1|SequenceR|10|1|SLFLAWCRNM
>sp|KR2_EBVG|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 SLFLAWCRNM 10
S FL WCR++
Sbjct: 379 SQFLQWCRSL 388
>sp|KR2_EBVB9|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 SLFLAWCRNM 10
S FL WCR++
Sbjct: 379 SQFLQWCRSL 388
>sp|KR2_EBVA8|SERINE/THREONINE-PROTEIN kinase BGLF4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 SLFLAWCRNM 10
S FL WCR++
Sbjct: 379 SQFLQWCRSL 388
>sp|ITP_HHV6Z|INNER tegument protein|Human herpesvirus 6B (strain Z29)
Query: 3 FLAWCRNM 10
F+A CRN+
Sbjct: 870 FIATCRNL 877
>sp|ITP_HHV6U|INNER tegument protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FLAWCRNM 10
F+A CRN+
Sbjct: 870 FIATCRNL 877
>sp|UL37_HHV6G|CAPSID assembly protein UL37 homolog|Human herpesvirus 6A (strain GS)
Query: 3 FLAWCRNM 10
F+A CRN+
Sbjct: 586 FIATCRNL 593
>sp|NS12_CVHOC|NON-STRUCTURAL protein of 12.9 kDa|Human coronavirus OC43 (HCoV-OC43)
Query: 5 AWCRN 9
AWCRN
Sbjct: 45 AWCRN 49
>sp|LT_POVWU|LARGE T antigen|WU polyomavirus (WUPyV)
Query: 2 LFLAWCR 8
L L WCR
Sbjct: 594 LMLIWCR 600
>sp|US8A_HHV1F|US8.5 protein|Human herpesvirus 1 (strain F)
Query: 1 SLFLAW 6
SLF+AW
Sbjct: 124 SLFVAW 129
>sp|US8A_HHV11|PROTEIN US8.5|Human herpesvirus 1 (strain 17)
Query: 1 SLFLAW 6
SLF+AW
Sbjct: 124 SLFVAW 129
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FLAWCRN 9
F+ WC++
Sbjct: 6781 FMLWCKD 6787
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 3 FLAWCRN 9
F+ WC++
Sbjct: 6758 FMLWCKD 6764
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 5 AWCR 8
AWCR
Sbjct: 482 AWCR 485
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 FLAWCRN 9
F+ WC++
Sbjct: 6758 FMLWCKD 6764
>sp|VU94_HHV6Z|PROTEIN U94|Human herpesvirus 6B (strain Z29)
Query: 3 FLAWCRN 9
FL W RN
Sbjct: 469 FLFWARN 475
>sp|VU94_HHV6H|PROTEIN U94|Human herpesvirus 6B (HHV-6 variant
Query: 3 FLAWCRN 9
FL W RN
Sbjct: 469 FLFWARN 475
>sp|VU94_HHV6U|PROTEIN U94|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 FLAWCRN 9
FL W RN
Sbjct: 469 FLFWARN 475
>sp|UL25_HHV6G|VIRION-PACKAGING protein UL25 homolog|Human herpesvirus 6A (strain GS)
Query: 1 SLFLAW 6
SLFL W
Sbjct: 371 SLFLLW 376
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 FLAWCR 8
+ WCR
Sbjct: 476 LMTWCR 481
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 FLAWCR 8
+ WCR
Sbjct: 476 LMTWCR 481
>sp|CVC2_HHV6U|CAPSID vertex component 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SLFLAW 6
SLFL W
Sbjct: 371 SLFLLW 376
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 FLAWCR 8
+ WCR
Sbjct: 476 LMTWCR 481
>sp|GB_HHV7J|ENVELOPE glycoprotein B|Human herpesvirus 7 (strain JI)
Query: 5 AWCRN 9
AWC N
Sbjct: 432 AWCLN 436
>sp|CVC2_HHV6Z|CAPSID vertex component 2|Human herpesvirus 6B (strain Z29)
Query: 1 SLFLAW 6
SLFL W
Sbjct: 371 SLFLLW 376
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LFLAWCRNM 10
++ +WC+++
Sbjct: 230 VYTSWCQSL 238
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LFLAWCRNM 10
++ +WC+++
Sbjct: 230 VYTSWCQSL 238
>sp|NPH2_MONPV|RNA helicase NPH-II|Monkeypox virus (MPXV)
Query: 2 LFLAW 6
+FLAW
Sbjct: 171 IFLAW 175
>sp|HEMA_MEASI|HEMAGGLUTININ glycoprotein|Measles virus (strain IP-3-Ca) (MeV)
Query: 4 LAWCRN 9
L WC N
Sbjct: 136 LTWCIN 141
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 4 LAWCRN 9
L WC N
Sbjct: 136 LTWCIN 141
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 4 LAWCRN 9
L WC N
Sbjct: 136 LTWCIN 141
>sp|HEMA_MEASC|HEMAGGLUTININ glycoprotein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 4 LAWCRN 9
L WC N
Sbjct: 136 LTWCIN 141
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 4 LAWCRN 9
L WC N
Sbjct: 136 LTWCIN 141
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 AWCR 8
AWCR
Sbjct: 328 AWCR 331
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 5 AWCR 8
AWCR
Sbjct: 336 AWCR 339
2|SequenceR|15|6|LYCCLSLFLA
>sp|ORF28_HHV8P|PROTEIN ORF28|Human herpesvirus 8 type P
Query: 1 LYCCLSLFLA 10
+YCC+ +FLA
Sbjct: 44 VYCCIRVFLA 53
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 YCCLSLFLA 10
YCC FLA
Sbjct: 194 YCCYLAFLA 202
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 YCCLSLFLA 10
YCC FLA
Sbjct: 194 YCCYLAFLA 202
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 YCCLSLFLA 10
YCC FLA
Sbjct: 194 YCCYLAFLA 202
>sp|POLS_BFV|STRUCTURAL polyprotein|Barmah forest virus (BFV)
Query: 1 LYCCLSLFLA 10
L CC+ +FL
Sbjct: 780 LACCMKIFLG 789
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 LYCCLS 6
YCCL+
Sbjct: 2161 FYCCLT 2166
>sp|NS2A_CVHOC|NON-STRUCTURAL protein 2a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 YCCLSL 7
YCCL +
Sbjct: 209 YCCLDV 214
>sp|DNBI_ADE12|PROBABLE DNA-binding protein|Human adenovirus A serotype 12
Query: 1 LYCCLS 6
L+CC++
Sbjct: 124 LFCCIA 129
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 2 YCCLSLFLA 10
Y CL+ FL+
Sbjct: 2001 YLCLTNFLS 2009
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 2 YCCLSLFLA 10
Y CL+ FL+
Sbjct: 2001 YLCLTNFLS 2009
>sp|NSP4_ROTH3|NON-STRUCTURAL glycoprotein 4|Rotavirus A (strain
Query: 2 YCCLSLF 8
YC +S+F
Sbjct: 70 YCIVSIF 76
3|SequenceR|20|11|ASVLRLYCCL
>sp|VU3_HHV6U|PROTEIN U3|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 VLRLYCCL 10
+LR+Y CL
Sbjct: 53 LLRVYTCL 60
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 3 VLRLYCCL 10
+LR+Y CL
Sbjct: 66 LLRVYTCL 73
>sp|MCES_MONPV|MRNA-CAPPING enzyme regulatory subunit OPG124|Monkeypox virus (MPXV)
Query: 4 LRLYCCL 10
+R+YC L
Sbjct: 169 MRIYCSL 175
>sp|MCES_VACCA|MRNA-CAPPING enzyme regulatory subunit|Vaccinia virus (strain Ankara) (VACV)
Query: 4 LRLYCCL 10
+R+YC L
Sbjct: 169 MRIYCSL 175
>sp|MCES_VACCC|MRNA-CAPPING enzyme regulatory subunit OPG124|Vaccinia virus (strain Copenhagen)
Query: 4 LRLYCCL 10
+R+YC L
Sbjct: 169 MRIYCSL 175
>sp|MCES_VARV|MRNA-CAPPING enzyme regulatory subunit|Variola virus
Query: 4 LRLYCCL 10
+R+YC L
Sbjct: 169 MRIYCSL 175
>sp|MCES_VAR67|MRNA-CAPPING enzyme regulatory subunit OPG124|Variola virus (isolate
Query: 4 LRLYCCL 10
+R+YC L
Sbjct: 169 MRIYCSL 175
>sp|GB_HHV6Z|ENVELOPE glycoprotein B|Human herpesvirus 6B (strain Z29)
Query: 2 SVLRLYC 8
SVL +YC
Sbjct: 16 SVLMIYC 22
>sp|GB_HHV6U|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SVLRLYC 8
SVL +YC
Sbjct: 16 SVLMIYC 22
>sp|GB_HHV6G|ENVELOPE glycoprotein B|Human herpesvirus 6A (strain GS)
Query: 2 SVLRLYC 8
SVL +YC
Sbjct: 16 SVLMIYC 22
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 3 VLRLYCC 9
V+R +CC
Sbjct: 1094 VIRDWCC 1100
>sp|TRM3_HHV8P|TRIPARTITE terminase subunit 3|Human herpesvirus 8 type P
Query: 1 ASVLRLYC 8
+SVL YC
Sbjct: 57 SSVLETYC 64
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 4 LRLYCCL 10
+R+Y CL
Sbjct: 600 VRIYTCL 606
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 4 LRLYCCL 10
+R+Y CL
Sbjct: 600 VRIYTCL 606
4|SequenceR|25|16|IPDGEASVLR
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 1 IPDGEASVLR 10
+ GE+S+LR
Sbjct: 162 VSTGESSILR 171
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 PDGEASVL 9
PD E+SVL
Sbjct: 831 PDIESSVL 838
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 PDGEASVL 9
PD E+SVL
Sbjct: 831 PDIESSVL 838
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 PDGEASVL 9
PDG SVL
Sbjct: 98 PDGTPSVL 105
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 2 PDGEASVL 9
PDG SVL
Sbjct: 98 PDGTPSVL 105
>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 GEASVLR 10
GE+S+LR
Sbjct: 165 GESSILR 171
>sp|VL1_HPV41|MAJOR capsid protein L1|Human papillomavirus type 41
Query: 1 IPDGEAS 7
+P+G+AS
Sbjct: 378 VPEGDAS 384
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 84 IPSAKASIL 92
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 84 IPSAKASIL 92
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 84 IPSAKASIL 92
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 84 IPSAKASIL 92
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 88 IPSAKASIL 96
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 87 IPSAKASIL 95
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 91 IPSAKASIL 99
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 83 IPSAKASIL 91
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 1 IPDGEASVL 9
IP +AS+L
Sbjct: 76 IPSAKASIL 84
5|SequenceR|30|21|YLEEPIPDGE
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 EEPIPDGE 10
E+PIP+GE
Sbjct: 1832 EKPIPEGE 1839
Query: 5 PIPDGE 10
PIPDG+
Sbjct: 2417 PIPDGD 2422
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 3 EEPIPDG 9
EEPIPD
Sbjct: 1671 EEPIPDA 1677
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 3 EEPIPDG 9
EEP+PD
Sbjct: 1676 EEPVPDA 1682
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 LEEPIPDG 9
++EPIP G
Sbjct: 1676 MDEPIPAG 1683
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 PIPDGE 10
P PDGE
Sbjct: 2418 PFPDGE 2423
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 PIPDGE 10
P PDGE
Sbjct: 2418 PFPDGE 2423
>sp|EBNA1_EBVG|EPSTEIN-BARR nuclear antigen 1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 YLEEPIPDGE 10
YL+E PDGE
Sbjct: 417 YLQEGGPDGE 426
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 LEEPIPDG 9
++EP+P G
Sbjct: 1676 MDEPVPAG 1683
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 LEEPIPDG 9
+EEP+P+
Sbjct: 1674 VEEPVPEA 1681
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 LEEPIPDG 9
+EEP P G
Sbjct: 1672 MEEPAPAG 1679
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 3 EEPIPDG 9
EEP+P+
Sbjct: 1676 EEPVPEA 1682
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 3 EEPIPDG 9
EEP+P+
Sbjct: 1676 EEPVPEA 1682
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 3 EEPIPDG 9
EEP+P+
Sbjct: 1676 EEPVPEA 1682
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 3 EEPIPDG 9
EEP+P+
Sbjct: 1675 EEPVPEA 1681
>sp|NS7A_SARS|ORF7A protein|Severe acute respiratory syndrome coronavirus
Query: 2 LEEPIPDG 9
L+EP P G
Sbjct: 31 LKEPCPSG 38
>sp|NRAM_INBBE|NEURAMINIDASE B virus (strain B/Beijing/1/1987)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 321 YLDTPRPD 328
>sp|NRAM_INBHK|NEURAMINIDASE B virus (strain B/Hong
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|NRAM_INBUS|NEURAMINIDASE B virus (strain B/USSR/100/1983)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|NRAM_INBOR|NEURAMINIDASE B virus (strain B/Oregon/5/1980)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 EEPIP 7
EEPIP
Sbjct: 1490 EEPIP 1494
>sp|MC014_MCV1|PROTEIN MC014|Molluscum contagiosum virus subtype 1
Query: 4 EPIPDGE 10
EP+P G+
Sbjct: 24 EPVPAGQ 30
>sp|RIR1_HCMVM|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 EEPIPDG 9
E P PDG
Sbjct: 94 ESPSPDG 100
>sp|RIR1_HCMVA|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human cytomegalovirus (strain
Query: 3 EEPIPDG 9
E P PDG
Sbjct: 94 ESPSPDG 100
>sp|GM_HHV2H|ENVELOPE glycoprotein M|Human herpesvirus 2 (strain HG52)
Query: 5 PIPDGE 10
P+PD E
Sbjct: 437 PVPDAE 442
>sp|NRAM_INBMF|NEURAMINIDASE B virus (strain B/Memphis/3/1989)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 321 YLDTPRPD 328
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|UL97_HCMVA|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LEEPIPD 8
L EP PD
Sbjct: 484 LSEPYPD 490
>sp|NRAM_INBYB|NEURAMINIDASE B virus (strain B/Yamagata/16/1988)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|NRAM_INBSI|NEURAMINIDASE B virus (strain B/Singapore/222/1979)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|UNG_HHV7J|URACIL-DNA glycosylase|Human herpesvirus 7 (strain JI)
Query: 3 EEPIPDG 9
++P PDG
Sbjct: 90 QDPYPDG 96
>sp|UL97_HCMVM|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEEPIPD 8
L EP PD
Sbjct: 484 LSEPYPD 490
>sp|NRAM_INBVI|NEURAMINIDASE B virus (strain B/Victoria/3/1985)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 321 YLDTPRPD 328
>sp|NRAM_INBME|NEURAMINIDASE B virus (strain B/Memphis/6/1986)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 321 YLDTPRPD 328
>sp|NRAM_INBMD|NEURAMINIDASE B virus (strain B/Maryland/1959)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 322 YLDTPRPD 329
>sp|NRAM_INBLN|NEURAMINIDASE B virus (strain B/Leningrad/179/1986)
Query: 1 YLEEPIPD 8
YL+ P PD
Sbjct: 321 YLDTPRPD 328
>sp|UL97_HCMVT|SERINE/THREONINE protein kinase UL97|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 LEEPIPD 8
L EP PD
Sbjct: 484 LSEPYPD 490
>sp|UNG_HHV6U|URACIL-DNA glycosylase|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EEPIPDG 9
++P PDG
Sbjct: 92 QDPYPDG 98
>sp|UNG_HHV6Z|URACIL-DNA glycosylase|Human herpesvirus 6B (strain Z29)
Query: 3 EEPIPDG 9
++P PDG
Sbjct: 92 QDPYPDG 98
>sp|TRM1_HCMVM|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LEEPIPDG 9
+ P+PDG
Sbjct: 408 IRRPLPDG 415
>sp|TRM1_HCMVA|TRIPARTITE terminase subunit 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LEEPIPDG 9
+ P+PDG
Sbjct: 408 IRRPLPDG 415
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 LEEPIPD 8
+EE IPD
Sbjct: 1834 IEEQIPD 1840
>sp|VGLI_HCMVM|UL37 immediate early glycoprotein|Human cytomegalovirus (strain
Query: 2 LEEPIP 7
LE+P+P
Sbjct: 30 LEDPLP 35
>sp|VGLI_HCMVA|UL37 immediate early glycoprotein|Human cytomegalovirus (strain AD169)
Query: 2 LEEPIP 7
LE+P+P
Sbjct: 30 LEDPLP 35
>sp|VE6_HPV14|PROTEIN E6|Human papillomavirus 14
Query: 1 YLEEPIP 7
+LE P+P
Sbjct: 31 FLEPPLP 37
>sp|SCAF_HHV11|CAPSID scaffolding protein|Human herpesvirus 1 (strain 17)
Query: 2 LEEPIPD 8
+EEP+PD
Sbjct: 10 MEEPLPD 16
>sp|HEMA_MEASA|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 YLEEPIPD 8
YLE+P+ +
Sbjct: 275 YLEQPVSN 282
>sp|HEMA_MEASH|HEMAGGLUTININ glycoprotein|Measles virus (strain Halle) (MeV)
Query: 1 YLEEPIPD 8
YLE+P+ +
Sbjct: 275 YLEQPVSN 282
>sp|HEMA_MEASE|HEMAGGLUTININ glycoprotein|Measles virus (strain Edmonston) (MeV)
Query: 1 YLEEPIPD 8
YLE+P+ +
Sbjct: 275 YLEQPVSN 282
>sp|UL150_HCMVM|UNCHARACTERIZED protein UL150|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 EEPIPDGE 10
+EP DGE
Sbjct: 467 DEPHSDGE 474
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 4 EPIPDG 9
EPI DG
Sbjct: 1108 EPIDDG 1113
>sp|VE6_HPV21|PROTEIN E6|Human papillomavirus 21
Query: 1 YLEEPIP 7
+LE P+P
Sbjct: 28 FLEPPLP 34
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 4 EPIPDG 9
EPI DG
Sbjct: 1108 EPIDDG 1113
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 4 EPIPD 8
EP+PD
Sbjct: 265 EPVPD 269
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 4 EPIPD 8
EP+PD
Sbjct: 265 EPVPD 269
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 4 EPIPD 8
