1|Sequence|1|10|MNRCWALFLS
>sp|MC163_MCV1|APOPTOSIS regulator MC163R|Molluscum contagiosum virus subtype 1
Query: 3 RCWAL 7
RCWAL
Sbjct: 284 RCWAL 288
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 2 NRCWALFLS 10
+RC++L+LS
Sbjct: 551 SRCYSLYLS 559
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 2 NRCWALFLS 10
+RC++++LS
Sbjct: 551 SRCYSIYLS 559
>sp|HELI_EBVB9|DNA replication helicase|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 3 RCWALFLS 10
R WALF++
Sbjct: 288 RNWALFIN 295
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 NRCWALFLS 10
+RC++++LS
Sbjct: 552 SRCYSVYLS 560
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 MNRCWALFLS 10
+N CWA L+
Sbjct: 1008 VNVCWAKTLT 1017
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 1 MNRCW 5
M+RCW
Sbjct: 235 MSRCW 239
>sp|HELI_HHV8P|DNA replication helicase|Human herpesvirus 8 type P
Query: 1 MNRCWALFLS 10
++ WALF++
Sbjct: 285 LDENWALFIN 294
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 1 MNRCWA 6
+N CWA
Sbjct: 1007 VNVCWA 1012
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 1 MNRCWA 6
+N CWA
Sbjct: 1007 VNVCWA 1012
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 MNRCWALFLS 10
+N+C A+F +
Sbjct: 393 INKCHAIFCT 402
>sp|L_TULV|RNA-DIRECTED RNA polymerase L|Tula orthohantavirus (TULV) (Tula virus)
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1061 LNKCSSLF 1068
>sp|L_SINV|RNA-DIRECTED RNA polymerase L|Sin Nombre orthohantavirus (SNV) (Sin
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1062 LNKCSSLF 1069
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1061 LNKCSSLF 1068
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1061 LNKCSSLF 1068
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1062 LNKCSSLF 1069
>sp|L_ANDV|RNA-DIRECTED RNA polymerase L|Andes orthohantavirus (ANDV) (Andes virus)
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1062 LNKCSSLF 1069
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1061 LNKCSSLF 1068
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 3 RCWALFLS 10
+CW FL+
Sbjct: 323 QCWRSFLN 330
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1061 LNKCSSLF 1068
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 1 MNRCWALF 8
+N+C +LF
Sbjct: 1061 LNKCSSLF 1068
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 NRCWA 6
N CWA
Sbjct: 1019 NVCWA 1023
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 NRCWA 6
N CWA
Sbjct: 1019 NVCWA 1023
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 2 NRCWA 6
N CWA
Sbjct: 1013 NVCWA 1017
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 NRCWA 6
N CWA
Sbjct: 1011 NVCWA 1015
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 NRCWA 6
N CWA
Sbjct: 1011 NVCWA 1015
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 NRCWA 6
N CWA
Sbjct: 1011 NVCWA 1015
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRCWA 6
N CWA
Sbjct: 1010 NVCWA 1014
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRCWA 6
N CWA
Sbjct: 1010 NVCWA 1014
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRCWA 6
N CWA
Sbjct: 1010 NVCWA 1014
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 NRCWA 6
N CWA
Sbjct: 1010 NVCWA 1014
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 2 NRCWA 6
N CWA
Sbjct: 1011 NVCWA 1015
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 2 NRCWA 6
N CWA
Sbjct: 1011 NVCWA 1015
>sp|CVC1_HHV7J|CAPSID vertex component 1|Human herpesvirus 7 (strain JI)
Query: 4 CWALFLS 10
C+AL++S
Sbjct: 397 CYALYMS 403
2|Sequence|6|15|ALFLSLCCYL
>sp|A375_VAR67|PROTEIN A37.5 homolog|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 ALFLSLCC 8
+LF+ LCC
Sbjct: 6 SLFMKLCC 13
>sp|POLG_HAVNO|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVLC|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 237 YLSFSCYL 244
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVJ8|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 727 YLSFSCYL 734
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVGA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 712 YLSFSCYL 719
>sp|POLG_HAVCR|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 3 FLSLCCYL 10
+LS CYL
Sbjct: 733 YLSFSCYL 740
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 4 LSLCC 8
LSLCC
Sbjct: 258 LSLCC 262
>sp|GLYCO_RABVB|GLYCOPROTEIN virus (strain silver-haired bat-associated)
Query: 1 ALFLSLCC 8
A+FL CC
Sbjct: 473 AIFLITCC 480
>sp|NEC2_HCMVA|NUCLEAR egress protein 2|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LSLCCYL 10
+SLCC++
Sbjct: 81 VSLCCFV 87
>sp|VIE1_HCMVM|IMMEDIATE early protein IE1|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 6 LCCYL 10
LCCY+
Sbjct: 312 LCCYV 316
>sp|VIE1_HCMVA|IMMEDIATE early protein IE1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 6 LCCYL 10
LCCY+
Sbjct: 312 LCCYV 316
>sp|NEC2_HCMVM|NUCLEAR egress protein 2|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LSLCCYL 10
+SLCC++
Sbjct: 81 VSLCCFV 87
>sp|VE1_HPV24|REPLICATION protein E1|Human papillomavirus 24
Query: 1 ALFLSLCCY 9
A+FL L C+
Sbjct: 230 AMFLYLLCF 238
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 5 SLCCYL 10
+LCC+L
Sbjct: 753 ALCCWL 758
>sp|UL32_EBVB9|PACKAGING protein UL32 homolog|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 ALFLSLCCYL 10
L+ +LCC+L
Sbjct: 249 GLYTALCCHL 258
>sp|NCAP_MABVR|NUCLEOPROTEIN Victoria marburgvirus (strain Ravn-87)
Query: 1 ALFLSLC 7
LFLS C
Sbjct: 130 GLFLSFC 136
>sp|NCAP_MABVP|NUCLEOPROTEIN Victoria marburgvirus (strain Popp-67)
Query: 1 ALFLSLC 7
LFLS C
Sbjct: 130 GLFLSFC 136
>sp|NCAP_MABVO|NUCLEOPROTEIN Victoria marburgvirus (strain Ozolin-75)
Query: 1 ALFLSLC 7
LFLS C
Sbjct: 130 GLFLSFC 136
>sp|NCAP_MABVM|NUCLEOPROTEIN Victoria marburgvirus (strain Musoke-80)
Query: 1 ALFLSLC 7
LFLS C
Sbjct: 130 GLFLSFC 136
>sp|NCAP_MABVA|NUCLEOPROTEIN Victoria marburgvirus (strain Angola/2005)
Query: 1 ALFLSLC 7
LFLS C
Sbjct: 130 GLFLSFC 136
>sp|GLYC_HRSVA|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|GLYC_HRSV5|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|GLYC_HRSV3|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|GLYC_HRSV2|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 2 LFLSLCCY 9
LF+S C Y
Sbjct: 24 LFISSCLY 31
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 LFLSLCCYL 10
+ L LCC L
Sbjct: 1 MVLILCCTL 9
>sp|GB_HHV2H|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain HG52)
Query: 1 ALFLSLCCYL 10
A+F LC +
Sbjct: 727 AMFAGLCAFF 736
>sp|GB_HHV23|ENVELOPE glycoprotein B|Human herpesvirus 2 (strain 333)
Query: 1 ALFLSLCCYL 10
A+F LC +
Sbjct: 727 AMFAGLCAFF 736
>sp|GLYCO_RABVT|GLYCOPROTEIN virus (isolate Human/Algeria/1991) (RABV)
Query: 2 LFLSLCC 8
+FL CC
Sbjct: 474 IFLMTCC 480
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 5 SLCCYL 10
SLCC L
Sbjct: 518 SLCCSL 523
>sp|GLYCO_RABVV|GLYCOPROTEIN virus (strain Vnukovo-32) (RABV)
Query: 2 LFLSLCC 8
+FL CC
Sbjct: 474 IFLMTCC 480
>sp|GLYCO_RABVS|GLYCOPROTEIN virus (strain SAD B19)
Query: 2 LFLSLCC 8
+FL CC
Sbjct: 474 IFLMTCC 480
>sp|GLYCO_RABVH|GLYCOPROTEIN virus (strain HEP-Flury) (RABV)
Query: 2 LFLSLCC 8
+FL CC
Sbjct: 474 IFLMTCC 480
>sp|GLYCO_RABVE|GLYCOPROTEIN virus (strain ERA) (RABV)
Query: 2 LFLSLCC 8
+FL CC
Sbjct: 474 IFLMTCC 480
>sp|GLYCO_RABVN|GLYCOPROTEIN virus (strain Nishigahara RCEH)
Query: 2 LFLSLCC 8
+FL CC
Sbjct: 474 IFLMTCC 480
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 LFLSLC 7
LFL+LC
Sbjct: 7 LFLTLC 12
>sp|E312_ADE05|EARLY E3A 12.5 kDa protein|Human adenovirus C serotype 5
Query: 1 ALFLSLCCYL 10
L LCC+L
Sbjct: 89 GLHQDLCCHL 98
3|Sequence|11|20|LCCYLRLVSA
>sp|ETF2_MCV1|EARLY transcription factor 82 kDa|Molluscum contagiosum virus subtype 1
Query: 2 CCYLR 6
CC+LR
Sbjct: 439 CCFLR 443
>sp|VU55_HHV6Z|UNCHARACTERIZED protein U55|Human herpesvirus 6B (strain Z29)
Query: 3 CYLRL 7
CYLRL
Sbjct: 302 CYLRL 306
>sp|VU55_HHV6U|UNCHARACTERIZED protein U55|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 CYLRL 7
CYLRL
Sbjct: 242 CYLRL 246
>sp|MB43_HHV2H|MEMBRANE protein UL43|Human herpesvirus 2 (strain HG52)
Query: 1 LCCYLRLVSA 10
+C +LRLV
Sbjct: 94 VCAWLRLVGG 103
>sp|GC_VZVD|ENVELOPE glycoprotein C|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CYLRLVSA 10
CY+RL +
Sbjct: 207 CYMRLTTG 214
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 1 LCCYLRLV 8
LCC R+V
Sbjct: 1660 LCCSARMV 1667
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 1 LCCYLRLV 8
LCC R+V
Sbjct: 1660 LCCSARMV 1667
>sp|POLG_HCVJL|GENOME polyprotein|Hepatitis C virus genotype 6g
Query: 1 LCCYLRLVSA 10
L CYL+ ++A
Sbjct: 2724 LTCYLKAMAA 2733
>sp|POLG_ROCV|GENOME polyprotein|Rocio virus (ROCV)
Query: 1 LCCYLRLVSA 10
L C L LVSA
Sbjct: 2253 LICALLLVSA 2262
>sp|PG003_VAR67|ANKYRIN repeat protein OPG003|Variola virus (isolate Human/India/Ind3/1967)
Query: 1 LCCYLR 6
L CYLR
Sbjct: 139 LLCYLR 144
>sp|E1A_ADE40|EARLY E1A protein|Human adenovirus F serotype 40
Query: 3 CYLRL 7
CY+RL
Sbjct: 165 CYMRL 169
>sp|CVC1_VZVD|CAPSID vertex component 1|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 CYLRLVSA 10
CY +LVS
Sbjct: 337 CYAQLVSG 344
>sp|PG003_MONPV|ANKYRIN repeat protein OPG003|Monkeypox virus (MPXV)
Query: 1 LCCYLR 6
L CYLR
Sbjct: 142 LLCYLR 147
>sp|POLG_WNV9|GENOME polyprotein|West Nile virus (strain NY-99)
Query: 1 LCCYLRLVSA 10
L C + LVSA
Sbjct: 2261 LICVMTLVSA 2270
>sp|PG003_VACCC|TRUNCATED Ankyrin repeat protein OPG003|Vaccinia virus (strain Copenhagen)
Query: 1 LCCYLR 6
L CYLR
Sbjct: 172 LLCYLR 177
>sp|POLG_HCVJ4|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LCCYLRLVSA 10
L CYL+ +A
Sbjct: 2712 LTCYLKATAA 2721
>sp|POLG_HCVJT|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LCCYLRLVSA 10
L CYL+ +A
Sbjct: 2712 LTCYLKATAA 2721
>sp|E1A_ADE41|EARLY E1A protein|Human adenovirus F serotype 41
Query: 3 CYLRL 7
CY+RL
Sbjct: 170 CYMRL 174
>sp|POLG_HCVJA|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 1 LCCYLRLVSA 10
L CYL+ +A
Sbjct: 2712 LTCYLKATAA 2721
>sp|UL107_HCMVA|UNCHARACTERIZED protein UL107|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 LCCYLRLVSA 10
L CY+R + A
Sbjct: 132 LFCYMREIIA 141
>sp|PG176_MONPV|PROTEIN OPG176|Monkeypox virus (MPXV)
Query: 1 LCCYLRLVSA 10
+CC R+V A
Sbjct: 154 ICCDSRIVVA 163
>sp|VU3_HHV6Z|PROTEIN U3|Human herpesvirus 6B (strain Z29)
Query: 1 LCCYLRLV 8
+CC RLV
Sbjct: 121 VCCRERLV 128
>sp|PG176_VAR67|PROTEIN OPG176|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 LCCYLRLVSA 10
+CC R+V A
Sbjct: 154 ICCDSRIVVA 163
>sp|PG176_VACCC|PROTEIN OPG176|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 LCCYLRLVSA 10
+CC R+V A
Sbjct: 154 ICCDSRIVVA 163
4|Sequence|16|25|RLVSAEGDPI
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 3 VSAEGDPI 10
VSA GDP+
Sbjct: 962 VSAHGDPM 969
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 RLVSAEGD 8
+++SAEGD
Sbjct: 876 KILSAEGD 883
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 1 RLVSAEGD 8
+++SAEGD
Sbjct: 875 KILSAEGD 882
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 LVSAEGDP 9
LVS++G P
Sbjct: 1856 LVSSDGQP 1863
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 LVSAEGDP 9
LVS++G P
Sbjct: 1856 LVSSDGQP 1863
>sp|CAPSD_HEVRH|CAPSID protein|Hepatitis E virus (isolate Rhesus/HT-4)
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 269 VVSAHGEP 276
>sp|CAPSD_HEVMY|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 401 VVSAHGEP 408
>sp|CAPSD_HEVUS|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 401 VVSANGEP 408
>sp|CAPSD_HEVMG|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 3
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 401 VVSANGEP 408
>sp|CAPSD_HEVPA|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 401 VVSANGEP 408
>sp|CAPSD_HEVCH|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 401 VVSANGEP 408
>sp|CAPSD_HEVBU|PRO-SECRETED protein ORF2|Hepatitis E virus genotype 1
Query: 2 LVSAEGDP 9
+VSA G+P
Sbjct: 401 VVSANGEP 408
5|Sequence|21|30|EGDPIPEELY
>sp|FUS_PI2HT|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 EGDPIPEELY 10
EG PIPE Y
Sbjct: 341 EGSPIPESQY 350
>sp|FUS_PI2HG|FUSION glycoprotein F0|Human parainfluenza 2 virus (strain
Query: 1 EGDPIPEELY 10
EG PIPE Y
Sbjct: 341 EGSPIPESQY 350
>sp|FUS_PI2H|FUSION glycoprotein F0|Human parainfluenza 2 virus (HPIV-2)
Query: 1 EGDPIPEELY 10
EG PIPE Y
Sbjct: 341 EGSPIPESQY 350
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 GDPIPEELY 10
G+P+P+ELY
Sbjct: 265 GEPVPDELY 273
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 2 GDPIPEELY 10
GD IP+ELY
Sbjct: 374 GDTIPDELY 382
>sp|VL1_HPV32|MAJOR capsid protein L1|Human papillomavirus type 32
Query: 2 GDPIPEELY 10
G+P+PE++Y
Sbjct: 265 GEPVPEDMY 273
>sp|VE1_HPV73|REPLICATION protein E1|Human papillomavirus 73
Query: 2 GDPIPEE 8
GDPIPE+
Sbjct: 26 GDPIPED 32
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 2 GDPIPEELY 10
GDP+P +LY
Sbjct: 297 GDPVPGDLY 305
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 GDPIPEELY 10
GD IP+ELY
Sbjct: 280 GDTIPDELY 288
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 GDPIPEELY 10
GD +P+ELY
Sbjct: 281 GDALPDELY 289
>sp|VL1_HPV28|MAJOR capsid protein L1|Human papillomavirus 28
Query: 2 GDPIPEELY 10
GD IPE LY
Sbjct: 267 GDTIPETLY 275
>sp|VL1_HPV70|MAJOR capsid protein L1|Human papillomavirus type 70
Query: 2 GDPIPEELY 10
GD IP ELY
Sbjct: 266 GDTIPSELY 274
>sp|VL1_HPV54|MAJOR capsid protein L1|Human papillomavirus type 54
Query: 2 GDPIPEELY 10
G+P+P +LY
Sbjct: 264 GEPVPNDLY 272
>sp|VL1_HPVME|MAJOR capsid protein L1|Human papillomavirus type ME180
Query: 2 GDPIPEELY 10
GD IP ELY
Sbjct: 268 GDTIPTELY 276
>sp|GP_HTRV|ENVELOPMENT polyprotein|Heartland virus (HTRV)
Query: 2 GDPIPEELY 10
G P+PE+++
Sbjct: 185 GTPVPEDVF 193
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 2 GDPIPEELY 10
GD IP+ LY
Sbjct: 268 GDKIPDSLY 276
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 GDPIPE 7
GDP PE
Sbjct: 1819 GDPFPE 1824
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 GDPIPE 7
GDP PE
Sbjct: 1819 GDPFPE 1824
>sp|VL1_HPV39|MAJOR capsid protein L1|Human papillomavirus 39
Query: 2 GDPIPEELY 10
GD IP +LY
Sbjct: 267 GDAIPAQLY 275
>sp|GLYC_HRSV4|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 EGDPIPEELY 10
EG+P P ++Y
Sbjct: 271 EGNPSPSQVY 280
>sp|VL1_HPV18|MAJOR capsid protein L1|Human papillomavirus type 18
Query: 2 GDPIPEELY 10
GD +P+ LY
Sbjct: 329 GDTVPQSLY 337
>sp|POL_HV1S2|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GDPIPE 7
GDP+PE
Sbjct: 467 GDPLPE 472
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 2 GDPIPEELY 10
GD +P+ LY
Sbjct: 295 GDTVPDALY 303
>sp|POL_HV1S9|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 2 GDPIPE 7
GDP+PE
Sbjct: 467 GDPLPE 472
>sp|GLYC_HRSV7|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 EGDPIPEELY 10
EG+P P ++Y
Sbjct: 271 EGNPSPSQVY 280
>sp|ENV_HV1Z3|TRUNCATED surface protein|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+EL
Sbjct: 77 DPSPQEL 83
>sp|ENV_HV1M2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+EL
Sbjct: 77 DPSPQEL 83
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+EL
Sbjct: 77 DPSPQEL 83
>sp|VL1_HPV07|MAJOR capsid protein L1|Human papillomavirus 7
Query: 2 GDPIPEELY 10
GD +P +LY
Sbjct: 266 GDSVPNDLY 274
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 3 DPIPE 7
DPIPE
Sbjct: 305 DPIPE 309
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 3 DPIPE 7
DPIPE
Sbjct: 305 DPIPE 309
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 2 GDPIPEELY 10
GD +P +LY
Sbjct: 295 GDTVPTDLY 303
