GPDA_METTH|GLYCEROL-3-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothermobacter thermautotrophicus

Query: 1 LGSGAFGQVV 10
+G+G+FG +
Sbjct: 6 IGAGSFGTAI 15


>sp|Y38K_THETE|UNCHARACTERIZED 38 kDa protein in|Thermoproteus tenax

Query: 1 LGSGAFGQV 9
LGS AFG V
Sbjct: 325 LGSAAFGYV 333




123|Sequence|611|620|FGQVVEATAH

>sp|GLNA_SACS2|GLUTAMINE synthetase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FGQVVEATAH 10
FG +EAT H
Sbjct: 199 FGYTIEATHH 208


>sp|PDXS_METST|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanosphaera stadtmanae

Query: 4 VVEATAH 10
VVEATAH
Sbjct: 250 VVEATAH 256


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FGQVVEATAH 10
G+V++AT H
Sbjct: 198 LGEVIDATIH 207


>sp|HDRE_METAC|DIHYDROMETHANOPHENAZINE:COB--COM heterodisulfide reductase subunit E|Methanosarcina acetivorans

Query: 1 FGQVVEATAH 10
+GQVVE + H
Sbjct: 71 WGQVVEESHH 80


>sp|PDXS_METTH|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanothermobacter

Query: 4 VVEATAH 10
+VEATAH
Sbjct: 250 IVEATAH 256


>sp|CARA_HALSA|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain

Query: 2 GQVVEATAH 10
G VVEATA
Sbjct: 11 GDVVEATAR 19


>sp|CARA_HALS3|CARBAMOYL phosphate synthase small chain|Halobacterium salinarum (strain

Query: 2 GQVVEATAH 10
G VVEATA
Sbjct: 11 GDVVEATAR 19


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 FGQVVEATA 9
FG +V+ATA
Sbjct: 260 FGDLVDATA 268


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 1 FGQVVEAT 8
FG+V+E+T
Sbjct: 54 FGEVMEST 61


>sp|AATE_THEPD|A-TYPE ATP synthase subunit E|Thermofilum pendens (strain DSM 2475

Query: 2 GQVVEATA 9
GQVVEA A
Sbjct: 145 GQVVEAVA 152


>sp|AGLB3_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FGQVVEATAH 10
+G +EA AH
Sbjct: 553 YGHWIEAVAH 562


>sp|RS3A_METM7|SMALL ribosomal subunit protein eS1|Methanococcus maripaludis (strain C7

Query: 1 FGQVVEA 7
FG+VVEA
Sbjct: 199 FGKVVEA 205




124|Sequence|616|625|EATAHGLSHS

>sp|PYRD_NATPD|DIHYDROOROTATE dehydrogenase (quinone)|Natronomonas pharaonis (strain ATCC 35678

Query: 3 TAHGLSH 9
TAHGL H
Sbjct: 18 TAHGLGH 24


>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 1 EATAHGLSH 9
EAT H LSH
Sbjct: 20 EATVHVLSH 28


>sp|PUR5_PYRHO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EATAHGLSH 9
E HGL+H
Sbjct: 231 EVEVHGLAH 239


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EATAHGLSH 9
E HGL+H
Sbjct: 229 ECEVHGLAH 237


>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 3 TAHGLSHS 10
+AHGL H+
Sbjct: 48 SAHGLEHA 55


>sp|XERA_THEKO|TYROSINE recombinase XerA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EATAHGLSHS 10
E T H L HS
Sbjct: 219 EVTPHKLRHS 228


>sp|NFI_NANEQ|BIFUNCTIONAL methyltransferase-like/endonuclease|Nanoarchaeum equitans (strain

Query: 4 AHGLSH 9
HGLSH
Sbjct: 198 GHGLSH 203


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 AHGLSH 9
HGLSH
Sbjct: 108 GHGLSH 113


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EATAHGLSH 9
E HGL+H
Sbjct: 235 ECDVHGLAH 243




125|Sequence|621|630|GLSHSQATMK

>sp|GSA_METAR|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocella arvoryzae (strain DSM 22066

Query: 2 LSHSQATMK 10
L+HSQA M+
Sbjct: 404 LAHSQADME 412




126|Sequence|626|635|QATMKVAVKM

***** No hits found ******


127|Sequence|631|640|VAVKMLKSTA

>sp|Y427_METAR|UPF0173 metal-dependent hydrolase UNCMA_04270|Methanocella arvoryzae

Query: 1 VAVKMLK 7
+AVKMLK
Sbjct: 178 IAVKMLK 184




128|Sequence|636|645|LKSTARSSEK

***** No hits found ******


129|Sequence|641|650|RSSEKQALMS

***** No hits found ******


130|Sequence|646|655|QALMSELKIM

>sp|RS4_METS5|SMALL ribosomal subunit protein uS4|Metallosphaera sedula (strain ATCC

Query: 1 QALMSELKIM 10
QAL SE KIM
Sbjct: 21 QALKSEQKIM 30




131|Sequence|651|660|ELKIMSHLGP

>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 4 IMSHLGP 10
+MSHLGP
Sbjct: 129 VMSHLGP 135


>sp|MTRE_METKA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 4 IMSHLGP 10
++SHLGP
Sbjct: 128 VLSHLGP 134


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 4 IMSHLGP 10
+M HLGP
Sbjct: 129 MMGHLGP 135


>sp|GSA_HYPBU|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Hyperthermus butylicus (strain DSM 5456

Query: 3 KIMSHLGP 10
KIM HL P
Sbjct: 281 KIMEHLTP 288


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ELKIMSHLG 9
E+K+ HLG
Sbjct: 93 EVKVEEHLG 101




132|Sequence|656|665|SHLGPHLNVV

>sp|FEOB_METJA|FE(2+) transporter FeoB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PHLNVV 10
PHLNVV
Sbjct: 492 PHLNVV 497


>sp|RL31_NATPD|LARGE ribosomal subunit protein eL31|Natronomonas pharaonis (strain

Query: 1 SHLGPHLNV 9
SHL H NV
Sbjct: 35 SHLAQHFNV 43


>sp|SYR_METBU|ARGININE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LGPHLNV 9
LGP+LN+
Sbjct: 78 LGPYLNI 84


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 HLGPHLNVV 10
HLGP N V
Sbjct: 229 HLGPMANTV 237


>sp|EF1A_DESMO|ELONGATION factor 1-alpha|Desulfurococcus mucosus (Desulfurococcus mobilis)

Query: 5 PHLNVV 10
PHLN+V
Sbjct: 7 PHLNIV 12


>sp|OFOB2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Aeropyrum pernix (strain ATCC

Query: 5 PHLNVV 10
PHLNV+
Sbjct: 83 PHLNVI 88


>sp|END4_NITMS|PROBABLE endonuclease 4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SHLGPHL 7
+HLG HL
Sbjct: 107 THLGSHL 113


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 1 SHLGPHL 7
+HLG HL
Sbjct: 107 THLGSHL 113


>sp|EF1A_THEPD|ELONGATION factor 1-alpha|Thermofilum pendens (strain DSM 2475

Query: 5 PHLNVV 10
PHLN+V
Sbjct: 6 PHLNLV 11


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 LGPHLNVV 10
+ PHLN++
Sbjct: 35 INPHLNLI 42


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 5 PHLNVV 10
PHLN+V
Sbjct: 308 PHLNLV 313


>sp|EF1A_STAMF|ELONGATION factor 1-alpha|Staphylothermus marinus (strain ATCC 43588

Query: 5 PHLNVV 10
PHLN+V
Sbjct: 6 PHLNLV 11


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 PHLNVV 10
PH+N+V
Sbjct: 203 PHINIV 208




133|Sequence|661|670|HLNVVNLLGA

>sp|PYRI_METTH|ASPARTATE carbamoyltransferase regulatory chain|Methanothermobacter

Query: 2 LNVVNLLG 9
LNV+N+LG
Sbjct: 29 LNVLNILG 36


>sp|RS4_METPE|SMALL ribosomal subunit protein uS4|Methanosphaerula palustris (strain

Query: 1 HLNVVNLLG 9
HLN + LLG
Sbjct: 81 HLNRIGLLG 89


>sp|DAPAL_PYRIL|UNCHARACTERIZED DapA-like lyase Pisl_0309|Pyrobaculum islandicum (strain DSM 4184

Query: 1 HLNVVNLLG 9
HL++++LLG
Sbjct: 171 HLDLIHLLG 179


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HLNVVNLLG 9
H+N NLLG
Sbjct: 366 HVNFRNLLG 374


>sp|DAPAL_PYRNV|UNCHARACTERIZED DapA-like lyase Tneu_1812|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 HLNVVNLLG 9
HL++++LLG
Sbjct: 171 HLDLIHLLG 179


>sp|MFNA_METKA|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanopyrus kandleri (strain

Query: 1 HLNVVNL 7
HLN+VN+
Sbjct: 309 HLNLVNI 315


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HLNVVNLLG 9
HL++++LLG
Sbjct: 171 HLDLIHLLG 179


>sp|Y1383_METJA|UNCHARACTERIZED protein MJ1383|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HLNVVNLLG 9
H N VNL G
Sbjct: 245 HKNAVNLFG 253




134|Sequence|666|675|NLLGACTKGG

>sp|SYDND_METJA|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LLGACTKGG 10
L+ +CT+GG
Sbjct: 170 LVASCTEGG 178


>sp|CBIHC_ARCFU|COBALAMIN biosynthesis protein CbiHC|Archaeoglobus fulgidus (strain ATCC

Query: 3 LGACTKGG 10
+GA TKGG
Sbjct: 258 MGASTKGG 265


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 2 LLGACTKG 9
LG+CT G
Sbjct: 295 FLGSCTNG 302


>sp|NADE_METB6|NH(3)-DEPENDENT NAD(+) synthetase|Methanoregula boonei (strain DSM 21154

Query: 2 LLGACTKGG 10
+LG CTK G
Sbjct: 141 MLGYCTKYG 149


>sp|HACA_METTH|PROBABLE methanogen homoaconitase large subunit|Methanothermobacter

Query: 2 LLGACTKG 9
LG+CT G
Sbjct: 300 FLGSCTNG 307


>sp|PHAC_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaC|Haloferax mediterranei (strain ATCC 33500

Query: 1 NLLGACTKG 9
NLLG C G
Sbjct: 145 NLLGYCMGG 153


>sp|MBHJ_PYRFU|PROBABLE membrane-bound hydrogenase subunit mbhJ|Pyrococcus furiosus (strain

Query: 3 LGACTKGG 10
+GAC GG
Sbjct: 99 IGACPTGG 106


>sp|DGGGP_PYRAB|DIGERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LLGACTKG 9
LLGA TKG
Sbjct: 269 LLGALTKG 276


>sp|Y206_METKA|UPF0280 protein MK0206|Methanopyrus kandleri (strain AV19 /

Query: 2 LLGACTKGG 10
+LG CT G
Sbjct: 137 VLGVCTSSG 145


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 NLLGACTK 8
++LGAC K
Sbjct: 565 HILGACIK 572


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LLGACTKG 9
++G+CT G
Sbjct: 299 VIGSCTNG 306




135|Sequence|671|680|CTKGGPIYII

>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 4 GGPIYI 9
GGPIYI
Sbjct: 477 GGPIYI 482


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TKGGPIYI 9
+KGG IYI
Sbjct: 288 SKGGSIYI 295


>sp|DAPF_METTP|DIAMINOPIMELATE epimerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 TKGGPIYI 9
TKGGP+ I
Sbjct: 242 TKGGPLRI 249


>sp|NADM_METBF|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CTKGGPIYI 9
C K P+YI
Sbjct: 113 CVKQSPLYI 121


>sp|PUR2_THEGJ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 TKGGPIYI 9
+KGGP+ I
Sbjct: 278 SKGGPVLI 285


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 3 KGGPIYI 9
K GPIY+
Sbjct: 144 KDGPIYV 150


>sp|THIC_IGNH4|PHOSPHOMETHYLPYRIMIDINE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 TKGGPIYII 10
T+G P YI+
Sbjct: 288 TEGAPYYIL 296


>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 CTKGGPIYII 10
C K G +YI+
Sbjct: 122 CVKCGSVYIL 131


>sp|NADM_METMA|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CTKGGPIYI 9
C K P+Y+
Sbjct: 113 CVKESPLYV 121


>sp|NADM_METAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 CTKGGPIYI 9
C K P+Y+
Sbjct: 113 CVKESPLYV 121


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 3 KGGPIYII 10
+GG IYI+
Sbjct: 301 EGGKIYIV 308


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 4 GGPIYII 10
GG IYII
Sbjct: 647 GGDIYII 653


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 TKGGPIYI 9
T GP+YI
Sbjct: 767 TVNGPVYI 774


>sp|CARB_METBA|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri

Query: 3 KGGPIYII 10
KGG +Y++
Sbjct: 150 KGGKVYVL 157


>sp|SLAB_ACIAM|S-LAYER protein B|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 1 CTKGGPIYII 10
C++ PIY+I
Sbjct: 129 CSETIPIYVI 138


>sp|IF2P_SACS2|PROBABLE translation initiation factor IF-2|Saccharolobus solfataricus

Query: 4 GGPIYII 10
G PIY++
Sbjct: 327 GSPIYVV 333


>sp|Y476_AERPE|UPF0215 protein APE_0476.1|Aeropyrum pernix (strain ATCC 700893

Query: 2 TKGGPIYII 10
T GP+Y++
Sbjct: 134 TPHGPVYLV 142


>sp|CHEB_METMP|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanococcus

Query: 3 KGGPIYII 10
+GG +YII
Sbjct: 257 RGGNVYII 264




136|Sequence|676|685|PIYIITEYCR

>sp|CBIT_PYRCJ|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 PIYIITEY 8
P+YIIT Y
Sbjct: 187 PVYIITAY 194


>sp|CBIT_PYRAE|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 PIYIITEY 8
P+YIIT Y
Sbjct: 188 PVYIITAY 195


>sp|UPPS_PYRAE|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Pyrobaculum

Query: 2 IYIITEYCR 10
+YII EY R
Sbjct: 223 VYIIEEYSR 231


>sp|TOP6A_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIYIITE 7
P+YIIT+
Sbjct: 254 PVYIITD 260


>sp|MPTA_HALSA|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIYIITEYC 9
PIY + E C
Sbjct: 80 PIYRVEEMC 88


>sp|MPTA_HALS3|GTP cyclohydrolase MptA|Halobacterium salinarum (strain ATCC 29341

Query: 1 PIYIITEYC 9
PIY + E C
Sbjct: 80 PIYRVEEMC 88


>sp|SYR_METS3|ARGININE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IYIITEYCR 10
I+ IT+YC+
Sbjct: 517 IHNITQYCQ 525


>sp|FPOH_METBF|F(420)H(2) dehydrogenase subunit H|Methanosarcina barkeri (strain Fusaro /

Query: 5 ITEYC 9
ITEYC
Sbjct: 237 ITEYC 241


>sp|NOP10_HALSA|RIBOSOME biogenesis protein Nop10|Halobacterium salinarum (strain ATCC

Query: 1 PIYIITEYC 9
P+Y ++E C
Sbjct: 18 PVYTLSETC 26


>sp|NOP10_HALS3|RIBOSOME biogenesis protein Nop10|Halobacterium salinarum (strain ATCC

Query: 1 PIYIITEYC 9
P+Y ++E C
Sbjct: 18 PVYTLSETC 26


>sp|TOP6A_SACSH|TYPE 2 DNA topoisomerase 6|Saccharolobus shibatae (strain ATCC 51178

Query: 1 PIYIITE 7
P+YI+T+
Sbjct: 255 PVYILTD 261


>sp|DP2L_METVS|DNA polymerase II large subunit|Methanococcus vannielii (strain ATCC

Query: 2 IYIITEYCR 10
+Y I E CR
Sbjct: 24 LYFIAEECR 32


>sp|MPTA_METTP|GTP cyclohydrolase MptA|Methanothrix thermoacetophila (strain DSM

Query: 1 PIYIITEYC 9
P+Y I E C
Sbjct: 79 PVYEIEELC 87


>sp|AATC_METBU|A-TYPE ATP synthase subunit C|Methanococcoides burtonii (strain DSM 6242

Query: 3 YIITEYCR 10
Y+I+EY R
Sbjct: 104 YLISEYLR 111


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 2 IYIITEY 8
+YIIT+Y
Sbjct: 371 VYIITKY 377


>sp|TOP6A_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PIYIITE 7
P+YI+T+
Sbjct: 253 PVYILTD 259


>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIYIIT 6
PIY+IT
Sbjct: 724 PIYVIT 729


>sp|TOP6A_HYPBU|TYPE 2 DNA topoisomerase 6|Hyperthermus butylicus (strain DSM 5456

Query: 1 PIYIITE 7
P+YI+T+
Sbjct: 253 PVYILTD 259




137|Sequence|681|690|TEYCRYGDLV

>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 EYCRYGDL 9
EY +YGDL
Sbjct: 269 EYLKYGDL 276


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EYCRYGDL 9
EYC+ GD+
Sbjct: 228 EYCKAGDM 235


>sp|MCRW_METJA|METHYL-COENZYME M reductase II operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TEYCRYGDL 9
T+Y +YGD+
Sbjct: 134 TDYMKYGDI 142


>sp|Y1401_METJA|PROBABLE ATP-dependent helicase MJ1401|Methanocaldococcus jannaschii (strain

Query: 4 CRYGDL 9
CRYG+L
Sbjct: 117 CRYGNL 122


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 2 EYCRYGDL 9
+YC+ GD+
Sbjct: 228 DYCKAGDM 235


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 EYCRYGDL 9
+YC+ GD+
Sbjct: 228 DYCKAGDM 235


>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 EYCRYGDL 9
EY RY DL
Sbjct: 269 EYLRYKDL 276


>sp|SOR_PYRHO|SUPEROXIDE reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EYCRYGDLV 10
EY R GDLV
Sbjct: 21 EYEREGDLV 29


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CRYGDLV 10
C YGD+V
Sbjct: 148 CGYGDIV 154


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CRYGDLV 10
CRY D++
Sbjct: 323 CRYSDII 329


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 CRYGD 8
CRYGD
Sbjct: 298 CRYGD 302


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 YCRYGDLV 10
+C GDLV
Sbjct: 42 FCTVGDLV 49


>sp|MCRD_METJA|METHYL-COENZYME M reductase I operon|Methanocaldococcus jannaschii (strain ATCC

Query: 1 TEYCRYGD 8
T+Y +YG+
Sbjct: 120 TDYIKYGE 127


>sp|MCRD_METVO|METHYL-COENZYME M reductase operon protein|Methanococcus voltae

Query: 1 TEYCRYGD 8
T+Y +YG+
Sbjct: 118 TDYMKYGE 125




138|Sequence|686|695|YGDLVDYLHR

>sp|RFCS_HALWD|REPLICATION factor C small subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 GDLVDYLHR 10
GD++D LHR
Sbjct: 594 GDIIDQLHR 602


>sp|RFCS_HALMA|REPLICATION factor C small subunit|Haloarcula marismortui (strain ATCC 43049

Query: 2 GDLVDYLHR 10
GD++D LHR
Sbjct: 270 GDIIDQLHR 278


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 GDLVDYLHR 10
GD++D LHR
Sbjct: 268 GDIIDQLHR 276


>sp|Y505_METJA|UNCHARACTERIZED protein MJ0505|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGDLVDYLHR 10
Y + VDYLH+
Sbjct: 86 YPEFVDYLHK 95


>sp|RFCS_HALSA|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 700922

Query: 2 GDLVDYLHR 10
GD++D +HR
Sbjct: 266 GDIIDQVHR 274


>sp|RFCS_HALS3|REPLICATION factor C small subunit|Halobacterium salinarum (strain ATCC 29341

Query: 2 GDLVDYLHR 10
GD++D +HR
Sbjct: 266 GDIIDQVHR 274


>sp|TRUB_THEON|PROBABLE tRNA pseudouridine synthase B|Thermococcus onnurineus (strain NA1)

Query: 3 DLVDYLH 9
DLVDY H
Sbjct: 219 DLVDYYH 225


>sp|TRUB_THEKO|PROBABLE tRNA pseudouridine synthase B|Thermococcus kodakarensis (strain

Query: 3 DLVDYLH 9
DLVDY H
Sbjct: 219 DLVDYYH 225


>sp|TRUB_THEGJ|PROBABLE tRNA pseudouridine synthase B|Thermococcus gammatolerans (strain

Query: 3 DLVDYLH 9
DLVDY H
Sbjct: 219 DLVDYYH 225


>sp|TRUB_PYRAB|PROBABLE tRNA pseudouridine synthase B|Pyrococcus abyssi (strain GE5 /

Query: 3 DLVDYLH 9
DLVDY H
Sbjct: 219 DLVDYYH 225


>sp|TRUB_PYRHO|PROBABLE tRNA pseudouridine synthase B|Pyrococcus horikoshii (strain ATCC

Query: 3 DLVDYLH 9
DLVDY H
Sbjct: 219 DLVDYYH 225


>sp|SDO1_ARCFU|RIBOSOME maturation protein SDO1 homolog|Archaeoglobus fulgidus (strain ATCC

Query: 1 YGDLVDYLHR 10
YGDL+D L +
Sbjct: 210 YGDLMDLLGK 219


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 3 DLVDYLHR 10
DL+DYL+R
Sbjct: 136 DLIDYLNR 143


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YGDLVDYLHR 10
Y DLV+ +H+
Sbjct: 740 YNDLVEEIHK 749


>sp|SPH1_HALSI|SMC-LIKE protein Sph1|Halobacterium salinarum (Halobacterium halobium)

Query: 3 DLVDYLHR 10
DL+D LHR
Sbjct: 278 DLLDDLHR 285


>sp|SPH1_HALSA|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 700922

Query: 3 DLVDYLHR 10
DL+D LHR
Sbjct: 278 DLLDDLHR 285


>sp|SPH1_HALS3|SMC-LIKE protein Sph1|Halobacterium salinarum (strain ATCC 29341

Query: 3 DLVDYLHR 10
DL+D LHR
Sbjct: 278 DLLDDLHR 285


>sp|COFG_METMJ|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 YGDLVDYLH 9
Y D++DY++
Sbjct: 82 YADILDYVY 90


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 GDLVDYLHR 10
DLVDY+ R
Sbjct: 752 NDLVDYVER 760


>sp|BIOW_METRM|6-CARBOXYHEXANOATE--COA ligase|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 3 DLVDYLHR 10
DL+DYL +
Sbjct: 243 DLIDYLEK 250


