PDGFB_HUMAN Blast Output
Archaea
1|Sequence|1|10|MNRCWALFLS

>sp|SYA_METAR|ALANINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MNRCWAL 7
+ RCW+L
Sbjct: 372 LRRCWSL 378


>sp|PPSA_STAMF|PROBABLE phosphoenolpyruvate synthase|Staphylothermus marinus (strain ATCC

Query: 1 MNRCWA-LFLS 10
+ RCWA LF S
Sbjct: 161 VKRCWASLFTS 171


>sp|PPSA_PYRFU|PHOSPHOENOLPYRUVATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MNRCWA 6
+ RCWA
Sbjct: 186 VKRCWA 191


>sp|PPSA_PYRAB|PROBABLE phosphoenolpyruvate synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 MNRCWA 6
+ RCWA
Sbjct: 186 VKRCWA 191


>sp|PPSA_METTH|PROBABLE phosphoenolpyruvate synthase|Methanothermobacter thermautotrophicus

Query: 1 MNRCWA 6
+ RCWA
Sbjct: 181 VRRCWA 186


>sp|NADM_SACS2|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 MNRCWALFLS 10
MN WA ++S
Sbjct: 81 MNNIWAHYVS 90




2|Sequence|6|15|ALFLSLCCYL

>sp|NNR_METJA|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanocaldococcus jannaschii

Query: 3 FLSLCC 8
FLS CC
Sbjct: 449 FLSACC 454


>sp|Y1653_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 4 LSLCCY 9
L +CCY
Sbjct: 217 LDICCY 222


>sp|Y1649_METJA|PUTATIVE ribosomal RNA large subunit|Methanocaldococcus jannaschii (strain

Query: 4 LSLCCY 9
L +CCY
Sbjct: 218 LDICCY 223


>sp|RGYR1_SULTO|REVERSE gyrase 1|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 FLSLCC 8
FLS CC
Sbjct: 1097 FLSSCC 1102


>sp|Y1285_METJA|UNCHARACTERIZED protein MJ1285|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ALFLSLCCYL 10
A+FL +C Y+
Sbjct: 10 AMFLIVCVYV 19


>sp|CSD_PYRAB|PROBABLE cysteine desulfurase|Pyrococcus abyssi (strain GE5 /

Query: 4 LSLCCY 9
+ LCCY
Sbjct: 250 VELCCY 255




3|Sequence|11|20|LCCYLRLVSA

>sp|AMPD_METMA|ANHYDROMEVALONATE phosphate decarboxylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CCYLRLV 8
CCYL V
Sbjct: 313 CCYLHAV 319


>sp|CBID_METM6|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 LCCYLRLVS 9
LC Y LVS
Sbjct: 289 LCAYASLVS 297




4|Sequence|16|25|RLVSAEGDPI

>sp|DHQS_METVS|3-DEHYDROQUINATE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 RLVSAEGDPI 10
RLVS EG PI
Sbjct: 319 RLVSDEGKPI 328


>sp|DHQS_METJA|3-DEHYDROQUINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RLVSAEGDPI 10
RLV+ +G+PI
Sbjct: 319 RLVNEKGEPI 328


>sp|F16PA_METHJ|FRUCTOSE-1,6-BISPHOSPHATASE class 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RLVSAEGDPI 10
RL+S + DPI
Sbjct: 33 RLISRQMDPI 42


>sp|SYT_THEPD|THREONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 RLVSAEGDPI 10
RLV EG P+
Sbjct: 388 RLVEMEGKPV 397


>sp|TMCA_PYRFU|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus furiosus (strain ATCC

Query: 5 AEGDPI 10
AEGDPI
Sbjct: 441 AEGDPI 446


>sp|TMCA_PYRAB|TRNA(MET) cytidine acetyltransferase TmcA|Pyrococcus abyssi (strain GE5 /

Query: 5 AEGDPI 10
AEGDPI
Sbjct: 441 AEGDPI 446


>sp|CBIT_PYRAE|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 RLVSAEGDPI 10
RL+ AEGD +
Sbjct: 93 RLIVAEGDAL 102


>sp|DHQS_METST|3-DEHYDROQUINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 RLVSAEGDPI 10
RLV+ +G+PI
Sbjct: 317 RLVNDKGEPI 326


>sp|FEN_AERPE|FLAP endonuclease 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLVSAEGDPI 10
RLV + GDP+
Sbjct: 255 RLVKSLGDPM 264


>sp|KADA_SULAC|ADENYLATE kinase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 LVSAEGDP 9
+V+ EGDP
Sbjct: 175 IVNVEGDP 182


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 RLVSAEGDPI 10
+LVS +G PI
Sbjct: 320 KLVSHDGTPI 329


>sp|DHQS_METTH|3-DEHYDROQUINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 RLVSAEGDPI 10
RLV+ +G+P+
Sbjct: 332 RLVNDKGEPV 341


>sp|FLPA_METMA|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei (strain

Query: 1 RLVSAEGD 8
+L+S EGD
Sbjct: 36 KLISVEGD 43


>sp|FLPA_METMZ|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina mazei

Query: 1 RLVSAEGD 8
+L+S EGD
Sbjct: 36 KLISVEGD 43




5|Sequence|21|30|EGDPIPEELY

>sp|ARLY_METAC|ARGININOSUCCINATE lyase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 EGDPIPEEL 9
EG P PEE+
Sbjct: 441 EGGPAPEEM 449


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GDPIPEELY 10
G+PIPEE +
Sbjct: 87 GEPIPEEKF 95


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 DPIPEELY 10
D IPEELY
Sbjct: 654 DAIPEELY 661


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 359 GDPVPLMLY 367


>sp|ACDB2_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 3 DPIPEELY 10
D IPEELY
Sbjct: 361 DAIPEELY 368


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 EGDPIPEELY 10
EG IPE+LY
Sbjct: 113 EGGEIPEKLY 122


>sp|APGM_SACS2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus solfataricus (strain ATCC

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPVLLY 368


>sp|APGM_SULAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 359 GDPVPFLLY 367


>sp|APGM_SACI6|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPILLY 368


>sp|APGM_SACI4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPILLY 368


>sp|APGM_SACI3|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain M.16.27)

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPILLY 368


>sp|APGM_SACI1|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPILLY 368


>sp|Y4020_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 EGDPIPEELY 10
E D IPEE++
Sbjct: 260 EADGIPEEIF 269


>sp|APGM_SACI7|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPILLY 368


>sp|APGM_SACI2|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 360 GDPVPILLY 368


>sp|PSTK_METKA|L-SERYL-TRNA(SEC) kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 GDPIPEEL 9
G+PIPEE+
Sbjct: 121 GEPIPEEV 128


>sp|APGM_IGNH4|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 363 GDPVPVLLY 371


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PIPEELY 10
P PEE+Y
Sbjct: 336 PTPEEVY 342


>sp|PCKG_THEAC|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DPIPEELY 10
DP+ EELY
Sbjct: 349 DPLQEELY 356


>sp|APGM_SULTO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 GDPIPEELY 10
GDP+P LY
Sbjct: 359 GDPVPFLLY 367


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 PIPEELY 10
P PEE+Y
Sbjct: 336 PTPEEVY 342


>sp|G6PI_THELI|GLUCOSE-6-PHOSPHATE isomerase|Thermococcus litoralis

Query: 1 EGDPIPEELY 10
EGDP+ E+Y
Sbjct: 47 EGDPVVYEVY 56


>sp|AROE_THEVO|SHIKIMATE dehydrogenase (NADP(+))|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDPIPE 7
GDP PE
Sbjct: 191 GDPFPE 196


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 PIPEELY 10
P PEE+Y
Sbjct: 336 PTPEEVY 342


>sp|SECD_THEGJ|PROTEIN-EXPORT membrane protein SecD|Thermococcus gammatolerans (strain DSM 15229

Query: 5 IPEELY 10
+PEELY
Sbjct: 257 VPEELY 262


>sp|AROC_HALSA|CHORISMATE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 EGDPIP 6
EGDPIP
Sbjct: 282 EGDPIP 287


>sp|Y540_ARCFU|UNCHARACTERIZED protein AF_0540|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EGDPIPEE 8
E DP PEE
Sbjct: 83 EKDPNPEE 90


>sp|ARLY_METBF|ARGININOSUCCINATE lyase|Methanosarcina barkeri (strain Fusaro /

Query: 2 GDPIPEEL 9
G P PEE+
Sbjct: 442 GGPAPEEM 449


>sp|PCKG_PYRFU|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus furiosus (strain ATCC 43587

Query: 3 DPIPEELY 10
D IPEEL+
Sbjct: 589 DNIPEELF 596


>sp|ARLY_METMA|ARGININOSUCCINATE lyase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDPIPEEL 9
G P PEE+
Sbjct: 442 GGPAPEEM 449


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 DPIPEELY 10
D IPEEL+
Sbjct: 584 DNIPEELF 591


>sp|RRP4_AERPE|EXOSOME complex component Rrp4|Aeropyrum pernix (strain ATCC 700893

Query: 2 GDPIPEEL 9
G+P+PEE+
Sbjct: 15 GEPLPEEV 22


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 EGDPIP 6
EGDP+P
Sbjct: 283 EGDPVP 288


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 3 DPIPEELY 10
+P+P+E+Y
Sbjct: 492 EPMPDEIY 499


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 EGDPIPEEL 9
E DP+ EEL
Sbjct: 850 EPDPVVEEL 858


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 GDPIPEE 8
G+P+P+E
Sbjct: 166 GEPLPQE 172


>sp|RL10_SULTO|LARGE ribosomal subunit protein uL10|Sulfurisphaera tokodaii (strain DSM