EP+PD
Sbjct: 266 EPVPD 270
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 4 EPIPD 8
EP+PD
Sbjct: 266 EPVPD 270
>sp|CAPSD_CTFVL|INNER capsid protein VP2|Colorado tick fever virus (strain
Query: 4 EPIPDG 9
+PIP+G
Sbjct: 626 DPIPNG 631
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 EEPIPDGE 10
++PIPD +
Sbjct: 1168 DQPIPDAD 1175
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 EEPIPDGE 10
++PIPD +
Sbjct: 1168 DQPIPDAD 1175
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 EEPIPDGE 10
++PIPD +
Sbjct: 1168 DQPIPDAD 1175
6|SequenceR|35|26|DSLMEYLEEP
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 DSLMEYLEE 9
DSL +LEE
Sbjct: 191 DSLARFLEE 199
>sp|PG021_VAR67|HOST range factor p28|Variola virus (isolate Human/India/Ind3/1967)
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|PG021_VACC8|HOST range factor p28|Vaccinia virus (strain LC16m8) (VACV)
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|PG021_VACC0|HOST range factor p28|Vaccinia virus (strain LC16m0) (VACV)
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|PG021_MONPZ|HOST range factor p28|Monkeypox virus (strain Zaire-96-I-16) (MPXV)
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|PG021_MONPV|HOST range factor p28|Monkeypox virus (MPXV)
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|PG021_CWPXG|HOST range factor p28|Cowpox virus (strain GRI-90 /
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|PG021_CWPXB|HOST range factor p28|Cowpox virus (strain Brighton Red)
Query: 2 SLMEYLEEP 10
++++Y++EP
Sbjct: 17 TILQYIDEP 25
>sp|VP2_POVBK|MINOR capsid protein VP2|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 1 DSLMEYLEE 9
DSL +LEE
Sbjct: 191 DSLARFLEE 199
>sp|UL23_HCMVM|TEGUMENT protein UL23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 DSLMEYL 7
DSLME++
Sbjct: 239 DSLMEFV 245
>sp|UL23_HCMVA|TEGUMENT protein UL23|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 DSLMEYL 7
DSLME++
Sbjct: 239 DSLMEFV 245
>sp|POL_SFV3L|PRO-POL polyprotein|Simian foamy virus type 3
Query: 4 MEYLEEP 10
M YLE+P
Sbjct: 553 MSYLEDP 559
>sp|VP2_ROTGA|INNER capsid protein VP2|Rotavirus B (isolate RVB/Human/China/ADRV/1982)
Query: 1 DSLMEY 6
D+LMEY
Sbjct: 284 DTLMEY 289
>sp|L_MABVR|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 DSLMEYLEE 9
DS+++YL E
Sbjct: 2027 DSVIQYLPE 2035
>sp|L_MABVA|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 DSLMEYLEE 9
DS+++YL E
Sbjct: 2027 DSVIQYLPE 2035
>sp|L_MABVP|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 DSLMEYLEE 9
DS+++YL E
Sbjct: 2027 DSVIQYLPE 2035
>sp|L_MABVO|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 DSLMEYLEE 9
DS+++YL E
Sbjct: 2027 DSVIQYLPE 2035
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 DSLMEYLEE 9
DS+++YL E
Sbjct: 2027 DSVIQYLPE 2035
>sp|POL_FOAMV|PRO-POL polyprotein|Human spumaretrovirus (SFVcpz(hu)) (Human foamy
Query: 4 MEYLEEP 10
M YLE+P
Sbjct: 553 MTYLEDP 559
>sp|POL_SFV1|PRO-POL polyprotein|Simian foamy virus type 1
Query: 4 MEYLEEP 10
M YLE+P
Sbjct: 553 MTYLEDP 559
>sp|MAT_INCJJ|POLYPROTEIN p42|Influenza C virus (strain C/JJ/1950)
Query: 1 DSLMEYLEE 9
D +ME +EE
Sbjct: 119 DQIMEMVEE 127
>sp|MAT_INCAA|POLYPROTEIN p42|Influenza C virus (strain C/Ann
Query: 1 DSLMEYLEE 9
D +ME +EE
Sbjct: 119 DQIMEMVEE 127
>sp|U17_HHV6U|PROTEIN U17|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 DSLMEYLEE 9
DSL Y+E+
Sbjct: 31 DSLSTYVEQ 39
>sp|MAT_INCTA|POLYPROTEIN p42|Influenza C virus (strain C/Taylor/1233/1947)
Query: 1 DSLMEYLEE 9
D +ME +EE
Sbjct: 119 DQIMEMVEE 127
>sp|MAT_INCHY|POLYPROTEIN p42|Influenza C virus (strain C/Hyogo/1/1983)
Query: 1 DSLMEYLEE 9
D +ME +EE
Sbjct: 119 DQIMEMVEE 127
>sp|MAT_INCCA|POLYPROTEIN p42|Influenza C virus (strain C/California/1978)
Query: 1 DSLMEYLEE 9
D +ME +EE
Sbjct: 119 DQIMEMVEE 127
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 2 SLMEYLEE 9
S+ EYLE+
Sbjct: 1007 SIQEYLED 1014
>sp|POLG_SOUV3|GENOME polyprotein|Southampton virus (strain GI/Human/United
Query: 2 SLMEYLEE 9
S+ EYLE+
Sbjct: 1006 SIQEYLED 1013
7|SequenceR|40|31|SRISHDSLME
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 SRISHDSLME 10
S + HDS++E
Sbjct: 1040 SLVGHDSILE 1049
>sp|V30K_HCMVE|30 kDa major early protein|Human cytomegalovirus (strain Eisenhardt)
Query: 1 SRISHDSLM 9
S I HDSLM
Sbjct: 108 SFIDHDSLM 116
>sp|HEMA_INCYB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/4/1988)
Query: 2 RISHD 6
RISHD
Sbjct: 508 RISHD 512
>sp|HEMA_INCYA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Yamagata/10/1981)
Query: 2 RISHD 6
RISHD
Sbjct: 502 RISHD 506
>sp|HEMA_INCP3|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/439/1982)
Query: 2 RISHD 6
RISHD
Sbjct: 502 RISHD 506
>sp|HEMA_INCP2|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/115/1981)
Query: 2 RISHD 6
RISHD
Sbjct: 502 RISHD 506
>sp|HEMA_INCP1|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Pig/Beijing/10/1981)
Query: 2 RISHD 6
RISHD
Sbjct: 502 RISHD 506
>sp|HEMA_INCNB|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/2/1985)
Query: 2 RISHD 6
RISHD
Sbjct: 508 RISHD 512
>sp|HEMA_INCNA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Nara/1982)
Query: 2 RISHD 6
RISHD
Sbjct: 501 RISHD 505
>sp|HEMA_INCKY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Kyoto/41/1982)
Query: 2 RISHD 6
RISHD
Sbjct: 501 RISHD 505
>sp|HEMA_INCJH|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 2 RISHD 6
RISHD
Sbjct: 515 RISHD 519
>sp|HEMA_INCHY|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Hyogo/1/1983)
Query: 2 RISHD 6
RISHD
Sbjct: 501 RISHD 505
>sp|HEMA_INCCA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/California/1978)
Query: 2 RISHD 6
RISHD
Sbjct: 514 RISHD 518
>sp|HEMA_INCAA|HEMAGGLUTININ-ESTERASE-FUSION glycoprotein|Influenza C virus (strain C/Ann
Query: 2 RISHD 6
RISHD
Sbjct: 515 RISHD 519
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 RISHDSLM 9
RISH S++
Sbjct: 125 RISHGSML 132
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 RISHDSLM 9
RISH S++
Sbjct: 125 RISHGSML 132
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 RISHDSLM 9
RISH S++
Sbjct: 126 RISHGSML 133
>sp|DYR_HHV8P|PUTATIVE Dihydrofolate reductase|Human herpesvirus 8 type P
Query: 3 ISHDSL 8
+SHDSL
Sbjct: 148 LSHDSL 153
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 2 RISHDSLM 9
RISH S++
Sbjct: 120 RISHGSML 127
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 5 HDSLME 10
HD++ME
Sbjct: 986 HDAIME 991
8|SequenceR|45|36|QLDDFSRISH
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 LDDFSRIS 9
+DDF+RI+
Sbjct: 5400 IDDFNRIA 5407
>sp|NCAP_SARS|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 LDDFSR 7
+DDFSR
Sbjct: 401 MDDFSR 406
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 4 DFSRIS 9
DFSR+S
Sbjct: 6057 DFSRVS 6062
>sp|NCAP_SARS2|NUCLEOPROTEIN acute respiratory syndrome coronavirus
Query: 2 LDDFSR 7
LDDFS+
Sbjct: 400 LDDFSK 405
>sp|VP4_CTFVL|UNCHARACTERIZED protein VP4|Colorado tick fever virus (strain
Query: 2 LDDFSRISH 10
+DD R+ H
Sbjct: 557 IDDVKRVGH 565
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 2 LDDFSRISH 10
LD+ +R++H
Sbjct: 1228 LDELTRLNH 1236
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 QLDDFSRISH 10
+ D++ R++H
Sbjct: 435 EFDEYRRLTH 444
>sp|US26_HCMVM|PROTEIN US26|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LDDFSR 7
LDDF+R
Sbjct: 164 LDDFAR 169
>sp|US26_HCMVA|UNCHARACTERIZED protein HHLF5|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LDDFSR 7
LDDF+R
Sbjct: 164 LDDFAR 169
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 LDDFSR 7
L+DFSR
Sbjct: 1808 LEDFSR 1813
>sp|NCAP_RABVS|NUCLEOPROTEIN virus (strain SAD B19)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVU|NUCLEOPROTEIN virus (isolate Skunk/Ontario/1991) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVP|NUCLEOPROTEIN virus (strain Pasteur vaccins
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVF|NUCLEOPROTEIN virus (isolate Fox/Ontario/1991) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVR|NUCLEOPROTEIN virus (strain China/MRV) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVE|NUCLEOPROTEIN virus (strain ERA) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVA|NUCLEOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVH|NUCLEOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVC|NUCLEOPROTEIN virus (strain CVS-11) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVI|NUCLEOPROTEIN virus (strain India) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVN|NUCLEOPROTEIN virus (strain Nishigahara RCEH)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVB|NUCLEOPROTEIN virus (strain silver-haired bat-associated)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
>sp|NCAP_RABVD|NUCLEOPROTEIN virus (strain China/DRV) (RABV)
Query: 5 FSRISH 10
FSRI H
Sbjct: 214 FSRIEH 219
9|SequenceR|50|41|GHLLRQLDDF
>sp|TRX2_HCMVM|TRIPLEX capsid protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 LLRQLDDF 10
+LRQLDD
Sbjct: 274 MLRQLDDL 281
>sp|TRX2_HCMVA|TRIPLEX capsid protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 LLRQLDDF 10
+LRQLDD
Sbjct: 274 MLRQLDDL 281
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 HLLRQLDDF 10
HL + L+DF
Sbjct: 3233 HLAKALNDF 3241
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 HLLRQLDDF 10
HL + L+DF
Sbjct: 3210 HLAKALNDF 3218
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 HLLRQLDDF 10
HL + L+DF
Sbjct: 3233 HLAKALNDF 3241
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 HLLRQLDDF 10
HL + L+DF
Sbjct: 3210 HLAKALNDF 3218
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 HLLRQL 7
H+LRQL
Sbjct: 778 HILRQL 783
>sp|PG097_VARV|PROTEIN OPG097|Variola virus
Query: 2 HLLRQLDD 9
++L+Q+DD
Sbjct: 89 YMLKQVDD 96
>sp|PG097_VAR67|PROTEIN OPG097|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 HLLRQLDD 9
++L+Q+DD
Sbjct: 89 YMLKQVDD 96
>sp|PG097_VACCC|PROTEIN OPG097|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 HLLRQLDD 9
++L+Q+DD
Sbjct: 90 YMLKQVDD 97
>sp|PG097_MONPV|PROTEIN OPG097|Monkeypox virus (MPXV)
Query: 2 HLLRQLDD 9
++L+Q+DD
Sbjct: 84 YMLKQVDD 91
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 3 LLRQLDD 9
L+RQL+D
Sbjct: 759 LIRQLED 765
>sp|ITP_HHV2H|INNER tegument protein|Human herpesvirus 2 (strain HG52)
Query: 3 LLRQLDD 9
L+RQL+D
Sbjct: 759 LVRQLED 765
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 1 GHLLRQ 6
GH LRQ
Sbjct: 122 GHALRQ 127
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 1 GHLLRQ 6
GH LRQ
Sbjct: 122 GHALRQ 127
>sp|VL2_HPV48|MINOR capsid protein L2|Human papillomavirus type 48
Query: 1 GHLLRQLDDF 10
GH+ +DDF
Sbjct: 375 GHVHTIVDDF 384
>sp|CFLA_MCV1|VIRAL CASP8 and FADD-like apoptosis|Molluscum contagiosum virus subtype
Query: 2 HLLRQLD 8
HLL +LD
Sbjct: 15 HLLEELD 21
10|SequenceR|55|46|EEGPDGHLLR
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 EGPDGHLL 9
+GPDGHL+
Sbjct: 556 QGPDGHLI 563
>sp|GLYCO_LBV|GLYCOPROTEIN bat virus (LBV)
Query: 2 EGPDGHLL 9
+GPDGH+L
Sbjct: 384 KGPDGHIL 391
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 3 GPDGHLL 9
GPDGH+L
Sbjct: 385 GPDGHVL 391
>sp|GLYCO_RABVI|GLYCOPROTEIN virus (strain India) (RABV)
Query: 3 GPDGHLL 9
GPDGH+L
Sbjct: 385 GPDGHVL 391
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 3 GPDGHLL 9
GPDGH+L
Sbjct: 385 GPDGHVL 391
>sp|GLYCO_RABVC|GLYCOPROTEIN virus (strain CVS-11) (RABV)
Query: 3 GPDGHLL 9
GPDGH+L
Sbjct: 385 GPDGHVL 391
>sp|GLYCO_RABVA|GLYCOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 3 GPDGHLL 9
GPDGH+L
Sbjct: 385 GPDGHVL 391
>sp|GLYCO_RABVD|GLYCOPROTEIN virus (strain China/DRV) (RABV)
Query: 3 GPDGHLL 9
GPDGH+L
Sbjct: 385 GPDGHVL 391
>sp|VE1_HPV37|REPLICATION protein E1|Human papillomavirus 37
Query: 1 EEGPDGHLLR 10
+EG DGH R
Sbjct: 587 DEGDDGHTQR 596
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 GPDGHLLR 10
GPD H+L+
Sbjct: 825 GPDEHVLK 832
>sp|GLYCO_ABLVH|GLYCOPROTEIN bat lyssavirus (isolate Human/AUS/1998)
Query: 4 PDGHLL 9
PDGH+L
Sbjct: 386 PDGHVL 391
>sp|RP132_VARV|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_VAR67|DNA-DIRECTED RNA polymerase 133 kDa|Variola virus (isolate
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_VACCT|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Tian Tan)
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_VACCC|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_VACCA|DNA-DIRECTED RNA polymerase 133 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 113 EGKDSHLIK 121
>sp|RP132_MONPZ|DNA-DIRECTED RNA polymerase 132 kDa|Monkeypox virus (strain Zaire-96-I-16)
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_MONPV|DNA-DIRECTED RNA polymerase|Monkeypox virus (MPXV)
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_CWPXG|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain GRI-90 /
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|RP132_CWPXB|DNA-DIRECTED RNA polymerase 132 kDa|Cowpox virus (strain Brighton Red)
Query: 2 EGPDGHLLR 10
EG D HL++
Sbjct: 121 EGKDSHLIK 129
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EEGPDGHL 8
EEG DG L
Sbjct: 73 EEGSDGEL 80
>sp|IE2_HHV6U|IMMEDIATE-EARLY protein 2|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EEGPDGHL 8
EEG DG L
Sbjct: 73 EEGSDGEL 80
>sp|CAPSH_ADE41|HEXON protein|Human adenovirus F serotype 41
Query: 2 EGPDGHLL 9
E PD HL+
Sbjct: 268 EAPDTHLV 275
>sp|CAPSH_ADE40|HEXON protein|Human adenovirus F serotype 40
Query: 2 EGPDGHLL 9
E PD HL+
Sbjct: 267 EAPDTHLV 274
>sp|NSP1_ROTHC|NON-STRUCTURAL protein 1|Rotavirus C (isolate RVC/Human/United
Query: 4 PDGHLL 9
PDGH L
Sbjct: 359 PDGHAL 364
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 EGPDGH 7
EGPD H
Sbjct: 2053 EGPDEH 2058
>sp|GLYCO_RABVR|GLYCOPROTEIN virus (strain China/MRV) (RABV)
Query: 3 GPDGHLL 9
GPD H+L
Sbjct: 385 GPDDHVL 391
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 EGPDGHLL 9
+GP+ HLL
Sbjct: 2055 DGPNEHLL 2062
>sp|UL121_HCMVM|MEMBRANE protein UL121|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 EEGPDGHL 8
EEG D HL
Sbjct: 73 EEGDDVHL 80
>sp|CVC1_EBVB9|CAPSID vertex component 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 DGHLLR 10
DGHL+R
Sbjct: 129 DGHLIR 134
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 3 GPDGHLL 9
G DGH+L
Sbjct: 385 GSDGHVL 391
>sp|UL121_HCMVA|MEMBRANE protein UL121|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 EEGPDGHL 8
EEG D HL
Sbjct: 73 EEGGDLHL 80