>sp|DHYS_THEON|PROBABLE deoxyhypusine synthase|Thermococcus onnurineus (strain NA1)

Query: 3 DLVDYLHR 10
+++DY HR
Sbjct: 33 EVIDYYHR 40


>sp|COFG_METTH|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 YGDLVDYLH 9
+GD+ DY +
Sbjct: 77 FGDMTDYTY 85


>sp|GGGPS_CALMQ|GERANYLGERANYLGLYCERYL phosphate synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 DLVDYLHR 10
D+VD +HR
Sbjct: 240 DIVDAVHR 247


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YGDLVDYLHR 10
Y D+VDY+ +
Sbjct: 289 YPDVVDYVSK 298


>sp|RS3_STAMF|SMALL ribosomal subunit protein uS3|Staphylothermus marinus (strain ATCC

Query: 2 GDLVDYL 8
GD+VDY+
Sbjct: 158 GDMVDYV 164


>sp|Y267_ARCFU|UNCHARACTERIZED protein AF_0267|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLVDYLH 9
+L+DYLH
Sbjct: 380 ELIDYLH 386


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 DLVDYLHR 10
++++Y+HR
Sbjct: 239 EIIEYMHR 246


>sp|Y614_PYRHO|UNCHARACTERIZED protein PH0614|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DLVDYL 8
DL+DYL
Sbjct: 37 DLIDYL 42


>sp|Y1435_PYRAB|UNCHARACTERIZED protein PYRAB14350|Pyrococcus abyssi (strain GE5 /

Query: 3 DLVDYL 8
DL+DYL
Sbjct: 37 DLIDYL 42


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DLVDYLHR 10
DL+D+L R
Sbjct: 559 DLIDFLRR 566


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DLVDYLHR 10
D+VD +HR
Sbjct: 457 DVVDVVHR 464


>sp|NDK_METTH|NUCLEOSIDE diphosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 YGDLVDYL 8
+ DLVDY+
Sbjct: 58 FRDLVDYI 65


>sp|MSMS_METAC|METHYL sulfide methyltransferase-associated sensor|Methanosarcina

Query: 1 YGDLVDY 7
YG+++DY
Sbjct: 796 YGEIMDY 802


>sp|CSX1_METJA|CRISPR system endoribonuclease Csx1|Methanocaldococcus jannaschii (strain

Query: 1 YGDLVDY 7
YG+L DY
Sbjct: 108 YGNLTDY 114


>sp|PYRDA_AERPE|PUTATIVE dihydroorotate dehydrogenase A (fumarate)|Aeropyrum pernix (strain

Query: 3 DLVDYLHR 10
D+V Y HR
Sbjct: 298 DIVGYAHR 305


>sp|RLME_METJA|RIBOSOMAL RNA large subunit methyltransferase|Methanocaldococcus jannaschii

Query: 1 YGDLVD 6
YGD++D
Sbjct: 166 YGDMID 171


>sp|ARCH_METKA|PROTEIN archease|Methanopyrus kandleri (strain AV19 /

Query: 2 GDLVDYLH 9
GDLV+ LH
Sbjct: 55 GDLVELLH 62


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DLVDYLHR 10
DL+DY+++
Sbjct: 349 DLIDYINK 356


>sp|Y778_AERPE|PUTATIVE HTH-type transcriptional regulatory protein|Aeropyrum pernix

Query: 2 GDLVDYLHR 10
G+ DYL+R
Sbjct: 7 GEFEDYLYR 15


>sp|Y491_METJA|UNCHARACTERIZED protein MJ0491|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YGDLVDYL 8
YG + DYL
Sbjct: 68 YGSIKDYL 75


>sp|OGG1_METTH|PROBABLE N-glycosylase/DNA lyase|Methanothermobacter thermautotrophicus

Query: 1 YGDLVDYLH 9
YG++ DY+
Sbjct: 283 YGEMADYVQ 291


>sp|DNLI2_THEPD|DNA ligase 2|Thermofilum pendens (strain DSM 2475

Query: 1 YGDLVDYLHR 10
Y D+V+Y+ R
Sbjct: 294 YPDVVEYVKR 303


>sp|RPA_METJA|REPLICATION factor A|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDLVDYLH 9
GD+V+ LH
Sbjct: 460 GDIVEILH 467


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 1 YGDLVDY 7
+GDLVD+
Sbjct: 398 FGDLVDF 404


>sp|DNLI_STAMF|DNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 YGDLVDYLHR 10
Y D+VDY +
Sbjct: 293 YPDVVDYARK 302




139|Sequence|691|700|DYLHRNKHTF

>sp|PYRE_STAMF|OROTATE phosphoribosyltransferase|Staphylothermus marinus (strain ATCC

Query: 1 DYLHRNKHT 9
+YL+R KH+
Sbjct: 195 NYLNREKHS 203


>sp|PELO_METM7|PROTEIN pelota homolog|Methanococcus maripaludis (strain C7 /

Query: 1 DYLHRNKHT 9
+YL RN+ T
Sbjct: 297 EYLRRNRRT 305


>sp|PELO_METM6|PROTEIN pelota homolog|Methanococcus maripaludis (strain C6 /

Query: 1 DYLHRNKHT 9
+YL RN+ T
Sbjct: 297 EYLRRNRRT 305


>sp|RSMA_META3|PROBABLE ribosomal RNA small subunit|Methanococcus aeolicus (strain ATCC

Query: 2 YLHRNKHT 9
+ HRNK+T
Sbjct: 203 FQHRNKNT 210




140|Sequence|696|705|NKHTFLQHHS

>sp|Y631_ARCFU|UNCHARACTERIZED protein AF_0631|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NKHTFLQHHS 10
N H+F+ H S
Sbjct: 68 NSHSFVSHQS 77


>sp|FENR_PICTO|FERREDOXIN--NADP reductase|Picrophilus torridus (strain ATCC 700027

Query: 2 KHTFLQHHS 10
+H ++ HHS
Sbjct: 174 RHVYIIHHS 182


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 4 TFLQHH 9
TFL HH
Sbjct: 200 TFLDHH 205




141|Sequence|701|710|LQHHSDKRRP

>sp|METXA_METPE|HOMOSERINE O-acetyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 HHSDKRRP 10
HH D+ RP
Sbjct: 64 HHGDESRP 71


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LQHHSDKR 8
++HHSD R
Sbjct: 267 VEHHSDGR 274


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 1 LQHHSDKRR 9
+ H+DKRR
Sbjct: 249 MAKHTDKRR 257




142|Sequence|706|715|DKRRPPSAEL

>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain

Query: 1 DKRRPPSAE 9
D+R+PP+ E
Sbjct: 2 DQRKPPATE 10


>sp|TOP6B_SULTO|TYPE 2 DNA topoisomerase 6|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DKRRPPSAE 9
D RPPSAE
Sbjct: 303 DDFRPPSAE 311


>sp|RNP4_METB6|RIBONUCLEASE P protein component 4|Methanoregula boonei (strain DSM 21154

Query: 1 DKRRPPSAE 9
DK+RPPS +
Sbjct: 3 DKKRPPSVK 11


>sp|LIPA_HALSA|LIPOYL synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 KRRPPSAE 9
K RPPS E
Sbjct: 11 KMRPPSGE 18


>sp|LIPA_HALS3|LIPOYL synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 KRRPPSAE 9
K RPPS E
Sbjct: 11 KMRPPSGE 18


>sp|VAPB3_PYRAE|PUTATIVE antitoxin VapB3|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 PPSAEL 10
PPSAEL
Sbjct: 62 PPSAEL 67


>sp|PYRC_METKA|DIHYDROOROTASE kandleri (strain AV19 /

Query: 2 KRRPPSAE 9
K RPP AE
Sbjct: 200 KNRPPEAE 207


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 DKRRPPSAEL 10
+ RPP AEL
Sbjct: 168 EGERPPIAEL 177




143|Sequence|711|720|PSAELYSNAL

>sp|UPP_PYRAE|URACIL phosphoribosyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PSAELYSNAL 10
PSAE+Y+ A+
Sbjct: 178 PSAEIYAVAV 187


>sp|RIBA_THEVO|GTP cyclohydrolase-2|Thermoplasma volcanium (strain ATCC 51530

Query: 4 ELYSNA 9
ELYSNA
Sbjct: 3 ELYSNA 8


>sp|RS4E_SACS2|SMALL ribosomal subunit protein eS4|Saccharolobus solfataricus (strain

Query: 1 PSAELYSNAL 10
PSA+LY L
Sbjct: 88 PSADLYFRVL 97


>sp|TOP1_AERPE|DNA topoisomerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 PSAELYSNA 9
P A LY NA
Sbjct: 93 PGASLYVNA 101




144|Sequence|716|725|YSNALPVGLP

>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 1 YSNALPVGL 9
YSN LPVGL
Sbjct: 472 YSNGLPVGL 480


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 YSNALPVGLP 10
Y NA+ VGLP
Sbjct: 93 YRNAINVGLP 102


>sp|HACB_METTH|METHANOGEN homoaconitase small subunit|Methanothermobacter thermautotrophicus

Query: 1 YSNALPVGLP 10
Y NA+ +GLP
Sbjct: 94 YRNAINIGLP 103


>sp|LEUD_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 YSNALPVGLP 10
Y NA+ VGLP
Sbjct: 94 YRNAINVGLP 103


>sp|LEUD1_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 1 YSNALPVGLP 10
Y NA+ +GLP
Sbjct: 92 YRNAINIGLP 101


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YSNALPVGLP 10
Y NA+ +GLP
Sbjct: 92 YRNAINIGLP 101


>sp|Y007_METJA|PUTATIVE dehydratase subunit MJ0007|Methanocaldococcus jannaschii (strain

Query: 2 SNALPVGL 9
+NA+PVGL
Sbjct: 47 ANAIPVGL 54


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YSNALPVGLP 10
Y NA+ +G+P
Sbjct: 92 YRNAINIGIP 101


>sp|HACB1_METAC|METHANOGEN homoaconitase small subunit 1|Methanosarcina acetivorans (strain

Query: 1 YSNALPVGLP 10
+ NA+ VGLP
Sbjct: 95 FRNAINVGLP 104


>sp|LEUD_THEKO|3-ISOPROPYLMALATE dehydratase small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 YSNALPVGLP 10
Y NA+ +GLP
Sbjct: 92 YRNAVNLGLP 101


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 1 YSNALPVGLP 10
Y NA+ +GLP
Sbjct: 94 YRNAINLGLP 103


>sp|LEUD_PYRCJ|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 YSNALPVGLP 10
Y NA+ VGLP
Sbjct: 91 YRNAINVGLP 100


>sp|HMGCS_METMP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 272 YSGAVPLGL 280


>sp|HMGCS_METM5|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C5 /

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 272 YSGAVPLGL 280


>sp|HMGCS_METM6|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C6 /

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 272 YSGAVPLGL 280


>sp|HMGCS_METM7|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus maripaludis (strain C7 /

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 272 YSGAVPLGL 280


>sp|LEUD_METTH|3-ISOPROPYLMALATE dehydratase small subunit|Methanothermobacter thermautotrophicus

Query: 1 YSNALPVGLP 10
Y NA+ VG+P
Sbjct: 90 YRNAINVGIP 99


>sp|HMGCS_METVS|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 272 YSGAVPLGL 280


>sp|HACB_METMA|METHANOGEN homoaconitase small subunit|Methanosarcina mazei (strain ATCC

Query: 1 YSNALPVGLP 10
+ NA+ +GLP
Sbjct: 95 FRNAINIGLP 104


>sp|HACB2_METAC|METHANOGEN homoaconitase small subunit 2|Methanosarcina acetivorans (strain

Query: 1 YSNALPVGLP 10
+ NA+ +GLP
Sbjct: 94 FRNAINIGLP 103


>sp|LEUD_PYRAE|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 YSNALPVGLP 10
+ NA+ VGLP
Sbjct: 91 FRNAINVGLP 100


>sp|HMGCS_METTL|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermococcus thermolithotrophicus

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 272 YSGAVPLGL 280


>sp|HMGCS_METJA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YSNALPVGL 9
YS A+P+GL
Sbjct: 268 YSGAVPLGL 276


>sp|HMGCS_METTH|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YSNALPVGL 9
YS A PVGL
Sbjct: 268 YSGATPVGL 276


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 YSNALPVGLP 10
Y NA+ +G+P
Sbjct: 92 YRNAVNLGIP 101


>sp|TRPA_PYRAB|TRYPTOPHAN synthase alpha chain|Pyrococcus abyssi (strain GE5 /

Query: 1 YSNALPVGLP 10
YS A+ +G+P
Sbjct: 31 YSGAIELGIP 40


>sp|DHYS_PICTO|PROBABLE deoxyhypusine synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 YSNALPVGLP 10
Y N +PV +P
Sbjct: 180 YKNRIPVFIP 189


>sp|LEUD_PYRNV|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 YSNALPVGLP 10
+ NA+ VGLP
Sbjct: 91 FRNAINVGLP 100


>sp|Y1640_METAR|UPF0597 protein UNCMA_16400|Methanocella arvoryzae (strain DSM 22066

Query: 1 YSNALPVGLP 10
Y N + VG+P
Sbjct: 56 YKNGINVGVP 65


>sp|LEUD2_METKA|3-ISOPROPYLMALATE dehydratase small subunit 2|Methanopyrus kandleri (strain AV19 /

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINRGLP 101


>sp|HMGCS_METST|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 YSNALPVGL 9
YS A P+GL
Sbjct: 268 YSGATPLGL 276


>sp|GATA_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 YSNALPVGL 9
+++ LPVGL
Sbjct: 434 FTDGLPVGL 442


>sp|HACB_METJA|METHANOGEN homoaconitase small subunit|Methanocaldococcus jannaschii (strain

Query: 1 YSNALPVGL 9
Y NA+ VGL
Sbjct: 92 YRNAINVGL 100


>sp|ASSY_THEVO|ARGININOSUCCINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 YSNALPVGL 9
+SN LPV +
Sbjct: 215 FSNGLPVAI 223


>sp|LEUD_PYRIL|3-ISOPROPYLMALATE dehydratase small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 YSNALPVGLP 10
+ NA+ +GLP
Sbjct: 91 FRNAINIGLP 100


>sp|LEUD_SACI1|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101


>sp|GATA_METBU|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanococcoides burtonii (strain DSM

Query: 2 SNALPVGL 9
S+ LPVGL
Sbjct: 434 SDGLPVGL 441


>sp|PUR7_HALSA|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 1 YSNALPVG 8
+ NA+PVG
Sbjct: 129 FRNAVPVG 136


>sp|PTH_AERPE|PEPTIDYL-TRNA hydrolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YSNALPVGLP 10
YS A+ GLP
Sbjct: 75 YSKAVEEGLP 84


>sp|WTPB_PYRAB|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus abyssi (strain GE5 /

Query: 1 YSNALPVGLP 10
+S +LP+ LP
Sbjct: 166 FSISLPIALP 175


>sp|LEUD_SACS2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101


>sp|LEUD_SACI7|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101


>sp|LEUD_SACI3|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.27)

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101


>sp|LEUD_SACI2|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101


>sp|LEUD_SACI6|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101


>sp|LEUD_SACI4|3-ISOPROPYLMALATE dehydratase small subunit|Saccharolobus islandicus (strain M.14.25

Query: 1 YSNALPVGLP 10
Y NA+ GLP
Sbjct: 92 YRNAINNGLP 101




145|Sequence|721|730|PVGLPLPSHV

>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PVGLPLPSHV 10
P GL LP H+
Sbjct: 472 PTGLTLPEHI 481


>sp|FOLD_HALWD|BIFUNCTIONAL protein FolD|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VGLPLPSHV 10
V +PLP HV
Sbjct: 111 VQMPLPDHV 119


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PVGLPLPSHV 10
P+GL L +HV
Sbjct: 159 PIGLILLTHV 168


>sp|Y535_METJA|UNCHARACTERIZED protein MJ0535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VGLPLPSH 9
+ LP P+H
Sbjct: 212 INLPFPAH 219


>sp|UPPS_SACS2|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Saccharolobus

Query: 5 PLPSHV 10
PLP HV
Sbjct: 30 PLPDHV 35


>sp|ASSY_METST|ARGININOSUCCINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GLPLPS 8
G+PLPS
Sbjct: 160 GIPLPS 165


>sp|RPO1C_METMA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanosarcina mazei (strain ATCC

Query: 4 LPLPSHV 10
LPLPS++
Sbjct: 16 LPLPSNI 22


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GLPLPSHV 10
GLPLP +
Sbjct: 594 GLPLPKDI 601


>sp|HISX_PYRFU|HISTIDINOL dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVGLPLPS 8
P G PLPS
Sbjct: 101 PGGKPLPS 108


>sp|ASSY_METTH|ARGININOSUCCINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 GLPLPS 8
G+PLPS
Sbjct: 165 GIPLPS 170


>sp|PSS_METJA|CDP-DIACYLGLYCEROL--SERINE O-phosphatidyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 VGLPLPS 8
+GLP+P+
Sbjct: 114 IGLPIPA 120


>sp|HISX_THEKO|HISTIDINOL dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PVGLPLPS 8
P G PLPS
Sbjct: 102 PGGKPLPS 109


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 3 GLPLPSHV 10
G P PSHV
Sbjct: 1071 GSPAPSHV 1078


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 4 LPLPSH 9
LP+PSH
Sbjct: 57 LPIPSH 62


>sp|FOLD1_HALMA|BIFUNCTIONAL protein FolD 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 VGLPLPSHV 10
V +P+P HV
Sbjct: 95 VQMPVPDHV 103


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 4 LPLPSHV 10
LPLP H+
Sbjct: 103 LPLPKHL 109


>sp|MDH_NITMS|MALATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 GLPLPS 8
G+PLPS
Sbjct: 188 GIPLPS 193


>sp|PYRB_METPE|ASPARTATE carbamoyltransferase catalytic subunit|Methanosphaerula palustris

Query: 1 PVGLPLPS 8
P GL LPS
Sbjct: 181 PAGLNLPS 188


>sp|FOLD2_HALMA|BIFUNCTIONAL protein FolD 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 VGLPLPSHV 10
V +P+P HV
Sbjct: 95 VQMPVPDHV 103




146|Sequence|726|735|LPSHVSLTGE

>sp|Y817_ARCFU|UNCHARACTERIZED protein AF_0817|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PSHVSLTGE 10
PS++S+TGE
Sbjct: 148 PSNLSITGE 156


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 1 LPSHVSLTG 9
LP+HV++ G
Sbjct: 127 LPAHVAIEG 135


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC 29341

Query: 1 LPSHVSLTG 9
LP+HV++ G
Sbjct: 127 LPAHVAIEG 135


>sp|Y871_METJA|UNCHARACTERIZED protein MJ0871|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LPSHVSLTG 9
LP HVSL G
Sbjct: 280 LPLHVSLFG 288


>sp|PCNA_METTP|DNA polymerase sliding clamp|Methanothrix thermoacetophila (strain DSM

Query: 1 LPSHVSLTG 9
LP+HV++ G
Sbjct: 127 LPAHVAIPG 135


>sp|AROC_META3|CHORISMATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 PSHVSLTGE 10
PS++ LTGE
Sbjct: 29 PSNLPLTGE 37


>sp|Y582_METMA|UNCHARACTERIZED glycosyltransferase MM_0582|Methanosarcina mazei (strain ATCC

Query: 1 LPSHVSLTGE 10
+PS + L GE
Sbjct: 54 IPSEIKLAGE 63


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 2 PSHVSLTG 9
P HV +TG
Sbjct: 57 PDHVEITG 64


>sp|RS30_SACS2|SMALL ribosomal subunit protein eS30|Saccharolobus solfataricus

Query: 1 LPSHVSLT 8
+PSH SLT
Sbjct: 1 MPSHGSLT 8


>sp|EF2_PYRCJ|ELONGATION factor 2|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 PSHVSLTG 9
P HV TG
Sbjct: 100 PGHVDFTG 107


>sp|EF2_PYRAR|ELONGATION factor 2|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 PSHVSLTG 9
P HV TG
Sbjct: 100 PGHVDFTG 107


>sp|EF2_PYRNV|ELONGATION factor 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 PSHVSLTG 9
P HV TG
Sbjct: 100 PGHVDFTG 107


>sp|EF2_PYRAE|ELONGATION factor 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PSHVSLTG 9
P HV TG
Sbjct: 100 PGHVDFTG 107


>sp|EF2_PYRIL|ELONGATION factor 2|Pyrobaculum islandicum (strain DSM 4184

Query: 2 PSHVSLTG 9
P HV TG
Sbjct: 100 PGHVDFTG 107


>sp|PDXS_METS5|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Metallosphaera sedula (strain

Query: 1 LPSHVSLTGE 10
+P VSLTG+
Sbjct: 34 VPELVSLTGQ 43


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PSHVSLTGE 10
PS +S+TG
Sbjct: 486 PSEISITGS 494


>sp|RTCA_THESM|RNA 3'-terminal phosphate cyclase|Thermococcus sibiricus (strain DSM

Query: 1 LPSHVSL 7
LPSHV++
Sbjct: 197 LPSHVAI 203




147|Sequence|731|740|SLTGESDGGY

>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 1 SLTGESDG 8
S+TGE DG
Sbjct: 31 SITGEKDG 38


>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 2 LTGESDGGY 10
T ESDG Y
Sbjct: 231 FTMESDGSY 239


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 2 LTGESDGGY 10
T ESDG Y
Sbjct: 231 FTMESDGSY 239


>sp|COFE_HALMA|COENZYME F420:L-glutamate ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 LTGESDGG 9
+TGE DGG
Sbjct: 209 VTGEGDGG 216


>sp|DNAG_PYRNV|DNA primase DnaG|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 LTGESDGGY 10
LTGE D Y
Sbjct: 343 LTGEGDSFY 351


>sp|KAE1_PYRIL|TRNA N6-adenosine threonylcarbamoyltransferase|Pyrobaculum islandicum

Query: 2 LTGESDGGY 10
+TG SDG Y
Sbjct: 137 ITGYSDGRY 145


>sp|ASSY_METAC|ARGININOSUCCINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SLTGESDGGY 10
+L GE GGY
Sbjct: 226 ALDGEKLGGY 235




148|Sequence|736|745|SDGGYMDMSK

>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GGYMDM 8
GGYMD+
Sbjct: 4 GGYMDL 9


