PEO1_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|PYGSRLLVWM

>sp|Y1226_METJA|PUTATIVE cation-transporting ATPase MJ1226|Methanocaldococcus jannaschii

Query: 1 PYGSRLLVW 9
PY S+LL W
Sbjct: 742 PYPSKLLFW 750


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 GSRLLVW 9
GSR LVW
Sbjct: 269 GSRYLVW 275


>sp|FLPA_PYRIL|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum islandicum (strain

Query: 2 YGSRLLVW 9
YG RL+ W
Sbjct: 41 YGERLIKW 48


>sp|FLPA_PYRAE|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum aerophilum (strain

Query: 2 YGSRLLVW 9
YG RL+ W
Sbjct: 41 YGERLIKW 48


>sp|Y3515_METJA|UNCHARACTERIZED ATP-binding protein MJECL15|Methanocaldococcus jannaschii (strain

Query: 3 GSRLLVW 9
G+RLL+W
Sbjct: 168 GNRLLLW 174


>sp|IDI2_PYRAR|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 YGSRLLVWM 10
YG RL W+
Sbjct: 337 YGPRLRAWL 345


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 YGSRLLVWM 10
YG LVWM
Sbjct: 251 YGLERLVWM 259


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YGSRLLVWM 10
YG LVWM
Sbjct: 251 YGLERLVWM 259


>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 132 PYGASLLI 139


>sp|FLPA_PYRAR|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum arsenaticum (strain

Query: 2 YGSRLLVW 9
YG RL+ W
Sbjct: 41 YGERLIKW 48


>sp|SYA_THEKO|ALANINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 YGSRLLVWM 10
YG LVWM
Sbjct: 251 YGLERLVWM 259


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 YGSRLLVWM 10
YG LVWM
Sbjct: 251 YGLERLVWM 259


>sp|MPTE_METTH|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanothermobacter thermautotrophicus (strain

Query: 2 YGSRLLVWM 10
Y SRL+ W+
Sbjct: 213 YASRLIDWL 221


>sp|FLPA_PYRCJ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrobaculum calidifontis (strain

Query: 2 YGSRLLVW 9
YG RL+ W
Sbjct: 41 YGERLIKW 48


>sp|PSA_METTE|PROTEASOME subunit alpha|Methanosarcina thermophila

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 130 PYGTALLI 137


>sp|PSA_METPE|PROTEASOME subunit alpha|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 132 PYGTALLI 139


>sp|PSA_METMJ|PROTEASOME subunit alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 132 PYGTALLI 139


>sp|PSA_METMA|PROTEASOME subunit alpha|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 132 PYGTALLI 139


>sp|PSA_METBF|PROTEASOME subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 132 PYGTALLI 139


>sp|PSA_METB6|PROTEASOME subunit alpha|Methanoregula boonei (strain DSM 21154

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 132 PYGTALLI 139


>sp|PSA_METAC|PROTEASOME subunit alpha|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PYGSRLLV 8
PYG+ LL+
Sbjct: 130 PYGTALLI 137


>sp|KHSE_THEGJ|HOMOSERINE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 PYGSRLLVW 9
PY RL+ W
Sbjct: 220 PYRKRLMPW 228


>sp|OTC_HALWD|ORNITHINE carbamoyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 GSRLLVW 9
G+R LVW
Sbjct: 273 GTRTLVW 279


>sp|IDI2_PYRNV|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 YGSRLLVWM 10
YG RL W+
Sbjct: 339 YGPRLRSWL 347


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 2 YGSRLLVW 9
YG R L+W
Sbjct: 160 YGPRSLLW 167


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GSRLLVW 9
GSR LVW
Sbjct: 277 GSRYLVW 283


>sp|FLPA_PYRAB|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 YGSRLLVW 9
YG R++ W
Sbjct: 36 YGERVIKW 43


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 YGSRLLVWM 10
YG LVW+
Sbjct: 243 YGLERLVWL 251


>sp|FLPA_PYRFU|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus furiosus (strain ATCC

Query: 2 YGSRLLVW 9
YG R++ W
Sbjct: 36 YGERVIKW 43


>sp|FLPA_PYRHO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Pyrococcus horikoshii (strain

Query: 2 YGSRLLVW 9
YG R++ W
Sbjct: 36 YGERVIKW 43


>sp|Y2139_METS5|MEMO1 family protein Msed_2139|Metallosphaera sedula (strain ATCC 51363

Query: 2 YGSRLLVW 9
YGS++ +W
Sbjct: 90 YGSQVSIW 97




2|SequenceR|15|6|LLIRLPYGSR

>sp|IF6_METAC|TRANSLATION initiation factor 6|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 LPYGSR 10
LPYG+R
Sbjct: 70 LPYGAR 75


>sp|HMEA_ARCFU|HDR-LIKE menaquinol oxidoreductase iron-sulfur subunit|Archaeoglobus

Query: 2 LIRLPYGSR 10
+I PYG+R
Sbjct: 157 MIACPYGAR 165


>sp|Y2160_ARCFU|UNCHARACTERIZED protein AF_2160|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLIRLPYGSR 10
+++RLP G R
Sbjct: 127 IILRLPSGRR 136


>sp|TSR3_THEAC|16S rRNA aminocarboxypropyltransferase|Thermoplasma acidophilum

Query: 3 IRLPYGSR 10
+R PYG R
Sbjct: 79 LRFPYGRR 86


>sp|Y2298_ARCFU|UNCHARACTERIZED DNA primase small subunit-like|Archaeoglobus fulgidus (strain ATCC

Query: 2 LIRLPYG 8
LIRLPY
Sbjct: 228 LIRLPYS 234


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 2 LIRLPY 7
L+RLPY
Sbjct: 558 LVRLPY 563


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LLIRLPYGS 9
+L+R PYG+
Sbjct: 103 VLVRGPYGN 111




3|SequenceR|20|11|EGRLPLLIRL

>sp|SYT_ARCFU|THREONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGRLPLL 7
EGRLP+L
Sbjct: 488 EGRLPML 494


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 EGRLPLL 7
EGRLP L
Sbjct: 229 EGRLPFL 235


>sp|RTCA_METS5|RNA 3'-terminal phosphate cyclase|Metallosphaera sedula (strain ATCC

Query: 1 EGRLPLLIRL 10
EGR P +RL
Sbjct: 322 EGRSPFKLRL 331


>sp|TIAS_METAC|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanosarcina acetivorans

Query: 4 LPLLIRL 10
LPLL+RL
Sbjct: 36 LPLLVRL 42




4|SequenceR|25|16|RRGMWEGRLP

>sp|COFF_METJA|COENZYME gamma-F420-2:alpha-L-glutamate ligase|Methanocaldococcus jannaschii

Query: 1 RRGMWEGRL 9
+ +WEG+L
Sbjct: 163 KNAIWEGKL 171


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 3 GMWEGRL 9
GMW G+L
Sbjct: 271 GMWYGQL 277


>sp|FLPA_METJA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanocaldococcus jannaschii

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 225 GIWEGK 230


>sp|NADE_THESM|NH(3)-DEPENDENT NAD(+) synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 186 GLWEGQ 191


>sp|NADE_METJA|NH(3)-DEPENDENT NAD(+) synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 192 GLWEGQ 197


>sp|NADE_META3|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 188 GLWEGQ 193


>sp|RL32_ARCFU|LARGE ribosomal subunit protein eL32|Archaeoglobus fulgidus (strain

Query: 3 GMWEGRLP 10
G W GR+P
Sbjct: 52 GKWSGRIP 59


>sp|NADE_METBU|NH(3)-DEPENDENT NAD(+) synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 187 GLWEGQ 192


>sp|NADE_PYRFU|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 182 GLWEGQ 187


>sp|NADE_PYRAB|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus abyssi (strain GE5 /

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 182 GLWEGQ 187


>sp|NADE_PYRHO|NH(3)-DEPENDENT NAD(+) synthetase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GMWEGR 8
G+WEG+
Sbjct: 182 GLWEGQ 187




5|SequenceR|30|21|NRPLGRRGMW

>sp|RPO1C_THEKO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus kodakarensis (strain ATCC

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 319 RPIGRHGI 326


>sp|RPO1C_THEGJ|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus gammatolerans (strain DSM

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 319 RPIGRHGI 326


>sp|RPO1C_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Thermococcus celer

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 321 RPIGRHGI 328


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 PLGRRGMW 10
P G++G+W
Sbjct: 47 PYGKQGVW 54


>sp|RPO1C_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus horikoshii (strain ATCC

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 321 RPIGRHGV 328


>sp|RPO1C_PYRFU|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 321 RPIGRHGV 328


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 314 RPIGRHGV 321


>sp|RPO1C_PYRAB|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrococcus abyssi (strain GE5 /

Query: 2 RPLGRRGM 9
RP+GR G+
Sbjct: 321 RPIGRHGV 328


>sp|LMRAC_THELN|LEUCINE/METHIONINE racemase|Thermococcus litoralis (strain ATCC 51850

Query: 4 LGRRGMW 10
LGR G W
Sbjct: 250 LGRTGKW 256


>sp|LMRAC_THEKO|LEUCINE/METHIONINE racemase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LGRRGMW 10
LGR G W
Sbjct: 250 LGRTGKW 256




6|SequenceR|35|26|PGPALNRPLG

>sp|CPS_METS3|CARBAMOYL-PHOSPHATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 GPALNRPL 9
GP LN PL
Sbjct: 323 GPDLNEPL 330


>sp|GATA_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Sulfolobus acidocaldarius (strain ATCC

Query: 3 PALNRPLG 10
PAL++P+G
Sbjct: 428 PALSQPIG 435


>sp|THI4_METTH|THIAMINE thiazole synthase|Methanothermobacter thermautotrophicus (strain

Query: 2 GPALNRPLG 10
GP LN P G
Sbjct: 183 GPELNTPDG 191


>sp|S1PNA_SULTO|BIFUNCTIONAL sugar-1-phosphate

Query: 1 PGPALNRPLG 10
PG +NR +G
Sbjct: 385 PGAVVNRDVG 394


>sp|KATG_METHJ|CATALASE-PEROXIDASE hungatei JF-1 (strain ATCC

Query: 1 PGPALNRPL 9
P PA+N PL
Sbjct: 432 PIPAINHPL 440




7|SequenceR|40|31|YRRRPPGPAL

>sp|NADE_SULTO|NH(3)-DEPENDENT NAD(+) synthetase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RRPPGPAL 10
++PP PAL
Sbjct: 189 KKPPSPAL 196


>sp|AROA_NATPD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 116 RSRPQGPLL 124


>sp|GUAAB_METJA|GMP synthase [glutamine-hydrolyzing] subunit B|Methanocaldococcus

Query: 1 YRRRPPGPAL 10
YR+ PGP L
Sbjct: 184 YRQPFPGPGL 193


>sp|AROA_METAR|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 2 RRRPPGPAL 10
R+RP GP +
Sbjct: 116 RKRPNGPLI 124


>sp|RL34_AERPE|LARGE ribosomal subunit protein eL34|Aeropyrum pernix (strain ATCC

Query: 1 YRRRPPGPA 9
Y RR PGPA
Sbjct: 27 YERRKPGPA 35


>sp|AROA_METBU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcoides burtonii (strain DSM

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 116 RSRPNGPLL 124


>sp|AROA_HALWD|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 117 RSRPHGPLL 125


>sp|PFDB_METMJ|PREFOLDIN subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RRRPPGPA 9
+++PPGPA
Sbjct: 114 KQQPPGPA 121


>sp|AROA_METAC|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 116 RTRPNGPLL 124


>sp|NADE_SULAC|NH(3)-DEPENDENT NAD(+) synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RRPPGPAL 10
++PP PAL
Sbjct: 189 KKPPSPAL 196


>sp|RL10_METST|LARGE ribosomal subunit protein uL10|Methanosphaera stadtmanae (strain

Query: 5 PPGPAL 10
PPGP L
Sbjct: 127 PPGPIL 132


>sp|RL10_METBF|LARGE ribosomal subunit protein uL10|Methanosarcina barkeri (strain

Query: 5 PPGPAL 10
PPGP L
Sbjct: 133 PPGPIL 138


>sp|AROA_METMA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 116 RTRPNGPLL 124


>sp|AROA_KORCO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 2 RRRPPGPAL 10
RRRP GP +
Sbjct: 116 RRRPMGPII 124


>sp|RL10_METBU|LARGE ribosomal subunit protein uL10|Methanococcoides burtonii (strain

Query: 5 PPGPAL 10
PPGP L
Sbjct: 132 PPGPIL 137


>sp|RL10_METAC|LARGE ribosomal subunit protein uL10|Methanosarcina acetivorans (strain

Query: 5 PPGPAL 10
PPGP L
Sbjct: 133 PPGPIL 138


>sp|RL10_METMA|LARGE ribosomal subunit protein uL10|Methanosarcina mazei (strain ATCC

Query: 5 PPGPAL 10
PPGP L
Sbjct: 133 PPGPIL 138


>sp|AROA_HALLT|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Halorubrum lacusprofundi (strain ATCC

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 123 RSRPQGPLL 131


>sp|AROA_METTP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 2 RRRPPGPAL 10
R RP GP L
Sbjct: 115 RSRPNGPLL 123


>sp|PRIS_METBF|DNA primase small subunit PriS|Methanosarcina barkeri (strain Fusaro /

Query: 1 YRRRPPGP 8
+RR PGP
Sbjct: 406 HRRNQPGP 413


>sp|RS11_METLZ|SMALL ribosomal subunit protein uS11|Methanocorpusculum labreanum

Query: 2 RRRPPGPA 9
R+R PGP
Sbjct: 84 RQRSPGPG 91


>sp|OFOA2_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 3 RRPPGP 8
R PPGP
Sbjct: 228 RLPPGP 233


>sp|GUAA_PYRAE|GMP synthase [glutamine-hydrolyzing]|Pyrobaculum aerophilum (strain

Query: 1 YRRRPPGPAL 10
YR PGP L
Sbjct: 379 YRHPFPGPGL 388




8|SequenceR|45|36|LTEKRYRRRP

>sp|CAS5_METJA|CRISPR-ASSOCIATED protein Cas5|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTEKRYRR 8
L EKRYRR
Sbjct: 210 LIEKRYRR 217


>sp|NIFD_METMP|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 TEKRYRRRP 10
T KRY RP
Sbjct: 82 TTKRYPTRP 90


>sp|NIFD_METMI|NITROGENASE molybdenum-iron protein alpha chain|Methanococcus maripaludis

Query: 2 TEKRYRRRP 10
T KRY RP
Sbjct: 82 TTKRYPTRP 90


>sp|ARLY_METPE|ARGININOSUCCINATE lyase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 LTEKRYRR 8
+ E+RYRR
Sbjct: 468 IAEERYRR 475


>sp|SYK_METHJ|LYSINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 EKRYRRR 9
EKRYR+R
Sbjct: 153 EKRYRQR 159




9|SequenceR|50|41|MDLAQLTEKR

>sp|SYP_PICTO|PROLINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 MDLAQLTEKR 10
+DLA+L++KR
Sbjct: 16 IDLAKLSDKR 25


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 MDLAQLTEKR 10
MDL ++TE R
Sbjct: 1 MDLIEVTEGR 10


>sp|Y330_METJA|UNCHARACTERIZED protein MJ0330|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MDLAQLTEKR 10
MDL +TEK+
Sbjct: 66 MDLHTITEKQ 75


>sp|NADM_THEKO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 MDLAQLTEKR 10
++ A+LTEKR
Sbjct: 62 LEEAELTEKR 71




10|SequenceR|55|46|VPLVPMDLAQ

>sp|Y865_METJA|PUTATIVE methylthiotransferase MJ0865|Methanocaldococcus jannaschii (strain

Query: 1 VPLVPMDLAQ 10
+PL+P D+ Q
Sbjct: 152 LPLIPKDIEQ 161


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VPLVPMDLAQ 10
VPL+P D +
Sbjct: 322 VPLLPADFVE 331


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 VPLVPMDLAQ 10
VPL+P D +
Sbjct: 322 VPLLPADFVE 331


>sp|Y1856_ARCFU|UNCHARACTERIZED protein AF_1856|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLVPMDL 8
PL+P+DL
Sbjct: 75 PLLPLDL 81


>sp|ACTH_THEVO|ARCHAEAL actin homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LVPMDLAQ 10
+VP DLAQ
Sbjct: 224 VVPFDLAQ 231


>sp|ACTH_THEAC|ARCHAEAL actin homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LVPMDLAQ 10
+VP DLAQ
Sbjct: 224 VVPFDLAQ 231


>sp|QOXM_SULAC|QUINOL oxidase subunit 1/3|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 PLVPMDLA 9
PLVP+D A
Sbjct: 357 PLVPIDYA 364


>sp|Y1851_PYRFU|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus furiosus

Query: 1 VPLVPMDL 8
VP++P D+
Sbjct: 287 VPIIPKDI 294


>sp|SRP19_HALLT|SIGNAL recognition particle 19 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 4 VPMDLA 9
VPMDLA
Sbjct: 23 VPMDLA 28


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 VPLVPMDLA 9
VP+VP++L
Sbjct: 411 VPIVPINLG 419




11|SequenceR|60|51|IETATVPLVP

>sp|RFCL_PYRCJ|REPLICATION factor C large subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 IETATVPLV 9
IETA VP+V
Sbjct: 143 IETAKVPIV 151


>sp|RFCL_PYRNV|REPLICATION factor C large subunit|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 IETATVPLV 9
+ETA VP+V
Sbjct: 143 VETAKVPIV 151


>sp|Y516_METST|UPF0173 metal-dependent hydrolase Msp_0516|Methanosphaera stadtmanae

Query: 1 IETATVPLVP 10
I T TVPL+P
Sbjct: 218 IGTMTVPLMP 227


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 ATVPLVP 10
A+VPLVP
Sbjct: 147 ASVPLVP 153




12|SequenceR|65|56|RLYQRIETAT

>sp|Y1455_PYRHO|UPF0091 protein PH1455|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LYQRIETAT 10
+Y R++TAT
Sbjct: 32 VYNRMQTAT 40




13|SequenceR|70|61|PIGHGRLYQR

>sp|Y1182_METJA|UNCHARACTERIZED protein MJ1182|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PIGHGRLY 8
P+GHG +Y
Sbjct: 285 PLGHGNIY 292


>sp|PUR2_ARCFU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PIGHGRLYQR 10
P GH R Y+R
Sbjct: 215 PFGHARDYKR 224


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 44 IGHGRTY 50


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 50 IGHGRTY 56


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 47 IGHGRTY 53


>sp|SYC_METVS|CYSTEINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 38 IGHGRTY 44


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 48 IGHGRTY 54


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 53 IGHGRTY 59


>sp|SYC_STAMF|CYSTEINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 IGHGRLY 8
IGHGR+Y
Sbjct: 40 IGHGRVY 46


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 42 IGHGRTY 48


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IGHGRLY 8
+GHGR+Y
Sbjct: 37 VGHGRVY 43


>sp|SYL_THEVO|LEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 58 VGHGRTY 64


>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 49 VGHGRTY 55


>sp|SYL_PYRIL|LEUCINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 51 IGHGRTY 57


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 51 IGHGRTY 57


>sp|SYL_PYRAE|LEUCINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 51 IGHGRTY 57


>sp|SYL_THEAC|LEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 58 VGHGRTY 64


>sp|SYL_PYRCJ|LEUCINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 51 IGHGRTY 57


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IGHGRLY 8
+GHGR+Y
Sbjct: 39 VGHGRVY 45


>sp|SYL_PYRNV|LEUCINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IGHGRLY 8
IGHGR Y
Sbjct: 51 IGHGRTY 57


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 44 LGHGRTY 50


>sp|SYL2_SULAC|LEUCINE--TRNA ligase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 43 LGHGRTY 49


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 55 LGHGRTY 61


>sp|SYC_METMP|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 38 LGHGRTY 44


>sp|SYC_METM7|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 38 LGHGRTY 44


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 38 LGHGRTY 44


>sp|SYC_META3|CYSTEINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 IGHGRLY 8
+GHGR Y
Sbjct: 38 LGHGRTY 44


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IGHGRLY 8
+GHGR+Y
Sbjct: 37 VGHGRVY 43


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 PIGHGRLYQR 10
P+ GR+YQ+
Sbjct: 451 PMVTGRMYQK 460


>sp|SYC_PYRIL|CYSTEINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 IGHGRLY 8
+GHGR+Y
Sbjct: 37 VGHGRVY 43


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 2 IGHGRL 7
+GHGRL
Sbjct: 344 VGHGRL 349


>sp|Y1771_AERPE|MEMO1 family protein APE_1771|Aeropyrum pernix (strain ATCC 700893

Query: 1 PIGHGRLYQR 10
P+G GRL QR
Sbjct: 31 PLGPGRLPQR 40


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 IGHGRLY 8
+GHGR+Y
Sbjct: 37 VGHGRVY 43


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 2 IGHGRLYQR 10
IG G+LY++
Sbjct: 211 IGDGKLYKK 219


>sp|AMPPA_NATPD|AMP phosphorylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PIGHG 5
PIGHG
Sbjct: 321 PIGHG 325


>sp|TRUB_ARCFU|PROBABLE tRNA pseudouridine synthase B|Archaeoglobus fulgidus (strain ATCC

Query: 5 GRLYQR 10
GR+YQR
Sbjct: 121 GRIYQR 126


>sp|Y1164_METJA|PUTATIVE HTH-type transcriptional regulatory protein|Methanocaldococcus

Query: 1 PIGHGRLYQR 10
P+ HG +Y R
Sbjct: 84 PMEHGVVYDR 93


>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 5 GRLYQR 10
GR+YQR
Sbjct: 133 GRIYQR 138


>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 PIGHGR 6
PIGHG+
Sbjct: 46 PIGHGQ 51


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 PIGHGR 6
PIGHG+
Sbjct: 61 PIGHGQ 66




14|SequenceR|75|66|HGDQFPIGHG

>sp|RL6_PYRAE|LARGE ribosomal subunit protein uL6|Pyrobaculum aerophilum (strain ATCC

Query: 1 HGDQFPIGHG 10
HGD+ P HG
Sbjct: 166 HGDERPSPHG 175


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DQFPIGHG 10
D+ PIGH
Sbjct: 149 DKLPIGHA 156


>sp|DNLI_METJA|DNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDQFPIGH 9
G+ +PIGH
Sbjct: 476 GNLYPIGH 483


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HGDQFPIGHG 10
HG F I HG
Sbjct: 483 HGRDFLIAHG 492


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 HGDQFPIGHG 10
HG F I HG
Sbjct: 489 HGRDFLIAHG 498


>sp|FUMC_HALSA|FUMARATE hydratase class II|Halobacterium salinarum (strain ATCC 700922

Query: 1 HGDQFPI 7
H DQFP+
Sbjct: 86 HDDQFPV 92


>sp|CAH_METJA|PROBABLE carbonic anhydrase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GDQFPIGHG 10
GD IGHG
Sbjct: 64 GDYVSIGHG 72


>sp|DP2S_PYRHO|DNA polymerase II small subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 HGDQFPIGHG 10
HG F I HG
Sbjct: 492 HGRDFLIAHG 501


>sp|DMSA_HALSA|PUTATIVE dimethyl sulfoxide reductase catalytic|Halobacterium salinarum

Query: 1 HGDQFP 6
HGD+FP
Sbjct: 597 HGDKFP 602


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GDQFPI 7
GD+FPI
Sbjct: 193 GDKFPI 198


>sp|Y1138_METJA|UNCHARACTERIZED protein MJ1138|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GDQFPIGHG 10
GD+ +GHG
Sbjct: 75 GDKIYLGHG 83


>sp|TRPG1_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 1 HGDQFPIGH 9
HG FPI H
Sbjct: 118 HGKAFPIDH 126


>sp|PIMT_METTP|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 5 FPIGHG 10
PIGHG
Sbjct: 45 LPIGHG 50


>sp|PCNA_HALSA|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC

Query: 2 GDQFPI 7
GD+FPI
Sbjct: 218 GDEFPI 223


>sp|PCNA_HALS3|DNA polymerase sliding clamp|Halobacterium salinarum (strain ATCC 29341

Query: 2 GDQFPI 7
GD+FPI
Sbjct: 218 GDEFPI 223


>sp|SYL1_SULTO|LEUCINE--TRNA ligase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 DQFPIG 8
D+FP+G
Sbjct: 186 DEFPVG 191


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DQFPIG 8
D+FP+G
Sbjct: 183 DEFPVG 188


>sp|TRPG_HALVD|ANTHRANILATE synthase component 2|Haloferax volcanii (strain ATCC 29605

Query: 1 HGDQFPIGH 9
HG FP+ H
Sbjct: 110 HGKAFPVDH 118


>sp|PIMT_AERPE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 5 FPIGHG 10
PIGHG
Sbjct: 83 LPIGHG 88


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain

Query: 3 DQFPIGHG 10
D +PI HG
Sbjct: 38 DGYPIEHG 45


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 2 GDQFPIG 8
GD+ PIG
Sbjct: 247 GDRIPIG 253


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 2 GDQFPIG 8
GD+ PIG
Sbjct: 247 GDRIPIG 253


>sp|PIMT_HYPBU|PROTEIN-L-ISOASPARTATE O-methyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 5 FPIGHG 10
PIGHG
Sbjct: 60 LPIGHG 65


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 3 DQFPIG 8
D+FP+G
Sbjct: 70 DEFPVG 75




15|SequenceR|80|71|ARLCSHGDQF

>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 ARLCSHGDQF 10
ARL SHG++F
Sbjct: 10 ARLESHGERF 19


>sp|SAT_AERPE|SULFATE adenylyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 RLCSHGDQF 10
++C HGD++
Sbjct: 335 KVCPHGDEY 343


>sp|SDO1_THEKO|RIBOSOME maturation protein SDO1 homolog|Thermococcus kodakarensis (strain

Query: 1 ARLCSHGDQF 10
ARL +HG+ F
Sbjct: 11 ARLKTHGETF 20


>sp|AROD_HALMA|3-DEHYDROQUINATE dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RLCSHGD 8
R C+HGD
Sbjct: 137 RACAHGD 143


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 2 RLCSHGDQ 9
R C HGD+
Sbjct: 128 RTCYHGDR 135


>sp|SAT_STAMF|SULFATE adenylyltransferase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RLCSHGDQF 10
++C HG+++
Sbjct: 333 KICPHGEEY 341


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 2 RLCSHGDQF 10
R+C+ DQF
Sbjct: 253 RMCATEDQF 261


>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 LCSHGDQ 9
LC+ GDQ
Sbjct: 257 LCTFGDQ 263


>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 LCSHGDQ 9
+CS+GD+
Sbjct: 282 ICSYGDE 288


>sp|AROA_METTP|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 ARLCSHGDQF 10
A +C+ GD F
Sbjct: 206 AEICTDGDIF 215


>sp|NFI_PYRAE|ENDONUCLEASE V|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ARLCSHGDQF 10
A+LC GD +
Sbjct: 179 AQLCKSGDVY 188




16|SequenceR|85|76|AFPSLARLCS

>sp|PSB2_NITMS|PROTEASOME subunit beta 2|Nitrosopumilus maritimus (strain SCM1)

Query: 4 SLARLCS 10
SLARLCS
Sbjct: 90 SLARLCS 96


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 AFPSLARLC 9
A P +A+LC
Sbjct: 693 AIPLMAKLC 701




17|SequenceR|90|81|LQSSEAFPSL

***** No hits found ******


18|SequenceR|95|86|GTQGKLQSSE

>sp|RL24_METBF|LARGE ribosomal subunit protein uL24|Methanosarcina barkeri (strain

Query: 1 GTQGKLQS 8
GT+GK+Q+
Sbjct: 59 GTEGKVQA 66


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 GTQGKLQSS 9
GT GKL +S
Sbjct: 74 GTNGKLHNS 82




19|SequenceR|100|91|FSTTVGTQGK

>sp|EF1A_PYRIL|ELONGATION factor 1-alpha|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FSTTVGTQGK 10
F T +G QG+
Sbjct: 133 FETAIGPQGQ 142


>sp|EF1A_PYRCJ|ELONGATION factor 1-alpha|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FSTTVGTQGK 10
F T +G QG+
Sbjct: 133 FETAIGPQGQ 142


>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FSTTVGTQGK 10
F T +G +GK
Sbjct: 147 FQTLIGARGK 156


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 5 VGTQGK 10
+GTQGK
Sbjct: 177 IGTQGK 182


>sp|EF1A_PYRAR|ELONGATION factor 1-alpha|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FSTTVGTQGK 10
F T +G QG+
Sbjct: 133 FETAIGPQGQ 142




