PDE8B_HUMAN Blast OutputR
Archaea
1|SequenceR|10|1|SVHISPACGM

>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 VHISPACGM 10
++I+P CGM
Sbjct: 288 LYINPDCGM 296


>sp|METE_METTH|METHIONINE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 SVHISPACGM 10
+++I P CGM
Sbjct: 278 NLYIDPDCGM 287


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VHISPACGM 10
VHI+P GM
Sbjct: 324 VHIAPGHGM 332


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VHISPACGM 10
VHI+P GM
Sbjct: 324 VHIAPGHGM 332


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VHISPACGM 10
VHI+P GM
Sbjct: 324 VHIAPGHGM 332


>sp|METE_PYRFU|METHIONINE synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 VHISPACGM 10
V+I+P CG+
Sbjct: 288 VYINPDCGL 296


>sp|METE_METTM|METHIONINE synthase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 SVHISPACGM 10
+++I P CGM
Sbjct: 278 NLYIDPDCGM 287


>sp|Y1629_ARCFU|UNCHARACTERIZED protein AF_1629|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SVHISPACG 9
SV I+P CG
Sbjct: 211 SVSINPDCG 219


>sp|METK_HALMA|S-ADENOSYLMETHIONINE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 1 SVHISPACGM 10
++H+ PA G+
Sbjct: 5 NIHVQPASGL 14


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum labreanum

Query: 2 VHISPACGM 10
+HI P CG+
Sbjct: 254 MHICPHCGV 262


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 HISPACG 9
HI P CG
Sbjct: 713 HICPNCG 719


>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 VHISPACGM 10
V I+P CG+
Sbjct: 309 VRINPDCGL 317


>sp|METE_METJA|METHIONINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SVHISPACGM 10
++ I P CGM
Sbjct: 275 NILIDPDCGM 284


>sp|RGYR2_SULAC|REVERSE gyrase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SVHISP 6
S+HISP
Sbjct: 899 SIHISP 904


>sp|Y2072_ARCFU|UPF0235 protein AF_2072|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SVHISPA 7
SVH+SP
Sbjct: 11 SVHVSPG 17


>sp|METE_THEKO|METHIONINE synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 VHISPACGM 10
++I+P CG+
Sbjct: 288 LYINPDCGL 296


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 VHISPACGM 10
++I+P CG+
Sbjct: 288 LYINPDCGL 296


>sp|HIS1_METAR|ATP phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 SVHISPACG 9
SVH+ CG
Sbjct: 132 SVHVVEVCG 140


>sp|RBL_METAC|RIBULOSE bisphosphate carboxylase|Methanosarcina acetivorans (strain ATCC

Query: 3 HISPACGM 10
HI PA G+
Sbjct: 22 HIEPAAGI 29


>sp|RL37A_THEON|LARGE ribosomal subunit protein eL43|Thermococcus onnurineus (strain

Query: 3 HISPACG 9
HI P CG
Sbjct: 36 HICPVCG 42




2|SequenceR|15|6|IVGSQSVHIS

>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 2 VGSQSVH 8
VG QSVH
Sbjct: 735 VGQQSVH 741


>sp|SYDND_METAC|ASPARTATE--TRNA(ASP/ASN) ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 GSQSVHIS 10
G+Q +HIS
Sbjct: 371 GAQRIHIS 378




3|SequenceR|20|11|SDRCYIVGSQ

>sp|GGGPS_THEVO|GERANYLGERANYLGLYCERYL phosphate synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SDRCYIVGSQ 10
SDR +IVG Q
Sbjct: 100 SDREFIVGHQ 109


>sp|Y1572_METJA|PUTATIVE ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 SDRCYIVGSQ 10
+DRCY++ +
Sbjct: 209 ADRCYVLNKK 218


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 SDRCYIV 7
SD CY+V
Sbjct: 46 SDACYVV 52


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 SDRCYIV 7
SD CY+V
Sbjct: 46 SDACYVV 52


>sp|COFC_METM5|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 SDRCYIV 7
SD CY+V
Sbjct: 46 SDACYVV 52


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RCYIVGSQ 10
RC ++GS+
Sbjct: 178 RCIVIGSE 185


>sp|KTHY_METTH|PROBABLE thymidylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 SDRCY 5
SDRCY
Sbjct: 90 SDRCY 94


>sp|RIMK_METBU|PROBABLE alpha-L-glutamate ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 RCYIVGSQ 10
RC+++G +
Sbjct: 189 RCFVIGGK 196


>sp|Y1505_METJA|PUTATIVE ATP-dependent RNA helicase MJ1505|Methanocaldococcus jannaschii

Query: 2 DRCYIVG 8
D+C+I+G
Sbjct: 157 DKCHILG 163


>sp|EF2_METMJ|ELONGATION factor 2|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CYIVGS 9
CYI+G+
Sbjct: 324 CYIIGA 329


>sp|Y740_ARCFU|PUTATIVE uncharacterized protein AF_0740|Archaeoglobus fulgidus (strain ATCC

Query: 4 CYIVGS 9
CY+VG+
Sbjct: 168 CYVVGN 173




4|SequenceR|25|16|SSSEDSDRCY

>sp|PPS_METMA|4-PHOSPHOPANTOATE--BETA-ALANINE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 EDSDRC 9
ED DRC
Sbjct: 160 EDGDRC 165




5|SequenceR|30|21|TTQRPSSSED

***** No hits found ******


6|SequenceR|35|26|GQSVSTTQRP

>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GQSVSTTQRP 10
G +VSTTQ P
Sbjct: 466 GINVSTTQSP 475


>sp|AROC_METTP|CHORISMATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GQSVSTTQR 9
GQS +TT+R
Sbjct: 52 GQSTATTER 60




7|SequenceR|40|31|LPAAPGQSVS

>sp|OTC_METS3|ORNITHINE carbamoyltransferase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LPAAPGQSVS 10
LPA GQ VS
Sbjct: 261 LPAIRGQEVS 270


>sp|Y2170_ARCFU|KELCH domain-containing protein AF_2170|Archaeoglobus fulgidus (strain

Query: 1 LPAAPGQSVS 10
LP A GQ+V+
Sbjct: 263 LPVARGQAVA 272


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 2 PAAPGQS 8
PAAPG S
Sbjct: 75 PAAPGPS 81




8|SequenceR|45|36|VFLGPLPAAP

>sp|MTD_METVS|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VFLGPLPAAP 10
V++GP PAAP
Sbjct: 64 VYIGPNPAAP 73


>sp|MTD_METM5|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VFLGPLPAAP 10
V++GP PAAP
Sbjct: 65 VYIGPNPAAP 74


>sp|MTD_METMP|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VFLGPLPAAP 10
V++GP PAAP
Sbjct: 65 VYIGPNPAAP 74


>sp|MTD_METM7|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VFLGPLPAAP 10
V++GP PAAP
Sbjct: 65 VYIGPNPAAP 74


>sp|MTD_METJA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanocaldococcus

Query: 1 VFLGPLPAAP 10
+++GP PAAP
Sbjct: 65 IYIGPNPAAP 74


>sp|MTD_META3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanococcus

Query: 1 VFLGPLPAAP 10
+++GP PAAP
Sbjct: 65 IYVGPNPAAP 74


>sp|Y1250_THEVO|UPF0179 protein TV1250|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VFLGPLP 7
VF GPLP
Sbjct: 19 VFAGPLP 25


>sp|MTD_METKA|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanopyrus

Query: 1 VFLGPLPAAP 10
V+ GP PAAP
Sbjct: 69 VYGGPNPAAP 78


>sp|GSA_METTP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VFLGPLP 7
VF GPLP
Sbjct: 363 VFFGPLP 369


>sp|DGGGP_METM7|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain C7 /

Query: 1 VFLGPLP 7
VFL PLP
Sbjct: 210 VFLSPLP 216


>sp|HIS8_METTH|HISTIDINOL-PHOSPHATE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 3 LGPLPAA 9
LGP PAA
Sbjct: 51 LGPSPAA 57


>sp|Y2262_NATPD|PUTATIVE heme-binding protein NP_2262A|Natronomonas pharaonis (strain ATCC

Query: 2 FLGPLPAA 9
FLG LP A
Sbjct: 375 FLGDLPGA 382


>sp|TATCT_HALVD|SEC-INDEPENDENT protein translocase protein TatCt|Haloferax volcanii (strain ATCC

Query: 2 FLGPLPAA 9
FLG LPAA
Sbjct: 508 FLGRLPAA 515


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VFLGPLP 7
VF+GP P
Sbjct: 101 VFIGPSP 107


>sp|DGGGP_METMP|DIGERANYLGERANYLGLYCERYL phosphate synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VFLGPLP 7
+FL PLP
Sbjct: 210 IFLSPLP 216


>sp|AATI_SACS2|A-TYPE ATP synthase subunit I|Saccharolobus solfataricus (strain ATCC

Query: 2 FLGPLP 7
F GPLP
Sbjct: 412 FFGPLP 417


>sp|MTD_METS3|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanobrevibacter

Query: 1 VFLGPLPAAP 10
+F+ P P AP
Sbjct: 64 IFISPNPGAP 73


>sp|MTD_METTH|F420-DEPENDENT methylenetetrahydromethanopterin

Query: 1 VFLGPLPAAP 10
+F+ P P AP
Sbjct: 64 IFISPNPGAP 73




9|SequenceR|50|41|AADTQVFLGP

>sp|Y033_METJA|UNCHARACTERIZED FAD-dependent oxidoreductase MJ0033|Methanocaldococcus jannaschii

Query: 2 ADTQVF 7
ADTQVF
Sbjct: 375 ADTQVF 380


>sp|Y1422_METBF|MEMO1 family protein Mbar_A1422|Methanosarcina barkeri (strain Fusaro /

Query: 2 ADTQVFLGP 10
ADT V GP
Sbjct: 63 ADTYVLFGP 71


>sp|TFRA_METTM|FUMARATE reductase (CoM/CoB) subunit A|Methanothermobacter marburgensis

Query: 2 ADTQVF 7
ADTQVF
Sbjct: 388 ADTQVF 393


>sp|Y424_METJA|UNCHARACTERIZED protein MJ0424|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ADTQVFL 8
ADT+VFL
Sbjct: 80 ADTKVFL 86


>sp|Y1761_METMA|MEMO1 family protein MM_1761|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ADTQVFLGP 10
ADT V GP
Sbjct: 65 ADTYVIFGP 73


>sp|Y601_METAC|MEMO1 family protein MA_0601|Methanosarcina acetivorans (strain ATCC

Query: 2 ADTQVFLGP 10
ADT V GP
Sbjct: 65 ADTYVLFGP 73


>sp|Y2394_METBU|MEMO1 family protein Mbur_2394|Methanococcoides burtonii (strain DSM

Query: 2 ADTQVFLGP 10
ADT V GP
Sbjct: 63 ADTYVIFGP 71




10|SequenceR|55|46|PPIADAADTQ

>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 PPIADAADT 9
PPIA ADT
Sbjct: 156 PPIAVVADT 164


>sp|G1PDH_METMJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoculleus marisnigri (strain ATCC

Query: 1 PPIADAADT 9
PPIA ADT
Sbjct: 157 PPIAVVADT 165


>sp|G1PDH_METB6|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanoregula boonei (strain DSM 21154

Query: 1 PPIADAADT 9
PPIA ADT
Sbjct: 156 PPIAIIADT 164


>sp|G1PDH_METLZ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocorpusculum labreanum (strain ATCC

Query: 1 PPIADAADT 9
PP+A ADT
Sbjct: 157 PPLAIVADT 165


>sp|G1PDH_HALMA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Haloarcula marismortui (strain ATCC 43049

Query: 1 PPIADAADTQ 10
PP+A ADT+
Sbjct: 147 PPLAVIADTE 156




11|SequenceR|60|51|GSARSPPIAD

>sp|DNLJ_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SARSPPIAD 10
SAR PP+AD
Sbjct: 518 SAREPPLAD 526


>sp|ILVD_HALMA|DIHYDROXY-ACID dehydratase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SARSPPIAD 10
SAR+P IAD
Sbjct: 309 SARTPKIAD 317


>sp|Y872_METJA|UNCHARACTERIZED lipoprotein MJ0872|Methanocaldococcus jannaschii (strain ATCC

Query: 1 GSARSPPIAD 10
G+A++P I+D
Sbjct: 85 GNAKAPNISD 94




12|SequenceR|65|56|AVSPPGSARS

>sp|FDHA_METJA|F420-DEPENDENT formate dehydrogenase subunit alpha|Methanocaldococcus jannaschii

Query: 1 AVSPPGSA 8
AV+PPG A
Sbjct: 455 AVNPPGEA 462


>sp|Y006_METJA|UNCHARACTERIZED oxidoreductase MJ0006|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AVSPPGSA 8
AV+PPG A
Sbjct: 335 AVNPPGDA 342


>sp|AATA_NANEQ|A-TYPE ATP synthase subunit A|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 378 AVSPPG 383


>sp|AATA_PYRAB|A-TYPE ATP synthase subunit A|Pyrococcus abyssi (strain GE5 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 820 AVSPPG 825


>sp|AATA_PYRFU|A-TYPE ATP synthase subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 816 AVSPPG 821


>sp|AATA_PYRHO|A-TYPE ATP synthase subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 767 AVSPPG 772


>sp|AATA_STAMF|A-TYPE ATP synthase subunit A|Staphylothermus marinus (strain ATCC 43588

Query: 1 AVSPPGS 7
AVSPPG+
Sbjct: 388 AVSPPGA 394


>sp|CDC6V_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 2 VSPPGSARS 10
V PPGS ++
Sbjct: 53 VGPPGSGKT 61


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 393 AVSPPG 398


>sp|CDC6Z_METTF|ORC1-TYPE DNA replication protein|Methanothermobacter thermautotrophicus

Query: 2 VSPPGSARS 10
V PPGS ++
Sbjct: 53 VGPPGSGKT 61


>sp|AATA_ARCFU|A-TYPE ATP synthase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 391 AVSPPG 396


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 383 AVSPPG 388


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 386 AVSPPG 391


>sp|AATA_THEVO|A-TYPE ATP synthase subunit A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 572 AVSPPG 577


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 392 AVSPPG 397


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_METM6|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C6 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_HALMA|A-TYPE ATP synthase subunit A|Haloarcula marismortui (strain ATCC 43049

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 393 AVSPPG 398


>sp|AATA_METM5|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C5 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 383 AVSPPG 388


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 384 AVSPPG 389


>sp|AATA_METMP|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain DSM 14266

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_METM7|A-TYPE ATP synthase subunit A|Methanococcus maripaludis (strain C7 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_THESM|A-TYPE ATP synthase subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 388 AVSPPG 393


>sp|AATA_THESI|A-TYPE ATP synthase subunit A|Thermococcus sp. (strain KI)

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 388 AVSPPG 393


>sp|AATA_METVS|A-TYPE ATP synthase subunit A|Methanococcus vannielii (strain ATCC 35089

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_METS3|A-TYPE ATP synthase subunit A|Methanobrevibacter smithii (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_METTP|A-TYPE ATP synthase subunit A|Methanothrix thermoacetophila (strain DSM

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 383 AVSPPG 388


>sp|AATA_THEAC|A-TYPE ATP synthase subunit A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 560 AVSPPG 565