>sp|FLPA_AERPE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Aeropyrum pernix (strain ATCC

Query: 2 DGGYMDMS 9
DGGYM M+
Sbjct: 174 DGGYMLMA 181


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DGGYMDM 8
DGGY D+
Sbjct: 163 DGGYFDV 169


>sp|FTRL_METTM|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase-like protein|Methanothermobacter marburgensis

Query: 4 GYMDMSK 10
GYMDM K
Sbjct: 114 GYMDMMK 120


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SDGGYMDMSK 10
+DG Y D SK
Sbjct: 138 ADGVYFDTSK 147


>sp|Y844_ARCFU|UNCHARACTERIZED protein AF_0844|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SDGGYMDMSK 10
SDG Y D +K
Sbjct: 115 SDGKYEDAAK 124


>sp|RADA_METMP|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DGGYMDMSK 10
+GGY+D K
Sbjct: 21 EGGYLDFMK 29


>sp|RADA_METMI|DNA repair and recombination protein|Methanococcus maripaludis

Query: 2 DGGYMDMSK 10
+GGY+D K
Sbjct: 21 EGGYLDFMK 29




149|Sequence|741|750|MDMSKDESVD

>sp|PSB1_NITMS|PROTEASOME subunit beta 1|Nitrosopumilus maritimus (strain SCM1)

Query: 2 DMSKDESVD 10
+M+KDE++D
Sbjct: 152 NMTKDEAID 160




150|Sequence|746|755|DESVDYVPML

>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 3 SVDYVPML 10
S+DY+PM+
Sbjct: 516 SIDYIPMI 523


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 SVDYVPML 10
SVDYVP L
Sbjct: 81 SVDYVPKL 88


>sp|GSA_METST|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DESVDYVP 8
DE+V+Y+P
Sbjct: 11 DEAVNYLP 18


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DESVDYV 7
DE VDYV
Sbjct: 353 DEEVDYV 359


>sp|Y1001_ARCFU|UNCHARACTERIZED protein AF_1001|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ESVDYVPML 10
E+VDY P L
Sbjct: 172 ETVDYNPSL 180


>sp|PYRK_PYRAB|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Pyrococcus abyssi

Query: 1 DESVDYVP 8
DE +D++P
Sbjct: 23 DEKLDFIP 30


>sp|KATG_NATPD|CATALASE-PEROXIDASE pharaonis (strain ATCC 35678

Query: 1 DESVDYVP 8
DESVD+ P
Sbjct: 164 DESVDWGP 171


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 DESVDYV 7
DE+VDY+
Sbjct: 53 DEAVDYI 59


>sp|DPOL2_AERPE|DNA polymerase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 DESVDYV 7
DE+VDYV
Sbjct: 670 DEAVDYV 676


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 DESVDYVPM 9
DE ++ VPM
Sbjct: 242 DEGINVVPM 250


>sp|URE1_SULTO|UREASE subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 ESVDYVPM 9
ES+DY P+
Sbjct: 183 ESLDYFPL 190


>sp|AGAL_SACS2|ALPHA-GALACTOSIDASE solfataricus (strain ATCC 35092

Query: 3 SVDYVP 8
S+DYVP
Sbjct: 423 SIDYVP 428


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 3 SVDYVP 8
S+DYVP
Sbjct: 1006 SIDYVP 1011


>sp|COFD_HALSA|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DESVDYVPM 9
D SVD VPM
Sbjct: 154 DLSVDLVPM 162


>sp|COFD_HALS3|2-PHOSPHO-L-LACTATE transferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DESVDYVPM 9
D SVD VPM
Sbjct: 154 DLSVDLVPM 162


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DESVDYVP 8
DE +DY P
Sbjct: 362 DEGLDYEP 369




151|Sequence|751|760|YVPMLDMKGD

>sp|ENO_HALSA|ENOLASE salinarum (strain ATCC 700922

Query: 1 YVPMLDMKGD 10
Y P+LD +G+
Sbjct: 9 YRPILDSRGN 18


>sp|ENO_HALS3|ENOLASE salinarum (strain ATCC 29341

Query: 1 YVPMLDMKGD 10
Y P+LD +G+
Sbjct: 9 YRPILDSRGN 18


>sp|COPA_ARCFU|PROBABLE copper-exporting P-type ATPase|Archaeoglobus fulgidus (strain ATCC

Query: 2 VPMLDMKGD 10
VP+L KGD
Sbjct: 280 VPVLKSKGD 288


>sp|AATB_METAR|A-TYPE ATP synthase subunit B|Methanocella arvoryzae (strain DSM 22066

Query: 2 VPMLDMKGD 10
VP+L M GD
Sbjct: 299 VPILTMPGD 307


>sp|AATB_METBA|A-TYPE ATP synthase subunit B|Methanosarcina barkeri

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 300 IPILSMPGD 308


>sp|AATB_METMA|A-TYPE ATP synthase subunit B|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 300 IPILSMPGD 308


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PMLDMKGD 10
P+LD++GD
Sbjct: 266 PVLDVRGD 273


>sp|AATB_METBF|A-TYPE ATP synthase subunit B|Methanosarcina barkeri (strain Fusaro /

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 300 IPILSMPGD 308


>sp|AATB_METAC|A-TYPE ATP synthase subunit B|Methanosarcina acetivorans (strain ATCC

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 300 IPILSMPGD 308


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 302 IPILTMPGD 310


>sp|CBID_META3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 MLDMKGD 10
++DMKGD
Sbjct: 364 IIDMKGD 370


>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 302 IPILTMPGD 310


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 302 IPILTMPGD 310


>sp|AATB_METPE|A-TYPE ATP synthase subunit B|Methanosphaerula palustris (strain ATCC

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 299 IPILTMPGD 307


>sp|AATB_METMJ|A-TYPE ATP synthase subunit B|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 299 IPILTMPGD 307


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 307 IPILTMPGD 315


>sp|AATB_METB6|A-TYPE ATP synthase subunit B|Methanoregula boonei (strain DSM 21154

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 299 IPILTMPGD 307


>sp|AATB_HALWD|A-TYPE ATP synthase subunit B|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 308 IPILTMPGD 316


>sp|AATB_HALVD|A-TYPE ATP synthase subunit B|Haloferax volcanii (strain ATCC 29605

Query: 2 VPMLDMKGD 10
+P+L M GD
Sbjct: 304 IPILTMPGD 312




152|Sequence|756|765|DMKGDVKYAD

>sp|NNR_KORCO|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Korarchaeum cryptofilum (strain

Query: 1 DMKGDVKYAD 10
D+KG V++AD
Sbjct: 110 DIKGAVEWAD 119


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DMKGDVK 7
DM+GDVK
Sbjct: 179 DMEGDVK 185


>sp|SERB_HALS3|PHOSPHOSERINE phosphatase|Halobacterium salinarum (strain ATCC 29341

Query: 2 MKGDVKYAD 10
M+G++ YAD
Sbjct: 39 MRGELSYAD 47


>sp|ADH_THEBA|ALCOHOL dehydrogenase|Thermococcus barophilus

Query: 3 KGDVKY 8
KGD+KY
Sbjct: 157 KGDIKY 162


>sp|ASPGP_PYRHO|PLANT-TYPE L-asparaginase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MKGDVKY 8
MKG++KY
Sbjct: 151 MKGEIKY 157


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 1 DMKGDVKYAD 10
+MK D KY D
Sbjct: 160 NMKQDAKYMD 169


>sp|ARGC_METS3|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DMKGDVKYAD 10
D+ GD +Y D
Sbjct: 94 DLSGDYRYRD 103


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 2 MKGDVKYAD 10
+KGD+K D
Sbjct: 419 LKGDIKSGD 427


>sp|DCDB_METB6|DCTP deaminase, dUMP-forming|Methanoregula boonei (strain DSM 21154

Query: 1 DMKGDVKYAD 10
D K D KY D
Sbjct: 160 DKKADAKYLD 169


>sp|METAA_METII|HOMOSERINE O-acetyltransferase|Methanomassiliicoccus intestinalis (strain

Query: 1 DMKGDVK 7
D+KGD+K
Sbjct: 201 DLKGDLK 207


>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 DMKGDVKY 8
D+ GD+KY
Sbjct: 241 DINGDLKY 248


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 2 MKGDVKYA 9
MKGD+K A
Sbjct: 207 MKGDLKEA 214


>sp|PYRC_METAC|DIHYDROOROTASE acetivorans (strain ATCC 35395

Query: 2 MKGDVKY 8
+KGDV Y
Sbjct: 194 LKGDVSY 200


>sp|Y1039_PYRHO|UNCHARACTERIZED ABC transporter extracellular-binding protein|Pyrococcus horikoshii

Query: 2 MKGDVKYAD 10
+KG+VK+ D
Sbjct: 231 IKGEVKWED 239


>sp|CFBD_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 3 KGDVKY 8
+GDVKY
Sbjct: 179 RGDVKY 184


>sp|TRPC_PYRAB|INDOLE-3-GLYCEROL phosphate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DMKGDVKYAD 10
D+K +KYAD
Sbjct: 193 DLKVALKYAD 202




153|Sequence|761|770|VKYADIESSN

>sp|Y856_METTH|METALLOPROTEASE MTH_856|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VKYADIESSN 10
V Y D+ESS+
Sbjct: 140 VSYVDMESSS 149


>sp|ENDA_HALMA|TRNA-SPLICING endonuclease|Haloarcula marismortui (strain ATCC 43049

Query: 3 YADIESS 9
YAD+ES+
Sbjct: 269 YADVESA 275


>sp|DTDA_SULTO|D-AMINOACYL-TRNA deacylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KYADIESSN 10
KY DIE N
Sbjct: 148 KYKDIECEN 156


>sp|Y1409_METJA|UNCHARACTERIZED protein MJ1409|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KYADIESSN 10
KY DI+S N
Sbjct: 252 KYGDIDSLN 260


>sp|Y2399_ARCFU|UNCHARACTERIZED tRNA/rRNA methyltransferase AF_2399|Archaeoglobus fulgidus

Query: 1 VKYADIE 7
+KYAD E
Sbjct: 60 IKYADFE 66




154|Sequence|766|775|IESSNYMAPY

>sp|GCH3_METST|GTP cyclohydrolase III|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IESSNYMAP 9
I NYMAP
Sbjct: 181 IGGDNYMAP 189


>sp|TRM1_SULTO|TRNA (guanine(26)-N(2))-dimethyltransferase|Sulfurisphaera tokodaii

Query: 1 IESSNYMAPY 10
+E S Y++PY
Sbjct: 312 VEESKYVSPY 321


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 5 NYMAPY 10
NY+APY
Sbjct: 76 NYIAPY 81


>sp|AGLB1_ARCFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IESSNYMAPY 10
+E NY+ PY
Sbjct: 446 LEEQNYLNPY 455




155|Sequence|771|780|YMAPYDNYVP

>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YMAPYDNYV 9
Y P+DNY+
Sbjct: 48 YTTPWDNYL 56


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YMAPYDNYV 9
Y P+DNY+
Sbjct: 48 YTTPWDNYL 56


>sp|Y706_METBF|UPF0288 protein Mbar_A0706|Methanosarcina barkeri (strain Fusaro /

Query: 3 APYDNYVP 10
APY+N+ P
Sbjct: 257 APYENFEP 264


>sp|Y175_METJA|UNCHARACTERIZED protein MJ0175|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YMAPYDNYVP 10
YM +DN +P
Sbjct: 106 YMIKFDNKIP 115


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 YMAPYDNYV 9
Y PYDN +
Sbjct: 137 YTHPYDNQI 145


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 MAPYDNYVP 10
+APYD+ VP
Sbjct: 155 VAPYDSDVP 163


>sp|IXTPA_IGNH4|DITP/XTP pyrophosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YMAPYDNYV 9
+ PY NYV
Sbjct: 80 FPGPYSNYV 88


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 1 YMAPYDNYV 9
Y+APYD V
Sbjct: 77 YIAPYDATV 85


>sp|AROB_PYRAE|3-DEHYDROQUINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PYDNYV 9
PYD YV
Sbjct: 22 PYDKYV 27


>sp|CAS8B_HALVD|CRISPR-ASSOCIATED protein Cas8b|Haloferax volcanii (strain ATCC 29605

Query: 3 APYDNY 8
APYDN+
Sbjct: 428 APYDNW 433


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YMAPYDNYV 9
Y+APY Y+
Sbjct: 21 YVAPYPRYI 29


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 PYDNYV 9
PYD YV
Sbjct: 1335 PYDGYV 1340


>sp|MAP2_PYRFU|METHIONINE aminopeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 PYDNYV 9
P+DNYV
Sbjct: 172 PHDNYV 177


>sp|MAP2_PYRHO|METHIONINE aminopeptidase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 PYDNYV 9
P+DNYV
Sbjct: 172 PHDNYV 177


>sp|APE1_SULTO|PROBABLE aminopeptidase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YMAPYD-NYV 9
Y+APYD NY+
Sbjct: 88 YVAPYDGNYL 97


>sp|APE1_SACS2|PROBABLE aminopeptidase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YMAPYD 6
Y+APYD
Sbjct: 88 YVAPYD 93


>sp|RRP4_SACS2|EXOSOME complex component Rrp4|Saccharolobus solfataricus (strain ATCC

Query: 3 APYDNYVP 10
APY Y+P
Sbjct: 94 APYKAYLP 101


>sp|IXTPA_THEAC|DITP/XTP pyrophosphatase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 YMAPYDNYV 9
+ PY NYV
Sbjct: 75 FPGPYSNYV 83


>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 5 YDNYVP 10
YD Y+P
Sbjct: 31 YDKYIP 36


>sp|Y1954_ARCFU|PUTATIVE amidase AF_1954|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 YDNYVP 10
Y+NYVP
Sbjct: 84 YENYVP 89


>sp|SYM_AERPE|METHIONINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 4 PYDNYVP 10
PY N+VP
Sbjct: 11 PYVNHVP 17


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MAPYDNY 8
M+ YDNY
Sbjct: 93 MSKYDNY 99


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 YDNYV 9
YDNYV
Sbjct: 170 YDNYV 174




156|Sequence|776|785|DNYVPSAPER

>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 DNYVPSAPE 9
DNYVP E
Sbjct: 274 DNYVPETIE 282


>sp|MPGS_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DNYVPSA 7
DNY+P A
Sbjct: 170 DNYIPGA 176


>sp|MPGS_PYRHO|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DNYVPSA 7
DNY+P A
Sbjct: 170 DNYIPGA 176


>sp|GFPS_METMA|GERANYLFARNESYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 VPSAPER 10
+PSAPE+
Sbjct: 102 LPSAPEK 108


>sp|GCSPA_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 DNYVPSAPE 9
D+Y P PE
Sbjct: 86 DSYTPYQPE 94


>sp|GCSPA_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 1 DNYVPSAPE 9
D+Y P PE
Sbjct: 86 DSYTPYQPE 94


>sp|PELO_PYRNV|PROTEIN pelota homolog|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DNYVPSAPER 10
D+Y+ +PE+
Sbjct: 281 DSYIKESPEK 290


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DNYVPSAPE 9
D YV S+PE
Sbjct: 134 DYYVTSSPE 142


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DNYVPSAPE 9
D YV S+PE
Sbjct: 134 DYYVTSSPE 142


>sp|MPGS_AERPE|MANNOSYL-3-PHOSPHOGLYCERATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DNYVPSA 7
DNYVP +
Sbjct: 169 DNYVPGS 175


>sp|MALA_HALJT|ALPHA-AMYLASE MalA|Haloarcula japonica (strain ATCC 49778

Query: 1 DNYVPSAPER 10
+++VP AP R
Sbjct: 50 EHFVPDAPGR 59


>sp|CUTA_SULAC|GLYCERALDEHYDE dehydrogenase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DNYVPSAPE 9
D YVP+A E
Sbjct: 674 DYYVPTAVE 682




157|Sequence|781|790|SAPERTCRAT

>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 PERTC 7
PERTC
Sbjct: 215 PERTC 219


>sp|DADD_METB6|5'-DEOXYADENOSINE deaminase|Methanoregula boonei (strain DSM 21154

Query: 4 ERTCRAT 10
ER CRAT
Sbjct: 165 ERECRAT 171


>sp|RS17_PICTO|SMALL ribosomal subunit protein uS17|Picrophilus torridus (strain ATCC

Query: 3 PERTC 7
PERTC
Sbjct: 11 PERTC 15


>sp|RS17_SULAC|SMALL ribosomal subunit protein uS17|Sulfolobus acidocaldarius (strain

Query: 1 SAPERTC 7
SAP +TC
Sbjct: 17 SAPSKTC 23




158|Sequence|786|795|TCRATLINES

>sp|KHSE_META3|HOMOSERINE kinase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 CRATLIN 8
CRATLI+
Sbjct: 241 CRATLID 247


>sp|TPIS_METJA|TRIOSEPHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CRATLINES 10
C+ TLIN S
Sbjct: 83 CKGTLINHS 91


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 1 TCRATLINES 10
T RATL+N S
Sbjct: 7176 TGRATLVNTS 7185


>sp|G1PDH_METMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TCRATL 6
TCRAT+
Sbjct: 74 TCRATM 79


>sp|G1PDH_METAC|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanosarcina acetivorans (strain ATCC

Query: 1 TCRATL 6
TCRAT+
Sbjct: 74 TCRATM 79




159|Sequence|791|800|LINESPVLSY

>sp|CBPX2_SACS2|THERMOSTABLE carboxypeptidase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 INESPVLSY 10
I+E+P LSY
Sbjct: 25 IHENPELSY 33


>sp|LEUD_METS5|3-ISOPROPYLMALATE dehydratase small subunit|Metallosphaera sedula (strain ATCC

Query: 1 LINESPVLSY 10
+I E PVL Y
Sbjct: 1 MIVEGPVLKY 10


>sp|AATC_THEAC|A-TYPE ATP synthase subunit C|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NESPVLSY 10
+E+PVL+Y
Sbjct: 205 DEAPVLNY 212


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LINESPVLSY 10
+I ESP+L Y
Sbjct: 252 VICESPMLEY 261


>sp|Y345_METJA|UNCHARACTERIZED protein MJ0345|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NESPVLS 9
NE+P+LS
Sbjct: 76 NETPILS 82




160|Sequence|796|805|PVLSYMDLVG

>sp|HEM2_METTH|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermobacter thermautotrophicus (strain

Query: 1 PVLSYMDLVG 10
P L+Y+D++G
Sbjct: 254 PALAYLDVIG 263


>sp|HDRB2_METAC|FERREDOXIN/F(420)H(2)-DEPENDENT CoB-CoM heterodisulfide reductase subunit|Methanosarcina

Query: 1 PVLSYMDLVG 10
PVL Y L+G
Sbjct: 257 PVLHYSQLLG 266


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PVLSYMDLV 9
PV +Y D+V
Sbjct: 277 PVFTYFDIV 285


>sp|HDRB_METMA|FERREDOXIN:COB-COM heterodisulfide reductase subunit B|Methanosarcina mazei (strain

Query: 1 PVLSYMDLVG 10
PVL Y L+G
Sbjct: 257 PVLHYSQLLG 266


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 1 PVLSYMDLVG 10
P++++MD+ G
Sbjct: 289 PIMAHMDVAG 298


>sp|HEM2_ARCFU|DELTA-AMINOLEVULINIC acid dehydratase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PVLSYMDLV 9
P L Y+D++
Sbjct: 249 PALPYLDII 257


>sp|HEM2_METJA|DELTA-AMINOLEVULINIC acid dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PVLSYMDLV 9
P L Y+D++
Sbjct: 258 PALPYLDII 266


>sp|FLA1_THEVO|FLAGELLIN B1|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PVLSYMDLV 9
PV+SY D V
Sbjct: 190 PVISYEDQV 198


>sp|AATI_THEAC|A-TYPE ATP synthase subunit I|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VLSYMDLVG 10
+LSY+ LVG
Sbjct: 535 ILSYLRLVG 543


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 VLSYMDLV 9
V+ YMDL+
Sbjct: 366 VVGYMDLI 373


>sp|HEM2_METSC|DELTA-AMINOLEVULINIC acid dehydratase|Methanothermus sociabilis

Query: 1 PVLSYMDLV 9
P L Y+D++
Sbjct: 248 PALPYLDII 256




161|Sequence|801|810|MDLVGFSYQV

>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 3 LVGFSYQV 10
LVGFSY V
Sbjct: 169 LVGFSYYV 176


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LVGFSY 8
LVGFSY
Sbjct: 171 LVGFSY 176


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 DLVGFSY 8
DL+G+SY
Sbjct: 287 DLIGWSY 293


>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 MDLVGFS 7
+DL+GFS
Sbjct: 69 IDLIGFS 75




162|Sequence|806|815|FSYQVANGME

>sp|QUEC_METBU|7-CYANO-7-DEAZAGUANINE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FSYQVANGME 10
FSY ANG++
Sbjct: 155 FSYSTANGVK 164


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 FSYQVANGME 10
FS++V GME
Sbjct: 356 FSWRVPPGME 365


>sp|Y2656_METAC|UPF0228 protein MA_2656|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SYQVANGME 10
+YQ+AN +E
Sbjct: 176 AYQIANELE 184


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 SYQVANG 8
+YQ+ANG
Sbjct: 375 AYQIANG 381


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YQVANGME 10
YQVA+G++
Sbjct: 99 YQVASGLD 106


>sp|MFND_METFA|TYRAMINE--L-GLUTAMATE ligase|Methanocaldococcus fervens (strain DSM 4213

Query: 1 FSYQVANGME 10
F Y +A+G E
Sbjct: 5 FEYAIASGFE 14


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 FSYQVANGM 9
++Y+V NG+
Sbjct: 518 YNYEVGNGL 526


>sp|QUEC_METMA|7-CYANO-7-DEAZAGUANINE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FSYQVANGME 10
FSY NG++
Sbjct: 156 FSYSTQNGVK 165




163|Sequence|811|820|ANGMEFLASK

>sp|SFSA_SACI2|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 NGMEFLA 8
NG EFLA
Sbjct: 49 NGKEFLA 55


>sp|NUCS2_HALSA|ENDONUCLEASE NucS 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 NGMEFLA 8
NG+EF+A
Sbjct: 225 NGLEFVA 231


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 NGMEFLA 8
NG EFLA
Sbjct: 49 NGKEFLA 55


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 NGMEFLA 8
NG EFLA
Sbjct: 49 NGKEFLA 55


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 NGMEFLA 8
NG EFLA
Sbjct: 49 NGKEFLA 55