20|SequenceR|105|96|DIFLSFSTTV

>sp|KPRS_THEAC|RIBOSE-PHOSPHATE pyrophosphokinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DIFLSFSTTV 10
+IF S+ST++
Sbjct: 109 EIFASYSTSI 118




21|SequenceR|110|101|HGTTKDIFLS

>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 3 TTKDIFLS 10
TTKD+F +
Sbjct: 411 TTKDVFFT 418


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 3 TTKDIFLS 10
TTKD+F +
Sbjct: 411 TTKDVFFT 418


>sp|GATD_METBF|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina barkeri (strain Fusaro /

Query: 1 HGTTKDIF 8
HGTT D F
Sbjct: 229 HGTTSDDF 236


>sp|GATD_METAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanosarcina acetivorans (strain ATCC

Query: 1 HGTTKDIF 8
HGTT D F
Sbjct: 229 HGTTSDDF 236


>sp|PSTB_METST|PHOSPHATE import ATP-binding protein PstB|Methanosphaera stadtmanae (strain

Query: 2 GTTKDIFLS 10
G T DIFL+
Sbjct: 229 GNTDDIFLN 237


>sp|ATGT_NATPD|TRNA-GUANINE(15) transglycosylase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 HGTTKDIF 8
+GTT D+F
Sbjct: 185 YGTTLDVF 192


>sp|SPSS_META3|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GTTKDIFLS 10
GTTK+I +S
Sbjct: 351 GTTKEIKMS 359


>sp|DNLI_IGNH4|DNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GTTKDI 7
GTTKD+
Sbjct: 189 GTTKDV 194


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HGTTKDIFL 9
+GT KD+ L
Sbjct: 1315 YGTVKDLML 1323




22|SequenceR|115|106|TMCLFHGTTK

>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 1 TMCLFHGTT 9
++CL HG T
Sbjct: 93 SLCLLHGVT 101


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 1 TMCLFHGT 8
+ C FHGT
Sbjct: 19 SYCPFHGT 26


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LFHGTTK 10
L+HGTT+
Sbjct: 128 LYHGTTE 134


>sp|RS17_METMA|SMALL ribosomal subunit protein uS17|Methanosarcina mazei (strain ATCC

Query: 3 CLFHGT 8
C FHGT
Sbjct: 21 CPFHGT 26


>sp|RS17_METB6|SMALL ribosomal subunit protein uS17|Methanoregula boonei (strain DSM

Query: 3 CLFHGT 8
C FHGT
Sbjct: 21 CPFHGT 26


>sp|RS17_METAC|SMALL ribosomal subunit protein uS17A|Methanosarcina acetivorans

Query: 3 CLFHGT 8
C FHGT
Sbjct: 21 CPFHGT 26


>sp|RS17_ARCFU|SMALL ribosomal subunit protein uS17|Archaeoglobus fulgidus (strain

Query: 3 CLFHGT 8
C FHGT
Sbjct: 20 CPFHGT 25


>sp|RS17_METHJ|SMALL ribosomal subunit protein uS17|Methanospirillum hungatei JF-1

Query: 3 CLFHGT 8
C FHGT
Sbjct: 21 CPFHGT 26


>sp|RS17_HALWD|SMALL ribosomal subunit protein uS17|Haloquadratum walsbyi (strain DSM

Query: 1 TMCLFHGT 8
T C FHG+
Sbjct: 17 TNCPFHGS 24


>sp|RS17_METVA|SMALL ribosomal subunit protein uS17|Methanococcus vannielii

Query: 3 CLFHGT 8
C FHGT
Sbjct: 20 CPFHGT 25


>sp|RS17_METMJ|SMALL ribosomal subunit protein uS17|Methanoculleus marisnigri (strain

Query: 3 CLFHGT 8
C FHGT
Sbjct: 21 CPFHGT 26


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CLFHGTT 9
CL HG T
Sbjct: 587 CLMHGFT 593


>sp|RS17_METMP|SMALL ribosomal subunit protein uS17|Methanococcus maripaludis (strain

Query: 3 CLFHGT 8
C FHGT
Sbjct: 20 CPFHGT 25


>sp|HYPA_METST|HYDROGENASE maturation factor HypA|Methanosphaera stadtmanae (strain ATCC

Query: 3 CLFHGTTK 10
C FHG +K
Sbjct: 76 CGFHGISK 83




23|SequenceR|120|111|GEALSTMCLF

>sp|KAE1B_HALWD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 EALSTMC 8
E LSTMC
Sbjct: 266 EMLSTMC 272




24|SequenceR|125|116|FDEWSGEALS

>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 FDEWSG 6
FDEW G
Sbjct: 342 FDEWEG 347


>sp|DNLI_METHJ|DNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FDEWSGEAL 9
F EWSG+ L
Sbjct: 50 FPEWSGKKL 58


>sp|MCR_SULTO|MALONYL-COA reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FDEWSGE 7
FD W+G+
Sbjct: 302 FDRWAGD 308


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 3 EWSGEAL 9
EW+GEA
Sbjct: 454 EWAGEAF 460


>sp|SEPS_METTP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 FDEWSGE 7
FD W GE
Sbjct: 403 FDAWEGE 409


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DEWSGEAL 9
+EW+GE L
Sbjct: 269 EEWTGERL 276


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FDEWS 5
FDEWS
Sbjct: 53 FDEWS 57


>sp|Y1345_METJA|TPR repeat-containing protein MJ1345|Methanocaldococcus jannaschii

Query: 2 DEWSGEALS 10
D W+G+A++
Sbjct: 284 DAWNGKAIA 292


>sp|MCR_METS5|MALONYL CoA reductase (NADP)|Metallosphaera sedula (strain ATCC 51363

Query: 1 FDEWSG 6
FD W+G
Sbjct: 299 FDRWAG 304


>sp|THYX_PYRAB|FLAVIN-DEPENDENT thymidylate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FDEWSGEAL 9
+DEWS E+
Sbjct: 26 WDEWSTESF 34


>sp|DCUP_THEAC|UROPORPHYRINOGEN decarboxylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FDEWSG 6
FD W+G
Sbjct: 198 FDSWAG 203


>sp|ALAXL_PYRHO|ALANYL-TRNA editing protein AlaX-L|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 EWSGEAL 9
EW G+AL
Sbjct: 291 EWKGKAL 297


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 WSGEA 8
WSGEA
Sbjct: 313 WSGEA 317


>sp|CPKA_THEKO|CARBAMATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FDEWSGE 7
F EW GE
Sbjct: 284 FVEWGGE 290


>sp|AROE_HALMA|SHIKIMATE dehydrogenase (NADP(+))|Haloarcula marismortui (strain ATCC 43049

Query: 1 FDEWSGE 7
F+ W+GE
Sbjct: 244 FERWTGE 250


>sp|RGYRA_NANEQ|REVERSE gyrase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DEWSGEALS 10
D W G ALS
Sbjct: 227 DRWIGFALS 235


>sp|SYR_HALSA|ARGININE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 FDEWSGEA 8
FD W+GE+
Sbjct: 282 FDVWNGES 289


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 EWSGEAL 9
EW GE L
Sbjct: 210 EWKGEKL 216


>sp|SYY_THEGJ|TYROSINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 EWSGEAL 9
EW GE L
Sbjct: 210 EWKGEKL 216


>sp|CPKA_PYRFU|CARBAMATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FDEWSGE 7
F EW GE
Sbjct: 284 FIEWGGE 290


>sp|SYR_PYRAR|ARGININE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 WSGEA 8
WSGEA
Sbjct: 313 WSGEA 317


>sp|XYLS_SACS2|ALPHA-XYLOSIDASE solfataricus (strain ATCC 35092

Query: 1 FDEWSGEAL 9
+D W+GE L
Sbjct: 589 YDFWTGEKL 597




25|SequenceR|130|121|EVSAQFDEWS

>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 AQFDEWS 10
A+FDEWS
Sbjct: 51 AKFDEWS 57


>sp|LYSY_NATPD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 EVSAQFDEW 9
++ +Q+DEW
Sbjct: 103 DIESQYDEW 111


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EVSAQFDEWS 10
E+ AQ D W+
Sbjct: 61 ELQAQMDTWA 70


>sp|LYSY_HALMA|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 1 EVSAQFDEW 9
E AQ+DEW
Sbjct: 102 ESEAQYDEW 110


>sp|SLAA_METS5|S-LAYER protein A|Metallosphaera sedula (strain ATCC 51363

Query: 2 VSAQFDEWS 10
+ AQF EW+
Sbjct: 839 IYAQFAEWN 847


>sp|RS10_PYRHO|SMALL ribosomal subunit protein uS10|Pyrococcus horikoshii (strain ATCC

Query: 1 EVSAQFDEW 9
E SA FD W
Sbjct: 56 EGSATFDRW 64


>sp|RS10_PYRWO|SMALL ribosomal subunit protein uS10|Pyrococcus woesei

Query: 1 EVSAQFDEW 9
E SA FD W
Sbjct: 56 EGSATFDRW 64


>sp|RS10_PYRFU|SMALL ribosomal subunit protein uS10|Pyrococcus furiosus (strain ATCC

Query: 1 EVSAQFDEW 9
E SA FD W
Sbjct: 56 EGSATFDRW 64


>sp|RS10_PYRAB|SMALL ribosomal subunit protein uS10|Pyrococcus abyssi (strain GE5 /

Query: 1 EVSAQFDEW 9
E SA FD W
Sbjct: 56 EGSATFDRW 64


>sp|RS10_METM5|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSSFDRWT 65


>sp|RS10_METJA|SMALL ribosomal subunit protein uS10|Methanocaldococcus jannaschii

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSTFDRWT 65


>sp|RS10_METM6|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSSFDRWT 65


>sp|RS10_META3|SMALL ribosomal subunit protein uS10|Methanococcus aeolicus (strain

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSSFDRWT 65


>sp|RS10_METM7|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSSFDRWT 65


>sp|Y2072_ARCFU|UPF0235 protein AF_2072|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVSAQFDEW 9
EVS +DEW
Sbjct: 20 EVSFSYDEW 28


>sp|RS10_METMP|SMALL ribosomal subunit protein uS10|Methanococcus maripaludis (strain

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSSFDRWT 65


>sp|GAD_THETE|D-GLUCONATE dehydratase|Thermoproteus tenax

Query: 1 EVSAQFDEW 9
E+SA F EW
Sbjct: 175 EISAAFYEW 183


>sp|RS10_METVS|SMALL ribosomal subunit protein uS10|Methanococcus vannielii (strain

Query: 1 EVSAQFDEWS 10
E S+ FD W+
Sbjct: 56 EGSSSFDRWT 65


>sp|LYSY_HALWD|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 SAQFDEW 9
+ Q+DEW
Sbjct: 105 AEQYDEW 111


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 QFDEW 9
QFDEW
Sbjct: 543 QFDEW 547


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 QFDEW 9
QFDEW
Sbjct: 543 QFDEW 547


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 QFDEW 9
QFDEW
Sbjct: 543 QFDEW 547




26|SequenceR|135|126|GDGRGEVSAQ

>sp|CDC6I_HALMA|ORC1-TYPE DNA replication protein 9|Haloarcula marismortui (strain ATCC

Query: 1 GDGRGEVSAQ 10
GDG+GE+ A
Sbjct: 21 GDGKGEIFAN 30


>sp|MPCT_HALS3|TRANSDUCER protein MpcT|Halobacterium salinarum (strain ATCC 29341

Query: 2 DGRGEV 7
DGRGEV
Sbjct: 332 DGRGEV 337


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GRGEVS 8
GRGEVS
Sbjct: 333 GRGEVS 338




27|SequenceR|140|131|FGERAGDGRG

>sp|QUED_METJA|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Methanocaldococcus

Query: 1 FGERAGD 7
+GERAGD
Sbjct: 41 YGERAGD 47


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 1 FGERAGDG 8
FGERAG+
Sbjct: 228 FGERAGNA 235


>sp|PYRG_META3|CTP synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FGERAGDGR 9
FGER DG+
Sbjct: 360 FGERGIDGK 368


>sp|Y557_PICTO|PUTATIVE HTH-type transcriptional regulatory protein|Picrophilus torridus

Query: 2 GERAGDGR 9
GE++G GR
Sbjct: 78 GEKSGSGR 85


>sp|COFC_METMS|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanohalophilus mahii (strain ATCC 35705

Query: 1 FGERAGDGR 9
FG++ G GR
Sbjct: 194 FGKKEGKGR 202


>sp|G3P_METMP|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GERAGDGR 9
GE+AGD +
Sbjct: 111 GEKAGDAQ 118


>sp|G3P_METM7|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 2 GERAGDGR 9
GE+AGD +
Sbjct: 111 GEKAGDAQ 118


>sp|G3P_METM6|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C6 /

Query: 2 GERAGDGR 9
GE+AGD +
Sbjct: 111 GEKAGDAQ 118


>sp|G3P_METM5|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 2 GERAGDGR 9
GE+AGD +
Sbjct: 111 GEKAGDAQ 118


>sp|MPTA_THEAC|GTP cyclohydrolase MptA|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FGERAGD 7
+GER GD
Sbjct: 72 YGERIGD 78


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 3 ERAGDGRG 10
+ AGDG+G
Sbjct: 760 DAAGDGKG 767


>sp|Y294_THEVO|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 2 GERAGDGR 9
GER G+G+
Sbjct: 79 GERTGNGQ 86


>sp|HIS7_METMJ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FGERAGDGRG 10
E GDGRG
Sbjct: 78 LAESVGDGRG 87


>sp|Y2715_METAR|UPF0251 protein UNCMA_27150|Methanocella arvoryzae (strain DSM 22066

Query: 4 RAGDGRG 10
+ GDGRG
Sbjct: 135 KGGDGRG 141




28|SequenceR|145|136|AKSLLFGERA

>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 AKSLLFGERA 10
AK++LFGE A
Sbjct: 9 AKAILFGEHA 18


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 KSLLFGER 9
+SLLF ER
Sbjct: 410 RSLLFAER 417


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 KSLLFGER 9
+SLLF ER
Sbjct: 419 RSLLFAER 426


>sp|MVK_METJA|MEVALONATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AKSLLFGERA 10
+K +LFGE A
Sbjct: 7 SKVILFGEHA 16


>sp|MVK_PYRFU|MEVALONATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 9 AKVILFGEHS 18


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 SLLFGERA 10
++LFGER+
Sbjct: 281 AILFGERS 288


>sp|MVK_PYRHO|MEVALONATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 11 AKVILFGEHS 20


>sp|Y602_METJA|UNCHARACTERIZED protein MJ0602|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LLFGER 9
LLFGER
Sbjct: 78 LLFGER 83


>sp|MVK_THEON|MEVALONATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 9 AKIILFGEHS 18


>sp|MVK_THEKO|MEVALONATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 12 AKIILFGEHS 21


>sp|MVK_THESM|MEVALONATE kinase|Thermococcus sibiricus (strain DSM 12597

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 9 AKIILFGEHS 18


>sp|MVK_PYRAB|MEVALONATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 11 AKIILFGEHS 20


>sp|MVK_THEGJ|MEVALONATE kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AKSLLFGERA 10
AK +LFGE +
Sbjct: 9 AKIILFGEHS 18


>sp|Y528_PYRFU|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus furiosus (strain

Query: 2 KSLLFGER 9
KSL FGE+
Sbjct: 137 KSLSFGEK 144




29|SequenceR|150|141|DEFEPAKSLL

>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 DEFEPAKSLL 10
++FE AKSLL
Sbjct: 171 NQFELAKSLL 180


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 1 DEFEPAK 7
DEF+PAK
Sbjct: 1642 DEFDPAK 1648


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 2 EFEPAKSL 9
EFEPA+SL
Sbjct: 20 EFEPAESL 27


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 1 DEFEPAK 7
DEF+PAK
Sbjct: 718 DEFDPAK 724


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 1 DEFEPAK 7
DEF+PAK
Sbjct: 718 DEFDPAK 724


>sp|TYW1_PYRHO|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus horikoshii (strain ATCC

Query: 1 DEFEPAKSLL 10
DE+EP++ +L
Sbjct: 313 DEYEPSRVVL 322


>sp|TYW1_PYRAB|S-ADENOSYL-L-METHIONINE-DEPENDENT tRNA 4-demethylwyosine synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DEFEPAKSLL 10
DE+EP++ +L
Sbjct: 313 DEYEPSRVVL 322


>sp|RL15E_METS5|LARGE ribosomal subunit protein eL15|Metallosphaera sedula (strain ATCC

Query: 3 FEPAKSL 9
F PAKSL
Sbjct: 90 FSPAKSL 96


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 EFEPAKSLL 10
EFEP K L+
Sbjct: 321 EFEPGKRLM 329


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DEFEPAKSLL 10
D+F+PAK L
Sbjct: 712 DKFDPAKVTL 721


>sp|MEND_HALSA|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DEFEPAKSL 9
D+F+PA +L
Sbjct: 383 DDFQPAATL 391


>sp|MEND_HALS3|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DEFEPAKSL 9
D+F+PA +L
Sbjct: 383 DDFQPAATL 391


>sp|PCNA_METHJ|DNA polymerase sliding clamp|Methanospirillum hungatei JF-1 (strain

Query: 3 FEPAKSLL 10
+EPAKSL
Sbjct: 188 WEPAKSLF 195


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 1 DEFEPAK 7
DEF+P K
Sbjct: 1467 DEFDPTK 1473


>sp|SYI_SACI4|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 DEFEPAKSLL 10
D FEP K L
Sbjct: 664 DNFEPVKYTL 673


>sp|SYI_SACI3|ISOLEUCINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 DEFEPAKSLL 10
D FEP K L
Sbjct: 664 DNFEPVKYTL 673


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 1 DEFEPAK 7
DEF+P K
Sbjct: 1611 DEFDPTK 1617


>sp|Y1153_PYRAB|UPF0098 protein PYRAB11530|Pyrococcus abyssi (strain GE5 /

Query: 1 DEFEPAK 7
DEF PAK
Sbjct: 35 DEFIPAK 41


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DEFEPAK 7
DEF+P K
Sbjct: 1615 DEFDPTK 1621


>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 1 DEFEPAK 7
DEF+P K
Sbjct: 718 DEFDPTK 724




30|SequenceR|155|146|RVEESDEFEP

>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 2 VEESDEFEP 10
+E+SD FEP
Sbjct: 309 LEKSDTFEP 317


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 VEESDEFEP 10
+E+SD FEP
Sbjct: 309 LEKSDTFEP 317


>sp|Y070_ARCFU|UNCHARACTERIZED protein AF_0070|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RVEESDEFEP 10
RVEE +F P
Sbjct: 230 RVEEGGKFAP 239


>sp|Y1865_METTH|UPF0288 protein MTH_1865|Methanothermobacter thermautotrophicus (strain

Query: 1 RVEESDEFEP 10
R+E++DE+ P
Sbjct: 475 RLEDNDEYGP 484


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 318 IDVSDEIEP 326


>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 1 RVEESDEFE 9
R+E DEFE
Sbjct: 191 RLETGDEFE 199


>sp|KHSE_THEVO|HOMOSERINE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 RVEESDEFE 9
R+E SD+F+
Sbjct: 157 RIEVSDQFK 165


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 1 RVEESDEFEP 10
+V ESD F P
Sbjct: 55 KVAESDGFNP 64


>sp|GLPK_SACI6|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 320 IDVSDEIEP 328


>sp|GLPK_SACI4|GLYCEROL kinase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 320 IDVSDEIEP 328


>sp|GLPK_SACI7|GLYCEROL kinase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 320 IDVSDEIEP 328


>sp|GLPK_SACI2|GLYCEROL kinase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 320 IDVSDEIEP 328


>sp|GLPK1_SACS2|GLYCEROL kinase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 320 IDVSDEIEP 328


>sp|GLPK_SACI3|GLYCEROL kinase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 VEESDEFEP 10
++ SDE EP
Sbjct: 320 IDVSDEIEP 328


>sp|MTIP_METKA|PROBABLE S-methyl-5'-thioinosine phosphorylase|Methanopyrus kandleri

Query: 2 VEESDEFEP 10
V SDE+EP
Sbjct: 84 VINSDEYEP 92




31|SequenceR|160|151|RNWIRRVEES

>sp|PURA_METBF|ADENYLOSUCCINATE synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RNWIRRVEE 9
RN+++R+EE
Sbjct: 394 RNYVKRLEE 402


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 NWIRRVEE 9
NW ++VEE
Sbjct: 175 NWAKKVEE 182


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WIRRVEES 10
WIR++EE+
Sbjct: 1037 WIRKIEEN 1044


>sp|TRPB2_METTM|TRYPTOPHAN synthase beta chain 2|Methanothermobacter marburgensis (strain ATCC

Query: 1 RNWIRRVEES 10
R+WI VE++
Sbjct: 171 RDWISSVEDT 180


>sp|PURA2_METAC|ADENYLOSUCCINATE synthetase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RNWIRRVEE 9
+N+I+R+EE
Sbjct: 394 QNYIKRLEE 402


>sp|GLCT_SACS2|GLUCOSE import system permease protein|Saccharolobus solfataricus (strain

Query: 1 RNWIRR 6
R WIRR
Sbjct: 281 RRWIRR 286


>sp|TDXH_METMA|PEROXIREDOXIN mazei (strain ATCC BAA-159

Query: 3 WIRRVEE 9
W++R+EE
Sbjct: 79 WLKRIEE 85


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RNWIRRV 7
++WIRRV
Sbjct: 122 KSWIRRV 128


>sp|HIS6_METS5|IMIDAZOLE glycerol phosphate synthase subunit|Metallosphaera sedula (strain

Query: 2 NWIRRVEE 9
+W +RVEE
Sbjct: 155 DWAKRVEE 162


>sp|HIS6_METKA|IMIDAZOLE glycerol phosphate synthase subunit|Methanopyrus kandleri (strain

Query: 3 WIRRVEE 9
W +RVEE
Sbjct: 176 WAKRVEE 182


>sp|HIS6_PYRFU|IMIDAZOLE glycerol phosphate synthase subunit|Pyrococcus furiosus (strain

Query: 3 WIRRVEE 9
W +RVEE
Sbjct: 156 WAKRVEE 162


>sp|KTHY_METMJ|PROBABLE thymidylate kinase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NWIRRVEE 9
+W+RR+ E
Sbjct: 109 SWLRRIHE 116


>sp|Y711_METJA|UNCHARACTERIZED protein MJ0711|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WIRRVEE 9
WI+RVE+
Sbjct: 272 WIKRVEK 278


>sp|HIS6_THEKO|IMIDAZOLE glycerol phosphate synthase subunit|Thermococcus kodakarensis

Query: 3 WIRRVEE 9
W R+VEE
Sbjct: 156 WARKVEE 162


>sp|GATB_METMP|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus maripaludis (strain DSM

Query: 2 NWIRRVE 8
NW+ +VE
Sbjct: 272 NWVEKVE 278


>sp|GATB_METVS|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus vannielii (strain ATCC

Query: 2 NWIRRVE 8
+WI RVE
Sbjct: 272 SWIERVE 278


>sp|GATB_META3|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanococcus aeolicus (strain ATCC

Query: 1 RNWIRRVEE 9
+ W++ VEE
Sbjct: 271 KEWVKTVEE 279


>sp|AAT_THEKO|ASPARTATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 WIRRVEE 9
WI RVEE
Sbjct: 124 WIPRVEE 130


>sp|FEN_CALMQ|FLAP endonuclease 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 NWIRRVEE 9
+WI+ VEE
Sbjct: 108 DWIKAVEE 115




32|SequenceR|165|156|WLPIARNWIR

>sp|DP2L_HALSA|DNA polymerase II large subunit|Halobacterium salinarum (strain ATCC

Query: 1 WLPIARN 7
WLP+AR+
Sbjct: 566 WLPLARS 572


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 2 LPIARNWI 9
+P++R WI
Sbjct: 187 IPVSRAWI 194


>sp|MAP2_ARCFU|METHIONINE aminopeptidase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPIARNWIR 10
LP A+ W++
Sbjct: 234 LPFAKRWLK 242


>sp|MAP2_METJA|METHIONINE aminopeptidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WLPIARNWI 9
+LP A W+
Sbjct: 234 YLPFAERWV 242


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPIARNWIR 10
L ARNW++
Sbjct: 210 LNYARNWVK 218


>sp|ARGB_METM6|ACETYLGLUTAMATE kinase|Methanococcus maripaludis (strain C6 /

Query: 5 ARNWI 9
ARNWI
Sbjct: 39 ARNWI 43


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 WL---PIARNW 8
WL P+A NW
Sbjct: 187 WLGAEPVATNW 197


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 WL---PIARNW 8
WL P+A NW
Sbjct: 194 WLGAEPVATNW 204


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 WL---PIARNW 8
WL P+A NW
Sbjct: 194 WLGAEPVATNW 204


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 LPIARNWI 9
LP NWI
Sbjct: 523 LPFDENWI 530


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LPIARNWI 9
LP NWI
Sbjct: 523 LPFDENWI 530


>sp|UREND_METTH|DNA uridine endonuclease|Methanothermobacter thermautotrophicus (strain

Query: 1 WLPIARNWI 9
+LP+ R WI
Sbjct: 173 FLPVERAWI 181


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 LPIARNWI 9
LP NWI
Sbjct: 523 LPFDENWI 530


>sp|GPMA_METHJ|2,3-BISPHOSPHOGLYCERATE-DEPENDENT phosphoglycerate mutase|Methanospirillum hungatei JF-1 (strain

Query: 1 WLPIARNW 8
W+P+ R W
Sbjct: 76 WIPVIRTW 83


>sp|SYK_PYRHO|LYSINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IARNWIR 10
+ARNW++
Sbjct: 416 LARNWVK 422


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 WLPIARNW 8
W+P+ W
Sbjct: 126 WVPLEEEW 133


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 WLPIARNW 8
W+P+ W
Sbjct: 126 WVPLEEEW 133




33|SequenceR|170|161|QDPLEWLPIA

>sp|AROA_METMJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 3 PLEWLP 8
PLEWLP
Sbjct: 62 PLEWLP 67


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 3 PLEWLPI 9
P EWLPI
Sbjct: 498 PNEWLPI 504


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 3 PLEWLPI 9
P EWLPI
Sbjct: 858 PNEWLPI 864


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PLEWLPI 9
P EWLP+
Sbjct: 855 PEEWLPV 861


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 PLEWLPI 9
P EWLPI
Sbjct: 496 PDEWLPI 502


>sp|UPPP_SULTO|UNDECAPRENYL-DIPHOSPHATASE tokodaii (strain DSM 16993

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 17 EWLPIS 22


>sp|UPPP_SACI7|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain Y.G.57.14 /

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 17 EWLPIS 22


>sp|UPPP_SACI1|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain Y.N.15.51 /

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 17 EWLPIS 22


>sp|UPPP_PYRIL|UNDECAPRENYL-DIPHOSPHATASE islandicum (strain DSM 4184

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 17 EWLPIS 22


>sp|UPPP_PYRAE|UNDECAPRENYL-DIPHOSPHATASE aerophilum (strain ATCC 51768

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 17 EWLPIS 22


>sp|UPPP_METBU|UNDECAPRENYL-DIPHOSPHATASE burtonii (strain DSM 6242

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 18 EWLPIS 23


>sp|RL2_STAMF|LARGE ribosomal subunit protein uL2|Staphylothermus marinus (strain

Query: 1 QDPLEWLPIA 10
DP W+P+A
Sbjct: 48 HDPGRWVPLA 57


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 PLEWLPI 9
P EWLP+
Sbjct: 495 PDEWLPL 501


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 4 LEWLPI 9
LEW+PI
Sbjct: 5 LEWMPI 10


>sp|RL2_IGNH4|LARGE ribosomal subunit protein uL2|Ignicoccus hospitalis (strain

Query: 1 QDPLEWLPIA 10
DP W+P+A
Sbjct: 51 HDPGRWVPLA 60


>sp|UPPP_HALMA|UNDECAPRENYL-DIPHOSPHATASE marismortui (strain ATCC 43049

Query: 1 QDPLEWLPIA 10
Q LEW+P++
Sbjct: 14 QGVLEWIPVS 23


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 3 PLEWLP 8
PLEW P
Sbjct: 244 PLEWHP 249


>sp|RL2_DESA1|LARGE ribosomal subunit protein uL2|Desulfurococcus amylolyticus

Query: 1 QDPLEWLPIA 10
DP W+P+A
Sbjct: 48 HDPGRWVPLA 57


>sp|UPPP_KORCO|UNDECAPRENYL-DIPHOSPHATASE cryptofilum (strain OPF8)