>sp|GLYC_HRSV6|MAJOR surface glycoprotein G|Human respiratory syncytial virus A
Query: 1 EGDPIPEELY 10
EG+P P ++Y
Sbjct: 271 EGNPSPSQVY 280
>sp|VL1_HPV11|MAJOR capsid protein L1|Human papillomavirus 11
Query: 2 GDPIPEEL 9
G+P+P++L
Sbjct: 265 GEPVPDDL 272
>sp|VL1_HPV40|MAJOR capsid protein L1|Human papillomavirus 40
Query: 2 GDPIPEELY 10
GD +P +LY
Sbjct: 266 GDSVPTDLY 274
>sp|ENV_HV1ZH|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+EL
Sbjct: 77 DPNPQEL 83
>sp|ENV_HV1MP|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+EL
Sbjct: 79 DPNPQEL 85
>sp|ENV_HV1BN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+EL
Sbjct: 78 DPNPQEL 84
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEELY 10
DP P+E++
Sbjct: 77 DPNPQEVF 84
>sp|VL1_HPV68|MAJOR capsid protein L1|Human papillomavirus 68
Query: 2 GDPIPEELY 10
GD IP ++Y
Sbjct: 268 GDTIPTDMY 276
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 GDPIPEELY 10
G+ +P++LY
Sbjct: 294 GEAVPDDLY 302
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 6 PEELY 10
PEELY
Sbjct: 940 PEELY 944
>sp|VE1_HPV51|REPLICATION protein E1|Human papillomavirus 51
Query: 2 GDPIP 6
GDP+P
Sbjct: 617 GDPMP 621
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 1 EGDPIPE 7
+G+P+PE
Sbjct: 2026 DGNPVPE 2032
>sp|ENV_HV1S2|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 DPIPEEL 9
DP P+E+
Sbjct: 74 DPSPQEM 80
>sp|PG023_COWPX|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (CPV)
Query: 3 DPIPE 7
DP+PE
Sbjct: 148 DPVPE 152
>sp|PG023_MONPV|ANKYRIN repeat domain-containing protein OPG023|Monkeypox virus (MPXV)
Query: 3 DPIPE 7
DP+PE
Sbjct: 148 DPVPE 152
>sp|VL1_HPV48|MAJOR capsid protein L1|Human papillomavirus type 48
Query: 2 GDPIPEE 8
G+PIP E
Sbjct: 265 GEPIPTE 271
>sp|PG023_CWPXB|ANKYRIN repeat domain-containing protein OPG023|Cowpox virus (strain
Query: 3 DPIPE 7
DP+PE
Sbjct: 148 DPVPE 152
>sp|VL1_HPV82|MAJOR capsid protein L1|Human papillomavirus 82
Query: 2 GDPIPEELY 10
GD IP++ Y
Sbjct: 267 GDAIPDKAY 275
>sp|GLYC_GTOVV|PRE-GLYCOPROTEIN polyprotein GP complex|Guanarito mammarenavirus (isolate
Query: 1 EGDPIP 6
+GDP P
Sbjct: 445 QGDPCP 450
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 GDPIPEE 8
GD +PE+
Sbjct: 247 GDKVPED 253
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1487 EEEPIPTE 1494
>sp|VL1_HPV43|MAJOR capsid protein L1|Human papillomavirus 43
Query: 2 GDPIPEELY 10
GD +P ++Y
Sbjct: 294 GDVVPSDMY 302
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1489 EEEPIPAE 1496
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1489 EEEPIPTE 1496
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 GDPIPEELY 10
G+ +P++LY
Sbjct: 268 GEAVPDDLY 276
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 1 EGDPIPE 7
+G+P+PE
Sbjct: 2030 DGNPLPE 2036
>sp|MATRX_RABVS|MATRIX protein|Rabies virus (strain SAD B19)
Query: 2 GDPIPEEL 9
G P+PE L
Sbjct: 103 GSPVPEGL 110
>sp|UL24_HHV7J|PROTEIN UL24 homolog|Human herpesvirus 7 (strain JI)
Query: 2 GDPIPEELY 10
G+ PEEL+
Sbjct: 40 GNLFPEELH 48
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1489 EEEPIPAE 1496
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1323 EEEPIPAE 1330
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1489 EEEPIPAE 1496
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1489 EEEPIPTE 1496
>sp|PORTL_HCMVA|PORTAL protein|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DPIPE 7
DP+PE
Sbjct: 591 DPVPE 595
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 1 EGDPIPEE 8
E +PIP E
Sbjct: 1489 EEEPIPAE 1496
>sp|PORTL_HCMVM|PORTAL protein|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DPIPE 7
DP+PE
Sbjct: 591 DPVPE 595
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 2 GDPIPEEL 9
GD IP++L
Sbjct: 291 GDAIPDDL 298
>sp|POLG_USUV|GENOME polyprotein|Usutu virus (USUV)
Query: 1 EGDPIPE 7
E +P+PE
Sbjct: 1674 EEEPVPE 1680
>sp|VL1_HPV6B|MAJOR capsid protein L1|Human papillomavirus type 6b
Query: 2 GDPIPEEL 9
G+P+P+ L
Sbjct: 264 GEPVPDTL 271
>sp|VL1_HPV6A|MAJOR capsid protein L1|Human papillomavirus type 6a
Query: 2 GDPIPEEL 9
G+P+P+ L
Sbjct: 264 GEPVPDTL 271
>sp|VL1_HPV53|MAJOR capsid protein L1|Human papillomavirus type 53
Query: 2 GDPIPEELY 10
G+ IP +LY
Sbjct: 266 GEEIPNDLY 274
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 GDPIPEELY 10
G+ +P++LY
Sbjct: 268 GENVPDDLY 276
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 2 GDPIP 6
GDP+P
Sbjct: 768 GDPVP 772
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 2 GDPIP 6
GDP+P
Sbjct: 768 GDPVP 772
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 2 GDPIP 6
GDP+P
Sbjct: 768 GDPVP 772
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 500 GGPVPSE 506
>sp|HBSAG_HBVB3|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 GDPIP 6
GDP+P
Sbjct: 169 GDPVP 173
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|HBSAG_HBVB6|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 GDPIP 6
GDP+P
Sbjct: 169 GDPVP 173
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 GDPIPEE 8
G P+PE+
Sbjct: 742 GAPVPEK 748
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 GDPIPEE 8
G P+PE+
Sbjct: 742 GAPVPEK 748
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 499 GGPVPSE 505
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 GDPIPEE 8
G P+P E
Sbjct: 500 GGPVPSE 506
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 GDPIPEE 8
G P+PE+
Sbjct: 727 GAPVPEK 733
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 GDPIPE 7
G P+PE
Sbjct: 722 GGPVPE 727
>sp|TAT_HV1MV|PROTEIN Tat|Human immunodeficiency virus type 1
Query: 3 DPIPEE 8
DP+PE+
Sbjct: 66 DPVPEQ 71
>sp|HBSAG_HBVB7|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 2 GDPIP 6
GDP+P
Sbjct: 169 GDPVP 173
>sp|HBSAG_HBVB5|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 GDPIP 6
GDP+P
Sbjct: 169 GDPVP 173
>sp|US9_HHV2H|ENVELOPE protein US9|Human herpesvirus 2 (strain HG52)
Query: 4 PIPEELY 10
P+P E Y
Sbjct: 25 PVPAEAY 31
>sp|HBSAG_HBVB4|LARGE envelope protein|Hepatitis B virus genotype B/C
Query: 2 GDPIP 6
GDP+P
Sbjct: 158 GDPVP 162
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 EGDPIPEEL 9
+ DP PE L
Sbjct: 733 DADPPPENL 741
>sp|HBSAG_HBVB1|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 2 GDPIP 6
GDP+P
Sbjct: 158 GDPVP 162
>sp|HBSAG_HBVC0|LARGE envelope protein|Hepatitis B virus genotype C
Query: 2 GDPIPE 7
GDP+P+
Sbjct: 169 GDPVPK 174
>sp|HBSAG_HBVB8|LARGE envelope protein|Hepatitis B virus genotype B1
Query: 2 GDPIP 6
GDP+P
Sbjct: 169 GDPVP 173
>sp|HBSAG_HBVB2|LARGE envelope protein|Hepatitis B virus genotype B2
Query: 2 GDPIP 6
GDP+P
Sbjct: 158 GDPVP 162
6|Sequence|26|35|PEELYEMLSD
>sp|MTP_EBVB9|MAJOR tegument protein|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 2 EELYEMLSD 10
E LYE+LSD
Sbjct: 36 ERLYELLSD 44
>sp|MTP_EBVG|MAJOR tegument protein|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 2 EELYEMLSD 10
+ LYE+LSD
Sbjct: 36 QRLYELLSD 44
>sp|MTP_EBVA8|MAJOR tegument protein|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 EELYEMLSD 10
+ LYE+LSD
Sbjct: 36 QRLYELLSD 44
>sp|TEG7_HHV11|TEGUMENT protein UL51|Human herpesvirus 1 (strain 17)
Query: 1 PEELYEML 8
PEE YEM+
Sbjct: 15 PEEQYEMI 22
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 1 PEELYEM 7
PE+L+EM
Sbjct: 3139 PEDLHEM 3145
>sp|ICP4_VZVO|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain Oka
Query: 2 EELYEMLSD 10
E+LY +LSD
Sbjct: 271 EQLYHVLSD 279
>sp|ICP4_VZVD|MAJOR viral transcription factor ICP4|Varicella-zoster virus (strain
Query: 2 EELYEMLSD 10
E+LY +LSD
Sbjct: 271 EQLYHVLSD 279
>sp|RDRP_ROTGI|RNA-DIRECTED RNA polymerase|Rotavirus B (isolate RVB/Rat/United
Query: 1 PEELYEML 8
PEELY ++
Sbjct: 940 PEELYSLI 947
>sp|L_LYCVW|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain WE)
Query: 3 ELYEMLSD 10
ELYE L+D
Sbjct: 272 ELYETLTD 279
>sp|NPH2_MCV1|RNA helicase NPH-II|Molluscum contagiosum virus subtype 1
Query: 1 PEELYEMLS 9
PE L+E+ S
Sbjct: 579 PERLFELAS 587
>sp|LTP_HHV6U|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain
Query: 2 EELYEMLS 9
EE+YE+L+
Sbjct: 175 EEVYELLT 182
>sp|LTP_HHV6G|LARGE tegument protein deneddylase|Human herpesvirus 6A (strain GS)
Query: 2 EELYEMLS 9
EE+YE+L+
Sbjct: 175 EEVYELLT 182
>sp|L_LYCVA|RNA-DIRECTED RNA polymerase L|Lymphocytic choriomeningitis virus (strain
Query: 3 ELYEMLSD 10
ELYE L+D
Sbjct: 272 ELYENLAD 279
>sp|VP2_POVJC|MINOR capsid protein VP2|JC polyomavirus (JCPyV) (JCV)
Query: 1 PEELYEMLSD 10
P LY +SD
Sbjct: 208 PANLYNYISD 217
>sp|UNG_VZVD|URACIL-DNA glycosylase|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 ELYEMLSD 10
E Y++LSD
Sbjct: 90 EWYDLLSD 97
>sp|RDRP_ROTHC|RNA-DIRECTED RNA polymerase|Rotavirus C (isolate RVC/Human/United
Query: 2 EELYEMLS 9
EELYE+++
Sbjct: 947 EELYEIVN 954
>sp|UNG_VZVO|URACIL-DNA glycosylase|Varicella-zoster virus (strain Oka vaccine)
Query: 3 ELYEMLSD 10
E Y++LSD
Sbjct: 90 EWYDLLSD 97
>sp|NSP1_ROTH7|NON-STRUCTURAL protein 1|Rotavirus A (isolate RVA/Human/United
Query: 2 EELYEMLSD 10
E +YE +SD
Sbjct: 369 ESVYEYISD 377
7|Sequence|31|40|EMLSDHSIRS
>sp|U95_HHV6Z|UNCHARACTERIZED protein U95|Human herpesvirus 6B (strain Z29)
Query: 1 EMLSDHSIRS 10
E+LSD++I S
Sbjct: 20 ELLSDNAISS 29
>sp|VIF_HV2D1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 LSDHSIR 9
LS HS+R
Sbjct: 82 LSSHSVR 88
>sp|V55A_HHV7J|UNCHARACTERIZED protein U55A|Human herpesvirus 7 (strain JI)
Query: 1 EMLSDHSI 8
EM+S+H++
Sbjct: 200 EMISEHNL 207
>sp|VIF_HV2G1|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 LSDHSIR 9
LS HS+R
Sbjct: 82 LSSHSVR 88
>sp|VIF_HV2NZ|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 3 LSDHSIR 9
LS HS+R
Sbjct: 82 LSSHSVR 88
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 MLSDHSI 8
++SDHS+
Sbjct: 1765 VISDHSV 1771
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 EMLSDHSIRS 10
++LSD +RS
Sbjct: 57 DILSDRQLRS 66
8|Sequence|36|45|HSIRSFDDLQ
>sp|GLYCO_VSIVM|GLYCOPROTEIN G|Vesicular stomatitis Indiana virus (strain
Query: 1 HSIRSF 6
HSIRSF
Sbjct: 96 HSIRSF 101
>sp|GLYCO_VSIVC|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 HSIRSF 6
HSIRSF
Sbjct: 96 HSIRSF 101
>sp|MATRX_RABVB|MATRIX protein|Rabies virus (strain silver-haired bat-associated)
Query: 1 HSIRSFDDL 9
H +RSFD++
Sbjct: 74 HILRSFDEI 82
>sp|GLYCO_VSIVO|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 HSIRSF 6
HSIRSF
Sbjct: 96 HSIRSF 101
>sp|GLYCO_VSIVN|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 HSIRSF 6
HSIRSF
Sbjct: 96 HSIRSF 101
>sp|GLYCO_VSIVG|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 HSIRSF 6
HSIRSF
Sbjct: 96 HSIRSF 101
>sp|MATRX_RABVP|MATRIX protein|Rabies virus (strain Pasteur vaccins
Query: 1 HSIRSFDDL 9
H +RSFD++
Sbjct: 74 HILRSFDEI 82
>sp|MATRX_RABVH|MATRIX protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 1 HSIRSFDDL 9
H +RSFD++
Sbjct: 74 HILRSFDEI 82
>sp|MATRX_RABVN|MATRIX protein|Rabies virus (strain Nishigahara RCEH)
Query: 1 HSIRSFDDL 9
H +RSFD++
Sbjct: 74 HILRSFDEI 82
>sp|MATRX_RABVI|MATRIX protein|Rabies virus (strain India) (RABV)
Query: 1 HSIRSFDDL 9
H +RSFD++
Sbjct: 74 HILRSFDEI 82
>sp|MATRX_RABVD|MATRIX protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 HSIRSFDDL 9
H +RSFD++
Sbjct: 74 HILRSFDEI 82
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 HSIRSFD 7
H IR FD
Sbjct: 954 HEIRDFD 960
>sp|GLYCO_VSIVS|GLYCOPROTEIN stomatitis Indiana virus (strain
Query: 1 HSIRSF 6
HSI+SF
Sbjct: 96 HSIQSF 101
>sp|DPOL_ADE40|DNA polymerase|Human adenovirus F serotype 40
Query: 1 HSIRSFDDL 9
H+I FD++
Sbjct: 407 HNINGFDEI 415
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 1 HSIRSFDDLQ 10
H FDD Q
Sbjct: 120 HRFVDFDDFQ 129
>sp|DPOL_ADE07|DNA polymerase|Human adenovirus B serotype 7
Query: 1 HSIRSFDDL 9
H+I FD++
Sbjct: 341 HNINGFDEI 349
>sp|VE6_HPV28|PROTEIN E6|Human papillomavirus 28
Query: 5 SFDDLQ 10
SFDDL+
Sbjct: 19 SFDDLR 24
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 1 HSIRSFDDL 9
H+I FD++
Sbjct: 280 HNINGFDEI 288
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 2 SIRSFDDLQ 10
++ S+DD+Q
Sbjct: 1584 TLESYDDIQ 1592
>sp|DPOL_ADE04|DNA polymerase|Human adenovirus E serotype 4
Query: 1 HSIRSFDDL 9
H+I FD++
Sbjct: 411 HNINGFDEI 419
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 HSIRSFDDL 9
H+I FD++
Sbjct: 416 HNINGFDEI 424
>sp|PG148_MONPV|DNA polymerase processivity factor component|Monkeypox virus (MPXV)
Query: 4 RSFDD 8
RSFDD
Sbjct: 186 RSFDD 190
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 HSIRSFDDL 9
H+I FD++
Sbjct: 416 HNINGFDEI 424
>sp|NEP_I96A3|NUCLEAR export protein|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 HSIRSFDDL 9
H++ SF D+
Sbjct: 4 HTVSSFQDI 12
>sp|NEP_I07A0|NUCLEAR export protein|Influenza A virus (strain
Query: 1 HSIRSFDDL 9
H++ SF D+
Sbjct: 4 HTVSSFQDI 12
>sp|NEP_I00A1|NUCLEAR export protein|Influenza A virus (strain A/New
Query: 1 HSIRSFDDL 9
H++ SF D+
Sbjct: 4 HTVSSFQDI 12
9|Sequence|41|50|FDDLQRLLHG
>sp|PB2_I93A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Kitakyushu/159/1993
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I88A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/8/1988
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I83A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I80A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/4/1980
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I79A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Kiev/59/1979
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I78A8|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/18/1978
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I78A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/2/1978
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I77A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Colorado/1/1977
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I76A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/110/1976
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I75A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Victoria/3/1975
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I75A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Beijing/39/1975
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I73A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Port
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I72A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/101/1972
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I72A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/102/1972
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I72A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Udorn/307/1972
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I71A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Memphis/1/1971
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|PB2_I70A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Qu/7/1970
Query: 1 FDDLQRLLHG 10
FD ++RL HG
Sbjct: 119 FDKVERLKHG 128
>sp|L_RABVD|LARGE structural protein|Rabies virus (strain China/DRV) (RABV)
Query: 1 FDDLQRLL 8
+DD+QRLL
Sbjct: 1588 YDDIQRLL 1595
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 DDLQRLL 8
DD+QRLL
Sbjct: 1589 DDIQRLL 1595
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 DDLQRLL 8
DD+QRLL
Sbjct: 1589 DDIQRLL 1595
>sp|R1A_MERS1|REPLICASE polyprotein 1a|Middle East respiratory syndrome-related coronavirus
Query: 2 DDLQRLLH 9
DD RLLH
Sbjct: 1645 DDASRLLH 1652
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 DDLQRLLH 9