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 383 AVSPPG 388


>sp|AATA_THEKO|A-TYPE ATP synthase subunit A|Thermococcus kodakarensis (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 388 AVSPPG 393


>sp|AATA_HYPBU|A-TYPE ATP synthase subunit A|Hyperthermus butylicus (strain DSM 5456

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 393 AVSPPG 398


>sp|AATA_SULAC|A-TYPE ATP synthase subunit A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 391 AVSPPG 396


>sp|AATA_THEON|A-TYPE ATP synthase subunit A|Thermococcus onnurineus (strain NA1)

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 388 AVSPPG 393


>sp|AATA_HALSA|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 700922

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_HALS3|A-TYPE ATP synthase subunit A|Halobacterium salinarum (strain ATCC 29341

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 383 AVSPPG 388


>sp|AATA_DESSY|A-TYPE ATP synthase subunit A|Desulfurococcus sp. (strain SY)

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 388 AVSPPG 393


>sp|RAD25_HALMA|PUTATIVE DNA 3'-5' helicase Rad25|Haloarcula marismortui (strain ATCC 43049

Query: 2 VSPPGSARS 10
V PPGS ++
Sbjct: 280 VGPPGSGKT 288


>sp|AATA_THEGJ|A-TYPE ATP synthase subunit A|Thermococcus gammatolerans (strain DSM 15229

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 388 AVSPPG 393


>sp|AATA_METMJ|A-TYPE ATP synthase subunit A|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 389 AVSPPG 394


>sp|AATA_METB6|A-TYPE ATP synthase subunit A|Methanoregula boonei (strain DSM 21154

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 392 AVSPPG 397


>sp|AATA_HALWD|A-TYPE ATP synthase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 392 AVSPPG 397


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 383 AVSPPG 388


>sp|AATA_SULTO|A-TYPE ATP synthase subunit A|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 391 AVSPPG 396


>sp|AATA_METS5|A-TYPE ATP synthase subunit A|Metallosphaera sedula (strain ATCC 51363

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 391 AVSPPG 396


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 1 AVSPPG 6
A+SPPG
Sbjct: 499 AISPPG 504


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 398 AVSPPG 403


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_HALVD|A-TYPE ATP synthase subunit A|Haloferax volcanii (strain ATCC 29605

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 393 AVSPPG 398


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_THEPD|A-TYPE ATP synthase subunit A|Thermofilum pendens (strain DSM 2475

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 392 AVSPPG 397


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 398 AVSPPG 403


>sp|AATA_SACS2|A-TYPE ATP synthase subunit A|Saccharolobus solfataricus (strain ATCC

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_SACI7|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_SACI6|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.4 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_SACI4|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.14.25 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_SACI3|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain M.16.27)

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_SACI2|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|AATA_SACI1|A-TYPE ATP synthase subunit A|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 AVSPPG 6
AVSPPG
Sbjct: 390 AVSPPG 395


>sp|NUCS1_HALSA|ENDONUCLEASE NucS 1|Halobacterium salinarum (strain ATCC 700922

Query: 2 VSPPGS 7
VSPPGS
Sbjct: 232 VSPPGS 237




13|SequenceR|70|61|ARRVRAVSPP

>sp|THIC1_METTH|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 ARRVRAVSPP 10
ARR+R PP
Sbjct: 393 ARRIRDERPP 402


>sp|RSMA_PYRAE|PROBABLE ribosomal RNA small subunit|Pyrobaculum aerophilum (strain ATCC

Query: 1 ARRVRAVSPP 10
A R+R ++PP
Sbjct: 61 AERLRGIAPP 70


>sp|DP2L_THEVO|DNA polymerase II large subunit|Thermoplasma volcanium (strain ATCC

Query: 1 ARRVRAV 7
ARR+RAV
Sbjct: 964 ARRIRAV 970


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ARRVRAV 7
ARR+RAV
Sbjct: 1248 ARRIRAV 1254


>sp|DP2L_METKA|DNA polymerase II large subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 ARRVRAVS 8
ARR+RAV
Sbjct: 1116 ARRIRAVD 1123




14|SequenceR|75|66|GLETRARRVR

>sp|KCY_PYRAE|CYTIDYLATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 GLETRARRV 9
LETRARRV
Sbjct: 101 SLETRARRV 109




15|SequenceR|80|71|ASSGSGLETR

>sp|OFOA1_AERPE|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit alpha|Aeropyrum pernix (strain ATCC

Query: 2 SSGSGLET 9
+ GSGLET
Sbjct: 12 AQGSGLET 19




16|SequenceR|85|76|PAASGASSGS

>sp|STOPP_PYRHO|MEMBRANE-BOUND protease PH1510|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 PAASGASSGS 10
P AS AS+G+
Sbjct: 91 PGASAASAGT 100


>sp|ENO_ARCFU|ENOLASE fulgidus (strain ATCC 49558

Query: 2 AASGASSGS 10
A SGAS+GS
Sbjct: 35 APSGASTGS 43


>sp|Y3100_HALMA|PUTATIVE heme-binding protein rrnAC3100|Haloarcula marismortui (strain ATCC

Query: 1 PAASGASSGS 10
P ASGA +G+
Sbjct: 295 PTASGAQTGA 304




17|SequenceR|90|81|STTAAPAASG

***** No hits found ******


18|SequenceR|95|86|RRRGRSTTAA

***** No hits found ******


19|SequenceR|100|91|SSCCHRRRGR

>sp|QUEC_METTP|7-CYANO-7-DEAZAGUANINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 SCCHRRRG 9
SC HRRRG
Sbjct: 203 SCQHRRRG 210


>sp|Y1067_METMP|UNCHARACTERIZED iron-sulfur protein MMP1067|Methanococcus maripaludis (strain DSM

Query: 4 CHRRRGR 10
CH RRG+
Sbjct: 386 CHLRRGQ 392


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 4 CHRRR 8
CHRRR
Sbjct: 497 CHRRR 501


>sp|Y092_METJA|UNCHARACTERIZED iron-sulfur protein MJ0092|Methanocaldococcus jannaschii (strain

Query: 4 CHRRRGR 10
CH RRG+
Sbjct: 383 CHLRRGQ 389


>sp|GLPA1_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A1|Haloferax volcanii

Query: 3 CCHR 6
CCHR
Sbjct: 479 CCHR 482


>sp|CS3HD_THETK|CRISPR-ASSOCIATED endonuclease Cas3-HD|Thermoproteus tenax (strain ATCC 35583

Query: 2 SCCHRRRGR 10
SCC RGR
Sbjct: 2 SCCAYFRGR 10




20|SequenceR|105|96|TEAEASSCCH

>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 EASSCC 9
EAS CC
Sbjct: 164 EASECC 169




21|SequenceR|110|101|TYCTQTEAEA

>sp|PDAD_PYRAB|PYRUVOYL-DEPENDENT arginine decarboxylase|Pyrococcus abyssi (strain GE5 /

Query: 2 YCTQTEAE 9
YCT+ EAE
Sbjct: 105 YCTKEEAE 112


>sp|PDAD_THESM|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus sibiricus (strain DSM 12597

Query: 2 YCTQTEAE 9
YCT+ EAE
Sbjct: 105 YCTKEEAE 112


>sp|PDAD_THEKO|PYRUVOYL-DEPENDENT arginine decarboxylase|Thermococcus kodakarensis (strain ATCC

Query: 2 YCTQTEAE 9
YCT+ EAE
Sbjct: 104 YCTKEEAE 111




22|SequenceR|115|106|VQKVSTYCTQ

>sp|DAPAT_METJA|LL-DIAMINOPIMELATE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VQKVSTYCTQ 10
+QK YC Q
Sbjct: 288 IQKAGIYCLQ 297


>sp|MOAC_PYRAB|PROBABLE cyclic pyranopterin monophosphate synthase|Pyrococcus abyssi

Query: 1 VQKVSTYCTQ 10
V+K+ TY TQ
Sbjct: 150 VEKIKTYSTQ 159


>sp|RS10_METLZ|SMALL ribosomal subunit protein uS10|Methanocorpusculum labreanum

Query: 2 QKVSTYCTQ 10
+KV T CT+
Sbjct: 14 EKVETVCTR 22




23|SequenceR|120|111|VEASSVQKVS

>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 1 VEASSVQKVS 10
VEA S+QK +
Sbjct: 279 VEAGSIQKAN 288




24|SequenceR|125|116|MPGIRVEASS

>sp|LIPA_METAR|LIPOYL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 MPGIRVEA 8
+PG RVEA
Sbjct: 131 LPGARVEA 138


>sp|RIFK_CALMQ|RIBOFLAVIN kinase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 MPGIRVEASS 10
+PG+R+E S
Sbjct: 159 VPGVRIEGFS 168


>sp|PUR5_THEKO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PGIRVE 7
PGIRVE
Sbjct: 323 PGIRVE 328


>sp|PUR5_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 PGIRVE 7
PGIRVE
Sbjct: 323 PGIRVE 328


>sp|IF2G_SACS2|TRANSLATION initiation factor 2 subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 MPGIRVE 7
+PG+RVE
Sbjct: 256 LPGLRVE 262


>sp|IF2G_METKA|TRANSLATION initiation factor 2 subunit|Methanopyrus kandleri (strain AV19 /

Query: 2 PGIRVE 7
PGIRVE
Sbjct: 256 PGIRVE 261




25|SequenceR|130|121|DQTLRMPGIR

>sp|COBQ_PICTO|PROBABLE cobyric acid synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 DQTLRMPGI 9
DQ+L PGI
Sbjct: 198 DQSLLYPGI 206


>sp|DPCKG_METAR|GTP-DEPENDENT dephospho-CoA kinase|Methanocella arvoryzae (strain DSM 22066

Query: 1 DQTLRMP 7
DQT+R+P
Sbjct: 67 DQTMRLP 73


>sp|RNZ_PYRIL|RIBONUCLEASE Z|Pyrobaculum islandicum (strain DSM 4184

Query: 1 DQTLRMPGI 9
D TL +PG+
Sbjct: 68 DHTLGLPGL 76




26|SequenceR|135|126|LVQIPDQTLR

>sp|DNAK_HALWD|CHAPERONE protein DnaK|Haloquadratum walsbyi (strain DSM 16790

Query: 1 LVQIPDQTLR 10
++Q PDQT+R
Sbjct: 60 VIQNPDQTIR 69


>sp|PRIS_THEAC|DNA primase small subunit PriS|Thermoplasma acidophilum (strain ATCC

Query: 1 LVQIPDQTLR 10
L+QI DQT R
Sbjct: 104 LIQIRDQTER 113


>sp|AATE_THEON|A-TYPE ATP synthase subunit E|Thermococcus onnurineus (strain NA1)

Query: 1 LVQIPDQTLR 10
LV+ PD+T+R
Sbjct: 168 LVETPDRTVR 177


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 2 VQIPDQTL 9
V+IP++TL
Sbjct: 246 VEIPEETL 253




27|SequenceR|140|131|KAFILLVQIP

***** No hits found ******


28|SequenceR|145|136|SQSDEKAFIL

>sp|IF1A_METST|TRANSLATION initiation factor 1A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 QSDEKAFIL 10
QSDEKA ++
Sbjct: 84 QSDEKADVI 92


>sp|CAS2A_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas2 1|Saccharolobus solfataricus (strain ATCC

Query: 2 QSDEKAFIL 10
Q DE+ FIL
Sbjct: 63 QEDERFFIL 71




29|SequenceR|150|141|WWFGDSQSDE

>sp|AROE_SULAC|SHIKIMATE dehydrogenase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 2 WFGDSQSDE 10
WFG S SDE
Sbjct: 242 WFGKSLSDE 250


>sp|AROE_SULTO|SHIKIMATE dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 WFGDSQSDE 10
WFG S DE
Sbjct: 239 WFGKSLEDE 247


>sp|PGP_PICTO|PHOSPHOGLYCOLATE phosphatase|Picrophilus torridus (strain ATCC 700027

Query: 4 GDSQSDE 10
GDSQ+DE
Sbjct: 184 GDSQNDE 190


>sp|AROE_SACI7|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.G.57.14

Query: 2 WFGDSQSDE 10
WF S SDE
Sbjct: 248 WFNKSVSDE 256


>sp|AROE_SACI6|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.4 /

Query: 2 WFGDSQSDE 10
WF S SDE
Sbjct: 248 WFNKSVSDE 256


>sp|AROE_SACI4|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.14.25 /

Query: 2 WFGDSQSDE 10
WF S SDE
Sbjct: 248 WFNKSVSDE 256


>sp|AROE_SACI3|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain M.16.27)

Query: 2 WFGDSQSDE 10
WF S SDE
Sbjct: 248 WFNKSVSDE 256


>sp|AROE_SACI2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 WFGDSQSDE 10
WF S SDE
Sbjct: 248 WFNKSVSDE 256


>sp|AROE_SACI1|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus islandicus (strain Y.N.15.51

Query: 2 WFGDSQSDE 10
WF S SDE
Sbjct: 248 WFNKSVSDE 256


>sp|TOP6A_HALSA|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 700922

Query: 1 WWFGDSQS 8
W +GDSQS
Sbjct: 54 WVYGDSQS 61


>sp|TOP6A_HALS3|TYPE 2 DNA topoisomerase 6|Halobacterium salinarum (strain ATCC 29341

Query: 1 WWFGDSQS 8
W +GDSQS
Sbjct: 54 WVYGDSQS 61


>sp|Y1519_METJA|UNCHARACTERIZED protein MJ1519|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WWFGDSQ 7
W+FGD +
Sbjct: 878 WFFGDGK 884


>sp|EF2_CENSY|ELONGATION factor 2|Cenarchaeum symbiosum (strain A)

Query: 2 WFGDSQSD 9
W GD +SD
Sbjct: 270 WHGDLESD 277


>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 WFGDSQSDE 10
W GD +S+E
Sbjct: 271 WSGDLESEE 279


>sp|AROE_SACS2|SHIKIMATE dehydrogenase (NADP(+))|Saccharolobus solfataricus (strain ATCC

Query: 2 WFGDSQSDE 10
WF S +DE
Sbjct: 248 WFNKSVADE 256


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WWFGD 5
WW GD
Sbjct: 395 WWRGD 399


>sp|EF2_METM6|ELONGATION factor 2|Methanococcus maripaludis (strain C6 /

Query: 2 WFGDSQS 8
W GDS+S
Sbjct: 271 WKGDSES 277


>sp|PGP_METS3|PHOSPHOGLYCOLATE phosphatase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 GDSQSDE 10
GDS++DE
Sbjct: 184 GDSENDE 190


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 1 WWFGD 5
W+FGD
Sbjct: 109 WYFGD 113


>sp|DHYS_SULTO|PROBABLE deoxyhypusine synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WWFGDSQSDE 10
W FG SDE
Sbjct: 164 WEFGKRISDE 173


>sp|LEUD_THEKO|3-ISOPROPYLMALATE dehydratase small subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 WWFGDSQSDE 10
W FGD+ S +
Sbjct: 8 WRFGDNVSTD 17




30|SequenceR|155|146|ARDCAWWFGD

>sp|FLAB2_ARCFU|PROBABLE flagellin 2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DCAWWFGD 10
DC WW+ D
Sbjct: 134 DCPWWYDD 141