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 17 EWLPIS 22


>sp|RS12_STAMF|SMALL ribosomal subunit protein uS12|Staphylothermus marinus (strain

Query: 1 QDPLEWLPIA 10
DPLE P+A
Sbjct: 41 HDPLEGAPMA 50


>sp|RS12_SULTO|SMALL ribosomal subunit protein uS12|Sulfurisphaera tokodaii (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|RS12_SULAC|SMALL ribosomal subunit protein uS12|Sulfolobus acidocaldarius (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|RS12_NANEQ|SMALL ribosomal subunit protein uS12|Nanoarchaeum equitans (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 38 DPLEGAPMA 46


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|RS12_IGNH4|SMALL ribosomal subunit protein uS12|Ignicoccus hospitalis (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|RS12_HYPBU|SMALL ribosomal subunit protein uS12|Hyperthermus butylicus (strain DSM

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 37 DPLEGAPMA 45


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 2 DPLEWLPI 9
D L W+PI
Sbjct: 148 DSLTWIPI 155


>sp|UPPP_METTP|UNDECAPRENYL-DIPHOSPHATASE thermoacetophila (strain DSM 6194

Query: 5 EWLPIA 10
EWLP++
Sbjct: 17 EWLPVS 22


>sp|DPOL_THEHY|DNA polymerase|Thermococcus hydrothermalis

Query: 3 PLEWLPI 9
P EW+P+
Sbjct: 462 PEEWIPL 468


>sp|RS12_AERPE|SMALL ribosomal subunit protein uS12|Aeropyrum pernix (strain ATCC

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|Y456_METJA|UNCHARACTERIZED transporter MJ0456|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WLPIA 10
WLPIA
Sbjct: 291 WLPIA 295


>sp|RL2_HYPBU|LARGE ribosomal subunit protein uL2|Hyperthermus butylicus (strain DSM

Query: 1 QDPLEWLPIA 10
DP W+P+A
Sbjct: 47 HDPGRWVPLA 56


>sp|RS12_METLZ|SMALL ribosomal subunit protein uS12|Methanocorpusculum labreanum

Query: 2 DPLEWLPIA 10
DPLE PI
Sbjct: 37 DPLEGAPIG 45


>sp|UPPP_SACS2|UNDECAPRENYL-DIPHOSPHATASE solfataricus (strain ATCC 35092

Query: 5 EWLPIA 10
EW+PI+
Sbjct: 18 EWIPIS 23


>sp|UPPP_SACI6|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.16.4 /

Query: 5 EWLPIA 10
EW+PI+
Sbjct: 18 EWIPIS 23


>sp|UPPP_SACI4|UNDECAPRENYL-DIPHOSPHATASE islandicus (strain M.14.25 /

Query: 5 EWLPIA 10
EW+PI+
Sbjct: 18 EWIPIS 23


>sp|NUCS_METTH|ENDONUCLEASE NucS|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 DPLEWLP 8
DP+ W P
Sbjct: 73 DPVNWQP 79


>sp|AGL9_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl9|Haloferax volcanii

Query: 2 DPLEWLPIA 10
+PL+WL ++
Sbjct: 90 NPLKWLSLS 98


>sp|RS12_PYRCJ|SMALL ribosomal subunit protein uS12|Pyrobaculum calidifontis (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|KTHY_METMA|PROBABLE thymidylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 QDPLEWL 7
++PLEW+
Sbjct: 111 ENPLEWV 117


>sp|RS12_PYRAE|SMALL ribosomal subunit protein uS12|Pyrobaculum aerophilum (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|KTHY_METBF|PROBABLE thymidylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 QDPLEWL 7
++PLEW+
Sbjct: 111 ENPLEWV 117


>sp|AOCD_ARCFU|ORNITHINE cyclodeaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EWLPI 9
EWLP+
Sbjct: 111 EWLPV 115


>sp|GCST_AERPE|PROBABLE aminomethyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 QDPLEW 6
+DPL W
Sbjct: 248 EDPLRW 253


>sp|UPPP_METKA|UNDECAPRENYL-DIPHOSPHATASE kandleri (strain AV19 /

Query: 5 EWLPIA 10
EWLPI+
Sbjct: 20 EWLPIS 25


>sp|KTHY_METS3|PROBABLE thymidylate kinase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 QDPLEWL 7
Q+P EW+
Sbjct: 99 QEPAEWI 105


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QDPLEWLPI 9
Q ++WLPI
Sbjct: 209 QMAVDWLPI 217


>sp|NUCS_SACS2|ENDONUCLEASE NucS|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 QDPLEWLP 8
++PL W P
Sbjct: 67 REPLNWQP 74


>sp|NUCS_SACI7|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 QDPLEWLP 8
++PL W P
Sbjct: 67 REPLNWQP 74


>sp|NUCS_SACI4|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.14.25 /

Query: 1 QDPLEWLP 8
++PL W P
Sbjct: 67 REPLNWQP 74


>sp|NUCS_SACI3|ENDONUCLEASE NucS|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 QDPLEWLP 8
++PL W P
Sbjct: 67 REPLNWQP 74


>sp|NUCS_SACI2|ENDONUCLEASE NucS|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 QDPLEWLP 8
++PL W P
Sbjct: 67 REPLNWQP 74


>sp|NUCS_SACI1|ENDONUCLEASE NucS|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 QDPLEWLP 8
++PL W P
Sbjct: 67 REPLNWQP 74


>sp|RS12_PYRAR|SMALL ribosomal subunit protein uS12|Pyrobaculum arsenaticum (strain

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|MTD_METTM|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanothermobacter

Query: 1 QDPLEWLPI 9
QDP +++PI
Sbjct: 218 QDPDQYIPI 226


>sp|RS12_PYRIL|SMALL ribosomal subunit protein uS12|Pyrobaculum islandicum (strain DSM

Query: 2 DPLEWLPIA 10
DPLE P+A
Sbjct: 42 DPLEGAPMA 50


>sp|IF2A_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 PLEWLPI 9
P EWLP+
Sbjct: 156 PDEWLPV 162


>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QDPLEWL 7
++P+EW+
Sbjct: 108 EEPMEWI 114


>sp|IF2A_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 PLEWLPI 9
P EWLP+
Sbjct: 156 PDEWLPV 162


>sp|IF2A_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PLEWLPI 9
P EWLP+
Sbjct: 156 PDEWLPV 162


>sp|MTD_METTH|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanothermobacter

Query: 1 QDPLEWLPI 9
QDP +++PI
Sbjct: 218 QDPDKYIPI 226


>sp|TRPB2_METMA|TRYPTOPHAN synthase beta chain 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DPLEWLPI 9
DP W PI
Sbjct: 43 DPRTWQPI 50




34|SequenceR|175|166|LQVEEQDPLE

>sp|TMCA1_SACS2|TRNA(MET) cytidine acetyltransferase TmcA 1|Saccharolobus solfataricus

Query: 3 VEEQDPLE 10
+E QDPLE
Sbjct: 36 IESQDPLE 43


>sp|MTNA_METTH|PUTATIVE methylthioribose-1-phosphate isomerase|Methanothermobacter

Query: 1 LQVEEQDPLE 10
+++EE+DP E
Sbjct: 260 IEIEERDPAE 269


>sp|HTPX1_SACS2|PROTEASE HtpX homolog 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LQVEEQDP 8
++VEE+DP
Sbjct: 263 VKVEEKDP 270


>sp|MCRB_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain

Query: 3 VEEQDPLE 10
VEEQ PLE
Sbjct: 18 VEEQVPLE 25


>sp|MCRB_METTH|METHYL-COENZYME M reductase I subunit|Methanothermobacter thermautotrophicus

Query: 3 VEEQDPLE 10
VEEQ PLE
Sbjct: 18 VEEQVPLE 25


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 3 VEEQDPLE 10
VEEQ P+E
Sbjct: 18 VEEQVPIE 25




35|SequenceR|180|171|FMTDALQVEE

>sp|FDHD_PICTO|SULFUR carrier protein FdhD|Picrophilus torridus (strain ATCC 700027

Query: 1 FMTDALQVEE 10
F+TD + VEE
Sbjct: 18 FITDNVTVEE 27




36|SequenceR|185|176|VKTLGFMTDA

>sp|RS13_HYPBU|SMALL ribosomal subunit protein uS13|Hyperthermus butylicus (strain DSM

Query: 2 KTLGFMTDA 10
K +GF+TDA
Sbjct: 52 KRIGFLTDA 60


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 VKTLGFMTD 9
+KTLG+ TD
Sbjct: 345 LKTLGYPTD 353


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 VKTLGFMTD 9
++ LGF+TD
Sbjct: 225 MRALGFVTD 233


>sp|MUTL_METMJ|DNA mismatch repair protein MutL|Methanoculleus marisnigri (strain ATCC

Query: 1 VKTLGFMTDA 10
V+TLGF +A
Sbjct: 92 VRTLGFRGEA 101


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 3 TLGFMTD 9
TLGF+T+
Sbjct: 90 TLGFLTE 96


>sp|NADK_THEGJ|NAD kinase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 TLGFMTD 9
TLGF+T+
Sbjct: 90 TLGFLTE 96


>sp|MUTL_METTP|DNA mismatch repair protein MutL|Methanothrix thermoacetophila

Query: 1 VKTLGFMTDA 10
+KTLGF +A
Sbjct: 90 LKTLGFRGEA 99


>sp|COXX_HYPBU|PROTOHEME IX farnesyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 VKTLGFMTDA 10
V TLGF+T A
Sbjct: 49 VLTLGFITIA 58


>sp|NADK_PYRHO|NAD kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 TLGFMTD 9
TLGF+T+
Sbjct: 90 TLGFLTE 96


>sp|NADK_PYRFU|NAD kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 TLGFMTD 9
TLGF+T+
Sbjct: 90 TLGFLTE 96


>sp|NADK_THEON|NAD kinase|Thermococcus onnurineus (strain NA1)

Query: 3 TLGFMTD 9
TLGF+T+
Sbjct: 90 TLGFLTE 96


>sp|PHAE_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloferax mediterranei (strain ATCC 33500

Query: 1 VKTLGFMTDA 10
++TLGF T+
Sbjct: 139 LRTLGFATEG 148




37|SequenceR|190|181|LTDDTVKTLG

>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 LTDDTVKTL 9
LT +TVKTL
Sbjct: 155 LTSETVKTL 163


>sp|COOS2_METMA|CARBON monoxide dehydrogenase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TDDTVKTL 9
TD T++TL
Sbjct: 100 TDQTIRTL 107


>sp|COOS2_METAC|CARBON monoxide dehydrogenase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 TDDTVKTL 9
TD T++TL
Sbjct: 100 TDQTIRTL 107




38|SequenceR|195|186|VSFRKLTDDT

>sp|NTPPA_PYRFU|DTTP/UTP pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VSFRKLTDD 9
V FR+L+DD
Sbjct: 122 VKFRELSDD 130


>sp|IF2A_SACI2|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|IF2A_SACI7|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|IF2A_SACI6|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|IF2A_SACI4|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|IF2A_SACI3|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|IF2A_SACI1|TRANSLATION initiation factor 2 subunit|Saccharolobus islandicus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|IF2A_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain

Query: 1 VSFRKLTDD 9
VS +K+TDD
Sbjct: 80 VSLKKVTDD 88


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VSFRKLTDD 9
+ F+K+TDD
Sbjct: 543 ILFKKVTDD 551


>sp|SYM_THEON|METHIONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 VSFRKLTDD 9
+ FRK+TD+
Sbjct: 544 ILFRKVTDE 552


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 FRKLTDD 9
RKLTDD
Sbjct: 104 LRKLTDD 110


>sp|SYP_METVS|PROLINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FRKLTDDT 10
RKL DDT
Sbjct: 44 LRKLLDDT 51


>sp|PCNA2_AERPE|DNA polymerase sliding clamp 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 VSFRKLTDD 9
VSF LTDD
Sbjct: 135 VSFTILTDD 143




39|SequenceR|200|191|PRLYRVSFRK

>sp|THII_AERPE|PROBABLE tRNA sulfurtransferase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PRLYRVSFR 9
PRLY V+FR
Sbjct: 238 PRLYVVNFR 246


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 PRLYRVSFRK 10
PRL+ +FR+
Sbjct: 81 PRLHEPTFRR 90


>sp|HDRA_METTH|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit

Query: 1 PRLYRVSFRK 10
PRL+ +FR+
Sbjct: 82 PRLHEPTFRR 91


>sp|HDRA2_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 1 PRLYRVSFRK 10
PRL+ +FR+
Sbjct: 75 PRLHEPTFRR 84


>sp|SURE_ARCFU|5'-NUCLEOTIDASE SurE|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RLYRVSFRK 10
R+YRVS K
Sbjct: 190 RMYRVSVEK 198


>sp|SYE_THEAC|GLUTAMATE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 PRLYRVSFRK 10
PR YR SF K
Sbjct: 400 PRAYRFSFVK 409


>sp|RADA_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis (strain

Query: 3 LYRVSFRK 10
LYR+ FRK
Sbjct: 331 LYRILFRK 338


>sp|RL18_CALMQ|LARGE ribosomal subunit protein uL18|Caldivirga maquilingensis (strain

Query: 1 PRLYRVSFRK 10
P LY++ F K
Sbjct: 161 PELYKIRFSK 170




40|SequenceR|205|196|VLSRAPRLYR

>sp|TYW32_PYRAB|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 3 SRAPRLYR 10
SR PRLY+
Sbjct: 174 SRLPRLYK 181


>sp|DAPB_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VLSRAPRLY 9
V+ R PR+Y
Sbjct: 236 VVGREPRIY 244


>sp|KAE1B_METAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 VLSRAPRLYR 10
V R P+LYR
Sbjct: 376 VKERVPKLYR 385


>sp|TOP6B_PYRAB|TYPE 2 DNA topoisomerase 6|Pyrococcus abyssi (strain GE5 /

Query: 2 LSRAPRLY 9
++RAPR+Y
Sbjct: 383 VTRAPRVY 390


>sp|TATCO_HALVD|SEC-INDEPENDENT protein translocase protein TatCo|Haloferax volcanii (strain ATCC

Query: 1 VLSRAPRLY 9
++ R PRLY
Sbjct: 256 IVDRRPRLY 264


>sp|RL18_PYRNV|LARGE ribosomal subunit protein uL18|Pyrobaculum neutrophilum (strain

Query: 1 VLSRAPRL 8
+LSR PRL
Sbjct: 28 ILSRKPRL 35


>sp|Y405_METJA|UNCHARACTERIZED protein MJ0405|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LSRAPRLYR 10
+SR P LY+
Sbjct: 114 ISRRPELYK 122


>sp|TOP6B_AERPE|TYPE 2 DNA topoisomerase 6|Aeropyrum pernix (strain ATCC 700893

Query: 2 LSRAPRLYR 10
+SR+P+ YR
Sbjct: 366 VSRSPKAYR 374


>sp|KAE1B_HALSA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 4 RAPRLYR 10
RAP+ YR
Sbjct: 357 RAPKAYR 363




41|SequenceR|210|201|SFWPFVLSRA

>sp|CBID_META3|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SFWPFVLSRA 10
+FW F+L +A
Sbjct: 252 NFWSFMLDKA 261


>sp|CBID_METVS|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 SFWPFVLSRA 10
+FW F+L +A
Sbjct: 239 NFWGFMLEKA 248


>sp|CBID_METJA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 SFWPFVLSRA 10
+FW F+L +A
Sbjct: 234 NFWGFMLDKA 243


>sp|COSB_HALS3|CHEMOTACTIC signal transduction system substrate-binding|Halobacterium

Query: 1 SFWPF 5
+FWPF
Sbjct: 271 NFWPF 275


>sp|CDPAS_PICTO|CDP-ARCHAEOL synthase|Picrophilus torridus (strain ATCC 700027

Query: 3 WPFVL 7
WPFVL
Sbjct: 128 WPFVL 132


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 2 FWPFVL 7
FW FVL
Sbjct: 536 FWDFVL 541




42|SequenceR|215|206|GSGGPSFWPF

>sp|Y2210_ARCFU|UNCHARACTERIZED protein AF_2210|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GSGGPSFWPF 10
G+G PS+ PF
Sbjct: 45 GAGCPSYCPF 54


>sp|CATA_METBF|CATALASE barkeri (strain Fusaro /

Query: 1 GSGGPSFWP 9
G GP++WP
Sbjct: 381 GGSGPNYWP 389


>sp|AGLC_METVO|DOLICHYL N-acetyl-alpha-D-glucosaminyl phosphate

Query: 2 SGGPSFW 8
SGG SFW
Sbjct: 148 SGGSSFW 154


>sp|ACDA1_METTE|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 1 GSGGPSFWP 9
G GPS WP
Sbjct: 40 GPMGPSAWP 48


>sp|LYSK_PYRAE|PUTATIVE [LysW]-lysine/[LysW]-ornithine hydrolase|Pyrobaculum aerophilum

Query: 1 GSGGPSFW 8
GSGGP W
Sbjct: 51 GSGGPVVW 58


>sp|RS4E_IGNH4|SMALL ribosomal subunit protein eS4|Ignicoccus hospitalis (strain

Query: 3 GGPSFWP 9
P+FWP
Sbjct: 15 AAPAFWP 21


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain

Query: 4 GPSFWP 9
P FWP
Sbjct: 15 APKFWP 20


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 3 GGPSFW 8
G PS+W
Sbjct: 335 GSPSYW 340


>sp|RS6E_SULTO|SMALL ribosomal subunit protein eS6|Sulfurisphaera tokodaii (strain DSM

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 177 SGPPGFYP 184


>sp|RS6E_SACS2|SMALL ribosomal subunit protein eS6|Saccharolobus solfataricus (strain

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 178 SGPPGFYP 185


>sp|RS6E_SACI7|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 178 SGPPGFYP 185


>sp|RS6E_SACI6|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 178 SGPPGFYP 185


>sp|RS6E_SACI4|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 178 SGPPGFYP 185


>sp|RS6E_SACI3|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 178 SGPPGFYP 185


>sp|RS6E_SACI2|SMALL ribosomal subunit protein eS6|Saccharolobus islandicus (strain

Query: 2 SGGPSFWP 9
SG P F+P
Sbjct: 178 SGPPGFYP 185


>sp|MSRB_METTH|PEPTIDE methionine sulfoxide reductase MsrB|Methanothermobacter

Query: 1 GSGGPSFW 8
G+G PSF+
Sbjct: 81 GTGWPSFY 88


>sp|NADB_SACS2|L-ASPARTATE oxidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 SGGPSFW 8
+GG S+W
Sbjct: 33 NGGSSYW 39


>sp|RS4E_AERPE|SMALL ribosomal subunit protein eS4|Aeropyrum pernix (strain ATCC

Query: 3 GGPSFWP 9
P FWP
Sbjct: 14 AAPRFWP 20


>sp|RS4E_HYPBU|SMALL ribosomal subunit protein eS4|Hyperthermus butylicus (strain DSM

Query: 3 GGPSFWP 9
P FWP
Sbjct: 14 AAPKFWP 20


>sp|MSRB_METBF|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina barkeri

Query: 1 GSGGPSFW 8
G+G PSF+
Sbjct: 66 GTGWPSFY 73


>sp|MSRB_METMA|PEPTIDE methionine sulfoxide reductase MsrB|Methanosarcina mazei (strain

Query: 1 GSGGPSFW 8
G+G PSF+
Sbjct: 66 GTGWPSFY 73


>sp|FRHD_METTH|COENZYME F420 hydrogenase subunit delta|Methanothermobacter

Query: 1 GSGGPSF 7
G+GGP F
Sbjct: 49 GTGGPHF 55


>sp|CYAS_METBF|CYSTEATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 GSGGPSFW 8
G+GG S W
Sbjct: 235 GTGGISVW 242


>sp|ULIL_METAC|ULILYSIN acetivorans (strain ATCC 35395

Query: 2 SGGPSFWP 9
SGG WP
Sbjct: 159 SGGEDAWP 166


>sp|PIMT_KORCO|PROTEIN-L-ISOASPARTATE O-methyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 3 GGPSFW 8
G P FW
Sbjct: 182 GSPGFW 187




43|SequenceR|220|211|KLGRLGSGGP

>sp|RNH2_METTH|RIBONUCLEASE HII|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KLGRLGSGGP 10
KLG +GSG P
Sbjct: 164 KLGDIGSGYP 173


>sp|RNH2_METS3|RIBONUCLEASE HII|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 KLGRLGSGGP 10
K+G +GSG P
Sbjct: 163 KMGGIGSGYP 172


>sp|PYRI_PYRAB|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus abyssi (strain

Query: 1 KLGRLGSGG 9
KLG+L +GG
Sbjct: 31 KLGKLTNGG 39


>sp|DAPB_METM7|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C7 /

Query: 2 LGRLGSG 8
LGR+GSG
Sbjct: 10 LGRMGSG 16


>sp|DAPB_METM6|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C6 /

Query: 2 LGRLGSG 8
LGR+GSG
Sbjct: 10 LGRMGSG 16


>sp|DAPB_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain C5 /

Query: 2 LGRLGSG 8
LGR+GSG
Sbjct: 10 LGRMGSG 16


>sp|DAPB_METMP|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus maripaludis (strain DSM 14266

Query: 2 LGRLGSG 8
LGR+GSG
Sbjct: 10 LGRMGSG 16


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KLGRLGSGGP 10
KLG + GGP
Sbjct: 32 KLGMVAFGGP 41


>sp|NTPTH_PYRCJ|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LGRLGSGGP 10
L R+G+G P
Sbjct: 69 LARVGTGSP 77


>sp|DAPB_METVS|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 2 LGRLGSG 8
LGR+GSG
Sbjct: 10 LGRMGSG 16


>sp|TOP6A_THEKO|TYPE 2 DNA topoisomerase 6|Thermococcus kodakarensis (strain ATCC

Query: 4 RLGSGG 9
RLGSGG
Sbjct: 176 RLGSGG 181


>sp|FDHA_METFO|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanobacterium formicicum

Query: 2 LGRLGSG 8
+GRLG+G
Sbjct: 314 IGRLGTG 320


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KLGRLGSG 8
+LG LGSG
Sbjct: 682 QLGSLGSG 689


>sp|KCY_METTP|CYTIDYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KLGRLGSGGP 10
+LGRL GP
Sbjct: 48 ELGRLAEQGP 57


>sp|PSB1_STAMF|PROTEASOME subunit beta 1|Staphylothermus marinus (strain ATCC 43588

Query: 5 LGSGGP 10
LGSGGP
Sbjct: 145 LGSGGP 150


>sp|RTCB_METMP|TRNA-SPLICING ligase RtcB|Methanococcus maripaludis (strain DSM 14266

Query: 1 KLGRLGSG 8
+LG LGSG
Sbjct: 194 QLGSLGSG 201


>sp|PSB1_SULAC|PROTEASOME subunit beta 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KLGRLGSGG 9
KLGR G G
Sbjct: 41 KLGRFGIAG 49


>sp|FOLD_METMJ|BIFUNCTIONAL protein FolD|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LGRLGSGGP 10
LGRL SG P
Sbjct: 121 LGRLFSGTP 129


>sp|HACA_METAC|PROBABLE methanogen homoaconitase large subunit|Methanosarcina acetivorans

Query: 3 GRLGSGG 9
GR+G GG
Sbjct: 393 GRMGKGG 399


>sp|SYG_AERPE|GLYCINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KLGRLGSG 8
+LGR+G G
Sbjct: 389 ELGRMGEG 396




44|SequenceR|225|216|KAELLKLGRL

>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 KAELLKLG 8
KAE+LK+G
Sbjct: 167 KAEILKIG 174


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 2 AELLKLGR 9
AEL++LGR
Sbjct: 268 AELIELGR 275


>sp|Y474_PYRAB|UPF0292 protein PYRAB04740|Pyrococcus abyssi (strain GE5 /

Query: 1 KAELLKLGRL 10
+AE++KL RL
Sbjct: 40 RAEIIKLSRL 49


>sp|Y1700_PYRHO|UPF0292 protein PH1700|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KAELLKLGRL 10
+AE++KL RL
Sbjct: 40 RAEIIKLSRL 49


>sp|THIC_THEGJ|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AELLKLGRL 10
AEL LGRL
Sbjct: 243 AELYTLGRL 251


>sp|THIC_THEKO|PHOSPHOMETHYLPYRIMIDINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AELLKLGRL 10
AEL LGRL
Sbjct: 243 AELYTLGRL 251


>sp|THIC_PYRAB|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 AELLKLGRL 10
AEL LGRL
Sbjct: 243 AELYTLGRL 251


>sp|SYR_IGNH4|ARGININE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 4 LLKLGRL 10
LLKLGRL
Sbjct: 178 LLKLGRL 184


>sp|PYRI_PYRAB|ASPARTATE carbamoyltransferase regulatory chain|Pyrococcus abyssi (strain

Query: 3 ELLKLGRL 10
E+LKLG+L
Sbjct: 28 EILKLGKL 35


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 KAELLKLGRL 10
+ E+LKLG L
Sbjct: 953 QKEILKLGHL 962




45|SequenceR|230|221|GDGQCKAELL

>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GQCKAELL 10
GQCK EL+
Sbjct: 332 GQCKRELI 339


>sp|RL31_METPE|LARGE ribosomal subunit protein eL31|Methanosphaerula palustris (strain

Query: 2 DGQCKAEL 9
DGQ +AEL
Sbjct: 77 DGQVQAEL 84


>sp|RL31_METMJ|LARGE ribosomal subunit protein eL31|Methanoculleus marisnigri (strain

Query: 2 DGQCKAEL 9
DGQ +AEL
Sbjct: 77 DGQVQAEL 84


>sp|RL31_METLZ|LARGE ribosomal subunit protein eL31|Methanocorpusculum labreanum

Query: 2 DGQCKAEL 9
DGQ +AEL
Sbjct: 77 DGQVQAEL 84


>sp|RL31_METB6|LARGE ribosomal subunit protein eL31|Methanoregula boonei (strain DSM

Query: 2 DGQCKAEL 9
DGQ +AEL
Sbjct: 77 DGQVQAEL 84


>sp|GVPE_HALMT|TRANSCRIPTIONAL activator GvpE|Haloferax mediterranei (strain ATCC 33500

Query: 2 DGQCKAELL 10
DG C ELL
Sbjct: 96 DGACGKELL 104


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 1 GDGQCKAELL 10
G+G KAE++
Sbjct: 29 GEGNSKAEIM 38


>sp|FLAB2_METVS|FLAGELLIN B2|Methanococcus vannielii (strain ATCC 35089

Query: 1 GDGQCKA 7
DG CKA
Sbjct: 156 ADGSCKA 162


>sp|MPTE_METJA|6-HYDROXYMETHYL-7,8-DIHYDROPTERIN pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GDGQCKAEL 9
DG CKA L
Sbjct: 86 ADGACKAFL 94


>sp|GVPE1_HALSA|TRANSCRIPTIONAL activator GvpE1|Halobacterium salinarum (strain ATCC 700922

Query: 2 DGQCKAELL 10
DG C ELL
Sbjct: 96 DGACGKELL 104




46|SequenceR|235|226|EEYSVGDGQC

>sp|MPGP_PYRFU|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EEYSVGDGQ 9
E Y+VGDG+
Sbjct: 198 ESYAVGDGE 206


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 1 EEYSVGDGQC 10
EEY GD C
Sbjct: 203 EEYVAGDIYC 212


>sp|Y978_META3|UPF0285 protein Maeo_0978|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 60 YSMGDG 65


>sp|Y642_METMP|UPF0285 protein MMP0642|Methanococcus maripaludis (strain DSM 14266

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 59 YSMGDG 64


>sp|NTPTH_METS5|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Metallosphaera sedula (strain ATCC 51363

Query: 5 VGDGQC 10
+GDG C
Sbjct: 62 IGDGSC 67


>sp|MPGP_PYRAB|MANNOSYL-3-PHOSPHOGLYCERATE phosphatase|Pyrococcus abyssi (strain GE5 /

Query: 3 YSVGDG 8
Y+VGDG
Sbjct: 200 YAVGDG 205


>sp|PSB_METPS|PROTEASOME subunit beta|Methanocella paludicola (strain DSM 17711

Query: 4 SVGDGQ 9
SVGDGQ
Sbjct: 56 SVGDGQ 61


>sp|PSB_METAR|PROTEASOME subunit beta|Methanocella arvoryzae (strain DSM 22066

Query: 4 SVGDGQ 9
SVGDGQ
Sbjct: 57 SVGDGQ 62


>sp|Y962_METM5|UPF0285 protein MmarC5_0962|Methanococcus maripaludis (strain C5 /