164|Sequence|816|825|FLASKNCVHR

>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FLASKNCVH 9
FLAS+ C++
Sbjct: 146 FLASRGCIN 154




165|Sequence|821|830|NCVHRDLAAR

>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 1 NCVHRDLAAR 10
NC + DLA R
Sbjct: 175 NCTNLDLAPR 184


>sp|TRM1_METST|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaera stadtmanae

Query: 1 NCVHRD 6
NC+HR+
Sbjct: 247 NCLHRE 252


>sp|SYE_IGNH4|GLUTAMATE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 CVHRDL 7
C HRDL
Sbjct: 211 CPHRDL 216


>sp|Y1020_METJA|UNCHARACTERIZED protein MJ1020|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NCVHRDL 7
N VHRD+
Sbjct: 104 NSVHRDI 110




166|Sequence|826|835|DLAARNVLIC

>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus (strain

Query: 3 AARNVLIC 10
+ RNV+IC
Sbjct: 142 SGRNVIIC 149


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DLAARNVLIC 10
D+ +NVL C
Sbjct: 436 DIMTKNVLTC 445


>sp|GLMS_PYRAE|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrobaculum aerophilum (strain ATCC

Query: 2 LAARNVLI 9
LAARNV I
Sbjct: 289 LAARNVYI 296




167|Sequence|831|840|NVLICEGKLV

>sp|ABLB_METMP|BETA-LYSINE N(6)-acetyltransferase|Methanococcus maripaludis (strain DSM

Query: 1 NVLICEGKL 9
N ICEGKL
Sbjct: 64 NGYICEGKL 72


>sp|DADD_METHJ|5'-DEOXYADENOSINE deaminase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 NVLICEGKLV 10
+ +IC+GK++
Sbjct: 409 DTVICQGKIL 418


>sp|PURT_METAR|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocella arvoryzae

Query: 3 LICEGKLV 10
+ CEGK++
Sbjct: 328 IACEGKVI 335




168|Sequence|836|845|EGKLVKICDF

>sp|RPO2C_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanothermobacter

Query: 2 GKLVKICD 9
GKL+ CD
Sbjct: 10 GKLIGTCD 17


>sp|GGGPS_PYRHO|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GKLVKICD 9
GKL ++C+
Sbjct: 38 GKLARVCE 45


>sp|GGGPS_PYRFU|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GKLVKICD 9
GKL ++C+
Sbjct: 35 GKLARVCE 42


>sp|MER_METJA|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGKLVKI 7
EGK+VKI
Sbjct: 133 EGKVVKI 139


>sp|PUS10_NITMS|TRNA pseudouridine synthase Pus10|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EGKLVKICDF 10
GK +ICDF
Sbjct: 182 SGKGCRICDF 191


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 EGKLVKICDF 10
+GKL+KI D
Sbjct: 470 DGKLIKIKDL 479


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 EGKLVKI 7
EGK++KI
Sbjct: 4 EGKIIKI 10


>sp|GGGPS_METBU|GERANYLGERANYLGLYCERYL phosphate synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EGKLVKIC 8
+GK KIC
Sbjct: 207 DGKTAKIC 214




169|Sequence|841|850|KICDFGLARD

>sp|CARB_METMJ|CARBAMOYL phosphate synthase large chain|Methanoculleus marisnigri (strain

Query: 1 KICDFGLAR 9
+IC+ GLAR
Sbjct: 188 RICELGLAR 196


>sp|ARGJ_METKA|GLUTAMATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 KICDFGLAR 9
++CD G+AR
Sbjct: 49 EVCDRGVAR 57


>sp|TRPD_PYRFU|ANTHRANILATE phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DFGLAR 9
DFGLAR
Sbjct: 242 DFGLAR 247


>sp|PUR2_PYRFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 DFGLARD 10
D+GLAR+
Sbjct: 44 DYGLARE 50


>sp|PGMMM_THEKO|PHOSPHOGLUCOMUTASE/PHOSPHOMANNOMUTASE kodakarensis (strain ATCC BAA-918

Query: 4 DFGLARD 10
DFG+A+D
Sbjct: 237 DFGVAQD 243


>sp|MTXH_METMA|PUTATIVE methyltransferase mtx subunit H|Methanosarcina mazei (strain ATCC

Query: 1 KICDFG 6
KICD G
Sbjct: 249 KICDIG 254


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 4 DFGLARD 10
DFG+A D
Sbjct: 223 DFGIAHD 229


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 1 KICDFGLA 8
KIC G+A
Sbjct: 154 KICSIGIA 161


>sp|PNCB_THEAC|PUTATIVE nicotinate phosphoribosyltransferase|Thermoplasma acidophilum

Query: 1 KICDFGL 7
+ CDFG+
Sbjct: 98 RYCDFGM 104


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 1 KICDFG 6
++CDFG
Sbjct: 160 ELCDFG 165




170|Sequence|846|855|GLARDIMRDS

>sp|SYI_AERPE|ISOLEUCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GLARDIMR 8
GLARDI+R
Sbjct: 977 GLARDIVR 984


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GLARDIMR 8
GLAR+I+R
Sbjct: 946 GLAREIVR 953


>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 3 ARDIMRDS 10
AR+++RDS
Sbjct: 414 AREVLRDS 421


>sp|RFCS_METST|REPLICATION factor C small subunit|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 ARDIMRD 9
ARD++RD
Sbjct: 243 ARDLLRD 249


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LARDIMRDS 10
+A++IM+DS
Sbjct: 365 MAQEIMKDS 373




171|Sequence|851|860|IMRDSNYISK

>sp|Y237_THEAC|MEMO1 family protein Ta0237|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IMRDSNYISK 10
+ RDSNYI K
Sbjct: 108 LYRDSNYIVK 117


>sp|FAU1_PYRAE|PROBABLE ribonuclease FAU-1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IMRDSNYI 8
I RD+NY+
Sbjct: 351 IPRDANYV 358


>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 DSNYIS 9
DSNY+S
Sbjct: 196 DSNYVS 201


>sp|PYRC_METST|DIHYDROOROTASE stadtmanae (strain ATCC 43021

Query: 2 MRDSNY 7
+RDSNY
Sbjct: 277 LRDSNY 282


>sp|HIS8_METS3|HISTIDINOL-PHOSPHATE aminotransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MRDSNYIS 9
+RD NYI
Sbjct: 265 LRDKNYIE 272


>sp|RS8_THEAC|SMALL ribosomal subunit protein uS8|Thermoplasma acidophilum (strain

Query: 1 IMRDSNYI 8
+M+D NYI
Sbjct: 39 VMQDYNYI 46


>sp|RS8_THEVO|SMALL ribosomal subunit protein uS8|Thermoplasma volcanium (strain ATCC

Query: 1 IMRDSNYI 8
+M+D NYI
Sbjct: 39 VMQDYNYI 46




172|Sequence|856|865|NYISKGSTFL

>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 1 NYISKG 6
NYISKG
Sbjct: 14 NYISKG 19


>sp|RS8E_STAMF|SMALL ribosomal subunit protein eS8|Staphylothermus marinus (strain ATCC

Query: 1 NYISKGS 7
NYI+KG+
Sbjct: 94 NYITKGT 100


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 ISKGSTFL 10
+S+G TFL
Sbjct: 184 VSRGGTFL 191


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 ISKGSTFL 10
+S+G TFL
Sbjct: 184 VSRGGTFL 191


>sp|THIC_PYRFU|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 ISKGSTFL 10
+S+G TFL
Sbjct: 184 VSRGGTFL 191


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 3 ISKGSTFL 10
+S+G TFL
Sbjct: 184 VSRGGTFL 191


>sp|HPRT_METBU|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 NYISKGSTFL 10
N ISKG T L
Sbjct: 109 NGISKGETVL 118


>sp|Y289_METJA|UNCHARACTERIZED protein MJ0289|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YISKGSTFL 10
YI KG FL
Sbjct: 186 YIKKGKIFL 194




173|Sequence|861|870|GSTFLPLKWM

>sp|AROD_METS5|3-DEHYDROQUINATE dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GSTFLPL 7
GSTF+P+
Sbjct: 154 GSTFMPM 160


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 3 TFLPLKW 9
TF PL W
Sbjct: 288 TFTPLDW 294


>sp|CBIM1_METPE|PUTATIVE cobalt transport protein CbiM|Methanosphaerula palustris (strain

Query: 4 FLPLKW 9
FLPL+W
Sbjct: 7 FLPLQW 12




174|Sequence|866|875|PLKWMAPESI

>sp|SYT_HALMA|THREONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 WMAPESI 10
W+APE I
Sbjct: 535 WLAPEQI 541


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LKWMAPESI 10
L+W+ PE I
Sbjct: 397 LRWLNPEHI 405


>sp|Y399_METKA|UPF0201 protein MK0399|Methanopyrus kandleri (strain AV19 /

Query: 2 LKWMAPESI 10
+ W+APE+I
Sbjct: 132 IDWLAPETI 140


>sp|SYT_HALSA|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 WMAPESI 10
W+APE +
Sbjct: 535 WLAPEQV 541


>sp|SYT_HALS3|THREONINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 WMAPESI 10
W+APE +
Sbjct: 535 WLAPEQV 541


>sp|SYT_NATPD|THREONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 WMAPESI 10
W+APE +
Sbjct: 535 WLAPEQV 541


>sp|SYH_HALLT|HISTIDINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 PLKWMA 6
P+KWM+
Sbjct: 96 PIKWMS 101


>sp|Y695_THEPD|UPF0201 protein Tpen_0695|Thermofilum pendens (strain DSM 2475

Query: 2 LKWMAPESI 10
L W+AP ++
Sbjct: 127 LNWLAPRTV 135


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 1 PLKWMAPES 9
PLKW++ S
Sbjct: 91 PLKWLSLSS 99


>sp|NUCS_METTH|ENDONUCLEASE NucS|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 PLKWMAPES 9
P+ W P+S
Sbjct: 74 PVNWQPPKS 82


>sp|Y1346_THEON|UPF0201 protein TON_1346|Thermococcus onnurineus (strain NA1)

Query: 2 LKWMAPES 9
+KW+AP +
Sbjct: 121 MKWLAPRT 128


>sp|Y1010_PYRHO|UPF0201 protein PH1010|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LKWMAPES 9
+KW+AP +
Sbjct: 124 MKWLAPRT 131


>sp|Y1297_PYRFU|UPF0201 protein PF1297|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LKWMAPES 9
+KW+AP +
Sbjct: 126 MKWLAPRT 133


>sp|Y973_PYRAB|UPF0201 protein PYRAB09730|Pyrococcus abyssi (strain GE5 /

Query: 2 LKWMAPES 9
+KW+AP +
Sbjct: 124 MKWLAPRT 131


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 LKWMAP 7
LKW+AP
Sbjct: 167 LKWLAP 172


>sp|Y1335_THEKO|UPF0201 protein TK1335|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LKWMAPES 9
+KW+AP +
Sbjct: 124 MKWLAPRT 131




175|Sequence|871|880|APESIFNSLY

>sp|KTHY_METVS|PROBABLE thymidylate kinase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PESIFNSLY 10
PE +FN L+
Sbjct: 179 PEEVFNELF 187


>sp|PRNK_METJA|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase MJ1315|Methanocaldococcus jannaschii (strain

Query: 2 PESIFNSLY 10
PE+ FN+LY
Sbjct: 86 PETNFNNLY 94


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 2 PESIFNSLY 10
PE I N+LY
Sbjct: 263 PEEIGNALY 271


>sp|RFCS_METLZ|REPLICATION factor C small subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 APESIFNSLY 10
AP + N LY
Sbjct: 261 APNELLNQLY 270


>sp|Y1016_METJA|UNCHARACTERIZED protein MJ1016|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 ESIFNSLY 10
E +FN LY
Sbjct: 238 EKLFNELY 245


>sp|MOAA_PYRAE|PROBABLE GTP 3',8-cyclase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 SIFNSLY 10
S+FN LY
Sbjct: 196 SVFNELY 202


>sp|SYC_METMA|CYSTEINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 APESIFNSLY 10
APE I S+Y
Sbjct: 188 APEEIERSIY 197




176|Sequence|876|885|FNSLYTTLSD

>sp|MUTS_METMA|DNA mismatch repair protein MutS|Methanosarcina mazei (strain ATCC

Query: 2 NSLYTTLS 9
NSLY TLS
Sbjct: 304 NSLYRTLS 311


>sp|DP2L_METBU|DNA polymerase II large subunit|Methanococcoides burtonii (strain DSM

Query: 2 NSLYTTLSD 10
NS YT L+D
Sbjct: 490 NSQYTALAD 498


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 1 FNSLYTTLSD 10
FN L TL+D
Sbjct: 235 FNQLLETLAD 244


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 2 NSLYTTLS 9
NSLY TL+
Sbjct: 304 NSLYRTLN 311




177|Sequence|881|890|TTLSDVWSFG

>sp|SYG_THEKO|GLYCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 LSDVWSF 9
LSDVW F
Sbjct: 138 LSDVWYF 144


>sp|SYG_THEGJ|GLYCINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LSDVWSF 9
LSDVW F
Sbjct: 138 LSDVWYF 144


>sp|SYG_PYRFU|GLYCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LSDVWSF 9
LSDVW F
Sbjct: 136 LSDVWYF 142


>sp|TRUA_THEKO|TRNA pseudouridine synthase A|Thermococcus kodakarensis (strain ATCC

Query: 3 LSDVWSFG 10
LSDVW G
Sbjct: 85 LSDVWVLG 92


>sp|RS5_AERPE|SMALL ribosomal subunit protein uS5|Aeropyrum pernix (strain ATCC 700893

Query: 3 LSDVWSF 9
+SDVW+F
Sbjct: 174 ISDVWTF 180


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii (strain

Query: 1 TTLSDVWS 8
TTL++VW+
Sbjct: 97 TTLTEVWA 104


>sp|TOP6A_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 SDVWSFG 10
SDVW +G
Sbjct: 55 SDVWVYG 61


>sp|TOP6A_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 4 SDVWSFG 10
SDVW +G
Sbjct: 55 SDVWVYG 61


>sp|TOP6A_METAC|TYPE 2 DNA topoisomerase 6|Methanosarcina acetivorans (strain ATCC

Query: 4 SDVWSFG 10
SDVW +G
Sbjct: 59 SDVWVYG 65


>sp|TRUA_PYRFU|TRNA pseudouridine synthase A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TTLSDVWSFG 10
+ +SDVW +G
Sbjct: 78 SRMSDVWIWG 87


>sp|ARSS_METTH|ARCHAETIDYLSERINE synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 TLSDVWSFG 10
+LSDV SFG
Sbjct: 75 SLSDVISFG 83


>sp|SYG_THESM|GLYCINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 3 LSDVWSF 9
L+DVW F
Sbjct: 138 LADVWYF 144


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 TLSDVW 7
TL+DVW
Sbjct: 785 TLADVW 790


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 TLSDVW 7
TL+DVW
Sbjct: 785 TLADVW 790


>sp|PSS_METJA|CDP-DIACYLGLYCEROL--SERINE O-phosphatidyltransferase|Methanocaldococcus jannaschii (strain

Query: 2 TLSDVWSFG 10
++SDV SFG
Sbjct: 63 SISDVVSFG 71


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TLSDVW 7
TL+DVW
Sbjct: 785 TLADVW 790


>sp|RHMD_CALMQ|PUTATIVE L-rhamnonate dehydratase|Caldivirga maquilingensis (strain ATCC

Query: 5 DVWSFG 10
D WSFG
Sbjct: 254 DYWSFG 259


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain ATCC

Query: 1 TTLSDVW 7
TTL +VW
Sbjct: 153 TTLEEVW 159


>sp|LEUD_PYRHO|3-ISOPROPYLMALATE dehydratase small subunit|Pyrococcus horikoshii (strain ATCC

Query: 2 TLSDVWSFG 10
T VW FG
Sbjct: 3 TTGKVWKFG 11


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 TTLSDVWSFG 10
TTL+D+ S+G
Sbjct: 315 TTLNDLQSWG 324


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 TLSDVW 7
TL+D+W
Sbjct: 785 TLADIW 790




178|Sequence|886|895|VWSFGILLWE

>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 2 WSFGILLW 9
W +GI LW
Sbjct: 205 WEWGITLW 212


>sp|FUMC_SACS2|FUMARATE hydratase class II|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VWSFGIL 7
+WS G+L
Sbjct: 23 IWSMGVL 29


>sp|ARDF_PYRFU|ARCHAEAL ribosome dimerization factor|Pyrococcus furiosus (strain ATCC

Query: 1 VWSFGIL 7
+W+FG+L
Sbjct: 86 LWNFGLL 92


>sp|HICDH_PYRHO|ISOCITRATE/HOMOISOCITRATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 WSFGILLWE 10
W+ GI+L E
Sbjct: 205 WNLGIILSE 213


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 VWSFGILLWE 10
VW ++LW+
Sbjct: 368 VWGAELILWD 377


>sp|Y1114_METJA|UNCHARACTERIZED protein MJ1114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VWSFGILLW 9
+W FGIL++
Sbjct: 32 IWVFGILVF 40


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 WSFGIL 7
W FGIL
Sbjct: 162 WQFGIL 167


>sp|Y491_METJA|UNCHARACTERIZED protein MJ0491|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WSFGILLWE 10
++FG+ +W+
Sbjct: 20 YNFGVSMWK 28


>sp|DMSC_HALSA|PUTATIVE dimethyl sulfoxide reductase membrane|Halobacterium salinarum

Query: 1 VWSFGILL 8
VW FGI++
Sbjct: 135 VWDFGIVM 142




179|Sequence|891|900|ILLWEIFTLG

>sp|AGLS_HALVD|DOLICHOL phosphate-mannose mannosyltransferase|Haloferax volcanii (strain

Query: 1 ILLWEIFTLG 10
+L+W++ TLG
Sbjct: 346 MLIWQVVTLG 355


>sp|RL6_ARCFU|LARGE ribosomal subunit protein uL6|Archaeoglobus fulgidus (strain ATCC

Query: 4 WEIFTL 9
WE+F+L
Sbjct: 7 WEVFSL 12


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 3 LWEIFTLG 10
WE++T G
Sbjct: 137 FWEVYTHG 144


>sp|HDG_METAC|HYPOXANTHINE DNA glycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ILLWEIFTLG 10
I LW++F G
Sbjct: 70 IGLWDVFKAG 79


>sp|HDG_METBF|HYPOXANTHINE DNA glycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ILLWEIFTLG 10
I LW++F G
Sbjct: 70 IGLWDVFKAG 79


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 3 LWEIFTLG 10
WE++T G
Sbjct: 137 FWEVYTHG 144


>sp|HIS6_THEON|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus onnurineus (strain

Query: 4 WEIFTLG 10
WE++T G
Sbjct: 138 WEVYTHG 144


>sp|HIS6_THEGJ|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus gammatolerans

Query: 3 LWEIFTLG 10
WE++T G
Sbjct: 137 FWEVYTHG 144


>sp|SYL_METTP|LEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LLWEIFT 8
L+W+++T
Sbjct: 99 LIWDVYT 105




180|Sequence|896|905|IFTLGGTPYP

>sp|FLAH_SULAC|ARCHAEAL flagellar ATP-binding protein FlaH|Sulfolobus acidocaldarius

Query: 4 LGGTPYP 10
LGG PYP
Sbjct: 14 LGGIPYP 20


>sp|Y946_ARCFU|UNCHARACTERIZED protein AF_0946|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFTLGGTPYP 10
+FT+G TP P
Sbjct: 652 VFTVGDTPVP 661


>sp|SEPS_METMJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 IFTLGGTPYP 10
+F LGG P P
Sbjct: 94 VFYLGGLPRP 103


>sp|RL10E_PICTO|LARGE ribosomal subunit protein uL16|Picrophilus torridus (strain ATCC

Query: 4 LGGTPYP 10
+GG PYP
Sbjct: 23 MGGVPYP 29


>sp|SEPS_METPE|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 IFTLGGTPYP 10
+F LGG P P
Sbjct: 94 VFYLGGLPRP 103


>sp|RL10E_THEVO|LARGE ribosomal subunit protein uL16|Thermoplasma volcanium (strain

Query: 4 LGGTPYP 10
+GG PYP
Sbjct: 23 MGGVPYP 29


>sp|CDAT8_METKA|TRNA(CYTOSINE(8)) deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 IFTLGGTPY 9
+ T GG PY
Sbjct: 123 LLTFGGNPY 131


>sp|SEPS_METHJ|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 IFTLGGTPYP 10
+F LGG P P
Sbjct: 94 VFYLGGLPRP 103


>sp|SEPS_METTH|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 FTLGGTPYP 10
F LGG P P
Sbjct: 93 FYLGGLPRP 101


>sp|RL10E_THEAC|LARGE ribosomal subunit protein uL16|Thermoplasma acidophilum (strain

Query: 4 LGGTPYP 10
+GG PYP
Sbjct: 23 MGGVPYP 29


>sp|ATGT_THEAC|TRNA-GUANINE(15) transglycosylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IFTLGGTPYP 10
+FT GTP P
Sbjct: 122 VFTTPGTPKP 131


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 FTLGGT 7
FTLGGT
Sbjct: 170 FTLGGT 175


>sp|CARB_ARCFU|CARBAMOYL phosphate synthase large chain|Archaeoglobus fulgidus (strain ATCC

Query: 2 FTLGGT 7
FTLGGT
Sbjct: 172 FTLGGT 177


>sp|CARB1_METJA|CARBAMOYL phosphate synthase large chain,|Methanocaldococcus jannaschii

Query: 2 FTLGGT 7
FTLGGT
Sbjct: 169 FTLGGT 174


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 IFTLGGTPY 9
+ ++G TPY
Sbjct: 462 VISMGATPY 470


>sp|NEP1_METJA|RIBOSOMAL RNA small subunit methyltransferase|Methanocaldococcus jannaschii

Query: 2 FTLGGTPY 9
F +GG PY
Sbjct: 159 FIIGGFPY 166


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 IFTLGGTPYP 10
+F +GG P P
Sbjct: 94 VFYIGGLPRP 103


>sp|CARB_METTH|CARBAMOYL phosphate synthase large chain|Methanothermobacter

Query: 2 FTLGGT 7
FTLGGT
Sbjct: 170 FTLGGT 175


>sp|PGK_SACS2|PHOSPHOGLYCERATE kinase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 IFTLGG 6
IFTLGG
Sbjct: 199 IFTLGG 204