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 EEGPDGHLLR 10
++GP H+LR
Sbjct: 772 QKGPAKHILR 781
>sp|VE1_HPV17|REPLICATION protein E1|Human papillomavirus 17
Query: 1 EEGPDGHLLR 10
EEG DG R
Sbjct: 587 EEGDDGQSQR 596
>sp|CAPSH_ADE31|HEXON protein|Human adenovirus A serotype 31
Query: 2 EGPDGHLL 9
E PD H++
Sbjct: 164 EAPDTHIV 171
>sp|VE2_HPV36|REGULATORY protein E2|Human papillomavirus 36
Query: 3 GPDGHL 8
PDGH
Sbjct: 105 APDGHF 110
>sp|VE7_HPV58|PROTEIN E7|Human papillomavirus 58
Query: 2 EGPDGH 7
+GPDG
Sbjct: 40 DGPDGQ 45
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 6 GHLLR 10
GHLLR
Sbjct: 476 GHLLR 480
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 6 GHLLR 10
GHLLR
Sbjct: 1792 GHLLR 1796
>sp|L_CHAVB|RNA-DIRECTED RNA polymerase L|Chapare mammarenavirus (isolate
Query: 6 GHLLR 10
GHLLR
Sbjct: 1788 GHLLR 1792
>sp|TRM1_HHV2H|TRIPARTITE terminase subunit 1|Human herpesvirus 2 (strain HG52)
Query: 1 EEGPDG 6
E GPDG
Sbjct: 742 ESGPDG 747
>sp|DR3_HHV6Z|UNCHARACTERIZED protein DR3|Human herpesvirus 6B (strain Z29)
Query: 1 EEGPDGHLL 9
+EG DG LL
Sbjct: 138 DEGTDGTLL 146
>sp|E312_ADE12|EARLY E3A 12.1 kDa protein|Human adenovirus A serotype 12
Query: 1 EEGPDGHLLR 10
E+G D HL++
Sbjct: 52 EKGIDTHLIK 61
11|SequenceR|60|51|LEAGDEEGPD
>sp|GH_HHV11|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain 17)
Query: 2 EAGDEEGP 9
+AG E+GP
Sbjct: 367 DAGAEQGP 374
>sp|GH_HHV1F|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain F)
Query: 2 EAGDEEGP 9
+AG E+GP
Sbjct: 367 DAGAEQGP 374
>sp|GH_HHV1E|ENVELOPE glycoprotein H|Human herpesvirus 1 (strain HFEM)
Query: 2 EAGDEEGP 9
+AG E+GP
Sbjct: 367 DAGAEQGP 374
>sp|POL_HV1MN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAGDEEGPD 10
EAG+E G D
Sbjct: 477 EAGEEAGDD 485
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 2 EAGDEE 7
EAGDE+
Sbjct: 897 EAGDED 902
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 2 EAGDEE 7
EAGDE+
Sbjct: 897 EAGDED 902
>sp|PG136_VARV|MAJOR core protein OPG136 precursor|Variola virus
Query: 1 LEAGDEEGPD 10
+E+GD G D
Sbjct: 671 IESGDITGED 680
>sp|PG136_VAR67|MAJOR core protein OPG136 precursor|Variola virus (isolate
Query: 1 LEAGDEEGPD 10
+E+GD G D
Sbjct: 671 IESGDITGED 680
>sp|PG136_VACCC|MAJOR core protein OPG136 precursor|Vaccinia virus (strain Copenhagen)
Query: 1 LEAGDEEGPD 10
+E+GD G D
Sbjct: 670 IESGDITGED 679
>sp|PG136_MONPV|MAJOR core protein OPG136 precursor|Monkeypox virus (MPXV)
Query: 1 LEAGDEEGPD 10
+E+GD G D
Sbjct: 670 IESGDITGED 679
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 4 GDEEGP 9
GD+ GP
Sbjct: 2757 GDQRGP 2762
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 4 GDEEGP 9
GD+ GP
Sbjct: 2757 GDQRGP 2762
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 4 GDEEGP 9
GD+ GP
Sbjct: 2757 GDQRGP 2762
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 4 GDEEGP 9
GD+ GP
Sbjct: 2757 GDQRGP 2762
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 4 GDEEGP 9
GD+ GP
Sbjct: 2757 GDQRGP 2762
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 EAGDEEGPD 10
EAG E G D
Sbjct: 475 EAGAEAGAD 483
12|SequenceR|65|56|TMNLDLEAGD
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 2 MNLDLEAG 9
+NL+L+AG
Sbjct: 67 LNLELDAG 74
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 4 LDLEAGD 10
LD+E GD
Sbjct: 869 LDVEEGD 875
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 TMNLDL 6
T+NLDL
Sbjct: 1365 TLNLDL 1370
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 TMNLDL 6
T+NLDL
Sbjct: 1365 TLNLDL 1370
>sp|NS1_I68A5|NON-STRUCTURAL protein 1|Influenza A virus (strain A/Korea/426/1968
Query: 1 TMNLDLEAG 9
T++LD+EA
Sbjct: 49 TLDLDIEAA 57
>sp|NEC1_EBVB9|NUCLEAR egress protein 1|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 5 DLEAGD 10
DLE GD
Sbjct: 295 DLECGD 300
>sp|NEC1_EBVA8|NUCLEAR egress protein 1|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 5 DLEAGD 10
DLE GD
Sbjct: 295 DLECGD 300
13|SequenceR|70|61|GSHSRTMNLD
>sp|CAPSD_LORDV|CAPSID protein VP1|Lordsdale virus (strain GII/Human/United
Query: 1 GSHSRTMNL 9
GSH TMNL
Sbjct: 295 GSHDYTMNL 303
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 1 GSHSRTMNLD 10
GSH R N D
Sbjct: 491 GSHYRMFNTD 500
>sp|L_MEASE|RNA-DIRECTED RNA polymerase L|Measles virus (strain Edmonston) (MeV)
Query: 1 GSHSRTMNL 9
GSH R +NL
Sbjct: 1934 GSHYREVNL 1942
>sp|L_MEASC|RNA-DIRECTED RNA polymerase L|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 GSHSRTMNL 9
GSH R +NL
Sbjct: 1934 GSHYREVNL 1942
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 2 SHSRTMNLD 10
SH ++N+D
Sbjct: 1092 SHGLSLNID 1100
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 2 SHSRTMNLD 10
SH ++N+D
Sbjct: 1092 SHGLSLNID 1100
14|SequenceR|75|66|SELEGGSHSR
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 ELEGGSHSR 10
ELE HSR
Sbjct: 2428 ELEKAVHSR 2436
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 3 LEGGSHSR 10
L GG+H R
Sbjct: 429 LSGGTHYR 436
>sp|UNG_HHV8P|URACIL-DNA glycosylase|Human herpesvirus 8 type P
Query: 5 GGSHSR 10
GG HSR
Sbjct: 218 GGRHSR 223
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 SELEGG 6
SELEGG
Sbjct: 3037 SELEGG 3042
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 SELEGG 6
SELEGG
Sbjct: 3037 SELEGG 3042
15|SequenceR|80|71|RGRALSELEG
>sp|AN_VZVO|ALKALINE nuclease|Varicella-zoster virus (strain Oka vaccine)
Query: 2 GRALSELEG 10
GRAL+EL+
Sbjct: 362 GRALTELDA 370
>sp|AN_VZVD|ALKALINE nuclease|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 GRALSELEG 10
GRAL+EL+
Sbjct: 362 GRALTELDA 370
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 GRALSELEG 10
GR S LEG
Sbjct: 1526 GRVFSYLEG 1534
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RGRALSELEG 10
RG +LS +EG
Sbjct: 2991 RGNSLSGVEG 3000
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 3 RALSELEG 10
+ LSELEG
Sbjct: 3034 KKLSELEG 3041
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 RGRALSELE 9
RG+ + ELE
Sbjct: 9 RGKKVDELE 17
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 GRALSE 7
GRALSE
Sbjct: 1181 GRALSE 1186
16|SequenceR|85|76|SGLSRRGRAL
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 SGLSRRGR 8
SGLSR+ R
Sbjct: 33 SGLSRKTR 40
17|SequenceR|90|81|EAITLSGLSR
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 3 ITLSGLSR 10
ITL G+SR
Sbjct: 147 ITLLGMSR 154
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 3 ITLSGLSR 10
ITL G+SR
Sbjct: 147 ITLLGMSR 154
>sp|NRAM_INBLE|NEURAMINIDASE B virus (strain B/Lee/1940)
Query: 1 EAITLSGL 8
+A+TLSG+
Sbjct: 392 DALTLSGV 399
18|SequenceR|95|86|AIMAPEAITL
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 IMAPEAITL 10
+MAPE TL
Sbjct: 321 VMAPEKPTL 329
>sp|UL40_HCMVA|PROTEIN UL40|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 AIMAPEAITL 10
A+MAP + L
Sbjct: 14 AVMAPRTLIL 23
>sp|UL40_HCMVM|PROTEIN UL40|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 AIMAPEAITL 10
A+MAP + L
Sbjct: 14 AVMAPRTLIL 23
>sp|POLG_ENMGO|GENOME polyprotein|Mengo encephalomyocarditis virus
Query: 1 AIMAPEAITL 10
A+M P+ +TL
Sbjct: 1141 AVMHPDPLTL 1150
>sp|GL_HCMVA|ENVELOPE glycoprotein L|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV6|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5040) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV4|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 4654) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV3|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 2387) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV2|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 1042) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV1|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 119) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV7|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5160) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMVP|ENVELOPE glycoprotein L|Human cytomegalovirus (strain PT) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV5|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5035) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMVM|ENVELOPE glycoprotein L|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|GL_HCMV8|ENVELOPE glycoprotein L|Human cytomegalovirus (strain 5508) (HHV-5)
Query: 4 APEAITL 10
APE ITL
Sbjct: 215 APEGITL 221
>sp|RIR2_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 AIMAPEAI 8
AIMA EA+
Sbjct: 119 AIMADEAL 126
>sp|RIR2_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 AIMAPEAI 8
AIMA EA+
Sbjct: 119 AIMADEAL 126
>sp|RIR2_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase small subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 AIMAPEAI 8
AIMA EA+
Sbjct: 119 AIMADEAL 126
19|SequenceR|100|91|RTKCEAIMAP
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 KCEAIMAP 10
KC +MAP
Sbjct: 314 KCVTVMAP 321
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 RTKCEAIMA 9
+T CEA++A
Sbjct: 574 QTLCEALLA 582
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 RTKCEAIMA 9
+T CEA++A
Sbjct: 574 QTLCEALLA 582
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 RTKCEAIMA 9
+T CEA++A
Sbjct: 575 QTLCEALLA 583
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 1 RTKCEAIMA 9
+T CEA++A
Sbjct: 575 QTLCEALLA 583
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 RTKCEAIMA 9
+T CEA++A
Sbjct: 574 QTLCEALLA 582
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 RTKCEAIMA 9
+T CEA++A
Sbjct: 574 QTLCEALLA 582
>sp|POLS_EEEV1|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TKCEAIMAP 10
+KC A +AP
Sbjct: 585 SKCTATLAP 593
>sp|POLS_EEEV8|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 2 TKCEAIMAP 10
+KC A +AP
Sbjct: 585 SKCTATLAP 593
>sp|UL43_HCMVM|TEGUMENT protein UL43|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TKCEAIMAP 10
++CEAI P
Sbjct: 192 SRCEAIGRP 200
>sp|UL43_HCMVA|TEGUMENT protein UL43|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TKCEAIMAP 10
++CEAI P
Sbjct: 192 SRCEAIGRP 200
>sp|POLS_EEEVF|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RTKCEAIMAP 10
+ KC A +AP
Sbjct: 584 KAKCIATLAP 593
>sp|POLS_EEEV3|STRUCTURAL polyprotein|Eastern equine encephalitis virus (strain
Query: 1 RTKCEAIMAP 10
+ KC A +AP
Sbjct: 583 KAKCIATLAP 592
>sp|POLS_EEEV|STRUCTURAL polyprotein|Eastern equine encephalitis virus (EEEV)
Query: 1 RTKCEAIMAP 10
+ KC A +AP
Sbjct: 582 KAKCIATLAP 591
20|SequenceR|105|96|EFVETRTKCE
>sp|E1B55_ADE02|E1B 55 kDa protein|Human adenovirus C serotype 2
Query: 2 FVETRTKC 9
+ ETRT+C
Sbjct: 443 YDETRTRC 450
>sp|E1B55_ADE05|E1B 55 kDa protein|Human adenovirus C serotype 5
Query: 2 FVETRTKC 9
+ ETRT+C
Sbjct: 444 YDETRTRC 451
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EFVETRT 7
E+V+TRT
Sbjct: 1868 EYVKTRT 1874
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 EFVETRT 7
E+V+TRT
Sbjct: 1868 EYVKTRT 1874
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EFVETRT 7
E+V+TRT
Sbjct: 1868 EYVKTRT 1874
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EFVETRT 7
E+V+TRT
Sbjct: 1868 EYVKTRT 1874
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EFVETRT 7
E+V+TRT
Sbjct: 1458 EYVKTRT 1464
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 EFVETRT 7
E+V+TRT
Sbjct: 1868 EYVKTRT 1874
>sp|U22_HHV6U|GLYCOPROTEIN U22|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 FVETRTKC 9
FV+ TKC
Sbjct: 104 FVDNDTKC 111
21|SequenceR|110|101|LRRSIEFVET
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 694 LRRKLEF 700
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 694 LRRKLEF 700
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 696 LRRKLEF 702
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 696 LRRKLEF 702
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 697 LRRKLEF 703
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 697 LRRKLEF 703
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 671 LRRKLEF 677
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 670 LRRKLEF 676
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 670 LRRKLEF 676
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 671 LRRKLEF 677
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 700 LRRKLEF 706
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 1 LRRSIEF 7
LRR +EF
Sbjct: 694 LRRKLEF 700
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 1 LRRSIEFVE 9
LRRS+E E
Sbjct: 1725 LRRSLEEAE 1733
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 LRRSIEFVE 9
LRRS+E E
Sbjct: 1755 LRRSLEEAE 1763
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 LRRSIEFVET 10
LRR+I V+T
Sbjct: 1559 LRRNIRQVQT 1568
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 LRRSIEFVET 10
LRR+I V+T
Sbjct: 1559 LRRNIRQVQT 1568
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 LRRSIEFVET 10
LRR+I V+T
Sbjct: 1559 LRRNIRQVQT 1568
22|SequenceR|115|106|NTRDILRRSI
>sp|VE1_HPV49|REPLICATION protein E1|Human papillomavirus type 49
Query: 1 NTRDILRR 8
N+RD+LR+
Sbjct: 57 NSRDLLRQ 64
>sp|E411_ADE05|PROBABLE early E4 11 kDa|Human adenovirus C serotype 5
Query: 3 RDILRR 8
RDILRR
Sbjct: 29 RDILRR 34
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 RDILRRSI 10
R I+RRSI
Sbjct: 266 RKIIRRSI 273
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 RDILRRSI 10
R I+RRSI
Sbjct: 266 RKIIRRSI 273
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 1 NTRDILRRSI 10
+TR I+R+S+
Sbjct: 1081 STRSIMRKSL 1090
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 1 NTRDILRRSI 10
+TR I+R+S+
Sbjct: 1081 STRSIMRKSL 1090
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 RDILRRSI 10
R I+RRSI
Sbjct: 266 RKIIRRSI 273
>sp|UL35_HCMVM|TEGUMENT protein UL35|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NTRDILR 7
N+RD+LR
Sbjct: 97 NSRDVLR 103
>sp|UL35_HCMVA|PROTEIN UL35|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NTRDILR 7
N+RD+LR
Sbjct: 97 NSRDVLR 103
23|SequenceR|120|111|VLFNANTRDI
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 LFNANTRD 9
+FN TRD
Sbjct: 1863 IFNRQTRD 1870
>sp|TEG1_VZVO|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 FNANTRDI 10
FNA RD+
Sbjct: 26 FNAGERDL 33
>sp|TEG1_VZVD|TEGUMENT protein UL46 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 FNANTRDI 10
FNA RD+
Sbjct: 26 FNAGERDL 33
>sp|MCP_HHV7J|MAJOR capsid protein|Human herpesvirus 7 (strain JI)
Query: 1 VLFNANTRD 9
VL+N N RD
Sbjct: 1219 VLYNINHRD 1227
>sp|FUS_HENDH|FUSION glycoprotein F0|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LFNANTRDI 10
L+N NT D+
Sbjct: 96 LYNNNTHDL 104