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 5 AWWFG 9
AWW+G
Sbjct: 258 AWWYG 262


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 AWWFG 9
AWW+G
Sbjct: 317 AWWYG 321


>sp|Y1468_METJA|UNCHARACTERIZED protein MJ1468|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CAWWFGD 10
C W FGD
Sbjct: 211 CVWSFGD 217


>sp|SRP54_NATPD|SIGNAL recognition particle 54 kDa|Natronomonas pharaonis (strain ATCC

Query: 1 ARDCAWWF 8
A AWWF
Sbjct: 114 AAKMAWWF 121


>sp|SRP54_HALWD|SIGNAL recognition particle 54 kDa|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ARDCAWWF 8
A AWWF
Sbjct: 114 AAKMAWWF 121


>sp|SRP54_HALSA|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 ARDCAWWF 8
A AWWF
Sbjct: 114 AAKMAWWF 121


>sp|SRP54_HALS3|SIGNAL recognition particle 54 kDa|Halobacterium salinarum (strain ATCC

Query: 1 ARDCAWWF 8
A AWWF
Sbjct: 114 AAKMAWWF 121


>sp|SRP54_HALMA|SIGNAL recognition particle 54 kDa|Haloarcula marismortui (strain ATCC

Query: 1 ARDCAWWF 8
A AWWF
Sbjct: 114 AAKMAWWF 121


>sp|SRP54_HALLT|SIGNAL recognition particle 54 kDa|Halorubrum lacusprofundi (strain ATCC

Query: 1 ARDCAWWF 8
A AWWF
Sbjct: 114 AAKMAWWF 121


>sp|SRP54_HALVD|SIGNAL recognition particle 54 kDa|Haloferax volcanii (strain ATCC 29605

Query: 5 AWWF 8
AWWF
Sbjct: 118 AWWF 121


>sp|RFCS_METKA|REPLICATION factor C small subunit|Methanopyrus kandleri (strain AV19 /

Query: 5 AWWFGD 10
+W+FGD
Sbjct: 108 SWYFGD 113


>sp|LEUD1_PYRFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Pyrococcus furiosus (strain ATCC

Query: 1 ARDCAWWFGD 10
AR AW +GD
Sbjct: 3 ARGRAWKYGD 12


>sp|LEUD1_METKA|3-ISOPROPYLMALATE dehydratase small subunit 1|Methanopyrus kandleri (strain AV19 /

Query: 2 RDCAWWFGD 10
R AW FGD
Sbjct: 6 RGRAWVFGD 14


>sp|RGYR_PYRAE|REVERSE gyrase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 5 AWWFGD 10
A WFGD
Sbjct: 704 AKWFGD 709


>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 5 AWWFGD 10
AW FGD
Sbjct: 5 AWKFGD 10


>sp|LEUD_METAC|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina acetivorans (strain ATCC

Query: 5 AWWFGD 10
AW FGD
Sbjct: 5 AWKFGD 10


>sp|LEUD2_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 5 AWWFGD 10
AW FGD
Sbjct: 7 AWKFGD 12


>sp|LEUD1_ARCFU|3-ISOPROPYLMALATE dehydratase small subunit 1|Archaeoglobus fulgidus (strain ATCC

Query: 5 AWWFGD 10
AW FGD
Sbjct: 4 AWKFGD 9


>sp|CARA_THEVO|CARBAMOYL phosphate synthase small chain|Thermoplasma volcanium (strain ATCC

Query: 3 DCAWWFGD 10
D W+FG+
Sbjct: 330 DTRWFFGE 337




31|SequenceR|160|151|NCRYGARDCA

>sp|Y272_METM6|UPF0251 protein MmarC6_0272|Methanococcus maripaludis (strain C6 /

Query: 1 NCRYGARDC 9
NCRYG +C
Sbjct: 114 NCRYGVSNC 122


>sp|Y986_METM5|UPF0251 protein MmarC5_0986|Methanococcus maripaludis (strain C5 /

Query: 1 NCRYGARDC 9
NCRYG +C
Sbjct: 114 NCRYGVSNC 122


>sp|Y1642_METM7|UPF0251 protein MmarC7_1642|Methanococcus maripaludis (strain C7 /

Query: 1 NCRYGARDC 9
NCRYG +C
Sbjct: 114 NCRYGVSNC 122


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 1 NCRYG 5
NCRYG
Sbjct: 297 NCRYG 301


>sp|LIPA_PICTO|LIPOYL synthase|Picrophilus torridus (strain ATCC 700027

Query: 1 NCRYGARDCA 10
NC G R CA
Sbjct: 59 NCSRGCRFCA 68


>sp|IXTPA_METKA|DITP/XTP pyrophosphatase|Methanopyrus kandleri (strain AV19 /

Query: 4 YGARDCA 10
YGAR CA
Sbjct: 48 YGARYCA 54


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 RYGARDC 9
RYG DC
Sbjct: 85 RYGGWDC 91


>sp|Y818_METJA|UNCHARACTERIZED protein MJ0818|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NCRYGAR 7
NC YG R
Sbjct: 166 NCPYGKR 172


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 CRYGARDCA 10
C YG R C
Sbjct: 446 CIYGTRMCG 454




32|SequenceR|165|156|PTRAINCRYG

>sp|Y986_METM5|UPF0251 protein MmarC5_0986|Methanococcus maripaludis (strain C5 /

Query: 3 RAINCRYG 10
R NCRYG
Sbjct: 111 RGRNCRYG 118


>sp|Y272_METM6|UPF0251 protein MmarC6_0272|Methanococcus maripaludis (strain C6 /

Query: 3 RAINCRYG 10
R NCRYG
Sbjct: 111 RGRNCRYG 118


>sp|Y1642_METM7|UPF0251 protein MmarC7_1642|Methanococcus maripaludis (strain C7 /

Query: 3 RAINCRYG 10
R NCRYG
Sbjct: 111 RGRNCRYG 118


>sp|PUR2_METKA|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanopyrus kandleri (strain AV19 /

Query: 6 NCRYG 10
NCRYG
Sbjct: 297 NCRYG 301


>sp|PGP_ARCFU|PHOSPHOGLYCOLATE phosphatase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RAINCR 8
RA+NCR
Sbjct: 20 RALNCR 25


>sp|GLCDH_METPS|GLUCOSE 1-dehydrogenase|Methanocella paludicola (strain DSM 17711

Query: 1 PTRAINCR 8
P R +NCR
Sbjct: 95 PERCLNCR 102


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PTRAINC 7
PT+ INC
Sbjct: 823 PTKDINC 829


>sp|RL40_METHJ|LARGE ribosomal subunit protein eL40|Methanospirillum hungatei JF-1

Query: 1 PTRAINCR 8
P RA++CR
Sbjct: 25 PVRAVSCR 32


>sp|Y1341_METJA|UNCHARACTERIZED protein MJ1341|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 RAINCRYG 10
+ +NC YG
Sbjct: 162 KILNCEYG 169




33|SequenceR|170|161|ELASEPTRAI

>sp|RL1_METBF|LARGE ribosomal subunit protein uL1|Methanosarcina barkeri (strain

Query: 1 ELASEPTRA 9
ELAS+ TRA
Sbjct: 88 ELASDKTRA 96


>sp|PURL_HALMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Haloarcula marismortui (strain ATCC 43049

Query: 1 ELASEPTRA 9
E+ EPTRA
Sbjct: 14 EIGREPTRA 22




34|SequenceR|175|166|KDLFCELASE

>sp|GLYA_THEON|SERINE hydroxymethyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 DLFCEL 7
DLFC+L
Sbjct: 77 DLFCKL 82


>sp|CREN1_PYRCJ|CRENACTIN calidifontis (strain DSM 21063

Query: 2 DLFCELASE 10
D++ ELASE
Sbjct: 145 DIYDELASE 153


>sp|KCY_HALWD|CYTIDYLATE kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 DLFCELASE 10
D+F ELA+E
Sbjct: 33 DIFRELAAE 41


>sp|ARLY_META3|ARGININOSUCCINATE lyase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 DLFCELA 8
D+FC++A
Sbjct: 39 DIFCDIA 45


>sp|PELO_HALMA|PROTEIN pelota homolog|Haloarcula marismortui (strain ATCC 43049

Query: 1 KDLFCELAS 9
K+LF ELAS
Sbjct: 177 KELFDELAS 185


>sp|COMDE_METAC|SULFOPYRUVATE decarboxylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 DLFCELASE 10
D C LASE
Sbjct: 204 DAICTLASE 212




35|SequenceR|180|171|IIEHHKDLFC

>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 IIEHHKD 7
+IEHH+D
Sbjct: 581 LIEHHQD 587


>sp|RIBL_METB6|FAD synthase|Methanoregula boonei (strain DSM 21154

Query: 1 IIEHHKDLFC 10
I+ H D+FC
Sbjct: 70 ILGDHTDMFC 79


>sp|RS17E_METBF|SMALL ribosomal subunit protein eS17|Methanosarcina barkeri (strain

Query: 1 IIEHHKDLF 9
++E+H+D+F
Sbjct: 16 LLENHRDVF 24


>sp|RAD50_THEAC|DNA double-strand break repair Rad50|Thermoplasma acidophilum (strain

Query: 1 IIEHHKDLF 9
II HH++L
Sbjct: 866 IISHHRELL 874


>sp|GLYA_KORCO|SERINE hydroxymethyltransferase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 IIEHHK 6
I+EHHK
Sbjct: 14 ILEHHK 19


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 IIEHHKD 7
++EHH D
Sbjct: 266 LVEHHSD 272


>sp|Y2147_ARCFU|UNCHARACTERIZED protein AF_2147|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 IIEHHKDLFC 10
IIEH + C
Sbjct: 129 IIEHENGILC 138


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IIEHHKD 7
+++HH+D
Sbjct: 268 VLDHHRD 274


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 1 IIEHHKD 7
+++HH+D
Sbjct: 268 VLDHHRD 274


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IIEHHKD 7
++EH+KD
Sbjct: 23 LVEHYKD 29


>sp|Y1662_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 IEHHKDLF 9
+EH KD F
Sbjct: 129 LEHKKDAF 136


>sp|IPYR_METTH|INORGANIC pyrophosphatase|Methanothermobacter thermautotrophicus (strain

Query: 3 EHHKDL 8
E+HKDL
Sbjct: 32 EYHKDL 37


>sp|PNCB_METBU|NICOTINATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 IIEHHKDL 8
+IEH+K L
Sbjct: 297 VIEHYKKL 304


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 IIEHHKDL 8
++EH++DL
Sbjct: 97 LVEHYEDL 104


>sp|Y732_METJA|UNCHARACTERIZED protein MJ0732|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IIEHHKDLFC 10
I EH KD F
Sbjct: 185 IFEHAKDYFA 194




36|SequenceR|185|176|RHDIVIIEHH

>sp|COBQ_THEGJ|PROBABLE cobyric acid synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 RHDIVIIE 8
RHD+VIIE
Sbjct: 126 RHDLVIIE 133


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RHDIVIIE 8
RHD+VIIE
Sbjct: 126 RHDLVIIE 133


>sp|SYR_METM7|ARGININE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 RHDIVIIEH 9
RH+ VI+EH
Sbjct: 110 RHEKVILEH 118


>sp|COBQ_THEKO|PROBABLE cobyric acid synthase|Thermococcus kodakarensis (strain ATCC

Query: 2 HDIVIIE 8
HD+VIIE
Sbjct: 127 HDLVIIE 133


>sp|TRKA_ARCFU|TRK system potassium uptake protein|Archaeoglobus fulgidus (strain

Query: 2 HDIVIIE 8
HD++IIE
Sbjct: 23 HDVIIIE 29


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RHDIVIIEHH 10
R I+I++HH
Sbjct: 100 RDKIIILDHH 109


>sp|TRPF_PYRAR|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 HDIVIIEHH 10
+DI +++HH
Sbjct: 73 NDIPVVQHH 81


>sp|COBQ_THEON|PROBABLE cobyric acid synthase|Thermococcus onnurineus (strain NA1)

Query: 2 HDIVIIE 8
H+IVIIE
Sbjct: 127 HEIVIIE 133


>sp|SYR_METLZ|ARGININE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 RHDIVIIEH 9
R D VIIEH
Sbjct: 105 RTDKVIIEH 113


>sp|TRKA_PYRHO|TRK system potassium uptake protein|Pyrococcus horikoshii (strain

Query: 2 HDIVIIE 8
HD+ IIE
Sbjct: 24 HDVAIIE 30


>sp|CPGS_THEKO|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus kodakarensis (strain

Query: 2 HDIVIIE 8
HD++I+E
Sbjct: 233 HDLIILE 239


>sp|CPGS_THEGJ|CYCLIC 2,3-diphosphoglycerate synthetase|Thermococcus gammatolerans

Query: 2 HDIVIIE 8
HD++I+E
Sbjct: 234 HDLIILE 240


>sp|TRKA_PYRAB|TRK system potassium uptake protein|Pyrococcus abyssi (strain GE5 /

Query: 2 HDIVIIE 8
HD+ IIE
Sbjct: 24 HDVAIIE 30




37|SequenceR|190|181|FNQTQRHDIV

>sp|Y1105_PYRIL|MEMO1 family protein Pisl_1105|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FNQTQRHDI 9
FN + HDI
Sbjct: 193 FNHYEHHDI 201


>sp|IF2P_METHJ|PROBABLE translation initiation factor IF-2|Methanospirillum hungatei JF-1

Query: 3 QTQRHDIV 10
Q RHD++
Sbjct: 396 QVSRHDVI 403


>sp|FBP_PYRFU|FRUCTOSE-1,6-BISPHOSPHATASE furiosus (strain ATCC 43587

Query: 1 FNQTQRHDIV 10
FN T R D++
Sbjct: 229 FNATDRLDVI 238




38|SequenceR|195|186|VAEADFNQTQ

>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VAEADFNQTQ 10
+AEAD+ +T+
Sbjct: 354 IAEADYRKTE 363


>sp|Y1483_METJA|UNCHARACTERIZED protein MJ1483|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VAEADFNQTQ 10
+ + DFN+T+
Sbjct: 89 IEKGDFNETE 98


>sp|GMSS1_HALMA|GLUTAMATE mutase sigma subunit 1|Haloarcula marismortui (strain ATCC 43049

Query: 1 VAEADFNQTQ 10
V ++DF +TQ
Sbjct: 99 VGQSDFEETQ 108


>sp|CSG_METTL|S-LAYER protein|Methanothermococcus thermolithotrophicus

Query: 1 VAEADFNQTQ 10
V +ADFN T
Sbjct: 149 VNDADFNATS 158




39|SequenceR|200|191|RISRCVAEAD

>sp|AROA_METTH|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanothermobacter thermautotrophicus

Query: 1 RISRCVAE 8
RIS C AE
Sbjct: 336 RISTCAAE 343




40|SequenceR|205|196|SPNTARISRC

***** No hits found ******


41|SequenceR|210|201|IVTHESPNTA

>sp|IMDH_PYRHO|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVTHESPN 8
I+T+E+PN
Sbjct: 473 IITNEAPN 480


>sp|IMDH_PYRAB|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 IVTHESPN 8
I+T+E+PN
Sbjct: 473 IITNEAPN 480