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 59 YSMGDG 64


>sp|Y247_METM6|UPF0285 protein MmarC6_0247|Methanococcus maripaludis (strain C6 /

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 59 YSMGDG 64


>sp|Y1666_METM7|UPF0285 protein MmarC7_1666|Methanococcus maripaludis (strain C7 /

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 59 YSMGDG 64


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 63 YSMGDG 68


>sp|Y208_METBF|UPF0285 protein Mbar_A0208|Methanosarcina barkeri (strain Fusaro /

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 63 YSMGDG 68


>sp|Y1551_METVS|UPF0285 protein Mevan_1551|Methanococcus vannielii (strain ATCC 35089

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 59 YSMGDG 64


>sp|Y1370_METJA|UPF0285 protein MJ1370|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 58 YSMGDG 63


>sp|CSL4_SACS2|EXOSOME complex component Csl4|Saccharolobus solfataricus (strain ATCC

Query: 1 EEYSVGDG 8
EE+ GDG
Sbjct: 18 EEFMTGDG 25


>sp|Y679_METMA|UPF0285 protein MM_0679|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 YSVGDG 8
YS+GDG
Sbjct: 63 YSMGDG 68


>sp|TKTN_METJA|PUTATIVE transketolase N-terminal section|Methanocaldococcus jannaschii

Query: 5 VGDGQC 10
+GDG+C
Sbjct: 147 LGDGEC 152




47|SequenceR|240|231|RPITTEEYSV

>sp|METXA_HALSA|HOMOSERINE O-acetyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RPITTEEYSV 10
RPI T EY V
Sbjct: 68 RPIDTTEYFV 77


>sp|CBID_THEVO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 PITTEEYSV 10
P++TEEY +
Sbjct: 189 PVSTEEYEL 197


>sp|PORB_PYRFU|PYRUVATE synthase subunit PorB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 PITTEEY 8
PITT EY
Sbjct: 7 PITTREY 13


>sp|PORB_PYRHO|PYRUVATE synthase subunit PorB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PITTEEY 8
PITT EY
Sbjct: 7 PITTREY 13


>sp|PORB_PYRAB|PYRUVATE synthase subunit PorB|Pyrococcus abyssi (strain GE5 /

Query: 2 PITTEEY 8
PITT EY
Sbjct: 7 PITTREY 13


>sp|SYFB_METS5|PHENYLALANINE--TRNA ligase beta subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 PITTEEYSV 10
P++ +EYS+
Sbjct: 35 PVSQDEYSI 43


>sp|CBID_METTH|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanothermobacter thermautotrophicus

Query: 1 RPITTEEY 8
RP++TE Y
Sbjct: 174 RPMSTEAY 181


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 PITTEEYS 9
PITT++Y+
Sbjct: 53 PITTKKYT 60


>sp|UVRB_HALMA|UVRABC system protein B|Haloarcula marismortui (strain ATCC 43049

Query: 1 RPITTEEY 8
RP+T EE+
Sbjct: 388 RPLTFEEF 395




48|SequenceR|245|236|HYASPRPITT

>sp|Y3528_METJA|UNCHARACTERIZED protein MJECL28|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YASPRPITT 10
Y SPRP T
Sbjct: 263 YGSPRPCVT 271


>sp|KDGK1_HALVD|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE volcanii (strain ATCC 29605

Query: 1 HYASPRP 7
H ASPRP
Sbjct: 96 HGASPRP 102


>sp|ADEC_METST|ADENINE deaminase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 ASPRPITT 10
A+PRPI T
Sbjct: 325 ANPRPIDT 332


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 1 HYASPRP 7
HY +P P
Sbjct: 56 HYGAPNP 62


>sp|NCPP_PYRAE|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum aerophilum (strain

Query: 4 SPRPITT 10
+PRP+TT
Sbjct: 32 APRPLTT 38


>sp|DTDA_PYRAR|D-AMINOACYL-TRNA deacylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 ASPRPITT 10
A+PRPI T
Sbjct: 74 ANPRPIFT 81




49|SequenceR|250|241|LGFLNHYASP

>sp|MBHLB_PYRFU|MEMBRANE-BOUND hydrogenase subunit beta|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LGFLNH 6
LGFLNH
Sbjct: 69 LGFLNH 74


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 1 LGFLNHYA 8
+ FLNHY+
Sbjct: 137 ISFLNHYS 144


>sp|PUR1_PYRHO|AMIDOPHOSPHORIBOSYLTRANSFERASE horikoshii (strain ATCC 700860

Query: 1 LGFLNHYA 8
+ FLNHY+
Sbjct: 137 VSFLNHYS 144


>sp|DAPA_HALMA|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 GFLNHYAS 9
GF++HY +
Sbjct: 117 GFIDHYTT 124


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 2 GFLNHYASP 10
GFLN A P
Sbjct: 189 GFLNTVADP 197


>sp|MPTN_METJA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGFLNHY 7
L +LNHY
Sbjct: 75 LKYLNHY 81


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 1 LGFLNHYA 8
+GF++HY
Sbjct: 146 IGFVHHYG 153


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 2 GFLNH 6
GFLNH
Sbjct: 50 GFLNH 54


>sp|Y1363_THEAC|PUTATIVE HTH-type transcriptional regulatory protein|Thermoplasma

Query: 1 LGFLNHY 7
+G+L+HY
Sbjct: 144 IGYLSHY 150


>sp|ATGT_META3|TRNA-GUANINE(15) transglycosylase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FLNHYAS 9
++NHY S
Sbjct: 483 YINHYTS 489


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LGFLNHYA 8
+GF+ HY
Sbjct: 146 IGFVRHYG 153


>sp|PELO_METBU|PROTEIN pelota homolog|Methanococcoides burtonii (strain DSM 6242

Query: 1 LGFLNHYA 8
+GF+ HY
Sbjct: 146 IGFVRHYG 153


>sp|PELO_METAC|PROTEIN pelota homolog|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGFLNHYA 8
+GF+ HY
Sbjct: 146 IGFVRHYG 153


>sp|Y058_ARCFU|UPF0113 protein AF_0058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FLNHYA 8
FL+HYA
Sbjct: 26 FLSHYA 31




50|SequenceR|255|246|RSILPLGFLN

>sp|TRUA_PYRCJ|TRNA pseudouridine synthase A|Pyrobaculum calidifontis (strain DSM

Query: 2 SILPLGFLN 10
S LPLG++N
Sbjct: 57 SRLPLGYIN 65


>sp|PURA_THESM|ADENYLOSUCCINATE synthetase|Thermococcus sibiricus (strain DSM 12597

Query: 4 LPLGFLN 10
LP GF+N
Sbjct: 57 LPTGFMN 63




51|SequenceR|260|251|VEADRRSILP

>sp|CAS6_HALMT|CRISPR-ASSOCIATED endoribonuclease Cas6|Haloferax mediterranei (strain ATCC 33500

Query: 2 EADRRSIL 9
E DRRS+L
Sbjct: 61 EGDRRSLL 68


>sp|Y977_METKA|UNCHARACTERIZED glycosyltransferase MK0977|Methanopyrus kandleri (strain AV19 /

Query: 1 VEADRRSI 8
VEADRR I
Sbjct: 70 VEADRRVI 77


>sp|Y2021_HALSA|PUTATIVE heme-binding protein VNG_2021C|Halobacterium salinarum (strain ATCC

Query: 2 EADRRSIL 9
EADRR+++
Sbjct: 362 EADRRAVV 369


>sp|UREE_NATPD|UREASE accessory protein UreE|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VEADRRSI 8
VEADRR I
Sbjct: 128 VEADRRII 135




52|SequenceR|265|256|RSTLVVEADR

>sp|ILVH_ARCFU|PROBABLE acetolactate synthase small subunit|Archaeoglobus fulgidus

Query: 1 RSTLVVEAD 9
R T+VVE D
Sbjct: 45 RMTIVVEGD 53




53|SequenceR|270|261|LSDLERSTLV

>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 SDLERSTLV 10
+D+ER+T+V
Sbjct: 67 ADIERATIV 75




54|SequenceR|275|266|SQNLALSDLE

>sp|DHYS_SACI7|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 QNLALSDLE 10
+++ALSDLE
Sbjct: 13 EDIALSDLE 21


>sp|DHYS_SACI4|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QNLALSDLE 10
+++ALSDLE
Sbjct: 13 EDIALSDLE 21


>sp|DHYS_SACI3|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain M.16.27)

Query: 2 QNLALSDLE 10
+++ALSDLE
Sbjct: 13 EDIALSDLE 21


>sp|DHYS_SACI2|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 QNLALSDLE 10
+++ALSDLE
Sbjct: 13 EDIALSDLE 21


>sp|DHYS_SACI1|PROBABLE deoxyhypusine synthase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 QNLALSDLE 10
+++ALSDLE
Sbjct: 13 EDIALSDLE 21


>sp|SYS_NITMS|SERINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 SQNLALSDLE 10
S+NL L DLE
Sbjct: 143 SENLDLVDLE 152




55|SequenceR|280|271|TPLGTSQNLA

>sp|Y456_METJA|UNCHARACTERIZED transporter MJ0456|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TPLGTSQNL 9
TP+G QNL
Sbjct: 131 TPIGNPQNL 139




56|SequenceR|285|276|RPLTLTPLGT

>sp|DPCKG_METBF|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 RPLTLTPLGT 10
RPL PLGT
Sbjct: 12 RPLMKKPLGT 21


>sp|AMPPA_THEGJ|AMP phosphorylase|Thermococcus gammatolerans (strain DSM 15229

Query: 3 LTLTPLGT 10
+TLTP+GT
Sbjct: 77 VTLTPVGT 84


>sp|PUR2_THEKO|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 RPLTLTPLG 9
RP+ + PLG
Sbjct: 139 RPVVVKPLG 147


>sp|RS3A_METLZ|SMALL ribosomal subunit protein eS1|Methanocorpusculum labreanum (strain

Query: 3 LTLTPLGT 10
+T+TPLG+
Sbjct: 109 ITVTPLGS 116


>sp|DPCKG_METAC|GTP-DEPENDENT dephospho-CoA kinase|Methanosarcina acetivorans (strain ATCC

Query: 1 RPLTLTPLGT 10
RPL PLGT
Sbjct: 12 RPLMKRPLGT 21


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 PLTLTPLGT 10
P T PLGT
Sbjct: 903 PATYAPLGT 911


>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 PLTLTPLGT 10
P+T TPL T
Sbjct: 25 PVTRTPLHT 33


>sp|THIM_PYRFU|HYDROXYETHYLTHIAZOLE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RPLTLTPLG 9
+PL L P+G
Sbjct: 87 KPLVLDPVG 95


>sp|RFCL_AERPE|REPLICATION factor C large subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 RPLTLT 6
RPLTLT
Sbjct: 167 RPLTLT 172


>sp|Y226_ARCFU|PUTATIVE NADH dehydrogenase/NAD(P)H nitroreductase AF_0226|Archaeoglobus

Query: 1 RPLTLTPLG 9
RP+ + P+G
Sbjct: 141 RPMAIIPIG 149




57|SequenceR|290|281|LCTTGRPLTL

>sp|BSUHB_METTH|FRUCTOSE-1,6-BISPHOSPHATASE/INOSITOL-1-MONOPHOSPHATASE thermautotrophicus (strain ATCC 29096

Query: 1 LCTTGRPLTL 10
L +TGRP+T+
Sbjct: 61 LESTGRPVTI 70


>sp|AROC_SULAC|CHORISMATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 TTGRPLTL 10
TTG PLT+
Sbjct: 75 TTGAPLTI 82


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 TGRPLTL 10
TGRP+TL
Sbjct: 46 TGRPITL 52


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 TGRPLTL 10
TG+PLT+
Sbjct: 63 TGKPLTI 69


>sp|SPSS1_ARCFU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LCTTGR 6
CTTGR
Sbjct: 41 FCTTGR 46


>sp|SDO1_AERPE|RIBOSOME maturation protein SDO1 homolog|Aeropyrum pernix (strain ATCC

Query: 3 TTGRPL 8
TTGRP+
Sbjct: 115 TTGRPI 120


>sp|OFOA2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit alpha|Sulfurisphaera tokodaii (strain DSM

Query: 4 TGRPLT 9
TGRP+T
Sbjct: 598 TGRPIT 603


>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 3 TTGRPLTL 10
TTG+PL +
Sbjct: 127 TTGKPLKI 134


>sp|Y2029_AERPE|UPF0284 protein APE_2029.1|Aeropyrum pernix (strain ATCC 700893

Query: 5 GRPLTL 10
GRPLTL
Sbjct: 65 GRPLTL 70


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 TTGRPLTL 10
TTG P+T+
Sbjct: 75 TTGAPITI 82


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 TTGRPLTL 10
TTG+P T+
Sbjct: 118 TTGKPATV 125




58|SequenceR|295|286|LLAPPLCTTG

>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 LLAPPLCT 8
LLAPPL T
Sbjct: 135 LLAPPLET 142


>sp|RIBL_METBF|FAD synthase|Methanosarcina barkeri (strain Fusaro /

Query: 5 PLCTTG 10
PLC+TG
Sbjct: 123 PLCSTG 128


>sp|CAS4_THETK|CRISPR-ASSOCIATED exonuclease Cas4|Thermoproteus tenax (strain ATCC 35583

Query: 1 LLAPPLCTT 9
+ APPLC T
Sbjct: 64 ITAPPLCGT 72


>sp|RIBL_METMA|FAD synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 PLCTTG 10
PLC+TG
Sbjct: 135 PLCSTG 140


>sp|RIBL_METAC|FAD synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 PLCTTG 10
PLC+TG
Sbjct: 135 PLCSTG 140




59|SequenceR|300|291|QELYPLLAPP

>sp|XPB2_SULTO|DNA 3'-5' translocase XPB2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QELYPLLAPP 10
ELYP+L P
Sbjct: 210 HELYPILVGP 219


>sp|HDRA_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanococcus

Query: 1 QELYPLLAP 9
+EL+P LAP
Sbjct: 519 KELHPKLAP 527


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QELYPLLAP 9
QE+YP+ P
Sbjct: 807 QEMYPVSKP 815


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 QELYPLLAPP 10
++L P L PP
Sbjct: 289 EQLLPFLDPP 298


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 QELYPLLAP 9
+EL+P LAP
Sbjct: 518 KELHPKLAP 526


>sp|SYFA_METM5|PHENYLALANINE--TRNA ligase alpha subunit|Methanococcus maripaludis (strain C5 /

Query: 1 QELYPLLAPP 10
+ELYP A P
Sbjct: 226 EELYPAKAHP 235


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 QELYPLLA 8
QE+Y LLA
Sbjct: 184 QEIYDLLA 191




60|SequenceR|305|296|VIRRFQELYP

>sp|NADA_METJA|QUINOLINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIRRFQELYP 10
+I++++ELYP
Sbjct: 96 IIKKYRELYP 105


>sp|Y85A_METJA|PUTATIVE transposase MJ0856.1|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VIRRFQELYP 10
+I+RF LYP
Sbjct: 79 LIKRFTGLYP 88


>sp|SYI_HALMA|ISOLEUCINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VIRRFQEL 8
VIRR QE+
Sbjct: 985 VIRRIQEM 992


>sp|YHMF_METFE|UNCHARACTERIZED 32.2 kDa protein in|Methanothermus fervidus

Query: 1 VIRRFQELYP 10
V+RR EL+P
Sbjct: 150 VMRRIYELHP 159


>sp|AATD_THEAC|A-TYPE ATP synthase subunit D|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IRRFQELY 9
IRRFQ+L+
Sbjct: 134 IRRFQKLF 141


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 VIRRFQEL 8
VIRR QE+
Sbjct: 977 VIRRIQEM 984


>sp|Y771_ARCFU|UNCHARACTERIZED protein AF_0771|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIRRFQELY 9
+IRRF+E Y
Sbjct: 129 IIRRFKEDY 137


>sp|ADEC_METMA|ADENINE deaminase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RRFQELYP 10
R F+ LYP
Sbjct: 223 RNFETLYP 230


>sp|Y303_PYRFU|UPF0284 protein PF0303|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VIRRFQELY 9
V+R+ +ELY
Sbjct: 318 VVRKVEELY 326


>sp|DNAG_PICTO|DNA primase DnaG|Picrophilus torridus (strain ATCC 700027

Query: 1 VIRRFQELY 9
VI+R +ELY
Sbjct: 119 VIKRAEELY 127


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VIRRFQEL 8
VIRR QE+
Sbjct: 971 VIRRIQEM 978


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VIRRFQEL 8
VIRR QE+
Sbjct: 944 VIRRIQEM 951


>sp|NASD_HALMT|ASSIMILATORY ferredoxin-dependent nitrite reductase|Haloferax mediterranei

Query: 1 VIRRFQELY 9
V+R F ELY
Sbjct: 252 VVRGFVELY 260


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 5 FQELYP 10
FQE+YP
Sbjct: 51 FQEVYP 56


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 5 FQELYP 10
FQE+YP
Sbjct: 51 FQEVYP 56


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 VIRRFQELYP 10
V+R++ E++P
Sbjct: 433 VLRKYLEIFP 442


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 VIRRFQELYP 10
V+R++ E++P
Sbjct: 433 VLRKYLEIFP 442


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 VIRRFQELYP 10
V+R++ E++P
Sbjct: 433 VLRKYLEIFP 442


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 VIRRFQELYP 10
V+R++ E++P
Sbjct: 433 VLRKYLEIFP 442


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 VIRRFQELYP 10
V+R++ E++P
Sbjct: 433 VLRKYLEIFP 442


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 VIRRFQELYP 10
V+R++ E++P
Sbjct: 433 VLRKYLEIFP 442




61|SequenceR|310|301|DGLWFVIRRF

>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 2 GLWFVIRRF 10
G WF+IR F
Sbjct: 216 GQWFLIRSF 224


>sp|SYC_THEON|CYSTEINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 1 DGLWFVIRRF 10
DG++F +R+F
Sbjct: 140 DGVYFEVRKF 149


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DGLWFVIRRF 10
DG++F +R+F
Sbjct: 140 DGVYFEVRKF 149


>sp|MCRA_METTM|METHYL-COENZYME M reductase I subunit|Methanothermobacter marburgensis (strain ATCC

Query: 1 DGLWFVIR 8
DG+W V+R
Sbjct: 202 DGIWQVVR 209


>sp|MCRA_METTH|METHYL-COENZYME M reductase subunit alpha|Methanothermobacter thermautotrophicus

Query: 1 DGLWFVIR 8
DG+W V+R
Sbjct: 202 DGIWQVVR 209


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGLWFVIRRF 10
DG++F +R+F
Sbjct: 140 DGVYFEVRKF 149


>sp|RNP2_METJA|RIBONUCLEASE P protein component 2|Methanocaldococcus jannaschii (strain ATCC

Query: 4 WFVIRR 9
WFVIRR
Sbjct: 120 WFVIRR 125


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DGLWFVIRRF 10
DG++F +R+F
Sbjct: 138 DGVYFEVRKF 147


>sp|ASSY_METKA|ARGININOSUCCINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 DGLWF 5
DGLWF
Sbjct: 311 DGLWF 315


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DGLWF 5
DGLWF
Sbjct: 310 DGLWF 314


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 1 DGLWFVI 7
DGLW +I
Sbjct: 227 DGLWMLI 233


>sp|AROE_THEKO|SHIKIMATE dehydrogenase (NADP(+))|Thermococcus kodakarensis (strain ATCC

Query: 1 DGLWFVI 7
DGLW ++
Sbjct: 236 DGLWMLV 242


>sp|AROE_PYRFU|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGLWFVI 7
DGLW ++
Sbjct: 233 DGLWMLV 239


>sp|Y1329_PYRAE|PUTATIVE esterase PAE1329|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLWFVIRR 9
G W+ +RR
Sbjct: 136 GTWYYLRR 143


>sp|PHSG_THELN|MALTODEXTRIN phosphorylase|Thermococcus litoralis (strain ATCC 51850

Query: 1 DGLWFVIRR 9
+GLW+ + R
Sbjct: 430 EGLWYGVER 438


>sp|Y1574_METJA|UNCHARACTERIZED ATP-dependent helicase MJ1574|Methanocaldococcus jannaschii (strain

Query: 1 DGLWFVIRRF 10
DG++ +I+RF
Sbjct: 358 DGIFSLIQRF 367




62|SequenceR|315|306|WSRLDDGLWF

>sp|GCSH_AERPE|PROBABLE glycine cleavage system H|Aeropyrum pernix (strain ATCC 700893

Query: 1 WSRLDDGL 8
W+RL+DG+
Sbjct: 29 WARLEDGV 36


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 1 WSRLDDGL 8
W RLDD L
Sbjct: 346 WKRLDDHL 353


>sp|Y1357_HALVD|PUTATIVE transcriptional regulator HVO_1357|Haloferax volcanii (strain ATCC

Query: 2 SRLDDGL 8
+RLDDGL
Sbjct: 390 TRLDDGL 396


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans (strain

Query: 1 WSRLDDGLW 9
W+RL LW
Sbjct: 471 WNRLKRELW 479


>sp|DNLI_METTF|DNA ligase|Methanothermobacter thermautotrophicus (Methanobacterium

Query: 4 LDDGLWF 10
LDD LW
Sbjct: 385 LDDALWL 391


>sp|FLAI_SULAC|ARCHAEAL flagellar ATPase motor FlaI|Sulfolobus acidocaldarius (strain ATCC

Query: 1 WSRLDDGL 8
W+ LD+G+
Sbjct: 249 WTMLDEGM 256


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DDGLWF 10
DDGL+F
Sbjct: 328 DDGLYF 333


>sp|NPD2_ARCFU|NAD-DEPENDENT protein deacylase 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RLDDGLW 9
R +DGLW
Sbjct: 36 RGEDGLW 42


>sp|GLMM_METTH|PROBABLE phosphoglucosamine mutase|Methanothermobacter thermautotrophicus

Query: 4 LDDGLW 9
LDDG W
Sbjct: 404 LDDGSW 409


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 WSRLDDGL 8
W++LDD L
Sbjct: 143 WTQLDDVL 150


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WSRLDDGLW 9
W + D+G W
Sbjct: 7 WIKADEGGW 15


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WSRLDDGLW 9
W + D+G W
Sbjct: 7 WIKADEGGW 15


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WSRLDDGLW 9
W + D+G W
Sbjct: 7 WIKADEGGW 15


>sp|NFI_ARCFU|ENDONUCLEASE V|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 LDDGLW 9
++DGLW
Sbjct: 143 VEDGLW 148


>sp|MOAA_HALSA|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 2 SRLDDGLW 9
+R DDG W
Sbjct: 326 TRTDDGGW 333


>sp|MOAA_HALS3|PROBABLE GTP 3',8-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 2 SRLDDGLW 9
+R DDG W
Sbjct: 326 TRTDDGGW 333




63|SequenceR|320|311|LKAAEWSRLD

>sp|MOAA_METKA|PROBABLE GTP 3',8-cyclase|Methanopyrus kandleri (strain AV19 /

Query: 1 LKAAEWSRL 9
L AAEW RL
Sbjct: 39 LSAAEWGRL 47


>sp|RL2_ARCFU|LARGE ribosomal subunit protein uL2|Archaeoglobus fulgidus (strain ATCC

Query: 2 KAAEWSRL 9
KAA+W R+
Sbjct: 182 KAAKWPRV 189


>sp|Y189_METAR|UPF0313 protein UNCMA_01890|Methanocella arvoryzae (strain DSM 22066

Query: 1 LKAAEWSRLD 10
LKA W R D
Sbjct: 6 LKALGWDRCD 15


>sp|RTCA_THEKO|RNA 3'-terminal phosphate cyclase|Thermococcus kodakarensis (strain

Query: 1 LKAAEWSRLD 10
LKA +W R++
Sbjct: 177 LKALKWERIE 186


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 KAAEWS 7
KAAEW+
Sbjct: 912 KAAEWA 917


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 AAEWSRLD 10
+ +W+RLD
Sbjct: 639 STDWARLD 646




64|SequenceR|325|316|LKRAFLKAAE

>sp|SERA_METJA|D-3-PHOSPHOGLYCERATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LKRAFLKA 8
+KRAFLK
Sbjct: 365 IKRAFLKG 372


>sp|RGYR_METJA|REVERSE gyrase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KRAFLKAAE 10
KRA LKA E
Sbjct: 714 KRAILKAVE 722




65|SequenceR|330|321|CRKPNLKRAF

>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 1 CRKPN 5
CRKPN
Sbjct: 49 CRKPN 53


>sp|COXX_PYRAR|PROTOHEME IX farnesyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 RKPNLKRAF 10
R+PN+ +AF
Sbjct: 29 RQPNIAQAF 37


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM

Query: 2 RKPNLKRAF 10
RKP+L R F
Sbjct: 66 RKPSLIRTF 74




66|SequenceR|335|326|PRVLFCRKPN

>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PRVLFCRKP 9
PR FC+ P
Sbjct: 171 PRCAFCKNP 179


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 PRVLFCR 7
P +LFCR
Sbjct: 198 PDILFCR 204


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 6 CRKPN 10
CRKPN
Sbjct: 49 CRKPN 53


>sp|COXX_THEVO|PROTOHEME IX farnesyltransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 VLFCRKPN 10
VLF RKP+
Sbjct: 253 VLFVRKPD 260


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 PRVLFCR 7
PR+ FCR
Sbjct: 19 PRMRFCR 25


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 PRVLFCRK 8
PR +CRK
Sbjct: 375 PRCPYCRK 382


>sp|SERB_METJA|PHOSPHOSERINE phosphatase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 RVLFCRKP 9
++ FC KP
Sbjct: 181 KIAFCAKP 188




67|SequenceR|340|331|PQQDGPRVLF

>sp|FOLCP_HALSA|PROBABLE bifunctional folylpolyglutamate synthase/dihydropteroate

Query: 1 PQQDGP 6
P QDGP
Sbjct: 35 PHQDGP 40


>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 1 PQQDGPRVL 9
PQ D P++L
Sbjct: 31 PQNDEPKLL 39




68|SequenceR|345|336|AELPRPQQDG

>sp|PAN1_HALVD|PROTEASOME-ACTIVATING nucleotidase 1|Haloferax volcanii (strain ATCC 29605

Query: 2 ELPRPQQDG 10
E+P+P +DG
Sbjct: 317 EVPKPNEDG 325


>sp|HTPX2_METMA|PROTEASE HtpX homolog 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AELPRPQ 7
A+LP+PQ
Sbjct: 90 ADLPKPQ 96


>sp|URIC_HALVD|URICASE volcanii (strain ATCC 29605

Query: 2 ELPRPQQDG 10
ELP P+ DG
Sbjct: 116 ELPVPEDDG 124


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 ELPRPQQDG 10
E+P P +DG
Sbjct: 318 EVPLPNEDG 326




69|SequenceR|350|341|FGGNLAELPR

>sp|KAE1_SULTO|TRNA N6-adenosine threonylcarbamoyltransferase|Sulfurisphaera tokodaii

Query: 2 GGNLAELP 9
GGN ELP
Sbjct: 191 GGNFIELP 198


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GGNLAELPR 10
GG L E+PR
Sbjct: 107 GGQLMEVPR 115


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 FGGNLA 6
FGGNLA
Sbjct: 438 FGGNLA 443


>sp|IF6_METM5|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C5 /

Query: 3 GNLAELP 9
GN AELP
Sbjct: 140 GNYAELP 146


>sp|PELO_THEPD|PROTEIN pelota homolog|Thermofilum pendens (strain DSM 2475

Query: 1 FGGNLAEL 8
FGG LAEL
Sbjct: 340 FGGALAEL 347


>sp|IF6_METM7|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain C7 /

Query: 3 GNLAELP 9
GN AELP
Sbjct: 140 GNYAELP 146


>sp|IF6_METMP|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain DSM 14266

Query: 3 GNLAELP 9
GN AELP
Sbjct: 140 GNYAELP 146


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 2 GGNLAELPR 10
GG +AEL R
Sbjct: 153 GGQMAELRR 161


>sp|AROE_PYRAB|SHIKIMATE dehydrogenase (NADP(+))|Pyrococcus abyssi (strain GE5 /

Query: 2 GGNLAELP 9
GG+L ELP
Sbjct: 160 GGSLDELP 167


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 NLAELP 9
NLAELP
Sbjct: 90 NLAELP 95


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 GGNLAELPR 10
GG +A +PR
Sbjct: 111 GGKIAAVPR 119