DD RLLH
Sbjct: 1645 DDASRLLH 1652
>sp|L_RABVN|LARGE structural protein|Rabies virus (strain Nishigahara RCEH)
Query: 2 DDLQRLL 8
DD+QRLL
Sbjct: 1589 DDIQRLL 1595
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 DDLQRLL 8
DD+QRLL
Sbjct: 1589 DDIQRLL 1595
>sp|PB2_I02A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Brescia/1902
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKIERLKHG 128
>sp|PB2_I000F|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Weybridge
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKIERLKHG 128
>sp|L_RABVI|LARGE structural protein|Rabies virus (strain India) (RABV)
Query: 2 DDLQRLL 8
DD+QRLL
Sbjct: 1589 DDVQRLL 1595
>sp|PB2_I97A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I97A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I96A3|POLYMERASE basic protein 2|Influenza A virus (strain A/China:Nanchang/11/1996
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I96A2|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Memphis/10/1996
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I96A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangdong/1/1996
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I85A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Victoria/1/1985
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I83A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Chile/1/1983
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I80AA|POLYMERASE basic protein 2|Influenza A virus (strain A/India/6263/1980
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I78A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Mallard/New
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I77AC|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I77AB|POLYMERASE basic protein 2|Influenza A virus (strain A/USSR/90/1977
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I77AA|POLYMERASE basic protein 2|Influenza A virus (strain A/Brazil/11/1978
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I73A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Equine/London/1416/1973
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I69A0|POLYMERASE basic protein 2|Influenza A virus (strain A/England/878/1969
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I68A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Northern
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I68A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Korea/426/1968
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I68A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I67A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1967
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I67A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Tokyo/3/1967
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I61A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Wisconsin/1/1961
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I60A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Ann
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I59A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Scotland/1959
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I57A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Singapore/1/1957
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I57A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/47/1957
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I57A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/17/1957
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I57A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Leningrad/134/1957
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I57A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Japan/305/1957
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I54A2|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I51A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Albany/12/1951
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I47A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Fort
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I45A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Huston/AA/1945
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I43A0|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Iowa/1943
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I40A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hickox/1940
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I35A3|POLYMERASE basic protein 2|Influenza A virus (strain A/USA:Phila/1935
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I33A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Wilson-Smith/1933
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I18A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Brevig
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I07A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I05A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Goose/Guangxi/345/2005
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I03A1|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I03A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I02A7|POLYMERASE basic protein 2|Influenza A virus (strain A/Teal/China/2978.1/2002
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I02A6|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I02A5|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I02A4|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 118 FEKVERLKHG 127
>sp|PB2_I02A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I02A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 113 FEKVERLKHG 122
>sp|PB2_I02A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Guinea
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 111 FEKVERLKHG 120
>sp|PB2_I01A3|POLYMERASE basic protein 2|Influenza A virus (strain A/Chicken/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I01A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Silky
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 112 FEKVERLKHG 121
>sp|PB2_I00A1|POLYMERASE basic protein 2|Influenza A virus (strain A/New
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2_I00A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Duck/Hong
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2S1_I96A0|PB2-S1 A virus (strain A/Goose/Guangdong/1/1996
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2S1_I33A0|PB2-S1 A virus (strain A/Wilson-Smith/1933
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|PB2S1_I18A0|PB2-S1 A virus (strain A/Brevig
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FEKVERLKHG 128
>sp|VE1_HPV34|REPLICATION protein E1|Human papillomavirus type 34
Query: 4 LQRLLHG 10
+Q+LLHG
Sbjct: 288 VQKLLHG 294
>sp|HELI_HHV11|DNA replication helicase|Human herpesvirus 1 (strain 17)
Query: 1 FDDLQRLLH 9
FD+ +RL H
Sbjct: 436 FDEYRRLTH 444
>sp|PB2_I82A2|POLYMERASE basic protein 2|Influenza A virus (strain A/Camel/Mongolia/1982
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 58 FERVERLKHG 67
>sp|PB2_I36A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Henry/1936
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FERVERLKHG 128
>sp|PB2_I34A1|POLYMERASE basic protein 2|Influenza A virus (strain A/Puerto
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FERVERLKHG 128
>sp|PB2_I06A0|POLYMERASE basic protein 2|Influenza A virus (strain
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FERVERLKHG 128
>sp|PB2_I000X|POLYMERASE basic protein 2|Influenza A virus (strain A/X-31
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FERVERLKHG 128
>sp|PB2S1_I34A1|PB2-S1 A virus (strain A/Puerto
Query: 1 FDDLQRLLHG 10
F+ ++RL HG
Sbjct: 119 FERVERLKHG 128
>sp|LTP_HHV8P|LARGE tegument protein deneddylase|Human herpesvirus 8 type P
Query: 1 FDDLQRL 7
FD+L+RL
Sbjct: 1670 FDNLERL 1676
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 351 DDAQKLLVG 359
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 354 DDAQKLLVG 362
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 354 DDAQKLLVG 362
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 353 DDAQKLLVG 361
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 353 DDAQKLLVG 361
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 353 DDAQKLLVG 361
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 353 DDAQKLLVG 361
>sp|POLN_EEEVF|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 351 DDAQKLLVG 359
>sp|POLN_EEEV8|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 351 DDAQKLLVG 359
>sp|POLN_EEEV1|POLYPROTEIN P1234|Eastern equine encephalitis virus (strain
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 351 DDAQKLLVG 359
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 2 DDLQRLLHG 10
DD Q+LL G
Sbjct: 351 DDAQKLLVG 359
>sp|PB2_I30A0|POLYMERASE basic protein 2|Influenza A virus (strain A/Swine/Iowa/15/1930
Query: 1 FDDLQRLLHG 10
F+ +RL HG
Sbjct: 119 FEKAERLKHG 128
>sp|NCAP_CHAVB|NUCLEOPROTEIN mammarenavirus (isolate Human/Bolivia/810419/2003)
Query: 2 DDLQRLL--HG 10
DD++RLL HG
Sbjct: 457 DDIKRLLDTHG 467
>sp|BRRF2_EBVA8|TEGUMENT protein BRRF2|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FDDLQRLLHG 10
F+D+QR G
Sbjct: 477 FEDVQREFSG 486
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 2 DDLQRLL 8
+D+QRLL
Sbjct: 1590 EDIQRLL 1596
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 2 DDLQRLL 8
+D+QRLL
Sbjct: 1589 EDIQRLL 1595
>sp|L_RABVB|LARGE structural protein|Rabies virus (strain silver-haired bat-associated)
Query: 2 DDLQRLL 8
+D+QRLL
Sbjct: 1590 EDIQRLL 1596
>sp|UL32_HHV8P|PACKAGING protein UL32 homolog|Human herpesvirus 8 type P
Query: 2 DDLQRLL 8
D+LQ+LL
Sbjct: 15 DELQKLL 21
>sp|MCP_HHV2H|MAJOR capsid protein|Human herpesvirus 2 (strain HG52)
Query: 5 QRLLHG 10
QRL HG
Sbjct: 511 QRLAHG 516
>sp|MCP_HHV11|MAJOR capsid protein|Human herpesvirus 1 (strain 17)
Query: 5 QRLLHG 10
QRL HG
Sbjct: 511 QRLAHG 516
>sp|L_DOBV|RNA-DIRECTED RNA polymerase L|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava
Query: 1 FDDLQRLLH 9
F+DL RL++
Sbjct: 1929 FNDLLRLIN 1937
>sp|L_SEOU8|RNA-DIRECTED RNA polymerase L|Seoul virus (strain 80-39)
Query: 1 FDDLQRLLH 9
F+DL RL++
Sbjct: 1929 FNDLLRLIN 1937
>sp|US29_HCMVM|UNCHARACTERIZED protein US29|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 3 DLQRLLHG 10
DL+ LHG
Sbjct: 250 DLENELHG 257
>sp|US29_HCMVA|UNCHARACTERIZED protein HHRF4|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 3 DLQRLLHG 10
DL+ LHG
Sbjct: 250 DLENELHG 257
10|Sequence|46|55|RLLHGDPGEE
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 LLHGDPG 8
LLHG+PG
Sbjct: 1211 LLHGNPG 1217
>sp|POLG_EC30B|GENOME polyprotein|Echovirus 30 (strain Bastianni)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1235 LLHGSPG 1241
>sp|POLG_EC12T|GENOME polyprotein|Echovirus 12 (strain Travis)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1234 LLHGSPG 1240
>sp|POLG_EC11G|GENOME polyprotein|Echovirus 11 (strain Gregory)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1236 LLHGSPG 1242
>sp|POLG_EC09H|GENOME polyprotein|Echovirus 9 (strain Hill)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1234 LLHGSPG 1240
>sp|POLG_EC09B|GENOME polyprotein|Echovirus 9 (strain Barty)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1244 LLHGSPG 1250
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1232 LLHGSPG 1238
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1237 LLHGSPG 1243
>sp|POLG_EC01F|GENOME polyprotein|Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1225 LLHGSPG 1231
>sp|POLG_CXB6S|GENOME polyprotein|Coxsackievirus B6 (strain Schmitt)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1225 LLHGSPG 1231
>sp|POLG_CXB5P|GENOME polyprotein|Coxsackievirus B5 (strain Peterborough /
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1226 LLHGSPG 1232
>sp|POLG_CXB4J|GENOME polyprotein|Coxsackievirus B4 (strain JVB /
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1224 LLHGSPG 1230
>sp|POLG_CXB4E|GENOME polyprotein|Coxsackievirus B4 (strain E2) (CVB4)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1224 LLHGSPG 1230
>sp|POLG_CXB3W|GENOME polyprotein|Coxsackievirus B3 (strain Woodruff)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1226 LLHGSPG 1232
>sp|POLG_CXB3N|GENOME polyprotein|Coxsackievirus B3 (strain Nancy)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1226 LLHGSPG 1232
>sp|POLG_CXB2O|GENOME polyprotein|Coxsackievirus B2 (strain Ohio-1)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1228 LLHGSPG 1234
>sp|POLG_CXB1J|GENOME polyprotein|Coxsackievirus B1 (strain Japan)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1223 LLHGSPG 1229
>sp|POLG_CXA9|GENOME polyprotein|Coxsackievirus A9 (strain Griggs)
Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 1242 LLHGSPG 1248
>sp|POLG_HRV2|GENOME polyprotein|Human rhinovirus 2 (HRV-2)
Query: 4 HGDPGEE 10
H DPG+E
Sbjct: 1547 HADPGKE 1553
Query: 2 LLHGDPG 8
++HG PG
Sbjct: 1208 VIHGPPG 1214
>sp|POLG_HRV1B|GENOME polyprotein|Human rhinovirus 1B (HRV-1B)
Query: 4 HGDPGEE 10
H DPG E
Sbjct: 1554 HADPGRE 1560
Query: 2 LLHGDPG 8
++HG PG
Sbjct: 1215 MIHGPPG 1221
>sp|POLG_HRV1A|GENOME polyprotein|Human rhinovirus 1A (HRV-1A)
Query: 4 HGDPGEE 10
H DPG E
Sbjct: 1554 HADPGRE 1560
Query: 2 LLHGDPG 8
++HG PG
Sbjct: 1215 MIHGPPG 1221
>sp|POLG_HRV16|GENOME polyprotein|Human rhinovirus 16 (HRV-16)
Query: 4 HGDPGEE 10
H DPG E
Sbjct: 1550 HADPGSE 1556
Query: 2 LLHGDPG 8
++HG PG
Sbjct: 1211 MIHGPPG 1217
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 RLLHGDP 7
RLLH DP
Sbjct: 2319 RLLHMDP 2325
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1224 LIHGSPG 1230
Query: 4 HGDPGEE 10
H DPG E
Sbjct: 1561 HSDPGSE 1567
>sp|POLG_CXA24|GENOME polyprotein|Coxsackievirus A24 (strain EH24/70)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1258 LIHGSPG 1264
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 RLLHGDP 7
RLLH DP
Sbjct: 2319 RLLHMDP 2325
>sp|POLG_POL3L|GENOME polyprotein|Poliovirus type 3 (strains P3/Leon/37
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1250 LVHGSPG 1256
>sp|POLG_POL32|GENOME polyprotein|Poliovirus type 3 (strain 23127)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1250 LVHGSPG 1256
>sp|POLG_POL2W|GENOME polyprotein|Poliovirus type 2 (strain W-2)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1251 LVHGSPG 1257
>sp|POLG_POL2L|GENOME polyprotein|Poliovirus type 2 (strain Lansing)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1251 LVHGSPG 1257
>sp|POLG_POL1S|GENOME polyprotein|Poliovirus type 1 (strain Sabin)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1253 LVHGSPG 1259
>sp|POLG_POL1M|GENOME polyprotein|Poliovirus type 1 (strain Mahoney)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1253 LVHGSPG 1259
>sp|POLG_CXA21|GENOME polyprotein|Coxsackievirus A21 (strain Coe)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1251 LVHGSPG 1257
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1225 LIHGTPG 1231
>sp|POLG_HRV14|GENOME polyprotein|Human rhinovirus 14 (HRV-14)
Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 1226 LIHGTPG 1232
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 2 LLHGDPG 8
++HG PG
Sbjct: 1239 IIHGSPG 1245
>sp|R1A_CVH22|REPLICASE polyprotein 1a|Human coronavirus 229E (HCoV-229E)
Query: 1 RLLHGDPGE 9
RL+ GD G+
Sbjct: 1746 RLMKGDKGD 1754
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 RLLHGDPGE 9