>sp|IMDH_PYRFU|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVTHESPN 8
I+T+E+PN
Sbjct: 473 IITNEAPN 480


>sp|DTDA_PYRAR|D-AMINOACYL-TRNA deacylase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 THESPNTA 10
TH +PNTA
Sbjct: 121 THHTPNTA 128


>sp|RL2_METBF|LARGE ribosomal subunit protein uL2|Methanosarcina barkeri (strain Fusaro

Query: 1 IVTHESPNTA 10
+VTHES TA
Sbjct: 129 VVTHESNRTA 138


>sp|IMDH_METJA|INOSINE-5'-MONOPHOSPHATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVTHESPN 8
I+T+E+PN
Sbjct: 484 IITNEAPN 491


>sp|PPAC_METTP|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanothrix thermoacetophila (strain

Query: 1 IVTHESPNT 9
+V H+SP+T
Sbjct: 7 VVGHKSPDT 15


>sp|RL2_METAC|LARGE ribosomal subunit protein uL2|Methanosarcina acetivorans (strain

Query: 1 IVTHESPNTA 10
+VTHE+ TA
Sbjct: 129 VVTHEATRTA 138


>sp|DTDA_PYRAE|D-AMINOACYL-TRNA deacylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 THESPNTA 10
TH +PNT+
Sbjct: 120 THHAPNTS 127


>sp|DTDA_PYRIL|D-AMINOACYL-TRNA deacylase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 THESPNTA 10
TH +PNT+
Sbjct: 121 THHTPNTS 128




42|SequenceR|215|206|SVVALIVTHE

>sp|SYL1_SACS2|LEUCINE--TRNA ligase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 VVALIVTHE 10
VVAL+V H+
Sbjct: 231 VVALMVNHD 239




43|SequenceR|220|211|DDSVRSVVAL

>sp|HIS8_METMP|HISTIDINOL-PHOSPHATE aminotransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DDSVRSVV 8
DD VRS+V
Sbjct: 4 DDKVRSIV 11


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 1 DDSVRSVV 8
DD +RSV+
Sbjct: 170 DDEIRSVI 177




44|SequenceR|225|216|SAEEHDDSVR

>sp|PDXT_METM7|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 EEHDDSVR 10
EEH+D+VR
Sbjct: 14 EEHEDAVR 21


>sp|PDXT_METM5|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 EEHDDSVR 10
EEH+D+VR
Sbjct: 14 EEHEDAVR 21


>sp|PDXT_METM6|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 EEHDDSVR 10
EEH+D+V+
Sbjct: 14 EEHEDAVK 21


>sp|PDXT_METMP|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Methanococcus maripaludis

Query: 3 EEHDDSVR 10
EEH+D+V+
Sbjct: 14 EEHEDAVK 21


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 SAEEHDDSVR 10
SAE DD+VR
Sbjct: 459 SAESGDDTVR 468


>sp|GATE_NATPD|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Natronomonas pharaonis (strain ATCC

Query: 3 EEHDDSV 9
EEHDD V
Sbjct: 167 EEHDDGV 173


>sp|Y1416_METJA|UNCHARACTERIZED protein MJ1416|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SAEEHDDS 8
SAEE DD+
Sbjct: 112 SAEEQDDA 119




45|SequenceR|230|221|LLPLVSAEEH

>sp|RS2_METLZ|SMALL ribosomal subunit protein uS2|Methanocorpusculum labreanum

Query: 3 PLVSAEEH 10
PLVS EE+
Sbjct: 13 PLVSVEEY 20


>sp|CARA_METJA|CARBAMOYL phosphate synthase small chain|Methanocaldococcus jannaschii

Query: 1 LLPLVSAEE 9
L+PLVS +E
Sbjct: 151 LVPLVSTKE 159


>sp|RS2_METHJ|SMALL ribosomal subunit protein uS2|Methanospirillum hungatei JF-1

Query: 3 PLVSAEEH 10
PLVS EE+
Sbjct: 13 PLVSVEEY 20


>sp|Y419_ARCFU|UNCHARACTERIZED protein AF_0419|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LLPLVSAEEH 10
LLPL + EH
Sbjct: 11 LLPLPGSPEH 20


>sp|PYRE_METMA|OROTATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LLPLVSAEE 9
L+PLVSA +
Sbjct: 176 LVPLVSASD 184


>sp|PUR2_METST|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 LLPLVSAEEH 10
L+P+ +A++H
Sbjct: 207 LIPMPAAQDH 216




46|SequenceR|235|226|NFGAHLLPLV

>sp|TIAS_METLZ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanocorpusculum labreanum

Query: 4 AHLLPL 9
AHLLPL
Sbjct: 253 AHLLPL 258


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 3 GAHLLP 8
GAHL+P
Sbjct: 197 GAHLVP 202


>sp|ARCSA_THEAC|ARCHAEOSINE synthase subunit alpha|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 FGAHLLPLV 10
FG +LPLV
Sbjct: 391 FGEWILPLV 399


>sp|Y866_ARCFU|UNCHARACTERIZED sugar kinase AF_0866|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 NFGAHLL 7
+FGAHL+
Sbjct: 441 SFGAHLV 447


>sp|ARGC_METKA|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanopyrus kandleri (strain AV19 /

Query: 1 NFGAHLLPLV 10
+F HL PLV
Sbjct: 228 HFTPHLAPLV 237




47|SequenceR|240|231|EMFRRNFGAH

>sp|SYS_METLZ|SERINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 262 FRREIGAH 269


>sp|SYS_METB6|SERINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 262 FRREIGAH 269


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 262 FRREIGAH 269


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 262 FRREIGAH 269


>sp|RL18_PYRFU|LARGE ribosomal subunit protein uL18|Pyrococcus furiosus (strain ATCC

Query: 1 EMFRRNFGAH 10
E FRR FG +
Sbjct: 162 EKFRRQFGGY 171


>sp|RL18_PYRAB|LARGE ribosomal subunit protein uL18|Pyrococcus abyssi (strain GE5 /

Query: 1 EMFRRNFGAH 10
E FRR FG +
Sbjct: 162 EKFRRQFGGY 171


>sp|RRP4_NITMS|EXOSOME complex component Rrp4|Nitrosopumilus maritimus (strain SCM1)

Query: 1 EMFRRNFGAH 10
++F R+F AH
Sbjct: 92 DVFGRDFSAH 101


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 279 FRREAGAH 286


>sp|SYS_THEVO|SERINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 280 FRREAGAH 287


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FRRNFGAH 10
FRR G+H
Sbjct: 262 FRREIGSH 269


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FRRNFGAH 10
FRR GAH
Sbjct: 280 FRREAGAH 287


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 MFRRNFGA 9
+ R+NFGA
Sbjct: 269 IMRKNFGA 276


>sp|RL18_PYRHO|LARGE ribosomal subunit protein uL18|Pyrococcus horikoshii (strain ATCC

Query: 1 EMFRRNFGAH 10
+ FRR FG +
Sbjct: 162 DRFRRQFGGY 171


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 2 MFRRNFGA 9
+ R+NFGA
Sbjct: 269 IMRKNFGA 276




48|SequenceR|245|236|IISSNEMFRR

>sp|KCY_METMA|CYTIDYLATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 IISSNEMFRR 10
+ISS E+FRR
Sbjct: 28 LISSGEIFRR 37


>sp|KCY_METBF|CYTIDYLATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 IISSNEMFRR 10
+ISS E+FRR
Sbjct: 28 LISSGEIFRR 37


>sp|KCY_METAC|CYTIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 IISSNEMFRR 10
+ISS E+FRR
Sbjct: 28 LISSGEIFRR 37




49|SequenceR|250|241|ENYCAIISSN

>sp|DACZ_METJA|DIADENYLATE cyclase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ENYCAIISS 9
+N C IISS
Sbjct: 92 DNRCMIISS 100


>sp|Y963_METJA|UNCHARACTERIZED protein MJ0963|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CAIISSN 10
CAI+SSN
Sbjct: 41 CAILSSN 47


>sp|CBIT_METS3|PROBABLE cobalt-precorrin-6B C(15)-methyltransferase

Query: 1 ENYCAIISSN 10
EN AIIS+N
Sbjct: 176 ENPIAIISAN 185


>sp|THIC2_METST|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 NYCAI 6
NYCAI
Sbjct: 413 NYCAI 417


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ENYCAII 7
+NYC+I+
Sbjct: 9 QNYCSIL 15




50|SequenceR|255|246|EIQILENYCA

>sp|TRPG2_HALMA|ANTHRANILATE synthase component II|Haloarcula marismortui (strain ATCC 43049

Query: 3 QILENYC 9
QI+EN+C
Sbjct: 178 QIVENFC 184


>sp|BAX1_ARCFU|ENDONUCLEASE Bax1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IQILENYC 9
I++LEN+C
Sbjct: 67 IRVLENHC 74


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EIQILENY 8
EI I+ENY
Sbjct: 37 EITIIENY 44


>sp|AROD_SULTO|3-DEHYDROQUINATE dehydratase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EIQILENY 8
EIQ++E Y
Sbjct: 40 EIQVIEKY 47


>sp|CBID_ARCFU|COBALT-PRECORRIN-5B C(1)-methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 EIQILENY 8
++QILEN+
Sbjct: 136 KLQILENF 143


>sp|HEM1_SACS2|GLUTAMYL-TRNA reductase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|HEM1_SACI7|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|HEM1_SACI6|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.4 /

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|HEM1_SACI4|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.14.25 /

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|HEM1_SACI3|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|HEM1_SACI2|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|HEM1_SACI1|GLUTAMYL-TRNA reductase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 3 QILENYCA 10
++L+NYC+
Sbjct: 6 ELLQNYCS 13


>sp|RRP42_THEAC|EXOSOME complex component Rrp42|Thermoplasma acidophilum (strain ATCC

Query: 1 EIQILENY 8
E+ I+ENY
Sbjct: 37 ELTIIENY 44


>sp|Y1598_METJA|UPF0284 protein MJ1598|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EIQILENYC 9
+I+ L+NYC
Sbjct: 301 KIEGLKNYC 309


>sp|RIBL_METEZ|FAD synthase|Methanohalobium evestigatum (strain ATCC BAA-1072

Query: 3 QILENYC 9
+ILE YC
Sbjct: 144 RILERYC 150




51|SequenceR|260|251|RVEGHEIQIL

>sp|AGLP_HALVD|HEXURONIC acid methyltransferase AglP|Haloferax volcanii (strain ATCC 29605

Query: 2 VEGHEIQIL 10
VEGHE+++L
Sbjct: 175 VEGHELEVL 183


>sp|IF2P_METMJ|PROBABLE translation initiation factor IF-2|Methanoculleus marisnigri

Query: 2 VEGHEIQIL 10
+EGH+IQ++
Sbjct: 372 LEGHQIQVM 380


>sp|COBQ_PYRFU|PROBABLE cobyric acid synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVEGHEIQI 9
RVEG+EI+
Sbjct: 380 RVEGYEIRF 388


>sp|RIMK_METBU|PROBABLE alpha-L-glutamate ligase|Methanococcoides burtonii (strain DSM

Query: 4 GHEIQIL 10
GHEIQ++
Sbjct: 26 GHEIQVI 32


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum (strain

Query: 3 EGHEIQI 9
EGHE+ +
Sbjct: 159 EGHEVDV 165




52|SequenceR|265|256|LKFQSRVEGH

>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 4 QSRVEGH 10
QSRV+GH
Sbjct: 60 QSRVKGH 66


>sp|RPO10_HYPBU|DNA-DIRECTED RNA polymerase subunit Rpo10|Hyperthermus butylicus (strain DSM

Query: 2 KFQSRVEG 9
+F+SRVEG
Sbjct: 20 EFRSRVEG 27


>sp|NEP1_PYRAB|RIBOSOMAL RNA small subunit methyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 3 FQSRVEG 9
F+SRVEG
Sbjct: 190 FRSRVEG 196


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FQSRVEGH 10
F SR+E H
Sbjct: 39 FASRIEAH 46


>sp|SYE_METTP|GLUTAMATE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 LKFQSRVEGH 10
L F+S VE H
Sbjct: 282 LDFESAVEDH 291


>sp|RFCS_PYRAB|REPLICATION factor C small subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LKFQSRVEGH 10
+ F SR+ GH
Sbjct: 693 VSFNSRIVGH 702




53|SequenceR|270|261|SNCARLKFQS

>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SNCARLKFQS 10
S C R+KF++
Sbjct: 70 SECIRIKFEN 79


>sp|Y619_METMP|UPF0251 protein MMP0619|Methanococcus maripaludis (strain DSM 14266

Query: 1 SNCARLK 7
SNC RLK
Sbjct: 120 SNCLRLK 126




54|SequenceR|275|266|LATFVSNCAR

>sp|TRPE1_HALMA|ANTHRANILATE synthase component 1 1|Haloarcula marismortui (strain ATCC 43049

Query: 2 ATFVSNCAR 10
ATF S+C R
Sbjct: 204 ATFESDCTR 212




55|SequenceR|280|271|EHCHDLATFV

>sp|SYR_METB6|ARGININE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 EHCHDLAT 8
E C+DLAT
Sbjct: 465 EECYDLAT 472


>sp|Y1607_METJA|UNCHARACTERIZED glycosyltransferase MJ1607|Methanocaldococcus jannaschii (strain

Query: 2 HCHDLAT 8
HCHD T
Sbjct: 94 HCHDWMT 100


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 3 CHDLATF 9
CHD+ TF
Sbjct: 124 CHDIYTF 130


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EHCHDLATFV 10
++CHD T +
Sbjct: 163 KYCHDFLTHI 172


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EHCHDLAT 8
EH H+L T
Sbjct: 181 EHVHELKT 188


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 HCHDLAT 8
HC ++AT
Sbjct: 22 HCREIAT 28




56|SequenceR|285|276|TIEIAEHCHD

>sp|RFCL_METTP|REPLICATION factor C large subunit|Methanothrix thermoacetophila (strain DSM

Query: 3 EIAEHCH 9
+IA HCH
Sbjct: 351 KIAAHCH 357


>sp|RSMA_METTH|PROBABLE ribosomal RNA small subunit|Methanothermobacter thermautotrophicus

Query: 2 IEIAEHCHD 10
+EIAEH D
Sbjct: 260 LEIAEHIED 268


>sp|MCH_METB6|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanoregula boonei (strain DSM 21154

Query: 3 EIAEHCH 9
+IAE CH
Sbjct: 152 KIAEECH 158


>sp|BIOF_METJA|PUTATIVE 8-amino-7-oxononanoate synthase|Methanocaldococcus jannaschii

Query: 1 TIEIAEH 7
T+EIAEH
Sbjct: 316 TMEIAEH 322


>sp|GLYA_SACS2|SERINE hydroxymethyltransferase|Saccharolobus solfataricus (strain ATCC

Query: 1 TIEIAEHCH 9
T E+A+H H
Sbjct: 180 TKELAQHVH 188


>sp|YPZ8_METTF|UNCHARACTERIZED protein ORF8'|Methanothermobacter thermautotrophicus

Query: 4 IAEHCHD 10
+A+H HD
Sbjct: 178 VADHVHD 184


>sp|ARTE_METJA|PROBABLE archaeosortase E|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TIEIAEHC 8
T+E+ E C
Sbjct: 83 TVEVVEEC 90