>sp|SYTC_AERPE|THREONINE--TRNA ligase catalytic subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 IFTLGGTP 8
+F+LGG P
Sbjct: 43 LFSLGGGP 50


>sp|COBD_AERPE|PROBABLE cobalamin biosynthesis protein CobD|Aeropyrum pernix (strain ATCC

Query: 5 GGTPYP 10
GG PYP
Sbjct: 281 GGAPYP 286


>sp|TRMY_PYRAE|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrobaculum aerophilum

Query: 3 TLGGTPY 9
+LG TPY
Sbjct: 115 SLGSTPY 121


>sp|OTC_METST|ORNITHINE carbamoyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IFTLGGTP 8
I LGGTP
Sbjct: 58 IHQLGGTP 65


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain ATCC

Query: 3 TLGGTPYP 10
T+G PYP
Sbjct: 187 TMGPHPYP 194


>sp|MER_ARCFU|5,10-METHYLENETETRAHYDROMETHANOPTERIN reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IFTLGGTP 8
IF++ GTP
Sbjct: 281 IFSISGTP 288


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 3 TLGGTPYP 10
T+G PYP
Sbjct: 189 TMGPHPYP 196


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 1 IFTLGGTPYP 10
+ +GGT YP
Sbjct: 177 VICVGGTHYP 186




181|Sequence|901|910|GTPYPELPMN

>sp|SYP_AERPE|PROLINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTPYPELPM 9
GTP+PE P+
Sbjct: 454 GTPWPEEPV 462


>sp|SYP_METKA|PROLINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 GTPYPE 6
GTPYPE
Sbjct: 455 GTPYPE 460


>sp|PRIS_NITMS|DNA primase small subunit PriS|Nitrosopumilus maritimus (strain SCM1)

Query: 4 YPELPMN 10
+P LPMN
Sbjct: 77 FPNLPMN 83


>sp|RRP42_THEGJ|EXOSOME complex component Rrp42|Thermococcus gammatolerans (strain DSM

Query: 1 GTPYPELP 8
G P+P+LP
Sbjct: 68 GEPFPDLP 75


>sp|SYH_NANEQ|HISTIDINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 GTPYPE 6
G+PYPE
Sbjct: 128 GSPYPE 133


>sp|RRP42_THEKO|EXOSOME complex component Rrp42|Thermococcus kodakarensis (strain ATCC

Query: 1 GTPYPELP 8
G P+P+LP
Sbjct: 68 GEPFPDLP 75


>sp|SYI_SULTO|ISOLEUCINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 GTPYPELPM 9
G PYP P+
Sbjct: 43 GPPYPSSPI 51


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GTPYPELPM 9
G PYP P+
Sbjct: 43 GPPYPSSPI 51


>sp|SYH_KORCO|HISTIDINE--TRNA ligase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 GTPYPE 6
G+PYPE
Sbjct: 129 GSPYPE 134


>sp|RRP42_THEON|EXOSOME complex component Rrp42|Thermococcus onnurineus (strain NA1)

Query: 1 GTPYPELP 8
G P+P+LP
Sbjct: 68 GEPFPDLP 75


>sp|PRIS_CENSY|DNA primase small subunit PriS|Cenarchaeum symbiosum (strain A)

Query: 4 YPELPMN 10
+PELPM+
Sbjct: 77 FPELPMS 83


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 YPELPMN 10
YPE+P N
Sbjct: 88 YPEIPTN 94


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GTPYPELP 8
G PYP P
Sbjct: 46 GPPYPSSP 53


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GTPYPELP 8
G PYP P
Sbjct: 46 GPPYPSSP 53


>sp|RRP42_METKA|EXOSOME complex component Rrp42|Methanopyrus kandleri (strain AV19 /

Query: 1 GTPYPELP 8
G PYP+ P
Sbjct: 67 GRPYPDSP 74


>sp|PYRH_PYRNV|URIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 GTPYPELPMN 10
G YP++P N
Sbjct: 79 GDAYPKVPTN 88


>sp|RRP42_ARCFU|EXOSOME complex component Rrp42|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GTPYPELP 8
G PYP+ P
Sbjct: 67 GEPYPDTP 74


>sp|Y942_METJA|PROBABLE ATP-dependent helicase MJ0942|Methanocaldococcus jannaschii (strain

Query: 5 PELPMN 10
PELP+N
Sbjct: 214 PELPIN 219


>sp|HMGCS_SACI7|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|HMGCS_SACI2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|HMGCS_SACI1|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 4 YPELPMN 10
YP+LP N
Sbjct: 92 YPDLPKN 98


>sp|HMGCS_SACS2|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|SYH_AERPE|HISTIDINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTPYPE 6
G+PYPE
Sbjct: 133 GSPYPE 138


>sp|HEM3_METMA|PROBABLE porphobilinogen deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTPYPELP 8
GTP ELP
Sbjct: 107 GTPLDELP 114


>sp|PYRH_METMA|URIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YPELPMN 10
YPE+P N
Sbjct: 88 YPEIPSN 94


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 PELPMN 10
P+LPMN
Sbjct: 297 PDLPMN 302


>sp|GATB_NATPD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Natronomonas pharaonis (strain ATCC

Query: 4 YPELPMN 10
YP+LP N
Sbjct: 93 YPDLPKN 99


>sp|HMGCS_SACI6|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|HMGCS_SACI4|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|HMGCS_SACI3|HYDROXYMETHYLGLUTARYL-COA synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GTPYP 5
GTPYP
Sbjct: 193 GTPYP 197


>sp|SYK_HALSA|LYSINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 GTPYPELP 8
G PY E+P
Sbjct: 114 GAPYTEIP 121


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM

Query: 4 YPELPMN 10
YP+LP N
Sbjct: 92 YPDLPKN 98


>sp|SYP_PYRFU|PROLINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTPYPE 6
G PYPE
Sbjct: 447 GIPYPE 452


>sp|SYL_IGNH4|LEUCINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 PYPELPMN 10
PYP PM+
Sbjct: 47 PYPNSPMH 54


>sp|SYT_METBF|THREONINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTPYPELPMN 10
G PY +LP++
Sbjct: 616 GKPYRKLPLS 625


Query: 2 TPYPEL 7
TPYP+L
Sbjct: 191 TPYPKL 196


>sp|SYP_PYRAB|PROLINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 GTPYPE 6
G PYPE
Sbjct: 447 GIPYPE 452


>sp|Y347_METJA|UNCHARACTERIZED protein MJ0347|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TPYPELPMN 10
T Y E+P+N
Sbjct: 79 TSYQEIPVN 87


>sp|SYP_PYRHO|PROLINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTPYPE 6
G PYPE
Sbjct: 447 GIPYPE 452


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 4 YPELP 8
YPELP
Sbjct: 141 YPELP 145


>sp|SYP_THEKO|PROLINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTPYPE 6
G PYPE
Sbjct: 448 GIPYPE 453


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 GTPYPELPMN 10
G P+P LP++
Sbjct: 484 GQPHPGLPVD 493


>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GTPYPE 6
G PYPE
Sbjct: 190 GIPYPE 195


>sp|AATC_DESSY|A-TYPE ATP synthase subunit C|Desulfurococcus sp. (strain SY)

Query: 1 GTPYPEL 7
GTPY E+
Sbjct: 173 GTPYEEV 179


>sp|RRP42_PYRAE|EXOSOME complex component Rrp42|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GTPYPELP 8
G P+P+ P
Sbjct: 73 GQPFPDAP 80


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 GTPYPEL 7
G PYP+L
Sbjct: 181 GDPYPDL 187


>sp|HMGCS_METBU|HYDROXYMETHYLGLUTARYL-COA synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GTPYPE 6
G PYPE
Sbjct: 193 GMPYPE 198


>sp|SEPS_METBU|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GTPYPELP 8
G YP+LP
Sbjct: 347 GMTYPQLP 354


>sp|SYT_METAC|THREONINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTPYPELPM 9
G PY +LP+
Sbjct: 616 GKPYRKLPL 624


Query: 2 TPYPEL 7
TPYP+L
Sbjct: 191 TPYPKL 196


>sp|RRP42_METAR|EXOSOME complex component Rrp42|Methanocella arvoryzae (strain DSM 22066

Query: 1 GTPYPELP 8
G P+P+ P
Sbjct: 67 GEPFPDTP 74


>sp|IORA_METTH|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter thermautotrophicus

Query: 1 GTPYPELPMN 10
G P+P LP++
Sbjct: 484 GQPHPGLPVD 493


>sp|HMGCS_METAC|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GTPYPE 6
G PYPE
Sbjct: 193 GMPYPE 198


>sp|SYT_METMA|THREONINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTPYPELPM 9
G PY +LP+
Sbjct: 615 GKPYRKLPL 623


Query: 2 TPYPEL 7
TPYP+L
Sbjct: 190 TPYPKL 195


>sp|RL24_METVS|LARGE ribosomal subunit protein uL24|Methanococcus vannielii (strain ATCC

Query: 2 TPYPELPMN 10
TPYP P N
Sbjct: 92 TPYPIHPSN 100


>sp|RL24_METVA|LARGE ribosomal subunit protein uL24|Methanococcus vannielii

Query: 2 TPYPELPMN 10
TPYP P N
Sbjct: 92 TPYPIHPSN 100


>sp|HMGCS_METMA|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTPYPE 6
G PYPE
Sbjct: 193 GMPYPE 198


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GTPYPELP 8
G P+P+ P
Sbjct: 70 GEPFPDTP 77


>sp|HMGCS_METBF|HYDROXYMETHYLGLUTARYL-COA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GTPYPE 6
G PYPE
Sbjct: 193 GMPYPE 198


>sp|RRP42_METAC|EXOSOME complex component Rrp42|Methanosarcina acetivorans (strain ATCC

Query: 1 GTPYPE 6
GTP+P+
Sbjct: 69 GTPFPD 74


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC

Query: 1 GTPYPELP 8
G P+P+ P
Sbjct: 70 GEPFPDTP 77


>sp|PORB_METTH|PYRUVATE synthase subunit PorB|Methanothermobacter thermautotrophicus

Query: 2 TPYPE 6
TPYPE
Sbjct: 50 TPYPE 54


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 1 GTPYPELPM 9
G P P+LP+
Sbjct: 543 GVPIPDLPI 551


>sp|PORB_METTM|PYRUVATE synthase subunit PorB|Methanothermobacter marburgensis (strain

Query: 2 TPYPE 6
TPYPE
Sbjct: 50 TPYPE 54


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTPYPELPM 9
G P P+LP+
Sbjct: 544 GVPVPDLPV 552


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 2 TPYPE 6
TPYPE
Sbjct: 53 TPYPE 57


>sp|PURL_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 TPYPELP 8
TPY +LP
Sbjct: 162 TPYEKLP 168


>sp|RRP42_METMA|EXOSOME complex component Rrp42|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GTPYPE 6
GTP+P+
Sbjct: 69 GTPFPD 74


>sp|RRP42_PYRFU|EXOSOME complex component Rrp42|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTPYPELP 8
G P+P+ P
Sbjct: 68 GEPFPDTP 75


>sp|APGM_THEGJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermococcus gammatolerans (strain DSM

Query: 4 YPELPM 9
YP++PM
Sbjct: 230 YPDIPM 235




182|Sequence|906|915|ELPMNEQFYN

>sp|QUEE_HALS3|7-CARBOXY-7-DEAZAGUANINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LPMNEQFYN 10
LP+NE FY+
Sbjct: 20 LPINELFYS 28


>sp|ACSA_PYRAE|ACETYL-COENZYME A synthetase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELPMNEQFYN 10
ELP +EQ N
Sbjct: 11 ELPFDEQIIN 20


>sp|XPD_THEAC|ATP-DEPENDENT DNA helicase XPD|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ELPMNEQFYN 10
ELP E+FY+
Sbjct: 129 ELPTAEEFYD 138


>sp|ALDC_METMA|ALPHA-ACETOLACTATE decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ELPMNEQFYN 10
ELP + FYN
Sbjct: 263 ELPASGDFYN 272


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 MNEQFYN 10
MNE+ YN
Sbjct: 182 MNEKMYN 188


>sp|SYT_NITMS|THREONINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LPMNEQFYN 10
+P+ E+FY+
Sbjct: 512 IPLKEEFYD 520


>sp|CAPPA_PYRCJ|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ELPMNEQF 8
ELP+ E+F
Sbjct: 64 ELPLGEKF 71


>sp|RS7_PYRFU|SMALL ribosomal subunit protein uS7|Pyrococcus furiosus (strain ATCC

Query: 3 PMNEQFY 9
P+NE+F+
Sbjct: 4 PLNERFF 10


>sp|SYP_METMP|PROLINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPMNEQFYN 10
+P NE YN
Sbjct: 423 IPFNESIYN 431




183|Sequence|911|920|EQFYNAIKRG

>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EQFYNAIKRG 10
E YNAI+RG
Sbjct: 355 EAGYNAIRRG 364


>sp|GCST_THEON|PROBABLE aminomethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 EQFYNAIKRG 10
E ++NAIKRG
Sbjct: 121 EAWFNAIKRG 130


>sp|GCST_THEGJ|PROBABLE aminomethyltransferase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EQFYNAIKRG 10
E ++NAIKRG
Sbjct: 121 EAWFNAIKRG 130


>sp|EF2_PYRAB|ELONGATION factor 2|Pyrococcus abyssi (strain GE5 /

Query: 1 EQFYNAIKRG 10
++ YNAIK G
Sbjct: 496 DEIYNAIKEG 505


>sp|EF2_PYRHO|ELONGATION factor 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EQFYNAIKRG 10
++ YNAIK G
Sbjct: 496 DEIYNAIKEG 505


>sp|IF6_METB6|TRANSLATION initiation factor 6|Methanoregula boonei (strain DSM 21154

Query: 1 EQFYNAIKRG 10
E+F NAI+ G
Sbjct: 32 EEFRNAIREG 41


>sp|GLMD_THEKO|GLUCOSAMINE-6-PHOSPHATE deaminase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FYNAIKRG 10
+Y AIKRG
Sbjct: 304 YYKAIKRG 311


>sp|AOX2_AERPE|HEME-COPPER oxidase subunit 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 EQFYNAIKRG 10
E+FYNA G
Sbjct: 209 EEFYNAYNSG 218


>sp|Y1595_METJA|UPF0104 membrane protein MJ1595|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EQFYNAIK 8
E+FYN++K
Sbjct: 208 EEFYNSMK 215


>sp|PIMT1_ARCFU|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EQFYNAIKR 9
E+ YNAIK+
Sbjct: 22 EKVYNAIKK 30


>sp|GCST_THEKO|PROBABLE aminomethyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 EQFYNAIKRG 10
+ ++NAIKRG
Sbjct: 121 DAWFNAIKRG 130


>sp|HMD_METM5|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 EQFYNAIKRG 10
E+F AIK+G
Sbjct: 160 EKFVGAIKKG 169


>sp|Y1371_METJA|UNCHARACTERIZED methyltransferase MJ1371|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EQFYNAIK 8
E++YNAIK
Sbjct: 229 ERYYNAIK 236


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 1 EQFYNAIK 8
E FY+AIK
Sbjct: 395 EAFYDAIK 402


>sp|ILVD_AERPE|DIHYDROXY-ACID dehydratase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EQFYNAI 7
E FYNAI
Sbjct: 255 EAFYNAI 261


>sp|XDH1_HALVD|D-XYLOSE 1-dehydrogenase [NADP(+)] 1|Haloferax volcanii (strain ATCC 29605

Query: 3 FYNAIKRG 10
FYN KRG
Sbjct: 288 FYNRQKRG 295


>sp|MRE11_AERPE|DNA double-strand break repair protein|Aeropyrum pernix (strain ATCC

Query: 4 YNAIKRG 10
YNA+ RG
Sbjct: 269 YNAVNRG 275


>sp|KPTA_PYRAB|PROBABLE RNA 2'-phosphotransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 EQFYNAIKR 9
E+F NAI+R
Sbjct: 39 EEFVNAIRR 47


>sp|Y3143_PYRAE|UPF0273 protein PAE3143|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EQF-YNAIKRG 10
+QF YN +KRG
Sbjct: 42 KQFLYNGLKRG 52


>sp|COABC_METJA|COENZYME A biosynthesis bifunctional protein|Methanocaldococcus jannaschii

Query: 1 EQFYNAIKR 9
E +NAIKR
Sbjct: 140 ENMFNAIKR 148


>sp|GMHA_METJA|PROBABLE phosphoheptose isomerase|Methanocaldococcus jannaschii (strain

Query: 1 EQFYNAIKRG 10
E YNA+K G
Sbjct: 30 EVIYNALKNG 39


>sp|SFSA_THEVO|SUGAR fermentation stimulation protein homolog|Thermoplasma volcanium

Query: 1 EQFYNAIKRG 10
++FY A+K G
Sbjct: 177 DEFYKALKNG 186


>sp|RIFK_THEVO|RIBOFLAVIN kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EQFYNAIKR 9
+Q+Y AIK+
Sbjct: 5 DQYYRAIKK 13


>sp|CARB_METS3|CARBAMOYL phosphate synthase large chain|Methanobrevibacter smithii (strain

Query: 2 QFYNAIKRG 10
Q Y+AIK G
Sbjct: 425 QLYSAIKDG 433


>sp|DHE3_AERPE|GLUTAMATE dehydrogenase|Aeropyrum pernix (strain ATCC 700893

Query: 4 YNAIKRG 10
YN +KRG
Sbjct: 160 YNRVKRG 166


>sp|PMDHS_ARCFU|PHOSPHOMEVALONATE dehydratase small subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EQFYNAIKRG 10
E+F+ A+K G
Sbjct: 107 EKFFEAVKTG 116


>sp|RIFK_THEAC|RIBOFLAVIN kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EQFYNAIKR 9
+Q+Y AIK+
Sbjct: 5 DQYYRAIKK 13


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 EQFYNAIKRG 10
E+F+ +KRG
Sbjct: 781 ERFFGRVKRG 790


>sp|SFSA_SACI4|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QFYNAIKRG 10
+F+N+IK G
Sbjct: 203 EFWNSIKEG 211


>sp|SFSA_SACI6|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QFYNAIKRG 10
+F+N+IK G
Sbjct: 203 EFWNSIKEG 211


>sp|SFSA_SACI3|SUGAR fermentation stimulation protein homolog|Saccharolobus islandicus

Query: 2 QFYNAIKRG 10
+F+N+IK G
Sbjct: 203 EFWNSIKEG 211


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 EQFYNAIKRG 10
E+F ++KRG
Sbjct: 408 ERFEESVKRG 417


>sp|EF2_PYRWO|ELONGATION factor 2|Pyrococcus woesei

Query: 1 EQFYNAIKRG 10
++ Y AIK G
Sbjct: 496 DEIYQAIKEG 505


>sp|EF2_PYRFU|ELONGATION factor 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EQFYNAIKRG 10
++ Y AIK G
Sbjct: 496 DEIYQAIKEG 505


>sp|PURP_CALMQ|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Caldivirga maquilingensis (strain ATCC

Query: 2 QFYNAIKRG 10
+ NA+KRG
Sbjct: 322 EIVNAVKRG 330


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 EQFYNAIKRG 10
E F+ A+K G
Sbjct: 842 EDFWEALKEG 851


>sp|Y136_ARCFU|UNCHARACTERIZED protein AF_0136|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EQFYNAIKRG 10
E+F +KRG
Sbjct: 105 EEFLETVKRG 114




184|Sequence|916|925|AIKRGYRMAQ

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 IKRGYRMAQ 10
IKRGYR A+
Sbjct: 596 IKRGYRFAK 604


>sp|KAE1B_METVS|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IKRGYRMAQ 10
IK+GYR A+
Sbjct: 376 IKKGYRTAE 384


>sp|THS_METKA|THERMOSOME subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 IKRGYRMA 9
I RGYRMA
Sbjct: 126 IARGYRMA 133


>sp|THSA_ARCFU|THERMOSOME subunit alpha|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKRGYRMA 9
I RGYRMA
Sbjct: 124 IARGYRMA 131


>sp|NDRZ_THEAC|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Thermoplasma

Query: 2 IKRGYRMAQ 10
I R YRMA+
Sbjct: 696 IARAYRMAK 704


>sp|Y355_METJA|UNCHARACTERIZED protein MJ0355|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AIKRGYR 7
AIK+GYR
Sbjct: 18 AIKKGYR 24


>sp|MUTS1_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 2 IKRGYRMA 9
++RGYR+A
Sbjct: 77 VERGYRVA 84


>sp|COBQ_METAR|PROBABLE cobyric acid synthase|Methanocella arvoryzae (strain DSM 22066

Query: 3 KRGYRMA 9
+RGYR+A
Sbjct: 29 RRGYRVA 35


>sp|SYG_PYRHO|GLYCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AIKRGYRM 8
A+KRGY M
Sbjct: 261 AVKRGYVM 268


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain

Query: 1 AIKRGYRMAQ 10
++KRG MAQ
Sbjct: 43 SLKRGLTMAQ 52


>sp|Y2133_ARCFU|UNCHARACTERIZED protein AF_2133|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IKRGYRMA 9
IK GYR A
Sbjct: 13 IKHGYRAA 20


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IKRGYRMAQ 10
+K+GYR ++
Sbjct: 376 VKKGYRTSE 384


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain

Query: 2 IKRGYRMA 9
IK+GY++A
Sbjct: 79 IKKGYKVA 86


>sp|MUTS1_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 IKRGYRMA 9
++RGYR+A
Sbjct: 73 VERGYRVA 80


>sp|MUTS1_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 2 IKRGYRMA 9
++RGYR+A
Sbjct: 73 VERGYRVA 80


>sp|COBQ_METTH|PROBABLE cobyric acid synthase|Methanothermobacter thermautotrophicus

Query: 3 KRGYRMA 9
+RGYR+A
Sbjct: 30 RRGYRVA 36


>sp|THSB_THEAC|THERMOSOME subunit beta|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IKRGYRMA 9
I GYRMA
Sbjct: 122 ISEGYRMA 129


>sp|KAE1B_METM6|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IKRGYRMAQ 10
+K+GYR+ +
Sbjct: 372 VKKGYRILE 380


>sp|KAE1B_METM5|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 IKRGYRMAQ 10
+K+GYR+ +
Sbjct: 374 VKKGYRILE 382