RL+ GD G+
Sbjct: 1746 RLMKGDKGD 1754
>sp|POLG_HCVTW|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 HGDPGE 9
H DPGE
Sbjct: 1905 HVDPGE 1910
>sp|REP_HCYV5|REPLICATION-ASSOCIATED protein|Human associated cyclovirus 1 (isolate
Query: 1 RLLHGDPG 8
R HG PG
Sbjct: 162 RYYHGPPG 169
>sp|PG143_VAR67|VIRION membrane protein OPG143|Variola virus (isolate
Query: 2 LLHGDP 7
L+HG+P
Sbjct: 84 LIHGEP 89
>sp|PG143_VACCC|VIRION membrane protein OPG143|Vaccinia virus (strain Copenhagen) (VACV)
Query: 2 LLHGDP 7
L+HG+P
Sbjct: 84 LIHGEP 89
>sp|PG143_MONPV|VIRION membrane protein OPG143|Monkeypox virus (MPXV)
Query: 2 LLHGDP 7
L+HG+P
Sbjct: 84 LIHGEP 89
>sp|A16_VACCT|VIRION membrane protein A16|Vaccinia virus (strain Tian Tan)
Query: 2 LLHGDP 7
L+HG+P
Sbjct: 84 LIHGEP 89
>sp|A16_VACCA|VIRION membrane protein A16|Vaccinia virus (strain Ankara) (VACV)
Query: 2 LLHGDP 7
L+HG+P
Sbjct: 84 LIHGEP 89
>sp|TERM_ADE07|PRETERMINAL protein|Human adenovirus B serotype 7
Query: 3 LHGDPGEE 10
+HG GEE
Sbjct: 162 MHGRAGEE 169
>sp|VE1_HPV11|REPLICATION protein E1|Human papillomavirus 11
Query: 4 HGDP 7
HGDP
Sbjct: 151 HGDP 154
>sp|DUT_HHV11|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 1 (strain 17)
Query: 1 RLLHGDPG 8
R+LH D G
Sbjct: 244 RMLHADAG 251
>sp|GP_TULV|ENVELOPMENT polyprotein|Tula orthohantavirus (TULV) (Tula virus)
Query: 5 GDPGE 9
GDPG+
Sbjct: 875 GDPGD 879
>sp|GP_SINV|ENVELOPMENT polyprotein|Sin Nombre orthohantavirus (SNV) (Sin
Query: 5 GDPGE 9
GDPG+
Sbjct: 874 GDPGD 878
>sp|GP_SEOUS|ENVELOPMENT polyprotein|Seoul virus (strain SR-11) (Sapporo
Query: 5 GDPGE 9
GDPG+
Sbjct: 868 GDPGD 872
>sp|GP_SEOUR|ENVELOPMENT polyprotein|Seoul virus (strain R22)
Query: 5 GDPGE 9
GDPG+
Sbjct: 869 GDPGD 873
>sp|GP_SEOU8|ENVELOPMENT polyprotein|Seoul virus (strain 80-39)
Query: 5 GDPGE 9
GDPG+
Sbjct: 868 GDPGD 872
>sp|GP_PUUMS|ENVELOPMENT polyprotein|Puumala virus (strain Sotkamo/V-2969/81)
Query: 5 GDPGE 9
GDPG+
Sbjct: 880 GDPGD 884
>sp|GP_PUUMP|ENVELOPMENT polyprotein|Puumala virus (strain P360)
Query: 5 GDPGE 9
GDPG+
Sbjct: 880 GDPGD 884
>sp|GP_PUUMK|ENVELOPMENT polyprotein|Puumala virus (strain K27)
Query: 5 GDPGE 9
GDPG+
Sbjct: 880 GDPGD 884
>sp|GP_PUUMG|ENVELOPMENT polyprotein|Puumala virus (strain Bank vole/Russia/CG1820/1984)
Query: 5 GDPGE 9
GDPG+
Sbjct: 880 GDPGD 884
>sp|GP_PUUMB|ENVELOPE glycoprotein|Puumala virus (strain Berkel)
Query: 5 GDPGE 9
GDPG+
Sbjct: 65 GDPGD 69
>sp|GP_NYV|ENVELOPMENT polyprotein|New York virus (NYV)
Query: 5 GDPGE 9
GDPG+
Sbjct: 874 GDPGD 878
>sp|GP_HANTV|ENVELOPMENT polyprotein|Hantaan virus (strain 76-118) (Korean
Query: 5 GDPGE 9
GDPG+
Sbjct: 870 GDPGD 874
>sp|GP_HANTL|ENVELOPMENT polyprotein|Hantaan virus (strain Lee) (Lee
Query: 5 GDPGE 9
GDPG+
Sbjct: 870 GDPGD 874
>sp|GP_HANTH|ENVELOPMENT polyprotein|Hantaan virus (strain Hojo) (Hojo
Query: 5 GDPGE 9
GDPG+
Sbjct: 869 GDPGD 873
>sp|GP_DOBV|ENVELOPMENT polyprotein|Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)
Query: 5 GDPGE 9
GDPG+
Sbjct: 870 GDPGD 874
>sp|GP_BCCV|ENVELOPMENT polyprotein|Black Creek Canal orthohantavirus (BCCV)
Query: 5 GDPGE 9
GDPG+
Sbjct: 876 GDPGD 880
>sp|GP_ANDV|ENVELOPMENT polyprotein|Andes orthohantavirus (ANDV) (Andes virus)
Query: 5 GDPGE 9
GDPG+
Sbjct: 873 GDPGD 877
>sp|VIF_HV2EH|VIRION infectivity factor|Human immunodeficiency virus type 2
Query: 1 RLLHG 5
RLLHG
Sbjct: 107 RLLHG 111
>sp|VGP_EBOZM|ENVELOPE glycoprotein|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 4 HGDPGEE 10
H D GEE
Sbjct: 466 HQDTGEE 472
>sp|DNBI_HHV7J|MAJOR DNA-binding protein|Human herpesvirus 7 (strain JI)
Query: 4 HGDPGEE 10
HG PG++
Sbjct: 266 HGIPGQK 272
>sp|VGP_EBOEC|ENVELOPE glycoprotein|Zaire ebolavirus (strain Eckron-76) (ZEBOV)
Query: 4 HGDPGEE 10
H D GEE
Sbjct: 466 HQDTGEE 472
>sp|LTP_HHV11|LARGE tegument protein deneddylase|Human herpesvirus 1 (strain 17)
Query: 1 RLLHGD 6
RLLH D
Sbjct: 2402 RLLHAD 2407
>sp|VGP_EBOG4|ENVELOPE glycoprotein|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 4 HGDPGEE 10
H D GEE
Sbjct: 466 HQDTGEE 472
>sp|VE1_HPV10|REPLICATION protein E1|Human papillomavirus type 10
Query: 4 HGDPGE 9
HG+P E
Sbjct: 663 HGNPSE 668
>sp|VGP_EBOZ5|ENVELOPE glycoprotein|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 4 HGDPGEE 10
H D GEE
Sbjct: 466 HQDTGEE 472
>sp|PRIM_HHV8P|DNA primase|Human herpesvirus 8 type P
Query: 2 LLHGDPG 8
LLH PG
Sbjct: 678 LLHHSPG 684
>sp|SCAF_HHV2H|CAPSID scaffolding protein|Human herpesvirus 2 (strain HG52)
Query: 5 GDPGE 9
GDPGE
Sbjct: 33 GDPGE 37
>sp|HBZ_HTL1A|HTLV-1 basic zipper factor|Human T-cell leukemia virus 1
Query: 1 RLLHGDPGEE 10
RL G PGE+
Sbjct: 60 RLRRGPPGEK 69
>sp|UNG_HCMVM|URACIL-DNA glycosylase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 LLHGDPGE 9
++HG PG
Sbjct: 154 VVHGQPGS 161
>sp|UNG_HCMVA|URACIL-DNA glycosylase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 2 LLHGDPGE 9
++HG PG
Sbjct: 154 VVHGQPGS 161
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 GDPGEE 10
G+PGE+
Sbjct: 483 GEPGED 488
>sp|NCAP_EBORE|NUCLEOPROTEIN ebolavirus (strain Philippines-96) (REBOV)
Query: 1 RLLHGDPG 8
RL+H PG
Sbjct: 515 RLIHPPPG 522
>sp|NCAP_EBORR|NUCLEOPROTEIN ebolavirus (strain Reston-89) (REBOV)
Query: 1 RLLHGDPG 8
RL+H PG
Sbjct: 515 RLIHPPPG 522
>sp|POL_HV1YB|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 5 GDPGEE 10
G+PGE+
Sbjct: 483 GEPGED 488
>sp|PAP_HHV11|DNA polymerase processivity factor|Human herpesvirus 1 (strain 17)
Query: 4 HGDP 7
HGDP
Sbjct: 359 HGDP 362
11|Sequence|51|60|DPGEEDGAEL
>sp|POLG_KOKV|GENOME polyprotein|Kokobera virus (KOKV)
Query: 3 GEEDGAEL 10
G+EDGAE+
Sbjct: 1664 GQEDGAEI 1671
>sp|VE1_HPV40|REPLICATION protein E1|Human papillomavirus 40
Query: 2 PGEEDG 7
PG+EDG
Sbjct: 625 PGDEDG 630
Query: 2 PGEEDGA 8
PG EDG
Sbjct: 5 PGTEDGG 11
>sp|L_ABLVH|LARGE structural protein|Australian bat lyssavirus (isolate Human/AUS/1998)
Query: 1 DPGEEDG 7
DPG DG
Sbjct: 1396 DPGYNDG 1402
>sp|L_ABLVB|LARGE structural protein|Australian bat lyssavirus (isolate Bat/AUS/1996)
Query: 1 DPGEEDG 7
DPG DG
Sbjct: 1397 DPGYNDG 1403
>sp|VE1_HPV48|REPLICATION protein E1|Human papillomavirus type 48
Query: 1 DPGEEDGAE 9
D G ++GAE
Sbjct: 131 DAGNQNGAE 139
>sp|CAPSD_HPBVH|CAPSID protein precursor|Human picobirnavirus (strain
Query: 2 PGEEDGAEL 10
PGE AE+
Sbjct: 405 PGEAHSAEM 413
>sp|POL_HV1YF|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 1 DPGEEDGAEL 10
DPG+E AE+
Sbjct: 917 DPGKELVAEI 926
12|Sequence|56|65|DGAELDLNMT
>sp|L_GTOVV|RNA-DIRECTED RNA polymerase L|Guanarito mammarenavirus (isolate
Query: 1 DGAELDLNMT 10
DG++ D++MT
Sbjct: 680 DGSDPDMHMT 689
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 DGAELDLNMT 10
+GA L LN+T
Sbjct: 294 EGAYLALNLT 303
>sp|NRAM_I47A0|NEURAMINIDASE A virus (strain A/Fort
Query: 1 DGAELDLNM 9
D AEL LN+
Sbjct: 459 DDAELPLNI 467
>sp|L_LASSJ|RNA-DIRECTED RNA polymerase L|Lassa virus (strain Mouse/Sierra
Query: 1 DGAELD 6
DGA+LD
Sbjct: 894 DGADLD 899
>sp|POLN_RUBVV|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVR|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RA27/3 vaccine)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVO|NON-STRUCTURAL polyprotein p200|Rubella virus (strain TO-336 vaccine)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVN|NON-STRUCTURAL polyprotein p200|Rubella virus (strain RN-UK86) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVM|NON-STRUCTURAL polyprotein p200|Rubella virus (strain M33) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVD|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Cendehill) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVC|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRDII) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|POLN_RUBVB|NON-STRUCTURAL polyprotein p200|Rubella virus (strain BRD1) (RUBV)
Query: 1 DGAELDLNMT 10
D E D+N T
Sbjct: 1876 DFTEFDMNQT 1885
Query: 1 DGAELDLNM 9
DG ++DL++
Sbjct: 1504 DGRQVDLHL 1512
>sp|VP7_ROTHO|OUTER capsid glycoprotein VP7|Rotavirus A (strain
Query: 1 DGAELDLNMT 10
DGA LN+T
Sbjct: 231 DGANHKLNVT 240
>sp|L_PI3H4|RNA-DIRECTED RNA polymerase L|Human parainfluenza 3 virus (strain
Query: 1 DGAELDLN 8
DG+ DLN
Sbjct: 144 DGSNYDLN 151
13|Sequence|61|70|DLNMTRSHSG
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 3 NMTRSHSG 10
NMT +HSG
Sbjct: 626 NMTLAHSG 633
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 3 NMTRSHSG 10
NMT +HSG
Sbjct: 626 NMTLAHSG 633
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 3 NMTRSHSG 10
NMT +HSG
Sbjct: 626 NMTLAHSG 633
>sp|CAPSD_TTVV4|CAPSID protein|Torque teno virus (isolate Human/Germany/KAV/2001)
Query: 1 DLNMTRSHS 9
DL++ R HS
Sbjct: 145 DLDLVRYHS 153
>sp|NCAP_CHAV|NUCLEOPROTEIN virus (strain I653514) (CHPV)
Query: 1 DLNMTRSH 8
DL++ RSH
Sbjct: 48 DLSLLRSH 55
>sp|ENV_HTL1N|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LNMTRSH 8
LN+T SH
Sbjct: 403 LNITNSH 409
>sp|ENV_HTL1M|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LNMTRSH 8
LN+T SH
Sbjct: 403 LNITNSH 409
>sp|ENV_HTL1L|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LNMTRSH 8
LN+T SH
Sbjct: 403 LNITNSH 409
>sp|ENV_HTL1F|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LNMTRSH 8
LN+T SH
Sbjct: 403 LNITNSH 409
>sp|ENV_HTL1C|ENVELOPE glycoprotein gp62|Human T-cell leukemia virus 1
Query: 2 LNMTRSH 8
LN+T SH
Sbjct: 403 LNITNSH 409
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 LNMTRSHS 9
+NMT +HS
Sbjct: 355 INMTFNHS 362
>sp|L_HENDH|RNA-DIRECTED RNA polymerase L|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 LNMTRSHSG 10
LNM RS+ G
Sbjct: 1989 LNMYRSYFG 1997
>sp|L_PUUMS|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Sotkamo/V-2969/81)
Query: 1 DLNMTRSH 8
D+N R H
Sbjct: 190 DINFVREH 197
>sp|L_PUUMG|RNA-DIRECTED RNA polymerase L|Puumala virus (strain Bank
Query: 1 DLNMTRSH 8
D+N R H
Sbjct: 190 DINFVREH 197
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 3 NMTRSHSG 10
N TR+H G
Sbjct: 513 NGTRTHHG 520
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 3 NMTRSHSG 10
N TR+H G
Sbjct: 513 NGTRTHHG 520
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 1 DLNMTRSH 8
++N+TR H
Sbjct: 1506 EVNLTRVH 1513
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 MTRSHSG 10
+TR+H G
Sbjct: 806 LTRNHKG 812
>sp|UL92_HHV7J|PROTEIN U63|Human herpesvirus 7 (strain JI)
Query: 1 DLNMTRSHSG 10
D N+ +H G
Sbjct: 58 DCNLINTHEG 67
14|Sequence|66|75|RSHSGGELES
>sp|ENV_HV192|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 3 HSGGELE 9
HSGG+LE
Sbjct: 360 HSGGDLE 366
>sp|CAPSP_ADE05|PENTON protein|Human adenovirus C serotype 5
Query: 1 RSHSGGELES 10
RSH GG+L++
Sbjct: 116 RSHWGGDLKT 125
>sp|CAPSP_ADE02|PENTON protein|Human adenovirus C serotype 2
Query: 1 RSHSGGELES 10
RSH GG+L++
Sbjct: 116 RSHWGGDLKT 125
>sp|ENV_HV193|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SHSGGELE 9
S SGG+LE
Sbjct: 363 SSSGGDLE 370
>sp|POLG_MVEV5|GENOME polyprotein|Murray valley encephalitis virus (strain
Query: 1 RSHSGGEL 8
R HSG E+
Sbjct: 1753 REHSGNEI 1760
>sp|POLG_WNV|GENOME polyprotein|West Nile virus (WNV)
Query: 1 RSHSGGEL 8
R HSG E+
Sbjct: 1751 REHSGNEI 1758
>sp|ENV_HV1LW|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RSHSGGELE 9
+ SGG+LE
Sbjct: 362 KQSSGGDLE 370
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 3 HSGGELE 9
HS GE+E
Sbjct: 1816 HSNGEIE 1822
>sp|ENV_HV1ET|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 1 RSHSGGELE 9
+ SGG+LE
Sbjct: 357 KPSSGGDLE 365
>sp|ENV_HV19N|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 SHSGGELE 9
S +GG+LE
Sbjct: 359 SSAGGDLE 366
>sp|POLG_BUSV|GENOME polyprotein|Bussuquara virus (BUSV)
Query: 2 SHSGGEL 8
SHSG E+
Sbjct: 1754 SHSGNEI 1760
>sp|ENV_HV1VI|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 SGGELE 9
SGG+LE
Sbjct: 355 SGGDLE 360
>sp|ENV_HV1AN|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 4 SGGELE 9
SGG+LE
Sbjct: 363 SGGDLE 368
>sp|POLG_HCVIN|GENOME polyprotein|Hepatitis C virus genotype 1c
Query: 5 GGELES 10
GGEL+S
Sbjct: 2375 GGELDS 2380
>sp|POL_HV1OY|GAG-POL polyprotein|Human immunodeficiency virus type 1
Query: 4 SGGELE 9
SGGEL+
Sbjct: 9 SGGELD 14
15|Sequence|71|80|GELESLARGR
>sp|L_HANTV|RNA-DIRECTED RNA polymerase L|Hantaan virus (strain 76-118) (Korean
Query: 2 ELESLARG 9
ELES+ RG
Sbjct: 2086 ELESIVRG 2093
>sp|PG079_MONPV|PROTEIN OPG079|Monkeypox virus (MPXV)
Query: 1 GELESLAR 8
GELESL++
Sbjct: 175 GELESLSK 182
>sp|PG079_VARV|PROTEIN OPG079|Variola virus
Query: 1 GELESLAR 8
GELESL++
Sbjct: 175 GELESLSK 182
>sp|PG079_VAR67|PROTEIN OPG079|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 GELESLAR 8
GELESL++
Sbjct: 175 GELESLSK 182
>sp|PG079_VACCC|PROTEIN OPG079|Vaccinia virus (strain Copenhagen) (VACV)
Query: 1 GELESLAR 8
GELESL++
Sbjct: 175 GELESLSK 182
>sp|NSS_SFTSV|NON-STRUCTURAL protein NS-S|SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010)
Query: 2 ELESLARGR 10
++ESLAR R
Sbjct: 187 QIESLARLR 195
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 GELESLA 7
GE+ESL+
Sbjct: 1818 GEIESLS 1824
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 GELESLA 7
GE+ESL+
Sbjct: 1818 GEIESLS 1824
16|Sequence|76|85|LARGRRSLGS
>sp|PG057_VAR67|ENVELOPE phospholipase OPG057|Variola virus (isolate
Query: 3 RGRRSLG 9
RG+R+LG
Sbjct: 86 RGKRNLG 92
>sp|PG057_VACCP|ENVELOPE phospholipase OPG057|Vaccinia virus (strain L-IVP) (VACV)
Query: 3 RGRRSLG 9
RG+R+LG
Sbjct: 86 RGKRNLG 92
>sp|PG057_VACCI|ENVELOPE phospholipase OPG057|Vaccinia virus (strain IHD-J) (VACV)
Query: 3 RGRRSLG 9
RG+R+LG
Sbjct: 86 RGKRNLG 92
>sp|PG057_VACCC|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Copenhagen) (VACV)
Query: 3 RGRRSLG 9
RG+R+LG
Sbjct: 86 RGKRNLG 92
>sp|PG057_VACCA|ENVELOPE phospholipase OPG057|Vaccinia virus (strain Ankara) (VACV)
Query: 3 RGRRSLG 9
RG+R+LG
Sbjct: 86 RGKRNLG 92
>sp|PG057_MONPV|ENVELOPE phospholipase OPG057|Monkeypox virus (MPXV)
Query: 3 RGRRSLG 9
RG+R+LG
Sbjct: 86 RGKRNLG 92
>sp|POLG_OHFV|GENOME polyprotein|Omsk hemorrhagic fever virus (OHFV)
Query: 2 ARGRRSLGS 10
A GRRSLG
Sbjct: 2106 ASGRRSLGD 2114
>sp|VL1_HPV42|MAJOR capsid protein L1|Human papillomavirus 42
Query: 2 ARGRRSLGS 10
A GR +LGS
Sbjct: 280 ASGRHNLGS 288
>sp|POLG_HKV1|GENOME polyprotein|Human klassevirus 1 (HKV-1)
Query: 4 GRRSLGS 10
GRR LGS
Sbjct: 2081 GRRLLGS 2087
>sp|POLG_SALVA|GENOME polyprotein|Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A)
Query: 4 GRRSLGS 10
GRR LGS
Sbjct: 2085 GRRLLGS 2091
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 LARGRRSL 8
A GRRSL
Sbjct: 2084 FAEGRRSL 2091
>sp|POLG_LANVT|GENOME polyprotein|Langat virus (strain TP21)
Query: 2 ARGRRSLGS 10
A GRRS+G
Sbjct: 2106 ASGRRSVGD 2114
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 2 ARGRRSLGS 10
A GRRS+G
Sbjct: 2108 ASGRRSVGD 2116
>sp|POLG_KFDV|GENOME polyprotein|Kyasanur forest disease virus (KFDV)
Query: 2 ARGRRSLGS 10
A GRRS+G
Sbjct: 2108 ASGRRSVGD 2116
>sp|POLG_POWVL|GENOME polyprotein|Tick-borne powassan virus (strain LB)
Query: 3 RGRRSL 8
RGRRSL
Sbjct: 1355 RGRRSL 1360
>sp|SODL_CWPXB|CU-ZN superoxide dismutase-like protein OPG175|Cowpox virus (strain
Query: 1 LARGRRSLGS 10
++RG S+GS
Sbjct: 48 ISRGCESIGS 57
>sp|GAG_SFV1|GAG polyprotein|Simian foamy virus type 1
Query: 2 ARGRRS 7
ARGRRS
Sbjct: 484 ARGRRS 489
>sp|SODL_VARV|CU-ZN superoxide dismutase-like protein OPG175|Variola virus
Query: 1 LARGRRSLGS 10
++RG S+GS
Sbjct: 48 ISRGCNSIGS 57
>sp|SODL_VAR67|CU-ZN superoxide dismutase-like protein OPG175|Variola virus (isolate