>sp|AMYA_METJA|PUTATIVE alpha-amylase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 IEIAEHCH 9
IEIA+H H
Sbjct: 260 IEIAKHEH 267


>sp|SYDND_METLZ|ASPARTATE--TRNA(ASP/ASN) ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 IAEHCHD 10
+A+HC D
Sbjct: 253 VADHCGD 259


>sp|SYM_METS3|METHIONINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 IEIAEHCHD 10
IEIA+ HD
Sbjct: 68 IEIAKRYHD 76


>sp|CHEC1_HALS3|PUTATIVE CheY-P phosphatase CheC1|Halobacterium salinarum (strain ATCC 29341

Query: 3 EIAEHCHD 10
+IA HC D
Sbjct: 147 DIASHCVD 154




57|SequenceR|290|281|VHDDSTIEIA

>sp|COOS_ARCFU|CARBON monoxide dehydrogenase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HDDSTIEIA 10
HD ST+ IA
Sbjct: 450 HDSSTVTIA 458


>sp|ARGB_METAC|ACETYLGLUTAMATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VHDDSTIEIA 10
+ DD T+EIA
Sbjct: 85 ITDDETMEIA 94


>sp|ARGB_METMA|ACETYLGLUTAMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VHDDSTIEIA 10
+ DD T+EIA
Sbjct: 85 ITDDETMEIA 94


>sp|ARGB_METBF|ACETYLGLUTAMATE kinase|Methanosarcina barkeri (strain Fusaro /

Query: 1 VHDDSTIEIA 10
+ DD T+EIA
Sbjct: 108 ITDDETMEIA 117


>sp|ARGB_METBU|ACETYLGLUTAMATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VHDDSTIEIA 10
+ DD T+EIA
Sbjct: 93 ITDDETMEIA 102


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 HDDSTIEI 9
H DST++I
Sbjct: 11 HPDSTVKI 18




58|SequenceR|295|286|NVYQIVHDDS

>sp|Y975_PYRAB|UPF0200 protein PYRAB09750|Pyrococcus abyssi (strain GE5 /

Query: 3 YQIVHDDS 10
Y IV+DDS
Sbjct: 159 YMIVNDDS 166


>sp|Y1245_METJA|UNCHARACTERIZED protein MJ1245|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYQIVHDDS 10
VY+I+ D+S
Sbjct: 58 VYEIIRDES 66


>sp|CARB_METHJ|CARBAMOYL phosphate synthase large chain|Methanospirillum hungatei JF-1

Query: 4 QIVHDDS 10
+IVHDD+
Sbjct: 710 EIVHDDT 716


>sp|Y859_METJA|UNCHARACTERIZED protein MJ0859|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 VYQIVHDD 9
+YQ+++DD
Sbjct: 47 LYQVIYDD 54


>sp|RGYR1_AERPE|REVERSE gyrase 1|Aeropyrum pernix (strain ATCC 700893

Query: 2 VYQIVHD 8
+Y++VHD
Sbjct: 929 LYRVVHD 935


>sp|ARGC_METAC|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NVYQIVHDD 9
N+Y I H D
Sbjct: 110 NIYGIKHSD 118


>sp|MVHA_METTH|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter thermautotrophicus

Query: 1 NVYQIVHD 8
NV+QI+ D
Sbjct: 129 NVFQIIKD 136


>sp|CARB_HALSA|CARBAMOYL phosphate synthase large chain|Halobacterium salinarum (strain ATCC

Query: 4 QIVHDD 9
+IVHDD
Sbjct: 736 EIVHDD 741


>sp|MVHA_METTM|F420-NON-REDUCING hydrogenase subunit A|Methanothermobacter marburgensis (strain ATCC

Query: 1 NVYQIVHD 8
NV+QI+ D
Sbjct: 129 NVFQIIKD 136


>sp|RIFK_CENSY|RIBOFLAVIN kinase|Cenarchaeum symbiosum (strain A)

Query: 2 VYQIVHD 8
VY I+HD
Sbjct: 45 VYNILHD 51




59|SequenceR|300|291|REFAPNVYQI

>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 3 FAPNVYQ 9
FAP VYQ
Sbjct: 94 FAPTVYQ 100


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 FAPNVYQ 9
FAP VYQ
Sbjct: 97 FAPTVYQ 103


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 3 FAPNVYQ 9
FAP VYQ
Sbjct: 94 FAPTVYQ 100


>sp|PELO_NITMS|PROTEIN pelota homolog|Nitrosopumilus maritimus (strain SCM1)

Query: 2 EFAPNVY 8
EF PN+Y
Sbjct: 152 EFMPNIY 158


>sp|PYRG_METMJ|CTP synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 APNVYQI 10
AP++YQI
Sbjct: 245 APDIYQI 251


>sp|CSX1_SACS2|CRISPR system endoribonuclease Csx1|Saccharolobus solfataricus (strain

Query: 4 APNVYQ 9
APNVYQ
Sbjct: 88 APNVYQ 93


>sp|SPSS2_METBU|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanococcoides burtonii (strain DSM 6242

Query: 4 APNVYQI 10
APN+Y+I
Sbjct: 323 APNLYEI 329


>sp|PYRG_METHJ|CTP synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 APNVYQI 10
AP++YQ+
Sbjct: 245 APDIYQV 251


>sp|MAP2_SACS2|METHIONINE aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FAPNVYQ 9
F PNVY+
Sbjct: 168 FIPNVYE 174


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 1 REFAPNVYQI 10
+EF +YQI
Sbjct: 89 KEFTGKIYQI 98


>sp|MUTS_METAC|DNA mismatch repair protein MutS|Methanosarcina acetivorans (strain

Query: 1 REFAPNVY 8
+EFAP V+
Sbjct: 211 QEFAPEVF 218


>sp|Y451_ARCFU|UNCHARACTERIZED protein AF_0451|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 APNVYQI 10
APN+Y++
Sbjct: 24 APNLYEV 30


>sp|Y1185_METJA|UNCHARACTERIZED protein MJ1185|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EFAPNVY 8
E APN+Y
Sbjct: 466 EIAPNLY 472


>sp|Y1059_METJA|UNCHARACTERIZED glycosyltransferase MJ1059|Methanocaldococcus jannaschii (strain

Query: 2 EFAPNVYQI 10
+ PNVY+I
Sbjct: 172 KIVPNVYEI 180




60|SequenceR|305|296|HYGMMREFAP

>sp|MTRE_METAC|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina acetivorans (strain

Query: 1 HYGMMREF 8
HYG REF
Sbjct: 185 HYGAEREF 192


>sp|MTRE_METBU|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcoides burtonii (strain DSM

Query: 1 HYGMMREF 8
HYG REF
Sbjct: 184 HYGAEREF 191


>sp|MTRE_METBF|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina barkeri (strain Fusaro

Query: 1 HYGMMREF 8
HYG REF
Sbjct: 185 HYGAEREF 192


>sp|MTRE_METMA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanosarcina mazei (strain ATCC

Query: 1 HYGMMREF 8
HYG REF
Sbjct: 185 HYGAEREF 192


>sp|RPO1C_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Pyrobaculum aerophilum (strain ATCC

Query: 1 HYGMMREFA 9
HY +REF+
Sbjct: 78 HYAGLREFS 86


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 2 YGMMREFAP 10
YG M+++AP
Sbjct: 3 YGNMKKWAP 11


>sp|LEU1_SACS2|2-ISOPROPYLMALATE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 YGMMREFAP 10
+GM+ EF+P
Sbjct: 139 HGMIVEFSP 147


>sp|SYE_THEVO|GLUTAMATE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HYGMMR 6
HYGM+R
Sbjct: 320 HYGMIR 325


>sp|Y1724_ARCFU|UNCHARACTERIZED protein AF_1724|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGMMREFAP 10
YG +R+F P
Sbjct: 34 YGEVRDFLP 42


>sp|MTRE_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 1 HYGMMREF 8
HYG RE+
Sbjct: 186 HYGAEREY 193


>sp|MTRE_METMP|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 1 HYGMMREF 8
HYG RE+
Sbjct: 186 HYGAEREY 193


>sp|MTRE_METM7|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain C7

Query: 1 HYGMMREF 8
HYG RE+
Sbjct: 186 HYGAEREY 193


>sp|MTRE_METM5|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus maripaludis (strain C5

Query: 1 HYGMMREF 8
HYG RE+
Sbjct: 186 HYGAEREY 193


>sp|FWDC_METTM|TUNGSTEN-CONTAINING formylmethanofuran dehydrogenase 2 subunit|Methanothermobacter

Query: 3 GMMREFAP 10
GM++EF P
Sbjct: 213 GMIQEFLP 220


>sp|MTRE_META3|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanococcus aeolicus (strain ATCC

Query: 1 HYGMMREF 8
HYG RE+
Sbjct: 186 HYGAEREY 193


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 YGMMREF 8
YGM+R F
Sbjct: 79 YGMVRSF 85


>sp|KPRS_PYRAE|RIBOSE-PHOSPHATE pyrophosphokinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HYGMMREFAP 10
H G + E+AP
Sbjct: 122 HKGYVAEYAP 131


>sp|ATGT_PYRHO|TRNA-GUANINE(15) transglycosylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HYGMMREFAP 10
HY + EF P
Sbjct: 352 HYTFLEEFEP 361


>sp|ATGT_PYRAB|TRNA-GUANINE(15) transglycosylase|Pyrococcus abyssi (strain GE5 /

Query: 1 HYGMMREFAP 10
HY + EF P
Sbjct: 352 HYTFLEEFEP 361


>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 YGMMREF 8
YGM+R F
Sbjct: 79 YGMVRSF 85


>sp|RL21_THEVO|LARGE ribosomal subunit protein eL21|Thermoplasma volcanium (strain

Query: 4 MMREFAP 10
MM+EF+P
Sbjct: 31 MMQEFSP 37


>sp|MTRE_METJA|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 1 HYGMMREF 8
HYG RE+
Sbjct: 186 HYGAEREY 193


>sp|Y2124_ARCFU|UNCHARACTERIZED protein AF_2124|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 YGMMREF 8
YGM+R+F
Sbjct: 124 YGMVRDF 130


>sp|FTTA_THEKO|TRANSCRIPTION termination factor FttA|Thermococcus kodakarensis (strain ATCC

Query: 2 YGMMREFAP 10
YG +R+ AP
Sbjct: 322 YGEVRDIAP 330




61|SequenceR|310|301|LLEGKHYGMM

>sp|OTC_IGNH4|ORNITHINE carbamoyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 LLEGKHYGMM 10
LLEG+H ++
Sbjct: 42 LLEGRHLALL 51


>sp|DNLI_HALSA|DNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 2 LEGKHYGMM 10
LEG H G+M
Sbjct: 400 LEGGHEGIM 408


>sp|DNLI_HALS3|DNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 2 LEGKHYGMM 10
LEG H G+M
Sbjct: 400 LEGGHEGIM 408


>sp|DHQS_METKA|3-DEHYDROQUINATE synthase|Methanopyrus kandleri (strain AV19 /

Query: 3 EGKHYGM 9
+G+H+GM
Sbjct: 387 KGRHFGM 393


>sp|METXA_METAC|HOMOSERINE O-acetyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GKHYGM 9
GKHYG+
Sbjct: 133 GKHYGI 138


>sp|AATC_METTH|A-TYPE ATP synthase subunit C|Methanothermobacter thermautotrophicus

Query: 2 LEGKHYGMM 10
LEG YG M
Sbjct: 298 LEGTDYGQM 306


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 GKHYGM 9
G+H+GM
Sbjct: 314 GRHFGM 319


>sp|DHQS_METB6|3-DEHYDROQUINATE synthase|Methanoregula boonei (strain DSM 21154

Query: 4 GKHYGM 9
G+H+GM
Sbjct: 315 GRHFGM 320


>sp|DHQS_NITMS|3-DEHYDROQUINATE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GKHYGM 9
G+H+GM
Sbjct: 338 GRHFGM 343


>sp|FLPA_SULTO|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Sulfurisphaera tokodaii (strain

Query: 2 LEGKHYGM 9
LEGK YG+
Sbjct: 100 LEGKVYGV 107


>sp|DHQS_CENSY|3-DEHYDROQUINATE synthase|Cenarchaeum symbiosum (strain A)

Query: 4 GKHYGM 9
G+H+GM
Sbjct: 323 GRHFGM 328


>sp|Y1674_METJA|CRISPR-ASSOCIATED protein MJ1674|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEGKHYGMM 10
L+G +YGM+
Sbjct: 192 LKGIYYGML 200


>sp|MCRY_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 1 LLEGKHYGM 9
LLEG YG+
Sbjct: 184 LLEGLGYGL 192


>sp|MCRY_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 1 LLEGKHYGM 9
LLEG YG+
Sbjct: 184 LLEGLGYGL 192


>sp|MCRY_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 1 LLEGKHYGM 9
LLEG YG+
Sbjct: 184 LLEGLGYGL 192


>sp|MCRY_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LLEGKHYGM 9
LLEG YG+
Sbjct: 184 LLEGLGYGL 192


>sp|Y1127_METJA|UNCHARACTERIZED protein MJ1127|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LLEGKHYGM 9
+LEG+ YG+
Sbjct: 194 VLEGERYGI 202


>sp|G3P_PYRAE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LLEGKHYG 8
+ EGK YG
Sbjct: 337 ITEGKRYG 344




62|SequenceR|315|306|ALEKGLLEGK

>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ALEKGLLEGK 10
A+EKGLLEGK
Sbjct: 31 AVEKGLLEGK 40


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ALEKGLLEGK 10
A+EKGLLEGK
Sbjct: 31 AVEKGLLEGK 40


>sp|HELS_METBF|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina barkeri (strain Fusaro /

Query: 1 ALEKGLLEGK 10
A+EKGLLEG+
Sbjct: 31 AVEKGLLEGR 40


>sp|CYAS_METAR|CYSTEATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ALEKGLLEGK 10
A EKGLLEG+
Sbjct: 364 ASEKGLLEGR 373


>sp|HELS_SULTO|ATP-DEPENDENT DNA helicase Hel308|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALEKGLLEGK 10
A+ KGLL+GK
Sbjct: 34 AIRKGLLDGK 43


>sp|TF2B_METTL|TRANSCRIPTION initiation factor IIB|Methanothermococcus thermolithotrophicus

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 182 AVEKGLIRGR 191


>sp|HELS_PYRFU|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALEKGLLEGK 10
AL+ G+LEGK
Sbjct: 31 ALKSGILEGK 40


>sp|TF2B_METJA|TRANSCRIPTION initiation factor IIB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 516 AVEKGLIRGR 525


>sp|HELS_METB6|ATP-DEPENDENT DNA helicase Hel308|Methanoregula boonei (strain DSM 21154

Query: 2 LEKGLLEGK 10
+E+GLL+GK
Sbjct: 32 VERGLLDGK 40


>sp|HELS_SACS9|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain 98/2)

Query: 1 ALEKGLLEG 9
A++KGLLEG
Sbjct: 38 AVKKGLLEG 46


>sp|TF2B_METMP|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain DSM 14266