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 3 GNLAELPR 10
GN+A+LP+
Sbjct: 110 GNVADLPK 117


>sp|GLMS_PYRAB|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Pyrococcus abyssi (strain GE5 /

Query: 3 GNLAELPR 10
GNL E+P+
Sbjct: 272 GNLEEVPK 279


>sp|HDLA_ARCPA|HETERODISULFIDE reductase subunit A-like protein|Archaeoglobus profundus (strain

Query: 2 GGNLAELPR 10
GGN+A+L +
Sbjct: 181 GGNMAKLDK 189


>sp|TRET_THELN|TREHALOSE synthase|Thermococcus litoralis (strain ATCC 51850

Query: 1 FGGNLAEL 8
FGG +AE+
Sbjct: 49 FGGGVAEI 56


>sp|TRET_PYRFU|TREHALOSE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FGGNLAEL 8
FGG +AE+
Sbjct: 49 FGGGVAEI 56


>sp|TRET_PYRHO|TREHALOSE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FGGNLAEL 8
FGG +AE+
Sbjct: 50 FGGGVAEI 57


>sp|PUR5_METKA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GGNLAELP 9
GG LA LP
Sbjct: 136 GGELATLP 143




70|SequenceR|355|346|IRSLNFGGNL

>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 3 SLNFGGNL 10
SLNFGG L
Sbjct: 274 SLNFGGPL 281


>sp|RKD1_PYRCJ|ARCADIN-1 calidifontis (strain DSM 21063

Query: 1 IRSLNFGG 8
+RSL FGG
Sbjct: 62 VRSLPFGG 69


>sp|CBIA_METS3|COBYRINATE a,c-diamide synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 NFGGNL 10
NFGGNL
Sbjct: 437 NFGGNL 442


>sp|PRIL_METJA|DNA primase large subunit PriL|Methanocaldococcus jannaschii (strain

Query: 1 IRSLNFGGNL 10
I++LN+ GN+
Sbjct: 234 IKALNYKGNI 243


>sp|DHYS_PYRAE|PROBABLE deoxyhypusine synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 IRSLNFGGNL 10
+R L+F GNL
Sbjct: 35 VRFLSFTGNL 44


>sp|FTR_METTH|FORMYLMETHANOFURAN--TETRAHYDROMETHANOPTERIN formyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 1 IRSLNFGGNL 10
I + N+GGNL
Sbjct: 277 ISAGNYGGNL 286


>sp|Y347_PICTO|UPF0145 protein PTO0347|Picrophilus torridus (strain ATCC 700027

Query: 1 IRSLNFGGNL 10
+RS GGNL
Sbjct: 29 VRSRGLGGNL 38


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 5 NFGGNL 10
NFGGN
Sbjct: 52 NFGGNF 57


>sp|Y1063_METPE|UPF0173 metal-dependent hydrolase Mpal_1063|Methanosphaerula palustris

Query: 4 LNFGGNL 10
LNFGG++
Sbjct: 77 LNFGGSI 83


>sp|FLAH_METVO|ARCHAEAL flagellar ATP-binding protein FlaH|Methanococcus voltae

Query: 3 SLNFGGNL 10
+ +FGGNL
Sbjct: 185 TFSFGGNL 192


>sp|Y873_SACI7|UPF0145 protein YG5714_0873|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 IRSLNFGGNL 10
+RS GGNL
Sbjct: 33 VRSRGLGGNL 42


>sp|Y182_THEAC|UPF0145 protein Ta0182|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 IRSLNFGGNL 10
+RS GGNL
Sbjct: 29 VRSRGLGGNL 38


>sp|Y1080_SULTO|UPF0145 protein STK_10800|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 IRSLNFGGNL 10
+RS GGN+
Sbjct: 33 VRSRGLGGNI 42




71|SequenceR|360|351|LATRLIRSLN

>sp|FEN_METST|FLAP endonuclease 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ATRLIRSL 9
ATR+IR+L
Sbjct: 181 ATRMIRNL 188


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ATRLIRSLN 10
A RLI SLN
Sbjct: 84 ALRLIESLN 92


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 ATRLIRSLN 10
A RLI SLN
Sbjct: 84 ALRLIESLN 92




72|SequenceR|365|356|KHWAPLATRL

>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 HWAPL 6
HWAPL
Sbjct: 512 HWAPL 516


>sp|RS24_IGNH4|SMALL ribosomal subunit protein eS24|Ignicoccus hospitalis (strain

Query: 1 KHWAPLATR 9
K W PLA R
Sbjct: 11 KRWNPLAER 19


>sp|DPOL2_METTH|DNA polymerase PolB subunit 2|Methanothermobacter thermautotrophicus

Query: 1 KHWAPLATR 9
+ WAP+A +
Sbjct: 67 RDWAPIAKK 75


>sp|FBPAP_METJA|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 HWAPL 6
HW PL
Sbjct: 273 HWGPL 277


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 3 WAPLATRL 10
++P+ATRL
Sbjct: 320 YSPIATRL 327


>sp|AROE_NATPD|SHIKIMATE dehydrogenase (NADP(+))|Natronomonas pharaonis (strain ATCC 35678

Query: 3 WAPLATRL 10
+APL TRL
Sbjct: 210 YAPLETRL 217


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 HWAPL 6
HWAP+
Sbjct: 512 HWAPV 516


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HWAPL 6
HWAP+
Sbjct: 506 HWAPV 510




73|SequenceR|370|361|FSVISKHWAP

>sp|PELO_HALSA|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 700922

Query: 4 ISKHWAP 10
+ KHW P
Sbjct: 113 VEKHWQP 119


>sp|PELO_HALS3|PROTEIN pelota homolog|Halobacterium salinarum (strain ATCC 29341

Query: 4 ISKHWAP 10
+ KHW P
Sbjct: 113 VEKHWQP 119


>sp|PELO_METBF|PROTEIN pelota homolog|Methanosarcina barkeri (strain Fusaro /

Query: 1 FSVISKHW 8
SVI +HW
Sbjct: 107 LSVIKEHW 114


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 2 SVISKHWA 9
+ ++KHWA
Sbjct: 365 NTLTKHWA 372


>sp|PSTS_METJA|PHOSPHATE-BINDING protein PstS|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FSVISKHWA 9
S+ISK WA
Sbjct: 207 LSLISKEWA 215


>sp|PURL_SULTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 VISKHWA 9
+ISK WA
Sbjct: 388 IISKEWA 394


>sp|PELO_METMA|PROTEIN pelota homolog|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SVISKHW 8
S+I +HW
Sbjct: 108 SIIKEHW 114




74|SequenceR|375|366|ERLQRFSVIS

>sp|SFSA_SULAC|SUGAR fermentation stimulation protein homolog|Sulfolobus

Query: 1 ERLQRFSVIS 10
ER+ RF VI+
Sbjct: 22 ERINRFVVIT 31


>sp|Y2205_ARCFU|UNCHARACTERIZED protein AF_2205|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ERLQRFSVI 9
ERLQ FS++
Sbjct: 388 ERLQPFSML 396


>sp|TRUB_NANEQ|PROBABLE tRNA pseudouridine synthase B|Nanoarchaeum equitans (strain

Query: 1 ERLQRFSVIS 10
ERL ++SVI+
Sbjct: 53 ERLLKYSVIN 62


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ERLQRFSV 8
+RL+RFS+
Sbjct: 380 KRLERFSI 387




75|SequenceR|380|371|EGLVEERLQR

>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EGLVEERL 8
EG++EE+L
Sbjct: 1225 EGMIEEKL 1232


>sp|SYK2_METAC|LYSINE--TRNA ligase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGLVEERL 8
EGLVE++L
Sbjct: 383 EGLVEDKL 390


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EGLVEERLQR 10
EG++ E+L R
Sbjct: 449 EGIISEKLYR 458


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 EGLVEERLQ 9
+GLVEE+++
Sbjct: 312 DGLVEEKVK 320




76|SequenceR|385|376|EVNSLEGLVE

>sp|TRMY_PYRFU|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus furiosus

Query: 1 EVNSLEGLV 9
E+N LEGLV
Sbjct: 165 ELNFLEGLV 173


>sp|Y279_THEVO|UPF0200 protein TV0279|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVNSLEGLVE 10
++ S+EGL+E
Sbjct: 124 DIRSMEGLIE 133


>sp|Y1227_ARCFU|UNCHARACTERIZED protein AF_1227|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EVNSLEGLVE 10
E NS+ GLVE
Sbjct: 50 ESNSVSGLVE 59


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EVNSLEGLVE 10
+VNS EG++E
Sbjct: 330 KVNSKEGVIE 339




77|SequenceR|390|381|LGAAQEVNSL

***** No hits found ******


78|SequenceR|395|386|FRSWRLGAAQ

>sp|PUS10_VULDI|TRNA pseudouridine synthase Pus10|Vulcanisaeta distributa (strain DSM

Query: 1 FRSWRLGA 8
FRS+RLG+
Sbjct: 121 FRSFRLGS 128




79|SequenceR|400|391|RNLDPFRSWR

>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 LDPFRSWR 10
+DP RSW+
Sbjct: 877 IDPMRSWK 884


>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 LDPFRSW 9
+DP RSW
Sbjct: 338 VDPLRSW 344


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 3 LDPFRSW 9
L+P RSW
Sbjct: 338 LEPLRSW 344


>sp|RL10_METKA|LARGE ribosomal subunit protein uL10|Methanopyrus kandleri (strain AV19 /

Query: 2 NLDPFRSWR 10
NLDPF+ ++
Sbjct: 104 NLDPFKLYK 112


>sp|HIS4_METHJ|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanospirillum hungatei JF-1

Query: 1 RNLDPFRSW 9
R+LD RSW
Sbjct: 83 RSLDDARSW 91


>sp|GCSH_PICTO|PROBABLE glycine cleavage system H|Picrophilus torridus (strain ATCC

Query: 2 NLDPFRSW 9
N DP+++W
Sbjct: 92 NEDPYKNW 99


>sp|GCSH_THEAC|PROBABLE glycine cleavage system H|Thermoplasma acidophilum (strain ATCC

Query: 2 NLDPFRSW 9
N DP+ SW
Sbjct: 94 NKDPYGSW 101


>sp|GCSH_PYRFU|PROBABLE glycine cleavage system H|Pyrococcus furiosus (strain ATCC 43587

Query: 2 NLDPFRSW 9
N DP+ +W
Sbjct: 98 NEDPYEAW 105


>sp|AGL6_HALVD|LOW-SALT glycan biosynthesis hexosyltransferase Agl6|Haloferax volcanii

Query: 4 DPFRSW 9
DPF +W
Sbjct: 337 DPFTTW 342


>sp|GCSH_THEKO|PROBABLE glycine cleavage system H|Thermococcus kodakarensis (strain ATCC

Query: 2 NLDPFRSW 9
N DP+ +W
Sbjct: 98 NEDPYENW 105


>sp|GCSH_THEGJ|PROBABLE glycine cleavage system H|Thermococcus gammatolerans (strain DSM

Query: 2 NLDPFRSW 9
N DP+ +W
Sbjct: 98 NEDPYENW 105


>sp|ASOR_PYRFU|ALIPHATIC sulfonate oxidoreductase, WOR-like subunit|Pyrococcus furiosus

Query: 1 RNLDPFRSWR 10
R+ +P R+W+
Sbjct: 264 RSSEPIRNWQ 273


>sp|TRI_THEAC|TRICORN protease|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 DPFRSWR 10
DPFRS R
Sbjct: 758 DPFRSGR 764


>sp|SYT_METS3|THREONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 DPFRSWR 10
DPF +W+
Sbjct: 295 DPFITWK 301


>sp|CYSC_ARCFU|PROBABLE adenylyl-sulfate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LDPFRSWR 10
+ P+R+WR
Sbjct: 82 VSPYRAWR 89


>sp|GCSH3_SULAC|PROBABLE glycine cleavage system H|Sulfolobus acidocaldarius (strain ATCC

Query: 2 NLDPFRSW 9
N DP+ SW
Sbjct: 99 NEDPYGSW 106




80|SequenceR|405|396|HGKLIRNLDP

>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 LIRNLDP 10
LIRN+DP
Sbjct: 776 LIRNVDP 782


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 4 LIRNLDP 10
LIRN+DP
Sbjct: 776 LIRNVDP 782


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 LIRNLDP 10
LIRN+DP
Sbjct: 776 LIRNVDP 782


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 HGKLIRNLDP 10
H LIR DP
Sbjct: 226 HADLIREADP 235


>sp|COBQ_METVO|PROBABLE cobyric acid synthase|Methanococcus voltae

Query: 1 HGKLIRNLD 9
HGK +NLD
Sbjct: 92 HGKPYKNLD 100


>sp|PGMI_THEAC|BIFUNCTIONAL phosphoglucose/phosphomannose isomerase|Thermoplasma acidophilum

Query: 1 HGKLIRNLDP 10
H IRN+DP
Sbjct: 287 HLARIRNVDP 296


>sp|GLMM_PYRAB|PROBABLE phosphoglucosamine mutase|Pyrococcus abyssi (strain GE5 /

Query: 1 HGKLIRNLDP 10
HG +R L+P
Sbjct: 200 HGFFVRELEP 209


>sp|DNLJ_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 5 IRNLDP 10
+RNLDP
Sbjct: 230 LRNLDP 235


>sp|GLYA_THEGJ|SERINE hydroxymethyltransferase|Thermococcus gammatolerans (strain DSM

Query: 3 KLIRNLDP 10
KLIR L+P
Sbjct: 156 KLIRELEP 163


>sp|NURA_SACS2|DNA double-strand break repair nuclease|Saccharolobus solfataricus

Query: 3 KLIRNLD 9
KLIRN+D
Sbjct: 155 KLIRNVD 161


>sp|HIS3_METVS|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GKLIRNLD 9
GK+++N+D
Sbjct: 13 GKIVQNMD 20


>sp|HIS3_METVA|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanococcus vannielii

Query: 2 GKLIRNLD 9
GK+++N+D
Sbjct: 13 GKIVQNMD 20


>sp|DACZ_HALVD|DIADENYLATE cyclase|Haloferax volcanii (strain ATCC 29605

Query: 2 GKLIRNLDP 10
GK+I +DP
Sbjct: 258 GKMILEIDP 266


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 HGKLIRNLD 9
H K ++NLD
Sbjct: 623 HSKEVKNLD 631


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 1 HGKLIRNLDP 10
HGK++ DP
Sbjct: 979 HGKVLAVADP 988


>sp|RL18E_SACS2|LARGE ribosomal subunit protein eL18|Saccharolobus solfataricus (strain

Query: 3 KLIRNLD 9
KLIRNL+
Sbjct: 13 KLIRNLE 19




81|SequenceR|410|401|LEGKRHGKLI

>sp|FTHS_PICTO|FORMATE--TETRAHYDROFOLATE ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 LEGKRHGKLI 10
L+ KR+GKLI
Sbjct: 33 LKNKRYGKLI 42


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 1 LEGKRHGKLI 10
+ G+RHGK++
Sbjct: 54 ITGERHGKIV 63


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEGKRHGKLI 10
+ G+RHGK++
Sbjct: 54 ITGERHGKIV 63


>sp|Y1477_METJA|UNCHARACTERIZED protein MJ1477|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LEGKRHGKLI 10
LE +HGKL+
Sbjct: 242 LEYDKHGKLL 251


>sp|NIKR_THESM|PUTATIVE nickel-responsive regulator|Thermococcus sibiricus (strain DSM

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|NIKR_PYRHO|PUTATIVE nickel-responsive regulator|Pyrococcus horikoshii (strain ATCC

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|NIKR_PYRAB|PUTATIVE nickel-responsive regulator|Pyrococcus abyssi (strain GE5 /

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 LEGKRHGKLI 10
++G+RHGK +
Sbjct: 54 IKGERHGKTV 63


>sp|NIKR_PYRFU|PUTATIVE nickel-responsive regulator|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|NIKR_THEKO|PUTATIVE nickel-responsive regulator|Thermococcus kodakarensis (strain ATCC

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|MTAD1_ARCFU|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 KRHGKLI 10
K+HGKLI
Sbjct: 214 KQHGKLI 220


>sp|NIKR_THEON|PUTATIVE nickel-responsive regulator|Thermococcus onnurineus (strain NA1)

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|NIKR_THEGJ|PUTATIVE nickel-responsive regulator|Thermococcus gammatolerans (strain DSM

Query: 1 LEGKRHGKLI 10
L+G +HGKL+
Sbjct: 120 LKGVKHGKLV 129


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 LEGKRHGKL 9
++G+RHGK+
Sbjct: 54 IKGERHGKI 62


>sp|PYRE_METMJ|OROTATE phosphoribosyltransferase|Methanoculleus marisnigri (strain ATCC

Query: 2 EGKRHGK 8
EGK HGK
Sbjct: 88 EGKDHGK 94


>sp|KPTA_AERPE|PROBABLE RNA 2'-phosphotransferase|Aeropyrum pernix (strain ATCC 700893

Query: 3 GKRHGKLI 10
G+RHG L+
Sbjct: 166 GRRHGNLV 173


>sp|HMDH_METJA|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 RHGKLI 10
RHGKLI
Sbjct: 166 RHGKLI 171


>sp|GGGPS_PYRAE|GERANYLGERANYLGLYCERYL phosphate synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LEGKRHGKLI 10
LEG RH LI
Sbjct: 8 LEGVRHFTLI 17


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GKRHGKLI 10
G R+GKL+
Sbjct: 815 GPRYGKLV 822


>sp|RS28_NANEQ|SMALL ribosomal subunit protein eS28|Nanoarchaeum equitans (strain

Query: 1 LEGKRHGKLI 10
LEGK G+LI
Sbjct: 49 LEGKDAGRLI 58


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 GKRHGKLI 10
G R+GKL+
Sbjct: 818 GPRYGKLV 825


>sp|HMDH_METTH|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 5 RHGKLI 10
RHGKL+
Sbjct: 162 RHGKLV 167


>sp|GGR_METAR|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocella arvoryzae (strain DSM 22066

Query: 1 LEGKRHG 7
+ GKRHG
Sbjct: 136 ITGKRHG 142


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GKRHGKLI 10
G R+GKL+
Sbjct: 818 GPRYGKLV 825


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 1 LEGKRHGKLI 10
+ +RHGK++
Sbjct: 54 ITAERHGKIV 63


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 1 LEGKRHGKLI 10
+ +RHGK++
Sbjct: 54 ITAERHGKIV 63


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 LEGKRHGKLI 10
L GK GKLI
Sbjct: 609 LRGKADGKLI 618


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 1 LEGKRHGKLI 10
+ +RHGK++
Sbjct: 54 ITAERHGKIV 63




82|SequenceR|415|406|GTFVTLEGKR

>sp|Y1414_METJA|UNCHARACTERIZED protein MJ1414|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GTFVTLEGK 9
GTF+ LEGK
Sbjct: 103 GTFIKLEGK 111


>sp|MTAP_THEAC|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 GTFVTLEGKR 10
GT++T+EG R
Sbjct: 156 GTYITIEGPR 165


>sp|SYM_META3|METHIONINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GTFVTLEGKR 10
G ++TLEGK+
Sbjct: 321 GGYLTLEGKK 330


>sp|MTAP_AERPE|S-METHYL-5'-THIOADENOSINE phosphorylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 GTFVTLEGKR 10
GT+V +EG R
Sbjct: 165 GTYVCIEGPR 174


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 FVTLEGKR 10
FV+LEGK+
Sbjct: 624 FVSLEGKK 631


>sp|MTAP_PYRHO|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GTFVTLEGKR 10
GT+V +EG R
Sbjct: 152 GTYVCIEGPR 161


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 FVTLEGK 9
F+TLEGK
Sbjct: 371 FITLEGK 377


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GTFVTLEGK 9
G FVTLE K
Sbjct: 47 GVFVTLEKK 55


>sp|MTAP_THEKO|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GTFVTLEGKR 10
GT+V +EG R
Sbjct: 152 GTYVCIEGPR 161


>sp|MTAP_THEPD|S-METHYL-5'-THIOADENOSINE phosphorylase|Thermofilum pendens (strain DSM 2475

Query: 1 GTFVTLEGKR 10
GT++ +EG R
Sbjct: 156 GTYICIEGPR 165


>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GTFVTLEGKR 10
GT++ +EG R
Sbjct: 160 GTYICIEGPR 169


>sp|MTAP_HYPBU|S-METHYL-5'-THIOADENOSINE phosphorylase|Hyperthermus butylicus (strain DSM 5456

Query: 1 GTFVTLEGKR 10
GT++ +EG R
Sbjct: 164 GTYICIEGPR 173


>sp|MTAP_PYRFU|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GTFVTLEGKR 10
GT++ +EG R
Sbjct: 152 GTYICIEGPR 161


>sp|SYC_METM6|CYSTEINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 GTFVTLEG 8
G FVT+EG
Sbjct: 271 GNFVTIEG 278


>sp|MTAP_PYRAB|S-METHYL-5'-THIOADENOSINE phosphorylase|Pyrococcus abyssi (strain GE5 /

Query: 1 GTFVTLEGKR 10
GT++ +EG R
Sbjct: 152 GTYICIEGPR 161


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 GTFVTLEGKR 10
G F++LEG++
Sbjct: 316 GEFLSLEGEK 325


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 FVTLEGKR 10
+VT+EGK+
Sbjct: 637 YVTIEGKK 644


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 FVTLEGKR 10
+VT+EGK+
Sbjct: 640 YVTIEGKK 647


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 FVTLEGKR 10
+VT+EGK+
Sbjct: 640 YVTIEGKK 647


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 FVTLEGKR 10
+VT+EGK+
Sbjct: 640 YVTIEGKK 647


>sp|SYL_META3|LEUCINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 FVTLEGKR 10
+VT+EGK+
Sbjct: 651 YVTIEGKK 658


>sp|AATI_THEKO|A-TYPE ATP synthase subunit I|Thermococcus kodakarensis (strain ATCC

Query: 1 GTFVTLEGKR 10
GTF + EGKR
Sbjct: 637 GTFYSGEGKR 646


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FVTLEGKR 10
+VT+EGK+
Sbjct: 626 YVTIEGKK 633


>sp|SYM_PYRHO|METHIONINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FVTLEGKR 10
++TLEGK+
Sbjct: 337 YLTLEGKK 344


>sp|SYM_PYRAB|METHIONINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 FVTLEGKR 10
++TLEGK+
Sbjct: 337 YLTLEGKK 344


>sp|IF2B_PYRAB|TRANSLATION initiation factor 2 subunit|Pyrococcus abyssi (strain GE5 /

Query: 5 TLEGKR 10
TLEGKR
Sbjct: 76 TLEGKR 81


Query: 1 GTFVTLEGKR 10
G VT+EG +
Sbjct: 34 GALVTIEGNK 43


>sp|SYM_PYRFU|METHIONINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FVTLEGKR 10
++TLEGK+
Sbjct: 337 YLTLEGKK 344


>sp|SMC_METVO|CHROMOSOME partition protein Smc|Methanococcus voltae

Query: 3 FVTLEGK 9
FVTLEG+
Sbjct: 666 FVTLEGE 672


>sp|IF2B_PYRHO|TRANSLATION initiation factor 2 subunit|Pyrococcus horikoshii (strain ATCC

Query: 5 TLEGKR 10
TLEGKR
Sbjct: 76 TLEGKR 81


Query: 1 GTFVTLEGKR 10
G VT+EG +
Sbjct: 34 GALVTIEGNK 43


>sp|PNPH_THEKO|PROBABLE 6-oxopurine nucleoside phosphorylase|Thermococcus kodakarensis

Query: 1 GTFVTLEGKR 10
GT+ +EG R
Sbjct: 159 GTYACMEGPR 168


>sp|IF2B_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 GTFVTLEGKR 10
G VT+EG +
Sbjct: 34 GALVTIEGNK 43


>sp|AROD_METM7|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C7 /

Query: 2 TFVTLEGK 9
TF ++EGK
Sbjct: 191 TFASMEGK 198


>sp|AROD_METM5|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C5 /

Query: 2 TFVTLEGK 9
TF ++EGK
Sbjct: 191 TFASMEGK 198


>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 GTFVTLEGKR 10
GT+ +EG R
Sbjct: 134 GTYACIEGPR 143


>sp|AROD_METM6|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain C6 /

Query: 2 TFVTLEGK 9
TF ++EGK
Sbjct: 191 TFASMEGK 198


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FVTLEGKR 10
FVTL G R
Sbjct: 141 FVTLSGSR 148


>sp|RL18A_ARCFU|LARGE ribosomal subunit protein eL20|Archaeoglobus fulgidus (strain

Query: 1 GTFVTLEG 8
G F TLEG
Sbjct: 7 GAFKTLEG 14


>sp|RS4E_SULAC|SMALL ribosomal subunit protein eS4|Sulfolobus acidocaldarius (strain

Query: 2 TFVTLEGK 9
+ VTLEGK
Sbjct: 209 SLVTLEGK 216


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 1 GTFVTLE 7
G FVTLE
Sbjct: 55 GVFVTLE 61




83|SequenceR|420|411|GSGTPGTFVT

>sp|Y305_METJA|UNCHARACTERIZED protein MJ0305|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GSGTPGTFV 9
GSGTPG V
Sbjct: 305 GSGTPGGLV 313


>sp|DNLI1_METAC|DNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GSGTPGTF 8
G+G PG F
Sbjct: 205 GAGAPGYF 212


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 3 GTPGTFVT 10
G PG FVT
Sbjct: 52 GEPGVFVT 59


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SGTPGT 7
+GTPGT
Sbjct: 6 TGTPGT 11


>sp|KAD6_METBF|PUTATIVE adenylate kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 SGTPGT 7
+GTPGT
Sbjct: 6 TGTPGT 11


>sp|KAD6_METAC|PUTATIVE adenylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SGTPGT 7
+GTPGT
Sbjct: 6 TGTPGT 11


>sp|KAD6_ARCFU|PUTATIVE adenylate kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SGTPGT 7
+GTPGT
Sbjct: 6 TGTPGT 11


>sp|Y1642_METM7|UPF0251 protein MmarC7_1642|Methanococcus maripaludis (strain C7 /

Query: 2 SGTPGT 7
+GTPGT
Sbjct: 26 AGTPGT 31


>sp|RPA_METTH|REPLICATION factor A|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 GSGTPG 6
G GTPG
Sbjct: 556 GDGTPG 561


>sp|Y028_PYRCJ|MEMO1 family protein Pcal_0028|Pyrobaculum calidifontis (strain DSM

Query: 1 GSGTPGTFV 9
G G P TFV
Sbjct: 72 GYGAPTTFV 80


>sp|HEM1_METBU|GLUTAMYL-TRNA reductase|Methanococcoides burtonii (strain DSM 6242

Query: 1 GSGTPGTFVT 10
G+G GT VT
Sbjct: 180 GTGEMGTLVT 189


>sp|NTPTH_HYPBU|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Hyperthermus butylicus (strain DSM 5456

Query: 2 SGTPGTFV 9
SG PG FV
Sbjct: 126 SGKPGLFV 133


>sp|ILVC_HALMA|KETOL-ACID reductoisomerase (NADP(+))|Haloarcula marismortui (strain ATCC

Query: 1 GSGTPG 6
G GTPG
Sbjct: 148 GEGTPG 153




84|SequenceR|425|416|IFTTKGSGTP

>sp|PSB_METJA|PROTEASOME subunit beta|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 133 FTATGSGSP 141


>sp|PSB_METFA|PROTEASOME subunit beta|Methanocaldococcus fervens (strain DSM 4213

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 133 FTATGSGSP 141


>sp|PSB_METVM|PROTEASOME subunit beta|Methanocaldococcus vulcanius (strain ATCC 700851

Query: 2 FTTKGSGTP 10
FT+ GSG+P
Sbjct: 133 FTSTGSGSP 141


>sp|PSB_META3|PROTEASOME subunit beta|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 141 FTATGSGSP 149


>sp|PSB_METMP|PROTEASOME subunit beta|Methanococcus maripaludis (strain DSM 14266

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 141 FTATGSGSP 149


>sp|PSB_METSF|PROTEASOME subunit beta|Methanocaldococcus sp. (strain FS406-22)

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 133 FTATGSGSP 141


>sp|PSB_METM7|PROTEASOME subunit beta|Methanococcus maripaludis (strain C7 /

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 141 FTATGSGSP 149


>sp|PSB_METM6|PROTEASOME subunit beta|Methanococcus maripaludis (strain C6 /

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 141 FTATGSGSP 149


>sp|PSB_METM5|PROTEASOME subunit beta|Methanococcus maripaludis (strain C5 /

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 141 FTATGSGSP 149


>sp|PSB2_THESM|PROTEASOME subunit beta 2|Thermococcus sibiricus (strain DSM 12597