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AIKRGYRMA 9
A+K G RMA
Sbjct: 56 AVKAGIRMA 64


>sp|SRP54_PYRIL|SIGNAL recognition particle 54 kDa|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IKRGYRMA 9
+KRGYR+
Sbjct: 124 VKRGYRVG 131


>sp|ILVD_METKA|DIHYDROXY-ACID dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 1 AIKRGYRMA 9
A+K G RMA
Sbjct: 56 AVKAGIRMA 64


>sp|DPCKG_THEON|GTP-DEPENDENT dephospho-CoA kinase|Thermococcus onnurineus (strain NA1)

Query: 1 AIKRGYRMAQ 10
AIK+G+ +A+
Sbjct: 102 AIKKGFGLAE 111




185|Sequence|921|930|YRMAQPAHAS

>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 2 RMAQPAHAS 10
+M+QP+HAS
Sbjct: 116 QMSQPSHAS 124


>sp|TRM10_THEKO|TRNA (guanine(9)-/adenine(9)-N1)-methyltransferase|Thermococcus

Query: 1 YRMAQPAHA 9
Y M +P HA
Sbjct: 269 YEMQEPLHA 277




186|Sequence|926|935|PAHASDEIYE

>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AHASDEIYE 10
AH +D+IYE
Sbjct: 237 AHDADDIYE 245


>sp|THIM_METAR|HYDROXYETHYLTHIAZOLE kinase|Methanocella arvoryzae (strain DSM 22066

Query: 2 AHASDEIYE 10
AHA DE+ E
Sbjct: 46 AHAHDEVAE 54


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 PAHASDEIYE 10
P HA+ ++YE
Sbjct: 241 PDHATRDLYE 250


>sp|ARSA_METJA|PUTATIVE arsenical pump-driving ATPase|Methanocaldococcus jannaschii

Query: 1 PAHASDEIYE 10
PAH+ +I+E
Sbjct: 64 PAHSLRDIFE 73


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PAHASDEIYE 10
P + S+E+Y+
Sbjct: 216 PPYTSEELYD 225


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 2 AHASDEI 8
AHA DE+
Sbjct: 535 AHAGDEV 541




187|Sequence|931|940|DEIYEIMQKC

>sp|PPAC_ARCFU|PROBABLE manganese-dependent inorganic pyrophosphatase|Archaeoglobus

Query: 1 DEIYEIMQK 9
DEIYE M+K
Sbjct: 244 DEIYEAMKK 252


>sp|HEM1_THEVO|GLUTAMYL-TRNA reductase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DEIYEIMQK 9
DEIYEI +K
Sbjct: 262 DEIYEISKK 270


>sp|IXTPA_HYPBU|DITP/XTP pyrophosphatase|Hyperthermus butylicus (strain DSM 5456

Query: 1 DEIYEIMQKC 10
+EI E++Q C
Sbjct: 17 EEINEVLQSC 26


>sp|GLMM_METAC|PROBABLE phosphoglucosamine mutase|Methanosarcina acetivorans (strain ATCC

Query: 1 DEIYEIMQK 9
DEIYE+ +K
Sbjct: 419 DEIYEMAEK 427


>sp|Y2180_SACI7|MEMO1 family protein YG5714_2180|Saccharolobus islandicus (strain

Query: 1 DEIYEIMQK 9
D IY +MQK
Sbjct: 175 DAIYNVMQK 183


>sp|PEPQ_PYRFU|XAA-PRO dipeptidase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DEIYEIMQKC 10
DEIYEI++
Sbjct: 76 DEIYEILKNT 85


>sp|Y739_SACI1|MEMO1 family protein YN1551_0739|Saccharolobus islandicus (strain

Query: 1 DEIYEIMQK 9
D IY +MQK
Sbjct: 175 DAIYNVMQK 183


>sp|VPB16_ARCFU|PUTATIVE antitoxin VapB16|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEIYEIMQKC 10
DE+YE +QK
Sbjct: 8 DEVYEKLQKM 17


>sp|LHRC_METJA|ATP-DEPENDENT helicase Lhr-Core|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DEIYEIMQK 9
+EIYEI++K
Sbjct: 14 EEIYEILEK 22


>sp|Y2219_SACI2|MEMO1 family protein LS215_2219|Saccharolobus islandicus (strain L.S.2.15

Query: 1 DEIYEIMQK 9
D IY +MQK
Sbjct: 175 DAIYNVMQK 183


>sp|Y2134_SACI3|MEMO1 family protein M1627_2134|Saccharolobus islandicus (strain M.16.27)

Query: 1 DEIYEIMQK 9
D IY +MQK
Sbjct: 175 DAIYNVMQK 183


>sp|Y2061_SACI6|MEMO1 family protein M164_2061|Saccharolobus islandicus (strain M.16.4 /

Query: 1 DEIYEIMQK 9
D IY +MQK
Sbjct: 175 DAIYNVMQK 183


>sp|Y2054_SACI4|MEMO1 family protein M1425_2054|Saccharolobus islandicus (strain M.14.25

Query: 1 DEIYEIMQK 9
D IY +MQK
Sbjct: 175 DAIYNVMQK 183


>sp|GATD_METST|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosphaera stadtmanae (strain ATCC

Query: 2 EIYEIMQ 8
EIYEIM+
Sbjct: 413 EIYEIMK 419


>sp|THII_METMA|PROBABLE tRNA sulfurtransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EIYEIMQK 9
E YEIM+K
Sbjct: 291 EAYEIMKK 298


>sp|MTIP_METTH|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanothermobacter

Query: 1 DEIYEIMQK 9
DE++EIM +
Sbjct: 212 DEVFEIMDE 220


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 DEIYEIMQK 9
+E+Y++MQK
Sbjct: 180 EELYQLMQK 188


>sp|AATI_ARCFU|A-TYPE ATP synthase subunit I|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEIYEIMQKC 10
DE I+Q+C
Sbjct: 190 DEFLRILQEC 199


>sp|THII_METAC|PROBABLE tRNA sulfurtransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 EIYEIMQK 9
E YE+M+K
Sbjct: 298 EAYEVMKK 305


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 DEIYEIMQKC 10
DE+ M+KC
Sbjct: 241 DEVASFMRKC 250


>sp|ISF3_ARCFU|IRON-SULFUR flavoprotein AF_1896|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DEIYEIMQK 9
D+IY++++K
Sbjct: 61 DDIYKVLEK 69


>sp|ARAD_SACS2|ARABINONATE dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 EIYEIMQK 9
E YEIM+K
Sbjct: 258 EFYEIMRK 265


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 DEIYEIMQ 8
D++YEIM+
Sbjct: 169 DKVYEIMR 176


>sp|Y047_METJA|PROBABLE RNase MJ4|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEIYEIMQKC 10
DE++EI++K
Sbjct: 379 DELHEIIKKV 388


>sp|NPPNK_METJA|BIFUNCTIONAL NADP phosphatase/NAD kinase|Methanocaldococcus jannaschii (strain

Query: 1 DEIYEIMQK 9
DE++EI+ K
Sbjct: 396 DEVFEIIDK 404


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 DEIYEIMQK 9
DE+YE +K
Sbjct: 143 DELYEACEK 151


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 DEIYEIMQK 9
DE+YE +K
Sbjct: 143 DELYEACEK 151


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 DEIYEIMQK 9
DE+YE +K
Sbjct: 143 DELYEACEK 151


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 DEIYEIMQK 9
DE+YE +K
Sbjct: 143 DELYEACEK 151


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEIYEIMQKC 10
DE+YE +++
Sbjct: 117 DEVYETLKRV 126


>sp|Y066_SACS2|MEMO1 family protein SSO0066|Saccharolobus solfataricus (strain ATCC

Query: 1 DEIYEIMQK 9
D IY+++QK
Sbjct: 175 DAIYKVIQK 183


>sp|HIS8_METST|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DEIYEIMQKC 10
DE++E++ K
Sbjct: 95 DELFEVLAKT 104




188|Sequence|936|945|IMQKCWEEKF

>sp|AROC_METST|CHORISMATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 5 CWEEKF 10
CW EKF
Sbjct: 110 CWREKF 115


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 5 CWEEKF 10
CW+E+F
Sbjct: 430 CWQEEF 435


>sp|RFCS_METM6|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C6 /

Query: 2 MQKCWEEKF 10
MQK W EK+
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METM5|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C5 /

Query: 2 MQKCWEEKF 10
MQK W EK+
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METMP|REPLICATION factor C small subunit|Methanococcus maripaludis (strain DSM

Query: 2 MQKCWEEKF 10
MQK W EK+
Sbjct: 1 MQKPWVEKY 9


>sp|RFCS_METM7|REPLICATION factor C small subunit|Methanococcus maripaludis (strain C7 /

Query: 2 MQKCWEEKF 10
MQK W EK+
Sbjct: 1 MQKPWVEKY 9


>sp|PNPH_ARCFU|PROBABLE 6-oxopurine nucleoside phosphorylase|Archaeoglobus fulgidus (strain

Query: 2 MQKCWEEK 9
++K WEEK
Sbjct: 232 VKKVWEEK 239


>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 IMQKCWEEKF 10
IM+K W EK+
Sbjct: 4 IMEKPWVEKY 13


>sp|RFCS_METVS|REPLICATION factor C small subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 MQKCWEEKF 10
MQK W EK+
Sbjct: 1 MQKPWVEKY 9


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KCWEEKF 10
KCW + F
Sbjct: 111 KCWAKDF 117


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 MQKCWEEK 9
M+K W+EK
Sbjct: 15 MRKIWDEK 22


>sp|RFCS_THEKO|REPLICATION factor C small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 IMQKCWEEKF 10
I++K W EK+
Sbjct: 10 ILEKPWVEKY 19


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IMQKCWE 7
I+QK WE
Sbjct: 238 IIQKAWE 244


>sp|SYT_METAR|THREONINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IMQKCWEEKF 10
++ + WEE+F
Sbjct: 424 VIVEMWEERF 433


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 1 IMQKCWEEKF 10
+ +K W+EK+
Sbjct: 321 LYEKRWKEKY 330


>sp|Y1237_ARCFU|UNCHARACTERIZED protein AF_1237|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KCWEEK 9
K WEEK
Sbjct: 42 KVWEEK 47


>sp|RFCS_PYRFU|REPLICATION factor C small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IMQKCWEEKF 10
+++K W EK+
Sbjct: 10 VLEKPWVEKY 19


>sp|GATB_ARCFU|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Archaeoglobus fulgidus (strain ATCC

Query: 4 KCWE 7
KCWE
Sbjct: 358 KCWE 361


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MQKCWEE 8
M+K WEE
Sbjct: 27 MRKVWEE 33


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 IMQKCWEEKF 10
+++K W EK+
Sbjct: 12 VLEKPWVEKY 21




189|Sequence|941|950|WEEKFEIRPP

>sp|YB50_METTW|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 WEEKFEIRP 9
W E+ E+RP
Sbjct: 212 WAEQVEVRP 220


>sp|Y1150_METTH|IRON-SULFUR cluster assembly SufBD family|Methanothermobacter

Query: 1 WEEKFEIRP 9
W E+ E+RP
Sbjct: 212 WAEQVEVRP 220


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 WEEKFEI 7
WE++FEI
Sbjct: 380 WEKQFEI 386


>sp|RS7_SACS2|SMALL ribosomal subunit protein uS7|Saccharolobus solfataricus (strain

Query: 1 WEEKFEIRPP 10
W+ K EIR P
Sbjct: 16 WDTKVEIRDP 25


>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 1 WEEKFEIRPP 10
W+ K EIR P
Sbjct: 17 WDTKVEIRDP 26


>sp|RS7_SULAC|SMALL ribosomal subunit protein uS7|Sulfolobus acidocaldarius (strain

Query: 1 WEEKFEIRPP 10
W+ K E+R P
Sbjct: 18 WDTKVEVRDP 27


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 WEEKFEI 7
WE +FEI
Sbjct: 380 WERQFEI 386


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WEEKFEI 7
WE +FEI
Sbjct: 380 WERQFEI 386


>sp|PYRI_METKA|ASPARTATE carbamoyltransferase regulatory chain|Methanopyrus kandleri

Query: 3 EKFEIRPP 10
EKF+++PP
Sbjct: 91 EKFQVKPP 98


>sp|COBQ_THEAC|PROBABLE cobyric acid synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WEEKFEI 7
WEE +EI
Sbjct: 374 WEEGYEI 380


>sp|RNJ_METJA|RIBONUCLEASE J|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EEKFEIRPP 10
E+KF++R P
Sbjct: 118 EKKFDVRNP 126


>sp|COMB_THEVO|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma volcanium (strain

Query: 3 EKFEIRPP 10
EK+ I+PP
Sbjct: 64 EKYGIKPP 71


>sp|PYRI_ARCFU|ASPARTATE carbamoyltransferase regulatory chain|Archaeoglobus fulgidus

Query: 2 EEKFEIRPP 10
E KF++ PP
Sbjct: 90 ERKFKVSPP 98


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 WEEKFEI 7
WE++FE+
Sbjct: 380 WEKQFEL 386


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WEEKFEI 7
WE++FE+
Sbjct: 378 WEKQFEL 384


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 WEEKFEI 7
WE++FE+
Sbjct: 378 WEKQFEL 384


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum

Query: 3 EKFEIRPP 10
EK+ I+PP
Sbjct: 64 EKYGIKPP 71


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WEEKFEI 7
WE++FE+
Sbjct: 378 WEKQFEL 384


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WEEKFEI 7
WE++FE+
Sbjct: 380 WEKQFEL 386


>sp|GPMA_METPE|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanosphaerula palustris (strain ATCC

Query: 1 WEEKFEIRPP 10
W + +RPP
Sbjct: 113 WRRGYAVRPP 122


>sp|THIC_META3|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 WEEKFEI 7
WE++FE+
Sbjct: 380 WEKQFEL 386


>sp|RL11_NITMS|LARGE ribosomal subunit protein uL11|Nitrosopumilus maritimus (strain

Query: 1 WEEKFE 6
W+EKF+
Sbjct: 154 WDEKFQ 159


>sp|GPMA_METB6|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanoregula boonei (strain DSM 21154

Query: 1 WEEKFEIRPP 10
W + +RPP
Sbjct: 113 WRRGYAVRPP 122


>sp|SYFB_METBF|PHENYLALANINE--TRNA ligase beta subunit|Methanosarcina barkeri (strain Fusaro /

Query: 4 KFEIRPP 10
K+EI+PP
Sbjct: 74 KYEIKPP 80


>sp|Y348_THEGJ|UPF0215 protein TGAM_0348|Thermococcus gammatolerans (strain DSM 15229

Query: 1 WEEKFEI 7
W E+FE+
Sbjct: 127 WRERFEV 133


>sp|TRCM_PYRAB|TRNA (cytosine(49)-C(5))-methyltransferase|Pyrococcus abyssi (strain

Query: 2 EEKFEIRP 9
EEKFE+ P
Sbjct: 56 EEKFELEP 63


>sp|GPMA_METVS|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 WEEKFEIRPP 10
W +E PP
Sbjct: 136 WRRSYETAPP 145


>sp|THIC_ARCFU|PHOSPHOMETHYLPYRIMIDINE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WEEKFEI 7
WE +FE+
Sbjct: 379 WERQFEL 385


>sp|PPSA_AERPE|PHOSPHOENOLPYRUVATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 WEEKFEIRPP 10
W FE+ PP
Sbjct: 329 WAIDFELSPP 338


>sp|Y2365_ARCFU|IRON-SULFUR cluster assembly SufBD family|Archaeoglobus fulgidus (strain ATCC

Query: 1 WEEKFEIRP 9
W+ E+RP
Sbjct: 172 WDTTIEVRP 180




190|Sequence|946|955|EIRPPFSQLV

>sp|TMCA_HALVD|TRNA(MET) cytidine acetyltransferase TmcA|Haloferax volcanii (strain ATCC

Query: 1 EIRPPFSQLV 10
+ RPP QLV
Sbjct: 401 DARPPVDQLV 410


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 3 RPPFSQ 8
RPPFS+
Sbjct: 247 RPPFSE 252


>sp|Y898_ARCFU|UNCHARACTERIZED protein AF_0898|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIRPPFSQ 8
+IRPP SQ
Sbjct: 43 DIRPPISQ 50


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EIRPPFSQLV 10
E+RP QLV
Sbjct: 501 EVRPRIKQLV 510


>sp|LEUD2_PYRAB|3-ISOPROPYLMALATE dehydratase small subunit 2|Pyrococcus abyssi (strain GE5 /

Query: 1 EIRPPFSQLV 10
E+RP F++ V
Sbjct: 40 EVRPEFAEKV 49


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 EIRPPFSQLV 10
+ RPP QL+
Sbjct: 421 DARPPVDQLI 430


>sp|SRP54_HYPBU|SIGNAL recognition particle 54 kDa|Hyperthermus butylicus (strain DSM 5456

Query: 1 EIRPPFSQLV 10
E++PP++ V
Sbjct: 91 EVKPPYTPYV 100




191|Sequence|951|960|FSQLVLLLER

>sp|Y1477_THEKO|MEMO1 family protein TK1477|Thermococcus kodakarensis (strain ATCC

Query: 3 QLVLLLER 10
+LVL+LER
Sbjct: 17 ELVLMLER 24




192|Sequence|956|965|LLLERLLGEG

>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LERLLGEG 10
L+R+LGEG
Sbjct: 51 LQRVLGEG 58


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 LLERLLGEG 10
L ERL+GEG
Sbjct: 109 LKERLIGEG 117


>sp|PUR2_METLZ|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLLERLLGE 9
+L ERLLGE
Sbjct: 181 ILEERLLGE 189


>sp|FTSY_HALVD|SIGNAL recognition particle receptor FtsY|Haloferax volcanii (strain ATCC

Query: 2 LLERLLGE 9
++ERLLGE
Sbjct: 447 MVERLLGE 454


>sp|RFCL_ARCFU|REPLICATION factor C large subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLERLLGEG 10
++ER++GEG
Sbjct: 77 VIERIVGEG 85


>sp|DNAG_METPE|DNA primase DnaG|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LLERLLGEG 10
LL+RL+G+G
Sbjct: 383 LLDRLVGKG 391


>sp|LYSZ_CENSY|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Cenarchaeum symbiosum

Query: 2 LLERLLGEG 10
LLE LLG+G
Sbjct: 142 LLETLLGKG 150


>sp|THI4_PYRAB|THIAMINE thiazole synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 LLERLLGEG 10
L+ER+ GEG
Sbjct: 182 LIERIPGEG 190


>sp|COMC_METTH|L-SULFOLACTATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LLERLLG 8
LLER+LG
Sbjct: 321 LLERILG 327




193|Sequence|961|970|LLGEGYKKKY

>sp|THSA_SACSH|CHAPERONIN subunit alpha|Saccharolobus shibatae (strain ATCC 51178

Query: 4 EGYKKKY 10
EGYKK Y
Sbjct: 122 EGYKKAY 128


>sp|THSA_SACS2|CHAPERONIN subunit alpha|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 EGYKKKY 10
EGYKK Y
Sbjct: 122 EGYKKAY 128


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLGEGYKKKY 10
+L EGYK +Y
Sbjct: 363 VLSEGYKDEY 372


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 LLGEGYKKKY 10
LL E Y +KY
Sbjct: 334 LLAEAYPEKY 343


>sp|SYP_METLZ|PROLINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LLGEGYKKKY 10
LLG G + KY
Sbjct: 444 LLGTGVRSKY 453


>sp|PUR7_CENSY|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Cenarchaeum symbiosum (strain A)

Query: 1 LLGEGYKKKY 10
L G GYKK++
Sbjct: 225 LDGAGYKKRF 234


>sp|KTHY_THEAC|PROBABLE thymidylate kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LLGEGYK 7
LLGEGY+
Sbjct: 24 LLGEGYR 30


>sp|SYR_METPE|ARGININE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 5 GYKKKY 10
GYKK Y
Sbjct: 291 GYKKSY 296


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 1 LLGEGYKKK 9
L+GEGY+ K
Sbjct: 113 LIGEGYEFK 121


>sp|SYD_PICTO|ASPARTATE--TRNA(ASP) ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LLGEGYKKKY 10
+LGE YK Y
Sbjct: 304 VLGERYKSFY 313


>sp|FDHB1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 2 LGEGYKKKY 10
+GE YK K+
Sbjct: 260 MGEDYKNKW 268


>sp|PTH_AERPE|PEPTIDYL-TRNA hydrolase|Aeropyrum pernix (strain ATCC 700893

Query: 1 LLGEGYKK 8
+ GEGYK+
Sbjct: 1 MTGEGYKQ 8




194|Sequence|966|975|YKKKYQQVDE

>sp|IF2P_METTH|PROBABLE translation initiation factor IF-2|Methanothermobacter

Query: 2 KKKYQQVDE 10
+KK+Q+VDE
Sbjct: 293 RKKFQKVDE 301


>sp|KORC_ARCFU|2-OXOGLUTARATE synthase subunit KorC|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YKKKYQQVD 9
Y+K Y QVD
Sbjct: 80 YRKYYPQVD 88


>sp|METK_METTM|S-ADENOSYLMETHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 YKKKYQQVDE 10
+KKKY V E
Sbjct: 185 FKKKYPAVGE 194


>sp|RPO1N_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Sulfolobus acidocaldarius (strain ATCC

Query: 2 KKKYQQVDE 10
K+ Y QVDE
Sbjct: 666 KEGYSQVDE 674


>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 YKKKYQQV 8
Y+K+YQ+V
Sbjct: 408 YRKEYQKV 415


>sp|YE1A_METJA|UNCHARACTERIZED protein MJ1417.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KKKYQQVDE 10
KK Y+Q+DE
Sbjct: 23 KKLYEQLDE 31


>sp|Y487_THEAC|PROTEIN Ta0487|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 KKKYQQVD 9
KKKY Q D
Sbjct: 101 KKKYGQAD 108


>sp|PIMT_PYRHO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 KKYQQVDE 10
KKY VDE
Sbjct: 47 KKYAHVDE 54


>sp|GGR_METBF|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YKKKYQQVDE 10
Y KKY ++D+
Sbjct: 53 YLKKYVEIDK 62




195|Sequence|971|980|QQVDEEFLRS

>sp|NASA_HALMT|ASSIMILATORY nitrate reductase|Haloferax mediterranei (strain ATCC 33500