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 182 AVEKGLIRGR 191


>sp|HELS_THEKO|ATP-DEPENDENT DNA helicase Hel308|Thermococcus kodakarensis (strain ATCC

Query: 1 ALEKGLLEGK 10
AL+ G+LEGK
Sbjct: 31 ALKSGVLEGK 40


>sp|TF2B_METM5|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C5 /

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 182 AVEKGLIRGR 191


>sp|TF2B_META3|TRANSCRIPTION initiation factor IIB|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 177 AVEKGLIRGR 186


>sp|TF2B_METM7|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C7 /

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 182 AVEKGLIRGR 191


>sp|TF2B_METM6|TRANSCRIPTION initiation factor IIB|Methanococcus maripaludis (strain C6 /

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 182 AVEKGLIRGR 191


>sp|HPPA1_METMA|K(+)-STIMULATED pyrophosphate-energized sodium pump|Methanosarcina mazei (strain

Query: 4 KGLLEGK 10
KGL+EGK
Sbjct: 542 KGLMEGK 548


>sp|TF2B_METS3|TRANSCRIPTION initiation factor IIB|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 ALEKGLLEGK 10
A+EKGL G+
Sbjct: 247 AMEKGLTSGR 256


>sp|HELS_METAR|ATP-DEPENDENT DNA helicase Hel308|Methanocella arvoryzae (strain DSM 22066

Query: 1 ALEKGLLEGK 10
A+ +GLL+GK
Sbjct: 31 AIRQGLLDGK 40


>sp|DP2L_METLZ|DNA polymerase II large subunit|Methanocorpusculum labreanum (strain

Query: 2 LEKGLLEGK 10
LEKGLL K
Sbjct: 737 LEKGLLRAK 745


>sp|TF2B_SULAC|TRANSCRIPTION initiation factor IIB|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 149 AVEKGLVRGR 158


>sp|KADA_METTH|ADENYLATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ALEKGLLEGK 10
A+EKGL+E +
Sbjct: 40 AVEKGLVENR 49


>sp|TF2B_SULTO|TRANSCRIPTION initiation factor IIB|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 150 AVEKGLVRGR 159


>sp|RADB_THEKO|DNA repair and recombination protein|Thermococcus kodakarensis

Query: 1 ALEKGLLEGK 10
AL+ GLL GK
Sbjct: 37 ALQTGLLSGK 46


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LEKGLLEGK 10
LEKG+L K
Sbjct: 814 LEKGILRAK 822


>sp|TF2B_IGNH4|TRANSCRIPTION initiation factor IIB|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 150 AVEKGLVRGR 159


>sp|TF2B_SACSH|TRANSCRIPTION initiation factor IIB|Saccharolobus shibatae (strain ATCC 51178

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 148 AVEKGLVRGR 157


>sp|TF2B1_SACS2|TRANSCRIPTION initiation factor IIB 1|Saccharolobus solfataricus (strain ATCC

Query: 1 ALEKGLLEGK 10
A+EKGL+ G+
Sbjct: 151 AVEKGLVRGR 160


>sp|TF2B_AERPE|TRANSCRIPTION initiation factor IIB|Aeropyrum pernix (strain ATCC 700893

Query: 1 ALEKGLLEGK 10
A+EKGL G+
Sbjct: 151 AMEKGLTRGR 160


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 1 ALEKGLLEGK 10
A++KGLL+G
Sbjct: 38 AVKKGLLDGN 47


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 ALEKGLLEGK 10
LEKGLL K
Sbjct: 798 PLEKGLLRAK 807


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 ALEKGLLEGK 10
LEKGLL K
Sbjct: 801 PLEKGLLRAK 810


>sp|HELS_SACS2|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ALEKGLLEG 9
A++KGLL+G
Sbjct: 31 AVKKGLLDG 39


>sp|DP2L_PYRFU|DNA polymerase II large subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALEKGLLEGK 10
LEKGLL K
Sbjct: 799 PLEKGLLRAK 808


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 ALEKGLLEG 9
A +KGLLEG
Sbjct: 348 ARDKGLLEG 356


>sp|TYW3_THESM|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 1 ALEKGLLEG 9
ALEKGL++
Sbjct: 22 ALEKGLVDS 30


>sp|SYI_THEKO|ISOLEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ALEKGLLE 8
A EKGLLE
Sbjct: 168 AWEKGLLE 175


>sp|HELS_METBU|ATP-DEPENDENT DNA helicase Hel308|Methanococcoides burtonii (strain DSM 6242

Query: 1 ALEKGLLEGK 10
A+E GLLE K
Sbjct: 31 AIEMGLLEKK 40


>sp|SYI_PYRHO|ISOLEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALEKGLLE 8
A EKGLLE
Sbjct: 168 AWEKGLLE 175


>sp|SYI_PYRFU|ISOLEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ALEKGLLE 8
A EKGLLE
Sbjct: 168 AWEKGLLE 175


>sp|SYI_PYRAB|ISOLEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ALEKGLLE 8
A EKGLLE
Sbjct: 168 AWEKGLLE 175


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ALEKGLLEGK 10
A E+GLLE K
Sbjct: 161 AHERGLLERK 170


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ALEKGLLE 8
ALE+GLL+
Sbjct: 23 ALERGLLD 30


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 2 LEKGLLEGK 10
LEKG+L K
Sbjct: 691 LEKGILRAK 699




63|SequenceR|320|311|SKPLDALEKG

>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 2 KPLDALEKG 10
KPLDA+E+
Sbjct: 98 KPLDAVERA 106


>sp|THSA_THEKO|CHAPERONIN subunit alpha|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KPLDALEKG 10
KP D LEKG
Sbjct: 485 KPADMLEKG 493


>sp|THSA_THEK1|CHAPERONIN subunit alpha|Thermococcus sp. (strain JCM 11816

Query: 2 KPLDALEKG 10
KP D LEKG
Sbjct: 485 KPADMLEKG 493


>sp|DPOL1_SACS2|DNA polymerase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 SKPLDALEK 9
SKPLDA +K
Sbjct: 782 SKPLDAYKK 790


>sp|RPO11_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo11|Natronomonas pharaonis (strain ATCC

Query: 3 PLDALEKG 10
PLDALE+G
Sbjct: 68 PLDALEQG 75


>sp|RL18A_PYRAE|LARGE ribosomal subunit protein eL20|Pyrobaculum aerophilum (strain

Query: 2 KPLDALEKG 10
KP DA+EK
Sbjct: 25 KPYDAIEKA 33


>sp|MOAA_THEVO|PROBABLE GTP 3',8-cyclase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 PLDALEK 9
PLD+LEK
Sbjct: 204 PLDSLEK 210


>sp|RL18A_PYRNV|LARGE ribosomal subunit protein eL20|Pyrobaculum neutrophilum (strain

Query: 2 KPLDALEK 9
KP DA+EK
Sbjct: 25 KPYDAVEK 32


>sp|RL18A_PYRAR|LARGE ribosomal subunit protein eL20|Pyrobaculum arsenaticum (strain

Query: 2 KPLDALEKG 10
KP DA+EK
Sbjct: 25 KPYDAIEKA 33


>sp|RL18A_PYRCJ|LARGE ribosomal subunit protein eL20|Pyrobaculum calidifontis (strain

Query: 2 KPLDALEK 9
+P DALEK
Sbjct: 25 RPYDALEK 32


>sp|RL18A_PYRIL|LARGE ribosomal subunit protein eL20|Pyrobaculum islandicum (strain DSM

Query: 2 KPLDALEK 9
KP DA+EK
Sbjct: 25 KPYDAIEK 32


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 4 LDALEKG 10
+DALEKG
Sbjct: 346 IDALEKG 352


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 SKPLDALEK 9
SKP+DA+++
Sbjct: 386 SKPIDAIQR 394


>sp|GCH3_HALLT|GTP cyclohydrolase III|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 KPLDALE 8
+P+DALE
Sbjct: 95 RPIDALE 101


>sp|DP2L_METHJ|DNA polymerase II large subunit|Methanospirillum hungatei JF-1 (strain

Query: 1 SKPLDALEKG 10
+KP++ +EKG
Sbjct: 714 NKPVELIEKG 723


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 KPLDALE 8
KPL+ALE
Sbjct: 293 KPLEALE 299


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 4 LDALEKG 10
DALEKG
Sbjct: 430 FDALEKG 436


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 4 LDALEKG 10
LDA+EKG
Sbjct: 458 LDAIEKG 464


>sp|Y514_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0514|Methanocaldococcus jannaschii

Query: 3 PLDALEKG 10
P+DA+EK
Sbjct: 58 PVDAIEKA 65


>sp|GLCD1_CALMQ|GLUCOSE 1-dehydrogenase 1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 SKPLDALEKG 10
++PL +EKG
Sbjct: 145 TEPLSVVEKG 154


>sp|TYW3_THESM|TRNA(PHE) 7-((3-amino-3-carboxypropyl)-4-demethylwyosine(37)-N(4))-

Query: 5 DALEKG 10
DALEKG
Sbjct: 21 DALEKG 26


>sp|GLCD2_VULM7|GLUCOSE 1-dehydrogenase 2|Vulcanisaeta moutnovskia (strain 768-28)

Query: 1 SKPLDALEKG 10
++PL +EKG
Sbjct: 145 TEPLSVVEKG 154


>sp|GLCDH_THETK|GLUCOSE 1-dehydrogenase|Thermoproteus tenax (strain ATCC 35583

Query: 1 SKPLDALEKG 10
++PL +EKG
Sbjct: 145 TEPLSVVEKG 154


>sp|DPOL1_SULAC|DNA polymerase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 SKPLDALEK 9
SKPLD+ K
Sbjct: 780 SKPLDSYTK 788




64|SequenceR|325|316|ARNKDSKPLD

>sp|Y1398_METJA|UNCHARACTERIZED HTH-type transcriptional regulator MJ1398|Methanocaldococcus

Query: 1 ARNKDSKP 8
AR KD KP
Sbjct: 154 ARYKDGKP 161




65|SequenceR|330|321|TDLLDARNKD

>sp|Y376_METTP|UPF0282 protein Mthe_0376|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DLLDARNKD 10
DLL+AR K+
Sbjct: 271 DLLEARRKE 279


>sp|MTQ2_METJA|RELEASE factor glutamine methyltransferase Mtq2|Methanocaldococcus

Query: 2 DLLDARNKD 10
+L+D +NKD
Sbjct: 29 NLVDVKNKD 37


>sp|SYS_CENSY|SERINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 TDLLDARNKD 10
+D+L ARN D
Sbjct: 15 SDMLQARNVD 24




66|SequenceR|335|326|ICTNITDLLD

>sp|DPOL3_SACSH|DNA polymerase 3|Saccharolobus shibatae (strain ATCC 51178

Query: 3 TNITDLLD 10
TNITD+LD
Sbjct: 748 TNITDILD 755


>sp|DPOL3_SACS2|DNA polymerase 3|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 TNITDLLD 10
TNITD+LD
Sbjct: 749 TNITDILD 756


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 CTNITD 7
C+N+TD
Sbjct: 376 CSNVTD 381


>sp|SYS_PYRNV|SERINE--TRNA ligase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 2 CTNITD 7
C+N+TD
Sbjct: 367 CSNVTD 372


>sp|SYS_PYRIL|SERINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 CTNITD 7
C+N+TD
Sbjct: 368 CSNVTD 373


>sp|SYS_PYRCJ|SERINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 CTNITD 7
C+N+TD
Sbjct: 369 CSNVTD 374


>sp|SYS_PYRAE|SERINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 CTNITD 7
C+N+TD
Sbjct: 369 CSNVTD 374


>sp|RTCB_ARCFU|TRNA-SPLICING ligase RtcB|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ICTNITDLLD 10
+CT+ ++LD
Sbjct: 246 VCTDFLEVLD 255




67|SequenceR|340|331|EKGKKICTNI

>sp|TF2B2_SACS2|TRANSCRIPTION initiation factor IIB 2|Saccharolobus solfataricus (strain ATCC

Query: 1 EKGKKICTN 9
EKG +CTN
Sbjct: 17 EKGMYVCTN 25


>sp|SEPS_METAR|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EKGKKIC 7
E+GKK+C
Sbjct: 422 EEGKKLC 428


>sp|AMID_SACS2|AMIDASE solfataricus (strain ATCC 35092

Query: 2 KGKKIC 7
KGK+IC
Sbjct: 89 KGKRIC 94


>sp|DP2L_NATPD|DNA polymerase II large subunit|Natronomonas pharaonis (strain ATCC

Query: 1 EKGKKICTN 9
E G+ IC N
Sbjct: 736 ESGRAICPN 744


>sp|Y3856_METAC|UPF0285 protein MA_3856|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KKICTNI 10
KKICT++
Sbjct: 281 KKICTHL 287


>sp|Y638_METJA|UNCHARACTERIZED protein MJ0638|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 KGKKICTNI 10
K +KIC NI
Sbjct: 85 KERKICANI 93


>sp|UVRC_METBU|UVRABC system protein C|Methanococcoides burtonii (strain DSM 6242

Query: 2 KGKKICTN 9
KGK+ C N
Sbjct: 157 KGKRACLN 164


>sp|AATC_METJA|A-TYPE ATP synthase subunit C|Methanocaldococcus jannaschii (strain ATCC

Query: 1 EKGKKICT 8
EKGKK+ T
Sbjct: 346 EKGKKLST 353


>sp|TF2B_PYROC|TRANSCRIPTION initiation factor IIB|Pyrodictium occultum

Query: 1 EKGKKICT 8
E+G+ ICT
Sbjct: 27 ERGEYICT 34


>sp|Y394_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 EKGKKI 6
EKGKKI
Sbjct: 31 EKGKKI 36


>sp|GUAAA_METBF|GMP synthase [glutamine-hydrolyzing] subunit A|Methanosarcina barkeri

Query: 1 EKGKKICTN 9
EKG+++ TN
Sbjct: 173 EKGEELLTN 181


>sp|TRM56_METS5|TRNA (cytidine(56)-2'-O)-methyltransferase|Metallosphaera sedula (strain

Query: 1 EKGKKICTN 9
E+GKK+ N
Sbjct: 162 ERGKKVVRN 170




68|SequenceR|345|336|YVGQWEKGKK

>sp|Y1089_METJA|UNCHARACTERIZED protein MJ1089|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVGQWEKGKK 10
++ WEKG+K
Sbjct: 203 FIRAWEKGEK 212


>sp|GATE_SULTO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfurisphaera tokodaii (strain DSM

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWQKGKK 70


>sp|GATE_SULAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Sulfolobus acidocaldarius (strain ATCC

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWQKGKK 70


>sp|Y089_SULAC|MEMO1 family protein Saci_0089|Sulfolobus acidocaldarius (strain ATCC

Query: 1 YVGQWEKGK 9
YV W KGK
Sbjct: 95 YVSIWHKGK 103


>sp|GATE_SACS2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus solfataricus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|GATE_SACI7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|GATE_SACI6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|GATE_SACI4|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|GATE_SACI2|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|GATE_SACI1|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|GATE_SACI3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Saccharolobus islandicus (strain

Query: 4 QWEKGKK 10
+W+KGKK
Sbjct: 64 EWKKGKK 70


>sp|Y1071_METJA|UNCHARACTERIZED protein MJ1071|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVGQWEKGK 9
Y G WEK K
Sbjct: 295 YFGNWEKDK 303