>sp|VL2_HPV35|MINOR capsid protein L2|Human papillomavirus 35
Query: 1 VLFNANT 7
++FN+NT
Sbjct: 413 IVFNSNT 419
>sp|DUT_MONPV|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Monkeypox virus (MPXV)
Query: 3 FNANTRD 9
FN NT D
Sbjct: 108 FNVNTGD 114
>sp|DUT_CWPXG|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Cowpox virus (strain GRI-90 /
Query: 3 FNANTRD 9
FN NT D
Sbjct: 104 FNVNTGD 110
24|SequenceR|125|116|VCPPWVLFNA
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 CPPWVLFNA 10
CPP LFN+
Sbjct: 211 CPPLELFNS 219
>sp|L_HTRV|RNA-DIRECTED RNA polymerase L|Heartland virus (HTRV)
Query: 3 PPWVL 7
PPWV+
Sbjct: 333 PPWVV 337
>sp|TRX1_HHV8P|TRIPLEX capsid protein 1|Human herpesvirus 8 type P
Query: 2 CPPWVLF 8
C PW +F
Sbjct: 324 CGPWTVF 330
>sp|L_NIPAV|RNA-DIRECTED RNA polymerase L|Nipah virus
Query: 3 PPWVL 7
PPW++
Sbjct: 1682 PPWII 1686
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 3 PPWVL 7
PPW++
Sbjct: 1682 PPWII 1686
>sp|L_TOSV|RNA-DIRECTED RNA polymerase L|Toscana virus (Tos)
Query: 3 PPWV 6
PPWV
Sbjct: 330 PPWV 333
>sp|UL13_VZVO|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PPWVL 7
PPWV
Sbjct: 101 PPWVF 105
>sp|UL13_VZVD|SERINE/THREONINE-PROTEIN kinase UL13 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 PPWVL 7
PPWV
Sbjct: 101 PPWVF 105
>sp|NRAM_I02A1|NEURAMINIDASE A virus (strain A/Guinea
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|PKG1_ADE07|PACKAGING protein 1|Human adenovirus B serotype 7
Query: 2 CPPWVLFN 9
C WV++N
Sbjct: 384 CYDWVIYN 391
>sp|NRAM_I79A4|NEURAMINIDASE A virus (strain A/Kiev/59/1979
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I54A2|NEURAMINIDASE A virus (strain A/Malaysia:Malaya/302/1954
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I96A3|NEURAMINIDASE A virus (strain A/China:Nanchang/11/1996
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I96A2|NEURAMINIDASE A virus (strain A/USA:Memphis/10/1996
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I77AB|NEURAMINIDASE A virus (strain A/USSR/90/1977
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I77AA|NEURAMINIDASE A virus (strain A/Brazil/11/1978
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I51A0|NEURAMINIDASE A virus (strain A/USA:Albany/12/1951
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I07A0|NEURAMINIDASE A virus (strain A/USA:Texas/UR06-0195/2007
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I83A1|NEURAMINIDASE A virus (strain A/Chile/1/1983
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I80AA|NEURAMINIDASE A virus (strain A/India/6263/1980
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I54A0|NEURAMINIDASE A virus (strain A/Leningrad/1/1954
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I06A0|NEURAMINIDASE A virus (strain A/Russia:St.Petersburg/8/2006
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I00A1|NEURAMINIDASE A virus (strain A/New
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 CPPWVL 7
C PW L
Sbjct: 1296 CSPWTL 1301
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 CPPWVL 7
C PW L
Sbjct: 1296 CSPWTL 1301
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 CPPWVL 7
C PW L
Sbjct: 1296 CSPWTL 1301
>sp|UL32_HHV11|PACKAGING protein UL32|Human herpesvirus 1 (strain 17)
Query: 4 PWVLFN 9
PWVLF
Sbjct: 511 PWVLFG 516
>sp|NRAM_I04A1|NEURAMINIDASE A virus (strain A/Vietnam/1203/2004
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|HEMA_INBVK|HEMAGGLUTININ B virus (strain B/Victoria/2/1987)
Query: 2 CPPWV 6
CP WV
Sbjct: 336 CPIWV 340
>sp|HEMA_INBMD|HEMAGGLUTININ B virus (strain B/Maryland/1959)
Query: 2 CPPWV 6
CP WV
Sbjct: 325 CPIWV 329
>sp|HEMA_INBLE|HEMAGGLUTININ B virus (strain B/Lee/1940)
Query: 2 CPPWV 6
CP WV
Sbjct: 335 CPIWV 339
>sp|HEMA_INBBE|HEMAGGLUTININ B virus (strain B/Beijing/1/1987)
Query: 2 CPPWV 6
CP WV
Sbjct: 336 CPIWV 340
>sp|CAPSD_HBOC1|MINOR capsid protein VP1|Primate bocaparvovirus 1 (strain Human
Query: 1 VCPPWVLFN 9
V PW FN
Sbjct: 219 VTTPWTYFN 227
>sp|UL32_HHV2H|PACKAGING protein UL32|Human herpesvirus 2 (strain HG52)
Query: 4 PWVLFN 9
PWVLF
Sbjct: 513 PWVLFG 518
>sp|NRAM_I02A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|HEMA_INBVI|HEMAGGLUTININ B virus (strain B/Victoria/3/1985)
Query: 2 CPPWV 6
CP WV
Sbjct: 329 CPIWV 333
>sp|HEMA_INBBO|HEMAGGLUTININ B virus (strain B/Bonn/1943)
Query: 2 CPPWV 6
CP WV
Sbjct: 326 CPIWV 330
>sp|NRAM_I03A1|NEURAMINIDASE A virus (strain A/Chicken/Shantou/4231/2003
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|NRAM_I02A7|NEURAMINIDASE A virus (strain A/Teal/China/2978.1/2002
Query: 4 PWVLFN 9
PWV FN
Sbjct: 287 PWVSFN 292
>sp|NRAM_I02A4|NEURAMINIDASE A virus (strain A/Silky
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|NRAM_I01A0|NEURAMINIDASE A virus (strain A/Silky
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|HEMA_INBSI|HEMAGGLUTININ B virus (strain B/Singapore/222/1979)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|NRAM_I02A6|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|NRAM_I02A5|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|NRAM_I02A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 282 PWVSFN 287
>sp|HEMA_INBOR|HEMAGGLUTININ B virus (strain B/Oregon/5/1980)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBME|HEMAGGLUTININ B virus (strain B/Memphis/6/1986)
Query: 2 CPPWV 6
CP WV
Sbjct: 329 CPIWV 333
>sp|HEMA_INBHK|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 CPPWV 6
CP WV
Sbjct: 326 CPIWV 330
>sp|NRAM_I03A0|NEURAMINIDASE A virus (strain A/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|HEMA_INBEN|HEMAGGLUTININ B virus (strain B/England/222/1982)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|NRAM_I96A0|NEURAMINIDASE A virus (strain A/Goose/Guangdong/1/1996
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I59A0|NEURAMINIDASE A virus (strain A/Chicken/Scotland/1959
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|HEMA_INBUS|HEMAGGLUTININ B virus (strain B/USSR/100/1983)
Query: 2 CPPWV 6
CP WV
Sbjct: 327 CPIWV 331
>sp|NRAM_I05A1|NEURAMINIDASE A virus (strain A/Goose/Guangxi/345/2005
Query: 4 PWVLFN 9
PWV FN
Sbjct: 274 PWVSFN 279
>sp|NRAM_I01A2|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I00A0|NEURAMINIDASE A virus (strain A/Duck/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|NRAM_I01A3|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 302 PWVSFN 307
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 1 VCPPW 5
VC PW
Sbjct: 242 VCRPW 246
>sp|NRAM_I97A0|NEURAMINIDASE A virus (strain A/Chicken/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 283 PWVSFN 288
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 3 PPWV 6
PPWV
Sbjct: 57 PPWV 60
>sp|NRAM_I97A1|NEURAMINIDASE A virus (strain A/Hong
Query: 4 PWVLFN 9
PWV FN
Sbjct: 283 PWVSFN 288
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas)
Query: 3 PPWV 6
PPWV
Sbjct: 57 PPWV 60
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCVPWI 501
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCVPWI 501
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCVPWI 501
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 497 LCVPWI 502
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCVPWI 501
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 497 LCVPWI 502
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCVPWI 501
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 497 LCVPWI 502
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 499 LCVPWI 504
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCVPWI 501
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 5 WVLFN 9
WVL+N
Sbjct: 982 WVLYN 986
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 5 WVLFN 9
WVL+N
Sbjct: 982 WVLYN 986
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 498 LCVPWI 503
>sp|HEMA_INBF8|HEMAGGLUTININ B virus (strain B/Finland/150/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBF7|HEMAGGLUTININ B virus (strain B/Finland/149/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBF6|HEMAGGLUTININ B virus (strain B/Finland/148/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 5 WVLFN 9
WVL+N
Sbjct: 982 WVLYN 986
>sp|HEMA_INBF9|HEMAGGLUTININ B virus (strain B/Finland/151/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|PKG1_ADE40|PACKAGING protein 1|Human adenovirus F serotype 40
Query: 2 CPPWVLFN 9
C W+++N
Sbjct: 383 CYDWIIYN 390
>sp|HEMA_INB|HEMAGGLUTININ B virus (strain B/ID/1986)
Query: 2 CPPWV 6
CP WV
Sbjct: 332 CPIWV 336
>sp|HEMA_INBVM|HEMAGGLUTININ B virus (strain B/Victoria/19/1989)
Query: 2 CPPWV 6
CP WV
Sbjct: 336 CPIWV 340
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 498 LCVPWI 503
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 PPWV 6
PPWV
Sbjct: 94 PPWV 97
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 PPWV 6
PPWV
Sbjct: 94 PPWV 97
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 PPWV 6
PPWV
Sbjct: 94 PPWV 97
>sp|HEMA_INBP3|HEMAGGLUTININ B virus (strain B/Paris/329/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 336 CPIWV 340
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 VCPPWVLFN 9
V PW FN
Sbjct: 219 VSTPWSYFN 227
>sp|PKG1_ADE05|PACKAGING protein 1|Human adenovirus C serotype 5
Query: 2 CPPWVLFN 9
C W+++N
Sbjct: 384 CYDWIIYN 391
>sp|PKG1_ADE02|PACKAGING protein 1|Human adenovirus C serotype 2
Query: 2 CPPWVLFN 9
C W+++N
Sbjct: 384 CYDWIIYN 391
>sp|HEMA_INBNA|HEMAGGLUTININ B virus (strain B/Nagasaki/1/1987)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBIN|HEMAGGLUTININ B virus (strain B/India/3/1989)
Query: 2 CPPWV 6
CP WV
Sbjct: 336 CPIWV 340
>sp|HEMA_INBGL|HEMAGGLUTININ B virus (strain B/GL/1954)
Query: 2 CPPWV 6
CP WV
Sbjct: 329 CPIWV 333
>sp|HEMA_INBF5|HEMAGGLUTININ B virus (strain B/Finland/147/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBF4|HEMAGGLUTININ B virus (strain B/Finland/146/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBF3|HEMAGGLUTININ B virus (strain B/Finland/145/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|CAPSD_HBOC4|MINOR capsid protein VP1|Human bocavirus 4 (HBoV4) (Human
Query: 1 VCPPWVLFN 9
V PW FN
Sbjct: 220 VSTPWSYFN 228
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 5 WVLFN 9
W LFN
Sbjct: 1025 WALFN 1029
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 497 LCIPWI 502
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCIPWI 501
>sp|PKG1_ADE12|PACKAGING protein 1|Human adenovirus A serotype 12
Query: 2 CPPWVLFN 9
C W+++N
Sbjct: 386 CYDWIIYN 393
>sp|HEMA_INBSJ|HEMAGGLUTININ B virus (strain B/Singapore/1964)
Query: 2 CPPWV 6
CP WV
Sbjct: 331 CPIWV 335
>sp|HEMA_INBF2|HEMAGGLUTININ B virus (strain B/Finland/56/1988)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|F9_ORFN2|PROTEIN F9 homolog|Orf virus (strain NZ2) (OV
Query: 2 CPPWVLFNA 10
PPW L A
Sbjct: 32 TPPWTLLLA 40
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 498 LCIPWI 503
>sp|CAPSD_HBOC3|MINOR capsid protein VP1|Human bocavirus 3 (HBoV3) (Adelavirus
Query: 1 VCPPWVLFN 9
V PW FN
Sbjct: 220 VSTPWSYFN 228
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 496 LCIPWI 501
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 5 WVLFN 9
W LFN
Sbjct: 1025 WALFN 1029
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 498 LCIPWI 503
>sp|HEMA_INBSD|HEMAGGLUTININ B virus (strain B/South
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|VC15_VACCC|PROTEIN C15/B21|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 VCPPWVLF 8
VCP +LF
Sbjct: 29 VCPSSLLF 36
>sp|HEMA_INBIB|HEMAGGLUTININ B virus (strain B/Ibaraki/2/1985)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBHM|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBHL|HEMAGGLUTININ B virus (strain B/Hong
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBGD|HEMAGGLUTININ B virus (strain B/Guangdong/55/1989)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBYB|HEMAGGLUTININ B virus (strain B/Yamagata/16/1988)
Query: 2 CPPWV 6
CP WV
Sbjct: 319 CPIWV 323
>sp|HEMA_INBTE|HEMAGGLUTININ B virus (strain B/Texas/1/1991)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBP9|HEMAGGLUTININ B virus (strain B/Panama/45/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBNY|HEMAGGLUTININ B virus (strain B/New
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBF1|HEMAGGLUTININ B virus (strain B/Finland/24/1985)
Query: 2 CPPWV 6
CP WV
Sbjct: 321 CPIWV 325
>sp|HEMA_INBAA|HEMAGGLUTININ B virus (strain B/Ann
Query: 2 CPPWV 6
CP WV
Sbjct: 328 CPIWV 332
>sp|HEMA_INBTF|HEMAGGLUTININ B virus (strain B/Texas/4/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBBK|HEMAGGLUTININ B virus (strain B/Bangkok/163/1990)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|HEMA_INBVL|HEMAGGLUTININ B virus (strain B/Victoria/103/1989)
Query: 2 CPPWV 6
CP WV
Sbjct: 334 CPIWV 338
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 5 WVLFN 9
W+L+N
Sbjct: 980 WILYN 984
>sp|HEMA_INBFU|HEMAGGLUTININ B virus (strain B/Fukuoka/80/1981)
Query: 2 CPPWV 6
CP WV
Sbjct: 319 CPIWV 323
>sp|POLG_ZIKVF|GENOME polyprotein|Zika virus (isolate ZIKV/Human/French
Query: 2 CPPWVL 7
C PW L
Sbjct: 1582 CGPWKL 1587
>sp|GAG_XMRV4|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 3 PPWV 6
PPWV
Sbjct: 94 PPWV 97
>sp|GAG_XMRV3|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 3 PPWV 6
PPWV
Sbjct: 94 PPWV 97
>sp|POLG_ZIKVK|GENOME polyprotein|Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010)
Query: 2 CPPWVL 7
C PW L
Sbjct: 1582 CGPWKL 1587
>sp|GAG_XMRV6|GAG polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 3 PPWV 6
PPWV
Sbjct: 94 PPWV 97
>sp|POLG_ZIKV|GENOME polyprotein|Zika virus (ZIKV)
Query: 2 CPPWVL 7
C PW L
Sbjct: 1578 CGPWKL 1583
>sp|OBP_HHV2H|REPLICATION origin-binding protein|Human herpesvirus 2 (strain HG52)
Query: 1 VCPPWVLF 8
V P W LF
Sbjct: 653 VAPVWELF 660
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 CPPWV 6
CP W+
Sbjct: 167 CPEWM 171
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related
Query: 2 CPPWV 6
CP W+
Sbjct: 167 CPEWM 171
>sp|POLG_EC16H|GENOME polyprotein|Echovirus 16 (strain Harrington)
Query: 1 VCPPWV 6
+C PW+
Sbjct: 498 LCVPWI 503
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 WVLFN 9
W+L+N
Sbjct: 976 WILYN 980
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 WVLFN 9
W+L+N
Sbjct: 976 WILYN 980
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 PPWVL 7
PPW++