Query: 2 GDPIPEE 8
GDPIP +
Sbjct: 166 GDPIPPD 172


>sp|MTMB_METMA|MONOMETHYLAMINE methyltransferase MtmB|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GDPIPEELY 10
G PI EE++
Sbjct: 132 GSPISEEVF 140


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 1 EGDPIPEEL 9
+GDP P+ L
Sbjct: 180 DGDPYPDLL 188


>sp|APGM_THEAC|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 GDPIPEELY 10
GDP+P Y
Sbjct: 351 GDPVPIVFY 359


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 DPIPEELY 10
D +PEEL+
Sbjct: 587 DNVPEELF 594


>sp|NPD2_PYRAE|NAD-DEPENDENT protein deacylase 2|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GDPIPEELY 10
G+P+P+E +
Sbjct: 157 GEPLPQEAW 165


>sp|Y194_PYRAB|UPF0146 protein PYRAB01940|Pyrococcus abyssi (strain GE5 /

Query: 2 GDPIPEEL 9
GDP+P+ +
Sbjct: 109 GDPVPQGM 116


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 GDPIPEELY 10
GD IPE Y
Sbjct: 401 GDMIPETAY 409


>sp|APGM_THEVO|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GDPIPEELY 10
GDP+P Y
Sbjct: 353 GDPVPIVFY 361


>sp|RS15_IGNH4|SMALL ribosomal subunit protein uS15|Ignicoccus hospitalis (strain

Query: 4 PIPEELY 10
PIPE+L+
Sbjct: 81 PIPEDLF 87


>sp|PCKG_THEVO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DPIPEELY 10
DP+ +ELY
Sbjct: 349 DPVYDELY 356




6|Sequence|26|35|PEELYEMLSD

>sp|ISF2_ARCFU|IRON-SULFUR flavoprotein AF_1519|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 ELYEMLSD 10
ELYEML D
Sbjct: 65 ELYEMLKD 72


>sp|LHRC_SULAC|ATP-DEPENDENT helicase Lhr-Core|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PEELYEMLSD 10
P+++YE+LSD
Sbjct: 718 PDKMYEILSD 727


>sp|FBPAP_IGNH4|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 PEELYEMLS 9
PEELY++L+
Sbjct: 185 PEELYDLLA 193


>sp|MFNA_PYRFU|PROBABLE L-aspartate decarboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 EELYEMLSD 10
EE+ EMLSD
Sbjct: 70 EEVIEMLSD 78


>sp|LEU1_PYRFU|2-ISOPROPYLMALATE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 PEELYEML 8
PEE YE++
Sbjct: 177 PEEFYELI 184


>sp|LHRC2_THEBM|ATP-DEPENDENT helicase Lhr-Core protein 2|Thermococcus barophilus (strain DSM

Query: 2 EELYEMLSD 10
EE+YE+L+D
Sbjct: 12 EEIYEILAD 20


>sp|MFNA_PYRAB|PROBABLE L-aspartate decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 EELYEMLSD 10
EE+ EMLSD
Sbjct: 71 EEVIEMLSD 79


>sp|FBPAP_THEKO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PEELYEMLS 9
PEELY++L+
Sbjct: 187 PEELYDLLA 195


>sp|ADHS_METTH|2-AMINO-3,7-DIDEOXY-D-THREO-HEPT-6-ULOSONATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 EELYEMLSD 10
EEL +M+SD
Sbjct: 209 EELLQMVSD 217


>sp|LEU1_PYRAB|2-ISOPROPYLMALATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 PEELYEML 8
PEE YE++
Sbjct: 176 PEEFYELV 183


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 PEELYEM 7
P+ELYEM
Sbjct: 255 PKELYEM 261


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 PEELYEM 7
P+ELYEM
Sbjct: 255 PKELYEM 261


>sp|MFNA_PYRHO|L-ASPARTATE/L-GLUTAMATE decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EELYEMLSD 10
EE+ EM+SD
Sbjct: 70 EEVIEMISD 78


>sp|TMCA_METKA|TRNA(MET) cytidine acetyltransferase TmcA|Methanopyrus kandleri (strain AV19

Query: 1 PEELYEMLS 9
PEELY M +
Sbjct: 248 PEELYRMCA 256


>sp|DNAJ_THEVO|CHAPERONE protein DnaJ|Thermoplasma volcanium (strain ATCC 51530

Query: 3 ELYEMLSD 10
E YE+LSD
Sbjct: 52 EAYEVLSD 59


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 ELYEMLSD 10
E YE+LSD
Sbjct: 52 EAYEVLSD 59


>sp|THIC_METHJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PEELYE 6
PEE+YE
Sbjct: 338 PEEVYE 343


>sp|PURP_KORCO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 PEELYEMLSD 10
PEE YE S+
Sbjct: 174 PEEFYEKFSE 183


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PEELYEMLSD 10
P+EL+E L D
Sbjct: 543 PDELFEKLED 552


>sp|HIS6_METTH|IMIDAZOLE glycerol phosphate synthase subunit|Methanothermobacter

Query: 1 PEELYEMLSD 10
PE +YE +D
Sbjct: 230 PEHIYEAFTD 239


>sp|DNAJ_PICTO|CHAPERONE protein DnaJ|Picrophilus torridus (strain ATCC 700027

Query: 3 ELYEMLSD 10
E YE+LSD
Sbjct: 51 EAYEVLSD 58


>sp|FBPAP_THEON|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Thermococcus onnurineus (strain NA1)

Query: 1 PEELYEMLS 9
PEE+Y++L+
Sbjct: 187 PEEIYDLLA 195


>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EELYEMLSD 10
EELY LSD
Sbjct: 691 EELYSRLSD 699


>sp|THIC_METB6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 PEELYE 6
PEE+YE
Sbjct: 338 PEEVYE 343


>sp|HTR18_HALS3|TRANSDUCER protein Htr18|Halobacterium salinarum (strain ATCC 29341

Query: 3 ELYEMLSD 10
+LYE+LSD
Sbjct: 771 DLYELLSD 778


>sp|THIC_METLZ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PEELYE 6
PEE+YE
Sbjct: 338 PEEVYE 343


>sp|DNLI_SULTO|DNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PEELYEM 7
P+E+YEM
Sbjct: 577 PKEIYEM 583


>sp|RFCS_NATPD|REPLICATION factor C small subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PEELYEMLSD 10
PEE+ EM+++
Sbjct: 234 PEEIREMVTE 243


>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PEELYEMLS 9
P+E+Y++L+
Sbjct: 183 PQEIYDLLA 191


>sp|THIC_METMJ|PHOSPHOMETHYLPYRIMIDINE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 PEELYE 6
PEE+YE
Sbjct: 338 PEEVYE 343


>sp|Y031_METPE|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaerula

Query: 1 PEELYEMLSD 10
PE LY+ L D
Sbjct: 101 PETLYDYLVD 110


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 PEELYEMLS 9
PE+ Y+ML+
Sbjct: 518 PEKTYQMLT 526


>sp|ASPD_NITMS|L-ASPARTATE dehydrogenase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EELYEMLSD 10
E +Y++LSD
Sbjct: 102 ESIYDILSD 110


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 PEELYEMLS 9
PE+ YEML
Sbjct: 519 PEKQYEMLK 527


>sp|PIMT_METVS|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 1 PEELYEMLSD 10
PE L+E L+D
Sbjct: 159 PEILFEQLND 168


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus kandleri

Query: 1 PEELYEMLSD 10
PEE Y L+D
Sbjct: 506 PEETYSKLAD 515


>sp|KAD6_PYRAE|PUTATIVE adenylate kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 PEELYEML 8
PEE +E+L
Sbjct: 149 PEETFELL 156


>sp|TRM56_THEKO|TRNA (cytidine(56)-2'-O)-methyltransferase|Thermococcus kodakarensis

Query: 1 PEELYEM 7
P E+YEM
Sbjct: 119 PREVYEM 125


>sp|FBPAP_METTM|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Methanothermobacter marburgensis (strain ATCC

Query: 1 PEELYEMLS 9
P+E+Y++L+
Sbjct: 183 PDEMYDLLA 191


>sp|ASSY_HALWD|ARGININOSUCCINATE synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 PEELYEMLSD 10
PE++YE +D
Sbjct: 193 PEDVYEWTAD 202


>sp|PAN_METHJ|PROTEASOME-ACTIVATING nucleotidase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PEELYEMLSD 10
P+ELY L D
Sbjct: 14 PDELYRYLVD 23


>sp|COFH_HALSA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Halobacterium salinarum (strain ATCC

Query: 2 EELYEMLSD 10
+E+YE L+D
Sbjct: 213 DEVYETLAD 221


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 PEELYEMLSD 10
P+ L+E L+D
Sbjct: 159 PKALFEQLND 168


>sp|EF1B_THEPD|ELONGATION factor 1-beta|Thermofilum pendens (strain DSM 2475

Query: 1 PEELYEMLS 9
PEELY+ ++
Sbjct: 19 PEELYKKIA 27


>sp|SUCC_PYRAE|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum aerophilum (strain

Query: 1 PEELYEM 7
PEE YE+
Sbjct: 65 PEEAYEL 71


>sp|PIMT_METM7|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 PEELYEMLSD 10
P+ L+E L+D
Sbjct: 159 PKALFEQLND 168


>sp|FLPA_SULTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfurisphaera tokodaii (strain

Query: 1 PEELYEM 7
P E+YEM
Sbjct: 192 PTEIYEM 198


>sp|ACDB1_METJA|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanocaldococcus

Query: 1 PEELYEMLS 9
PEELY+ ++
Sbjct: 657 PEELYDKIA 665




7|Sequence|31|40|EMLSDHSIRS

>sp|AROC_METS5|CHORISMATE synthase|Metallosphaera sedula (strain ATCC 51363

Query: 3 LSDHSIRS 10
L DHS+RS
Sbjct: 348 LVDHSLRS 355


>sp|AROC_METS3|CHORISMATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 MLSDHSIRS 10
+L+DH IRS
Sbjct: 346 VLADHMIRS 354