Query: 2 FTTKGSGTP 10
+TT GSG+P
Sbjct: 130 YTTTGSGSP 138


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 2 FTTKGSGTP 10
FTT G G P
Sbjct: 469 FTTPGIGVP 477


>sp|PSB_METST|PROTEASOME subunit beta|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 FTTKGSGTP 10
FT+ GSG+P
Sbjct: 131 FTSTGSGSP 139


>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 1 IFTTKGSGTP 10
+F T SGTP
Sbjct: 149 LFATDPSGTP 158


>sp|PSB_METVS|PROTEASOME subunit beta|Methanococcus vannielii (strain ATCC 35089

Query: 2 FTTKGSGTP 10
FT GSG+P
Sbjct: 141 FTATGSGSP 149


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 2 FTTKGSGTP 10
FT G+G P
Sbjct: 323 FTVSGAGMP 331


>sp|MUTL_METLZ|DNA mismatch repair protein MutL|Methanocorpusculum labreanum (strain

Query: 2 FTTKGSGTP 10
FTTK G+P
Sbjct: 113 FTTKERGSP 121


>sp|GSA_NATPD|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 TKGSGTP 10
T+G GTP
Sbjct: 359 TRGDGTP 365




85|SequenceR|430|421|LAYESIFTTK

>sp|SURE_METB6|5'-NUCLEOTIDASE SurE|Methanoregula boonei (strain DSM 21154

Query: 1 LAYESIFTT 9
L+YESI T+
Sbjct: 100 LSYESIMTS 108


>sp|ARLY_METLZ|ARGININOSUCCINATE lyase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 LAYESIF 7
LAYES+F
Sbjct: 172 LAYESLF 178


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 4 ESIFTTK 10
E+IFTTK
Sbjct: 75 EAIFTTK 81


>sp|Y801_METJA|UNCHARACTERIZED ATP-binding protein MJ0801|Methanocaldococcus jannaschii (strain

Query: 4 ESIFTTK 10
E+IFTTK
Sbjct: 71 EAIFTTK 77




86|SequenceR|435|426|QSCLDLAYES

>sp|Y1105_THEAC|UNCHARACTERIZED protein Ta1105|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 QSCLDLAYE 9
+SCLDLA E
Sbjct: 110 RSCLDLARE 118


>sp|Y678_METMP|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 3 CLDLAYES 10
C+DL YES
Sbjct: 9 CIDLLYES 16


>sp|Y210_METM6|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 3 CLDLAYES 10
C+DL YES
Sbjct: 9 CIDLLYES 16


>sp|Y898_METM5|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 3 CLDLAYES 10
C+DL YES
Sbjct: 9 CIDLLYES 16


>sp|Y1702_METM7|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 3 CLDLAYES 10
C+DL YES
Sbjct: 9 CIDLLYES 16


>sp|TRM56_THEVO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermoplasma volcanium

Query: 1 QSCLDLAYE 9
Q CLDL Y+
Sbjct: 173 QGCLDLLYK 181


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 QSCLDLA 7
Q CLDLA
Sbjct: 622 QKCLDLA 628


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 QSCLDLA 7
Q CLDLA
Sbjct: 619 QKCLDLA 625


>sp|Y1514_METVS|PUTATIVE HTH-type transcriptional regulatory protein|Methanococcus

Query: 3 CLDLAYES 10
C++L YES
Sbjct: 9 CMNLLYES 16


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 LDLAYE 9
LDLAYE
Sbjct: 943 LDLAYE 948




87|SequenceR|440|431|LTNVGQSCLD

>sp|GADH_PICTO|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Picrophilus torridus (strain ATCC 700027

Query: 3 NVGQSCL 9
NVGQSC+
Sbjct: 274 NVGQSCI 280


>sp|G1PDH_METTP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanothrix thermoacetophila (strain DSM

Query: 1 LTNVGQSCLD 10
L N+G C+D
Sbjct: 25 LANIGDVCVD 34


>sp|GADH_THEAC|D-GLYCERALDEHYDE dehydrogenase (NADP(+))|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 NVGQSCL 9
N GQSC+
Sbjct: 276 NAGQSCI 282


>sp|RL15_METMA|LARGE ribosomal subunit protein uL15|Methanosarcina mazei (strain ATCC

Query: 1 LTNVGQSCLD 10
+ N G SC+D
Sbjct: 129 IENAGGSCID 138


>sp|RL15_METAC|LARGE ribosomal subunit protein uL15|Methanosarcina acetivorans (strain

Query: 1 LTNVGQSCLD 10
+ N G SC+D
Sbjct: 129 IENAGGSCID 138


>sp|Y791_METB6|UPF0316 protein Mboo_0791|Methanoregula boonei (strain DSM 21154

Query: 3 NVGQSCLD 10
N G +CLD
Sbjct: 144 NYGTTCLD 151




88|SequenceR|445|436|EFSGWLTNVG

>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 1 EFSGWLTNVG 10
EF+GWL V
Sbjct: 121 EFAGWLVAVA 130


>sp|TRPB1_METMA|TRYPTOPHAN synthase beta chain 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 FSGWLTNVG 10
F W+TN+G
Sbjct: 180 FRDWVTNIG 188


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 EFSGWL 6
+FSGWL
Sbjct: 164 DFSGWL 169


>sp|RRP4_PYRAB|EXOSOME complex component Rrp4|Pyrococcus abyssi (strain GE5 /

Query: 1 EFSGWLTNVG 10
+FS W+ ++G
Sbjct: 76 KFSSWVVDIG 85


>sp|SYP_METHJ|PROLINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EFSGWLTNV 9
+FSGW ++
Sbjct: 13 DFSGWYNDI 21


>sp|BIOD_HALMT|ATP-DEPENDENT dethiobiotin synthetase BioD|Haloferax mediterranei (strain ATCC

Query: 4 GWLTNVG 10
GWL N G
Sbjct: 28 GWLRNAG 34


>sp|RRP4_PYRHO|EXOSOME complex component Rrp4|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EFSGWLTNVG 10
+FS W+ ++G
Sbjct: 76 KFSSWVVDIG 85


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 3 SGWLTNVG 10
SG+ TNVG
Sbjct: 93 SGYATNVG 100


>sp|BIOF_META3|PUTATIVE 8-amino-7-oxononanoate synthase|Methanococcus aeolicus (strain ATCC

Query: 3 SGWLTNVG 10
SG+ TNVG
Sbjct: 98 SGYATNVG 105


>sp|RRP4_METKA|EXOSOME complex component Rrp4|Methanopyrus kandleri (strain AV19 /

Query: 1 EFSGWLTNV 9
+FS WL +V
Sbjct: 78 KFSSWLIDV 86


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 SGWLTNVG 10
+GW N+G
Sbjct: 97 AGWTINIG 104


>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EFSGWLTNV 9
E GW +NV
Sbjct: 211 ELDGWPSNV 219


>sp|MCH_METMA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 EFSGWLTNVG 10
+++GW +VG
Sbjct: 93 QYAGWRISVG 102


>sp|RS13_HALWD|SMALL ribosomal subunit protein uS13|Haloquadratum walsbyi (strain DSM

Query: 4 GWLTN 8
GW+TN
Sbjct: 89 GWMTN 93


>sp|Y1517_METJA|UNCHARACTERIZED protein MJ1517|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 FSGWL 6
FSGWL
Sbjct: 204 FSGWL 208


>sp|MCH_METBF|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 1 EFSGWLTNVG 10
+++GW +VG
Sbjct: 93 QYAGWRISVG 102


>sp|MCH_METAC|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EFSGWLTNVG 10
+++GW +VG
Sbjct: 93 QYAGWRISVG 102


>sp|DMO1_DESMO|HOMING endonuclease I-DmoI|Desulfurococcus mucosus (Desulfurococcus

Query: 3 SGWLTNVG 10
S WL N+G
Sbjct: 139 SRWLNNLG 146




89|SequenceR|450|441|RVNSIEFSGW

>sp|AROE_HALSA|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 2 VNSIEFSG 9
VN+I+FSG
Sbjct: 84 VNTIDFSG 91


>sp|AROE_HALS3|SHIKIMATE dehydrogenase (NADP(+))|Halobacterium salinarum (strain ATCC

Query: 2 VNSIEFSG 9
VN+I+FSG
Sbjct: 84 VNTIDFSG 91


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 5 IEFSGW 10
++FSGW
Sbjct: 163 VDFSGW 168


>sp|AATD_HALLT|A-TYPE ATP synthase subunit D|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 RVNSIEFS 8
RVN++EF+
Sbjct: 165 RVNALEFT 172


>sp|SYFB_HALMA|PHENYLALANINE--TRNA ligase beta subunit|Haloarcula marismortui (strain ATCC 43049

Query: 5 IEFSGW 10
+EF GW
Sbjct: 34 LEFEGW 39


>sp|HIS8_SULTO|HISTIDINOL-PHOSPHATE aminotransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 RVNSIEFSGW 10
RVN IE W
Sbjct: 130 RVNLIENDNW 139


>sp|SURE_CALMQ|5'-NUCLEOTIDASE SurE|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 VNSIEFSGW 10
+N IE GW
Sbjct: 158 INHIEAEGW 166




90|SequenceR|455|446|MVRALRVNSI

>sp|CAPPA_METTH|PHOSPHOENOLPYRUVATE carboxylase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 MVRALRVN 8
++RALR+N
Sbjct: 456 IIRALRIN 463




91|SequenceR|460|451|AFQTLMVRAL

***** No hits found ******


92|SequenceR|465|456|ELRGEAFQTL

>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 1 ELRGEAFQ 8
ELRGE+F+
Sbjct: 359 ELRGESFR 366


>sp|TRPB_THEVO|TRYPTOPHAN synthase beta chain|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GEAFQTL 10
GEAF+TL
Sbjct: 34 GEAFETL 40


>sp|KITH_PYRAE|THYMIDINE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELRGEAFQT 9
+ RGE F+T
Sbjct: 113 DFRGEPFET 121


>sp|UVRB_METMA|UVRABC system protein B|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 RGEAFQTL 10
+GE FQTL
Sbjct: 55 KGEPFQTL 62


>sp|TRPB_THEAC|TRYPTOPHAN synthase beta chain|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GEAFQTL 10
GEAF TL
Sbjct: 34 GEAFDTL 40




93|SequenceR|470|461|KDLQDELRGE

>sp|Y1085_PICTO|PUTATIVE adenine deaminase PTO1085|Picrophilus torridus (strain ATCC 700027

Query: 1 KDLQDELR 8
KDL+DEL+
Sbjct: 270 KDLKDELK 277


>sp|Y349_METJA|UNCHARACTERIZED protein MJ0349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DLQDELRGE 10
+L+DELRGE
Sbjct: 43 ELKDELRGE 51


>sp|PYRF_PYRAB|OROTIDINE 5'-phosphate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 KDLQDELRGE 10
+++ DE+RGE
Sbjct: 199 REIYDEIRGE 208


>sp|PURP_METTH|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanothermobacter

Query: 2 DLQDELR 8
D+QDELR
Sbjct: 79 DVQDELR 85


>sp|Y1429_THEAC|UPF0159 protein Ta1429|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 DLQDELRGE 10
DL +EL+GE
Sbjct: 227 DLYEELKGE 235


>sp|PFDA_IGNH4|PREFOLDIN subunit alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KDLQDELR 8
K LQDELR
Sbjct: 32 KLLQDELR 39


>sp|MPTA_METB6|GTP cyclohydrolase MptA|Methanoregula boonei (strain DSM 21154

Query: 2 DLQDELRGE 10
+LQDEL G+
Sbjct: 313 ELQDELNGD 321




94|SequenceR|475|466|AWHDYKDLQD

>sp|Y1986_ARCFU|UNCHARACTERIZED protein AF_1986|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 WHDYKDLQD 10
WH YK+L++
Sbjct: 13 WHRYKELEE 21


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 3 HDYKDLQD 10
HDY+D+ D
Sbjct: 540 HDYQDIND 547


>sp|SYP_PYRAR|PROLINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 HDYKDL 8
HDYKDL
Sbjct: 129 HDYKDL 134


>sp|RL32_METKA|LARGE ribosomal subunit protein eL32|Methanopyrus kandleri (strain AV19

Query: 2 WHDYKDL 8
WH YK L
Sbjct: 33 WHRYKKL 39


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 2 WHDY 5
WHDY
Sbjct: 25 WHDY 28


>sp|AMT2_METJA|AMMONIUM transporter Amt2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WHDY 5
WHDY
Sbjct: 176 WHDY 179


>sp|COFG_METAC|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 WHDYKDLQ 9
W D +DLQ
Sbjct: 267 WPDVRDLQ 274


>sp|Y1054_METJA|UNCHARACTERIZED protein MJ1054|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WHDYKDLQD 10
W +YKD+ +
Sbjct: 652 WENYKDIAE 660


>sp|Y762_ARCFU|UNCHARACTERIZED protein AF_0762|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AWHDYKDLQ 9
+W DY ++Q
Sbjct: 45 SWSDYANVQ 53


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 3 HDYKDLQD 10
HD K+L+D
Sbjct: 515 HDVKNLED 522


>sp|CEDB_SULAC|DNA import protein CedB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 DYKDLQD 10
DY+DL D
Sbjct: 91 DYRDLSD 97


>sp|COBQ_METPE|PROBABLE cobyric acid synthase|Methanosphaerula palustris (strain ATCC

Query: 3 HDYKDLQ 9
H YKD+Q
Sbjct: 92 HPYKDVQ 98


>sp|HCP_METAR|HYDROXYLAMINE reductase|Methanocella arvoryzae (strain DSM 22066

Query: 3 HDYKDLQ 9
HD KDL+
Sbjct: 244 HDLKDLE 250


>sp|RS12_METMP|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 WHDYK 6
WH YK
Sbjct: 25 WHHYK 29


>sp|RS12_METM7|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 WHDYK 6
WH YK
Sbjct: 25 WHHYK 29


>sp|RS12_METM5|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 WHDYK 6
WH YK
Sbjct: 25 WHHYK 29


>sp|RS12_META3|SMALL ribosomal subunit protein uS12|Methanococcus aeolicus (strain

Query: 2 WHDYK 6
WH YK
Sbjct: 25 WHHYK 29


>sp|COFG_METBF|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 WHDYKDLQ 9
W D K+LQ
Sbjct: 273 WPDIKELQ 280


>sp|SOR_ACIAM|SULFUR oxygenase/reductase|Acidianus ambivalens (Desulfurolobus

Query: 2 WHDYKDLQD 10
W D+KD ++
Sbjct: 80 WKDWKDHEE 88


>sp|NIKR1_METTH|PUTATIVE nickel-responsive regulator 1|Methanothermobacter

Query: 3 HDYKDL 8
HDY+D+
Sbjct: 74 HDYEDI 79


>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AWHDYKDLQD 10
AW + +DL+D
Sbjct: 981 AWENDEDLKD 990


>sp|COFD_METLZ|2-PHOSPHO-L-LACTATE transferase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 WHDYKDLQD 10
W YKD+ D
Sbjct: 253 WQVYKDVVD 261


>sp|HCP_METVS|HYDROXYLAMINE reductase|Methanococcus vannielii (strain ATCC 35089

Query: 3 HDYKDLQ 9
HD KDL+
Sbjct: 239 HDLKDLE 245


>sp|KAD6_METS5|PUTATIVE adenylate kinase|Metallosphaera sedula (strain ATCC 51363

Query: 2 WHDYKDLQD 10
W D D+QD
Sbjct: 163 WLDLPDVQD 171


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HDYKDLQ 9
HD KDL+
Sbjct: 235 HDLKDLE 241




95|SequenceR|480|471|DEFRDAWHDY

>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 EFRDAWHDY 10
E+RD+W Y
Sbjct: 267 EYRDSWTSY 275


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DEFRDAWH 8
+EFRD W
Sbjct: 185 EEFRDKWQ 192


>sp|Y132_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 2 EFRDAWHDY 10
EFRD W Y
Sbjct: 3 EFRDVWFWY 11


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 EFRDAW 7
E+RDAW
Sbjct: 185 EYRDAW 190


>sp|ILVC_METVS|KETOL-ACID reductoisomerase (NADP(+))|Methanococcus vannielii (strain ATCC

Query: 3 FRDAWHD 9
F++ WHD
Sbjct: 243 FKNMWHD 249


>sp|Y1996_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 2 EFRDAWHDY 10
E RD W+ Y
Sbjct: 11 EIRDLWYTY 19


>sp|SURE_METBU|5'-NUCLEOTIDASE SurE|Methanococcoides burtonii (strain DSM 6242

Query: 1 DEFRDAWHDY 10
D+ RD HD+
Sbjct: 140 DDLRDFQHDF 149


>sp|PSTB2_HALSA|PHOSPHATE import ATP-binding protein PstB|Halobacterium salinarum (strain

Query: 1 DEFRDAWHDY 10
++ +DAW DY
Sbjct: 69 EQLQDAWTDY 78


>sp|KATG1_HALMA|CATALASE-PEROXIDASE 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 DEFRDAWH 8
D+F DAWH
Sbjct: 712 DDFVDAWH 719


>sp|PYRH_PYRIL|URIDYLATE kinase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DEFRDAW 7
+EF DAW
Sbjct: 90 EEFLDAW 96


>sp|PYRH_PYRCJ|URIDYLATE kinase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 DEFRDAW 7
+EF DAW
Sbjct: 90 EEFLDAW 96


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 3 FRDAWHD 9
F AWHD
Sbjct: 16 FEGAWHD 22


>sp|Y1216_PYRHO|PROBABLE ABC transporter permease protein|Pyrococcus horikoshii (strain ATCC

Query: 2 EFRDAWHDY 10
+F + W+DY
Sbjct: 201 QFTNIWNDY 209


>sp|THI4_METBU|THIAMINE thiazole synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DEFRDAWHDY 10
DEF ++H+Y
Sbjct: 85 DEFGISYHEY 94


>sp|EF2_SULTO|ELONGATION factor 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EFRDAW 7
E++DAW
Sbjct: 185 EYKDAW 190


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 EFRDAWHDY 10
++RD+W Y
Sbjct: 267 KYRDSWKAY 275


>sp|EF2_METJA|ELONGATION factor 2|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DEFRDAW 7
+EF+D W
Sbjct: 185 EEFKDKW 191


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 DEFRDAW 7
+EF+D W
Sbjct: 185 EEFKDKW 191


>sp|Y130_PYRAB|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus abyssi (strain GE5

Query: 2 EFRDAWHDY 10
EF+D W Y
Sbjct: 3 EFKDVWFWY 11


>sp|GUOP_HALLT|GUANOSINE phosphorylase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DEFRDAWHD 9
DE+ D W+D
Sbjct: 163 DEYVDDWND 171


>sp|NEP_NATMA|HALOLYSIN-LIKE extracellular serine protease Nep|Natrialba magadii

Query: 1 DEFRDAWHD 9
DE RD HD
Sbjct: 374 DELRDHLHD 382


>sp|RL18E_HALSA|LARGE ribosomal subunit protein eL18|Halobacterium salinarum (strain

Query: 1 DEFRDAWHD 9
D D WHD
Sbjct: 21 DSGADVWHD 29


>sp|RL18E_HALS3|LARGE ribosomal subunit protein eL18|Halobacterium salinarum (strain

Query: 1 DEFRDAWHD 9
D D WHD
Sbjct: 21 DSGADVWHD 29


>sp|GLME_HALMA|GLUTAMATE mutase epsilon subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 DEFRDAWH 8
++ RD WH
Sbjct: 17 NDLRDNWH 24


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 1 DEFRDAW 7
+EF+D W
Sbjct: 707 EEFKDEW 713


>sp|HBCL2_METS5|4-HYDROXYBUTYRATE--COA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 1 DEFRDAW 7
+ FRD W
Sbjct: 414 ESFRDGW 420


>sp|GAD_PICTO|D-GLUCONATE/D-GALACTONATE dehydratase|Picrophilus torridus (strain ATCC 700027

Query: 1 DEFRDAWHDY 10
+ F D+W D+
Sbjct: 325 ESFEDSWPDW 334


>sp|PHAE_HALMT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloferax mediterranei (strain ATCC 33500

Query: 1 DEFRDAW 7
+EFRD W
Sbjct: 90 NEFRDIW 96


>sp|PYRH_PYRNV|URIDYLATE kinase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 DEFRDAWHDY 10
+EF +AW +
Sbjct: 90 EEFLEAWRSH 99


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DEFRDAWH 8
DE RD W
Sbjct: 468 DELRDNWQ 475


>sp|DDH_HALMT|D-2-HYDROXYACID dehydrogenase|Haloferax mediterranei (strain ATCC 33500

Query: 3 FRDAWHDY 10
+RDA HD+
Sbjct: 113 YRDAQHDH 120


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DEFRDAWH 8
DE RD W
Sbjct: 468 DELRDNWQ 475


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 1 DEFRDAWHD 9
D+FRD +D
Sbjct: 271 DQFRDGEYD 279




96|SequenceR|485|476|FYLPLDEFRD

>sp|IF2P_CALMQ|PROBABLE translation initiation factor IF-2|Caldivirga maquilingensis

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 288 PLDEMRD 294


>sp|IF2P_PYRIL|PROBABLE translation initiation factor IF-2|Pyrobaculum islandicum (strain

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 287 PLDEMRD 293


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 286 PLDEIRD 292


>sp|IF2P_THESM|PROBABLE translation initiation factor IF-2|Thermococcus sibiricus (strain

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 286 PLDEIRD 292


>sp|IF2P_METKA|PROBABLE translation initiation factor IF-2|Methanopyrus kandleri (strain

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 290 PLDEMRD 296


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 845 PLDEMRD 851


>sp|IF2P_PYRFU|PROBABLE translation initiation factor IF-2|Pyrococcus furiosus (strain ATCC

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 673 PLDEIRD 679


>sp|MDH_PYRHO|MALATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 YLPLDEFRD 10
++PL+EF++
Sbjct: 290 FIPLEEFKE 298


>sp|IF2P_PYRAB|PROBABLE translation initiation factor IF-2|Pyrococcus abyssi (strain GE5 /

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 681 PLDEIRD 687


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 833 PLDEIRD 839


>sp|IF2P_METS3|PROBABLE translation initiation factor IF-2|Methanobrevibacter smithii

Query: 3 LPLDEFRD 10
LPL+E RD
Sbjct: 285 LPLEEMRD 292


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 4 PLDEFRD 10
PLDE RD
Sbjct: 733 PLDEIRD 739


>sp|SMC_THEAC|CHROMOSOME partition protein Smc|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YLPLDEFRD 10
+LPL++ RD
Sbjct: 558 FLPLNKMRD 566


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 2 YLPLDEF 8
Y+P DEF
Sbjct: 560 YIPQDEF 566


>sp|RS4E_STAMF|SMALL ribosomal subunit protein eS4|Staphylothermus marinus (strain ATCC

Query: 2 YLPLDE 7
Y+PLDE
Sbjct: 181 YIPLDE 186


>sp|RS19_PYRNV|SMALL ribosomal subunit protein uS19|Pyrobaculum neutrophilum (strain

Query: 3 LPLDEF 8
LP+DEF
Sbjct: 42 LPMDEF 47


>sp|KU_ARCFU|NON-HOMOLOGOUS end joining protein Ku|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LPLDEFRD 10
L L+EFRD
Sbjct: 203 LKLEEFRD 210


>sp|SCAF_METTH|DUF35 domain-containing scaffold protein|Methanothermobacter

Query: 4 PLDEFRD 10
P DEF+D
Sbjct: 66 PTDEFKD 72


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 YLPLDEF 8
Y+P DEF
Sbjct: 559 YIPEDEF 565


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YLPLDEF 8
Y+P DEF
Sbjct: 561 YIPHDEF 567


>sp|GALE_METJA|PUTATIVE UDP-glucose 4-epimerase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 YLPLDE 7
YLP+DE
Sbjct: 125 YLPVDE 130


>sp|TSR3_THEAC|16S rRNA aminocarboxypropyltransferase|Thermoplasma acidophilum (strain

Query: 4 PLDEFRD 10
PLDE+R+
Sbjct: 143 PLDEYRE 149


>sp|RNZ_METM5|RIBONUCLEASE Z|Methanococcus maripaludis (strain C5 /

Query: 3 LPLDEFRD 10
+PL+EF D
Sbjct: 211 IPLNEFAD 218


>sp|Y2292_ARCFU|UNCHARACTERIZED protein AF_2292|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 LPLDEFRD 10
LPL E RD
Sbjct: 136 LPLSELRD 143


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 PLDEFR 9
PLDEF+
Sbjct: 282 PLDEFK 287


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 YLPLDEF 8
Y P+DEF
Sbjct: 179 YCPVDEF 185


>sp|Y995_METJA|UNCHARACTERIZED protein MJ0995|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YLPLDEFR 9
Y+P+D F+
Sbjct: 106 YIPIDNFK 113


>sp|NOP10_THEAC|RIBOSOME biogenesis protein Nop10|Thermoplasma acidophilum (strain ATCC

Query: 2 YLPLDEFR 9
Y P+D FR
Sbjct: 35 YSPVDRFR 42


>sp|SYL1_METS5|LEUCINE--TRNA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 4 PLDEFR 9
PLDEF+
Sbjct: 885 PLDEFK 890




97|SequenceR|490|481|GHFTMFYLPL

>sp|Y334_ARCFU|UNCHARACTERIZED protein AF_0334|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HFTMFY 7
HFT+FY
Sbjct: 27 HFTIFY 32


>sp|PYRK_ARCFU|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Archaeoglobus fulgidus

Query: 1 GHFTMFYLP 9
G F M Y+P
Sbjct: 30 GQFVMVYVP 38


>sp|PYRK_METJA|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocaldococcus

Query: 1 GHFTMFYLP 9
G F M +LP
Sbjct: 33 GQFAMLWLP 41


>sp|TRM56_ARCFU|TRNA (cytidine(56)-2'-O)-methyltransferase|Archaeoglobus fulgidus

Query: 2 HFTMFYLPL 10
H TM+ +PL
Sbjct: 78 HLTMYGIPL 86


>sp|RS13_METAR|SMALL ribosomal subunit protein uS13|Methanocella arvoryzae (strain DSM

Query: 2 HFTMFYLP 9
H TM YLP
Sbjct: 113 HATMGYLP 120


>sp|SYA_METKA|ALANINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 HFTMFYL 8
HFT+F++
Sbjct: 140 HFTLFHM 146


>sp|TRM56_IGNH4|TRNA (cytidine(56)-2'-O)-methyltransferase|Ignicoccus hospitalis

Query: 2 HFTMFYLPL 10
H TM+ LP+
Sbjct: 80 HLTMYGLPV 88


>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 HFTMFYLP 9
H+ FY+P
Sbjct: 272 HYVDFYMP 279


>sp|POK_METHJ|PANTOATE kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GHFTMFYLPL 10
GH + ++LP+
Sbjct: 12 GHISGYFLPV 21


>sp|HIS3_METST|PHOSPHORIBOSYL-AMP cyclohydrolase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 GHFTMFYLPL 10
GH++ FY L
Sbjct: 97 GHYSCFYKKL 106


>sp|POK_THEKO|PANTOATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GHFTMFYLPL 10
H T F++P+
Sbjct: 9 AHITAFFVPV 18




98|SequenceR|495|486|RISQQGHFTM

>sp|MCH_METAR|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocella arvoryzae (strain DSM 22066

Query: 1 RISQQGHFTM 10
RISQ G+F M
Sbjct: 99 RISQDGYFAM 108


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus (strain

Query: 6 GHFTM 10
GHFTM
Sbjct: 166 GHFTM 170


>sp|Y500_PYRAB|UPF0173 metal-dependent hydrolase PYRAB05000|Pyrococcus abyssi (strain GE5

Query: 6 GHFTM 10
GHFTM
Sbjct: 165 GHFTM 169


>sp|Y1764_PYRFU|UPF0173 metal-dependent hydrolase PF1764|Pyrococcus furiosus (strain ATCC

Query: 6 GHFTM 10
GHFTM
Sbjct: 165 GHFTM 169


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 6 GHFTM 10
GHFTM
Sbjct: 165 GHFTM 169


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain DSM

Query: 6 GHFTM 10
GHFTM
Sbjct: 165 GHFTM 169


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis (strain

Query: 6 GHFTM 10
GHFTM
Sbjct: 164 GHFTM 168


>sp|Y1314_THEON|UPF0173 metal-dependent hydrolase TON_1314|Thermococcus onnurineus (strain