Query: 1 LARGRRSLGS 10
++RG S+GS
Sbjct: 48 ISRGCNSIGS 57
17|Sequence|81|90|RSLGSLTIAE
>sp|MATRX_PI1HC|MATRIX protein|Human parainfluenza 1 virus (strain
Query: 2 SLGSLTIAE 10
SLG++TIA+
Sbjct: 176 SLGTITIAK 184
>sp|MATRX_PI1HA|MATRIX protein|Human parainfluenza 1 virus (strains
Query: 2 SLGSLTIAE 10
SLG++TIA+
Sbjct: 176 SLGTITIAK 184
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 RSLGSLTIAE 10
RSLGSL + +
Sbjct: 124 RSLGSLFLEQ 133
>sp|PAP1_ORFN2|POLY(A) polymerase catalytic subunit|Orf virus (strain NZ2) (OV
Query: 1 RSLGSLT 7
R+LGSLT
Sbjct: 98 RTLGSLT 104
>sp|POLN_RUBVT|NON-STRUCTURAL polyprotein p200|Rubella virus (strain Therien) (RUBV)
Query: 1 RSLGSLTIAE 10
R LGS+ +AE
Sbjct: 431 RFLGSVPLAE 440
>sp|CEP2_HHV7J|CYTOPLASMIC envelopment protein 2|Human herpesvirus 7 (strain JI)
Query: 3 LGSLTIAE 10
LGSLT+ +
Sbjct: 103 LGSLTVTD 110
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 SLGSLTI 8
S+GSLT+
Sbjct: 67 SMGSLTV 73
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 3 LGSLTI 8
LGSLTI
Sbjct: 1952 LGSLTI 1957
>sp|U79_HHV6H|PROTEIN U79/U80|Human herpesvirus 6B (HHV-6 variant
Query: 2 SLGSLTI 8
S+GSLT+
Sbjct: 67 SMGSLTV 73
>sp|U79_HHV6Z|PROTEIN U79|Human herpesvirus 6B (strain Z29)
Query: 2 SLGSLTI 8
S+GSLT+
Sbjct: 67 SMGSLTV 73
18|Sequence|86|95|LTIAEPAMIA
>sp|RDRP_DHVI1|RNA-DIRECTED RNA polymerase catalytic subunit|Dhori virus (strain
Query: 2 TIAEPAMIA 10
TIA P+M+A
Sbjct: 243 TIATPSMLA 251
19|Sequence|91|100|PAMIAECKTR
>sp|POLG_HAVMB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|POLG_HAVLA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|POLG_HAVHM|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|POLG_HAVHA|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 977 GLIAECRT 984
>sp|POLG_HAVH2|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|POLG_HAVGB|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|POLG_HAVCF|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|POLG_HAV88|GENOME polyprotein|Human hepatitis A virus genotype
Query: 2 AMIAECKT 9
+IAEC+T
Sbjct: 983 GLIAECRT 990
>sp|NSS_TOSV|NON-STRUCTURAL protein NS-S|Toscana virus (Tos)
Query: 1 PAMIAECKTR 10
P MI+ +TR
Sbjct: 77 PGMISAVRTR 86
>sp|VE1_HPV39|REPLICATION protein E1|Human papillomavirus 39
Query: 2 AMIAECKT 9
AM+A+C +
Sbjct: 377 AMLADCNS 384
20|Sequence|96|105|ECKTRTEVFE
>sp|DPOL_HHV6Z|DNA polymerase catalytic subunit|Human herpesvirus 6B (strain Z29)
Query: 2 CKTRTEVFE 10
CK R E+F+
Sbjct: 869 CKAREELFQ 877
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 1 ECKTRTEVFE 10
EC +RT + E
Sbjct: 1714 ECASRTALIE 1723
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 1 ECKTRTEVFE 10
+C+ RTE+ E
Sbjct: 1343 KCQDRTELLE 1352
>sp|POLG_HRV8A|GENOME polyprotein|Human rhinovirus A serotype 89
Query: 1 ECKTRTEVF 9
+ KTR +VF
Sbjct: 853 QIKTRPDVF 861
>sp|US23_HCMVM|PROTEIN US23|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 2 CKTRTEVF 9
C TR E F
Sbjct: 22 CHTRYETF 29
21|Sequence|101|110|TEVFEISRRL
>sp|VE1_HPV41|REPLICATION protein E1|Human papillomavirus type 41
Query: 1 TEVFEISR 8
T+ FE+SR
Sbjct: 316 TDTFELSR 323
>sp|VE1_HPV04|REPLICATION protein E1|Human papillomavirus 4
Query: 2 EVFEISR 8
E FE+SR
Sbjct: 304 ETFELSR 310
>sp|VP4_ROTHN|OUTER capsid protein VP4|Rotavirus A (isolate
Query: 2 EVFEISRRL 10
E +EI+RR
Sbjct: 460 EYYEIARRF 468
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 2 EVFEISRRL 10
E+ E+SRR+
Sbjct: 1846 EIEELSRRV 1854
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 2 EVFEISRRL 10
E+ E+SRR+
Sbjct: 1844 EIDELSRRV 1852
>sp|PHOSP_PI1HE|PHOSPHOPROTEIN parainfluenza 1 virus (strain
Query: 4 FEISRR 9
FE+SRR
Sbjct: 344 FELSRR 349
>sp|RDRP_CTFVL|RNA-DIRECTED RNA polymerase VP1|Colorado tick fever virus (strain
Query: 1 TEVFEISRR 9
T +F++SRR
Sbjct: 1373 TFLFDVSRR 1381
22|Sequence|106|115|ISRRLIDRTN
>sp|GP_UUKS|ENVELOPMENT polyprotein|Uukuniemi virus (strain S23) (UUKV)
Query: 1 ISRRLIDRTN 10
++RRL+D +N
Sbjct: 25 VTRRLLDSSN 34
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 1 ISRRLIDRT 9
+SRR+I RT
Sbjct: 220 LSRRMIQRT 228
>sp|HEMA_I80A2|HEMAGGLUTININ A virus (strain A/Seal/Massachusetts/1/1980
Query: 4 RLIDRTN 10
RLID+TN
Sbjct: 393 RLIDKTN 399
>sp|VE1_HPV44|REPLICATION protein E1|Human papillomavirus 44
Query: 1 ISRRLIDR 8
+ RRL DR
Sbjct: 120 VKRRLFDR 127
>sp|HEMA_I56A3|HEMAGGLUTININ A virus (strain A/Equine/Prague/1/1956
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I86A1|HEMAGGLUTININ A virus (strain A/Memphis/6/1986
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 383 RLIEKTN 389
>sp|HEMA_I63A0|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1963
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I83A8|HEMAGGLUTININ A virus (strain A/Hong
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 399 RLIEKTN 405
>sp|HEMA_I000F|HEMAGGLUTININ A virus (strain A/Chicken/Weybridge
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 396 RLIEKTN 402
>sp|HEMA_I85A6|HEMAGGLUTININ A virus (strain A/Starling/Victoria/5156/1985
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 396 RLIEKTN 402
>sp|HEMA_I85A3|HEMAGGLUTININ A virus (strain A/Chicken/Victoria/1/1985
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 396 RLIEKTN 402
>sp|HEMA_I77A9|HEMAGGLUTININ A virus (strain A/Equine/New
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I72A7|HEMAGGLUTININ A virus (strain A/Equine/Switzerland/137/1972
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I73A4|HEMAGGLUTININ A virus (strain A/Equine/London/1416/1973
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I73A1|HEMAGGLUTININ A virus (strain A/Equine/Cambridge/1/1973
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I64A6|HEMAGGLUTININ A virus (strain A/Equine/Detroit/1/1964
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I64A5|HEMAGGLUTININ A virus (strain A/Equine/C.Detroit/1/1964
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I76AL|HEMAGGLUTININ A virus (strain A/Equine/Sao
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I66A2|HEMAGGLUTININ A virus (strain A/Equine/Lexington/1/1966
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 403 RLIEKTN 409
>sp|HEMA_I89A2|HEMAGGLUTININ A virus (strain A/Beijing/353/1989
Query: 4 RLIDRTN 10
RLI++TN
Sbjct: 399 RLIEKTN 405
23|Sequence|111|120|IDRTNANFLV
>sp|POLG_EC05N|GENOME polyprotein|Echovirus 5 (strain Noyce)
Query: 1 IDRTNANFL 9
+++TN NF+
Sbjct: 830 VNKTNVNFI 838
>sp|VP24_EBORR|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 1 IDRTNANFLV 10
I RTN FLV
Sbjct: 190 ITRTNMGFLV 199
>sp|VP24_EBORE|MEMBRANE-ASSOCIATED protein VP24|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 1 IDRTNANFLV 10
I RTN FLV
Sbjct: 190 ITRTNMGFLV 199
>sp|VP24_EBOG4|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Gabon-94) (ZEBOV)
Query: 1 IDRTNANFLV 10
I RTN FLV
Sbjct: 190 ITRTNMGFLV 199
>sp|VP24_EBOZM|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 1 IDRTNANFLV 10
I RTN FLV
Sbjct: 190 ITRTNMGFLV 199
>sp|VP24_EBOZ5|MEMBRANE-ASSOCIATED protein VP24|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 1 IDRTNANFLV 10
I RTN FLV
Sbjct: 190 ITRTNMGFLV 199
>sp|US9_CHV1|ENVELOPE protein US9 homolog|Cercopithecine herpesvirus 1 (CeHV-1) (Simian
Query: 2 DRTNANFLV 10
D T A+FLV
Sbjct: 37 DETAADFLV 45
>sp|NCAP_CVHN5|NUCLEOPROTEIN coronavirus HKU1 (isolate N5)
Query: 1 IDRTNANF 8
+ R+N+NF
Sbjct: 213 LSRSNSNF 220
>sp|NCAP_CVHN2|NUCLEOPROTEIN coronavirus HKU1 (isolate N2)
Query: 1 IDRTNANF 8
+ R+N+NF
Sbjct: 213 LSRSNSNF 220
>sp|NCAP_CVHN1|NUCLEOPROTEIN coronavirus HKU1 (isolate N1)
Query: 1 IDRTNANF 8
+ R+N+NF
Sbjct: 213 LSRSNSNF 220
>sp|VP24_EBOSU|MEMBRANE-ASSOCIATED protein VP24|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 1 IDRTNANFLV 10
I RTN +LV
Sbjct: 190 ITRTNMGYLV 199
>sp|VP24_MABVP|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Popp-67)
Query: 1 IDRTNANFLV 10
I R N FLV
Sbjct: 190 ITRVNMGFLV 199
>sp|VP24_MABVR|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ravn-87)
Query: 1 IDRTNANFLV 10
I R N FLV
Sbjct: 190 ITRVNMGFLV 199
>sp|VP24_MABVO|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Ozolin-75)
Query: 1 IDRTNANFLV 10
I R N FLV
Sbjct: 190 ITRVNMGFLV 199
>sp|VP24_MABVA|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Angola/2005)
Query: 1 IDRTNANFLV 10
I R N FLV
Sbjct: 190 ITRVNMGFLV 199
>sp|VP24_MABVM|MEMBRANE-ASSOCIATED protein VP24|Lake Victoria marburgvirus (strain Musoke-80)
Query: 1 IDRTNANFLV 10
I R N FLV
Sbjct: 190 ITRVNMGFLV 199
>sp|ENV_HV197|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 1
Query: 2 DRTNAN 7
+RTNAN
Sbjct: 136 NRTNAN 141
24|Sequence|116|125|ANFLVWPPCV
>sp|GLRX2_VARV|GLUTAREDOXIN-2 virus
Query: 1 ANFLVWPP 8
AN+ VWPP
Sbjct: 114 ANYGVWPP 121
>sp|GLRX2_VAR67|GLUTAREDOXIN-2 virus (isolate Human/India/Ind3/1967) (VARV)
Query: 1 ANFLVWPP 8
AN+ VWPP
Sbjct: 114 ANYGVWPP 121
>sp|GLRX2_VACCT|GLUTAREDOXIN-2 virus (strain Tian Tan)
Query: 1 ANFLVWPP 8
AN+ VWPP
Sbjct: 114 ANYGVWPP 121
>sp|GLRX2_VACCA|GLUTAREDOXIN-2 virus (strain Ankara) (VACV)
Query: 1 ANFLVWPP 8
AN+ VWPP
Sbjct: 114 ANYGVWPP 121
>sp|GLRX2_CWPXG|GLUTAREDOXIN-2 virus (strain GRI-90 /
Query: 1 ANFLVWPP 8
AN+ VWPP
Sbjct: 114 ANYGVWPP 121
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 ANFLVWPPCV 10
A L+WP C+
Sbjct: 86 AAVLIWPSCI 95
>sp|GAG_HV1MN|GAG polyprotein|Human immunodeficiency virus type 1
Query: 1 ANFL--VWPPC 9
ANFL +WP C
Sbjct: 434 ANFLGKIWPSC 444
>sp|PORTL_VZVD|PORTAL protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 3 FLVWPPCV 10
+VWPP V
Sbjct: 295 LVVWPPVV 302
>sp|GLRX2_VACCC|GLUTAREDOXIN-2 virus (strain Copenhagen) (VACV)
Query: 1 ANFLVWPP 8
A + VWPP
Sbjct: 114 ATYGVWPP 121
>sp|GLRX2_MONPV|GLUTAREDOXIN-2 virus (MPXV)
Query: 1 ANFLVWPP 8
A + VWPP
Sbjct: 114 ATYGVWPP 121
>sp|GLRX2_CWPXB|GLUTAREDOXIN-2 virus (strain Brighton Red)
Query: 1 ANFLVWPP 8
A + VWPP
Sbjct: 114 ATYGVWPP 121
>sp|PAP_HHV2H|DNA polymerase processivity factor|Human herpesvirus 2 (strain HG52)
Query: 6 WPPC 9
WPPC
Sbjct: 28 WPPC 31
>sp|POL_XMRV4|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 6 WPPCV 10
WPPC+
Sbjct: 1063 WPPCL 1067
>sp|POL_XMRV6|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 6 WPPCV 10
WPPC+
Sbjct: 1063 WPPCL 1067
>sp|POL_XMRV3|GAG-POL polyprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 6 WPPCV 10
WPPC+
Sbjct: 1063 WPPCL 1067
>sp|GB_HHV1P|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain Patton)
Query: 1 ANFLVWPP 8
ANF V PP
Sbjct: 111 ANFYVCPP 118
>sp|GB_HHV1K|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain KOS)
Query: 1 ANFLVWPP 8
ANF V PP
Sbjct: 111 ANFYVCPP 118
>sp|GB_HHV1F|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain F)
Query: 1 ANFLVWPP 8
ANF V PP
Sbjct: 110 ANFYVCPP 117
>sp|GB_HHV11|ENVELOPE glycoprotein B|Human herpesvirus 1 (strain 17)
Query: 1 ANFLVWPP 8
ANF V PP
Sbjct: 111 ANFYVCPP 118
>sp|DR6_HHV6U|G2/M cell-cycle inhibitor DR6|Human herpesvirus 6A (strain
Query: 4 LVWPPC 9
L WPPC
Sbjct: 58 LPWPPC 63
>sp|VP22_HCMVM|TEGUMENT protein UL24|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LVWPP 8
+VWPP
Sbjct: 90 VVWPP 94
>sp|VP22_HCMVA|PROTEIN UL24|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LVWPP 8
+VWPP
Sbjct: 90 VVWPP 94
>sp|L_PIV5W|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain 21004-WR)
Query: 5 VWPP 8
VWPP
Sbjct: 417 VWPP 420
>sp|L_PIV5|RNA-DIRECTED RNA polymerase L|Parainfluenza virus 5 (strain W3)
Query: 5 VWPP 8
VWPP
Sbjct: 417 VWPP 420
>sp|VP4_ROTGI|OUTER capsid protein VP4|Rotavirus B (isolate RVB/Rat/United
Query: 5 VWPPC 9
VW PC
Sbjct: 196 VWGPC 200
>sp|VU5_HHV7J|PROTEIN U5|Human herpesvirus 7 (strain JI)
Query: 4 LVWPP 8
L WPP
Sbjct: 12 LAWPP 16
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 VWPP 8
VWPP
Sbjct: 830 VWPP 833
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 5 VWPP 8
VWPP
Sbjct: 830 VWPP 833
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 VWPP 8
VWPP
Sbjct: 830 VWPP 833
>sp|DUT_HHV7J|DEOXYURIDINE 5'-triphosphate nucleotidohydrolase|Human herpesvirus 7 (strain JI)
Query: 4 LVWPPC 9
L+W PC
Sbjct: 166 LIWVPC 171
>sp|UL298_HCMVA|PROTEIN UL29/UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LVWPP 8
L WPP
Sbjct: 421 LCWPP 425
>sp|L_HMPVC|RNA-DIRECTED RNA polymerase L|Human metapneumovirus (strain CAN97-83) (HMPV)
Query: 1 ANFLVW 6
ANF +W
Sbjct: 219 ANFCIW 224
>sp|PORTL_HHV11|PORTAL protein|Human herpesvirus 1 (strain 17)
Query: 3 FLVWPP 8
++WPP
Sbjct: 255 LVLWPP 260
>sp|UL298_HCMVM|PROTEIN UL29/28|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 LVWPP 8
L WPP
Sbjct: 420 LCWPP 424
>sp|GB_HHV8P|ENVELOPE glycoprotein B|Human herpesvirus 8 type P
Query: 3 FLVWPP 8
+LVW P
Sbjct: 398 YLVWQP 403
>sp|VL1_HPV27|MAJOR capsid protein L1|Human papillomavirus 27
Query: 3 FLVWPP 8
FLVW P
Sbjct: 64 FLVWGP 69
>sp|UL28_HCMVA|UNCHARACTERIZED protein UL28|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 LVWPP 8
L WPP
Sbjct: 99 LCWPP 103
>sp|VU7_HHV6Z|PROTEIN U7|Human herpesvirus 6B (strain Z29)
Query: 4 LVWPP 8
+ WPP
Sbjct: 76 IAWPP 80
>sp|U7_HHV6U|PROTEIN U7|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 LVWPP 8
+ WPP
Sbjct: 399 IAWPP 403
>sp|GO_HHV7J|GLYCOPROTEIN U47 homolog|Human herpesvirus 7 (strain JI)
Query: 2 NFLVWP 7
NF +WP
Sbjct: 43 NFSMWP 48
>sp|HEPA_EBVB9|DNA helicase/primase complex-associated protein|Epstein-Barr virus
Query: 5 VWPP 8
+WPP
Sbjct: 368 IWPP 371
>sp|DPOL_ADE12|DNA polymerase|Human adenovirus A serotype 12
Query: 2 NFLVW 6
NFL+W
Sbjct: 337 NFLLW 341
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 ANFLVW 6
AN+L W
Sbjct: 7022 ANYLFW 7027
Query: 2 NFLVW 6
NFL W
Sbjct: 3449 NFLAW 3453
>sp|R1AB_CVHN1|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N1)
Query: 1 ANFLVW 6
AN+L W
Sbjct: 7109 ANYLFW 7114
>sp|R1AB_CVHN2|REPLICASE polyprotein 1ab|Human coronavirus HKU1 (isolate N2)
Query: 1 ANFLVW 6
AN+L W
Sbjct: 7079 ANYLFW 7084
25|Sequence|121|130|WPPCVEVQRC
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 2 PPCVEVQRC 10
PPCV + RC
Sbjct: 59 PPCVTLMRC 67
>sp|B17_VARV|PROTEIN B17|Variola virus
Query: 4 CVEVQRC 10
CV V+RC
Sbjct: 52 CVNVRRC 58
>sp|B17_VAR67|PROTEIN B17|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CVEVQRC 10
CV V+RC
Sbjct: 52 CVNVRRC 58
>sp|B17_VACCC|PROTEIN B17|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CVEVQRC 10
CV V+RC
Sbjct: 52 CVNVRRC 58
>sp|DPOL_HBVA6|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 WPPCVE 6
W PCVE
Sbjct: 344 WGPCVE 349
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 2 PPCVEVQRC 10
P CV V+RC
Sbjct: 69 PRCVTVKRC 77
>sp|DPOL_HBVC9|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC+E
Sbjct: 349 WGPCIE 354
>sp|HEPA_HHV6Z|DNA helicase/primase complex-associated protein|Human herpesvirus 6B
Query: 4 CVEVQRC 10
C+E+ RC
Sbjct: 496 CMEISRC 502
>sp|U79_HHV6U|PROTEIN U79/U80|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 PPCVEV 7
PPC+ +
Sbjct: 253 PPCISI 258
>sp|L_PI2HT|RNA-DIRECTED RNA polymerase L|Human parainfluenza 2 virus (strain
Query: 1 WPPCV 5
WP C+
Sbjct: 91 WPSCI 95
>sp|PG200_VARV|PROTEIN OPG200|Variola virus
Query: 4 CVEVQRC 10
CVE+ RC
Sbjct: 83 CVEIIRC 89
>sp|PG200_VAR67|PROTEIN OPG200|Variola virus (isolate Human/India/Ind3/1967) (VARV)
Query: 4 CVEVQRC 10
CVE+ RC
Sbjct: 83 CVEIIRC 89
>sp|HEPA_HHV6U|DNA helicase/primase complex-associated protein|Human herpesvirus 6A
Query: 4 CVEVQRC 10
C E+ RC
Sbjct: 496 CAEISRC 502
>sp|PRIM_HHV6Z|DNA primase|Human herpesvirus 6B (strain Z29)
Query: 4 CVEVQRC 10
C++ Q+C