Sbjct: 605 PPWLM 609
25|SequenceR|130|121|CRQVEVCPPW
>sp|VL2_HPV15|MINOR capsid protein L2|Human papillomavirus 15
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV37|MINOR capsid protein L2|Human papillomavirus 37
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV17|MINOR capsid protein L2|Human papillomavirus 17
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV16|MINOR capsid protein L2|Human papillomavirus type 16
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 22 CKQAGTCPP 30
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV39|MINOR capsid protein L2|Human papillomavirus 39
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 21 CKQSGTCPP 29
>sp|VL2_HPV34|MINOR capsid protein L2|Human papillomavirus type 34
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 23 CKQSGTCPP 31
>sp|VL2_HPV70|MINOR capsid protein L2|Human papillomavirus type 70
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 21 CKQSGTCPP 29
>sp|VL2_HPV2A|MINOR capsid protein L2|Human papillomavirus type 2a
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 20 CKQAGTCPP 28
>sp|VL2_HPV57|MINOR capsid protein L2|Human papillomavirus 57
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 20 CKQAGTCPP 28
>sp|VL2_HPVME|MINOR capsid protein L2|Human papillomavirus type ME180
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 21 CKQSGTCPP 29
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 1 CRQVEVCPP 9
CRQ+E+ P
Sbjct: 2486 CRQIEIPAP 2494
>sp|VL2_HPV27|MINOR capsid protein L2|Human papillomavirus 27
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGTCPP 27
>sp|VL2_HPV45|MINOR capsid protein L2|Human papillomavirus 45
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 21 CKQSGTCPP 29
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 21 CKQSGTCPP 29
>sp|VL2_HPV49|MINOR capsid protein L2|Human papillomavirus type 49
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 19 CKQAGNCPP 27
>sp|VL2_HPV61|MINOR capsid protein L2|Human papillomavirus type 61
Query: 1 CRQVEVCPP 9
C+Q CPP
Sbjct: 18 CKQSGTCPP 26
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 CRQVEV 6
CRQVE+
Sbjct: 2398 CRQVEI 2403
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 1 CRQVEVCP 8
C+Q CP
Sbjct: 19 CKQAGTCP 26
>sp|X_HBVB5|PROTEIN X|Hepatitis B virus genotype B2
Query: 1 CRQVEVCPP 9
CR VCPP
Sbjct: 137 CRHKLVCPP 145
>sp|VL2_HPV30|MINOR capsid protein L2|Human papillomavirus 30
Query: 1 CRQVEVCP 8
C+Q CP
Sbjct: 21 CKQAGTCP 28
>sp|NS1_HBOC1|INITIATOR protein NS1|Primate bocaparvovirus 1 (strain Human
Query: 3 QVEVCPP 9
QV+ CPP
Sbjct: 654 QVDYCPP 660
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 2 RQVEVCPP 9
+ VEV PP
Sbjct: 1178 KPVEVVPP 1185
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 2 RQVEVCPP 9
RQV + PP
Sbjct: 985 RQVPLVPP 992
>sp|HEPA_HHV8P|DNA helicase/primase complex-associated protein|Human herpesvirus 8
Query: 1 CRQVEVCPP 9
C + VCPP
Sbjct: 587 CEGIPVCPP 595
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 4 VEVCPP 9
V VCPP
Sbjct: 676 VVVCPP 681
>sp|RIR1_HHV11|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Human herpesvirus 1 (strain 17)
Query: 6 VCPPW 10
VC PW
Sbjct: 242 VCRPW 246
>sp|VL1_HPV12|MAJOR capsid protein L1|Human papillomavirus 12
Query: 6 VCPP 9
VCPP
Sbjct: 184 VCPP 187
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 VEVCPP 9
VEV PP
Sbjct: 292 VEVAPP 297
>sp|VL2_HPV53|MINOR capsid protein L2|Human papillomavirus type 53
Query: 1 CRQVEVCP 8
C+Q CP
Sbjct: 21 CKQSGTCP 28
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 1 CRQVEVC 7
C+Q ++C
Sbjct: 150 CKQTQLC 156
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 1 CRQVEVCP 8
C QV CP
Sbjct: 189 CGQVICCP 196
26|SequenceR|135|126|NCCGSCRQVE
>sp|PB2_INBP9|POLYMERASE basic protein 2|Influenza B virus (strain B/Panama/45/1990)
Query: 3 CGSCRQV 9
CG CR +
Sbjct: 369 CGECRGI 375
>sp|PB2_INBLE|POLYMERASE basic protein 2|Influenza B virus (strain B/Lee/1940)
Query: 3 CGSCRQV 9
CG CR +
Sbjct: 369 CGECRGI 375
>sp|PB2_INBAD|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 CGSCRQV 9
CG CR +
Sbjct: 369 CGECRGI 375
>sp|PB2_INBAC|POLYMERASE basic protein 2|Influenza B virus (strain B/Ann
Query: 3 CGSCRQV 9
CG CR +
Sbjct: 369 CGECRGI 375
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1207 NTCAQCQQ 1214
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1208 NTCAQCQQ 1215
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1209 NTCAQCQQ 1216
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1207 NTCAQCQQ 1214
>sp|VU4_HHV7J|PROTEIN U4|Human herpesvirus 7 (strain JI)
Query: 3 CGSCRQ 8
CG CR+
Sbjct: 224 CGECRK 229
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1209 NSCAQCQQ 1216
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1208 NSCAQCQQ 1215
>sp|DNBI_HCMVM|MAJOR DNA-binding protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CCGSCRQ 8
CC +C Q
Sbjct: 479 CCHTCYQ 485
Query: 3 CGSCRQV 9
CG+C Q+
Sbjct: 430 CGTCPQL 436
>sp|DNBI_HCMVA|MAJOR DNA-binding protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 CCGSCRQ 8
CC +C Q
Sbjct: 479 CCHTCYQ 485
Query: 3 CGSCRQV 9
CG+C Q+
Sbjct: 430 CGTCPQL 436
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 3 CGSCRQV 9
C SC+Q+
Sbjct: 1078 CPSCQQI 1084
>sp|DPOL_HHV7J|DNA polymerase catalytic subunit|Human herpesvirus 7 (strain JI)
Query: 4 GSCRQVE 10
G+C Q+E
Sbjct: 323 GTCEQIE 329
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 2 CCGSC 6
CCG C
Sbjct: 1323 CCGCC 1327
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 2 CCGSC 6
CC SC
Sbjct: 1083 CCRSC 1087
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 2 CCGSC 6
CC SC
Sbjct: 1103 CCRSC 1107
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 2 CCGSC 6
CC SC
Sbjct: 1099 CCRSC 1103
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 2 CCGSC 6
CC SC
Sbjct: 1105 CCRSC 1109
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 2 CCGSC 6
CC SC
Sbjct: 1100 CCRSC 1104
>sp|POLG_STEVM|GENOME polyprotein|St. louis encephalitis virus (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1101 CCRSC 1105
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1105 CCRSC 1109
>sp|POLG_KUNJM|GENOME polyprotein|Kunjin virus (strain MRM61C)
Query: 2 CCGSC 6
CC SC
Sbjct: 1103 CCRSC 1107
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 2 CCGSC 6
CC SC
Sbjct: 1098 CCRSC 1102
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 2 CCGSC 6
CC SC
Sbjct: 1034 CCRSC 1038
>sp|POLG_JAEVM|GENOME polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLG_JAEV5|GENOME polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLG_DEN4T|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1086 CCRSC 1090
>sp|POLG_DEN4S|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1086 CCRSC 1090
>sp|POLG_DEN4P|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1086 CCRSC 1090
>sp|POLG_DEN4H|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1086 CCRSC 1090
>sp|POLG_DEN4D|GENOME polyprotein|Dengue virus type 4 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1086 CCRSC 1090
>sp|POLG_DEN3S|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1085 CCRSC 1089
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1085 CCRSC 1089
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1085 CCRSC 1089
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1085 CCRSC 1089
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1085 CCRSC 1089
>sp|POLG_DEN2T|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 807 CCRSC 811
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1086 CCRSC 1090
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 2 CCGSC 6
CC SC
Sbjct: 1087 CCRSC 1091
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 2 CCGSC 6
CC SC
Sbjct: 1075 CCRSC 1079
>sp|VE1_HPV60|REPLICATION protein E1|Human papillomavirus type 60
Query: 2 CCGSCRQ 8
CC C Q
Sbjct: 389 CCDDCNQ 395
>sp|DNBI_HHV6U|MAJOR DNA-binding protein|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 CCGSC 6
CC SC
Sbjct: 471 CCQSC 475
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 6 CRQVE 10
CRQVE
Sbjct: 2398 CRQVE 2402
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3392 CGSCGSV 3398
Query: 3 CGSC 6
CGSC
Sbjct: 338 CGSC 341
>sp|DNBI_HHV6Z|MAJOR DNA-binding protein|Human herpesvirus 6B (strain Z29)
Query: 2 CCGSC 6
CC SC
Sbjct: 471 CCQSC 475
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1208 NSCDKCQQ 1215
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1206 NSCDKCQQ 1213
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1207 NSCDKCQQ 1214
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 2 CCGSC 6
CC SC
Sbjct: 471 CCHSC 475
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3392 CGSCGSV 3398
Query: 3 CGSC 6
CGSC
Sbjct: 338 CGSC 341
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 NCCGSCRQ 8
N C C+Q
Sbjct: 1208 NTCTQCQQ 1215
>sp|R1A_CVHN2|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N2)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3446 CGSCGSV 3452
>sp|UL56_HHV2H|PROTEIN UL56|Human herpesvirus 2 (strain HG52)
Query: 2 CCGSCRQ 8
C G+CR
Sbjct: 210 CGGTCRH 216
>sp|R1A_CVHN5|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N5)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3426 CGSCGSV 3432
>sp|R1A_CVHN1|REPLICASE polyprotein 1a|Human coronavirus HKU1 (isolate N1)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3476 CGSCGSV 3482
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 6 CRQVE 10
CRQ+E
Sbjct: 2486 CRQIE 2490
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3388 CGSCGSV 3394
>sp|POLG_YEFV8|GENOME polyprotein|Yellow fever virus (isolate Peru/1899/1981)
Query: 2 CCGSC 6
CC SC
Sbjct: 1090 CCRSC 1094
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3388 CGSCGSV 3394
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3446 CGSCGSV 3452
>sp|R1AB_CVHN5|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N5)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3426 CGSCGSV 3432
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 3 CGSCRQV 9
CGSC V
Sbjct: 3476 CGSCGSV 3482
>sp|POLS_JAEVJ|STRUCTURAL polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLS_JAEV1|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLS_JAEV5|STRUCTURAL polyprotein|Japanese encephalitis virus (strain SA(v))
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|POLS_JAEVM|STRUCTURAL polyprotein|Japanese encephalitis virus (strain M28)
Query: 2 CCGSC 6
CC SC
Sbjct: 1106 CCRSC 1110
>sp|R1A_SARS2|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NCCGSCR 7
+CC CR
Sbjct: 4325 SCCLYCR 4331
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NCCGSCR 7
+CC CR
Sbjct: 4325 SCCLYCR 4331
>sp|PB2_INCJJ|POLYMERASE basic protein 2|Influenza C virus (strain C/JJ/1950)
Query: 1 NCCGSC 6
N CG C
Sbjct: 106 NFCGPC 111
>sp|PB2_INCJH|POLYMERASE basic protein 2|Influenza C virus (strain C/Johannesburg/1/1966)
Query: 1 NCCGSC 6
N CG C
Sbjct: 106 NFCGPC 111
>sp|PB2_INCBE|POLYMERASE basic protein 2|Influenza C virus (strain C/Berlin/1/1985)
Query: 1 NCCGSC 6
N CG C
Sbjct: 106 NFCGPC 111
>sp|PB2_INCAA|POLYMERASE basic protein 2|Influenza C virus (strain C/Ann
Query: 1 NCCGSC 6
N CG C
Sbjct: 106 NFCGPC 111
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 1 NCCGSCR 7
+CC CR
Sbjct: 4302 SCCLYCR 4308
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 1 NCCGSCR 7
+CC CR
Sbjct: 4302 SCCLYCR 4308
27|SequenceR|140|131|QVNRNNCCGS
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 4 RNNCC 8
R+NCC
Sbjct: 1425 RDNCC 1429
>sp|PG138_VARV|25 kDa core protein OPG138|Variola virus
Query: 1 QVNRNNCC 8
Q+N N+CC
Sbjct: 176 QINPNDCC 183
>sp|PG138_VAR67|25 kDa core protein OPG138|Variola virus (isolate
Query: 1 QVNRNNCC 8
Q+N N+CC
Sbjct: 176 QINPNDCC 183
>sp|NSS_PTPV|NON-STRUCTURAL protein NS-S|Punta toro phlebovirus
Query: 4 RNNCCGS 10
R++CC S
Sbjct: 211 RDDCCQS 217
>sp|PG138_VACCC|25 kDa core protein OPG138|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QVNRNNCC 8
Q+N ++CC
Sbjct: 179 QINPDDCC 186
>sp|PG138_VACCA|25 kDa core protein OPG138|Vaccinia virus (strain Ankara) (VACV)
Query: 1 QVNRNNCC 8
Q+N ++CC
Sbjct: 174 QINPDDCC 181
>sp|PG138_MONPV|25 kDa core protein OPG138|Monkeypox virus (MPXV)
Query: 1 QVNRNNCC 8
Q+N ++CC
Sbjct: 177 QINPDDCC 184
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QVNRNNCCGS 10
++ R NC G+
Sbjct: 205 EIARKNCGGN 214
>sp|L_SABVB|RNA-DIRECTED RNA polymerase L|Sabia mammarenavirus (isolate
Query: 2 VNRNNCC 8
VN+ CC
Sbjct: 1649 VNKCGCC 1655
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QVNRNNC 7
+ RNNC
Sbjct: 1068 KATRNNC 1074
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 QVNRNNCCG 9
++ RN C G
Sbjct: 1038 KLGRNGCLG 1046
>sp|U147A_HCMVM|UNCHARACTERIZED protein UL147A|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 QVNRNNCCGS 10
++N N+C S
Sbjct: 26 EINENSCSSS 35
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 1 QVNRNNCCG 9
++ RN C G
Sbjct: 715 KLGRNGCLG 723
>sp|ATI_COWPX|A-TYPE inclusion protein A25 homolog|Cowpox virus (CPV)
Query: 1 QVNRNNCCGS 10
++ R NC G+
Sbjct: 1092 EIARKNCGGN 1101
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 QVNRNNC 7
+ RNNC
Sbjct: 1068 KATRNNC 1074
28|SequenceR|145|136|QTPRCQVNRN
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 TPRCQVN 8
TPRC VN
Sbjct: 606 TPRCLVN 612
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 QTPRCQVNRN 10
QTP ++NRN
Sbjct: 510 QTPTIRMNRN 519
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PRCQV 7
PRCQV
Sbjct: 1036 PRCQV 1040
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PRCQV 7
PRCQV
Sbjct: 1036 PRCQV 1040
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PRCQV 7
PRCQV
Sbjct: 1036 PRCQV 1040
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 605 TPRCMVD 611
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 610 TPRCMVD 616
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCMVD 610
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCMVD 610
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCMVD 610
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCMVD 610
>sp|MC160_MCV1|PROTEIN MC160|Molluscum contagiosum virus subtype 1
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 126 TPRCLVD 132
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 3 PRCQVNRN 10
P C+VN N
Sbjct: 568 PPCEVNTN 575
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 608 TPRCLVD 614