>sp|Y04A_METJA|UNCHARACTERIZED protein MJ0047.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 WEKGK 9
WEKGK
Sbjct: 47 WEKGK 51


>sp|Y2062_SULTO|MEMO1 family protein STK_20620|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YVGQWEKGK 9
YV W KGK
Sbjct: 94 YVSLWPKGK 102


>sp|CBIMQ_METLZ|PUTATIVE fused cobalt transport protein|Methanocorpusculum labreanum (strain

Query: 1 YVGQWEKGK 9
++ WEKG+
Sbjct: 541 FIRTWEKGE 549


>sp|Y1582_ARCFU|UNCHARACTERIZED protein AF_1582|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YVGQW 5
Y+GQW
Sbjct: 62 YMGQW 66


>sp|AKSF_METJA|HOMOISOCITRATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YVGQWEKG 8
Y+G+ EKG
Sbjct: 296 YIGEKEKG 303


>sp|PYRE_THEAC|OROTATE phosphoribosyltransferase|Thermoplasma acidophilum (strain ATCC

Query: 2 VGQWEKGKK 10
VG++EKG++
Sbjct: 97 VGKFEKGEE 105


>sp|KAE1_ARCFU|TRNA N6-adenosine threonylcarbamoyltransferase|Archaeoglobus fulgidus

Query: 2 VGQWEKGKK 10
VG+W+ G +
Sbjct: 112 VGRWQTGAR 120


>sp|Y1715_METAC|UPF0280 protein MA_1715|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 YVGQWEKGKK 10
Y+G W K K
Sbjct: 230 YIGMWGKVPK 239


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 5 WEKGKK 10
WE GKK
Sbjct: 118 WELGKK 123




69|SequenceR|350|341|KRRAYYVGQW

>sp|PRIS_THEKO|DNA primase small subunit PriS|Thermococcus kodakarensis (strain ATCC

Query: 1 KRRAYYVGQW 10
+RR YY G+W
Sbjct: 12 ERRLYYSGEW 21


>sp|NADM_METTI|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanolobus tindarius

Query: 2 RRAYYVGQW 10
RRA+Y+G++
Sbjct: 2 RRAFYIGRF 10


>sp|XACH_HALVD|XYLOSE/ARABINOSE import permease protein XacH|Haloferax volcanii (strain ATCC 29605

Query: 2 RRAYYVGQW 10
RRA+ G+W
Sbjct: 278 RRAFKFGEW 286


>sp|DGGGP_THEON|DIGERANYLGERANYLGLYCERYL phosphate synthase|Thermococcus onnurineus (strain NA1)

Query: 1 KRRAYYVG 8
K+RA YVG
Sbjct: 196 KKRAAYVG 203


>sp|PRIS_METS3|DNA primase small subunit PriS|Methanobrevibacter smithii (strain

Query: 1 KRRAYYVGQW 10
+RR YY +W
Sbjct: 9 ERRQYYREEW 18


>sp|UVRC_HALMA|UVRABC system protein C|Haloarcula marismortui (strain ATCC 43049

Query: 1 KRRAYYVGQ 9
KRR YVG+
Sbjct: 29 KRRVLYVGK 37


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KRRAYYVG 8
+ RAYY G
Sbjct: 61 RERAYYAG 68


>sp|NADM_METVS|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus vannielii (strain ATCC 35089

Query: 3 RAYYVGQW 10
RA+ VG+W
Sbjct: 2 RAFIVGRW 9


>sp|NADM_METM6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 RAYYVGQW 10
RA+ +G+W
Sbjct: 2 RAFLIGRW 9


>sp|PRIS_THESM|DNA primase small subunit PriS|Thermococcus sibiricus (strain DSM

Query: 1 KRRAYYVGQW 10
+R+ YY+ +W
Sbjct: 12 ERKIYYLKEW 21


>sp|NADM_METM5|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 RAYYVGQW 10
RA+ +G+W
Sbjct: 2 RAFLIGRW 9


>sp|NADM_METM7|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 RAYYVGQW 10
RA+ +G+W
Sbjct: 2 RAFLIGRW 9


>sp|NADM_METMP|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 3 RAYYVGQW 10
RA+ +G+W
Sbjct: 2 RAFLIGRW 9


>sp|SYT_METJA|THREONINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRRAYYVGQ 9
KR+ Y+VG+
Sbjct: 412 KRKHYWVGK 420


>sp|NADM_METPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 RAYYVGQW 10
RA+Y+G++
Sbjct: 3 RAFYIGRF 10


>sp|SYV_SULAC|VALINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KRRAYYVGQW 10
+R +YY+ +W
Sbjct: 414 QRMSYYLEEW 423


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 1 KRRAYYVG 8
K +AYY+G
Sbjct: 313 KAKAYYLG 320


>sp|TDXH2_SULTO|PEROXIREDOXIN 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 YYVGQW 10
YY G+W
Sbjct: 30 YYQGKW 35


>sp|NADM_METBF|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosarcina barkeri (strain Fusaro /

Query: 3 RAYYVGQW 10
RA+Y+G++
Sbjct: 3 RAFYIGRF 10




70|SequenceR|355|346|ISDGSKRRAY

>sp|FLAB2_METVO|FLAGELLIN B2|Methanococcus voltae

Query: 1 ISDGSKRRAY 10
+SDGS +R Y
Sbjct: 101 LSDGSNKRVY 110


>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ISDGSKRRA 9
+ DGSKRR
Sbjct: 38 MPDGSKRRG 46


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ISDGSKRRA 9
+ DGSKRR
Sbjct: 39 MPDGSKRRG 47


>sp|DLHH_SACS2|PUTATIVE carboxymethylenebutenolidase|Saccharolobus solfataricus (strain

Query: 2 SDGSKRRAY 10
SDG+K RA+
Sbjct: 9 SDGAKIRAF 17


>sp|RFCS_PICTO|REPLICATION factor C small subunit|Picrophilus torridus (strain ATCC 700027

Query: 1 ISDGSKRRA 9
ISDG R+A
Sbjct: 190 ISDGDMRKA 198


>sp|DEOC_HALLT|DEOXYRIBOSE-PHOSPHATE aldolase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 ISDGSKRRA 9
+SD KRRA
Sbjct: 130 LSDDEKRRA 138


>sp|DNAJ_THEAC|CHAPERONE protein DnaJ|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ISDGSKRRAY 10
+SD KRR Y
Sbjct: 57 LSDPQKRRMY 66




71|SequenceR|360|351|KVHQQISDGS

>sp|SYV_METTH|VALINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 KVHQQISDGS 10
+VHQ + +GS
Sbjct: 692 EVHQHVGEGS 701


>sp|HELS_SULAC|ATP-DEPENDENT DNA helicase Hel308|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 KVHQQISDG 9
K+H++I+DG
Sbjct: 636 KLHKRIADG 644


>sp|DNLI_SULAC|DNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 HQQISDGS 10
HQ ISDG+
Sbjct: 401 HQAISDGT 408


>sp|DPCKG_METST|GTP-DEPENDENT dephospho-CoA kinase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KVHQQISD 8
K+HQQ+S+
Sbjct: 29 KLHQQLSE 36


>sp|RIFK_PYRFU|RIBOFLAVIN kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KVHQQISDG 9
K+H+++SD
Sbjct: 76 KLHEELSDA 84


>sp|THIC_NATPD|PHOSPHOMETHYLPYRIMIDINE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 VHQQISDG 9
V QQ++DG
Sbjct: 31 VRQQVADG 38




72|SequenceR|365|356|IVPTIKVHQQ

>sp|FAU1_PYRFU|PROBABLE ribonuclease FAU-1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IVPTIKVHQQ 10
+VPTI+ H Q
Sbjct: 264 VVPTIEGHHQ 273


>sp|FAU1_PYRAB|PROBABLE ribonuclease FAU-1|Pyrococcus abyssi (strain GE5 /

Query: 1 IVPTIKVHQQ 10
+VPTI+ H Q
Sbjct: 264 VVPTIEGHHQ 273


>sp|FAU1_CALMQ|PROBABLE ribonuclease FAU-1|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IVPTIKVHQ 9
IVPT+K H
Sbjct: 257 IVPTVKGHH 265


>sp|FAU1_PYRHO|PROBABLE ribonuclease FAU-1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 IVPTIKVHQQ 10
+VPTI+ H Q
Sbjct: 264 VVPTIEGHHQ 273


>sp|DHQS_HALMA|3-DEHYDROQUINATE synthase|Haloarcula marismortui (strain ATCC 43049

Query: 4 TIKVHQQ 10
TIKVH Q
Sbjct: 345 TIKVHTQ 351


>sp|FAU1_THEKO|PROBABLE ribonuclease FAU-1|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 IVPTIKVHQQ 10
+VPT+ H Q
Sbjct: 266 VVPTVDGHHQ 275


>sp|FAU1_PYRIL|PROBABLE ribonuclease FAU-1|Pyrobaculum islandicum (strain DSM 4184

Query: 1 IVPTIKVHQ 9
+VPTI+ H
Sbjct: 254 VVPTIRGHH 262


>sp|CIMA_METKA|PUTATIVE (R)-citramalate synthase CimA|Methanopyrus kandleri (strain AV19 /

Query: 1 IVPTIKVH 8
+VPT +VH
Sbjct: 104 VVPTSEVH 111


>sp|Y1066_METJA|UNCHARACTERIZED protein MJ1066|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IVPTIKVH 8
I PTIK H
Sbjct: 281 ITPTIKKH 288


>sp|SYA_SACI6|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|SYA_SACI4|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|SYA_SACI3|ALANINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|SYA_SACS2|ALANINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|SYA_SACI7|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|SYA_SACI2|ALANINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|SRP19_ARCFU|SIGNAL recognition particle 19 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 2 VPTIKVHQ 9
VP +K+H+
Sbjct: 29 VPNVKLHE 36


>sp|SYA_SACI1|ALANINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 4 TIKVHQQ 10
TIK+H+Q
Sbjct: 298 TIKIHRQ 304


>sp|G3P_METFE|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanothermus fervidus

Query: 1 IVPTIKVHQQ 10
IVPT +HQ
Sbjct: 212 IVPTTLMHQH 221




73|SequenceR|370|361|KGGQGIVPTI

>sp|NASC_HALMT|PROBABLE molybdenum cofactor guanylyltransferase|Haloferax mediterranei

Query: 1 KGGQGIVPTI 10
+GG G++P++
Sbjct: 128 QGGTGVIPSV 137


>sp|GYRA_HALWD|DNA gyrase subunit A|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KGGQGIVPT 9
+GG+GI+ T
Sbjct: 546 RGGKGIIGT 554


>sp|IORB_METTH|INDOLEPYRUVATE oxidoreductase subunit IorB|Methanothermobacter

Query: 2 GGQGIVPT 9
GGQGI+ T
Sbjct: 11 GGQGIIKT 18


>sp|GYRA_HALL2|DNA gyrase subunit A|Haloferax lucentense (strain DSM 14919

Query: 1 KGGQGIVPT 9
+GG+GI+ T
Sbjct: 546 RGGKGIIGT 554


>sp|SYH_METMP|HISTIDINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 KGGQGIVPTI 10
KGG+ ++P +
Sbjct: 218 KGGKEVIPIL 227


>sp|SECG_IGNH4|PREPROTEIN translocase subunit SecG|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KGGQGIVPTI 10
KGG+G+V I
Sbjct: 7 KGGEGLVTAI 16


>sp|IORB_METTM|INDOLEPYRUVATE oxidoreductase subunit IorB|Methanothermobacter marburgensis

Query: 2 GGQGIVPT 9
GGQGI+ T
Sbjct: 11 GGQGIIKT 18


>sp|GCH3_AERPE|GTP cyclohydrolase III|Aeropyrum pernix (strain ATCC 700893

Query: 1 KGGQGIVPT 9
K G GI PT
Sbjct: 204 KAGIGIAPT 212


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 2 GGQGIVPTI 10
GGQ ++P +
Sbjct: 32 GGQSLIPML 40




74|SequenceR|375|366|VFHRIKGGQG

>sp|SYV_METKA|VALINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 4 RIKGGQG 10
R+KGG+G
Sbjct: 890 RVKGGEG 896


>sp|TMG10_ARCFU|TRNA (guanine(10)-N2)-dimethyltransferase|Archaeoglobus fulgidus

Query: 4 RIKGGQG 10
R+KGG+G
Sbjct: 87 RVKGGKG 93


>sp|SYA_METHJ|ALANINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VFHRIKGG 8
+ HRI GG
Sbjct: 580 ILHRIDGG 587


>sp|PYRI_METPE|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaerula palustris

Query: 1 VFHRIKGGQG 10
V IKGG+G
Sbjct: 20 VIDHIKGGEG 29


>sp|SYA_METMJ|ALANINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 VFHRIKGG 8
+ HR+ GG
Sbjct: 578 ILHRVTGG 585


>sp|Y410_METJA|UNCHARACTERIZED ATP-binding protein MJ0410|Methanocaldococcus jannaschii (strain

Query: 2 FHRIKGGQG 10
F+ I+GG G
Sbjct: 5 FYNIQGGTG 13


>sp|NNR_METTH|BIFUNCTIONAL NAD(P)H-hydrate repair enzyme Nnr|Methanothermobacter

Query: 2 FHRIKGG 8
FHR+K G
Sbjct: 202 FHRMKDG 208




75|SequenceR|380|371|LKKLSVFHRI

>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 1 LKKLSVFHRI 10
+K LS+ HRI
Sbjct: 313 IKALSIAHRI 322


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 2 KKLSVFH 8
KKL VFH
Sbjct: 264 KKLPVFH 270


>sp|TFE_METB6|TRANSCRIPTION factor E|Methanoregula boonei (strain DSM 21154

Query: 2 KKLSVFHRI 10
K+L+ +HRI
Sbjct: 64 KRLAEYHRI 72


>sp|PGK1_METAC|PHOSPHOGLYCERATE kinase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KLSVFH 8
KLSVFH
Sbjct: 324 KLSVFH 329




76|SequenceR|385|376|DTTCCLKKLS

>sp|ASSY_METVA|ARGININOSUCCINATE synthase|Methanococcus vannielii

Query: 1 DTTCCLKKL 9
DT+CCLK L
Sbjct: 15 DTSCCLKLL 23


>sp|ASSY_METMP|ARGININOSUCCINATE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DTTCCLKKL 9
DT+CCLK L
Sbjct: 15 DTSCCLKLL 23


>sp|ASSY_METJA|ARGININOSUCCINATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DTTCCLKKL 9
DT+CCLK L
Sbjct: 14 DTSCCLKLL 22


>sp|PURL_METST|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 TCCLKKLS 10
TCCL +++
Sbjct: 261 TCCLSEMA 268


>sp|T2RM_METJA|PUTATIVE type II restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 2 TTCCLKKL 9
T CLKKL
Sbjct: 830 TKMCLKKL 837


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 3 TCCLKKL 9
TCC+ +L
Sbjct: 261 TCCISEL 267


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 3 TCCLKKL 9
TCC+ +L
Sbjct: 261 TCCISEL 267


>sp|PURL_METS3|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 TCCLKKL 9
TCC+ +L
Sbjct: 261 TCCISEL 267