Sbjct: 45 CLQTQKC 51
>sp|PRIM_HHV6U|DNA primase|Human herpesvirus 6A (strain Uganda-1102)
Query: 4 CVEVQRC 10
C++ Q+C
Sbjct: 45 CLQTQKC 51
>sp|GP_PTPV|ENVELOPMENT polyprotein|Punta toro phlebovirus
Query: 2 PPCVEVQRC 10
P C+ +RC
Sbjct: 888 PSCLSSRRC 896
>sp|PRIM_HHV7J|DNA primase|Human herpesvirus 7 (strain JI)
Query: 4 CVEVQRC 10
C++ Q+C
Sbjct: 45 CMQTQKC 51
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 WPPCVEVQ 8
WP +VQ
Sbjct: 431 WPTAAQVQ 438
>sp|L_VSIVS|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 WPPCVEVQ 8
WP +VQ
Sbjct: 431 WPTAAQVQ 438
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 WPPCVEVQ 8
WP +VQ
Sbjct: 431 WPTAAQVQ 438
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 1 WPPCVEVQ 8
WP +VQ
Sbjct: 431 WPTAAQVQ 438
>sp|DPOL_HBVE2|PROTEIN P|Hepatitis B virus genotype E
Query: 1 WPPCVEVQR 9
W PC E R
Sbjct: 348 WGPCTEHGR 356
>sp|DPOL_HBVE4|PROTEIN P|Hepatitis B virus genotype E
Query: 1 WPPCVEVQR 9
W PC E R
Sbjct: 348 WGPCTEHGR 356
>sp|DPOL_HBVC0|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVC4|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|GLYC_MACHU|PRE-GLYCOPROTEIN polyprotein GP complex|Machupo virus (MACV)
Query: 3 PCVEVQRC 10
PC E ++C
Sbjct: 206 PCEEGKKC 213
>sp|DPOL_HBVC5|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVD1|PROTEIN P|Hepatitis B virus genotype D
Query: 1 WPPCVE 6
W PC E
Sbjct: 338 WGPCAE 343
>sp|DPOL_HBVC7|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVE3|PROTEIN P|Hepatitis B virus genotype E
Query: 1 WPPCVE 6
W PC E
Sbjct: 348 WGPCTE 353
>sp|DPOL_HBVE1|PROTEIN P|Hepatitis B virus genotype E
Query: 1 WPPCVE 6
W PC E
Sbjct: 348 WGPCTE 353
>sp|DPOL_HBVC2|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|L_JUNIN|RNA-DIRECTED RNA polymerase L|Junin mammarenavirus (JUNV) (Junn mammarenavirus)
Query: 3 PCVEVQRC 10
PC+ ++C
Sbjct: 1337 PCLSDEKC 1344
>sp|DPOL_HBVCJ|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVC3|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVC1|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVD4|PROTEIN P|Hepatitis B virus genotype D
Query: 1 WPPCVE 6
W PC E
Sbjct: 338 WGPCTE 343
>sp|DPOL_HBVC8|PROTEIN P|Hepatitis B virus genotype C
Query: 1 WPPCVE 6
W PC E
Sbjct: 344 WGPCTE 349
>sp|GP_RVFVZ|ENVELOPMENT polyprotein|Rift valley fever virus (strain
Query: 2 PPCVEVQRC 10
P C+ +RC
Sbjct: 769 PKCLSSRRC 777
>sp|DPOL_HBVD7|PROTEIN P|Hepatitis B virus genotype D
Query: 1 WPPCVE 6
W PC E
Sbjct: 338 WGPCAE 343
>sp|DPOL_HBVD3|PROTEIN P|Hepatitis B virus genotype D
Query: 1 WPPCVE 6
W PC E
Sbjct: 338 WGPCAE 343
>sp|DPOL_HBVB2|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCAE 354
>sp|DPOL_HBVD5|PROTEIN P|Hepatitis B virus genotype D
Query: 1 WPPCVE 6
W PC E
Sbjct: 338 WGPCAE 343
>sp|DPOL_HBVA5|PROTEIN P|Hepatitis B virus genotype A1
Query: 1 WPPCVE 6
W PC E
Sbjct: 351 WGPCTE 356
>sp|DPOL_HBVD2|PROTEIN P|Hepatitis B virus genotype D
Query: 1 WPPCVE 6
W PC E
Sbjct: 338 WGPCAE 343
>sp|GP_RVFV|ENVELOPMENT polyprotein|Rift valley fever virus (RVFV)
Query: 2 PPCVEVQRC 10
P C+ +RC
Sbjct: 769 PKCLSSRRC 777
>sp|DPOL_HBVG2|PROTEIN P|Hepatitis B virus genotype G
Query: 1 WPPCVE 6
W PC E
Sbjct: 348 WGPCTE 353
>sp|DPOL_HBVB5|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVG3|PROTEIN P|Hepatitis B virus genotype G
Query: 1 WPPCVE 6
W PC E
Sbjct: 348 WGPCTE 353
>sp|DPOL_HBVB6|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|PRIM_HCMVM|DNA primase|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 4 CVEVQRC 10
C++ Q+C
Sbjct: 45 CLQTQKC 51
>sp|DPOL_HBVB4|PROTEIN P|Hepatitis B virus genotype B/C
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVB1|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCAE 354
>sp|PRIM_HCMVT|DNA primase|Human cytomegalovirus (strain Towne) (HHV-5)
Query: 4 CVEVQRC 10
C++ Q+C
Sbjct: 45 CLQTQKC 51
>sp|DPOL_HBVB7|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCAE 354
>sp|DPOL_HBVB3|PROTEIN P|Hepatitis B virus genotype B2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCTE 354
>sp|DPOL_HBVF6|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|PRIM_HCMVA|DNA primase|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 4 CVEVQRC 10
C++ Q+C
Sbjct: 45 CLQTQKC 51
>sp|DPOL_HBVF4|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|DPOL_HBVB8|PROTEIN P|Hepatitis B virus genotype B1
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCAE 354
>sp|DPOL_HBVF2|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|DPOL_HBVF3|PROTEIN P|Hepatitis B virus genotype F1
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|PG200_VACCC|PROTEIN OPG200|Vaccinia virus (strain Copenhagen) (VACV)
Query: 4 CVEVQRC 10
C E+ RC
Sbjct: 83 CTEIIRC 89
>sp|DPOL_HBVH3|PROTEIN P|Hepatitis B virus genotype H
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|DPOL_HBVH1|PROTEIN P|Hepatitis B virus genotype H
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|DPOL_HBVF1|PROTEIN P|Hepatitis B virus genotype F2
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
>sp|POLG_TMUV|GENOME polyprotein|Tembusu virus (TMUV)
Query: 4 CVEVQRC 10
CV++ RC
Sbjct: 3139 CVQLIRC 3145
>sp|DPOL_HBVH2|PROTEIN P|Hepatitis B virus genotype H
Query: 1 WPPCVE 6
W PC E
Sbjct: 349 WGPCYE 354
26|Sequence|126|135|EVQRCSGCCN
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 2 VQRCSGCCN 10
V+RCSGCCN
Sbjct: 74 VKRCSGCCN 82
>sp|NEC2_EBVB9|NUCLEAR egress protein 2|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 EVQRCSG 7
EV+RCSG
Sbjct: 27 EVERCSG 33
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 2 VQRCSGCCN 10
+ RC GCCN
Sbjct: 64 LMRCGGCCN 72
>sp|SPIKE_CVHNL|SPIKE glycoprotein|Human coronavirus NL63 (HCoV-NL63)
Query: 5 CSGCCN 10
C GCCN
Sbjct: 1323 CCGCCN 1328
>sp|SPIKE_CVHOC|SPIKE glycoprotein|Human coronavirus OC43 (HCoV-OC43)
Query: 3 QRCSGCCN 10
++C GCC+
Sbjct: 1330 KKCGGCCD 1337
>sp|Y206_ADE07|UNCHARACTERIZED 20.6 kDa early protein|Human adenovirus B serotype 7
Query: 2 VQRCSG 7
VQRC G
Sbjct: 3 VQRCQG 8
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 2 VQRCSGC 8
+Q C+GC
Sbjct: 1350 LQPCTGC 1356
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 RCSGC 8
RC GC
Sbjct: 1298 RCKGC 1302
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 4 RCSGC 8
RC GC
Sbjct: 1298 RCKGC 1302
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 VQRCSGCC 9
+ RC CC
Sbjct: 783 LMRCCSCC 790
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 VQRCSGCC 9
+ RC CC
Sbjct: 783 LMRCCSCC 790
>sp|POLSF_SINDV|FRAMESHIFTED structural polyprotein|Sindbis virus (SINV)
Query: 2 VQRCSGCC 9
+ RC CC
Sbjct: 783 LMRCCSCC 790
>sp|L_MABVM|RNA-DIRECTED RNA polymerase L|Lake Victoria marburgvirus (strain Musoke-80)
Query: 3 QRCSGC 8
CSGC
Sbjct: 2282 HECSGC 2287
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 4 RCSGC 8
RC GC
Sbjct: 1118 RCMGC 1122
>sp|POLS_WEEV|STRUCTURAL polyprotein|Western equine encephalitis virus (WEEV)
Query: 4 RCSGCC 9
RC CC
Sbjct: 776 RCFSCC 781
>sp|VE8E2_HPV51|PROTEIN E8^E2C|Human papillomavirus 51
Query: 3 QRCSGCCN 10
QRCS C +
Sbjct: 11 QRCSTCSD 18
>sp|SPIKE_MERS1|SPIKE glycoprotein|Middle East respiratory syndrome-related coronavirus
Query: 4 RCSGCCN 10
+C+ CC+
Sbjct: 1332 KCNRCCD 1338
>sp|ITP_HHV11|INNER tegument protein|Human herpesvirus 1 (strain 17)
Query: 1 EVQRCSGC 8
EVQ+ GC
Sbjct: 452 EVQQLFGC 459
>sp|VNB_INBOR|GLYCOPROTEIN NB|Influenza B virus (strain B/Oregon/5/1980)
Query: 4 RCSGC 8
+CSGC
Sbjct: 61 KCSGC 65
27|Sequence|131|140|SGCCNNRNVQ
>sp|R1AB_CVHNL|REPLICASE polyprotein 1ab|Human coronavirus NL63 (HCoV-NL63)
Query: 1 SGCCNN 6
+GCC+N
Sbjct: 4186 TGCCDN 4191
Query: 1 SGCCNNRNVQ 10
S CNN NV+
Sbjct: 4750 SDSCNNVNVR 4759
>sp|ENV_SFV1|ENVELOPE glycoprotein gp130|Simian foamy virus type 1
Query: 1 SGCCNNR 7
SGC NN+
Sbjct: 563 SGCNNNK 569
>sp|VE1_HPVR7|REPLICATION protein E1|Human papillomavirus type RTRX7
Query: 3 CCNNR 7
CCN+R
Sbjct: 190 CCNHR 194
>sp|CAPSD_TTVG1|CAPSID protein|Torque teno midi virus 1
Query: 2 GCCNN 6
GCCN
Sbjct: 246 GCCNE 250
>sp|VEGFH_ORFN2|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ2) (OV
Query: 2 GCCNNRNVQ 10
GCCN+ +++
Sbjct: 69 GCCNDESLE 77
>sp|L_BCCV|RNA-DIRECTED RNA polymerase L|Black Creek Canal orthohantavirus (BCCV)
Query: 5 NNRNVQ 10
NN+NVQ
Sbjct: 1643 NNQNVQ 1648
>sp|UL88_HHV6Z|PROTEIN U59|Human herpesvirus 6B (strain Z29)
Query: 1 SGCCNNRNV 9
SGC N RNV
Sbjct: 52 SGCVN-RNV 59
>sp|UL88_HHV6U|PROTEIN U59|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 SGCCNNRNV 9
SGC N RNV
Sbjct: 52 SGCVN-RNV 59
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 1 SGCCNNRNVQ 10
S CNN NV+
Sbjct: 4775 SSNCNNFNVK 4784
>sp|VE2_HPV04|REGULATORY protein E2|Human papillomavirus 4
Query: 1 SGCCN 5
S CCN
Sbjct: 344 SNCCN 348
>sp|VEGFH_ORFN7|VASCULAR endothelial growth factor homolog|Orf virus (strain NZ7) (OV
Query: 1 SGCCN 5
SGCCN
Sbjct: 78 SGCCN 82
28|Sequence|136|145|NRNVQCRPTQ
>sp|IL10H_HCMVA|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain AD169)
Query: 1 NRNVQCRP 8
N QCRP
Sbjct: 32 NTKPQCRP 39
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 QCRPTQ 10
QCRP +
Sbjct: 1491 QCRPVE 1496
>sp|IL10H_HCMVM|VIRAL interleukin-10 homolog|Human cytomegalovirus (strain Merlin)
Query: 1 NRNVQCRP 8
N QCRP
Sbjct: 33 NTKPQCRP 40
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 5 QCRPTQ 10
QCRP +
Sbjct: 1491 QCRPVE 1496
>sp|GP_CCHFI|ENVELOPMENT polyprotein|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 NRNVQCRPT 9
+RN +C PT
Sbjct: 1188 SRNWRCNPT 1196
>sp|L_MACHU|RNA-DIRECTED RNA polymerase L|Machupo virus (MACV)
Query: 2 RNVQCRP 8
+ V CRP
Sbjct: 2192 KGVMCRP 2198
>sp|POLG_HE701|GENOME polyprotein|Human enterovirus 70 (strain J670/71)
Query: 5 QCRPT 9
+CRPT
Sbjct: 1386 KCRPT 1390
>sp|UL18_HCMVM|MEMBRANE glycoprotein UL18|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 1 NRNVQCRPTQ 10
N+N CR T
Sbjct: 280 NQNYTCRVTH 289
>sp|UL18_HCMVA|GLYCOPROTEIN UL18|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 NRNVQCRPTQ 10
N+N CR T
Sbjct: 280 NQNYTCRVTH 289
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 RNVQCRPTQ 10
++ CRPT+
Sbjct: 207 KDTFCRPTE 215
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 3 NVQCRPTQ 10
NVQ PT+
Sbjct: 1783 NVQMEPTE 1790
>sp|E1B55_ADE40|E1B 55 kDa protein|Human adenovirus F serotype 40
Query: 4 VQCRPTQ 10
V+CRP +
Sbjct: 431 VRCRPCE 437
>sp|PG190_MONPV|PROTEIN OPG190|Monkeypox virus (MPXV)
Query: 3 NVQCRPTQ 10
N +C+P Q
Sbjct: 127 NAECQPLQ 134
29|Sequence|141|150|CRPTQVQLRP
>sp|UL38_HHV6U|APOPTOSIS inhibitor U19|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 CRPTQVQLRP 10
CRPT+ L+P
Sbjct: 211 CRPTEELLQP 220
>sp|NCAP_PUUMS|NUCLEOPROTEIN virus (strain Sotkamo/V-2969/81)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 207 PTQIQVR 213
>sp|NCAP_PUUMB|NUCLEOPROTEIN virus (strain Berkel)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 164 PTQIQVR 170
>sp|NCAP_PUUMP|NUCLEOPROTEIN virus (strain P360)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 207 PTQIQVR 213
>sp|NCAP_PUUMK|NUCLEOPROTEIN virus (strain K27)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 207 PTQIQVR 213
>sp|NCAP_PUUMU|NUCLEOPROTEIN virus (strain Udmurtia/894CG/91)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 207 PTQIQVR 213
>sp|NCAP_PUUME|NUCLEOPROTEIN virus (strain Evo/12CG/93)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 207 PTQIQVR 213
>sp|NCAP_PUUMG|NUCLEOPROTEIN virus (strain Bank vole/Russia/CG1820/1984)
Query: 3 PTQVQLR 9
PTQ+Q+R
Sbjct: 207 PTQIQVR 213
>sp|LTP_EBVG|LARGE tegument protein deneddylase|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PTQVQLRP 10
PT V LRP
Sbjct: 2863 PTAVGLRP 2870
>sp|LTP_EBVA8|LARGE tegument protein deneddylase|Epstein-Barr virus (strain AG876)
Query: 3 PTQVQLRP 10
PT V LRP
Sbjct: 2841 PTAVGLRP 2848
>sp|LTP_EBVB9|LARGE tegument protein deneddylase|Epstein-Barr virus (strain B95-8)
Query: 3 PTQVQLRP 10
PT V LRP
Sbjct: 2836 PTAVGLRP 2843
>sp|UL38_HHV6H|APOPTOSIS inhibitor U19|Human herpesvirus 6B (HHV-6 variant
Query: 1 CRPTQVQLRP 10
C PT+ L+P
Sbjct: 211 CWPTEELLQP 220
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 2 RPTQVQLRP 10
P QV+L+P
Sbjct: 2405 EPEQVELQP 2413
>sp|VL1_HPV45|MAJOR capsid protein L1|Human papillomavirus 45
Query: 1 CRPTQVQ 7
C+P Q+Q
Sbjct: 202 CKPAQLQ 208
30|Sequence|146|155|VQLRPVQVRK
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 4 RPVQVRK 10
RP +VRK
Sbjct: 337 RPAEVRK 343
>sp|POLG_NVN68|GENOME polyprotein|Norovirus (strain Human/NoV/United
Query: 5 PVQVRK 10
P+QVRK
Sbjct: 1658 PIQVRK 1663
31|Sequence|151|160|VQVRKIEIVR
***** No hits found ******
32|Sequence|156|165|IEIVRKKPIF
>sp|AN_HHV2|ALKALINE nuclease|Human herpesvirus 2 (HHV-2) (Human
Query: 2 EIVRKKPIF 10
E+VR++PIF
Sbjct: 474 ELVRREPIF 482
>sp|AN_HHV11|ALKALINE nuclease|Human herpesvirus 1 (strain 17)
Query: 2 EIVRKKPIF 10
++VR++P+F
Sbjct: 484 DLVRREPVF 492
>sp|VE6_HPV15|PROTEIN E6|Human papillomavirus 15
Query: 1 IEIVRKKPI 9
IEIV +KP+
Sbjct: 86 IEIVEQKPV 94
>sp|POLS_ONNVS|STRUCTURAL polyprotein|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 IEIVRKKP 8
I+++R KP
Sbjct: 25 IQVIRPKP 32
>sp|L_CCHFI|RNA-DIRECTED RNA polymerase L|Crimean-Congo hemorrhagic fever virus (strain
Query: 1 IEIVRKKP 8
++I+RK P
Sbjct: 1767 LQIIRKNP 1774
33|Sequence|161|170|KKPIFKKATV
>sp|POLG_CX16G|GENOME polyprotein|Coxsackievirus A16 (strain G-10)
Query: 1 KKPIFKKATV 10
KKPI + ATV
Sbjct: 1538 KKPILRTATV 1547
>sp|POLG_HE71M|GENOME polyprotein|Human enterovirus 71 (strain 7423/MS/87)
Query: 1 KKPIFKKATV 10
KKP+ + ATV
Sbjct: 1538 KKPVLRTATV 1547
>sp|POLG_CX16T|GENOME polyprotein|Coxsackievirus A16 (strain Tainan/5079/98)
Query: 1 KKPIFKKATV 10
KKP+ + ATV
Sbjct: 1538 KKPVLRTATV 1547
>sp|POLG_HE71B|GENOME polyprotein|Human enterovirus 71 (strain USA/BrCr/1970)
Query: 1 KKPIFKKATV 10
KKP+ + ATV
Sbjct: 1538 KKPVLRTATV 1547
>sp|IE1_HHV6U|IMMEDIATE-EARLY protein 1|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KPIFKKATV 10
K IF KATV
Sbjct: 214 KDIFSKATV 222
>sp|POLG_HE71|GENOME polyprotein|Human enterovirus 71 (EV71) (EV-71)
Query: 1 KKPIFKKATV 10
KKP + ATV
Sbjct: 1538 KKPALRTATV 1547
>sp|L_ISFV|RNA-DIRECTED RNA polymerase L|Isfahan virus (ISFV)
Query: 1 KKPIFKKAT 9
K PI K+AT
Sbjct: 1162 KIPIIKRAT 1170
>sp|L_VSNJO|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KKPIFKKAT 9
K PI K+AT
Sbjct: 1172 KIPIIKRAT 1180
>sp|L_VSNJH|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis New Jersey virus
Query: 1 KKPIFKKAT 9
K PI K+AT
Sbjct: 1172 KIPIIKRAT 1180
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KKPIFKKATV 10
++ IF KATV
Sbjct: 1545 QQGIFNKATV 1554
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 KKPIFKKATV 10
++ IF KATV
Sbjct: 1545 QQGIFNKATV 1554
>sp|POLG_HCVJ6|GENOME polyprotein|Hepatitis C virus genotype 2a
Query: 1 KKPIFKKATV 10
K+P ++ ATV
Sbjct: 2302 KRPDYQPATV 2311
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 KKPIFKKATV 10
K+P +KAT+
Sbjct: 1500 KRPELRKATL 1509
>sp|R1AB_SARS|REPLICASE polyprotein 1ab|Severe acute respiratory syndrome coronavirus
Query: 2 KPIFKKATV 10
KP K ATV
Sbjct: 3827 KPCIKVATV 3835
>sp|R1A_SARS|REPLICASE polyprotein 1a|Severe acute respiratory syndrome coronavirus
Query: 2 KPIFKKATV 10
KP K ATV
Sbjct: 3827 KPCIKVATV 3835
34|Sequence|166|175|KKATVTLEDH
>sp|PG072_VARV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus
Query: 1 KKATVTLEDH 10
+ AT+ +ED+
Sbjct: 48 RHATIAIEDN 57
>sp|PG072_VAR67|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Variola virus (isolate