>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 2 MLSDHSI 8
MLSDH I
Sbjct: 675 MLSDHGI 681


>sp|AROC_METAC|CHORISMATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 MLSDHSIRS 10
+LSDH +RS
Sbjct: 347 VLSDHMLRS 355


>sp|PYRE_HALVD|OROTATE phosphoribosyltransferase|Haloferax volcanii (strain ATCC 29605

Query: 1 EMLSDHSI 8
E+L+DH I
Sbjct: 152 ELLADHDI 159




8|Sequence|36|45|HSIRSFDDLQ

>sp|NAOX_METJA|NADH oxidase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SIRSFDDL 9
+I+SFDD+
Sbjct: 51 AIKSFDDI 58


>sp|Y761_METJA|UNCHARACTERIZED metal-dependent hydrolase MJ0761|Methanocaldococcus jannaschii

Query: 3 IRSFDDLQ 10
+RSF+DL+
Sbjct: 10 VRSFEDLE 17


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 IRSFDD 8
+RSFDD
Sbjct: 811 VRSFDD 816


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 IRSFDD 8
+RSFDD
Sbjct: 812 VRSFDD 817


>sp|TYSY_METKA|PUTATIVE thymidylate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 HSIRSFDD 8
HS+R+++D
Sbjct: 69 HSVRAYED 76


>sp|PYRDB_ARCFU|DIHYDROOROTATE dehydrogenase B (NAD(+)), catalytic|Archaeoglobus fulgidus (strain

Query: 1 HSIRSFDDL 9
HS+ F DL
Sbjct: 100 HSVEEFSDL 108


>sp|MTBA_METMA|METHYLCOBAMIDE:COM methyltransferase MtbA|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 HSIRSFDDL 9
HS+++ +DL
Sbjct: 100 HSVKNLEDL 108


>sp|DP2S_METJA|DNA polymerase II small subunit|Methanocaldococcus jannaschii (strain

Query: 4 RSFDDL 9
RSFDDL
Sbjct: 468 RSFDDL 473


>sp|DPCKG_PICTO|GTP-DEPENDENT dephospho-CoA kinase|Picrophilus torridus (strain ATCC 700027

Query: 1 HSIRSFDDLQ 10
HSI S DD++
Sbjct: 24 HSICSIDDIK 33




9|Sequence|41|50|FDDLQRLLHG

>sp|AROA_THEKO|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 FDDLQRLL 8
FDDL+RLL
Sbjct: 391 FDDLRRLL 398


>sp|COFD_HALMA|2-PHOSPHO-L-LACTATE transferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 DDLQRLLH 9
DD+QR LH
Sbjct: 235 DDIQRALH 242


>sp|SEPS_METVS|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 DDLQRLLHG 10
+ LQ++LHG
Sbjct: 126 ESLQKILHG 134


>sp|SEPS_METMP|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 2 DDLQRLLHG 10
+ LQ++LHG
Sbjct: 126 ESLQKILHG 134


>sp|SEPS_METM7|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C7 /

Query: 2 DDLQRLLHG 10
+ LQ++LHG
Sbjct: 126 ESLQKILHG 134


>sp|SEPS_METM6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C6 /

Query: 2 DDLQRLLHG 10
+ LQ++LHG
Sbjct: 126 ESLQKILHG 134


>sp|SEPS_METM5|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanococcus maripaludis (strain C5 /

Query: 2 DDLQRLLHG 10
+ LQ++LHG
Sbjct: 126 ESLQKILHG 134


>sp|GGR_METTP|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DDLQRLLH 9
DDL +L+H
Sbjct: 349 DDLNKLMH 356


>sp|GATB_METST|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 2 DDLQRLLH 9
D+L+R+LH
Sbjct: 323 DELKRVLH 330


>sp|DPHB_METKA|DIPHTHINE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 DLQRLLHG 10
DL+RLL+G
Sbjct: 46 DLKRLLNG 53


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 DDLQRLLHG 10
+DL+RLL G
Sbjct: 4 EDLERLLLG 12


>sp|ALADH_ARCFU|ALANINE dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DDLQRLLHG 10
DDL++ HG
Sbjct: 239 DDLEQAKHG 247


>sp|SYH_PICTO|HISTIDINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 DDLQRLLHG 10
+D++RLL+G
Sbjct: 222 NDVERLLNG 230


>sp|HIS2_HALWD|PHOSPHORIBOSYL-ATP pyrophosphatase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FDDLQRLLHG 10
DDL+ LHG
Sbjct: 89 LDDLREELHG 98




10|Sequence|46|55|RLLHGDPGEE

>sp|RS19_METST|SMALL ribosomal subunit protein uS19|Methanosphaera stadtmanae (strain

Query: 1 RLLHGDPG 8
R+ HGDPG
Sbjct: 116 RVQHGDPG 123


>sp|Y735_METS5|UPF0284 protein Msed_0735|Metallosphaera sedula (strain ATCC 51363

Query: 3 LHGDPGEE 10
LHG+PG +
Sbjct: 110 LHGEPGRD 117


>sp|RFCL_SACS2|REPLICATION factor C large subunit|Saccharolobus solfataricus (strain ATCC

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|TRPD_SACI7|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI6|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI4|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.14.25

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI3|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain M.16.27)

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI2|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_SACI1|ANTHRANILATE phosphoribosyltransferase|Saccharolobus islandicus (strain

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|RFCL_SACI6|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.4 /

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|RFCL_SACI4|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.14.25 /

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|RFCL_SACI3|REPLICATION factor C large subunit|Saccharolobus islandicus (strain M.16.27)

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|RFCL_SACI1|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|RFCL_SACI7|REPLICATION factor C large subunit|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|RFCL_SACI2|REPLICATION factor C large subunit|Saccharolobus islandicus (strain L.S.2.15

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 44 LLHGPPG 50


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 LLHGDPG 8
+L+GDPG
Sbjct: 43 ILYGDPG 49


>sp|TRPD_AERPE|ANTHRANILATE phosphoribosyltransferase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLHGDPG 8
++HGDPG
Sbjct: 224 VVHGDPG 230


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 1 RLLHGDPGEE 10
++ HGDP E
Sbjct: 270 KIWHGDPNHE 279


>sp|BRIX_METMA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina mazei

Query: 4 HGDPGE 9
HG+PGE
Sbjct: 55 HGNPGE 60


>sp|TRPD_METS5|ANTHRANILATE phosphoribosyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 215 LVHGEPG 221


>sp|TRPD_CALMQ|ANTHRANILATE phosphoribosyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 2 LLHGDPG 8
L+HG+PG
Sbjct: 216 LVHGEPG 222


>sp|BRIX_METBF|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 4 HGDPGE 9
HG+PGE
Sbjct: 55 HGNPGE 60


>sp|DPCKG_METPE|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaerula palustris (strain ATCC

Query: 2 LLHGDPGE 9
LL+G PGE
Sbjct: 129 LLYGQPGE 136


>sp|RS3_THEPD|SMALL ribosomal subunit protein uS3|Thermofilum pendens (strain DSM 2475

Query: 5 GDPGEE 10
G+PGEE
Sbjct: 156 GEPGEE 161


>sp|RS19_METS3|SMALL ribosomal subunit protein uS19|Methanobrevibacter smithii (strain

Query: 1 RLLHGDPG 8
++ HGDPG
Sbjct: 116 KVQHGDPG 123


>sp|RS19_STAMF|SMALL ribosomal subunit protein uS19|Staphylothermus marinus (strain ATCC

Query: 1 RLLHGDPG 8
R+ HG+PG
Sbjct: 123 RVQHGEPG 130


>sp|RFCL_METKA|REPLICATION factor C large subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 45 LLHGPPG 51


>sp|Y104_METJA|UNCHARACTERIZED ATP-dependent helicase MJ0104|Methanocaldococcus jannaschii (strain

Query: 2 LLHGDPG 8
L+HG PG
Sbjct: 204 LIHGPPG 210


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LLHGDPGEE 10
+L+GDP E
Sbjct: 741 ILYGDPSNE 749


>sp|PAN_METPE|PROTEASOME-ACTIVATING nucleotidase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 191 LLHGPPG 197


>sp|PYRK_METAR|PROBABLE dihydroorotate dehydrogenase B (NAD(+)),|Methanocella arvoryzae

Query: 3 LHGDPGE 9
LHG PG+
Sbjct: 29 LHGKPGQ 35


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 3 LHGDPGE 9
+HG+PGE
Sbjct: 195 VHGEPGE 201


>sp|COBS_HALSA|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLHGDPGE 9
++HGDP +
Sbjct: 39 VVHGDPAD 46


>sp|PAN_AERPE|PROTEASOME-ACTIVATING nucleotidase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 177 LLHGPPG 183


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 227 LLHGPPG 233


>sp|PAN2_HALSA|PROTEASOME-ACTIVATING nucleotidase 2|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 190 LLHGPPG 196


>sp|PAN1_HALSA|PROTEASOME-ACTIVATING nucleotidase 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 LLHGDPG 8
LLHG PG
Sbjct: 186 LLHGPPG 192


>sp|BRIX_METAC|PROBABLE Brix domain-containing ribosomal biogenesis|Methanosarcina

Query: 4 HGDPGE 9
HG+PGE
Sbjct: 55 HGNPGE 60


>sp|RS19_METTH|SMALL ribosomal subunit protein uS19|Methanothermobacter

Query: 4 HGDPG 8
HGDPG
Sbjct: 119 HGDPG 123


>sp|SRP54_META3|SIGNAL recognition particle 54 kDa|Methanococcus aeolicus (strain ATCC