Query: 2 QVDEEFLRS 10
Q+DE F+RS
Sbjct: 246 QIDESFVRS 254


>sp|NTPTH_IGNH4|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 DEEFLRS 10
DEEFLR+
Sbjct: 135 DEEFLRA 141


>sp|Y1438_METS3|MEMO1 family protein Msm_1438|Methanobrevibacter smithii (strain ATCC

Query: 2 QVDEEF 7
QVDEEF
Sbjct: 111 QVDEEF 116


>sp|CBIT_PYRAE|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 4 DEEFLRS 10
DEEF+R+
Sbjct: 12 DEEFIRA 18


>sp|FDHA1_METMP|F420-DEPENDENT formate dehydrogenase 1 subunit|Methanococcus maripaludis (strain

Query: 3 VDEEFLRS 10
VDEEF+++
Sbjct: 232 VDEEFIKN 239


>sp|AROC_ARCFU|CHORISMATE synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 QVDEEFLR 9
+VDEEF++
Sbjct: 33 EVDEEFIQ 40




196|Sequence|976|985|EFLRSDHPAI

>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 1 EFLRSDHPAI 10
+FLR +HPA+
Sbjct: 212 KFLRVNHPAV 221


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 EFLRSDHPAI 10
++ + DHPA+
Sbjct: 1103 KYYKEDHPAV 1112


>sp|GATD_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanopyrus kandleri (strain AV19 /

Query: 1 EFLRSDH 7
EFLRSD+
Sbjct: 295 EFLRSDY 301


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 2 FLRSDHPAI 10
F+RSD P++
Sbjct: 50 FIRSDPPSV 58


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 SDHPAI 10
+DHPAI
Sbjct: 82 TDHPAI 87


>sp|DP2L_ARCFU|DNA polymerase II large subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 EFLRSDHPAI 10
+FL ++HP I
Sbjct: 427 DFLENNHPLI 436


>sp|GSA_METHJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EFLRSDHPAI 10
+ L +DHP+I
Sbjct: 95 QILIADHPSI 104


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 2 FLRSDHPAI 10
F R DHP +
Sbjct: 366 FTREDHPDV 374


>sp|SYG_METKA|GLYCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 EFLRSDHPA 9
EF R+DH A
Sbjct: 95 EFFRADHLA 103


>sp|DP2L_METMJ|DNA polymerase II large subunit|Methanoculleus marisnigri (strain ATCC

Query: 1 EFLRSDHP 8
EF+ ++HP
Sbjct: 412 EFMENNHP 419


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EFLRSDHPAI 10
+FL ++HP I
Sbjct: 65 KFLLAEHPVI 74


>sp|DCD_IGNH4|DCTP deaminase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 FLRSDHPAI 10
FLR+D P +
Sbjct: 148 FLRTDSPVL 156


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 RSDHP 8
RSDHP
Sbjct: 503 RSDHP 507


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 EFLRSDHPAI 10
EF+ ++HP +
Sbjct: 452 EFIENNHPLV 461


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 LRSDHP 8
LR DHP
Sbjct: 183 LRGDHP 188


>sp|DP2L_METJA|DNA polymerase II large subunit|Methanocaldococcus jannaschii (strain

Query: 1 EFLRSDHPAI 10
+FL ++HP +
Sbjct: 439 DFLENNHPLL 448


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EFLRSDHP 8
EF+ ++HP
Sbjct: 451 EFIENNHP 458




197|Sequence|981|990|DHPAILRSQA

>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 1 DHPAILR 7
DHPA+L+
Sbjct: 1108 DHPAVLK 1114


>sp|ASPGP_PYRAB|PLANT-TYPE L-asparaginase|Pyrococcus abyssi (strain GE5 /

Query: 1 DHPAILRS 8
+HP +LRS
Sbjct: 167 EHPEVLRS 174


>sp|GATA_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 DHPAILRS 8
D PA+LR+
Sbjct: 449 DEPAVLRA 456


>sp|ATGT_METHJ|TRNA-GUANINE(15) transglycosylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 HPAILR 7
HPA+LR
Sbjct: 335 HPALLR 340




198|Sequence|986|995|LRSQARLPGF

>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 LRSQARLPGF 10
LR ARLPGF
Sbjct: 144 LRELARLPGF 153


>sp|SYR_NATPD|ARGININE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LRSQARLPG 9
LR+ ARLPG
Sbjct: 500 LRTVARLPG 508




199|Sequence|991|1000|RLPGFHGLRS

>sp|RS4_KORCO|SMALL ribosomal subunit protein uS4|Korarchaeum cryptofilum (strain

Query: 1 RLPGFHGLRS 10
RL G++GLR+
Sbjct: 28 RLAGYYGLRN 37


>sp|AATI_METMA|A-TYPE ATP synthase subunit I|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PGFHGLR 9
PG H LR
Sbjct: 613 PGLHALR 619


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 1 RLPGFHGLR 9
R+ G HGLR
Sbjct: 90 RVAGEHGLR 98


>sp|LEUC_METS5|3-ISOPROPYLMALATE dehydratase large subunit|Metallosphaera sedula (strain ATCC

Query: 1 RLPGFHGL 8
RLP FH +
Sbjct: 89 RLPNFHDI 96


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RLPGFHGL 8
R+PGF+ L
Sbjct: 23 RIPGFYKL 30


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 3 PGFHG 7
PGFHG
Sbjct: 124 PGFHG 128


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 LPGFHGL 8
LPGF G+
Sbjct: 320 LPGFEGI 326


>sp|HIS5_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 3 PGFHGL 8
PG HGL
Sbjct: 91 PGVHGL 96


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLPGFHGL 8
RLP FH L
Sbjct: 365 RLPEFHQL 372


>sp|RL14_IGNH4|LARGE ribosomal subunit protein uL14|Ignicoccus hospitalis (strain

Query: 2 LPGFHG 7
+PG+HG
Sbjct: 39 VPGYHG 44




200|Sequence|996|1005|HGLRSPLDTS

>sp|SYT_THEAC|THREONINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HGLRSPLDTS 10
HG+RS +DTS
Sbjct: 585 HGIRSEIDTS 594


>sp|ARLY_PYRAE|ARGININOSUCCINATE lyase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLRSPLD 8
G+R+PLD
Sbjct: 196 GVRTPLD 202


>sp|FILI_METH6|METHANOGENESIS regulatory histidine kinase FilI|Methanothrix harundinacea (strain

Query: 1 HGLRSPLDT 9
H LRSPL T
Sbjct: 677 HDLRSPLVT 685


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HGLRSPLD 8
HG+ SPL+
Sbjct: 48 HGVYSPLE 55


>sp|RRP4_THEAM|EXOSOME complex component Rrp4|Thermosphaera aggregans (strain DSM 11486

Query: 1 HGLRSPLDT 9
H LR+ LDT
Sbjct: 116 HNLRNYLDT 124


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 HGLRSPLDTS 10
G SPLDT+
Sbjct: 134 QGAASPLDTA 143


>sp|SAT_HYPBU|SULFATE adenylyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 HGLRSPLD 8
HG+ SPL+
Sbjct: 48 HGVYSPLE 55


>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 1 HGLRSP 6
HGLR P
Sbjct: 222 HGLREP 227


>sp|KAE1B_METMJ|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 HGLRSPLDTS 10
HG+ PLD S
Sbjct: 299 HGVVLPLDQS 308


>sp|ARFB_METST|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanosphaera stadtmanae (strain

Query: 1 HGLRSPLDT 9
HG P+DT
Sbjct: 35 HGAALPIDT 43




201|Sequence|1001|1010|PLDTSSVLYT

>sp|AATC_THEVO|A-TYPE ATP synthase subunit C|Thermoplasma volcanium (strain ATCC 51530

Query: 1 PLDTSSVLY 9
P D SSVLY
Sbjct: 34 PSDFSSVLY 42


>sp|KDPQ_HALS3|PROBABLE Kdp system regulatory protein|Halobacterium salinarum (strain ATCC

Query: 1 PLDTSSVL 8
P+DT S+L
Sbjct: 139 PIDTDSIL 146




202|Sequence|1006|1015|SVLYTAVQPN

>sp|PTFC_HALVD|PTS system fructose-specific EIIC component|Haloferax volcanii (strain

Query: 1 SVLYTAVQPN 10
+V+ TA++PN
Sbjct: 354 AVIATAIKPN 363


>sp|COXX_PYRAR|PROTOHEME IX farnesyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 LYTAVQPN 10
LY+A QPN
Sbjct: 25 LYSARQPN 32




203|Sequence|1011|1020|AVQPNEGDND

>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 AVQPNEGD 8
AV+P EGD
Sbjct: 407 AVKPGEGD 414


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 AVQPNEGD 8
AV+P EGD
Sbjct: 407 AVKPGEGD 414


>sp|PURL_PYRAR|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 AVQPNEGD 8
AV+P EGD
Sbjct: 409 AVKPGEGD 416


>sp|RL18A_PYRIL|LARGE ribosomal subunit protein eL20|Pyrobaculum islandicum (strain DSM

Query: 1 AVQPNEGDND 10
AVQP E +D
Sbjct: 55 AVQPEEARSD 64


>sp|RBL_METJA|RIBULOSE bisphosphate carboxylase|Methanocaldococcus jannaschii (strain

Query: 3 QPNEGD 8
+PNEGD
Sbjct: 9 RPNEGD 14


>sp|KITH_HALWD|THYMIDINE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AVQPNEGDN 9
AV PNEG++
Sbjct: 66 AVVPNEGED 74


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 PNEGD 8
PNEGD
Sbjct: 284 PNEGD 288


>sp|ADHS_HALSA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 VQPNEGD 8
V PN+GD
Sbjct: 64 VHPNKGD 70


>sp|RUXX_THEVO|PUTATIVE snRNP Sm-like protein|Thermoplasma volcanium (strain ATCC 51530

Query: 2 VQPNEGDND 10
V P++GDN+
Sbjct: 75 VSPSKGDNE 83




204|Sequence|1016|1025|EGDNDYIIPL

>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 GDNDYIIPL 10
G +DY+IPL
Sbjct: 50 GSHDYLIPL 58


>sp|MPTA_METLZ|GTP cyclohydrolase MptA|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 EGDNDYIIPL 10
E D D I+PL
Sbjct: 208 ETDGDIIVPL 217


>sp|ASSY_METBU|ARGININOSUCCINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 4 NDYIIPL 10
NDYI PL
Sbjct: 70 NDYIFPL 76


>sp|REP75_PYRAB|REPLICATION initiator protein|Pyrococcus abyssi (strain GE5 /

Query: 2 GDNDYIIPL 10
GDN Y +PL
Sbjct: 429 GDNYYSLPL 437


>sp|RIBB_METMA|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EGDNDYIIP 9
EG+ D +IP
Sbjct: 39 EGETDLVIP 47


>sp|RIBB_METAC|3,4-DIHYDROXY-2-BUTANONE 4-phosphate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 EGDNDYIIP 9
EG+ D +IP
Sbjct: 39 EGETDLVIP 47


>sp|AGLB2_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EGDNDYIIP 9
+G N++I+P
Sbjct: 722 KGKNEFIVP 730


>sp|KDPB_THEAC|POTASSIUM-TRANSPORTING ATPase ATP-binding subunit|Thermoplasma acidophilum (strain ATCC

Query: 1 EGDNDYII 8
E D+DYII
Sbjct: 374 ESDSDYII 381


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 EGDNDYIIP 9
EG+ D IIP
Sbjct: 542 EGERDLIIP 550


>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 EGDNDYIIP 9
EG+ D IIP
Sbjct: 542 EGERDLIIP 550


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EGDNDYIIPL 10
EGD+ +IPL
Sbjct: 125 EGDDWKVIPL 134


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 3 DNDYIIPL 10
DN Y +PL
Sbjct: 187 DNGYAVPL 194


>sp|CHEB_THEKO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Thermococcus

Query: 5 DYIIPL 10
DYI+PL
Sbjct: 334 DYIVPL 339


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EGDNDYIIP 9
EG++ Y+IP
Sbjct: 243 EGEDLYLIP 251


>sp|PUR7_THEVO|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDNDYIIPL 10
G ++Y+IPL
Sbjct: 88 GSSNYVIPL 96


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDNDYIIP 9
GDN+YII
Sbjct: 109 GDNEYIIS 116


>sp|PFDA_METKA|PREFOLDIN subunit alpha|Methanopyrus kandleri (strain AV19 /

Query: 1 EGDNDYIIPL 10
EGD + ++P+
Sbjct: 59 EGDEEVLVPV 68


>sp|Y1506_METJA|UNCHARACTERIZED protein MJ1506|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGDNDYIIPL 10
+ +N YIIP+
Sbjct: 244 KANNQYIIPI 253


>sp|TRPC_PYRNV|INDOLE-3-GLYCEROL phosphate synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GDNDYII 8
GD DYII
Sbjct: 195 GDVDYII 201


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGDNDYIIP 9
EG++ Y+IP
Sbjct: 243 EGEDLYLIP 251


>sp|COPP_THEVO|BIFUNCTIONAL phosphopantetheine adenylyltransferase/NTP phosphatase|Thermoplasma

Query: 2 GDNDYII 8
GDNDY I
Sbjct: 210 GDNDYAI 216


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 EGDNDYIIP 9
EG++ Y+IP
Sbjct: 243 EGEDLYLIP 251


>sp|RL10E_HYPBU|LARGE ribosomal subunit protein uL16|Hyperthermus butylicus (strain DSM

Query: 2 GDNDYII 8
GD DYI+
Sbjct: 46 GDYDYIV 52


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EGDNDYIIP 9
EG++ Y+IP
Sbjct: 243 EGEDLYLIP 251


>sp|FRHG_METVO|COENZYME F420 hydrogenase subunit gamma|Methanococcus voltae

Query: 1 EGDNDYIIPL 10
EGD +Y+ P
Sbjct: 157 EGDMEYLEPF 166


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 EGDNDYIIP 9
EG++ Y+IP
Sbjct: 243 EGEDLYLIP 251


>sp|RADA_PYRHO|DNA repair and recombination protein|Pyrococcus horikoshii (strain ATCC

Query: 3 DNDYIIPL 10
DN Y +PL
Sbjct: 190 DNGYAVPL 197


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 3 DNDYIIPL 10
+ND+++P+
Sbjct: 109 ENDFLVPM 116


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 5 DYIIPL 10
DY++PL
Sbjct: 335 DYVVPL 340


>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 5 DYIIPL 10
DY++PL
Sbjct: 335 DYVVPL 340


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 1 EGDNDYIIP 9
+GD D I+P
Sbjct: 256 KGDADIIVP 264


>sp|SYP_IGNH4|PROLINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 EGDNDYI 7
+GD DY+
Sbjct: 246 DGDKDYV 252


>sp|MDH_PYRCJ|MALATE dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EGDNDY 6
EG NDY
Sbjct: 58 EGSNDY 63


>sp|SYP_METTH|PROLINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EGDNDYI 7
EGD++Y+
Sbjct: 255 EGDHEYV 261




205|Sequence|1021|1030|YIIPLPDPKP

>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 IIPLPDPK 9
++P PDPK
Sbjct: 164 VVPSPDPK 171


>sp|CPKA_PYRHO|CARBAMATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IIPLPDPK 9
++P PDPK
Sbjct: 164 VVPSPDPK 171


>sp|CPKA_PYRAB|CARBAMATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 IIPLPDPK 9
++P PDPK
Sbjct: 164 VVPSPDPK 171


>sp|NADM_METTP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 YIIPLPD 7
YIIPLPD
Sbjct: 69 YIIPLPD 75


>sp|NADM_THEKO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 YIIPLPD 7
Y+IPLPD
Sbjct: 73 YLIPLPD 79


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 IIPLPDPK 9
++P PDPK
Sbjct: 164 VVPSPDPK 171


>sp|ARCC_THEAC|CARBAMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IIPLPDPK 9
++P PDP+
Sbjct: 155 VVPSPDPR 162


>sp|NADM_THEON|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 YIIPLPD 7
Y+IPLPD
Sbjct: 72 YLIPLPD 78


>sp|NADM_PYRHO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 YIIPLPD 7
Y+IPLPD
Sbjct: 71 YLIPLPD 77


>sp|NADM_PYRFU|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 YIIPLPD 7
Y+IPLPD
Sbjct: 73 YLIPLPD 79


>sp|GLNB4_METBA|NITROGEN fixation nifHD2 region GlnB-like|Methanosarcina barkeri

Query: 4 PLPDPK 9
PLPDP+
Sbjct: 49 PLPDPE 54


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 3 IPLPDPK 9
IP PDPK
Sbjct: 375 IPQPDPK 381


>sp|UREE_NATPD|UREASE accessory protein UreE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YIIPLPDPKP 10
+++ LP P P
Sbjct: 88 FVVDLPSPGP 97


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YIIPLPD 7
YIIP+PD
Sbjct: 72 YIIPMPD 78


>sp|PUR5_METJA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YIIPLPDPKP 10
YI LP+P P
Sbjct: 259 YIDNLPEPLP 268


>sp|RGYRA_METKA|REVERSE gyrase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 IIPLPDPKP 10
++ +PDP+P
Sbjct: 350 VVEMPDPEP 358


>sp|NADM_PYRAB|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 YIIPLPD 7
Y++PLPD
Sbjct: 71 YLVPLPD 77


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 IPLPDPK 9
IP+P PK
Sbjct: 18 IPIPKPK 24


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 3 IPLPDPKP 10
+PLP KP
Sbjct: 270 VPLPAQKP 277


>sp|NADM2_SULAC|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YIIPLPD 7
YIIP+PD
Sbjct: 72 YIIPIPD 78


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IIPLPDPKP 10
++ PDP+P
Sbjct: 170 LLGFPDPEP 178


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 1 YIIPLPD 7
Y++P PD
Sbjct: 167 YVVPTPD 173


>sp|TIAS_CENSY|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Cenarchaeum symbiosum (strain

Query: 1 YIIPLPDPKP 10
Y+I DP+P
Sbjct: 262 YVIDAADPRP 271


>sp|PURL_HALLT|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Halorubrum lacusprofundi (strain ATCC 49239

Query: 5 LPDPKP 10
LPDP+P
Sbjct: 407 LPDPEP 412


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 1 YIIPLPDP 8
YI+ PDP
Sbjct: 182 YIVEYPDP 189


>sp|SPEE_KORCO|POLYAMINE aminopropyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 YIIPLPDPKP 10
YI+PL PKP
Sbjct: 6 YIMPLRLPKP 15


>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 1 YIIPLPDPKP 10
+++PLPD P
Sbjct: 254 HLLPLPDGGP 263


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 36 YIIDTPPPYP 45


>sp|BGAL_SULAC|BETA-GALACTOSIDASE acidocaldarius (strain ATCC 33909

Query: 2 IIPLPDPKP 10
I P P PKP
Sbjct: 87 IFPRPLPKP 95


>sp|NADM_IGNH4|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 YIIPLPD 7
YIIP+PD
Sbjct: 71 YIIPVPD 77


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 40 YIIDTPPPYP 49


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 40 YIIDTPPPYP 49


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 40 YIIDTPPPYP 49


>sp|NARG_HALMT|RESPIRATORY nitrate reductase subunit alpha|Haloferax mediterranei (strain ATCC

Query: 5 LPDPKP 10
LPDP P
Sbjct: 145 LPDPNP 150


>sp|LYSY_SULAC|[LYSW]-L-2-AMINOADIPATE/[LYSW]-L-GLUTAMATE phosphate reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IIPLPDPK 9
I P PDPK
Sbjct: 281 IHPYPDPK 288


>sp|Y1747_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 IPLPDPKP 10
IP P P+P
Sbjct: 305 IPAPAPQP 312


>sp|SYV_NATPD|VALINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 38 YIIDTPPPYP 47


>sp|SYV_ARCFU|VALINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 36 YIIDTPPPYP 45


>sp|RFRNP_HALVD|RNA-FREE ribonuclease P|Haloferax volcanii (strain ATCC 29605

Query: 1 YIIPLPDPKP 10
Y++ L P+P
Sbjct: 210 YLVALDSPRP 219


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 3 IPLPDPK 9
+P+P+PK
Sbjct: 318 LPVPEPK 324


>sp|FLAA_METVO|FLAGELLIN A|Methanococcus voltae

Query: 1 YIIPLPDPKP 10
Y+ P P KP
Sbjct: 82 YVTPSPGSKP 91


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 YIIPLPDPKP 10
Y+I P P P
Sbjct: 38 YVIDTPPPYP 47


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 YIIPLPDPKP 10
Y+I P P P
Sbjct: 38 YVIDTPPPYP 47


>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 39 YIIDTPPPYP 48


>sp|TRPB2_METTH|TRYPTOPHAN synthase beta chain 2|Methanothermobacter thermautotrophicus

Query: 4 PLPDPK 9
PLP+PK
Sbjct: 26 PLPEPK 31


>sp|SYV_METTP|VALINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 YIIPLPDPKP 10
YII P P P
Sbjct: 37 YIIDTPPPYP 46




206|Sequence|1026|1035|PDPKPEVADE

>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii (strain

Query: 1 PDPKPEVA 8
P PKP++A
Sbjct: 315 PPPKPQIA 322


>sp|SYR_SACS2|ARGININE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PDPKPEVADE 10
PDP+P V +
Sbjct: 174 PDPEPNVKKD 183


>sp|GUAAA_IGNH4|GMP synthase [glutamine-hydrolyzing] subunit A|Ignicoccus hospitalis

Query: 1 PDPKPEVAD 9
P PKPE D
Sbjct: 95 PSPKPEYGD 103


>sp|RACD_THEK8|ASPARTATE racemase|Thermococcus sp. (strain KS-8)

Query: 1 PDPKPEV 7
PDP+PE+
Sbjct: 59 PDPRPEL 65


>sp|Y1465_ARCFU|UNCHARACTERIZED protein AF_1465|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PDPKPEV 7
P+PKPEV
Sbjct: 32 PEPKPEV 38


>sp|NK_THEAC|NUCLEOSIDE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 KPEVADE 10
KP++ADE
Sbjct: 115 KPQLADE 121


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM

Query: 2 DPKPEV 7
DPKPEV
Sbjct: 32 DPKPEV 37


>sp|RUVB_METB6|HOLLIDAY junction branch migration complex|Methanoregula boonei (strain

Query: 1 PDPKPEVADE 10
P+P P+ ADE
Sbjct: 8 PEPVPDDADE 17


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 2 DPKPEV 7
DPKPEV
Sbjct: 32 DPKPEV 37