Query: 1 KKATVTLEDH 10
+ AT+ +ED+
Sbjct: 48 RHATIAIEDN 57
>sp|PG072_VACCC|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Vaccinia virus (strain
Query: 1 KKATVTLEDH 10
+ AT+ +ED+
Sbjct: 48 RHATIAIEDN 57
>sp|PG072_MONPV|PROBABLE FAD-linked sulfhydryl oxidase OPG072|Monkeypox virus (MPXV)
Query: 1 KKATVTLEDH 10
+ AT+ +ED+
Sbjct: 48 RHATIAIEDN 57
35|Sequence|171|180|TLEDHLACKC
>sp|L_EBOSU|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Human/Uganda/Gulu/2000)
Query: 2 LEDHLACK 9
LED L CK
Sbjct: 1012 LEDELVCK 1019
>sp|L_EBOSM|RNA-DIRECTED RNA polymerase L|Sudan ebolavirus (strain Maleo-79) (SEBOV)
Query: 2 LEDHLACK 9
LED L CK
Sbjct: 1012 LEDELVCK 1019
>sp|TEG5_VZVO|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Oka vaccine)
Query: 2 LEDHLA 7
LEDHLA
Sbjct: 453 LEDHLA 458
>sp|TEG5_VZVD|TEGUMENT protein UL47 homolog|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 LEDHLA 7
LEDHLA
Sbjct: 468 LEDHLA 473
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 3 EDHLACKC 10
ED L C C
Sbjct: 2113 EDELKCPC 2120
>sp|L_EBORR|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Reston-89) (REBOV)
Query: 2 LEDHLACK 9
LED + CK
Sbjct: 1011 LEDEMVCK 1018
>sp|L_EBORE|RNA-DIRECTED RNA polymerase L|Reston ebolavirus (strain Philippines-96) (REBOV)
Query: 2 LEDHLACK 9
LED + CK
Sbjct: 1011 LEDEMVCK 1018
>sp|L_EBOZM|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Mayinga-76) (ZEBOV)
Query: 3 EDHLACK 9
++HL+CK
Sbjct: 2017 QNHLSCK 2023
Query: 2 LEDHLACK 9
ED + CK
Sbjct: 1011 FEDEMVCK 1018
>sp|L_EBOZ5|RNA-DIRECTED RNA polymerase L|Zaire ebolavirus (strain Kikwit-95) (ZEBOV)
Query: 3 EDHLACK 9
++HL+CK
Sbjct: 2017 QNHLSCK 2023
Query: 2 LEDHLACK 9
ED + CK
Sbjct: 1011 FEDEMVCK 1018
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 2 LEDHLACKC 10
L+DH++ C
Sbjct: 1498 LDDHISVDC 1506
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 2 LEDHLACKC 10
L+DH++ C
Sbjct: 1498 LDDHISVDC 1506
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 2 LEDHLACKC 10
L+DH++ C
Sbjct: 1498 LDDHISVDC 1506
>sp|IR10_HCMVA|PROTEIN IRL10|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 5 HLACKC 10
HL CKC
Sbjct: 40 HLTCKC 45
>sp|POLG_HCVEV|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 EDHLACKC 10
+D+L C C
Sbjct: 2108 QDNLKCPC 2115
>sp|POLG_HCVSA|GENOME polyprotein|Hepatitis C virus genotype 5a
Query: 3 EDHLACKC 10
+D+L C C
Sbjct: 2108 QDNLKCPC 2115
Query: 2 LEDHLAC 8
L HLAC
Sbjct: 925 LAKHLAC 931
>sp|IR10_HCMVM|PROTEIN IRL10|Human cytomegalovirus (strain Merlin) (HHV-5)
Query: 5 HLACKC 10
HL CKC
Sbjct: 40 HLTCKC 45
>sp|L_VSIVN|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 HLACK 9
H+ACK
Sbjct: 1296 HIACK 1300
>sp|L_VSIVM|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 HLACK 9
H+ACK
Sbjct: 1296 HIACK 1300
>sp|L_VSIVA|RNA-DIRECTED RNA polymerase L|Vesicular stomatitis Indiana virus (strain
Query: 5 HLACK 9
H+ACK
Sbjct: 1296 HIACK 1300
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 LEDHLACKC 10
+ED C+C
Sbjct: 1111 MEDLKGCRC 1119
>sp|VE2_HPV48|REGULATORY protein E2|Human papillomavirus type 48
Query: 2 LEDHLA 7
L+DHLA
Sbjct: 31 LKDHLA 36
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 4 DHLAC 8
DHL C
Sbjct: 1953 DHLVC 1957
>sp|LTP_VZVO|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Oka
Query: 1 TLEDHLACK 9
+L++H +C+
Sbjct: 2684 SLDEHRSCR 2692
>sp|LTP_VZVD|LARGE tegument protein deneddylase|Varicella-zoster virus (strain Dumas)
Query: 1 TLEDHLACK 9
+L++H +C+
Sbjct: 2684 SLDEHRSCR 2692
>sp|POLG_HCVVP|GENOME polyprotein|Hepatitis C virus genotype 6h
Query: 4 DHLACKC 10
D+L C C
Sbjct: 2109 DNLKCPC 2115
>sp|POLG_HCVVN|GENOME polyprotein|Hepatitis C virus genotype 6d
Query: 4 DHLACKC 10
D+L C C
Sbjct: 2106 DNLKCPC 2112
>sp|NSP1N_ROTB2|NON-STRUCTURAL protein 1|Rotavirus X (isolate
Query: 2 LEDHLAC 8
L+ HLAC
Sbjct: 277 LDSHLAC 283
>sp|NSP1N_ROTJ1|NON-STRUCTURAL protein 1|Rotavirus X (strain
Query: 2 LEDHLAC 8
L+ HLAC
Sbjct: 277 LDSHLAC 283
>sp|POLG_HCV77|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 DHLACKC 10
D+L C C
Sbjct: 2108 DNLKCPC 2114
>sp|POLG_HCVJ1|GENOME polyprotein|Hepatitis C virus genotype 1b
Query: 4 DHLACKC 10
D+L C C
Sbjct: 2108 DNLKCPC 2114
>sp|POLG_HCV1|GENOME polyprotein|Hepatitis C virus genotype 1a
Query: 4 DHLACKC 10
D+L C C
Sbjct: 2108 DNLKCPC 2114
>sp|TRX2_HHV6Z|TRIPLEX capsid protein 2|Human herpesvirus 6B (strain Z29)
Query: 1 TLEDH--LACKC 10
TLEDH L KC
Sbjct: 217 TLEDHSMLLIKC 228
36|Sequence|176|185|LACKCETVAA
>sp|POLN_EEVVM|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 CKCETVAA 10
C+CET+ +
Sbjct: 274 CRCETIVS 281
>sp|POLN_EEVV3|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 CKCETVAA 10
C+CET+ +
Sbjct: 274 CRCETIVS 281
>sp|POLN_EEVVP|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 CKCETVAA 10
C+CET+ +
Sbjct: 274 CRCETIVS 281
>sp|POLN_EEVVT|POLYPROTEIN P1234|Venezuelan equine encephalitis virus (strain
Query: 3 CKCETVAA 10
C+CET+ +
Sbjct: 274 CRCETIVS 281
>sp|POLN_SAGV|POLYPROTEIN P1234|Sagiyama virus (SAGV)
Query: 1 LACKCETVAA 10
C+C+TV +
Sbjct: 271 FTCRCDTVVS 280
>sp|POLN_GETV|POLYPROTEIN P1234|Getah virus (GETV)
Query: 1 LACKCETVAA 10
C+C+TV +
Sbjct: 271 FTCRCDTVVS 280
>sp|POLN_CHIK3|POLYPROTEIN P1234|Chikungunya virus (strain 37997) (CHIKV)
Query: 1 LACKCETVAA 10
C+C+TV +
Sbjct: 272 FTCRCDTVVS 281
>sp|POLN_CHIKS|POLYPROTEIN P1234|Chikungunya virus (strain S27-African prototype)
Query: 1 LACKCETVAA 10
C+C+TV +
Sbjct: 272 FTCRCDTVVS 281
>sp|OBP_HHV11|REPLICATION origin-binding protein|Human herpesvirus 1 (strain 17)
Query: 1 LACKCETVAA 10
L C C T+AA
Sbjct: 643 LLCLCSTMAA 652
>sp|POLN_BFV|POLYPROTEIN P1234|Barmah forest virus (BFV)
Query: 1 LACKCETVAA 10
C+C+T+ +
Sbjct: 270 FTCRCDTIVS 279
>sp|POLN_MAYAB|POLYPROTEIN P1234|Mayaro virus (strain Brazil) (MAYV)
Query: 3 CKCETVAA 10
C+C+T+ +
Sbjct: 274 CRCDTIVS 281
>sp|POLN_ONNVS|POLYPROTEIN P1234|O'nyong-nyong virus (strain SG650) (ONNV)
Query: 1 LACKCETVAA 10
C+C+T+ +
Sbjct: 272 FTCRCDTIVS 281
>sp|POLN_ONNVI|POLYPROTEIN P1234|O'nyong-nyong virus (strain Igbo Ora)
Query: 1 LACKCETVAA 10
C+C+T+ +
Sbjct: 272 FTCRCDTIVS 281
>sp|POLN_ONNVG|POLYPROTEIN P1234|O'nyong-nyong virus (strain Gulu) (ONNV)
Query: 1 LACKCETVAA 10
C+C+T+ +
Sbjct: 272 FTCRCDTIVS 281
>sp|HBEAG_HBVA4|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCTCPTVQA 19
>sp|HBEAG_HBVB1|EXTERNAL core antigen|Hepatitis B virus genotype B1
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVC2|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|R1AB_CVH22|REPLICASE polyprotein 1ab|Human coronavirus 229E (HCoV-229E)
Query: 3 CKCETVA 9
C+C TVA
Sbjct: 5799 CQCGTVA 5805
>sp|HBEAG_HBVD7|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVC7|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVC3|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVB2|EXTERNAL core antigen|Hepatitis B virus genotype B2
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVD3|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVCJ|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVC0|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVB4|EXTERNAL core antigen|Hepatitis B virus genotype B/C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVD5|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVF6|EXTERNAL core antigen|Hepatitis B virus genotype F2
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|HBEAG_HBVA6|EXTERNAL core antigen|Hepatitis B virus genotype A1
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCTCPTVQA 19
>sp|HBEAG_HBVA2|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCTCPTVQA 19
>sp|HBEAG_HBVC1|EXTERNAL core antigen|Hepatitis B virus genotype C
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCSCPTVQA 19
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|NCAP_MUMPZ|NUCLEOPROTEIN virus genotype N (strain
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|NCAP_MUMPM|NUCLEOPROTEIN virus genotype B (strain
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|NCAP_MUMPJ|NUCLEOPROTEIN virus genotype A (strain
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|NCAP_MUMPE|NUCLEOPROTEIN virus (strain Enders) (MuV)
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|NCAP_MUMP1|NUCLEOPROTEIN virus (strain SBL-1) (MuV)
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 MVCKCMT 183
>sp|HBEAG_HBVA7|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCTCPTVQA 19
>sp|HBEAG_HBVA3|EXTERNAL core antigen|Hepatitis B virus genotype A2
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCTCPTVQA 19
>sp|POLN_SINDV|POLYPROTEIN P1234|Sindbis virus (SINV)
Query: 3 CKCETVAA 10
C+C+TV +
Sbjct: 275 CRCDTVVS 282
>sp|POLN_SINDO|POLYPROTEIN P1234|Sindbis virus subtype Ockelbo (strain
Query: 3 CKCETVAA 10
C+C+TV +
Sbjct: 275 CRCDTVVS 282
>sp|U23_HHV6U|GLYCOPROTEIN U23|Human herpesvirus 6A (strain Uganda-1102)
Query: 1 LACKCETV 8
L C CE V
Sbjct: 8 LVCLCEEV 15
>sp|POLN_RRVN|POLYPROTEIN P1234|Ross river virus (strain NB5092)
Query: 1 LACKCETVAA 10
C+C+T+ +
Sbjct: 270 FTCRCDTIVS 279
>sp|HBEAG_HBVD6|EXTERNAL core antigen|Hepatitis B virus genotype D
Query: 1 LACKCETVAA 10
++C C TV A
Sbjct: 10 ISCTCPTVQA 19
>sp|POLN_SFV|POLYPROTEIN P1234|Semliki forest virus (SFV)
Query: 1 LACKCETVAA 10
C+C+T+ +
Sbjct: 273 FTCRCDTIVS 282
>sp|HBEAG_HBVA8|EXTERNAL core antigen|Hepatitis B virus genotype A3
Query: 1 LACKCETVAA 10
++C C T+ A
Sbjct: 10 ISCTCPTIQA 19
>sp|R1AB_CVHOC|REPLICASE polyprotein 1ab|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LACKC 5
+ACKC
Sbjct: 1747 IACKC 1751
>sp|NCAP_PIV5|NUCLEOPROTEIN virus 5 (strain W3)
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 VTCKCMT 183
>sp|NCAP_PI2HT|NUCLEOPROTEIN parainfluenza 2 virus (strain
Query: 1 LACKCET 7
+ CKC T
Sbjct: 177 VTCKCMT 183
>sp|R1A_CVHOC|REPLICASE polyprotein 1a|Human coronavirus OC43 (HCoV-OC43)
Query: 1 LACKC 5
+ACKC
Sbjct: 1747 IACKC 1751
37|Sequence|181|190|ETVAAARPVT
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 ETVAAARP 8
ETVA RP
Sbjct: 331 ETVAIDRP 338
38|Sequence|186|195|ARPVTRSPGG
>sp|ICP47_HHV11|ICP47 protein|Human herpesvirus 1 (strain 17)
Query: 2 RPVTRSPG 9
RP+ RSPG
Sbjct: 49 RPLLRSPG 56
>sp|ENV_HV2SB|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 700 RPVFSSPPG 708
>sp|ENV_HV2RO|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 708 RPVFSSPPG 716
>sp|ENV_HV2G1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 699 RPVFSSPPG 707
>sp|ENV_HV2KR|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 700 RPVFSSPPG 708
>sp|ENV_HV2NZ|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 699 RPVFSSPPG 707
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 3 PVTRSPGG 10
P+T SPG
Sbjct: 337 PITGSPGA 344
>sp|POLG_LORDV|GENOME polyprotein|Lordsdale virus (strain GII/Human/United
Query: 2 RPVTRSPGG 10
R VTR P G
Sbjct: 1582 RTVTRDPAG 1590
>sp|ENV_HV2BE|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 707 RPVFSSPPG 715
>sp|ENV_HV2D1|ENVELOPE glycoprotein gp160|Human immunodeficiency virus type 2
Query: 2 RPVTRSPGG 10
RPV SP G
Sbjct: 698 RPVFSSPPG 706
>sp|UL13_HHV2H|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 2 (strain HG52)
Query: 3 PVTRSPG 9
PVTR PG
Sbjct: 406 PVTRVPG 412
>sp|UL13_HHV11|SERINE/THREONINE-PROTEIN kinase UL13|Human herpesvirus 1 (strain 17)
Query: 3 PVTRSPG 9
PVTR PG
Sbjct: 406 PVTRFPG 412
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 3 PVTRSPGG 10
P+T SPG
Sbjct: 337 PITGSPGA 344
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 3 PVTRSPGG 10
P+T SPG
Sbjct: 338 PITGSPGA 345
>sp|VU54_HHV6Z|PROTEIN U54|Human herpesvirus 6B (strain Z29)
Query: 1 ARPVTRSP 8
++PV+R+P
Sbjct: 372 SQPVSRAP 379
>sp|NRAM_I85A3|NEURAMINIDASE A virus (strain A/Chicken/Victoria/1/1985
Query: 1 ARPVTRSPGG 10
+ P+T SPG
Sbjct: 337 SNPITGSPGA 346
>sp|NRAM_I000F|NEURAMINIDASE A virus (strain A/Chicken/Weybridge
Query: 1 ARPVTRSPGG 10
+ P+T SPG
Sbjct: 337 SNPITGSPGA 346
>sp|GAG_HV2KR|GAG polyprotein|Human immunodeficiency virus type 2
Query: 3 PVTRSPGG 10
PVTR P G
Sbjct: 446 PVTRVPQG 453
>sp|POLS_GETV|STRUCTURAL polyprotein|Getah virus (GETV)
Query: 3 PVTRSPG 9
PV R+PG
Sbjct: 600 PVARAPG 606
39|Sequence|191|200|RSPGGSQEQR
>sp|POLG_BANV|GENOME polyprotein|Banzi virus (BANV)
Query: 1 RSPGGSQEQ 9
RSPGG +++
Sbjct: 2053 RSPGGQRKE 2061
>sp|POLG_WSLV|GENOME polyprotein|Wesselsbron virus (WSLV)
Query: 1 RSPGGSQE 8
RSPGG+++
Sbjct: 2066 RSPGGAKK 2073
>sp|POLG_YEFVE|GENOME polyprotein|Yellow fever virus (isolate Ethiopia/Couma/1961)
Query: 1 RSPGGSQE 8
RSPGG+++
Sbjct: 2071 RSPGGAKK 2078
>sp|POLG_YEFVU|GENOME polyprotein|Yellow fever virus (isolate Uganda/A7094A4/1948)
Query: 1 RSPGGSQE 8
RSPGG+++
Sbjct: 2071 RSPGGAKK 2078
>sp|L_DUGBA|RNA-DIRECTED RNA polymerase L|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 SPGGSQE 8
+PGGS+E
Sbjct: 213 APGGSRE 219
>sp|POLG_YEFVN|GENOME polyprotein|Yellow fever virus (isolate Angola/14FA/1971)
Query: 1 RSPGGSQ 7
RSPGG++
Sbjct: 2071 RSPGGAK 2077
>sp|VE2_HPV24|REGULATORY protein E2|Human papillomavirus 24
Query: 2 SPGGSQE 8
SPGGS+E
Sbjct: 206 SPGGSRE 212
>sp|POLG_HPEV5|GENOME polyprotein|Human parechovirus 5 (strain CT86-6760)
Query: 1 RSPGGSQEQ 9
+SP G Q+Q
Sbjct: 781 QSPYGQQQQ 789
>sp|NEF_HV2UC|PROTEIN Nef|Human immunodeficiency virus type 2
Query: 1 RSPGGS 6
RSPGGS
Sbjct: 41 RSPGGS 46
>sp|ENV_XMRV3|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP35)
Query: 1 RSPGGSQEQR 10
RSPGG + R
Sbjct: 97 RSPGGRKRTR 106
>sp|ENV_XMRV4|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP42)
Query: 1 RSPGGSQEQR 10
RSPGG + R
Sbjct: 97 RSPGGRKRTR 106
>sp|ENV_XMRV6|ENVELOPE glycoprotein|Xenotropic MuLV-related virus (isolate VP62)
Query: 1 RSPGGSQEQR 10
RSPGG + R
Sbjct: 97 RSPGGRKRTR 106
>sp|POLG_YEFVF|GENOME polyprotein|Yellow fever virus (strain French
Query: 1 RSPGGSQE 8
R+PGG+++
Sbjct: 2071 RTPGGAKK 2078
>sp|POLG_YEFV1|GENOME polyprotein|Yellow fever virus (strain 17D
Query: 1 RSPGGSQE 8
R+PGG+++
Sbjct: 2071 RAPGGAKK 2078
>sp|POLG_YEFVT|GENOME polyprotein|Yellow fever virus (strain Trinidad/TRINID79A/1979)
Query: 1 RSPGGSQE 8
R+PGG+++
Sbjct: 2071 RAPGGAKK 2078
>sp|POLG_YEFVA|GENOME polyprotein|Yellow fever virus (strain Ghana/Asibi/1927)
Query: 1 RSPGGSQE 8
R+PGG+++
Sbjct: 2071 RAPGGAKK 2078
>sp|L_RABVP|LARGE structural protein|Rabies virus (strain Pasteur vaccins
Query: 2 SPGGSQE 8
SPG SQE
Sbjct: 740 SPGLSQE 746
>sp|L_RABVR|LARGE structural protein|Rabies virus (strain China/MRV) (RABV)
Query: 2 SPGGSQE 8
SPG SQE
Sbjct: 740 SPGLSQE 746
>sp|L_RABVA|LARGE structural protein|Rabies virus (strain PM1503/AVO1) (RABV)
Query: 2 SPGGSQE 8
SPG SQE
Sbjct: 740 SPGLSQE 746
>sp|POLG_YEFVC|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RSPGGSQE 8
R+PGG+++
Sbjct: 2071 RAPGGAKK 2078
>sp|L_RABVS|LARGE structural protein|Rabies virus (strain SAD B19)
Query: 2 SPGGSQE 8
SPG SQE
Sbjct: 740 SPGLSQE 746
>sp|L_RABVH|LARGE structural protein|Rabies virus (strain HEP-Flury) (RABV)
Query: 2 SPGGSQE 8
SPG SQE
Sbjct: 740 SPGLSQE 746
>sp|L_RABVE|LARGE structural protein|Rabies virus (strain ERA) (RABV)
Query: 2 SPGGSQE 8
SPG SQE
Sbjct: 740 SPGLSQE 746
>sp|BZLF1_EBVG|LYTIC switch protein BZLF1|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 3 PGGSQEQR 10
PG +QEQ+
Sbjct: 133 PGANQEQQ 140
>sp|POLG_HRV15|GENOME polyprotein|Human rhinovirus C (strain C15)
Query: 1 RSPGGSQE 8
R P GSQ+
Sbjct: 337 RLPSGSQQ 344
>sp|CVC1_HCMVA|CAPSID vertex component 1|Human cytomegalovirus (strain AD169) (HHV-5)
Query: 1 RSPGGSQEQ 9
R+PGG ++
Sbjct: 57 RAPGGDEDD 65