Query: 6 GHFTM 10
GHFTM
Sbjct: 164 GHFTM 168


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 6 GHFTM 10
GHFTM
Sbjct: 174 GHFTM 178




99|SequenceR|500|491|TDIVTRISQQ

>sp|SYV_PICTO|VALINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 TDIVTRISQQ 10
+D TRISQ+
Sbjct: 137 SDFSTRISQE 146


>sp|RPO2_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Sulfolobus acidocaldarius (strain ATCC

Query: 2 DIVTRISQQ 10
D++ RIS+Q
Sbjct: 497 DVIRRISEQ 505


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 TDIVTRISQ 9
TDI TRIS+
Sbjct: 229 TDISTRISR 237


>sp|DNLI_METB6|DNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 IVTRISQQ 10
++TRI+QQ
Sbjct: 80 VITRINQQ 87


>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 TDIVTRISQQ 10
T +VTRIS +
Sbjct: 346 THVVTRISSE 355




100|SequenceR|505|496|VAHQMTDIVT

>sp|GCSH_PICTO|PROBABLE glycine cleavage system H|Picrophilus torridus (strain ATCC

Query: 3 HQMTDIV 9
HQ+TDIV
Sbjct: 34 HQLTDIV 40


>sp|KAD6_METMA|PUTATIVE adenylate kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VAHQMTDIV 9
+AH +TDIV
Sbjct: 94 LAHYITDIV 102


>sp|GLNA_METVO|GLUTAMINE synthetase|Methanococcus voltae

Query: 2 AHQMTDI 8
AHQ++DI
Sbjct: 267 AHQLSDI 273


>sp|KAD6_METAC|PUTATIVE adenylate kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VAHQMTDIV 9
+AH +TDIV
Sbjct: 84 LAHYITDIV 92


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAHQMTDIVT 10
V H +T++VT
Sbjct: 293 VEHTITEVVT 302


>sp|KDGA_SULTO|2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE/2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE aldolase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VAHQMTDIVT 10
+ +QM D++T
Sbjct: 143 IVYQMKDLIT 152




101|SequenceR|510|501|IDYVYVAHQM

>sp|Y891_STAMF|UPF0173 metal-dependent hydrolase Smar_0891|Staphylothermus marinus

Query: 1 IDYVYVAH 8
IDY++V H
Sbjct: 49 IDYIFVTH 56


>sp|Y1493_THEPD|UPF0173 metal-dependent hydrolase Tpen_1493|Thermofilum pendens (strain

Query: 1 IDYVYVAH 8
+DY++V H
Sbjct: 49 VDYIFVTH 56


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 IDYVYVAHQM 10
+DY Y+A Q+
Sbjct: 90 VDYGYLARQL 99


>sp|DNLI_SACI7|DNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACI6|DNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACI4|DNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACI3|DNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACI2|DNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACI1|DNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACSH|DNA ligase|Saccharolobus shibatae (strain ATCC 51178

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|DNLI_SACS2|DNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DYVYVAHQM 10
DYV +AH +
Sbjct: 380 DYVKIAHHI 388


>sp|Y746_HALSA|UPF0229 protein VNG_0746C|Halobacterium salinarum (strain ATCC 700922

Query: 2 DYVYVAH 8
++VY+AH
Sbjct: 304 EFVYIAH 310


>sp|AMT3_ARCFU|AMMONIUM transporter Amt3|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DYVYVAHQM 10
DY +VA QM
Sbjct: 86 DYGFVAFQM 94


>sp|HIS8_METPE|HISTIDINOL-PHOSPHATE aminotransferase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 3 YVYVAH 8
YVY AH
Sbjct: 15 YVYAAH 20


>sp|ARCS_METJA|ARCHAEOSINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DYVYVAH 8
DY+ +AH
Sbjct: 373 DYIVIAH 379




102|SequenceR|515|506|IIVHCIDYVY

>sp|PUR8_ARCFU|ADENYLOSUCCINATE lyase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIVHCIDYVY 10
+IVH IDY Y
Sbjct: 1 MIVHPIDYRY 10


>sp|PUR8_PYRHO|ADENYLOSUCCINATE lyase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 VHCIDYVY 10
VH IDY Y
Sbjct: 3 VHPIDYRY 10


>sp|PUR8_PYRAB|ADENYLOSUCCINATE lyase|Pyrococcus abyssi (strain GE5 /

Query: 3 VHCIDYVY 10
VH IDY Y
Sbjct: 3 VHPIDYRY 10


>sp|PUR8_METJA|ADENYLOSUCCINATE lyase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VHCIDYVY 10
VH IDY Y
Sbjct: 15 VHPIDYRY 22


>sp|Y592_METVS|UPF0200 protein Mevan_0592|Methanococcus vannielii (strain ATCC 35089

Query: 1 IIVHCIDYVY 10
I+V C+ Y++
Sbjct: 67 IVVPCLKYIF 76


>sp|KPYK_PYRAE|PYRUVATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 IVHCIDYV 9
+V C DYV
Sbjct: 243 LVQCSDYV 250


>sp|GLKA_THEKO|ADP-DEPENDENT glucose/glucosamine kinase|Thermococcus kodakarensis (strain ATCC

Query: 4 HCIDYVY 10
+CI Y+Y
Sbjct: 172 NCIHYIY 178


>sp|GLKA_PYRFU|ADP-DEPENDENT glucose/glucosamine kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HCIDYVY 10
+CI Y+Y
Sbjct: 173 NCIHYIY 179


>sp|PYRC_PYRAE|DIHYDROOROTASE aerophilum (strain ATCC 51768

Query: 1 IIVHCIDYVY 10
+++HC D Y
Sbjct: 156 LVLHCEDPAY 165




103|SequenceR|520|511|FQLNDIIVHC

>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 QLNDIIVH 9
++ND+IVH
Sbjct: 566 KVNDVIVH 573


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 QLNDIIVH 9
++ND+IVH
Sbjct: 566 KVNDVIVH 573


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 QLNDIIVH 9
++ND+IVH
Sbjct: 566 KVNDVIVH 573


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 QLNDIIVH 9
++ND+IVH
Sbjct: 566 KVNDVIVH 573


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 QLNDIIVH 9
++ND+IVH
Sbjct: 566 KVNDVIVH 573


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 QLNDIIVH 9
++ND+IVH
Sbjct: 566 KVNDVIVH 573


>sp|AGLG_HALVD|GLUCOSYL-DOLICHYL phosphate glucuronosyltransferase|Haloferax volcanii (strain ATCC

Query: 3 LNDIIVHC 10
++D+++HC
Sbjct: 56 IDDVVLHC 63


>sp|TRPB1_PYRFU|TRYPTOPHAN synthase beta chain 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 QLNDIIVHC 10
QL D+IV C
Sbjct: 217 QLPDVIVAC 225


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 QLNDIIVH 9
++ND+I+H
Sbjct: 566 KVNDVIIH 573


>sp|Y623_METJA|PROBABLE metallophosphoesterase MJ0623|Methanocaldococcus jannaschii

Query: 5 DIIVHC 10
D+I+HC
Sbjct: 63 DLIIHC 68


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 1 FQLNDIIVHC 10
+QLN I HC
Sbjct: 182 YQLNSWIDHC 191


>sp|ARADH_HALVD|L-ARABINOSE 1-dehydrogenase (NAD(P)(+))|Haloferax volcanii (strain ATCC 29605

Query: 1 FQLNDIIVH 9
F+ +DI+VH
Sbjct: 55 FEGHDIVVH 63


>sp|NPD_CALMQ|NAD-DEPENDENT protein deacetylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 5 DIIVHC 10
D+++HC
Sbjct: 231 DVVLHC 236


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 3 LNDIIVH 9
LND+++H
Sbjct: 235 LNDVLLH 241




104|SequenceR|525|516|EHGMMFQLND

>sp|QUED_PYRAB|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Pyrococcus abyssi

Query: 1 EHGMMFQLN 9
EHGM+F N
Sbjct: 51 EHGMIFDFN 59


>sp|Y1637_METJA|UNCHARACTERIZED protein MJ1637|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GMMFQLND 10
G+M QLND
Sbjct: 23 GIMVQLND 30


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EHGMMFQL 8
+H MMF+L
Sbjct: 212 DHAMMFEL 219


>sp|MCRB_METFE|METHYL-COENZYME M reductase subunit beta|Methanothermus fervidus

Query: 1 EHGMMFQLND 10
EH MF++ D
Sbjct: 219 EHTAMFEMGD 228


>sp|TRUA_METBU|TRNA pseudouridine synthase A|Methanococcoides burtonii (strain DSM

Query: 2 HGMMFQLND 10
HG QLND
Sbjct: 15 HGSQVQLND 23


>sp|CARA_SULTO|CARBAMOYL phosphate synthase small chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 EHGMMFQLN 9
+HG+++QL+
Sbjct: 195 KHGILYQLH 203


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 EHGMMF 6
EHGM+F
Sbjct: 473 EHGMIF 478


>sp|CARA_SULAC|CARBAMOYL phosphate synthase small chain|Sulfolobus acidocaldarius (strain

Query: 1 EHGMMFQL 8
+HG+++QL
Sbjct: 194 KHGILYQL 201


>sp|MCRG_METFE|METHYL-COENZYME M reductase subunit gamma|Methanothermus fervidus

Query: 1 EHGMMFQL 8
E+GMMF +
Sbjct: 164 ENGMMFDM 171


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 55 QHGEVFVLDD 64


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 55 QHGEVFVLDD 64


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 55 QHGEVFVLDD 64


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 55 QHGEVFVLDD 64


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 55 QHGEVFVLDD 64


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 54 QHGEVFVLDD 63


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 55 QHGEVFVLDD 64


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 54 QHGEVFVLDD 63


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 54 QHGEVFVLSD 63


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 54 QHGEVFVLHD 63


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EHGMMFQLND 10
+HG +F L+D
Sbjct: 54 QHGEVFVLDD 63




105|SequenceR|530|521|DTSLQEHGMM

>sp|SYL_HALSA|LEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DTSLQEHG 8
D SLQ+HG
Sbjct: 803 DQSLQQHG 810


>sp|AROA_METPE|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanosphaerula palustris (strain

Query: 1 DTSLQEHG 8
D +LQ+HG
Sbjct: 2 DQTLQQHG 9


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DTSLQEHGM 9
DT + EHG+
Sbjct: 524 DTGIGEHGI 532


>sp|CARA_PYRAE|CARBAMOYL phosphate synthase small chain|Pyrobaculum aerophilum (strain ATCC

Query: 4 LQEHGMM 10
L+EHG+M
Sbjct: 113 LREHGVM 119




106|SequenceR|535|526|QAAIRDTSLQ

***** No hits found ******


107|SequenceR|540|531|GIIYDQAAIR

>sp|Y1030_METLZ|UPF0210 protein Mlab_1030|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 GIIYDQAAI 9
GII D+AAI
Sbjct: 384 GIIADEAAI 392


>sp|Y2269_METMJ|UPF0210 protein Memar_2269|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 GIIYDQAAI 9
GII D+AAI
Sbjct: 384 GIIADEAAI 392


>sp|Y2657_METHJ|UPF0210 protein Mhun_2657|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 GIIYDQAAI 9
GII D+AAI
Sbjct: 384 GIIADEAAI 392


>sp|TRMBR_HALSA|HTH-TYPE sugar sensing transcriptional regulator|Halobacterium salinarum

Query: 1 GIIYDQAAI 9
G+I+DQ+A+
Sbjct: 222 GVIFDQSAL 230


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 1 GIIYDQAAI 9
GII D+AAI
Sbjct: 384 GIIADEAAI 392


>sp|OTC_METKA|ORNITHINE carbamoyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 IIYDQAAIR 10
+IYDQA R
Sbjct: 291 VIYDQAENR 299


>sp|MBHLA_PYRFU|MEMBRANE-BOUND hydrogenase subunit alpha|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GIIYDQAAIR 10
G +YD+ A+R
Sbjct: 259 GDVYDRMAVR 268


>sp|Y162_ARCFU|UNCHARACTERIZED protein AF_0162|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GIIYDQA 7
G+IYD A
Sbjct: 65 GVIYDDA 71


>sp|PURQ_THEVO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GIIYDQAAI 9
G+IYD++ I
Sbjct: 107 GLIYDRSKI 115




108|SequenceR|545|536|FKRFVGIIYD

>sp|TRUB_METJA|PROBABLE tRNA pseudouridine synthase B|Methanocaldococcus jannaschii (strain

Query: 1 FKRFVGIIY 9
FK F G IY
Sbjct: 128 FKEFTGRIY 136


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 KRFVGIIY 9
KR++GI++
Sbjct: 372 KRYIGILF 379


>sp|Y193_SACS2|PROTEIN SSO0193|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 2 KRFVGIIY 9
++FVGI++
Sbjct: 77 RKFVGIVF 84


>sp|Y855_SACI1|PROTEIN YN1551_0855|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|Y2104_SACI2|PROTEIN LS215_2104|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|Y2063_SACI7|PROTEIN YG5714_2063|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|Y2019_SACI3|PROTEIN M1627_2019|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|Y1949_SACI6|PROTEIN M164_1949|Saccharolobus islandicus (strain M.16.4 /

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|Y1941_SACI4|PROTEIN M1425_1941|Saccharolobus islandicus (strain M.14.25 /

Query: 2 KRFVGIIY 9
KRF GII+
Sbjct: 191 KRFHGIIF 198


>sp|TRUB_THEAC|PROBABLE tRNA pseudouridine synthase B|Thermoplasma acidophilum (strain

Query: 1 FKRFVGIIY 9
FK+F G IY
Sbjct: 90 FKKFTGRIY 98


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 4 FVGIIY 9
FVG+IY
Sbjct: 987 FVGVIY 992


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 4 FVGIIY 9
FVG+IY
Sbjct: 469 FVGVIY 474


>sp|ARFB_METTH|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanothermobacter

Query: 3 RFVGIIY 9
RF+G++Y
Sbjct: 59 RFLGVLY 65


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 4 FVGIIY 9
FVG+IY
Sbjct: 1058 FVGVIY 1063


>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 FKRFVGIIY 9
+KRF G+++
Sbjct: 161 YKRFEGVVF 169


>sp|KPYK_THELN|PYRUVATE kinase|Thermococcus litoralis (strain ATCC 51850

Query: 4 FVGIIYD 10
FVG +YD
Sbjct: 195 FVGSVYD 201


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 FKRFVGIIY 9
FK F G IY
Sbjct: 88 FKEFTGKIY 96


>sp|TRUB_SULTO|PROBABLE tRNA pseudouridine synthase B|Sulfurisphaera tokodaii (strain DSM

Query: 3 RFVGIIY 9
+F+GIIY
Sbjct: 132 KFIGIIY 138


>sp|Y077_METJA|UNCHARACTERIZED protein MJ0077|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KRFVGIIYD 10
KR++ I++D
Sbjct: 260 KRYISILFD 268




109|SequenceR|550|541|NNDTAFKRFV

>sp|CAS1D_METHJ|CRISPR-ASSOCIATED endonuclease Cas1 4|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 NDTAFKRFV 10
NDTAFK+++
Sbjct: 288 NDTAFKKYL 296


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NNDTAFKRFV 10
+N TAFKR++
Sbjct: 230 SNKTAFKRYI 239


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 DTAFKRFV 10
D AF+RFV
Sbjct: 150 DPAFERFV 157


>sp|TRUA_METTH|TRNA pseudouridine synthase A|Methanothermobacter thermautotrophicus

Query: 1 NNDTAFKRFV 10
+++ AFKRF+
Sbjct: 233 HDEYAFKRFI 242


>sp|PCKG_SACS2|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 NNDTAFKRFV 10
+N+T F RFV
Sbjct: 171 SNNTKFLRFV 180




110|SequenceR|555|546|LTVHCNNDTA

>sp|CIMA_METTH|PUTATIVE (R)-citramalate synthase CimA|Methanothermobacter

Query: 1 LTVHCNND 8
L+VHC+ND
Sbjct: 188 LSVHCHND 195


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 199 ISVHCHND 206


>sp|LEU1_METTH|PROBABLE 2-isopropylmalate synthase|Methanothermobacter thermautotrophicus

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 202 ISVHCHND 209


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 210 ISVHCHND 217


>sp|LEU1_SULTO|2-ISOPROPYLMALATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 200 VSVHCHND 207


>sp|LEU1_SULAC|2-ISOPROPYLMALATE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 200 VSVHCHND 207


>sp|LEU1_SACS2|2-ISOPROPYLMALATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 204 VSVHCHND 211


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 191 VSVHCHND 198


>sp|LEU1_IGNH4|PROBABLE 2-isopropylmalate synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 207 VSVHCHND 214


>sp|CIMA_METJA|(R)-CITRAMALATE synthase CimA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LTVHCNND 8
++VHC+ND
Sbjct: 189 VSVHCHND 196


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 1 LTVHCNND 8
L+VHC++D
Sbjct: 202 LSVHCHDD 209


>sp|HOSA_PYRHO|HOMOCITRATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 LTVHCNND 8
+ VHC+ND
Sbjct: 185 VNVHCHND 192


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LTVHCNND 8
+ VHC+ND
Sbjct: 185 VNVHCHND 192


>sp|CIMA_METAC|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina acetivorans (strain

Query: 1 LTVHCNND 8
+++HC+ND
Sbjct: 180 ISIHCHND 187


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 LTVHCNND 8
+ VHC+ND
Sbjct: 206 IDVHCHND 213


>sp|LEU1_ARCFU|PROBABLE 2-isopropylmalate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 LTVHCNND 8
+ VHC+ND
Sbjct: 194 IDVHCHND 201


>sp|CIMA_METMA|PUTATIVE (R)-citramalate synthase CimA|Methanosarcina mazei (strain ATCC

Query: 1 LTVHCNND 8
+++HC+ND
Sbjct: 180 ISIHCHND 187


>sp|AKSA_METJA|HOMOCITRATE synthase AksA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VHCNND 8
VHC+ND
Sbjct: 222 VHCHND 227


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 1 LTVHCNND 8
+ VHC+ND
Sbjct: 206 IDVHCHND 213


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LTVHCNNDTA 10
L V+ NNDT+
Sbjct: 372 LAVYANNDTS 381


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LTVHCNNDTA 10
LTVHC +++
Sbjct: 104 LTVHCTGNSS 113


>sp|CIMA_METMJ|PUTATIVE (R)-citramalate synthase CimA|Methanoculleus marisnigri (strain

Query: 1 LTVHCNND 8
L++HC++D
Sbjct: 192 LSIHCHDD 199


>sp|CIMA_METPE|PUTATIVE (R)-citramalate synthase CimA|Methanosphaerula palustris (strain

Query: 1 LTVHCNND 8
L++HC++D
Sbjct: 193 LSIHCHDD 200


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 1 LTVHCNN 7
+TVHC N
Sbjct: 166 VTVHCEN 172


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 LTVHCNND 8
++VHC++D
Sbjct: 198 ISVHCHDD 205


>sp|GCH1L_METTH|GTP cyclohydrolase 1 type 2|Methanothermobacter thermautotrophicus

Query: 1 LTVHCNNDTA 10
LTVH N D A
Sbjct: 73 LTVHSNWDVA 82


>sp|AKSA_METTH|HOMOCITRATE synthase AksA|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 LTVHCNND 8
+ +HC+ND
Sbjct: 206 IALHCHND 213


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 1 LTVHCNND 8
L +HC++D
Sbjct: 190 LAIHCHDD 197


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LTVHCNNDTA 10
LTVHC + +
Sbjct: 104 LTVHCTGNPS 113


>sp|DTDA_METBF|D-AMINOACYL-TRNA deacylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LTVHCNNDTA 10
LTVHC + +
Sbjct: 115 LTVHCTGNPS 124


>sp|BIOW_METSF|6-CARBOXYHEXANOATE--COA ligase|Methanocaldococcus sp. (strain FS406-22)

Query: 2 TVHCNN 7
T+HC N
Sbjct: 70 TIHCKN 75


>sp|TFS_THEKO|TRANSCRIPTION factor S|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 CNNDTA 10
C NDTA
Sbjct: 74 CGNDTA 79


>sp|TFS_THECE|TRANSCRIPTION factor S|Thermococcus celer

Query: 5 CNNDTA 10
C NDTA
Sbjct: 74 CGNDTA 79




111|SequenceR|560|551|RPHIVLTVHC

>sp|DTDA_METHJ|D-AMINOACYL-TRNA deacylase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RPHIVLTVH 9
RP VLTVH
Sbjct: 76 RPRPVLTVH 84


>sp|FTTA_PYRAB|TRANSCRIPTION termination factor FttA|Pyrococcus abyssi (strain GE5 /

Query: 1 RPHIVLTVH 9
RP V+TVH
Sbjct: 607 RPERVITVH 615


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 2 PHIVLTVHC 10
PH ++ +HC
Sbjct: 383 PHRIVFIHC 391


>sp|FTTA_PYRHO|TRANSCRIPTION termination factor FttA|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 RPHIVLTVH 9
RP ++TVH
Sbjct: 610 RPERIITVH 618


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 1 RPHIVLTVH 9
RP ++TVH
Sbjct: 607 RPERIITVH 615




112|SequenceR|565|556|DDDEKRPHIV

>sp|DADD_METS3|5'-DEOXYADENOSINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 DDEKRPH 8
DDEKR H
Sbjct: 152 DDEKREH 158


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 EKRPHI 9
EKRPH+
Sbjct: 884 EKRPHM 889


>sp|SYV_METMP|VALINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDEKRP 7
DDEKRP
Sbjct: 29 DDEKRP 34


>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DDDEKRPHI 9
DD+ KRP I
Sbjct: 26 DDEIKRPFI 34


>sp|PSB2_PYRNV|PROTEASOME subunit beta 2|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DEKRPHIV 10
DE+ PH++
Sbjct: 113 DEEGPHLI 120


>sp|PSB1_PYRIL|PROTEASOME subunit beta 1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DEKRPHIV 10
DE+ PH++
Sbjct: 113 DEEGPHLI 120


>sp|Y1676_METKA|UPF0216 protein MK1676|Methanopyrus kandleri (strain AV19 /

Query: 4 EKRPHIV 10
E+RPH+V
Sbjct: 35 EERPHVV 41


>sp|Y1636_METMA|UNCHARACTERIZED glycosyltransferase MM_1636|Methanosarcina mazei (strain ATCC

Query: 5 KRPHIV 10
K+PHIV
Sbjct: 206 KKPHIV 211


>sp|GLYA_PYRAE|SERINE hydroxymethyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DEKRPHIV 10
+EKRP+++
Sbjct: 159 EEKRPNLI 166


>sp|PSB2_PYRAE|PROTEASOME subunit beta 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DEKRPHIV 10
DE+ PH++
Sbjct: 113 DEEGPHLI 120


>sp|GLYA_PYRNV|SERINE hydroxymethyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DEKRPHIV 10
+EKRP+++
Sbjct: 159 EEKRPNLI 166


>sp|DKFP_METJA|FRUCTOSE-BISPHOSPHATE aldolase/6-deoxy-5-ketofructose 1-phosphate

Query: 3 DEKRPHIV 10
DEK PH++
Sbjct: 190 DEKDPHLI 197


>sp|GLYA_PYRIL|SERINE hydroxymethyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 DEKRPHIV 10
+EKRP+++
Sbjct: 159 EEKRPNLI 166


>sp|Y1631_METJA|UNCHARACTERIZED protein MJ1631|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KRPHIV 10
KRPHI+
Sbjct: 337 KRPHIL 342


>sp|SYFB_METVS|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 DDEKRPHI 9
D+E RP+I
Sbjct: 99 DNESRPYI 106


>sp|SYR_PYRIL|ARGININE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 DDEKRPHIV 10
DDEKR I+
Sbjct: 216 DDEKRREII 224




113|SequenceR|570|561|TQLEKDDDEK

>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 QLEKDDD 8
Q+E+DDD
Sbjct: 94 QIEEDDD 100




114|SequenceR|575|566|GFISATQLEK

>sp|TRIC_SULTO|PUTATIVE Tricorn-like protease C-terminal subunit|Sulfurisphaera tokodaii

Query: 1 GFISATQLEK 10
GFIS LEK
Sbjct: 709 GFISGLILEK 718


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 GFISATQ 7
GFI ATQ
Sbjct: 320 GFIDATQ 326


>sp|NADK_ARCFU|NAD kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFISATQL 8
GFI ATQ+
Sbjct: 146 GFIVATQI 153


>sp|RFCS_PYRHO|REPLICATION factor C small subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 GFISATQLEK 10
GFI+ +LEK
Sbjct: 333 GFINRNKLEK 342




115|SequenceR|580|571|SAKASGFISA

>sp|DNLI1_METMA|DNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 AKASGFIS 9
A+A+GFIS
Sbjct: 205 ARATGFIS 212


>sp|MOAC_AERPE|PROBABLE cyclic pyranopterin monophosphate synthase|Aeropyrum pernix

Query: 2 AKASGFIS 9
A ASGFIS
Sbjct: 19 AVASGFIS 26


>sp|PHS_HALMA|PUTATIVE pterin-4-alpha-carbinolamine dehydratase|Haloarcula marismortui

Query: 4 ASGFISA 10
ASGF+SA
Sbjct: 37 ASGFLSA 43


>sp|Y1309_METJA|UNCHARACTERIZED protein MJ1309|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 AKASGFISA 10
A++ GFISA
Sbjct: 225 ARSKGFISA 233




116|SequenceR|585|576|NDAEQSAKAS

***** No hits found ******


117|SequenceR|590|581|QLILVNDAEQ

>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 QLILVNDAEQ 10
Q I NDAEQ
Sbjct: 83 QKIKANDAEQ 92




118|SequenceR|595|586|VLKRDQLILV

>sp|Y1161_THESM|UPF0215 protein TSIB_1161|Thermococcus sibiricus (strain DSM 12597

Query: 2 LKRDQLILV 10
+KRD+ ILV
Sbjct: 25 IKRDKTILV 33




119|SequenceR|600|591|KGPGTVLKRD

>sp|RPO3_METMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina mazei (strain ATCC

Query: 1 KGPGTVLKRD 10
+GPGTV RD
Sbjct: 102 EGPGTVYSRD 111


>sp|RPO3_METAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosarcina acetivorans (strain ATCC

Query: 1 KGPGTVLKRD 10
+GPGTV RD
Sbjct: 102 EGPGTVYSRD 111


>sp|AGLB_HALVD|DOLICHYL-MONOPHOSPHOOLIGOSACCHARIDE--PROTEIN glycotransferase AglB|Haloferax volcanii (strain ATCC 29605

Query: 2 GPGTVLKRD 10
GPGTV + D
Sbjct: 583 GPGTVTQWD 591


>sp|MAP2_THEKO|METHIONINE aminopeptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KGPGTVLK 8
KG GTVLK
Sbjct: 68 KGDGTVLK 75


>sp|TRPG_SACS2|ANTHRANILATE synthase component 2|Saccharolobus solfataricus (strain ATCC

Query: 2 GPGTVLKRD 10
GPGT KR+
Sbjct: 54 GPGTPEKRE 62


>sp|GAPOR_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE:FERREDOXIN oxidoreductase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 GPGTVLKR 9
GPG+VL R
Sbjct: 208 GPGSVLLR 215


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GPGTVLK 8
GPG +LK
Sbjct: 16 GPGAILK 22


>sp|PURA_METBU|ADENYLOSUCCINATE synthetase|Methanococcoides burtonii (strain DSM 6242

Query: 2 GPGTVLK 8
GPGTVL
Sbjct: 67 GPGTVLN 73


>sp|YPZ3_METTF|UNCHARACTERIZED protein ORF3'|Methanothermobacter thermautotrophicus

Query: 1 KGPGTVLKR 9
KG G +LKR
Sbjct: 143 KGQGRLLKR 151


>sp|YPV3_METTF|UNCHARACTERIZED protein ORF3|Methanothermobacter thermautotrophicus

Query: 1 KGPGTVLKR 9
KG G +LKR
Sbjct: 123 KGQGRLLKR 131


>sp|TRPG_METTM|ANTHRANILATE synthase component 2|Methanothermobacter marburgensis (strain

Query: 2 GPGTVLKRD 10
GPG +KR+
Sbjct: 60 GPGNPIKRE 68


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 GPGTVLK 8
GPG +LK
Sbjct: 16 GPGAILK 22


>sp|PRNK_PYRHO|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PH0197|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 GPGTVLKR 9
GPG LKR
Sbjct: 148 GPGVELKR 155