Query: 3 LHGDP 7
LHGDP
Sbjct: 158 LHGDP 162


>sp|RNJL_SACS2|RNASE aCSPSF2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 LLHGDPGEE 10
L+HG P E
Sbjct: 458 LVHGSPDNE 466


>sp|PSA_AERPE|PROTEASOME subunit alpha|Aeropyrum pernix (strain ATCC 700893

Query: 1 RLLHGDP 7
RLL+G+P
Sbjct: 104 RLLYGEP 110


>sp|DPCKG_METHJ|GTP-DEPENDENT dephospho-CoA kinase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LLHGDPGE 9
+L+G PGE
Sbjct: 129 ILYGQPGE 136


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 LLHGDPG 8
+LHG PG
Sbjct: 41 VLHGSPG 47


>sp|TRPD_SULAC|ANTHRANILATE phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 2 LLHGDPG 8
+ HG+PG
Sbjct: 210 IYHGEPG 216


>sp|PIP_SACS2|PROLINE iminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 LHGDPG 8
LHG PG
Sbjct: 44 LHGGPG 49


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LLHGDPG 8
+LHG PG
Sbjct: 41 VLHGAPG 47


>sp|PAN2_METTM|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter marburgensis (strain ATCC

Query: 2 LLHGDPG 8
L HG PG
Sbjct: 161 LFHGSPG 167


>sp|SYV_HALSA|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 RLLHGDPGE 9
RL +G PGE
Sbjct: 658 RLYNGRPGE 666


>sp|SYV_HALS3|VALINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 1 RLLHGDPGE 9
RL +G PGE
Sbjct: 658 RLYNGRPGE 666


>sp|DPCKG_ARCFU|GTP-DEPENDENT dephospho-CoA kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LLHGDPGE 9
+L+G PGE
Sbjct: 141 ILYGQPGE 148


>sp|RFCL_NATPD|REPLICATION factor C large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 2 LLHGDPG 8
+LHG PG
Sbjct: 41 ILHGSPG 47


>sp|PAN2_METTH|PROTEASOME-ACTIVATING nucleotidase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 LLHGDPG 8
L HG PG
Sbjct: 161 LFHGSPG 167


>sp|RS19_THESM|SMALL ribosomal subunit protein uS19|Thermococcus sibiricus (strain DSM

Query: 1 RLLHGDPG 8
R+ HG PG
Sbjct: 113 RVQHGSPG 120


>sp|SYL_METBF|LEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 LHGDPGE 9
LHG PG+
Sbjct: 106 LHGIPGD 112


>sp|SYL_METAC|LEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 LHGDPGE 9
LHG PG+
Sbjct: 106 LHGIPGD 112


>sp|PIP_THEVO|PROLINE iminopeptidase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 LHGDPG 8
LHG PG
Sbjct: 36 LHGGPG 41


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 5 GDPGEE 10
GDPGE+
Sbjct: 160 GDPGEK 165


>sp|SYL_METMA|LEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 LHGDPGE 9
LHG PG+
Sbjct: 106 LHGIPGD 112


>sp|SYE_PYRNV|GLUTAMATE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RLLHGDPGE 9
R+L GD GE
Sbjct: 234 RMLRGDFGE 242


>sp|CFBD_METAC|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina acetivorans

Query: 2 LLHGDPG 8
+LHG PG
Sbjct: 32 ILHGPPG 38




11|Sequence|51|60|DPGEEDGAEL

>sp|Y065_METJA|UNCHARACTERIZED protein MJ0065|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PGEEDG 7
PGEEDG
Sbjct: 109 PGEEDG 114


>sp|SRP54_THEGJ|SIGNAL recognition particle 54 kDa|Thermococcus gammatolerans (strain DSM

Query: 1 DPGEEDGAEL 10
DPGE+D +L
Sbjct: 161 DPGEKDAIKL 170


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DPGEEDGAE 9
DP EED E
Sbjct: 1698 DPNEEDNWE 1706


>sp|GATD_THEPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Thermofilum pendens (strain DSM 2475

Query: 2 PGEEDGAE 9
PGEE+G++
Sbjct: 84 PGEEEGSQ 91


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 PGEEDGAEL 10
PGE DG E+
Sbjct: 162 PGEHDGREV 170


>sp|MCRAM_METJA|[METHYL coenzyme M reductase]-L-arginine

Query: 2 PGEEDGAEL 10
PG DG EL
Sbjct: 185 PGVNDGEEL 193




12|Sequence|56|65|DGAELDLNMT

>sp|PYRG_SULTO|CTP synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 DGAELDLNM 9
DGAE DL++
Sbjct: 64 DGAETDLDL 72


>sp|PYRG_SULAC|CTP synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 DGAELDLNM 9
DGAE DL++
Sbjct: 64 DGAETDLDL 72


>sp|PYRG_SACS2|CTP synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DGAELDLNM 9
DGAE DL++
Sbjct: 65 DGAETDLDL 73


>sp|PYRG_METPE|CTP synthase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 DGAELDLNM 9
DG+E+DL++
Sbjct: 63 DGSEVDLDL 71


>sp|PYRG_THEVO|CTP synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DGAELDLNM 9
DG+E+DL++
Sbjct: 63 DGSEVDLDL 71


>sp|PYRG_METTP|CTP synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GAELDLNMT 10
G+ +DLNMT
Sbjct: 102 GSPVDLNMT 110


>sp|PYRG_THEKO|CTP synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 64 DGGEVDLDL 72


>sp|PYRG_PYRHO|CTP synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 64 DGGEVDLDL 72


>sp|PYRG_THEGJ|CTP synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 64 DGGEVDLDL 72


>sp|PYRG_PYRFU|CTP synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 64 DGGEVDLDL 72


>sp|PYRG_METB6|CTP synthase|Methanoregula boonei (strain DSM 21154

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|PYRG_THEON|CTP synthase|Thermococcus onnurineus (strain NA1)

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 64 DGGEVDLDL 72


>sp|PYRG_PYRAB|CTP synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 64 DGGEVDLDL 72


>sp|PYRG_ARCFU|CTP synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGTEVDLDL 71


>sp|PYRG_PICTO|CTP synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DGAELDLNM 9
DG+E+DL++
Sbjct: 63 DGSEVDLDL 71


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|PYRG_THEAC|CTP synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|PYRG_METMA|CTP synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|PIMT_METM6|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanococcus maripaludis (strain C6 /

Query: 4 ELDLNM 9
ELDLNM
Sbjct: 71 ELDLNM 76


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|MV3K_PICTO|MEVALONATE-3-KINASE torridus (strain ATCC 700027

Query: 1 DGAELDLN 8
DG E+DLN
Sbjct: 63 DGKEIDLN 70


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 GAELDLNMT 10
G ELD N+T
Sbjct: 295 GTELDPNLT 303


>sp|PYRG_METBU|CTP synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 63 DGGEVDLDL 71


>sp|AROA_METM7|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 GAELDLN 8
GAE+DLN
Sbjct: 59 GAEIDLN 65


>sp|TRM56_METTH|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanothermobacter

Query: 1 DGAELDL 7
DGAE DL
Sbjct: 148 DGAEFDL 154


>sp|IF2G_METMP|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain DSM

Query: 2 GAELDLNMT 10
G ELD N+T
Sbjct: 295 GTELDPNLT 303


>sp|ARGJ_METVS|GLUTAMATE N-acetyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GAELDLN 8
GAE+D+N
Sbjct: 325 GAEMDMN 331


>sp|PYRG_HALWD|CTP synthase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 DGAELDLNM 9
DG E+DL++
Sbjct: 77 DGGEVDLDL 85


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 2 GAELDLN 8
GAE+D+N
Sbjct: 325 GAEMDMN 331


>sp|IF2G_METM5|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C5 /

Query: 2 GAELDLNMT 10
G ELD N+T
Sbjct: 295 GTELDPNLT 303


>sp|IF2G_METM7|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C7 /

Query: 2 GAELDLNMT 10
G ELD N+T
Sbjct: 295 GTELDPNLT 303


>sp|IF2G_METM6|TRANSLATION initiation factor 2 subunit|Methanococcus maripaludis (strain C6 /

Query: 2 GAELDLNMT 10
G ELD N+T
Sbjct: 295 GTELDPNLT 303


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 2 GAELDLNMT 10
G ELD NM+
Sbjct: 27 GIELDKNMS 35




13|Sequence|61|70|DLNMTRSHSG

>sp|HMD_METJA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DLNMTRSHSG 10
DLN+T H G
Sbjct: 194 DLNITSYHPG 203




14|Sequence|66|75|RSHSGGELES

>sp|RFCL_METM5|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C5 /

Query: 2 SHSGGELES 10
SHSGG+L +
Sbjct: 189 SHSGGDLRA 197


>sp|RFCL_METMP|REPLICATION factor C large subunit|Methanococcus maripaludis (strain DSM 14266

Query: 2 SHSGGELES 10
SHSGG+L +
Sbjct: 189 SHSGGDLRA 197


>sp|ASSY_IGNH4|ARGININOSUCCINATE synthase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 RSHSGGELE 9
RS GGELE
Sbjct: 180 RSIEGGELE 188


>sp|RFCL_METM7|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C7 /

Query: 2 SHSGGELES 10
SH+GG+L +
Sbjct: 189 SHAGGDLRA 197


>sp|RFCL_METM6|REPLICATION factor C large subunit|Methanococcus maripaludis (strain C6 /

Query: 2 SHSGGELES 10
SH+GG+L +
Sbjct: 189 SHAGGDLRA 197


>sp|RFCL_METVS|REPLICATION factor C large subunit|Methanococcus vannielii (strain ATCC 35089