>sp|POLG_YEFVI|GENOME polyprotein|Yellow fever virus (isolate Ivory
Query: 1 RSPGGSQ 7
R+PGG++
Sbjct: 2071 RAPGGAK 2077
>sp|NCAP_PI4HB|NUCLEOPROTEIN parainfluenza 4b virus (strain
Query: 3 PGGSQEQR 10
P GS+E+R
Sbjct: 188 PTGSEERR 195
>sp|NCAP_PI4HA|NUCLEOPROTEIN parainfluenza 4a virus (strain
Query: 3 PGGSQEQR 10
P GS+E+R
Sbjct: 188 PTGSEERR 195
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 2 SPGGSQEQR 10
S GGS E+R
Sbjct: 893 SSGGSNERR 901
>sp|CAPSD_HBOC2|MINOR capsid protein VP1|Human bocavirus 2 (HBoV2) (Human
Query: 1 RSPGGSQEQR 10
+ P GS E+R
Sbjct: 138 QQPSGSMEER 147
>sp|POLG_ALKV|GENOME polyprotein|Alkhumra hemorrhagic fever virus (ALKV)
Query: 1 RSPGGSQ 7
++PGGS+
Sbjct: 2076 KTPGGSE 2082
40|Sequence|196|205|SQEQRAKTPQ
>sp|DPOL_ADE02|DNA polymerase|Human adenovirus C serotype 2
Query: 1 SQEQRAKTP 9
S+++RA TP
Sbjct: 915 SEDERAPTP 923
>sp|DPOL_ADE05|DNA polymerase|Human adenovirus C serotype 5
Query: 1 SQEQRAKTP 9
S+++RA TP
Sbjct: 915 SEDERAPTP 923
>sp|PP85_HHV6U|PHOSPHOPROTEIN 85|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 EQRAKTP 9
EQR +TP
Sbjct: 572 EQRRRTP 578
>sp|VE2_HPV57|REGULATORY protein E2|Human papillomavirus 57
Query: 1 SQEQRAK 7
SQEQRA+
Sbjct: 355 SQEQRAE 361
41|Sequence|201|210|AKTPQTRVTI
>sp|L_RVFV|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (RVFV)
Query: 5 QTRVTI 10
QTRVTI
Sbjct: 1509 QTRVTI 1514
>sp|L_RVFVZ|RNA-DIRECTED RNA polymerase L|Rift valley fever virus (strain
Query: 5 QTRVTI 10
QTRVTI
Sbjct: 1509 QTRVTI 1514
42|Sequence|206|215|TRVTIRTVRV
>sp|NCAP_SFTSV|NUCLEOPROTEIN phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe
Query: 1 TRVTIRTVRV 10
TR++I VRV
Sbjct: 98 TRLSITPVRV 107
43|Sequence|211|220|RTVRVRRPPK
>sp|GP_BHAV|ENVELOPMENT polyprotein|Bhanja virus (BHAV)
Query: 1 RTVRVRRPPK 10
R R+RR PK
Sbjct: 1054 RRSRIRREPK 1063
>sp|POLG_DEN1B|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RTVRVRRPPK 10
+ VRV+RP K
Sbjct: 3068 KVVRVQRPAK 3077
>sp|POLG_DEN1W|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RTVRVRRPPK 10
+ VRV+RP K
Sbjct: 3068 KVVRVQRPAK 3077
>sp|POLG_DEN1S|GENOME polyprotein|Dengue virus type 1 (strain
Query: 1 RTVRVRRPPK 10
+ VRV+RP K
Sbjct: 3067 KVVRVQRPAK 3076
>sp|POLG_DEN2N|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3067 KVVRVQRP 3074
>sp|POLG_DEN28|GENOME polyprotein|Dengue virus type 2 (isolate
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3067 KVVRVQRP 3074
>sp|POLG_DEN2J|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3067 KVVRVQRP 3074
>sp|POLG_DEN26|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3067 KVVRVQRP 3074
>sp|VP10_CTFVL|MICROTUBULE-ASSOCIATED protein VP10|Colorado tick fever virus (strain
Query: 1 RTVRVRRPPK 10
RT+RV P K
Sbjct: 492 RTIRVITPDK 501
>sp|POLG_DEN2Q|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3067 KVVRVQRP 3074
>sp|POLG_DEN27|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3067 KVVRVQRP 3074
>sp|POLG_DEN2P|GENOME polyprotein|Dengue virus type 2 (strain
Query: 1 RTVRVRRP 8
+ VRV+RP
Sbjct: 3064 KVVRVQRP 3071
>sp|NCAP_INCJH|NUCLEOPROTEIN C virus (strain C/Johannesburg/1/1966)
Query: 3 VRVRRPPK 10
+RV+RP K
Sbjct: 512 IRVKRPKK 519
>sp|NCAP_INCCA|NUCLEOPROTEIN C virus (strain C/California/1978)
Query: 3 VRVRRPPK 10
+RV+RP K
Sbjct: 512 IRVKRPKK 519
>sp|NCAP_INCAA|NUCLEOPROTEIN C virus (strain C/Ann
Query: 3 VRVRRPPK 10
+RV+RP K
Sbjct: 512 IRVKRPKK 519
>sp|LTP_HCMVM|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Merlin)
Query: 3 VRVRRPP 9
VRV RPP
Sbjct: 2050 VRVLRPP 2056
>sp|LTP_HCMVA|LARGE tegument protein deneddylase|Human cytomegalovirus (strain AD169)
Query: 3 VRVRRPP 9
VRV RPP
Sbjct: 2050 VRVLRPP 2056
>sp|LTP_HCMVT|LARGE tegument protein deneddylase|Human cytomegalovirus (strain Towne)
Query: 3 VRVRRPP 9
VRV RPP
Sbjct: 2051 VRVLRPP 2057
>sp|POLG_SVM10|GENOME polyprotein|Sapporo virus (isolate
Query: 1 RTVRVRRPP 9
RTV + PP
Sbjct: 1631 RTVDINSPP 1639
>sp|EBNA4_EBVA8|EPSTEIN-BARR nuclear antigen 4|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 2 TVRVRRPP 9
TV +RRPP
Sbjct: 451 TVVLRRPP 458
>sp|PHOSP_HENDH|PHOSPHOPROTEIN virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 TVRVRRPPK 10
++R+R PP+
Sbjct: 355 SLRLREPPQ 363
>sp|W_HENDH|PROTEIN W|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 2 TVRVRRPPK 10
++R+R PP+
Sbjct: 355 SLRLREPPQ 363
>sp|GC_HHV2H|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain HG52)
Query: 3 VRVRRPPK 10
VRV RPP
Sbjct: 230 VRVFRPPS 237
>sp|GC_HHV23|ENVELOPE glycoprotein C|Human herpesvirus 2 (strain 333)
Query: 3 VRVRRPPK 10
VRV RPP
Sbjct: 230 VRVFRPPS 237
44|Sequence|216|225|RRPPKGKHRK
>sp|L_MUMPZ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype N (strain
Query: 1 RRPPKGK 7
RRP KGK
Sbjct: 990 RRPGKGK 996
>sp|L_MUMPM|RNA-DIRECTED RNA polymerase L|Mumps virus genotype B (strain
Query: 1 RRPPKGK 7
RRP KGK
Sbjct: 990 RRPGKGK 996
>sp|L_MUMPJ|RNA-DIRECTED RNA polymerase L|Mumps virus genotype A (strain
Query: 1 RRPPKGK 7
RRP KGK
Sbjct: 990 RRPGKGK 996
>sp|ORF75_HHV8P|PROTEIN ORF75|Human herpesvirus 8 type P
Query: 1 RRPPKGKHR 9
R PP+G R
Sbjct: 85 RSPPRGSER 93
>sp|UL32_VZVD|PACKAGING protein UL32|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 2 RPPKGK 7
RPP GK
Sbjct: 204 RPPPGK 209
>sp|CAPSD_TTVB1|CAPSID protein|Torque teno mini virus 1
Query: 1 RRPPKGKH 8
R PP+G+H
Sbjct: 468 RHPPEGQH 475
>sp|POLG_HCVBB|GENOME polyprotein|Hepatitis C virus genotype 2c
Query: 2 RPPKG 6
RPPKG
Sbjct: 545 RPPKG 549
>sp|LT_POVKI|LARGE T antigen|KI polyomavirus (isolate Stockholm 350)
Query: 3 PPKGKH 8
PPK KH
Sbjct: 134 PPKKKH 139
>sp|LT_POVK6|LARGE T antigen|KI polyomavirus (isolate Stockholm 60)
Query: 3 PPKGKH 8
PPK KH
Sbjct: 134 PPKKKH 139
>sp|VL1_HPV35|MAJOR capsid protein L1|Human papillomavirus 35
Query: 2 RPPKGKH 8
RPP G+H
Sbjct: 162 RPPIGEH 168
>sp|LT_POVK3|LARGE T antigen|KI polyomavirus (isolate Stockholm 380)
Query: 3 PPKGKH 8
PPK KH
Sbjct: 134 PPKKKH 139
>sp|R1AB_MERS1|REPLICASE polyprotein 1ab|Middle East respiratory syndrome-related coronavirus
Query: 2 RPPKGKHRK 10
RPP G+ K
Sbjct: 6047 RPPPGEQFK 6055
>sp|VL1_HPV58|MAJOR capsid protein L1|Human papillomavirus 58
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 189 KPPTGEH 195
>sp|VL1_HPV67|MAJOR capsid protein L1|Human papillomavirus 67
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 192 KPPTGEH 198
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 1 RRPPKGK 7
+RPP G+
Sbjct: 543 QRPPSGR 549
>sp|POLG_HCVJ8|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 RPPKG 6
RPP+G
Sbjct: 545 RPPRG 549
>sp|POLG_HCVVA|GENOME polyprotein|Hepatitis C virus genotype 2k
Query: 2 RPPKG 6
RPP+G
Sbjct: 545 RPPRG 549
>sp|POLG_HCVJP|GENOME polyprotein|Hepatitis C virus genotype 2b
Query: 2 RPPKG 6
RPP+G
Sbjct: 545 RPPRG 549
>sp|VL1_HPV52|MAJOR capsid protein L1|Human papillomavirus 52
Query: 3 PPKGK 7
PPKGK
Sbjct: 463 PPKGK 467
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 191 KPPIGEH 197
>sp|POLG_HCV6A|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 RPPKGKH 8
R P+G+H
Sbjct: 69 RQPQGRH 75
>sp|POLG_HCVEU|GENOME polyprotein|Hepatitis C virus genotype 6a
Query: 2 RPPKGKH 8
R P+G+H
Sbjct: 69 RQPQGRH 75
>sp|VL1_HPV33|MAJOR capsid protein L1|Human papillomavirus 33
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 163 KPPTGEH 169
>sp|POLG_HCVVO|GENOME polyprotein|Hepatitis C virus genotype 6k
Query: 2 RPPKG 6
RPP+G
Sbjct: 543 RPPRG 547
>sp|SCP_HHV8P|SMALL capsomere-interacting protein|Human herpesvirus 8 type P
Query: 1 RRPPKGK 7
R+PP GK
Sbjct: 162 RKPPSGK 168
>sp|MATRX_HENDH|MATRIX protein|Hendra virus (isolate Horse/Autralia/Hendra/1994)
Query: 1 RRPPKGKHRK 10
R P GK +K
Sbjct: 76 RSPESGKRKK 85
>sp|C_MEASA|PROTEIN C|Measles virus (strain Edmonston-AIK-C vaccine)
Query: 3 PPKGKHRK 10
PP GK R+
Sbjct: 41 PPAGKRRQ 48
>sp|C_MEASE|PROTEIN C|Measles virus (strain Edmonston) (MeV)
Query: 3 PPKGKHRK 10
PP GK R+
Sbjct: 41 PPAGKRRQ 48
>sp|VL1_HPV57|MAJOR capsid protein L1|Human papillomavirus 57
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 176 KPPIGEH 182
>sp|NCAP_VSNJO|NUCLEOPROTEIN stomatitis New Jersey virus
Query: 3 PPKGKH 8
PPKG++
Sbjct: 369 PPKGRN 374
>sp|VL1_HPV34|MAJOR capsid protein L1|Human papillomavirus type 34
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 187 KPPLGEH 193
>sp|POLS_SINDV|STRUCTURAL polyprotein|Sindbis virus (SINV)
Query: 2 RPPKGKH 8
+PP GK+
Sbjct: 518 KPPSGKN 524
>sp|POLG_HCVJ5|GENOME polyprotein|Hepatitis C virus (isolate HC-J5)
Query: 2 RPPKG 6
RPP+G
Sbjct: 545 RPPRG 549
>sp|POLG_JAEVN|GENOME polyprotein|Japanese encephalitis virus (strain Nakayama)
Query: 4 PKGKHRK 10
PK KH +
Sbjct: 972 PKSKHNR 978
>sp|ORF4_HHV8P|COMPLEMENT control protein|Human herpesvirus 8 type P
Query: 2 RPPKGKHR 9
RPP K+R
Sbjct: 513 RPPASKNR 520
>sp|POLS_SINDO|STRUCTURAL polyprotein|Sindbis virus subtype Ockelbo (strain
Query: 2 RPPKGKH 8
+PP GK+
Sbjct: 518 KPPSGKN 524
>sp|VL1_HPV2A|MAJOR capsid protein L1|Human papillomavirus type 2a
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 175 KPPIGEH 181
>sp|POLG_HCVJ7|GENOME polyprotein|Hepatitis C virus (isolate HC-J7)
Query: 2 RPPKG 6
RPP+G
Sbjct: 545 RPPRG 549
>sp|VL1_HPV03|MAJOR capsid protein L1|Human papillomavirus 3
Query: 3 PPKGKH 8
PP G+H
Sbjct: 191 PPMGEH 196
>sp|VL1_HPV16|MAJOR capsid protein L1|Human papillomavirus type 16
Query: 2 RPPKGKH 8
+PP G+H
Sbjct: 162 KPPIGEH 168
>sp|GQ1_HHV6U|GLYCOPROTEIN Q1|Human herpesvirus 6A (strain Uganda-1102)
Query: 3 PPKGKH 8
PP+ KH
Sbjct: 46 PPEDKH 51
>sp|VL1_HPV29|MAJOR capsid protein L1|Human papillomavirus 29
Query: 3 PPKGKH 8
PP G+H
Sbjct: 163 PPMGEH 168
>sp|MATRX_NIPAV|MATRIX protein|Nipah virus
Query: 1 RRPPKGKHRK 10
R P GK +K
Sbjct: 76 RTPETGKRKK 85
>sp|CVC2_HHV8P|CAPSID vertex component 2|Human herpesvirus 8 type P
Query: 3 PPKGKHR 9
PP+ HR
Sbjct: 120 PPQASHR 126
45|Sequence|221|230|GKHRKFKHTH
>sp|POL_HV2CA|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K KHTH
Sbjct: 962 GKYAKIKHTH 971
>sp|POL_HV2D1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 961 GKYAKIKNTH 970
>sp|POL_HV2G1|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 963 GKYAKIKNTH 972
>sp|POL_HV2BE|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 962 GKYAKIKNTH 971
>sp|L_BUNL8|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse (isolate Human/United
Query: 1 GKHRKFKH 8
GKH++FK+
Sbjct: 422 GKHKQFKN 429
>sp|POL_HV2SB|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 961 GKYAKIKNTH 970
>sp|L_BUNLC|RNA-DIRECTED RNA polymerase L|Bunyavirus La Crosse
Query: 1 GKHRKFKH 8
GKH++FK+
Sbjct: 422 GKHKQFKN 429
>sp|POL_HV2EH|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 960 GKYAKVKNTH 969
>sp|POL_HV2D2|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 961 GKYAKVKNTH 970
>sp|POL_HV2KR|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 962 GKYAKIKNTH 971
>sp|POL_HV2UC|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 962 GKYAKVKNTH 971
>sp|POL_HV2ST|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 962 GKYAKVKNTH 971
>sp|L_BUNYW|RNA-DIRECTED RNA polymerase L|Bunyamwera virus (BUNV)
Query: 1 GKHRKFK 7
GKH+ FK
Sbjct: 422 GKHKSFK 428
>sp|POL_HV2RO|GAG-POL polyprotein|Human immunodeficiency virus type 2
Query: 1 GKHRKFKHTH 10
GK+ K K+TH
Sbjct: 963 GKYAKVKNTH 972
>sp|VP2_POVBA|MINOR capsid protein VP2|BK polyomavirus (strain AS) (BKPyV)
Query: 1 GKHRKFKHTH 10
G H F HT+
Sbjct: 238 GTHVNFGHTY 247
>sp|NS1AB_HASV4|NON-STRUCTURAL polyprotein 1AB|Human astrovirus-4 (HAstV-4)
Query: 2 KHRKFKHTH 10
+ K+KH H
Sbjct: 1194 QREKYKHVH 1202
>sp|M2_I77AC|MATRIX protein 2|Influenza A virus (strain A/Swine/Tennessee/24/1977
Query: 3 HRKFKH 8
HR+FK+
Sbjct: 52 HRRFKY 57
>sp|DPOL_VZVO|DNA polymerase catalytic subunit|Varicella-zoster virus (strain Oka
Query: 1 GKHRKFKHTH 10
G +R+F H++
Sbjct: 27 GSNREFLHSY 36
>sp|DPOL_VZVD|DNA polymerase catalytic subunit|Varicella-zoster virus (strain
Query: 1 GKHRKFKHTH 10
G +R+F H++
Sbjct: 27 GSNREFLHSY 36
>sp|POLG_HRV3|GENOME polyprotein|Human rhinovirus 3 (HRV-3)
Query: 5 KFKHTH 10
K+K+TH
Sbjct: 212 KYKYTH 217
>sp|GP_DUGBA|ENVELOPMENT polyprotein|Dugbe virus (isolate ArD44313) (DUGV)
Query: 2 KHRKFKHT 9
+HRK HT
Sbjct: 1242 QHRKRLHT 1249
>sp|VE1_HPV70|REPLICATION protein E1|Human papillomavirus type 70
Query: 5 KFKHTH 10
+FKHT+
Sbjct: 212 QFKHTY 217
>sp|POXIN_CWPXB|POXIN-SCHLAFEN virus (strain Brighton Red)
Query: 1 GKHRKFKHTH 10
GK R + H H
Sbjct: 261 GKERCYVHMH 270
46|Sequence|226|235|FKHTHDKTAL
>sp|VL2_HPV5B|MINOR capsid protein L2|Human papillomavirus type 5b
Query: 3 HTHDKTA 9
HTHD T
Sbjct: 494 HTHDNTG 500
>sp|VL2_HPV36|MINOR capsid protein L2|Human papillomavirus 36
Query: 3 HTHDKTA 9
HTHD T
Sbjct: 494 HTHDNTG 500
>sp|POLS_EEVV8|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FKHTHDK 7
FK+TH+K
Sbjct: 189 FKYTHEK 195
>sp|POLS_EEVV3|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FKHTHDK 7
FK+TH+K
Sbjct: 189 FKYTHEK 195
>sp|POLS_EEVVE|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FKHTHDK 7
FK+TH+K
Sbjct: 188 FKYTHEK 194
>sp|POLS_EEVVP|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FKHTHDK 7
FK+TH+K
Sbjct: 189 FKYTHEK 195
>sp|POLS_EEVVT|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FKHTHDK 7
FK+TH+K
Sbjct: 189 FKYTHEK 195
>sp|POLS_EEVVM|STRUCTURAL polyprotein|Venezuelan equine encephalitis virus (strain
Query: 1 FKHTHDK 7
FK+TH+K
Sbjct: 188 FKYTHEK 194
>sp|NRAM_I74A1|NEURAMINIDASE A virus (strain A/Equine/Cor/16/1974
Query: 4 THDKTAL 10
THD+TA
Sbjct: 146 THDRTAF 152
>sp|NRAM_I56A3|NEURAMINIDASE A virus (strain A/Equine/Prague/1/1956
Query: 4 THDKTAL 10
THD+TA
Sbjct: 146 THDRTAF 152
>sp|TRM3_EBVG|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain GD1) (HHV-4)
Query: 1 FKHTHDKTA 9
F HT DKT+
Sbjct: 580 FVHTKDKTS 588
>sp|TRM3_EBVB9|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain B95-8) (HHV-4)
Query: 1 FKHTHDKTA 9
F HT DKT+
Sbjct: 580 FVHTKDKTS 588
>sp|TRM3_EBVA8|TRIPARTITE terminase subunit 3|Epstein-Barr virus (strain AG876) (HHV-4)
Query: 1 FKHTHDKTA 9
F HT DKT+
Sbjct: 580 FVHTKDKTS 588
>sp|POLG_EC06C|GENOME polyprotein|Echovirus 6 (strain Charles)
Query: 1 FKHTHDKT 8
F+H +D+T
Sbjct: 789 FRHVNDRT 796
>sp|ITP_VZVD|INNER tegument protein|Varicella-zoster virus (strain Dumas) (HHV-3)
Query: 1 FKHTHDKTA 9
FK TH++++
Sbjct: 509 FKQTHNQSS 517
>sp|NRAM_I80A2|NEURAMINIDASE A virus (strain A/Seal/Massachusetts/1/1980
Query: 5 HDKTAL 10
HD+TAL
Sbjct: 148 HDRTAL 153
>sp|POLN_WEEV|POLYPROTEIN P1234|Western equine encephalitis virus (WEEV)
Query: 3 HTHDKTAL 10
HTHD+ L
Sbjct: 1302 HTHDQDRL 1309
>sp|POLG_HPE2W|GENOME polyprotein|Human parechovirus 2 (strain Williamson)
Query: 1 FKHTHDKT 8
F H HD T
Sbjct: 619 FAHVHDFT 626
>sp|DPOL_HCMVM|DNA polymerase catalytic subunit|Human cytomegalovirus (strain Merlin)
Query: 3 HTHDKT 8
HT+D+T
Sbjct: 102 HTYDQT 107
>sp|DPOL_HCMVA|DNA polymerase catalytic subunit|Human cytomegalovirus (strain AD169)
Query: 3 HTHDKT 8
HT+D+T
Sbjct: 102 HTYDQT 107
47|Sequence|231|241|DKTALKETLGA
>sp|HELI_HHV2H|DNA replication helicase|Human herpesvirus 2 (strain HG52)
Query: 3 TALKETLG 10
TAL++TLG
Sbjct: 212 TALEQTLG 219
>sp|AN_HHV6Z|ALKALINE nuclease|Human herpesvirus 6B (strain Z29)
Query: 2 KTALKETLG 10
K +KETLG
Sbjct: 190 KREVKETLG 198
>sp|AN_HHV6U|ALKALINE nuclease|Human herpesvirus 6A (strain Uganda-1102)
Query: 2 KTALKETLG 10
K +KETLG
Sbjct: 190 KREVKETLG 198
>sp|POLG_HCVNZ|GENOME polyprotein|Hepatitis C virus genotype 3a
Query: 2 KTALKE 7
KTALKE
Sbjct: 2495 KTALKE 2500