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PGTVLKR 9
PGT+L+R
Sbjct: 224 PGTLLRR 230




120|SequenceR|605|596|VQLYRKGPGT

>sp|G6PI_HALSA|PROBABLE glucose-6-phosphate isomerase|Halobacterium salinarum (strain ATCC

Query: 1 VQLYRKGP 8
+QLYR GP
Sbjct: 296 LQLYRAGP 303


>sp|G6PI_HALWD|PROBABLE glucose-6-phosphate isomerase|Haloquadratum walsbyi (strain DSM

Query: 1 VQLYRKGP 8
+QLYR GP
Sbjct: 295 LQLYRAGP 302


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 3 LYRKGPG 9
LYRK PG
Sbjct: 520 LYRKMPG 526


>sp|IDI2_METTP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VQLYRKGP 8
VQL+R GP
Sbjct: 126 VQLHRYGP 133


>sp|COFG_METMA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 YRKGPGT 10
YRK PGT
Sbjct: 321 YRKQPGT 327


>sp|SYE_PYRIL|GLUTAMATE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 QLYRKGPGT 10
++Y+ GPGT
Sbjct: 447 RIYKFGPGT 455


>sp|RL34_METM5|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 2 QLYRKGPGT 10
++YRK PG
Sbjct: 13 KVYRKAPGN 21


>sp|RL34_METM7|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 2 QLYRKGPGT 10
++YRK PG
Sbjct: 13 KVYRKAPGN 21


>sp|RL34_METMP|LARGE ribosomal subunit protein eL34|Methanococcus maripaludis (strain

Query: 2 QLYRKGPGT 10
++YRK PG
Sbjct: 13 KVYRKAPGN 21


>sp|ACDA2_METAC|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanosarcina

Query: 3 LYRKGPGT 10
LY K PGT
Sbjct: 567 LYEKYPGT 574


>sp|FAU1_AERPE|PROBABLE ribonuclease FAU-1|Aeropyrum pernix (strain ATCC 700893

Query: 2 QLYRKGPG 9
+L+R+GPG
Sbjct: 222 RLWREGPG 229


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 1 VQLYRKGPG 9
++ Y KGPG
Sbjct: 172 LETYAKGPG 180


>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QLYRKGPG 9
++YR GPG
Sbjct: 447 RVYRLGPG 454


>sp|Y1851_PYRFU|PUTATIVE HTH-type transcriptional regulatory protein|Pyrococcus furiosus

Query: 1 VQLYRKGPG 9
VQ Y KG G
Sbjct: 156 VQRYEKGEG 164


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 4 YRKGPG 9
YR GPG
Sbjct: 328 YRMGPG 333


>sp|SYE_PYRCJ|GLUTAMATE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 QLYRKGPG 9
++YR GPG
Sbjct: 447 RVYRLGPG 454


>sp|RS15_METTH|SMALL ribosomal subunit protein uS15|Methanothermobacter

Query: 1 VQLYRKGPGT 10
V+LYR+G T
Sbjct: 21 VKLYREGNST 30


>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 QLYRKGPG 9
+Y KGPG
Sbjct: 118 SVYEKGPG 125


>sp|ENDA_PYRNV|TRNA-SPLICING endonuclease|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 QLYRKGPG 9
+Y KGPG
Sbjct: 118 SVYEKGPG 125


>sp|RL19E_KORCO|LARGE ribosomal subunit protein eL19|Korarchaeum cryptofilum (strain

Query: 5 RKGPGT 10
RKGPG+
Sbjct: 66 RKGPGS 71


>sp|ENDA_PYRAE|TRNA-SPLICING endonuclease|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QLYRKGPG 9
+Y KGPG
Sbjct: 118 SVYEKGPG 125


>sp|RS15_THEPD|SMALL ribosomal subunit protein uS15|Thermofilum pendens (strain DSM

Query: 1 VQLYRKG 7
V LYRKG
Sbjct: 36 VSLYRKG 42


>sp|ACDB2_PYRFU|ACETATE--COA ligase [ADP-forming] II subunit|Pyrococcus furiosus (strain ATCC

Query: 1 VQLYRKGPG 9
V +YRKG G
Sbjct: 216 VFVYRKGEG 224




121|SequenceR|610|601|FRNKSVQLYR

>sp|SYDND_METMJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 FRNKSVQLYR 10
F N+S QLY+
Sbjct: 182 FMNQSPQLYK 191


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 FRNKSVQLYR 10
F N+S QLY+
Sbjct: 182 FLNQSPQLYK 191


>sp|SYDND_METHJ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 FRNKSVQLYR 10
F N+S QLY+
Sbjct: 182 FLNQSPQLYK 191


>sp|PUR2_METVS|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 RNKSVQLY 9
+N+SV+LY
Sbjct: 21 KNRSVELY 28


>sp|SYDND_ARCFU|ASPARTATE--TRNA(ASP/ASN) ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FRNKSVQLYR 10
F N+S QLY+
Sbjct: 184 FLNQSPQLYK 193


>sp|Y2595_SACS2|UPF0310 protein SSO2595|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RNKSVQLYR 10
RNK + +YR
Sbjct: 78 RNKGIYIYR 86


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 RNKSVQLYR 10
RNK + +YR
Sbjct: 238 RNKKIDIYR 246




122|SequenceR|615|606|GVDGDFRNKS

>sp|Y433_METJA|UNCHARACTERIZED protein MJ0433|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DGDFRNK 9
DGD++NK
Sbjct: 18 DGDYKNK 24


>sp|RFRNP_METBF|RNA-FREE ribonuclease P|Methanosarcina barkeri (strain Fusaro /

Query: 1 GVDGDFRNK 9
G+ G FRNK
Sbjct: 151 GIIGKFRNK 159


>sp|RFRNP_METAC|RNA-FREE ribonuclease P|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GVDGDFRNK 9
G+ G FRNK
Sbjct: 151 GIIGKFRNK 159


>sp|RFRNP_METMA|RNA-FREE ribonuclease P|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 GVDGDFRNK 9
G+ G FRNK
Sbjct: 151 GIIGKFRNK 159


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 GVDGDFRNKS 10
G++GDF + S
Sbjct: 236 GIEGDFSSSS 245


>sp|APGM_PYRNV|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 DGDFRNK 9
DGDFR K
Sbjct: 311 DGDFRGK 317


>sp|CYAS_METPE|CYSTEATE synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 GVDGDF 6
GVDGD+
Sbjct: 173 GVDGDY 178


>sp|COBS_METKA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 GVDGDFRNKS 10
GV+GDF S
Sbjct: 215 GVNGDFLGAS 224


>sp|NEP1_PYRAE|RIBOSOMAL RNA small subunit methyltransferase|Pyrobaculum aerophilum (strain

Query: 4 GDFRNK 9
GDF+NK
Sbjct: 179 GDFQNK 184


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 VDGDFR 7
+DGDFR
Sbjct: 70 IDGDFR 75


>sp|Y1061_METJA|UNCHARACTERIZED membrane protein MJ1061|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GVDGDFRNK 9
GVDG+ NK
Sbjct: 299 GVDGNKNNK 307


>sp|GATB_METJA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanocaldococcus jannaschii (strain

Query: 1 GVDGDF 6
GVDG+F
Sbjct: 107 GVDGEF 112


>sp|Y3408_METJA|UNCHARACTERIZED protein MJECS08|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 GDFRNK 9
G+FRNK
Sbjct: 408 GEFRNK 413


>sp|Y240_METJA|PUTATIVE adenylate cyclase MJ0240|Methanocaldococcus jannaschii (strain

Query: 1 GVDGDFRN 8
G+D DFR
Sbjct: 40 GIDRDFRE 47


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GVDGDF 6
GV+GDF
Sbjct: 523 GVEGDF 528




123|SequenceR|620|611|ELPFVGVDGD

>sp|MUTS2_PYRFU|DNA-BINDING protein MutS2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELPFVGVDG 9
E+PF VDG
Sbjct: 498 EIPFARVDG 506


>sp|ILVD_METB6|DIHYDROXY-ACID dehydratase|Methanoregula boonei (strain DSM 21154

Query: 1 ELPFVGV 7
ELPF+G+
Sbjct: 33 ELPFIGI 39


>sp|THIE_NATPD|THIAMINE-PHOSPHATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LPFVGVDG 9
LPFVG+ G
Sbjct: 160 LPFVGIGG 167


>sp|Y1387_METJA|PUTATIVE nickel insertion protein|Methanocaldococcus jannaschii (strain

Query: 3 PFVGVDGD 10
PF G+ GD
Sbjct: 6 PFSGISGD 13


>sp|UDGA_SACS2|TYPE-4 uracil-DNA glycosylase|Saccharolobus solfataricus (strain ATCC

Query: 3 PFVGVDG 9
PFVGV G
Sbjct: 54 PFVGVAG 60


>sp|THIE_HALMA|THIAMINE-PHOSPHATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELPFVGVDG 9
++PFVG+ G
Sbjct: 159 DIPFVGIGG 167


>sp|Y3407_METJA|UNCHARACTERIZED protein MJECS07|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPFVGVDGD 10
L FVG +GD
Sbjct: 194 LDFVGKEGD 202


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 1 ELPFVGVDGD 10
+LP +G+D +
Sbjct: 197 DLPLIGLDAE 206


>sp|RS13_THEPD|SMALL ribosomal subunit protein uS13|Thermofilum pendens (strain DSM

Query: 3 PFVGVD 8
PF+GVD
Sbjct: 86 PFLGVD 91


>sp|MJK1_METJA|POTASSIUM channel protein 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LPFVGVDGD 10
+PFV +D D
Sbjct: 131 IPFVIIDSD 139


>sp|G1PDH_CENSY|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Cenarchaeum symbiosum (strain A)

Query: 3 PFVGVDGD 10
PFV + GD
Sbjct: 135 PFVSIKGD 142


>sp|FLUC2_HALMA|FLUORIDE-SPECIFIC ion channel FluC 2|Haloarcula marismortui (strain ATCC 43049

Query: 2 LPFVGVDGD 10
L F GV GD
Sbjct: 51 LTFAGVTGD 59


>sp|PRIS_METTP|DNA primase small subunit PriS|Methanothrix thermoacetophila (strain

Query: 5 VGVDGD 10
+GVDGD
Sbjct: 189 IGVDGD 194


>sp|MRE11_SACS2|DNA double-strand break repair protein|Saccharolobus solfataricus

Query: 2 LPFVGVDGD 10
+PF+ + GD
Sbjct: 77 IPFLSIPGD 85


>sp|ILVD_METMJ|DIHYDROXY-ACID dehydratase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ELPFVGV 7
+LPF+G+
Sbjct: 30 DLPFIGI 36


>sp|SYM_HALMA|METHIONINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 4 FVGVDGD 10
FVG+DG+
Sbjct: 349 FVGIDGN 355


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 1 ELPFVGVDGD 10
ELP G+ GD
Sbjct: 353 ELPGYGITGD 362




124|SequenceR|625|616|SNKNFELPFV

>sp|KAE1B_METST|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 SNKNFELPFV 10
+NK ELP+V
Sbjct: 184 TNKTIELPYV 193


>sp|ENO_METVS|ENOLASE vannielii (strain ATCC 35089

Query: 1 SNKNFELPF 9
+ KNF++PF
Sbjct: 418 AGKNFKIPF 426


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 1 SNKNFELPFV 10
+N N LPF+
Sbjct: 250 ANTNINLPFL 259


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SNKNFELPFV 10
+N N LPF+
Sbjct: 250 ANTNINLPFL 259


>sp|DPOL1_AERPE|DNA polymerase 1|Aeropyrum pernix (strain ATCC 700893

Query: 4 NFELPFV 10
NF+LP++
Sbjct: 402 NFDLPYI 408


>sp|DPOL_DESST|DNA polymerase|Desulfurococcus sp. (strain Tok)

Query: 3 KNFELPFV 10
KN +LP+V
Sbjct: 174 KNIDLPYV 181


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 3 KNFELPFV 10
KN +LP+V
Sbjct: 174 KNIDLPYV 181


>sp|DPOL_PYRWO|DNA polymerase|Pyrococcus woesei

Query: 3 KNFELPFV 10
KN +LP+V
Sbjct: 174 KNIDLPYV 181


>sp|DPOL_PYRFU|DNA polymerase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 KNFELPFV 10
KN +LP+V
Sbjct: 174 KNIDLPYV 181


>sp|TRM56_SULAC|TRNA (cytidine(56)-2'-O)-methyltransferase|Sulfolobus acidocaldarius

Query: 1 SNKNFELPFV 10
++KNF LP +
Sbjct: 52 ASKNFTLPLL 61


>sp|Y1285_METJA|UNCHARACTERIZED protein MJ1285|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NKNFELPF 9
NK FE+PF
Sbjct: 156 NKLFEVPF 163


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 3 KNFELPFV 10
KN +LP+V
Sbjct: 174 KNIDLPYV 181


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 SNKNFELPFV 10
S+KN LPF+
Sbjct: 235 SDKNHLLPFL 244


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 3 KNFELPFV 10
KN +LP+V
Sbjct: 174 KNIDLPYV 181




125|SequenceR|630|621|ISFTLSNKNF

>sp|BRIX_ARCFU|PROBABLE Brix domain-containing ribosomal biogenesis|Archaeoglobus

Query: 1 ISFTLSNKN 9
+SFTLSN N
Sbjct: 72 VSFTLSNVN 80


>sp|AROE_METST|SHIKIMATE dehydrogenase (NADP(+))|Methanosphaera stadtmanae (strain ATCC

Query: 1 ISFTLSNKNF 10
I+FTL NKN
Sbjct: 137 ITFTLLNKNI 146




126|SequenceR|635|626|KNKPPISFTL

>sp|AGOG_THEKO|N-GLYCOSYLASE/DNA lyase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 NKPPISF 8
N+PP+SF
Sbjct: 208 NEPPVSF 214


>sp|AROE_META3|SHIKIMATE dehydrogenase (NADP(+))|Methanococcus aeolicus (strain ATCC

Query: 2 NKPPIS 7
NKPPIS
Sbjct: 204 NKPPIS 209


>sp|IF2G_THEVO|TRANSLATION initiation factor 2 subunit|Thermoplasma volcanium (strain ATCC

Query: 4 PPISFTL 10
PPISF++
Sbjct: 318 PPISFSM 324


>sp|DHOM_PYRHO|HOMOSERINE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NKPPIS 7
NKPPI+
Sbjct: 115 NKPPIA 120




127|SequenceR|640|631|KKLRAKNKPP

>sp|RTCA_AERPE|RNA 3'-terminal phosphate cyclase|Aeropyrum pernix (strain ATCC

Query: 3 LRAKNKPP 10
+RAK +PP
Sbjct: 40 IRAKRRPP 47


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KKLRAKNK 8
KKLR KNK
Sbjct: 302 KKLRVKNK 309


>sp|RFCS1_PYRIL|REPLICATION factor C small subunit|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KKLRAKNKPP 10
KK+RA + PP
Sbjct: 317 KKIRAASLPP 326


>sp|RIFK_STAMF|RIBOFLAVIN kinase|Staphylothermus marinus (strain ATCC 43588

Query: 1 KKLRAKNKPP 10
KKL+AK PP
Sbjct: 53 KKLKAKIIPP 62


>sp|PURQ_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Methanosarcina barkeri (strain Fusaro /

Query: 1 KKLRAKNKP 9
KKL A+ KP
Sbjct: 73 KKLAAEGKP 81




128|SequenceR|645|636|TDDKIKKLRA

>sp|HTPX1_METAC|PROTEASE HtpX homolog 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TDDKIKKLRA 10
TD+++K+LRA
Sbjct: 274 TDERVKRLRA 283


>sp|HTPX1_METMA|PROTEASE HtpX homolog 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TDDKIKKLRA 10
TD+++++LRA
Sbjct: 275 TDERVRRLRA 284


>sp|TFE_HALSA|TRANSCRIPTION factor E|Halobacterium salinarum (strain ATCC 700922

Query: 2 DDKIKKLRA 10
DD+I++LR+
Sbjct: 158 DDRIERLRS 166


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 2 DDKIKKLRA 10
DDKI KLR
Sbjct: 593 DDKISKLRG 601


>sp|IF6_PYRAE|TRANSLATION initiation factor 6|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 TDDKIKKL 8
TDD +KKL
Sbjct: 163 TDDDLKKL 170


>sp|GLMS_METMA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanosarcina mazei (strain ATCC

Query: 2 DDKIKKL 8
DD+IKKL
Sbjct: 296 DDEIKKL 302


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 2 DDKIKKLRA 10
DDKI K+R
Sbjct: 593 DDKISKIRG 601


>sp|NFI_PICTO|BIFUNCTIONAL methyltransferase/endonuclease|Picrophilus torridus (strain ATCC

Query: 2 DDKIKKLR 9
D+KI++LR
Sbjct: 74 DEKIRRLR 81


>sp|AOR_PYRFU|TUNGSTEN-CONTAINING aldehyde ferredoxin oxidoreductase|Pyrococcus furiosus (strain ATCC

Query: 1 TDDKIKKL 8
+DDKIK L
Sbjct: 471 SDDKIKML 478


>sp|SYL2_SACS2|LEUCINE--TRNA ligase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DDKIKKL 8
DDK+KKL
Sbjct: 884 DDKMKKL 890


>sp|Y202_METJA|UNCHARACTERIZED protein MJ0202|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TDDKIKKLR 9
TDD++++LR
Sbjct: 107 TDDELERLR 115




129|SequenceR|650|641|KAVPGTDDKI

>sp|CAPPA_PYRIL|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 KAVPGTDDKI 10
+ +PGT D+I
Sbjct: 321 RLIPGTRDRI 330


>sp|IF2P_PYRHO|PROBABLE translation initiation factor IF-2|Pyrococcus horikoshii (strain

Query: 1 KAVPGTDDK 9
K +PG DDK
Sbjct: 133 KILPGKDDK 141


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 AVPGTDDKI 10
+PG D+KI
Sbjct: 269 GIPGVDEKI 277


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KAVPGTDD 8
KAVPG D+
Sbjct: 44 KAVPGLDE 51


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KAVPGTDD 8
KAVPG D+
Sbjct: 44 KAVPGLDE 51


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KAVPGTDD 8
KAVPG D+
Sbjct: 44 KAVPGLDE 51


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KAVPGTDD 8
KAVPG D+
Sbjct: 44 KAVPGLDE 51


>sp|Y1487_ARCFU|UNCHARACTERIZED protein AF_1487|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 VPGTDDKI 10
VP DDK+
Sbjct: 104 VPADDDKV 111


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 KAVPGTDD 8
KAVPG D+
Sbjct: 44 KAVPGLDE 51


>sp|Y1658_METJA|UNCHARACTERIZED protein MJ1658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KAVPGTDDKI 10
+ +PG+DD I
Sbjct: 81 RVLPGSDDII 90


>sp|SYM_METM7|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 VPGTDDKI 10
+PG DD++
Sbjct: 237 IPGCDDQV 244


>sp|SYM_METM5|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 VPGTDDKI 10
+PG DD++
Sbjct: 237 IPGCDDQV 244


>sp|SYM_METMP|METHIONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 VPGTDDKI 10
+PG DD++
Sbjct: 237 IPGCDDQV 244


>sp|Y1427_HALMA|UNCHARACTERIZED protein rrnAC1427|Haloarcula marismortui (strain ATCC 43049

Query: 2 AVPGTD 7
AVPGTD
Sbjct: 140 AVPGTD 145


>sp|LEU3_SULTO|3-ISOPROPYLMALATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KAVPGTDDK 9
K++PG D K
Sbjct: 99 KSIPGIDTK 107


>sp|HMGCS_ARCFU|HYDROXYMETHYLGLUTARYL-COA synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KAVPGTDD 8
K+VPG D+
Sbjct: 41 KSVPGMDE 48




130|SequenceR|655|646|GSSPKKAVPG

>sp|THII_DESA1|TRNA sulfurtransferase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 SSPKKAVPG 10
+SP++AVPG
Sbjct: 384 ASPEEAVPG 392


>sp|PPS_THEKO|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 GSSPKKAVPG 10
G +P K +PG
Sbjct: 129 GINPTKRIPG 138


>sp|DNAK_HALMT|CHAPERONE protein DnaK|Haloferax mediterranei (strain ATCC 33500

Query: 1 GSSPKKAV 8
GS PKK+V
Sbjct: 332 GSEPKKSV 339


>sp|PPS_THEON|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Thermococcus onnurineus (strain NA1)

Query: 1 GSSPKKAVPG 10
G +P K +PG
Sbjct: 129 GINPTKRIPG 138


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain

Query: 2 SSPKKAVPG 10
S P K+VPG
Sbjct: 6 SGPIKSVPG 14




131|SequenceR|660|651|TAGKKGSSPK

>sp|RS27A_NITMS|SMALL ribosomal subunit protein eS31|Nitrosopumilus maritimus (strain

Query: 2 AGKKGSSP 9
AGKKGSSP
Sbjct: 2 AGKKGSSP 9


>sp|SYM_METJA|METHIONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TAGKKGSSPK 10
TA K+G SP+
Sbjct: 58 TAEKEGKSPE 67


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 3 GKKGSSPK 10
G++GS PK
Sbjct: 233 GREGSEPK 240




132|SequenceR|665|656|ESNQTTAGKK

>sp|THII_SULAC|PROBABLE tRNA sulfurtransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 3 NQTTAGKK 10
NQT GKK
Sbjct: 90 NQTVKGKK 97




133|SequenceR|670|661|QGSCIESNQT

>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 GSCIESNQT 10
GSC E+N T
Sbjct: 812 GSCTEANNT 820


>sp|ANTRA_HALVD|PROBABLE anion import ATP-binding protein|Haloferax volcanii (strain ATCC

Query: 2 GSCIESNQT 10
G+CIES T
Sbjct: 258 GTCIESGPT 266




134|SequenceR|675|666|DPTPAQGSCI

>sp|RF1_METMA|PEPTIDE chain release factor subunit|Methanosarcina mazei (strain ATCC

Query: 1 DPTPAQGSC 9
+P PA G+C
Sbjct: 347 EPAPAAGNC 355


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 1 DPTPAQGSCI 10
DP PA G I
Sbjct: 20 DPKPASGEVI 29


>sp|Y1590_METJA|UNCHARACTERIZED protein MJ1590|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTPAQGSCI 10
P PA G CI
Sbjct: 27 PPPAYGICI 35


>sp|AOCD_METKA|ORNITHINE cyclodeaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 DPTPAQGSC 9
+P PA G C
Sbjct: 86 EPAPADGVC 94


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 DPTPAQGSC 9
DP P G C
Sbjct: 405 DPKPEPGQC 413


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PTPAQGSCI 10
PTPA+G I
Sbjct: 284 PTPARGDSI 292


>sp|NADA_PYRHO|QUINOLINATE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 PTPAQGSC 9
P P++G C
Sbjct: 163 PVPSKGHC 170


>sp|SYS2_METBF|TYPE-2 serine--tRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DPTPAQ 6
DPTPA+
Sbjct: 16 DPTPAK 21


>sp|RF11_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 DPTPAQGSC 9
+P P G+C
Sbjct: 347 EPAPTAGNC 355


>sp|IF6_META3|TRANSLATION initiation factor 6|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 TPAQGSCI 10
TP+ G+CI
Sbjct: 191 TPSVGACI 198


>sp|PDXT_PYRFU|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Pyrococcus furiosus (strain

Query: 1 DPTPAQGSC 9
D PA G+C
Sbjct: 77 DGLPAMGTC 85


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 1 DPTPAQGSCI 10
DPTP C+
Sbjct: 534 DPTPEHLRCV 543




135|SequenceR|684|671|KSRKSTDPQDPTPA

>sp|THIOL_METTH|ACETYL-COA acetyltransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 KSTDPQDPTPA 14
K TD DPTPA
Sbjct: 114 KMTDVVDPTPA 124


>sp|EF2_METTP|ELONGATION factor 2|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 KSRKSTDPQDPTPA 14
++RK P+ PTP+
Sbjct: 712 RTRKGLKPEMPTPS 725


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 RKSTDPQDPTPA 14
R TDP+ P P+
Sbjct: 245 RMKTDPRHPNPS 256


>sp|DCD_SULTO|DCTP deaminase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 KSRKSTDPQDPTPA 14
K+ K DP +P PA
Sbjct: 45 KTDKVFDPDNPDPA 58


>sp|SYE_METS5|GLUTAMATE--TRNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 RKSTDPQDPTPA 14
R T+P+DP P+
Sbjct: 243 RIKTNPEDPDPS 254


>sp|LYSM_SULTO|HTH-TYPE transcriptional regulator LysM|Sulfurisphaera tokodaii (strain

Query: 6 TDPQDPTP 13
T+PQ PTP
Sbjct: 71 TNPQIPTP 78


>sp|GAPN_SACS2|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Saccharolobus solfataricus

Query: 1 KSRKSTDPQDP 11
KS K DP+DP
Sbjct: 330 KSVKVGDPRDP 340


>sp|NDK_PYRFU|NUCLEOSIDE diphosphate kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KSRKSTDPQDPTPA 14
K +TDP+D P
Sbjct: 89 KMAGATDPKDAAPG 102


>sp|BGAL_HALL2|BETA-GALACTOSIDASE BgaH|Haloferax lucentense (strain DSM 14919

Query: 4 KSTDPQDPTPA 14
+S DP PTPA
Sbjct: 191 ESIDPPKPTPA 201


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 5 STDPQDPTPA 14
S DP+ P PA
Sbjct: 204 SFDPRSPNPA 213


>sp|RPO10_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloarcula marismortui (strain ATCC

Query: 1 KSRKSTDPQDP 11
++R++ +P+DP
Sbjct: 24 RTREAEEPEDP 34


>sp|NDK_PYRHO|NUCLEOSIDE diphosphate kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KSRKSTDPQDPTPA 14
K +TDP+D P
Sbjct: 89 KMAGATDPKDAAPG 102


>sp|SYE_METTM|GLUTAMATE--TRNA ligase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 3 RKSTDPQDPTPA 14
R TD Q P PA
Sbjct: 235 RVKTDLQHPNPA 246


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 RKSTDPQDPTPA 14
R TDP+ P P+
Sbjct: 236 RVKTDPRHPDPS 247


>sp|ARGB_METST|ACETYLGLUTAMATE kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 6 TDPQDP 11
TDP DP
Sbjct: 223 TDPDDP 228


>sp|EF2_METKA|ELONGATION factor 2|Methanopyrus kandleri (strain AV19 /

Query: 6 TDPQDP 11
TDP+DP
Sbjct: 895 TDPEDP 900


>sp|G3P_PICTO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 RKSTDPQD 10
R++TDP D
Sbjct: 166 RRATDPND 173


>sp|G3P2_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SRKSTDPQD 10
+R++TDP D
Sbjct: 167 ARRATDPND 175


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 KSRKSTDPQDPTP 13
++RK P+ P P
Sbjct: 718 RTRKGLKPEPPKP 730


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 SRKSTDPQD 10
+R++TDP D
Sbjct: 167 ARRATDPND 175


>sp|G3P1_METAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 SRKSTDPQD 10
+R++TDP D
Sbjct: 167 ARRATDPND 175


>sp|GAPN_THETE|NAD(P)-DEPENDENT glyceraldehyde-3-phosphate dehydrogenase|Thermoproteus tenax

Query: 2 SRKSTDPQDPT 12
S + DP+DPT
Sbjct: 323 SLRVGDPRDPT 333


>sp|NDK_THEKO|NUCLEOSIDE diphosphate kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KSRKSTDPQDPTPA 14
K +TDP+D P
Sbjct: 91 KMAGATDPKDAEPG 104


>sp|DCD_SACS2|DCTP deaminase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KSRKSTDPQDPTPA 14
K+ K DP +P P+
Sbjct: 45 KTDKIFDPDNPDPS 58


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RKSTDPQDP 11
R S DP+DP
Sbjct: 10 RFSWDPRDP 18


>sp|MTRH_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanocaldococcus jannaschii (strain

Query: 7 DPQDPT 12
DP DPT
Sbjct: 156 DPMDPT 161


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 1 KSRKSTDP 8
K RKS DP
Sbjct: 535 KGRKSRDP 542


>sp|G3P_THEAC|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RKSTDPQD 10
R++TDP D
Sbjct: 166 RRATDPND 173


>sp|G3P1_METBF|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase 1|Methanosarcina barkeri (strain Fusaro /

Query: 2 SRKSTDPQD 10
+R++TDP D
Sbjct: 167 ARRATDPND 175




THE END