Query: 2 SHSGGELES 10
SH+GG+L +
Sbjct: 189 SHAGGDLRA 197


>sp|GGR_METLZ|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SHSGGEL 8
SHSGG++
Sbjct: 87 SHSGGKV 93


>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 4 SGGELES 10
SGGELE+
Sbjct: 74 SGGELET 80




15|Sequence|71|80|GELESLARGR

>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GELESLARG 9
GE+E +ARG
Sbjct: 27 GEVEDIARG 35


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 ELESLARGR 10
EL+SLA GR
Sbjct: 563 ELDSLAPGR 571


>sp|DHE2_PYRCJ|NAD(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ELESLARG 9
ELE LARG
Sbjct: 123 ELEELARG 130


>sp|DHE4_PYRCJ|NADP(+)-DEPENDENT glutamate dehydrogenase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 ELESLARG 9
ELE LARG
Sbjct: 120 ELEELARG 127


>sp|AATI_PYRAB|A-TYPE ATP synthase subunit I|Pyrococcus abyssi (strain GE5 /

Query: 2 ELESLARGR 10
ELE +A GR
Sbjct: 177 ELEEIAEGR 185




16|Sequence|76|85|LARGRRSLGS

>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 2 ARGRRSLGS 10
++GRR +GS
Sbjct: 247 SKGRRKVGS 255




17|Sequence|81|90|RSLGSLTIAE

>sp|Y1688_HALSA|UNCHARACTERIZED protein VNG_1688C|Halobacterium salinarum (strain ATCC 700922

Query: 2 SLGSLTIAE 10
+LGSLT+ E
Sbjct: 275 TLGSLTLTE 283


>sp|FLAE_METVO|PUTATIVE flagella-related protein E|Methanococcus voltae

Query: 2 SLGSLTIAE 10
S+G LTIA+
Sbjct: 86 SVGKLTIAD 94




18|Sequence|86|95|LTIAEPAMIA

>sp|Y049_METTM|UNCHARACTERIZED protein MTBMA_c00490|Methanothermobacter marburgensis (strain ATCC

Query: 1 LTIAEPAM 8
+T+A+PAM
Sbjct: 109 ITLADPAM 116




19|Sequence|91|100|PAMIAECKTR

>sp|PRIS_HALLT|DNA primase small subunit PriS|Halorubrum lacusprofundi (strain ATCC

Query: 1 PAMIAECK 8
P M+AECK
Sbjct: 115 PEMLAECK 122


>sp|Y177_METMA|MACRO domain-containing protein MM_0177|Methanosarcina mazei (strain

Query: 1 PAMIAECKT 9
PA++ ECKT
Sbjct: 60 PALLEECKT 68




20|Sequence|96|105|ECKTRTEVFE

>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ECKTRTEVFE 10
EC+T +EVFE
Sbjct: 211 ECRTVSEVFE 220


>sp|Y231_METJA|UNCHARACTERIZED protein MJ0231|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ECKTRTEVFE 10
EC+TR +F+
Sbjct: 172 ECRTRHNIFD 181


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 ECKTRTEVFE 10
EC+T E FE
Sbjct: 211 ECRTLAEAFE 220


>sp|MTNA_METST|PUTATIVE methylthioribose-1-phosphate isomerase|Methanosphaera stadtmanae

Query: 1 ECKTRTEVFE 10
EC+T T+V +
Sbjct: 28 ECRTYTDVID 37


>sp|Y2181_ARCFU|UNCHARACTERIZED protein AF_2181|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ECKTRTEVF 9
+CK+R E F
Sbjct: 199 DCKSRAETF 207


>sp|ARCH_METBF|PROTEIN archease|Methanosarcina barkeri (strain Fusaro /

Query: 3 KTRTEVFE 10
KTR EVFE
Sbjct: 24 KTREEVFE 31


>sp|NITR_PYRAB|NITRILASE abyssi (strain GE5 /

Query: 3 KTRTEVFE 10
+TR EVFE
Sbjct: 51 ETREEVFE 58




21|Sequence|101|110|TEVFEISRRL

>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TEVFEISRRL 10
TEV+E+SRRL
Sbjct: 165 TEVWELSRRL 174


>sp|PAN_SULTO|PROTEASOME-ACTIVATING nucleotidase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 EVFEISRR 9
EVFE++RR
Sbjct: 218 EVFELARR 225


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 EVFEISRRL 10
E FE+S+RL
Sbjct: 99 EFFEVSKRL 107


>sp|Y2791_METMA|UPF0758 protein MM_2791|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 VFEISRRL 10
VFE++RRL
Sbjct: 89 VFELARRL 96


>sp|Y1979_METAC|UPF0758 protein MA_1979|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 VFEISRRL 10
VFE++RRL
Sbjct: 89 VFELARRL 96


>sp|Y2303_METBF|UPF0758 protein Mbar_A2303|Methanosarcina barkeri (strain Fusaro /

Query: 3 VFEISRRL 10
VFE++RRL
Sbjct: 89 VFELARRL 96


>sp|SYC_PYRNV|CYSTEINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 EVFEISRRL 10
E FE++RRL
Sbjct: 99 EYFEMTRRL 107


>sp|SYC_PYRAR|CYSTEINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 EVFEISRRL 10
E FE+S+RL
Sbjct: 99 EFFEMSKRL 107


>sp|ACYP_SACS2|ACYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 TEVFEISRRL 10
TEVFE+ +R+
Sbjct: 7 TEVFEMLKRM 16


>sp|DAPAL_THEKO|UNCHARACTERIZED DapA-like lyase TK1237|Thermococcus kodakarensis (strain ATCC

Query: 2 EVFEISRRL 10
E FE SR+L
Sbjct: 229 EAFEYSRKL 237


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 EVFEISRRL 10
E +EI RRL
Sbjct: 401 ETYEIERRL 409


>sp|PURP_METBF|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina barkeri (strain Fusaro /

Query: 2 EVFEISRRL 10
+VFEIS R+
Sbjct: 303 KVFEISARI 311


>sp|PURP_METBU|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanococcoides burtonii (strain DSM

Query: 2 EVFEISRRL 10
+VFEIS R+
Sbjct: 302 KVFEISARI 310


>sp|CDC62_SULAC|ORC1-TYPE DNA replication protein 2|Sulfolobus acidocaldarius (strain ATCC

Query: 1 TEVFEISRRL 10
T++FE RR+
Sbjct: 356 TQIFEYVRRM 365


>sp|PURP_METAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanosarcina acetivorans (strain ATCC

Query: 2 EVFEISRRL 10
+VFEIS R+
Sbjct: 303 KVFEISARI 311




22|Sequence|106|115|ISRRLIDRTN

>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 RRLIDRTN 10
R LID+TN
Sbjct: 945 RSLIDKTN 952


>sp|SYP_METM5|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 ISRRLIDRTN 10
I R+L+D TN
Sbjct: 43 ILRKLLDETN 52


>sp|SYP_METM6|PROLINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 ISRRLIDRTN 10
I R+L+D TN
Sbjct: 43 ILRKLLDETN 52


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 3 RRLIDRTN 10
R LID+TN
Sbjct: 994 RALIDKTN 1001


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ISRRLIDR 8
IS+RLI+R
Sbjct: 507 ISKRLIER 514


>sp|SYFA_METJA|PHENYLALANINE--TRNA ligase alpha subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ISRRLIDRTN 10
+SRRLI RT+
Sbjct: 313 VSRRLILRTH 322


>sp|TRPD_META3|ANTHRANILATE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 SRRLIDRTN 10
++++ID+TN
Sbjct: 130 AKKMIDKTN 138


>sp|CCA_METB6|CCA-ADDING enzyme|Methanoregula boonei (strain DSM 21154

Query: 1 ISRRLIDRTN 10
++RRL+D N
Sbjct: 29 VARRLLDAIN 38


>sp|DPS_PYRFU|DNA protection during starvation protein|Pyrococcus furiosus (strain

Query: 2 SRRLIDRT 9
+RRL++RT
Sbjct: 5 NRRLVERT 12


>sp|NTPTH_PYRHO|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ISRRLIDR 8
+ RRL+DR
Sbjct: 132 VHRRLVDR 139




23|Sequence|111|120|IDRTNANFLV

>sp|AROA_METJA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 IDRTNANFLV 10
ID+T+ FLV
Sbjct: 214 IDKTDNGFLV 223


>sp|Y1336_METJA|UNCHARACTERIZED protein MJ1336|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IDRTNANFLV 10
+D+ N+NF++
Sbjct: 113 VDKYNSNFVI 122


>sp|CDCH_HALSA|PROTEIN CdcH|Halobacterium salinarum (strain ATCC 700922

Query: 2 DRTNANFL 9
+ TNANF+
Sbjct: 518 NETNANFI 525




24|Sequence|116|125|ANFLVWPPCV

>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FLVWPPCV 10
FL+WPP V
Sbjct: 116 FLLWPPFV 123


>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FLVWPPCV 10
FL+WPP V
Sbjct: 114 FLLWPPFV 121


>sp|GLGB_PICTO|1,4-ALPHA-GLUCAN branching enzyme GlgB|Picrophilus torridus (strain ATCC 700027

Query: 2 NFLVWPP 8
NF+VW P
Sbjct: 133 NFVVWAP 139


>sp|CDPAS_PYRIL|CDP-ARCHAEOL synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 FLVWPPCV 10
L+WPP V
Sbjct: 8 LLIWPPYV 15


>sp|CDPAS_PYRCJ|CDP-ARCHAEOL synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 FLVWPPCV 10
L+WPP V
Sbjct: 9 LLIWPPYV 16


>sp|MTNA_PYRHO|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus horikoshii

Query: 4 LVWPP 8
+VWPP
Sbjct: 340 VVWPP 344


>sp|MTNA_PYRFU|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus furiosus (strain