>sp|KPRS_SULTO|RIBOSE-PHOSPHATE pyrophosphokinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 DPKPEVADE 10
DP PE+A E
Sbjct: 143 DPMPELAKE 151


>sp|Y1609_METJA|UNCHARACTERIZED ATP-binding protein MJ1609|Methanocaldococcus jannaschii (strain

Query: 3 PKPEVADE 10
PK EV DE
Sbjct: 302 PKVEVGDE 309


>sp|PUR5_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 PKPEVADE 10
P PEVA E
Sbjct: 106 PDPEVAGE 113


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PDPKPEVAD 9
P P+P+ AD
Sbjct: 280 PHPRPQAAD 288


>sp|KAD_PYRHO|ADENYLATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PDPKPEVADE 10
PD +PE+ ++
Sbjct: 159 PDDRPEIVEK 168




207|Sequence|1031|1040|EVADEGPLEG

>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EVADEGPL 8
EVADEGP
Sbjct: 238 EVADEGPF 245


>sp|CAS6B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Saccharolobus solfataricus (strain ATCC

Query: 1 EVADEGPLE 9
EVADEG E
Sbjct: 96 EVADEGIFE 104


>sp|GATA_HALMA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Haloarcula marismortui (strain ATCC

Query: 1 EVADEGPLEG 10
E AD+GPL G
Sbjct: 14 EGADDGPLAG 23


>sp|TRMY_NATPD|TRNA (pseudouridine(54)-N(1))-methyltransferase|Natronomonas pharaonis

Query: 1 EVADEGPL 8
VAD+GPL
Sbjct: 118 SVADDGPL 125


>sp|GLK_PYRCJ|GLUCOKINASE calidifontis (strain DSM 21063

Query: 1 EVADEGPL 8
EVA EGPL
Sbjct: 181 EVAGEGPL 188


>sp|FTSY_THEAC|SIGNAL recognition particle receptor FtsY|Thermoplasma acidophilum

Query: 1 EVADEGPLE 9
EVADE PL+
Sbjct: 22 EVADEIPLK 30


>sp|IF2B_THEGJ|TRANSLATION initiation factor 2 subunit|Thermococcus gammatolerans (strain

Query: 1 EVADEGPLEG 10
EVA G LEG
Sbjct: 72 EVATAGTLEG 81


>sp|GATA_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Natronomonas pharaonis (strain ATCC

Query: 1 EVADEGPLEG 10
E D+GPL+G
Sbjct: 13 EPTDDGPLDG 22


>sp|MOBA_METMA|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina mazei

Query: 4 DEGPLEG 10
D GPLEG
Sbjct: 92 DAGPLEG 98


>sp|MOBA_METAC|PROBABLE molybdenum cofactor guanylyltransferase|Methanosarcina

Query: 4 DEGPLEG 10
D GPLEG
Sbjct: 92 DAGPLEG 98


>sp|IF2B_THEKO|TRANSLATION initiation factor 2 subunit|Thermococcus kodakarensis (strain

Query: 1 EVADEGPLEG 10
EVA G LEG
Sbjct: 72 EVATAGTLEG 81


>sp|Y1852_ARCFU|UNCHARACTERIZED protein AF_1852|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVADEGP 7
E+ DEGP
Sbjct: 57 ELTDEGP 63


>sp|MRE11_PYRFU|DNA double-strand break repair protein|Pyrococcus furiosus (strain ATCC

Query: 1 EVADEGPLE 9
+V +EGPLE
Sbjct: 381 KVEEEGPLE 389


>sp|Y708_METMA|UPF0284 protein MM_0708|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ADEGPLE 9
ADE PLE
Sbjct: 176 ADENPLE 182


>sp|SYS_HALLT|SERINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 DEGPLEG 10
DEGP EG
Sbjct: 357 DEGPAEG 363


>sp|Y3887_METAC|UPF0284 protein MA_3887|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ADEGPLE 9
ADE PLE
Sbjct: 176 ADENPLE 182


>sp|IF2B_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 EVADEGPLEG 10
E+A G LEG
Sbjct: 70 EIATAGTLEG 79




208|Sequence|1036|1045|GPLEGSPSLA

>sp|PYRB_NATPD|ASPARTATE carbamoyltransferase catalytic subunit|Natronomonas pharaonis

Query: 2 PLEGSPSLA 10
P EGSP LA
Sbjct: 105 PSEGSPKLA 113


>sp|FENR_SACS2|FERREDOXIN--NADP reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LEGSPSLA 10
+EGSP LA
Sbjct: 285 MEGSPKLA 292


>sp|RS12_THEAC|SMALL ribosomal subunit protein uS12|Thermoplasma acidophilum (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_METB6|SMALL ribosomal subunit protein uS12|Methanoregula boonei (strain DSM

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_THEVO|SMALL ribosomal subunit protein uS12|Thermoplasma volcanium (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_NANEQ|SMALL ribosomal subunit protein uS12|Nanoarchaeum equitans (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 39 PLEGAP 44


>sp|RAD50_HALVD|DNA double-strand break repair Rad50|Haloferax volcanii (strain ATCC

Query: 2 PLEGSP 7
P+EGSP
Sbjct: 460 PVEGSP 465


>sp|RS12_METAR|SMALL ribosomal subunit protein uS12|Methanocella arvoryzae (strain DSM

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 EGSPSLA 10
EGSP LA
Sbjct: 499 EGSPDLA 505


>sp|RS12_METST|SMALL ribosomal subunit protein uS12|Methanosphaera stadtmanae (strain

Query: 2 PLEGSP 7
PLEGSP
Sbjct: 37 PLEGSP 42


>sp|RS12_METMJ|SMALL ribosomal subunit protein uS12|Methanoculleus marisnigri (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_PICTO|SMALL ribosomal subunit protein uS12|Picrophilus torridus (strain ATCC

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|PURL_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GPLEGSPSL 9
GP G P+L
Sbjct: 451 GPFSGRPNL 459


>sp|RS12_METLZ|SMALL ribosomal subunit protein uS12|Methanocorpusculum labreanum

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_AERPE|SMALL ribosomal subunit protein uS12|Aeropyrum pernix (strain ATCC

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_SULTO|SMALL ribosomal subunit protein uS12|Sulfurisphaera tokodaii (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_HALMA|SMALL ribosomal subunit protein uS12|Haloarcula marismortui (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_METHJ|SMALL ribosomal subunit protein uS12|Methanospirillum hungatei JF-1

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|KORA_METJA|2-OXOGLUTARATE synthase subunit KorA|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GPLEGSPSLA 10
GP G P++A
Sbjct: 108 GPSTGQPTMA 117


>sp|RS12_STAMF|SMALL ribosomal subunit protein uS12|Staphylothermus marinus (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_HALSA|SMALL ribosomal subunit protein uS12|Halobacterium salinarum (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_HALS3|SMALL ribosomal subunit protein uS12|Halobacterium salinarum (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_PYRAE|SMALL ribosomal subunit protein uS12|Pyrobaculum aerophilum (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_NATPD|SMALL ribosomal subunit protein uS12|Natronomonas pharaonis (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|ANTRB_HALVD|PUTATIVE ABC transporter anion-binding protein|Haloferax volcanii (strain

Query: 1 GPLEGSPSL 9
GPL+G P++
Sbjct: 236 GPLKGGPTI 244


>sp|RS12_METTH|SMALL ribosomal subunit protein uS12|Methanothermobacter

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 37 PLEGAP 42


>sp|RS12_PYRCJ|SMALL ribosomal subunit protein uS12|Pyrobaculum calidifontis (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_METM7|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_METMP|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_METM5|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|RS12_HALWD|SMALL ribosomal subunit protein uS12|Haloquadratum walsbyi (strain DSM

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 38 PLEGAP 43


>sp|RS12_HYPBU|SMALL ribosomal subunit protein uS12|Hyperthermus butylicus (strain DSM

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 43 PLEGAP 48


>sp|GVPD1_HALSA|PROTEIN GvpD1|Halobacterium salinarum (strain ATCC 700922

Query: 2 PLEGSPSL 9
P EGSP L
Sbjct: 319 PREGSPGL 326


>sp|NNR_HYPBU|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Hyperthermus butylicus (strain

Query: 2 PLEGSPSL 9
PL GSP++
Sbjct: 299 PLRGSPNI 306


>sp|RS12_METS3|SMALL ribosomal subunit protein uS12|Methanobrevibacter smithii (strain

Query: 2 PLEGSP 7
PLEG+P
Sbjct: 37 PLEGAP 42




209|Sequence|1041|1050|SPSLASSTLN

***** No hits found ******


210|Sequence|1046|1055|SSTLNEVNTS

>sp|MSMJL_METJA|LARGE-CONDUCTANCE mechanosensitive channel MscMJLR|Methanocaldococcus jannaschii

Query: 2 STLNEVN 8
ST+NEVN
Sbjct: 328 STINEVN 334




211|Sequence|1051|1060|EVNTSSTISC

>sp|TIAS_HALWD|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Haloquadratum walsbyi (strain

Query: 3 NTSSTISC 10
N SSTI+C
Sbjct: 333 NVSSTITC 340




212|Sequence|1056|1065|STISCDSPLE

>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 4 SCDSPLE 10
SCD+P+E
Sbjct: 189 SCDNPVE 195


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 2 TISCDSPLE 10
T SC PLE
Sbjct: 326 TCSCSQPLE 334


>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 ISCDSPLE 10
I+CD P E
Sbjct: 134 IACDKPWE 141


>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 SCDSPLE 10
+CDSP+E
Sbjct: 428 ACDSPVE 434


>sp|KHSE_AERPE|HOMOSERINE kinase|Aeropyrum pernix (strain ATCC 700893

Query: 1 STISCDSPL 9
S I CD+P+
Sbjct: 291 SCICCDNPM 299


>sp|SYV_METAC|VALINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 CDSPLE 10
CD+P+E
Sbjct: 341 CDTPIE 346


>sp|SYV_METMA|VALINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 CDSPLE 10
CD+P+E
Sbjct: 341 CDTPIE 346


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 CDSPLE 10
CD+P+E
Sbjct: 341 CDTPIE 346


>sp|HCP_METTH|HYDROXYLAMINE reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 5 CDSPL 9
CDSPL
Sbjct: 283 CDSPL 287


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 CDSPLE 10
C+SPLE
Sbjct: 432 CESPLE 437


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 ISCDSP 8
ISCD P
Sbjct: 380 ISCDEP 385




213|Sequence|1061|1070|DSPLEPQDEP

>sp|PUR5_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DSPLEPQD 8
D P+EPQ+
Sbjct: 258 DDPMEPQN 265


>sp|PUR5_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DSPLEPQD 8
D P EPQ+
Sbjct: 258 DDPFEPQN 265


>sp|PYRDB_SULAC|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Sulfolobus acidocaldarius

Query: 2 SPLEPQDEP 10
SPLEP P
Sbjct: 47 SPLEPHRSP 55


>sp|PUR5_ARCFU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSPLEPQD 8
D PL+PQ+
Sbjct: 257 DKPLKPQE 264


>sp|SYFA_METVS|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus vannielii (strain ATCC 35089

Query: 1 DSPLEPQDEP 10
D+ EPQD P
Sbjct: 268 DTLFEPQDHP 277


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 DSPLEPQDEP 10
D+ EPQD P
Sbjct: 268 DTLFEPQDHP 277


>sp|PUR5_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 PLEPQD 8
PLEPQ+
Sbjct: 265 PLEPQE 270


>sp|SYFA_METMP|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain DSM 14266

Query: 1 DSPLEPQDEP 10
D+ EPQD P
Sbjct: 268 DTLFEPQDHP 277


>sp|SYFA_METM7|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C7 /

Query: 1 DSPLEPQDEP 10
D+ EPQD P
Sbjct: 268 DTLFEPQDHP 277


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 3 PLEPQDEP 10
PL+P+ EP
Sbjct: 403 PLDPKPEP 410


>sp|PUR5_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 PLEPQD 8
PLEPQ+
Sbjct: 265 PLEPQE 270


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 DSPLEPQD 8
+ PLEPQ+
Sbjct: 437 EKPLEPQE 444


>sp|SYFA_ARCFU|PHENYLALANINE--TRNA ligase alpha subunit|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DSPLEPQDEP 10
D+ +PQD P
Sbjct: 250 DALFQPQDHP 259


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 SPLEPQDEP 10
SPL+ DEP
Sbjct: 205 SPLKAPDEP 213


>sp|SYFA_METLZ|PHENYLALANINE--TRNA ligase alpha subunit|Methanocorpusculum labreanum (strain ATCC

Query: 1 DSPLEPQDEP 10
DS +PQD P
Sbjct: 251 DSLYQPQDHP 260


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 1 DSPLEPQDEP 10
D+ +PQD P
Sbjct: 268 DALFQPQDHP 277


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DSPLEPQDEP 10
D+ +PQD P
Sbjct: 256 DALFQPQDHP 265


>sp|PHS_HALLT|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Halorubrum lacusprofundi

Query: 1 DSPLEPQDE 9
D P+EP DE
Sbjct: 7 DEPVEPADE 15


>sp|SYFA_METHJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DSPLEPQDEP 10
D+ +PQD P
Sbjct: 252 DALFQPQDHP 261


>sp|SYFA_METAC|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DSPLEPQDEP 10
D+ +PQD P
Sbjct: 268 DALFQPQDHP 277


>sp|GGR2_METKA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanopyrus kandleri (strain AV19 /

Query: 4 LEPQDE 9
+EPQDE
Sbjct: 57 IEPQDE 62


>sp|SYFA_METMA|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DSPLEPQDEP 10
D+ +PQD P
Sbjct: 271 DALFQPQDHP 280




214|Sequence|1066|1075|PQDEPEPEPQ

>sp|GLMM_METKA|PROBABLE phosphoglucosamine mutase|Methanopyrus kandleri (strain AV19 /

Query: 1 PQDEPEPEPQ 10
P EPEP+P+
Sbjct: 205 PGREPEPKPE 214


>sp|RFCL_METAR|REPLICATION factor C large subunit|Methanocella arvoryzae (strain DSM 22066

Query: 1 PQDEPEPEPQ 10
PQ+ P PEP+
Sbjct: 525 PQESPLPEPE 534


>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DEPEPEP 9
DEP+P P
Sbjct: 138 DEPKPLP 144


>sp|SYR_SULAC|ARGININE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 EPEPEPQ 10
EPEP P+
Sbjct: 169 EPEPSPK 175


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 3 DEPEPEPQ 10
+EP P+PQ
Sbjct: 121 NEPFPQPQ 128


>sp|IF2G_SULTO|TRANSLATION initiation factor 2 subunit|Sulfurisphaera tokodaii (strain DSM

Query: 3 DEPEPEPQ 10
+EP P+PQ
Sbjct: 121 NEPFPQPQ 128


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 DEPEPEPQ 10
+EP P+PQ
Sbjct: 118 NEPCPQPQ 125


>sp|DNAG_THEGJ|DNA primase DnaG|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PQDEPEPEP 9
P+ EP+P+P
Sbjct: 329 PKHEPKPQP 337


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 1 PQDEPEPEPQ 10
P +PEP P+
Sbjct: 209 PGRDPEPVPE 218


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 3 DEPEPEP 9
D PEPEP
Sbjct: 73 DPPEPEP 79




215|Sequence|1071|1080|EPEPQLELQV

>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC 700893

Query: 1 EPEPQLELQ 9
+P P+LELQ
Sbjct: 108 QPPPELELQ 116


>sp|Y522_METJA|UNCHARACTERIZED protein MJ0522|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EPEPQLELQ 9
+PE QLE Q
Sbjct: 44 KPEKQLEAQ 52


>sp|MCRAM_METAC|[METHYL coenzyme M reductase]-L-arginine

Query: 1 EPEPQLELQV 10
+PEP+ +QV
Sbjct: 156 DPEPEASIQV 165




216|Sequence|1076|1085|LELQVEPEPE

>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 4 QVEPEPE 10
Q+EP PE
Sbjct: 673 QIEPAPE 679


>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 3 LQVEPEPE 10
L++EP PE
Sbjct: 674 LEIEPAPE 681


>sp|TBP_NATPD|TATA-BOX-BINDING protein|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LELQVEPEPE 10
LE+QV+ +PE
Sbjct: 89 LEIQVDEDPE 98


>sp|AROK_THEGJ|SHIKIMATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 QVEPEP 9
+VEPEP
Sbjct: 162 EVEPEP 167




217|Sequence|1081|1090|EPEPELEQLP

>sp|PYRB_THEAC|ASPARTATE carbamoyltransferase catalytic subunit|Thermoplasma acidophilum

Query: 1 EPEPELEQLP 10
E +PE+++LP
Sbjct: 271 EIKPEVDELP 280


>sp|RADA_HALWD|DNA repair and recombination protein|Haloquadratum walsbyi (strain

Query: 2 PEPELEQLP 10
PE ELE LP
Sbjct: 2 PEDELEDLP 10


>sp|RADA_HALSA|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 PEPELEQLP 10
PE +LE+LP
Sbjct: 2 PESDLEELP 10


>sp|RADA_HALS3|DNA repair and recombination protein|Halobacterium salinarum (strain

Query: 2 PEPELEQLP 10
PE +LE+LP
Sbjct: 2 PESDLEELP 10


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 EPEPELEQL 9
EP+P +E+L
Sbjct: 850 EPDPVVEEL 858


>sp|SYK_CENSY|LYSINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 PEPELEQL 9
P PE+E+L
Sbjct: 419 PSPEIERL 426


>sp|PIMT1_METAC|PROTEIN-L-ISOASPARTATE O-methyltransferase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 PEPELEQL 9
PEP LEQL
Sbjct: 197 PEPLLEQL 204




218|Sequence|1086|1095|LEQLPDSGCP

>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LEQLPDS 7
LEQ+PDS
Sbjct: 192 LEQIPDS 198


>sp|RL13_PYRIL|LARGE ribosomal subunit protein uL13|Pyrobaculum islandicum (strain DSM

Query: 1 LEQLPDSG 8
LEQLP+ G
Sbjct: 8 LEQLPERG 15


>sp|TRUB_METTH|PROBABLE tRNA pseudouridine synthase B|Methanothermobacter

Query: 5 PDSGCP 10
PD GCP
Sbjct: 19 PDYGCP 24


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 EQLPDSG 8
+QLPD+G
Sbjct: 161 DQLPDTG 167


>sp|RL13_PYRAE|LARGE ribosomal subunit protein uL13|Pyrobaculum aerophilum (strain

Query: 1 LEQLPDSG 8
+ QLPD+G
Sbjct: 10 ISQLPDAG 17


>sp|CDC6_PICTO|ORC1-TYPE DNA replication protein|Picrophilus torridus (strain ATCC 700027

Query: 2 EQLPDSGCP 10
EQ+P+ G P
Sbjct: 114 EQIPNLGLP 122


>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 EQLPDSG 8
EQLPD G
Sbjct: 194 EQLPDHG 200


>sp|GCS2_HALVD|GLUTAMATE--CYSTEINE ligase|Haloferax volcanii (strain ATCC 29605

Query: 1 LEQLPDSGCP 10
E LP++G P
Sbjct: 187 FENLPNTGMP 196


>sp|Y1574_ARCFU|UNCHARACTERIZED protein AF_1574|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 PDSGCP 10
PD+ CP
Sbjct: 222 PDTACP 227


>sp|GCS2_HALLT|GLUTAMATE--CYSTEINE ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 LEQLPDSGCP 10
E LP++G P
Sbjct: 187 FENLPNTGIP 196


>sp|CYAS_METAC|CYSTEATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LPDSGCP 10
+PDSG P
Sbjct: 150 VPDSGIP 156


>sp|THII_METTH|PROBABLE tRNA sulfurtransferase|Methanothermobacter thermautotrophicus

Query: 4 LPDSGC 9
+PD GC
Sbjct: 341 IPDGGC 346




219|Sequence|1091|1100|DSGCPAPRAE

>sp|ENGB_META3|PROBABLE GTP-binding protein EngB|Methanococcus aeolicus (strain ATCC

Query: 3 GCPAP 7
GCPAP
Sbjct: 182 GCPAP 186


>sp|ADHS_METJA|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|ADHS_META3|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|ADHS_METVS|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 DSGCPAPR 8
D+G P PR
Sbjct: 136 DAGVPTPR 143


>sp|ADHS_METM6|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C6 /

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|ADHS_METM7|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C7 /

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|ADHS_METMP|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|ADHS_METM5|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanococcus maripaludis (strain C5 /

Query: 3 GCPAP 7
GCPAP
Sbjct: 200 GCPAP 204


>sp|Y452_METJA|UNCHARACTERIZED protein MJ0452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GCPAPRA 9
GCP P A
Sbjct: 9 GCPEPPA 15


>sp|SYE_STAMF|GLUTAMATE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 DSGCPAPRAE 10
DSG P P E
Sbjct: 195 DSGKPCPHRE 204


>sp|TRPE_AERPE|ANTHRANILATE synthase component 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 SGCPAPRA 9
SG P PRA
Sbjct: 348 SGAPKPRA 355


>sp|Y3242_HALS3|UPF0284 protein OE_3242F|Halobacterium salinarum (strain ATCC 29341

Query: 2 SGCPAP 7
SGCP P
Sbjct: 61 SGCPTP 66


>sp|Y1572_HALSA|UPF0284 protein VNG_1572C|Halobacterium salinarum (strain ATCC 700922

Query: 2 SGCPAP 7
SGCP P
Sbjct: 61 SGCPTP 66




220|Sequence|1096|1106|APRAEAEDSFL

>sp|ILVE_METTH|PUTATIVE branched-chain-amino-acid aminotransferase|Methanothermobacter

Query: 3 RAEAEDSF 10
RAE EDSF
Sbjct: 293 RAETEDSF 300


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 2 PRAEAEDSF 10
PR EAED
Sbjct: 283 PRGEAEDVL 291


>sp|AGL3_SULAC|UDP-SULFOQUINOVOSE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PRAEAEDSF 10
PR EAE+ +
Sbjct: 325 PRVEAEEHY 333


>sp|GLCDH_HALMT|GLUCOSE 1-dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 2 PRAEAEDSFL 11
PR++AE FL
Sbjct: 139 PRSQAELGFL 148


>sp|Y286_KORCO|UPF0282 protein Kcr_0286|Korarchaeum cryptofilum (strain OPF8)

Query: 5 EAEDSFL 11
E EDSFL
Sbjct: 162 EGEDSFL 168






THE END