>sp|C2_CWPXG|KELCH repeat protein C2|Cowpox virus (strain GRI-90 /
Query: 1 QTPRCQV 7
+TP+C V
Sbjct: 488 ETPKCNV 494
>sp|VC02_VACCC|KELCH repeat protein C2|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 QTPRCQV 7
+TP+C V
Sbjct: 488 ETPKCNV 494
>sp|POLG_HCVJK|GENOME polyprotein|Hepatitis C virus genotype 3k
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 609 TPRCLVD 615
>sp|VC02_VACCT|KELCH repeat protein C2|Vaccinia virus (strain Tian Tan)
Query: 1 QTPRCQV 7
+TP+C V
Sbjct: 488 ETPKCNV 494
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 608 TPRCLVD 614
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TPRCQVNRN 10
T RC VN++
Sbjct: 139 TGRCTVNKH 147
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 2 TPRCQVNRN 10
T RC VN++
Sbjct: 139 TGRCTVNKH 147
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 612 TPRCLVD 618
>sp|TRX1_HHV11|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain 17)
Query: 1 QTPRCQVN 8
QTPRC
Sbjct: 382 QTPRCSAG 389
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVD 610
>sp|TRX1_HHV14|TRIPLEX capsid protein 1|Human herpesvirus 1 (strain A44)
Query: 1 QTPRCQVN 8
QTPRC
Sbjct: 382 QTPRCSAG 389
>sp|RIR1_EBVG|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PRCQVN 8
PRC VN
Sbjct: 411 PRCLVN 416
>sp|RIR1_EBVB9|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 PRCQVN 8
PRC VN
Sbjct: 411 PRCLVN 416
>sp|RIR1_EBVA8|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 3 PRCQVN 8
PRC VN
Sbjct: 411 PRCLVN 416
>sp|POLG_HCVR6|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVD 610
>sp|POLG_HCVK3|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 610 TPRCLVD 616
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 602 TPRCLVD 608
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 609 TPRCLVD 615
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVD 610
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVD 610
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVD 610
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 608 TPRCLVD 614
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 609 TPRCLVD 615
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 608 TPRCLVD 614
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 2 TPRCQVNR 9
+P C +NR
Sbjct: 412 SPTCSINR 419
>sp|VE5B_HPV6C|PROBABLE protein E5B|Human papillomavirus type 6c
Query: 4 RCQVNRN 10
+C+ NRN
Sbjct: 48 KCKSNRN 54
>sp|VE5B_HPV11|PROBABLE protein E5B|Human papillomavirus 11
Query: 4 RCQVNRN 10
+C+ NRN
Sbjct: 48 KCKSNRN 54
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 2 TPRCQVNR 9
+P C VNR
Sbjct: 407 SPTCLVNR 414
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 605 TPRCLVH 611
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 3 PRCQVNRN 10
P+CQ RN
Sbjct: 101 PQCQGKRN 108
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVH 610
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 605 TPRCLVH 611
>sp|HEMA_I33A0|HEMAGGLUTININ A virus (strain A/Wilson-Smith/1933
Query: 1 QTPRCQVNRN 10
QTP+ +N N
Sbjct: 296 QTPQGSINSN 305
>sp|POLG_HCVGL|GENOME polyprotein|Hepatitis C virus (isolate Glasgow)
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 604 TPRCLVD 610
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 QTPRCQVNRN 10
Q P ++NRN
Sbjct: 510 QNPTTRMNRN 519
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 TPRCQVN 8
TPRC V+
Sbjct: 608 TPRCLVD 614
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 3 PRCQVNR 9
PRC V R
Sbjct: 499 PRCDVPR 505
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 2 TPRCQVNR 9
+P C +NR
Sbjct: 412 SPTCLINR 419
Query: 2 TPRCQVNRN 10
TP CQ + N
Sbjct: 910 TPVCQFDGN 918
>sp|TRS1_HCMVM|PROTEIN TRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPRCQVN 8
TPR Q+N
Sbjct: 149 TPRSQMN 155
>sp|TRS1_HCMVA|PROTEIN HHLF1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 TPRCQVN 8
TPR Q+N
Sbjct: 149 TPRSQMN 155
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 2 TPRCQVNR 9
+P C +NR
Sbjct: 412 SPTCLINR 419
Query: 2 TPRCQVNRN 10
TP CQ + N
Sbjct: 910 TPVCQFDGN 918
>sp|TRX1_HHV2G|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain G)
Query: 1 QTPRCQVN 8
Q+PRC +
Sbjct: 383 QSPRCSAS 390
>sp|TRX1_HHV2H|TRIPLEX capsid protein 1|Human herpesvirus 2 (strain HG52)
Query: 1 QTPRCQVN 8
Q+PRC +
Sbjct: 383 QSPRCSAS 390
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 2 TPRCQVNR 9
+P C +NR
Sbjct: 412 SPTCLINR 419
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 2 TPRCQVNRN 10
TP CQ + N
Sbjct: 95 TPVCQFDGN 103
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 TPRCQVN 8
TP+C V+
Sbjct: 608 TPKCMVD 614
>sp|IRS1_HCMVM|PROTEIN IRS1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 TPRCQVN 8
TPR Q+N
Sbjct: 149 TPRSQMN 155
>sp|CAP8_ADE41|PRE-HEXON-LINKING protein VIII|Human adenovirus F serotype 41
Query: 2 TPRCQVN 8
TPR Q+N
Sbjct: 64 TPRSQLN 70
29|SequenceR|150|141|PRLQVQTPRC
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 PRLQVQTPR 9
PRL V+ PR
Sbjct: 42 PRLGVRAPR 50
>sp|LF3_EBVG|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 50 RLQPATPR 57
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 84 RLQPATPR 91
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 118 RLQPATPR 125
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 152 RLQPATPR 159
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 186 RLQPATPR 193
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 220 RLQPATPR 227
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 254 RLQPATPR 261
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 288 RLQPATPR 295
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 322 RLQPATPR 329
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 356 RLQPATPR 363
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 390 RLQPATPR 397
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 424 RLQPATPR 431
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 458 RLQPATPR 465
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 492 RLQPATPR 499
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 526 RLQPATPR 533
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 560 RLQPATPR 567
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 594 RLQPATPR 601
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 628 RLQPATPR 635
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 662 RLQPATPR 669
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 696 RLQPATPR 703
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 730 RLQPATPR 737
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 764 RLQPATPR 771
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 798 RLQPATPR 805
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 832 RLQPATPR 839
>sp|LF3_EBVB9|UNCHARACTERIZED protein LF3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 50 RLQPATPR 57
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 84 RLQPATPR 91
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 118 RLQPATPR 125
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 152 RLQPATPR 159
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 186 RLQPATPR 193
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 220 RLQPATPR 227
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 254 RLQPATPR 261
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 288 RLQPATPR 295
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 322 RLQPATPR 329
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 356 RLQPATPR 363
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 390 RLQPATPR 397
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 424 RLQPATPR 431
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 458 RLQPATPR 465
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 492 RLQPATPR 499
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 526 RLQPATPR 533
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 560 RLQPATPR 567
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 594 RLQPATPR 601
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 628 RLQPATPR 635
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 662 RLQPATPR 669
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 696 RLQPATPR 703
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 730 RLQPATPR 737
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 764 RLQPATPR 771
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 798 RLQPATPR 805
Query: 2 RLQVQTPR 9
RLQ TPR
Sbjct: 832 RLQPATPR 839
>sp|POLG_SVSAP|GENOME polyprotein|Sapporo virus (isolate
Query: 2 RLQVQTP 8
RLQV TP
Sbjct: 1411 RLQVVTP 1417
>sp|POLG_SVM93|GENOME polyprotein|Sapporo virus (strain Human/United
Query: 2 RLQVQTP 8
RLQV TP
Sbjct: 1411 RLQVVTP 1417
30|SequenceR|155|146|KRVQVPRLQV
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 4 QVPRLQ 9
QVPRLQ
Sbjct: 63 QVPRLQ 68
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 KRVQVPRLQV 10
K+V + RLQV
Sbjct: 2469 KKVTIDRLQV 2478
>sp|VP1_POVKI|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 350)
Query: 2 RVQVPRLQV 10
R QVPR+Q
Sbjct: 16 RSQVPRVQT 24
>sp|VP1_POVK6|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 60)
Query: 2 RVQVPRLQV 10
R QVPR+Q
Sbjct: 16 RSQVPRVQT 24
>sp|VP1_POVK3|MAJOR capsid protein VP1|KI polyomavirus (isolate Stockholm 380)
Query: 2 RVQVPRLQV 10
R QVPR+Q
Sbjct: 16 RSQVPRVQT 24
>sp|DUT_HCMVA|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human cytomegalovirus (strain
Query: 2 RVQVPRLQV 10
R+QVP+L V
Sbjct: 172 RLQVPQLDV 180
31|SequenceR|160|151|RVIEIKRVQV
>sp|LTP_HHV2H|LARGE tegument protein deneddylase|Human herpesvirus 2 (strain HG52)
Query: 2 VIEIKRVQ 9
V+E++R+Q
Sbjct: 1348 VVELRRLQ 1355
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 2 VIEIKRVQ 9
V+E++R+Q
Sbjct: 1378 VVELRRLQ 1385
32|SequenceR|165|156|FIPKKRVIEI
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 PKKRVIE 9
PK+RV+E
Sbjct: 490 PKRRVVE 496
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Dumas)
Query: 1 FIPKKRVIEI 10
FIP+ RV+ +
Sbjct: 1132 FIPETRVVNV 1141
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 FIPKKRVIEI 10
FIP+ RV+ +
Sbjct: 1132 FIPETRVVNV 1141
>sp|VL2_HPV18|MINOR capsid protein L2|Human papillomavirus type 18
Query: 1 FIPKKR 6
FIPKKR
Sbjct: 443 FIPKKR 448
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 1 FIPKKRVIEI 10
F+P ++ IE+
Sbjct: 1666 FVPARKYIEV 1675
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 1 FIPKKRVIEI 10
F+P ++ IE+
Sbjct: 1666 FVPARKYIEV 1675
>sp|L_CHAV|RNA-DIRECTED RNA polymerase L|Chandipura virus (strain I653514) (CHPV)
Query: 2 IPKKRVIE 9
IP K+V+E
Sbjct: 479 IPSKKVLE 486
>sp|POLG_DEN3P|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IPKKRVIEI 10
IP+ RVI++
Sbjct: 2562 IPEGRVIDL 2570
>sp|POLG_DEN3M|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IPKKRVIEI 10
IP+ RVI++
Sbjct: 2562 IPEGRVIDL 2570
>sp|POLG_DEN3I|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IPKKRVIEI 10
IP+ RVI++
Sbjct: 2562 IPEGRVIDL 2570
>sp|POLG_DEN3C|GENOME polyprotein|Dengue virus type 3 (strain
Query: 2 IPKKRVIEI 10
IP+ RVI++
Sbjct: 2562 IPEGRVIDL 2570
33|SequenceR|170|161|VTAKKFIPKK
>sp|VP4_ROTHM|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 TAKKFIPKK 10
++KKFIPK+
Sbjct: 662 SSKKFIPKR 670
>sp|VP3_ROTHK|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
Query: 1 VTAKKFIPK 9
+T K+FIPK
Sbjct: 419 ITIKRFIPK 427
>sp|VP3_ROTHT|PROTEIN VP3|Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6])
Query: 1 VTAKKFIPK 9
+T K+FIPK
Sbjct: 419 ITIKRFIPK 427
>sp|VP3_ROTHP|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8])
Query: 1 VTAKKFIPK 9
+T K+FIPK
Sbjct: 419 ITIKRFIPK 427
>sp|VP3_ROTHW|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8])
Query: 1 VTAKKFIPK 9
+T K+FIPK
Sbjct: 419 ITIKRFIPK 427
>sp|VP3_ROTAD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8])
Query: 1 VTAKKFIPK 9
+T K+FIPK
Sbjct: 419 ITIKRFIPK 427
>sp|VP3_ROTYO|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)
Query: 1 VTAKKFIPK 9
+T K+FIPK
Sbjct: 419 ITIKRFIPK 427
>sp|VP4_ROTH3|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 TAKKFIPKK 10
+++KFIPK+
Sbjct: 662 SSEKFIPKR 670
>sp|VP4_ROTHJ|OUTER capsid protein VP4|Rotavirus A (strain
Query: 2 TAKKFIPKK 10
+++KFIPK+
Sbjct: 662 SSEKFIPKR 670
>sp|VP4_ROTHT|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 2 TAKKFIPKK 10
+++KFIPK+
Sbjct: 662 SSEKFIPKR 670
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 TAKKFIPKK 10
+++KFIPK+
Sbjct: 663 SSEKFIPKR 671
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 5 KFIPKK 10
KFIPKK
Sbjct: 726 KFIPKK 731
>sp|VP4_ROTHK|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTH5|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTAD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTWI|OUTER capsid protein VP4|Rotavirus A (isolate RVA/Human/United
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTHV|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTHP|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTHD|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTHL|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTYO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP4_ROTHW|OUTER capsid protein VP4|Rotavirus A (strain RVA/Human/United
Query: 3 AKKFIPKK 10
++KFIPK+
Sbjct: 663 SEKFIPKR 670
>sp|VP3_ROTHU|PROTEIN VP3|Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
Query: 2 TAKKFIPK 9
T K+F+PK
Sbjct: 420 TIKRFVPK 427
>sp|VP3_ROTWI|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 1 VTAKKFIPK 9
+ K+FIPK
Sbjct: 419 INIKRFIPK 427
>sp|VP4_ROTH1|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 TAKKFIPKK 10
+++KF+PK+
Sbjct: 662 SSEKFLPKR 670
>sp|VP3_ROT41|PROTEIN VP3|Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14])
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|U90_HHV6Z|PROTEIN U90|Human herpesvirus 6B (strain Z29)
Query: 5 KFIPKK 10
KF+PKK
Sbjct: 863 KFVPKK 868
>sp|VP3_ROTH6|PROTEIN VP3|Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10])
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|VP3_ROTH7|PROTEIN VP3|Rotavirus A (isolate RVA/Human/United
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|VP3_ROTHL|PROTEIN VP3|Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4])
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|VP3_ROTHD|PROTEIN VP3|Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4])