Query: 4 LVWPP 8
+VWPP
Sbjct: 340 VVWPP 344


>sp|MTNA_PYRAB|PUTATIVE methylthioribose-1-phosphate isomerase|Pyrococcus abyssi (strain

Query: 4 LVWPP 8
+VWPP
Sbjct: 340 VVWPP 344


>sp|UPPS_METJA|TRITRANS,POLYCIS-UNDECAPRENYL-DIPHOSPHATE synthase (geranylgeranyl-diphosphate specific)|Methanocaldococcus

Query: 1 ANFLVW 6
+NFL+W
Sbjct: 237 SNFLIW 242


>sp|EF2_NANEQ|ELONGATION factor 2|Nanoarchaeum equitans (strain Kin4-M)

Query: 4 LVWPPCV 10
+ W PC+
Sbjct: 592 IAWEPCI 598


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 ANFLVWP 7
+ +LVWP
Sbjct: 270 SRYLVWP 276


>sp|SYE_AERPE|GLUTAMATE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ANFLVWP 7
+ +LVWP
Sbjct: 278 SRYLVWP 284


>sp|SRP19_THEPD|SIGNAL recognition particle 19 kDa|Thermofilum pendens (strain DSM 2475

Query: 3 FLVWP 7
F+VWP
Sbjct: 7 FIVWP 11


>sp|CDPAS_PYRAE|CDP-ARCHAEOL synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 LVWPPCV 10
L+WPP V
Sbjct: 9 LIWPPYV 15


>sp|CDPAS_PYRAR|CDP-ARCHAEOL synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 4 LVWPPCV 10
L+WPP V
Sbjct: 9 LIWPPYV 15




25|Sequence|121|130|WPPCVEVQRC

>sp|KTHY_METBU|PROBABLE thymidylate kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 PCVEVQRC 10
P V VQRC
Sbjct: 135 PAVAVQRC 142


>sp|COBQ_METHJ|PROBABLE cobyric acid synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 PPCVEV 7
PPCVE+
Sbjct: 67 PPCVEM 72


>sp|DPCKG_CENSY|GTP-DEPENDENT dephospho-CoA kinase|Cenarchaeum symbiosum (strain A)

Query: 2 PPCVEVQRC 10
PP VE+ RC
Sbjct: 63 PPDVEIIRC 71


>sp|IXTPA_PYRAE|DITP/XTP pyrophosphatase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 PPCVEVQR 9
P C+EV+R
Sbjct: 22 PFCIEVER 29


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 2 PPCVE 6
PPC+E
Sbjct: 214 PPCIE 218


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 2 PPCVEVQ 8
PPC+E +
Sbjct: 75 PPCMEAK 81


>sp|COFG_METBU|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 WPPCVEVQR 9
WP +E+Q+
Sbjct: 277 WPDVIELQK 285


>sp|RL15E_NANEQ|LARGE ribosomal subunit protein eL15|Nanoarchaeum equitans (strain

Query: 2 PPCVEVQR 9
PP VEV+R
Sbjct: 33 PPIVEVER 40


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 3 PCVEVQRC 10
PC +++ C
Sbjct: 127 PCYDIENC 134


>sp|RS17_SULTO|SMALL ribosomal subunit protein uS17|Sulfurisphaera tokodaii (strain

Query: 2 PPCVEVQ 8
PPC++V+
Sbjct: 82 PPCLDVK 88


>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 WPPCVEVQRC 10
+PP E+ RC
Sbjct: 110 YPPTPELDRC 119


>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 2 PPCVEVQ 8
PPC+ V+
Sbjct: 82 PPCINVR 88




26|Sequence|126|135|EVQRCSGCCN

>sp|IF2G_PYRFU|TRANSLATION initiation factor 2 subunit|Pyrococcus furiosus (strain ATCC

Query: 1 EVQRCSGC 8
E++RCS C
Sbjct: 57 EIRRCSNC 64


>sp|PORB_METBF|PYRUVATE synthase subunit PorB|Methanosarcina barkeri (strain Fusaro /

Query: 5 CSGCCN 10
C+GCC+
Sbjct: 17 CAGCCD 22


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 3 QRCSGCCN 10
++C CCN
Sbjct: 18 EKCEACCN 25


>sp|CYAS_METTP|CYSTEATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 RCSGCCN 10
RC+GC N
Sbjct: 7 RCAGCGN 13


>sp|Y932_METKA|UNCHARACTERIZED protein MK0932|Methanopyrus kandleri (strain AV19 /

Query: 3 QRCSGCCN 10
++CSGC N
Sbjct: 193 RKCSGCGN 200


>sp|VAPC1_THEAC|RIBONUCLEASE VapC1|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VQRCSGC 8
+ RC+GC
Sbjct: 156 IYRCTGC 162


>sp|ACDA1_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 EVQRCSGCCN 10
E+ +C+ C N
Sbjct: 401 EINKCTQCMN 410


>sp|Y1349_METJA|UNCHARACTERIZED protein MJ1349|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EVQRCSGC 8
+ RCSGC
Sbjct: 16 DTNRCSGC 23


>sp|ACDA1_METKA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanopyrus kandleri

Query: 1 EVQRCSGC 8
E +RC GC
Sbjct: 386 EAKRCLGC 393


>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EVQRCSGCCN 10
E+Q+ G CN
Sbjct: 182 EMQKRKGVCN 191


>sp|NARB_HALMT|PUTATIVE respiratory nitrate reductase subunit|Haloferax mediterranei

Query: 1 EVQRCSGCCN 10
E C GCC+
Sbjct: 9 ESGACDGCCS 18


>sp|KORB_METJA|2-OXOGLUTARATE synthase subunit KorB|Methanocaldococcus jannaschii (strain ATCC

Query: 5 CSGCCN 10
CSGC N
Sbjct: 18 CSGCGN 23


>sp|DSRA_ARCFU|SULFITE reductase, dissimilatory-type subunit alpha|Archaeoglobus fulgidus

Query: 4 RCSGCCN 10
+C+GC N
Sbjct: 216 KCAGCPN 222


>sp|Y416_METJA|DOUBLE zinc ribbon protein MJ0416|Methanocaldococcus jannaschii (strain

Query: 1 EVQRCSGCCN 10
EV+RC C N
Sbjct: 130 EVERCPNCNN 139




27|Sequence|131|140|SGCCNNRNVQ

>sp|DPHB_THEVO|DIPHTHINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 GCCNNR 7
G CNNR
Sbjct: 188 GVCNNR 193


>sp|Y1442_METJA|UNCHARACTERIZED protein MJ1442|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SGCCNNRNVQ 10
SGC +NV+
Sbjct: 35 SGCIGGKNVE 44


>sp|NIFH_METMP|NITROGENASE iron protein|Methanococcus maripaludis (strain DSM 14266

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 184 CNSRNV 189


>sp|NIFH_METMI|NITROGENASE iron protein|Methanococcus maripaludis (Methanococcus deltae)

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 184 CNSRNV 189


>sp|NIFH2_METBA|NITROGENASE iron protein 2|Methanosarcina barkeri

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 181 CNSRNV 186


>sp|SYK_METST|LYSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 GCCNN 6
GCC N
Sbjct: 97 GCCEN 101


>sp|NIFH_METMA|NITROGENASE iron protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 181 CNSRNV 186


>sp|NIFH1_METTH|NITROGENASE iron protein 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 184 CNSRNV 189


>sp|CFBC_METBF|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanosarcina barkeri

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 180 CNSRNV 185


>sp|NIFH1_METIV|NITROGENASE iron protein 1|Methanobacterium ivanovii

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 184 CNSRNV 189


>sp|NIFH1_METTM|NITROGENASE iron protein 1|Methanothermobacter marburgensis (strain ATCC

Query: 4 CNNRNV 9
CN+RNV
Sbjct: 184 CNSRNV 189




28|Sequence|136|145|NRNVQCRPTQ

***** No hits found ******


29|Sequence|141|150|CRPTQVQLRP

>sp|CS2H_ACIS1|CARBON disulfide hydrolase|Acidianus sp. (strain A1-3)

Query: 2 RPTQVQLRP 10
+PT+VQL P
Sbjct: 111 KPTEVQLDP 119


>sp|SYK_THEKO|LYSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RPTQVQLRP 10
RP +++LRP
Sbjct: 439 RPPEIELRP 447


>sp|AROC_SULTO|CHORISMATE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 CRPTQV 6
C+PTQV
Sbjct: 383 CKPTQV 388


>sp|KPRS_PYRFU|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PTQVQLRP 10
PT+VQ+ P
Sbjct: 187 PTEVQMTP 194


>sp|Y1117_AERPE|UPF0173 metal-dependent hydrolase APE_1117|Aeropyrum pernix (strain ATCC

Query: 1 CRPTQVQ-LRP 10
C PTQV+ L+P
Sbjct: 221 CLPTQVRILKP 231


>sp|KPRS_PYRAB|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrococcus abyssi (strain GE5 /

Query: 3 PTQVQLRP 10
PT+V+++P
Sbjct: 190 PTEVRMKP 197


>sp|PURL_META3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CRPTQVQLRP 10
C PT +L P
Sbjct: 449 CNPTYCKLNP 458




30|Sequence|146|155|VQLRPVQVRK

>sp|RL34_HYPBU|LARGE ribosomal subunit protein eL34|Hyperthermus butylicus (strain DSM

Query: 2 QLRPVQVRK 10
+LRPV++RK
Sbjct: 49 RLRPVELRK 57


>sp|Y039_METKA|UPF0273 protein MK0039|Methanopyrus kandleri (strain AV19 /

Query: 5 PVQVRK 10
PVQVRK
Sbjct: 64 PVQVRK 69




31|Sequence|151|160|VQVRKIEIVR

>sp|DNAG_NATPD|DNA primase DnaG|Natronomonas pharaonis (strain ATCC 35678

Query: 1 VQVRKIEIVR 10
++VRKIE VR
Sbjct: 100 IEVRKIEDVR 109


>sp|LEUC_HALLT|3-ISOPROPYLMALATE dehydratase large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 QVRKIEI 8
QVRKIE+
Sbjct: 165 QVRKIEV 171


>sp|BTUDA_HALSA|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 2 QVRKIEIVR 10
Q+R +E+VR
Sbjct: 172 QIRTLEVVR 180


>sp|BTUDA_HALS3|COBALAMIN import ATP-binding protein BtuD|Halobacterium salinarum (strain

Query: 2 QVRKIEIVR 10
Q+R +E+VR
Sbjct: 172 QIRTLEVVR 180


>sp|Y860_ARCFU|UNCHARACTERIZED protein AF_0860|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VQVRKIEIVR 10
VQ KIEIVR
Sbjct: 13 VQPDKIEIVR 22




32|Sequence|156|165|IEIVRKKPIF

>sp|MTTB_METTE|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina thermophila

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|MTTB2_METMA|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|MTTB2_METAC|TRIMETHYLAMINE methyltransferase MttB2|Methanosarcina acetivorans (strain ATCC

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|MTTB1_METAC|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina acetivorans (strain ATCC

Query: 2 EIVRKKPIF 10
E RKKPIF
Sbjct: 206 EEARKKPIF 214


>sp|KADA_THEKO|ADENYLATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IEIVRKKPIF 10
+EI RK+P+
Sbjct: 75 VEIARKEPVL 84


>sp|HPRT_METAC|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 1 IEIVRKKPIF 10
+ IVRK+P F
Sbjct: 79 LTIVRKRPYF 88


>sp|HPRT_METMA|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC

Query: 1 IEIVRKKPIF 10
+ IVRK+P F
Sbjct: 79 LTIVRKRPYF 88


>sp|HPRT_METBF|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEIVRKKPIF 10
+ IVRK+P F
Sbjct: 80 LTIVRKRPYF 89


>sp|AMPD_PYRHO|ANHYDROMEVALONATE phosphate decarboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 EIVRKKPI 9
+IVRK+PI
Sbjct: 253 DIVRKQPI 260


>sp|AMPD_METJA|ANHYDROMEVALONATE phosphate decarboxylase|Methanocaldococcus jannaschii (strain ATCC

Query: 2 EIVRKKPI 9
+IVRK+PI
Sbjct: 246 DIVRKQPI 253


>sp|ACDB2_METTE|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 IEIVRKKPI 9
+E+VR KP+
Sbjct: 34 LELVRAKPM 42


>sp|ACDB2_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 IEIVRKKPI 9
+E+VR KP+
Sbjct: 34 LELVRAKPM 42


>sp|ACDB1_METAC|ACETYL-COA decarbonylase/synthase complex subunit beta|Methanosarcina

Query: 1 IEIVRKKPI 9
+E+VR KP+
Sbjct: 34 LELVRAKPM 42


>sp|SYY_THEKO|TYROSINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IEIVRKKP 8
IE+++KKP
Sbjct: 7 IELIKKKP 14


>sp|PYRE_THEGJ|OROTATE phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 3 IVRKKP 8
IVRKKP
Sbjct: 92 IVRKKP 97


>sp|PYRE_THEKO|OROTATE phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 3 IVRKKP 8
IVRKKP
Sbjct: 92 IVRKKP 97




33|Sequence|161|170|KKPIFKKATV

>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 3 PIFKKATV 10
PIF KAT+
Sbjct: 177 PIFAKATI 184


>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KKPIFKKATV 10
KKP F+KA +
Sbjct: 57 KKPAFEKAGI 66


>sp|Y296_METJA|PROBABLE metallo-hydrolase MJ0296|Methanocaldococcus jannaschii (strain ATCC

Query: 1 KKPIFKKAT 9
PIFK AT
Sbjct: 94 NNPIFKNAT 102


>sp|FEN_METLZ|FLAP endonuclease 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 KKPIFKKATV 10
K P+FK +T+
Sbjct: 83 KPPVFKASTL 92


>sp|AGL15_HALVD|PROBABLE low-salt glycan biosynthesis flippase|Haloferax volcanii (strain

Query: 1 KKPIFKKA 8
KKP FK A
Sbjct: 191 KKPSFKNA 198


>sp|RL5_AERPE|LARGE ribosomal subunit protein uL5|Aeropyrum pernix (strain ATCC

Query: 1 KKPIFKKA 8
+KP+F+KA
Sbjct: 61 QKPVFRKA 68


>sp|SYM_PYRNV|METHIONINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 KPIFKKAT 9
KP+F+K T
Sbjct: 528 KPLFRKYT 535


>sp|GMS_METOI|GMGT synthase|Methanothermococcus okinawensis (strain DSM 14208

Query: 1 KKPIFKKATV 10
K P+FKK +
Sbjct: 83 KDPLFKKGLI 92


>sp|SYM_SACI4|METHIONINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 KKPIFKKA 8
K PIFKK+
Sbjct: 178 KAPIFKKS 185


>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum aerophilum

Query: 1 KKPIFK 6
KKPIFK
Sbjct: 109 KKPIFK 114


>sp|SYM_PYRAR|METHIONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 KPIFKKAT 9
KP+F+K T
Sbjct: 533 KPLFRKIT 540




34|Sequence|166|175|KKATVTLEDH

>sp|PCKA_AERPE|PHOSPHOENOLPYRUVATE carboxykinase (ATP)|Aeropyrum pernix (strain ATCC 700893

Query: 2 KATVTLEDH 10
K T+T+EDH
Sbjct: 214 KTTLTVEDH 222


>sp|DAPA_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KKATVTLEDH 10
+ AT+TLE+H
Sbjct: 48 ESATLTLEEH 57


>sp|PCNA2_SULOH|DNA polymerase sliding clamp 2|Sulfurisphaera ohwakuensis

Query: 1 KKATVTLED 9
K ATVTLE+
Sbjct: 85 KSATVTLEE 93


>sp|PCNA2_SULTO|DNA polymerase sliding clamp 2|Sulfurisphaera tokodaii (strain DSM

Query: 1 KKATVTLED 9
K ATVTLE+
Sbjct: 85 KSATVTLEE 93


>sp|DAPA_METMJ|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 KKATVTLEDH 10
+ AT+T E+H
Sbjct: 49 ESATLTFEEH 58


>sp|RL23_METMP|LARGE ribosomal subunit protein uL23|Methanococcus maripaludis (strain

Query: 1 KKATVTLEDH 10
KKA +TL+D
Sbjct: 64 KKAYITLKDE 73


>sp|RL23_METBF|LARGE ribosomal subunit protein uL23|Methanosarcina barkeri (strain

Query: 1 KKATVTLED 9
KKA +T ED
Sbjct: 60 KKAILTFED 68




35|Sequence|171|180|TLEDHLACKC

>sp|ILVD_METTH|DIHYDROXY-ACID dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 TLEDHLACKC 10
TLEDH+ +C
Sbjct: 327 TLEDHINREC 336


>sp|TRPF_METTH|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DHLACKC 10
DH+ C C
Sbjct: 129 DHIPCSC 135


>sp|KHSE_PYRFU|HOMOSERINE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LEDHLA 7
LEDHLA
Sbjct: 213 LEDHLA 218


>sp|TRI_THEVO|TRICORN protease|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LEDHLAC 8
LE+H++C
Sbjct: 188 LENHISC 194


>sp|HYPF_METJA|PROBABLE carbamoyltransferase HypF|Methanocaldococcus jannaschii (strain

Query: 5 HLACK 9
HLACK
Sbjct: 234 HLACK 238


>sp|AKSA_METAC|HOMOCITRATE synthase AksA|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TLEDHLAC 8
TLED L C
Sbjct: 128 TLEDMLGC 135




36|Sequence|176|185|LACKCETVAA

>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 2 ACKCETV 8
+CKCE +
Sbjct: 229 SCKCEDI 235


>sp|GATE_DESA1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Desulfurococcus amylolyticus (strain

Query: 1 LACKCETV 8
L CKC T+
Sbjct: 27 LFCKCPTL 34




37|Sequence|181|190|ETVAAARPVT

***** No hits found ******


38|Sequence|186|195|ARPVTRSPGG

>sp|MV3K_THEAC|MEVALONATE 3-kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ARPVTRSP 8
A PVTR+P
Sbjct: 23 ANPVTRTP 30


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 1 ARPVTRSPG 9
ARPV SPG
Sbjct: 171 ARPVVVSPG 179


>sp|MDH_METKA|MALATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 3 PVTRSPG 9
PVTR PG
Sbjct: 195 PVTRMPG 201


>sp|VHUA_METJA|F420-NON-REDUCING hydrogenase vhu subunit A|Methanocaldococcus jannaschii (strain

Query: 3 PVTRSPGG 10
PVT PGG
Sbjct: 164 PVTGIPGG 171




39|Sequence|191|200|RSPGGSQEQR

>sp|CMR7B_SACS2|PUTATIVE CRISPR system CMR subunit|Saccharolobus solfataricus (strain

Query: 2 SPGGSQE 8
SPGGSQ+
Sbjct: 3 SPGGSQQ 9


>sp|GSA_NITMS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 SPGGSQEQ 9
+PGG+QE
Sbjct: 241 APGGAQEH 248


>sp|RPIA_HALWD|RIBOSE-5-PHOSPHATE isomerase A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 RSPGGSQEQR 10
++ GGS+EQ+
Sbjct: 2 KTTGGSEEQK 11


>sp|SERK_THEKO|ADP-DEPENDENT L-serine kinase SerK|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 PGGSQEQR 10
PGG +EQ+
Sbjct: 152 PGGLEEQK 159