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|VP3_ROTHS|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|VP3_ROTH3|PROTEIN VP3|Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
Query: 4 KKFIPK 9
K+FIPK
Sbjct: 422 KRFIPK 427
>sp|E320_ADE1A|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 4 KKFIPKK 10
KKF PKK
Sbjct: 166 KKFHPKK 172
>sp|E320_ADE1P|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 11
Query: 4 KKFIPKK 10
KKF PKK
Sbjct: 166 KKFHPKK 172
>sp|E320_ADE35|EARLY E3 20.3 kDa glycoprotein|Human adenovirus B serotype 35
Query: 4 KKFIPKK 10
KKF PKK
Sbjct: 166 KKFHPKK 172
34|SequenceR|175|166|HDELTVTAKK
***** No hits found ******
35|SequenceR|180|171|CKCALHDELT
>sp|PG153_VAR67|ENVELOP protein OPG153|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 CKCALHDELT 10
CK LH +LT
Sbjct: 162 CKQILHGQLT 171
>sp|PG153_MONPV|ENVELOP protein OPG153|Monkeypox virus (MPXV)
Query: 1 CKCALHDELT 10
CK LH +LT
Sbjct: 162 CKQILHGQLT 171
>sp|A26_VACCC|PUTATIVE A-type inclusion protein|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CKCALHDELT 10
CK LH +LT
Sbjct: 162 CKQILHGQLT 171
>sp|POLG_HCVTR|GENOME polyprotein|Hepatitis C virus genotype 3b
Query: 1 CKCALHDELT 10
CK L DE+T
Sbjct: 2145 CKPLLRDEIT 2154
>sp|R1AB_SARS2|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 LHDELT 10
LHDELT
Sbjct: 5283 LHDELT 5288
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 5 LHDELT 10
LHDELT
Sbjct: 5260 LHDELT 5265
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 ALHDEL 9
ALHDEL
Sbjct: 2104 ALHDEL 2109
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 CKCALHDELT 10
CK L DE+T
Sbjct: 2141 CKPILRDEVT 2150
>sp|POLG_HCVCO|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CALHDEL 9
CA+H EL
Sbjct: 878 CAIHPEL 884
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 CKCALHDELT 10
CK L DE+T
Sbjct: 2141 CKPLLRDEVT 2150
Query: 2 KCALHD 7
+C LHD
Sbjct: 655 RCELHD 660
>sp|POLG_HCVH9|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 1 CKCALHDELT 10
CK L DE+T
Sbjct: 2137 CKPLLRDEVT 2146
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 1 CKCALHDELT 10
CK L DE+T
Sbjct: 2142 CKPLLRDEVT 2151
Query: 2 KCALHD 7
+C LHD
Sbjct: 656 RCELHD 661
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CALHDEL 9
CA+H EL
Sbjct: 878 CAVHPEL 884
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CALHDEL 9
CA+H EL
Sbjct: 878 CAVHPEL 884
>sp|POLG_HCVBK|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CALHDEL 9
CA+H EL
Sbjct: 878 CAVHPEL 884
>sp|GH_VZVO|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Oka vaccine)
Query: 5 LHDELT 10
LHDEL+
Sbjct: 433 LHDELS 438
>sp|GH_VZVD|ENVELOPE glycoprotein H|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 5 LHDELT 10
LHDEL+
Sbjct: 433 LHDELS 438
>sp|RIR1_HHV7J|RIBONUCLEOSIDE-DIPHOSPHATE reductase large subunit-like protein|Human herpesvirus 7 (strain
Query: 2 KCALHDE 8
KC HDE
Sbjct: 18 KCLCHDE 24
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 2 KCALHDEL 9
K LHDEL
Sbjct: 1007 KQPLHDEL 1014
>sp|DNLI_VARV|DNA ligase|Variola virus
Query: 2 KCALHDELT 10
KC+ HD+ T
Sbjct: 450 KCSGHDDNT 458
>sp|DNLI_VAR67|DNA ligase|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 2 KCALHDELT 10
KC+ HD+ T
Sbjct: 450 KCSGHDDNT 458
>sp|DNLI_VACCC|DNA ligase|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 KCALHDELT 10
KC+ HD+ T
Sbjct: 450 KCSGHDDNT 458
>sp|DNLI_VACCA|DNA ligase|Vaccinia virus (strain Ankara) (VACV)
Query: 2 KCALHDELT 10
KC+ HD+ T
Sbjct: 450 KCSGHDDNT 458
>sp|DNLI_MONPV|DNA ligase|Monkeypox virus (MPXV)
Query: 2 KCALHDELT 10
KC+ HD+ T
Sbjct: 452 KCSGHDDNT 460
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 4 ALHDEL 9
ALHDE+
Sbjct: 2349 ALHDEV 2354
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 1 CKCALHDELT 10
CK L DE++
Sbjct: 2139 CKPLLRDEIS 2148
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 3 CALHDELT 10
CA DELT
Sbjct: 197 CADEDELT 204
>sp|IE61_VZVD|E3 ubiquitin-protein ligase IE61|Varicella-zoster virus (strain Dumas)
Query: 2 KCALHD 7
+C LHD
Sbjct: 298 RCLLHD 303
>sp|ETF2_VARV|EARLY transcription factor 82 kDa|Variola virus
Query: 3 CALHDE 8
C LHD+
Sbjct: 445 CFLHDQ 450
>sp|ETF2_VAR67|EARLY transcription factor 82 kDa|Variola virus (isolate
Query: 3 CALHDE 8
C LHD+
Sbjct: 445 CFLHDQ 450
>sp|ETF2_VACCT|EARLY transcription factor 82 kDa|Vaccinia virus (strain Tian Tan)
Query: 3 CALHDE 8
C LHD+
Sbjct: 445 CFLHDQ 450
>sp|ETF2_VACCC|EARLY transcription factor 82 kDa|Vaccinia virus (strain Copenhagen)
Query: 3 CALHDE 8
C LHD+
Sbjct: 445 CFLHDQ 450
>sp|ETF2_VACCA|EARLY transcription factor 82 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 CALHDE 8
C LHD+
Sbjct: 445 CFLHDQ 450
>sp|ETF2_MONPV|EARLY transcription factor 82 kDa|Monkeypox virus (MPXV)
Query: 3 CALHDE 8
C LHD+
Sbjct: 445 CFLHDQ 450
>sp|VLTF1_VAR67|LATE transcription factor 1|Variola virus (isolate
Query: 1 CKCALHDE 8
C C+ H++
Sbjct: 77 CLCSFHND 84
>sp|VLTF1_VACCC|LATE transcription factor 1|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 CKCALHDE 8
C C+ H++
Sbjct: 77 CLCSFHND 84
>sp|VLTF1_VACCA|LATE transcription factor 1|Vaccinia virus (strain Ankara) (VACV)
Query: 1 CKCALHDE 8
C C+ H++
Sbjct: 77 CLCSFHND 84
>sp|POLG_HCVED|GENOME polyprotein|Hepatitis C virus genotype 4a
Query: 1 CKCALHDELT 10
CK L DE++
Sbjct: 2137 CKPLLRDEVS 2146
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 3 CALHDEL 9
CA H EL
Sbjct: 878 CAAHPEL 884
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 1 CKCALHDELT 10
CK L DE++
Sbjct: 2138 CKPLLRDEVS 2147
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 CKCALHDE 8
C C HD+
Sbjct: 278 CSCYGHDQ 285
>sp|POLG_HCVT5|GENOME polyprotein|Hepatitis C virus genotype 6b
Query: 1 CKCALHDELT 10
CK L DE++
Sbjct: 2142 CKPLLRDEVS 2151
36|SequenceR|185|176|AAVTECKCAL
>sp|M2_I80A2|MATRIX protein 2|Influenza A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I78A3|MATRIX protein 2|Influenza A virus (strain A/Mallard/New
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I77A9|MATRIX protein 2|Influenza A virus (strain A/Equine/New
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I02A1|MATRIX protein 2|Influenza A virus (strain A/Guinea
Query: 5 ECKCA 9
ECKC+
Sbjct: 9 ECKCS 13
>sp|M2_I82A7|MATRIX protein 2|Influenza A virus (strain A/Swine/Hong
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I02A4|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I02A2|MATRIX protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I85A3|MATRIX protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I01A0|MATRIX protein 2|Influenza A virus (strain A/Silky
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|M2_I96A0|MATRIX protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 5 ECKCA 9
ECKC+
Sbjct: 16 ECKCS 20
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 AAVTECKCA 9
+A+ EC+C+
Sbjct: 528 SALVECECS 536
>sp|VP4_ROTHO|OUTER capsid protein VP4|Rotavirus A (strain
Query: 5 ECKC 8
ECKC
Sbjct: 212 ECKC 215
>sp|KBTB1_VACCC|KELCH repeat and BTB domain-containing|Vaccinia virus (strain Copenhagen)
Query: 1 AAVTECK 7
+A+TEC+
Sbjct: 105 SAITECE 111
>sp|KBTB1_HSPV|KELCH repeat and BTB domain-containing|Horsepox virus (HSPV)
Query: 1 AAVTECK 7
+A+TEC+
Sbjct: 105 SAITECE 111
>sp|KBTB1_CWPXG|KELCH repeat and BTB domain-containing|Cowpox virus (strain GRI-90 /
Query: 1 AAVTECK 7
+A+TEC+
Sbjct: 105 SAITECE 111
>sp|KBTB1_CWPXB|KELCH repeat and BTB domain-containing|Cowpox virus (strain Brighton Red)
Query: 1 AAVTECK 7
+A+TEC+
Sbjct: 105 SAITECE 111
>sp|PAP1_MCV1|POLY(A) polymerase catalytic subunit|Molluscum contagiosum virus subtype 1
Query: 5 ECKCAL 10
EC+C L
Sbjct: 346 ECRCYL 351
>sp|VP1_POVBK|MAJOR capsid protein VP1|BK polyomavirus (BKPyV) (Human polyomavirus
Query: 2 AVTECKCAL 10
A+TE +C L
Sbjct: 44 AITEVECFL 52
>sp|VP1_POVBA|MAJOR capsid protein VP1|BK polyomavirus (strain AS) (BKPyV)
Query: 2 AVTECKCAL 10
A+TE +C L
Sbjct: 44 AITEVECFL 52
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 3 VTECKCAL 10
V EC C++
Sbjct: 301 VQECNCSI 308
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 3 VTECKCAL 10
V EC C++
Sbjct: 301 VQECNCSI 308
>sp|POLG_HCVJF|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 3 VTECKCAL 10
V EC C++
Sbjct: 301 VQECNCSI 308
>sp|POLG_HCVH4|GENOME polyprotein|Hepatitis C virus (isolate HCV-476)
Query: 3 VTECKCAL 10
V +C C+L
Sbjct: 301 VQDCNCSL 308
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 VTECKCAL 10
V EC C++
Sbjct: 301 VQECNCSI 308
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 3 VTECKCAL 10
V EC C++
Sbjct: 301 VQECNCSI 308
37|SequenceR|190|181|TVPRAAAVTE
>sp|VE2_HPV39|REGULATORY protein E2|Human papillomavirus 39
Query: 3 PRAAAVTE 10
PR AVTE
Sbjct: 249 PRQCAVTE 256
>sp|VE8E2_HPV39|PROTEIN E8^E2C|Human papillomavirus 39
Query: 3 PRAAAVTE 10
PR AVTE
Sbjct: 54 PRQCAVTE 61
>sp|BDLF2_EBVG|PROTEIN BDLF2|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 TVPRAAAV 8
TVP AAAV
Sbjct: 60 TVPAAAAV 67
>sp|BDLF2_EBVB9|PROTEIN BDLF2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 TVPRAAAV 8
TVP AAAV
Sbjct: 60 TVPAAAAV 67
>sp|BDLF2_EBVA8|PROTEIN BDLF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 TVPRAAAV 8
TVP AAAV
Sbjct: 60 TVPAAAAV 67
38|SequenceR|195|186|GGPSRTVPRA
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GPSRTVPR 9
GPS VPR
Sbjct: 17 GPSSKVPR 24
>sp|VIE1_HCMVT|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 2 GPSRTVPR 9
GPS VPR
Sbjct: 17 GPSSKVPR 24
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 GPSRTVPR 9
GPS VPR
Sbjct: 17 GPSSKVPR 24
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 1 GGPSRTVPR 9
GGP R VP+
Sbjct: 12 GGPPRRVPK 20
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 GGPSRTVPR 9
GGP R VP+
Sbjct: 12 GGPPRRVPK 20
>sp|VIE2_HCMVT|VIRAL transcription factor IE2|Human cytomegalovirus (strain Towne)
Query: 2 GPSRTVPR 9
GPS VPR
Sbjct: 17 GPSSKVPR 24
>sp|VIE2_HCMVA|VIRAL transcription factor IE2|Human cytomegalovirus (strain AD169)
Query: 2 GPSRTVPR 9
GPS VPR
Sbjct: 17 GPSSKVPR 24
>sp|VIE2_HCMVM|VIRAL transcription factor IE2|Human cytomegalovirus (strain Merlin)
Query: 2 GPSRTVPR 9
GPS VPR
Sbjct: 17 GPSSKVPR 24
>sp|VPX_HV2ST|PROTEIN Vpx|Human immunodeficiency virus type 2
Query: 1 GGPSRTVP 8
GP T+P
Sbjct: 2 AGPRETIP 9
>sp|CAPSD_TTVV5|CAPSID protein|Torque teno virus (isolate Human/Japan/SANBAN/1999)
Query: 2 GPSRTVPR 9
P R VPR
Sbjct: 412 APDRPVPR 419
>sp|ORF24_TTVV7|UNCHARACTERIZED ORF2/4 protein|Torque teno virus (isolate Human/China/CT39F/2001)
Query: 1 GGPSRTVPR 9
G P R++PR
Sbjct: 196 GSPRRSLPR 204
>sp|VL2_HPV40|MINOR capsid protein L2|Human papillomavirus 40
Query: 1 GGPSRTVP 8
G PS T+P
Sbjct: 121 GAPSLTIP 128
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 GGPSRTVP 8
G PS T P
Sbjct: 1802 GAPSETFP 1809
39|SequenceR|200|191|RQEQSGGPSR
>sp|GAG_HV1AN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 2 QEQSGGPS 9
QEQ GGP+
Sbjct: 475 QEQKGGPN 482
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 RQEQSGGPS 9
R EQ+G P+
Sbjct: 214 RSEQNGTPA 222
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 RQEQSGGPS 9
RQ+ SGG S
Sbjct: 703 RQDASGGSS 711
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 RQEQSGGPS 9
RQ+ SGG S
Sbjct: 784 RQDASGGSS 792
>sp|NCAP_PTPV|NUCLEOPROTEIN toro phlebovirus
Query: 4 QSGGPSR 10
+SG PSR
Sbjct: 92 KSGNPSR 98
>sp|C_MEASY|PROTEIN C|Measles virus (strain Yamagata-1) (MeV)
Query: 2 QEQSGGPSR 10
Q++SG P+R
Sbjct: 36 QDRSGPPTR 44
40|SequenceR|205|196|QPTKARQEQS
>sp|VE7_HPV30|PROTEIN E7|Human papillomavirus 30
Query: 1 QPTKARQEQ 9
QP +ARQE+
Sbjct: 46 QPQQARQEE 54
>sp|GB_EBVG|ENVELOPE glycoprotein B|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 QPTKARQEQS 10
QPT RQ+ S
Sbjct: 36 QPTATRQQTS 45
>sp|GB_EBVB9|ENVELOPE glycoprotein B|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 QPTKARQEQS 10
QPT RQ+ S
Sbjct: 36 QPTATRQQTS 45
>sp|GB_EBVA8|ENVELOPE glycoprotein B|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 QPTKARQEQS 10
QPT RQ+ S
Sbjct: 36 QPTATRQQTS 45
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 PTKARQEQS 10
P ++RQ+QS
Sbjct: 2983 PVRSRQQQS 2991
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 2 PTKARQEQS 10
P ++RQ+QS
Sbjct: 2961 PVRSRQQQS 2969
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 2 PTKARQEQS 10
P ++RQ+QS
Sbjct: 2956 PVRSRQQQS 2964
>sp|PHOSP_RABVR|PHOSPHOPROTEIN virus (strain China/MRV) (RABV)
Query: 1 QPTKAR 6
QP+KAR
Sbjct: 167 QPSKAR 172
>sp|PHOSP_RABVC|PHOSPHOPROTEIN virus (strain CVS-11) (RABV)
Query: 1 QPTKAR 6
QP+KAR
Sbjct: 167 QPSKAR 172
>sp|PHOSP_RABVA|PHOSPHOPROTEIN virus (strain PM1503/AVO1) (RABV)
Query: 1 QPTKAR 6
QP+KAR
Sbjct: 167 QPSKAR 172
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 2 PTKARQEQ 9
PTK Q+Q
Sbjct: 621 PTKRNQKQ 628
41|SequenceR|210|201|ITVRTQPTKA
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 3 VRTQPTKA 10
+RTQP +A
Sbjct: 1036 IRTQPMRA 1043
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 2 TVRTQPTK 9
T+RT P K
Sbjct: 1520 TLRTSPEK 1527
42|SequenceR|215|206|VRVTRITVRT
>sp|POLG_JAEV1|GENOME polyprotein|Japanese encephalitis virus (strain SA-14)
Query: 2 RVTRITVRT 10
R T+I VRT
Sbjct: 3169 RKTKIAVRT 3177
>sp|POLG_JAEVJ|GENOME polyprotein|Japanese encephalitis virus (strain Jaoars982)
Query: 2 RVTRITVRT 10
R T+I VRT
Sbjct: 3169 RKTKIAVRT 3177
43|SequenceR|220|211|KPPRRVRVTR
>sp|VL2_HPV14|MINOR capsid protein L2|Human papillomavirus 14
Query: 2 PPRRVRVTR 10
PP RVRVTR
Sbjct: 171 PPSRVRVTR 179
>sp|VL2_HPV21|MINOR capsid protein L2|Human papillomavirus 21
Query: 2 PPRRVRVTR 10
PP RVRVTR
Sbjct: 171 PPSRVRVTR 179
>sp|VL2_HPV19|MINOR capsid protein L2|Human papillomavirus 19
Query: 2 PPRRVRVTR 10
PP RVRVTR
Sbjct: 170 PPSRVRVTR 178
>sp|VL2_HPV08|MINOR capsid protein L2|Human papillomavirus type 8
Query: 2 PPRRVRVTR 10
PP RVRV+R
Sbjct: 171 PPTRVRVSR 179
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 2 PPRRVRVTR 10
PP RVRV+R
Sbjct: 171 PPTRVRVSR 179
>sp|VL2_HPV05|MINOR capsid protein L2|Human papillomavirus 5
Query: 2 PPRRVRVTR 10
PP RVRV+R
Sbjct: 171 PPTRVRVSR 179
>sp|VL2_HPV20|MINOR capsid protein L2|Human papillomavirus 20
Query: 2 PPRRVRVTR 10
PP RVRV+R
Sbjct: 171 PPARVRVSR 179
>sp|POLS_RUBVM|STRUCTURAL polyprotein|Rubella virus (strain M33) (RUBV)
Query: 1 KPPRRVRVT 9
PPR VRVT
Sbjct: 921 APPRNVRVT 929
>sp|POLS_RUBVR|STRUCTURAL polyprotein|Rubella virus (strain RA27/3 vaccine)
Query: 1 KPPRRVRVT 9
PPR VRVT
Sbjct: 921 APPRNVRVT 929