>sp|RS11_NATPD|SMALL ribosomal subunit protein uS11|Natronomonas pharaonis (strain

Query: 1 RSPGGSQEQ 9
R PGG+Q+Q
Sbjct: 77 RGPGGNQQQ 85


>sp|RS11_PYRHO|SMALL ribosomal subunit protein uS11|Pyrococcus horikoshii (strain ATCC

Query: 1 RSPGGSQEQ 9
R+PGGS+ +
Sbjct: 84 RAPGGSKSK 92


>sp|RS11_PYRFU|SMALL ribosomal subunit protein uS11|Pyrococcus furiosus (strain ATCC

Query: 1 RSPGGSQEQ 9
R+PGGS+ +
Sbjct: 84 RAPGGSKSK 92


>sp|RS11_PYRAB|SMALL ribosomal subunit protein uS11|Pyrococcus abyssi (strain GE5 /

Query: 1 RSPGGSQEQ 9
R+PGGS+ +
Sbjct: 84 RAPGGSKSK 92


>sp|GSA_METTH|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 SPGGSQE 8
+PGG+QE
Sbjct: 240 APGGAQE 246


>sp|RS11_THEGJ|SMALL ribosomal subunit protein uS11|Thermococcus gammatolerans (strain

Query: 1 RSPGGSQEQ 9
R+PGGS+ +
Sbjct: 85 RAPGGSKSK 93


>sp|RS11_THEKO|SMALL ribosomal subunit protein uS11|Thermococcus kodakarensis (strain

Query: 1 RSPGGSQEQ 9
R+PGGS+ +
Sbjct: 87 RAPGGSKSK 95


>sp|RS11_THEON|SMALL ribosomal subunit protein uS11|Thermococcus onnurineus (strain

Query: 1 RSPGGSQEQ 9
R+PGGS+ +
Sbjct: 86 RAPGGSKSK 94




40|Sequence|196|205|SQEQRAKTPQ

***** No hits found ******


41|Sequence|201|210|AKTPQTRVTI

***** No hits found ******


42|Sequence|206|215|TRVTIRTVRV

>sp|SYR_METKA|ARGININE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 VTIRTVR 9
VTIRT+R
Sbjct: 13 VTIRTIR 19




43|Sequence|211|220|RTVRVRRPPK

>sp|SYY_METLZ|TYROSINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 TVRVRRPPK 10
T+ +RRP K
Sbjct: 258 TIAIRRPEK 266


>sp|PPSA_ARCFU|PROBABLE phosphoenolpyruvate synthase|Archaeoglobus fulgidus (strain ATCC

Query: 1 RTVRVRRPPK 10
+TV+V PP+
Sbjct: 255 KTVKVELPPE 264


>sp|CBID_METKA|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 RTVRVRRP 8
RTVRVR P
Sbjct: 74 RTVRVRLP 81




44|Sequence|216|225|RRPPKGKHRK

>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RPPKGKHR 9
RPP G HR
Sbjct: 450 RPPTGVHR 457


>sp|SYH_METLZ|HISTIDINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 RPPKGKHRK 10
RP KG++R+
Sbjct: 110 RPQKGRYRQ 118


>sp|RL30_HALWD|LARGE ribosomal subunit protein uL30|Haloquadratum walsbyi (strain DSM

Query: 3 PPKGKHR 9
PP+G HR
Sbjct: 120 PPRGGHR 126


>sp|SYH_METB6|HISTIDINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 RPPKGKHRK 10
RP KG++R+
Sbjct: 110 RPQKGRYRQ 118


>sp|SYH_PYRIL|HISTIDINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RRPPKG 6
RRPP+G
Sbjct: 9 RRPPRG 14


>sp|SYH_METPE|HISTIDINE--TRNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 2 RPPKGKHRK 10
RP KG++R+
Sbjct: 110 RPQKGRYRQ 118


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 2 RPPKGKH 8
RPP G H
Sbjct: 453 RPPTGTH 459


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 2 RPPKGKH 8
RPP G H
Sbjct: 453 RPPTGTH 459


>sp|SYH_METHJ|HISTIDINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 RPPKGKHRK 10
RP KG++R+
Sbjct: 110 RPQKGRYRQ 118


>sp|GLCD3_SACS2|GLUCOSE 1-dehydrogenase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RPPKGKH 8
RPP GK+
Sbjct: 55 RPPNGKN 61


>sp|SYH_ARCFU|HISTIDINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RPPKGKHRK 10
RP KG++R+
Sbjct: 111 RPQKGRYRE 119


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PPKGKHR 9
PP G+HR
Sbjct: 238 PPSGEHR 244


>sp|SYH_METMJ|HISTIDINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 RPPKGKHRK 10
RP KG++R+
Sbjct: 110 RPQKGRYRQ 118


>sp|SYH_PYRNV|HISTIDINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RRPPKG 6
RRPP+G
Sbjct: 9 RRPPRG 14


>sp|THIC_HALMA|PHOSPHOMETHYLPYRIMIDINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RPPKGKH 8
RPP G H
Sbjct: 452 RPPVGTH 458


>sp|CMR3_PYRFU|CRISPR system Cmr subunit Cmr3|Pyrococcus furiosus (strain ATCC 43587

Query: 3 PPKGKHR 9
PPKGK++
Sbjct: 107 PPKGKYK 113


>sp|CAS1_NANEQ|CRISPR-ASSOCIATED endonuclease Cas1|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 RRPPKGK 7
RRPPK +
Sbjct: 187 RRPPKNE 193


>sp|GGR_PICTO|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Picrophilus torridus (strain ATCC 700027

Query: 4 PKGKH 8
PKGKH
Sbjct: 215 PKGKH 219


>sp|RS8E_METB6|SMALL ribosomal subunit protein eS8|Methanoregula boonei (strain DSM

Query: 1 RRPPKGKHR 9
RRP +GK R
Sbjct: 16 RRPAQGKRR 24


>sp|Y1037_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 RRPPKGK 7
RRP KGK
Sbjct: 52 RRPQKGK 58


>sp|RL32_THEAC|LARGE ribosomal subunit protein eL32|Thermoplasma acidophilum (strain

Query: 2 RPPKGKHRK 10
R P+GKH K
Sbjct: 42 RKPRGKHSK 50


>sp|RL32_THEVO|LARGE ribosomal subunit protein eL32|Thermoplasma volcanium (strain

Query: 2 RPPKGKHRK 10
R P+GKH K
Sbjct: 42 RKPRGKHSK 50




45|Sequence|221|230|GKHRKFKHTH

>sp|ARCSA_METAC|ARCHAEOSINE synthase subunit alpha|Methanosarcina acetivorans (strain ATCC

Query: 1 GKHRKFKH 8
GK+RKF H
Sbjct: 359 GKYRKFVH 366


>sp|PUS10_THEAC|TRNA pseudouridine synthase Pus10|Thermoplasma acidophilum (strain ATCC

Query: 1 GKHRKFK 7
GK+RKF+
Sbjct: 164 GKYRKFR 170


>sp|HPRT_METRM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobrevibacter ruminantium (strain

Query: 1 GKHRKFKHT 9
G+H KHT
Sbjct: 92 GEHEILKHT 100


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 KHRKFKHT 9
KHR +HT
Sbjct: 332 KHRVLRHT 339


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 KHRKFKHT 9
KHR +HT
Sbjct: 332 KHRVLRHT 339


>sp|KCY_PYRAB|CYTIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 GKHRKFKHTH 10
KH FKH +
Sbjct: 26 AKHYGFKHVY 35


>sp|Y1288_METJA|UNCHARACTERIZED protein MJ1288|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 HRKFKH 8
HRK++H
Sbjct: 186 HRKYEH 191


>sp|BIOD_META3|ATP-DEPENDENT dethiobiotin synthetase BioD|Methanococcus aeolicus (strain ATCC

Query: 1 GKHRKFK 7
GKH K+K
Sbjct: 21 GKHLKYK 27




46|Sequence|226|235|FKHTHDKTAL

>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FKHTHDKTAL 10
F+HTHD L
Sbjct: 1044 FEHTHDTVDL 1053


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FKHTHDKT 8
F HTHD T
Sbjct: 2135 FNHTHDTT 2142


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 FKHTHD 6
F+HTHD
Sbjct: 1241 FRHTHD 1246


>sp|SYM_NATPD|METHIONINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 FKHTHDKT 8
+ HTHD+T
Sbjct: 98 YGHTHDET 105


>sp|SYM_HALWD|METHIONINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FKHTHDKT 8
+ HTHD+T
Sbjct: 116 YGHTHDET 123


>sp|DP2L_METST|DNA polymerase II large subunit|Methanosphaera stadtmanae (strain ATCC

Query: 1 FKHTHD 6
FK THD
Sbjct: 443 FKETHD 448


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 FKHTHD 6
FKHT D
Sbjct: 129 FKHTRD 134




47|Sequence|231|241|DKTALKETLGA

>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 DKTALKETLGA 11
D+TALKE L A
Sbjct: 580 DQTALKERLDA 590


>sp|RL11_METPE|LARGE ribosomal subunit protein uL11|Methanosphaerula palustris (strain

Query: 2 KTALKETLG 10
KTA+KE +G
Sbjct: 118 KTAVKEVIG 126


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus (strain

Query: 2 KTALKETLGA 11
KTAL+ LGA
Sbjct: 94 KTALERKLGA 103


>sp|EF1B_METM5|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C5 /

Query: 1 DKTALKETL 9
+K ALKETL
Sbjct: 18 EKEALKETL 26


>sp|EF1B_METM6|ELONGATION factor 1-beta|Methanococcus maripaludis (strain C6 /

Query: 1 DKTALKETL 9
+K ALKETL
Sbjct: 18 EKEALKETL 26






THE END