>sp|POLS_RUBVB|STRUCTURAL polyprotein|Rubella virus (strain BRD1) (RUBV)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|VL2_HPV24|MINOR capsid protein L2|Human papillomavirus 24
Query: 2 PPRRVRVTR 10
PP RVRV+R
Sbjct: 171 PPTRVRVSR 179
>sp|POLS_RUBVC|STRUCTURAL polyprotein|Rubella virus (strain BRDII) (RUBV)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|POLS_RUBVD|STRUCTURAL polyprotein|Rubella virus (strain Cendehill) (RUBV)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|POLS_RUBVT|STRUCTURAL polyprotein|Rubella virus (strain Therien) (RUBV)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|POLS_RUBVN|STRUCTURAL polyprotein|Rubella virus (strain RN-UK86) (RUBV)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 2 PPRRVRVTR 10
PP RVR++R
Sbjct: 171 PPTRVRISR 179
>sp|VL2_HPV12|MINOR capsid protein L2|Human papillomavirus 12
Query: 2 PPRRVRVTR 10
PP RVRV R
Sbjct: 171 PPTRVRVAR 179
>sp|RP147_VARV|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus
Query: 3 PRRVRVTR 10
P R+R+T+
Sbjct: 895 PSRIRITK 902
>sp|RP147_VAR67|DNA-DIRECTED RNA polymerase 147 kDa|Variola virus (isolate
Query: 3 PRRVRVTR 10
P R+R+T+
Sbjct: 895 PSRIRITK 902
>sp|RP147_VACCC|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 PRRVRVTR 10
P R+R+T+
Sbjct: 895 PSRIRITK 902
>sp|RP147_VACCA|DNA-DIRECTED RNA polymerase 147 kDa|Vaccinia virus (strain Ankara) (VACV)
Query: 3 PRRVRVTR 10
P R+R+T+
Sbjct: 895 PSRIRITK 902
>sp|RP147_MONPV|DNA-DIRECTED RNA polymerase 147 kDa|Monkeypox virus (MPXV)
Query: 3 PRRVRVTR 10
P R+R+T+
Sbjct: 895 PSRIRITK 902
>sp|POLS_RUBVV|STRUCTURAL polyprotein|Rubella virus (strain TO-336) (RUBV)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|POLS_RUBVO|STRUCTURAL polyprotein|Rubella virus (strain TO-336 vaccine)
Query: 2 PPRRVRVT 9
PPR VRVT
Sbjct: 922 PPRNVRVT 929
>sp|VL2_HPV47|MINOR capsid protein L2|Human papillomavirus 47
Query: 2 PPRRVRVTR 10
PP RVR+ R
Sbjct: 171 PPTRVRIAR 179
>sp|VL2_HPV25|MINOR capsid protein L2|Human papillomavirus 25
Query: 2 PPRRVRVT 9
PP RVRV+
Sbjct: 170 PPSRVRVS 177
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 1 KPPRRV 6
+PPRR+
Sbjct: 818 RPPRRL 823
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 1 KPPRRVRV 8
KP +RVRV
Sbjct: 557 KPAKRVRV 564
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 3 PRRVRVT 9
PR VR+T
Sbjct: 1590 PRTVRIT 1596
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 2 PPRRV 6
PPRRV
Sbjct: 14 PPRRV 18
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 2 PPRRV 6
PPRRV
Sbjct: 14 PPRRV 18
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 2 PPRRV 6
PPRRV
Sbjct: 14 PPRRV 18
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 2 PPRRV 6
PPRRV
Sbjct: 14 PPRRV 18
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 PPRRVRVTR 10
PP R+RV +
Sbjct: 702 PPERLRVHK 710
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 3 PRRVRVT 9
PR VR+T
Sbjct: 1590 PRTVRIT 1596
>sp|VL2_HPV23|MINOR capsid protein L2|Human papillomavirus 23
Query: 1 KPPRRVRVTR 10
PP R VTR
Sbjct: 166 NPPTRFSVTR 175
44|SequenceR|225|216|KRHKGKPPRR
>sp|POLG_SAFV|GENOME polyprotein|Saffold virus (SafV) (Human TMEV-like
Query: 1 KRHKGKPP 8
+RHKGK P
Sbjct: 181 QRHKGKHP 188
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 RHKGKPPRR 10
RH GK P+R
Sbjct: 631 RHVGKCPKR 639
>sp|NCAP_MEASZ|NUCLEOPROTEIN virus (strain Edmonston-Zagreb vaccine)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASW|NUCLEOPROTEIN virus (strain Edmonston-Schwarz vaccine)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASM|NUCLEOPROTEIN virus (strain Edmonston-Moraten vaccine)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASH|NUCLEOPROTEIN virus (strain Halle) (MeV)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASF|NUCLEOPROTEIN virus (strain Edmonston B)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASA|NUCLEOPROTEIN virus (strain Edmonston-AIK-C vaccine)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASC|NUCLEOPROTEIN virus (strain Ichinose-B95a) (MeV)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASE|NUCLEOPROTEIN virus (strain Edmonston) (MeV)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASY|NUCLEOPROTEIN virus (strain Yamagata-1) (MeV)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASI|NUCLEOPROTEIN virus (strain IP-3-Ca) (MeV)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|NCAP_MEASS|NUCLEOPROTEIN virus (strain Shanghai-191 vaccine)
Query: 1 KRHKGKPP 8
KR+K KPP
Sbjct: 12 KRNKDKPP 19
>sp|POLG_LANVY|GENOME polyprotein|Langat virus (strain Yelantsev)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_LIVK|GENOME polyprotein|Louping ill virus (isolate Grouses/Scotland/K/1980)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_TBEVW|GENOME polyprotein|Tick-borne encephalitis virus European subtype
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_TBEVH|GENOME polyprotein|Tick-borne encephalitis virus (strain Hypr)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|ENV_HV2UC|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 1 KRHKGKP 7
++H+G+P
Sbjct: 727 RKHRGQP 733
>sp|POLG_TBEVS|GENOME polyprotein|Tick-borne encephalitis virus Far Eastern
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_LIV|GENOME polyprotein|Louping ill virus (LIV)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 10 GGPPRR 15
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 5 GKPPRR 10
G PPRR
Sbjct: 12 GGPPRR 17
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 KRHKGKPPRR 10
K+H+ KPP +
Sbjct: 149 KQHQNKPPNK 158
>sp|E321_ADE35|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 35
Query: 2 RHKGKPPRR 10
+HKG P R
Sbjct: 176 KHKGDPLLR 184
>sp|E321_ADE1P|EARLY E3 20.6 kDa glycoprotein|Human adenovirus B serotype 11
Query: 2 RHKGKPPRR 10
+HKG P R
Sbjct: 176 KHKGDPLLR 184
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 4 KGKPPRR 10
KG PP R
Sbjct: 699 KGHPPER 705
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 3 HKGKPPRR 10
HKG+P R
Sbjct: 1143 HKGRPRIR 1150
>sp|U95_HHV6U|UNCHARACTERIZED protein U95|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 HKGKPPRR 10
HKG+P R
Sbjct: 1052 HKGRPRIR 1059
>sp|GD_HHV11|ENVELOPE glycoprotein D|Human herpesvirus 1 (strain 17)
Query: 1 KRHKGKPPRR 10
+RH K P+R
Sbjct: 365 RRHTQKAPKR 374
>sp|POLN_HEVCT|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 4
Query: 1 KRHKGKP 7
K+H G+P
Sbjct: 1528 KKHSGEP 1534
>sp|POLN_HEVMY|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRHKGKP 7
K+H G+P
Sbjct: 1514 KKHSGEP 1520
>sp|POL_HV1AN|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 805 KKHQKEPP 812
>sp|POLN_HEVBU|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRHKGKP 7
K+H G+P
Sbjct: 1514 KKHSGEP 1520
>sp|POLN_HEVCH|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRHKGKP 7
K+H G+P
Sbjct: 1514 KKHSGEP 1520
>sp|NP03_HHV2H|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain HG52)
Query: 1 KRHKGKPPRR 10
+R +G PP+R
Sbjct: 144 QRKRGAPPQR 153
>sp|NP03_HHV23|NUCLEAR phosphoprotein UL3|Human herpesvirus 2 (strain 333)
Query: 1 KRHKGKPPRR 10
+R +G PP+R
Sbjct: 144 QRKRGAPPQR 153
>sp|POL_HV1RH|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 807 KKHQKEPP 814
>sp|POLN_HEVPA|NON-STRUCTURAL polyprotein pORF1|Hepatitis E virus genotype 1
Query: 1 KRHKGKP 7
K+H G+P
Sbjct: 1514 KKHSGEP 1520
>sp|POL_HV1ND|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 803 KKHQKEPP 810
>sp|POL_HV1MA|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 811 KKHQKEPP 818
>sp|POL_HV1JR|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 810 KKHQKEPP 817
>sp|POL_HV1B9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 806 KKHQKEPP 813
>sp|POL_HV1A2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 KRHKGKPP 8
K+H+ +PP
Sbjct: 808 KKHQKEPP 815
45|SequenceR|230|221|HTHKFKRHKG
>sp|VE2_HPV69|REGULATORY protein E2|Human papillomavirus 69
Query: 3 HKFKRHKG 10
++FK+HKG
Sbjct: 309 YRFKKHKG 316
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 3 HKFKRHKG 10
H F +HKG
Sbjct: 1616 HAFMKHKG 1623
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 3 HKFKRHKG 10
H F +HKG
Sbjct: 1616 HAFMKHKG 1623
>sp|VE2_HPV26|REGULATORY protein E2|Human papillomavirus type 26
Query: 3 HKFKRHKG 10
++FK+HKG
Sbjct: 314 YRFKKHKG 321
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 2 THKFKRHK 9
TH KRHK
Sbjct: 2095 THDGKRHK 2102
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 2 THKFKRHKG 10
+HKF H+G
Sbjct: 254 SHKFSFHEG 262
>sp|NCAP_ISFV|NUCLEOPROTEIN virus (ISFV)
Query: 3 HKFKRH 8
HKFK H
Sbjct: 204 HKFKNH 209
>sp|MCP_EBVG|MAJOR capsid protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 HTHKFKRHKG 10
H H F+ H G
Sbjct: 788 HDHDFRLHLG 797
>sp|MCP_EBVB9|MAJOR capsid protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 HTHKFKRHKG 10
H H F+ H G
Sbjct: 788 HDHDFRLHLG 797
>sp|MCP_EBVA8|MAJOR capsid protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 HTHKFKRHKG 10
H H F+ H G
Sbjct: 788 HDHDFRLHLG 797
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HTHKFKRH 8
H H FK H
Sbjct: 418 HDHPFKSH 425
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HTHKFKRH 8
H H FK H
Sbjct: 418 HDHPFKSH 425
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HTHKFKRH 8
H H FK H
Sbjct: 418 HDHPFKSH 425
>sp|L_VSIVC|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HTHKFKRH 8
H H FK H
Sbjct: 418 HDHPFKSH 425
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 HTHKFKRH 8
H H FK H
Sbjct: 418 HDHPFKSH 425
>sp|POL_HTL1A|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 HTHKFK 6
H+H+FK
Sbjct: 989 HSHRFK 994
>sp|POL_HTL1L|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 HTHKFK 6
H+H+FK
Sbjct: 989 HSHRFK 994
>sp|POL_HTL1C|GAG-PRO-POL polyprotein|Human T-cell leukemia virus 1
Query: 1 HTHKFK 6
H+H+FK
Sbjct: 989 HSHRFK 994
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 HTHKFKRHK 9
HTH R+K
Sbjct: 2002 HTHHIYRNK 2010
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 3 HKFKRH 8
H F+RH
Sbjct: 256 HGFRRH 261
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 3 HKFKRHK 9
H FK+H+
Sbjct: 203 HMFKKHE 209
>sp|NCAP_VSIVS|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 HKFKRHK 9
H FK+H+
Sbjct: 203 HMFKKHE 209
>sp|NCAP_VSIVN|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 HKFKRHK 9
H FK+H+
Sbjct: 203 HMFKKHE 209
>sp|NCAP_VSIVG|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 HKFKRHK 9
H FK+H+
Sbjct: 203 HMFKKHE 209
>sp|NCAP_VSIVC|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 HKFKRHK 9
H FK+H+
Sbjct: 203 HMFKKHE 209
>sp|NCAP_VSIVA|NUCLEOPROTEIN stomatitis Indiana virus (strain
Query: 3 HKFKRHK 9
H FK+H+
Sbjct: 203 HMFKKHE 209
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 HTHKFKRHK 9
HTH R+K
Sbjct: 2002 HTHHVYRNK 2010
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 HTHKFKRHK 9
HTH R+K
Sbjct: 2002 HTHHVYRNK 2010
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 HTHKFKRHK 9
HTH R+K
Sbjct: 2002 HTHHVYRNK 2010
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 HTHKFKRHK 9
HTH R+K
Sbjct: 2002 HTHHVYRNK 2010
>sp|VE1_HPV5B|REPLICATION protein E1|Human papillomavirus type 5b
Query: 2 THKFKRHK 9
T +FK HK
Sbjct: 183 TRQFKSHK 190
>sp|VE1_HPV36|REPLICATION protein E1|Human papillomavirus 36
Query: 2 THKFKRHK 9
T +FK HK
Sbjct: 181 TRQFKSHK 188
>sp|PORTL_EBVA8|PORTAL protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 THKFKR 7
TH FKR
Sbjct: 62 THLFKR 67
>sp|PORTL_EBVG|PORTAL protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 THKFKR 7
TH FKR
Sbjct: 62 THLFKR 67
>sp|PORTL_EBVB9|PORTAL protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 THKFKR 7
TH FKR
Sbjct: 62 THLFKR 67
>sp|VE1_HPV05|REPLICATION protein E1|Human papillomavirus 5
Query: 2 THKFKRHK 9
T +FK HK
Sbjct: 183 TRQFKSHK 190
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 HKFKRH 8
HK+K H
Sbjct: 793 HKYKYH 798
>sp|OBP_VZVD|REPLICATION origin-binding protein|Varicella-zoster virus (strain Dumas)
Query: 1 HTHKFKRHK 9
+TH F R K
Sbjct: 432 NTHLFSRFK 440
46|SequenceR|235|226|LATKDHTHKF
>sp|NCAP_HRSVB|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 LATKDHTHKF 10
L T+D HKF
Sbjct: 52 LITEDANHKF 61
>sp|NCAP_HRSV1|NUCLEOPROTEIN respiratory syncytial virus B
Query: 1 LATKDHTHKF 10
L T+D HKF
Sbjct: 52 LITEDANHKF 61
>sp|NCAP_HRSVA|NUCLEOPROTEIN respiratory syncytial virus A
Query: 1 LATKDHTHKF 10
L T+D HKF
Sbjct: 52 LITEDANHKF 61
>sp|NCAP_HRSV|NUCLEOPROTEIN respiratory syncytial virus
Query: 1 LATKDHTHKF 10
L T+D HKF
Sbjct: 52 LITEDANHKF 61
>sp|VP16_VZVD|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 LATKDHTHKF 10
++TKDH F
Sbjct: 121 VSTKDHVEMF 130
>sp|VP16_VZVO|TEGUMENT protein VP16 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 1 LATKDHTHKF 10
++TKDH F
Sbjct: 121 VSTKDHVEMF 130
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 5 DHTHKF 10
DH H+F
Sbjct: 423 DHAHEF 428
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 3 TKDHTHKF 10
TKD HK
Sbjct: 123 TKDDAHKL 130
>sp|DPOL_HHV6U|DNA polymerase catalytic subunit|Human herpesvirus 6A (strain
Query: 5 DHTHKF 10
D TH+F
Sbjct: 613 DETHRF 618
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 5 DHTHKF 10
D TH+F
Sbjct: 613 DETHRF 618
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 3 TKDHTHKF 10
T+DH H
Sbjct: 2101 TQDHVHSL 2108
>sp|CAPSH_ADE09|HEXON protein|Human adenovirus D serotype 9
Query: 2 ATKDHTH 8
A K HTH
Sbjct: 146 ALKTHTH 152
47|SequenceR|241|231|AGLTEKLATKD
>sp|MATRX_MEASY|MATRIX protein|Measles virus (strain Yamagata-1) (MeV)
Query: 1 AGLTEKLA 8
AGL EKLA
Sbjct: 55 AGLNEKLA 62
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 AGLTEKLA 8
AGL EKLA
Sbjct: 1619 AGLQEKLA 1626
>sp|MATRX_MEASU|MATRIX protein|Measles virus (strain Hu2) (MeV)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
>sp|MATRX_MEASI|MATRIX protein|Measles virus (strain IP-3-Ca) (MeV)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
>sp|MATRX_MEASH|MATRIX protein|Measles virus (strain Halle) (MeV)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
>sp|MATRX_MEASC|MATRIX protein|Measles virus (strain Ichinose-B95a) (MeV)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
>sp|MATRX_MEASE|MATRIX protein|Measles virus (strain Edmonston) (MeV)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
>sp|MATRX_MEASA|MATRIX protein|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
>sp|MATRX_MEASB|MATRIX protein|Measles virus (strain Biken) (MeV)
Query: 1 AGLTEKL 7
AGL EKL
Sbjct: 105 AGLNEKL 111
THE END