77|SequenceR|390|381|IQKNNDTTCC

>sp|Y191_METTH|PUTATIVE glutamine amidotransferase MTH_191|Methanothermobacter

Query: 2 QKNNDTTC 9
+ NNDT C
Sbjct: 206 ETNNDTEC 213


>sp|GATE_METM7|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C7 /

Query: 2 QKNNDTTC 9
Q NDTTC
Sbjct: 74 QYYNDTTC 81


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 2 QKNNDTTC 9
Q NDTTC
Sbjct: 74 QYYNDTTC 81


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 2 QKNNDTTC 9
Q NDTTC
Sbjct: 74 QYYNDTTC 81


>sp|GATE_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanocaldococcus jannaschii (strain

Query: 2 QKNNDTTC 9
Q NDTTC
Sbjct: 74 QFYNDTTC 81


>sp|GATE_METVS|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus vannielii (strain ATCC

Query: 2 QKNNDTTC 9
Q NDTTC
Sbjct: 74 QYYNDTTC 81


>sp|SYG_METTP|GLYCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 KNNDTTC 9
K ND TC
Sbjct: 121 KENDITC 127


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 IQKNNDTTCC 10
+QKNN+ C
Sbjct: 574 VQKNNNGIVC 583




78|SequenceR|395|386|RHIKHIQKNN

>sp|PROB_METMA|GLUTAMATE 5-kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 KHIQKN 9
+HIQKN
Sbjct: 275 RHIQKN 280


>sp|SYA_METB6|ALANINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 1 RHIKHI 6
RH KHI
Sbjct: 643 RHFKHI 648


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 4 KHIQKN 9
+HIQKN
Sbjct: 275 RHIQKN 280


>sp|COFC_METM7|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 RHIKHIQKNN 10
+HI+ +KNN
Sbjct: 154 KHIEEAEKNN 163


>sp|PROB_METAC|GLUTAMATE 5-kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 KHIQKN 9
+HIQKN
Sbjct: 275 RHIQKN 280


>sp|COFC_METM6|2-PHOSPHO-L-LACTATE guanylyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 RHIKHIQKNN 10
+HI+ +KNN
Sbjct: 154 KHIEEAEKNN 163




79|SequenceR|400|391|NDGSDRHIKH

>sp|GLCD2_HALTV|GLUCOSE 1-dehydrogenase 2|Haloterrigena turkmenica (strain ATCC 51198

Query: 2 DGSDRHI 8
DGSDR I
Sbjct: 38 DGSDRRI 44


>sp|SYT_NANEQ|THREONINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 DGSDRHI 8
DGS++H+
Sbjct: 478 DGSEKHV 484


>sp|PRIS_SACI2|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 GSDRHIKH 10
GSD +I+H
Sbjct: 44 GSDTYIRH 51


>sp|PRIS_SACI1|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 GSDRHIKH 10
GSD +I+H
Sbjct: 44 GSDTYIRH 51


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 NDGSDRHIK 9
N G+D H++
Sbjct: 333 NQGTDHHLR 341


>sp|PRIS_SACI6|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 GSDRHIKH 10
GSD +I+H
Sbjct: 44 GSDTYIRH 51


>sp|PRIS_SACI4|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 GSDRHIKH 10
GSD +I+H
Sbjct: 44 GSDTYIRH 51


>sp|PRIS_SACI3|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 GSDRHIKH 10
GSD +I+H
Sbjct: 44 GSDTYIRH 51


>sp|PRIS_SACI7|DNA primase small subunit PriS|Saccharolobus islandicus (strain

Query: 3 GSDRHIKH 10
GSD +I+H
Sbjct: 44 GSDMYIRH 51


>sp|PRIS_SACS2|DNA primase small subunit PriS|Saccharolobus solfataricus (strain

Query: 3 GSDRHIKH 10
GSD +++H
Sbjct: 44 GSDTYVRH 51


>sp|NIFK_METMI|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 NDGSDRHIKH 10
N G R IKH
Sbjct: 184 NPGDIREIKH 193


>sp|NIFK_METMP|NITROGENASE molybdenum-iron protein beta chain|Methanococcus maripaludis

Query: 1 NDGSDRHIKH 10
N G R IKH
Sbjct: 184 NPGDIREIKH 193


>sp|COFE_HALLT|COENZYME F420:L-glutamate ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 NDGSDRHIK 9
+DGSD H +
Sbjct: 225 HDGSDNHFR 233




80|SequenceR|405|396|PETQSNDGSD

>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 2 ETQSNDGSD 10
E QSN GSD
Sbjct: 163 EIQSNLGSD 171


>sp|G1PDH_METJA|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PETQSNDG 8
P T SNDG
Sbjct: 99 PTTASNDG 106


>sp|G1PDH_META3|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus aeolicus (strain ATCC

Query: 1 PETQSNDG 8
P T SNDG
Sbjct: 102 PTTASNDG 109


>sp|G1PDH_METVS|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus vannielii (strain ATCC 35089

Query: 1 PETQSNDG 8
P T SNDG
Sbjct: 98 PTTASNDG 105


>sp|SYM_PICTO|METHIONINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PETQSNDGS 9
PE ++DGS
Sbjct: 621 PEVNADDGS 629


>sp|PRIS_HALWD|DNA primase small subunit PriS|Haloquadratum walsbyi (strain DSM 16790

Query: 2 ETQSNDGS 9
ETQSN G+
Sbjct: 186 ETQSNHGT 193


>sp|G1PDH_METM7|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C7 /

Query: 1 PETQSNDG 8
P T SNDG
Sbjct: 98 PTTASNDG 105


>sp|G1PDH_METMP|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain DSM 14266

Query: 1 PETQSNDG 8
P T SNDG
Sbjct: 98 PTTASNDG 105


>sp|G1PDH_METM5|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanococcus maripaludis (strain C5 /

Query: 1 PETQSNDG 8
P T SNDG
Sbjct: 98 PTTASNDG 105


>sp|TRUB_PICTO|PROBABLE tRNA pseudouridine synthase B|Picrophilus torridus (strain ATCC

Query: 2 ETQSNDGSD 10
ET NDG D
Sbjct: 280 ETGDNDGKD 288




81|SequenceR|410|401|YRFSHPETQS

>sp|BIOB_NATPD|BIOTIN synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 YRFSHPETQ 9
YRF HPE +
Sbjct: 270 YRFLHPEAR 278


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YRFSHPE 7
YR +HPE
Sbjct: 96 YRIAHPE 102


>sp|ADEC_ARCFU|ADENINE deaminase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RFSHPE 7
RF+HPE
Sbjct: 351 RFNHPE 356


>sp|RS27_THEGJ|SMALL ribosomal subunit protein eS27|Thermococcus gammatolerans (strain

Query: 3 FSHPETQ 9
FSHP T+
Sbjct: 30 FSHPATK 36


>sp|RS27_PYRFU|SMALL ribosomal subunit protein eS27|Pyrococcus furiosus (strain ATCC

Query: 3 FSHPETQ 9
FSHP T+
Sbjct: 28 FSHPATK 34


>sp|LONB_METJA|ARCHAEAL Lon protease|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 HPETQ 9
HPETQ
Sbjct: 404 HPETQ 408


>sp|RS27_PYRHO|SMALL ribosomal subunit protein eS27|Pyrococcus horikoshii (strain ATCC

Query: 3 FSHPETQ 9
FSHP T+
Sbjct: 30 FSHPATR 36


>sp|RS27_PYRAB|SMALL ribosomal subunit protein eS27|Pyrococcus abyssi (strain GE5 /

Query: 3 FSHPETQ 9
FSHP T+
Sbjct: 30 FSHPATR 36


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 YRFSHPE 7
Y++ HPE
Sbjct: 179 YKYPHPE 185




82|SequenceR|415|406|KRRNKYRFSH

>sp|PURL_THESM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus sibiricus (strain DSM 12597

Query: 1 KRRNKYRFSH 10
K RN+Y F +
Sbjct: 122 KERNRYLFEY 131


>sp|PURL_THEGJ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermococcus gammatolerans (strain DSM 15229

Query: 1 KRRNKYRFSH 10
K RN+Y F +
Sbjct: 122 KERNRYLFEY 131


>sp|RGYR_SACSH|REVERSE gyrase|Saccharolobus shibatae (strain ATCC 51178

Query: 3 RNKYRFSH 10
RNKY FS+
Sbjct: 226 RNKYYFSN 233


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 NKYRFS 9
NKY+FS
Sbjct: 166 NKYKFS 171


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KRRNKYRF 8
K R+KYR+
Sbjct: 165 KTRSKYRY 172


>sp|RGYR2_SACS2|REVERSE gyrase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 RNKYRFSH 10
RNKY FS+
Sbjct: 226 RNKYYFSN 233


>sp|SYE_METKA|GLUTAMATE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 RRNKYRFSH 10
RR KY F H
Sbjct: 305 RRQKYVFEH 313


>sp|CSA1_SACS2|CRISPR-ASSOCIATED exonuclease Csa1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 RRNKYRFSH 10
+ KYR++H
Sbjct: 197 KTGKYRYTH 205


>sp|SYE_PYRAB|GLUTAMATE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 RRNKYRFSH 10
R+NK+R H
Sbjct: 501 RKNKWRMIH 509




83|SequenceR|420|411|VDISEKRRNK

>sp|WECC_METVS|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VDISEKRRNK 10
VDISEKR N+
Sbjct: 38 VDISEKRVNE 47


>sp|WECC_METMP|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VDISEKRRNK 10
VD++EKR N+
Sbjct: 38 VDVNEKRVNQ 47


>sp|WECC_METM5|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 VDISEKRRNK 10
VD++EKR N+
Sbjct: 38 VDVNEKRVNQ 47


>sp|Y021_METJA|PUTATIVE glycyl-radical enzyme activating enzyme|Methanocaldococcus

Query: 3 ISEKRRNK 10
+SEKR+NK
Sbjct: 47 LSEKRKNK 54


>sp|WECC_METM7|UDP-N-ACETYL-D-MANNOSAMINE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 VDISEKRRN 9
VD++EKR N
Sbjct: 38 VDVNEKRVN 46


>sp|XPB1_SULTO|DNA 3'-5' helicase/translocase StoXPB1|Sulfurisphaera tokodaii

Query: 1 VDISEKRRNK 10
+DI RRNK
Sbjct: 38 IDIERARRNK 47


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VDISEKRR 8
VDI EKR+
Sbjct: 598 VDIGEKRQ 605




84|SequenceR|425|416|SSISKVDISE

>sp|CHEB_PYRHO|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus horikoshii

Query: 2 SISKVDISE 10
S+SK+D+ E
Sbjct: 215 SVSKIDVKE 223


>sp|CHEB_PYRAB|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Pyrococcus abyssi

Query: 2 SISKVDISE 10
S+SK+D+ E
Sbjct: 215 SVSKIDVKE 223




85|SequenceR|430|421|ADSGRSSISK

***** No hits found ******


86|SequenceR|435|426|NQLSPADSGR

>sp|DCDB_METM5|DCTP deaminase, dUMP-forming|Methanococcus maripaludis (strain C5 /

Query: 3 LSPADSG 9
LSPAD+G
Sbjct: 170 LSPADTG 176


>sp|Y119_PYRCJ|UPF0215 protein Pcal_0119|Pyrobaculum calidifontis (strain DSM 21063

Query: 3 LSPADSGR 10
+ PAD+GR
Sbjct: 141 IDPADAGR 148


>sp|HPCD_METS5|3-HYDROXYPROPIONYL-COENZYME A dehydratase|Metallosphaera sedula (strain ATCC 51363

Query: 1 NQLSPADS 8
NQL+PA++
Sbjct: 71 NQLTPAEA 78


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 LSPADSGR 10
LSP +SGR
Sbjct: 750 LSPDESGR 757




87|SequenceR|440|431|SPYRRNQLSP

>sp|DPOL_THES9|DNA polymerase|Thermococcus sp. (strain 9oN-7)

Query: 3 YRRNQLSP 10
Y+RN+L+P
Sbjct: 362 YKRNELAP 369


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 364 YERNELAP 371


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|AROA_NITMS|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 PYRRNQLSP 10
PY+R +SP
Sbjct: 212 PYKRYNISP 220


>sp|DPOL_THEFM|DNA polymerase|Thermococcus fumicolans

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_PYRHO|DNA polymerase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_THEGO|DNA polymerase|Thermococcus gorgonarius

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_PYRAB|DNA polymerase 1|Pyrococcus abyssi (strain GE5 /

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_THEG8|DNA polymerase|Thermococcus sp. (strain GE8)

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_THEKO|DNA polymerase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_PYRAY|DNA polymerase 1|Pyrococcus abyssi

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 362 YERNELAP 369


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 3 YRRNQLSP 10
Y RN+L+P
Sbjct: 364 YARNELAP 371


>sp|PRIS_NATPD|DNA primase small subunit PriS|Natronomonas pharaonis (strain ATCC

Query: 3 YRRNQLSP 10
YRR LSP
Sbjct: 17 YRRASLSP 24


>sp|CDC61_HALSA|ORC1-TYPE DNA replication protein 1|Halobacterium salinarum (strain ATCC

Query: 2 PYRRNQLSP 10
PY N+L P
Sbjct: 182 PYHENELIP 190




88|SequenceR|445|436|HIRAMSPYRR

>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 HIRAMSP 7
H+RAM+P
Sbjct: 85 HVRAMTP 91


>sp|Y1739_ARCFU|UNCHARACTERIZED protein AF_1739|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 IRAMSPYR 9
+RA+SPY+
Sbjct: 19 VRAVSPYK 26


>sp|NADM_METB6|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoregula boonei (strain DSM 21154

Query: 1 HIRAMSP 7
H+R+M+P
Sbjct: 85 HVRSMTP 91


>sp|PRIS_PYRFU|DNA primase small subunit PriS|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HIRAMSPY 8
+IRA SPY
Sbjct: 62 YIRATSPY 69


>sp|NADM_METMJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HIRAMSP 7
H+R+M+P
Sbjct: 85 HVRSMTP 91


>sp|NADM_METPE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanosphaerula palustris (strain ATCC

Query: 1 HIRAMSP 7
H+R+M+P
Sbjct: 85 HVRSMTP 91


>sp|RLMH_METTP|PUTATIVE ribosomal RNA large subunit|Methanothrix thermoacetophila (strain

Query: 1 HIRAMSPYRR 10
++R +SPY R
Sbjct: 23 YLRRLSPYTR 32




89|SequenceR|450|441|EITMSHIRAM

>sp|PUR7_METKA|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Methanopyrus kandleri (strain AV19 /

Query: 2 ITMSHIRAM 10
+ M HIRA+
Sbjct: 133 VNMDHIRAL 141


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 2 ITMSHIRAM 10
+T+SHIR +
Sbjct: 259 LTLSHIRTV 267


>sp|NADM_METHJ|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 MSHIRAM 10
+SH+RAM
Sbjct: 83 VSHVRAM 89




90|SequenceR|455|446|KTIPAEITMS

>sp|SQRD_ACIAM|SULFIDE-QUINONE reductase|Acidianus ambivalens (Desulfurolobus ambivalens)

Query: 2 TIPAEITM 9
TIPA+IT+
Sbjct: 256 TIPADITI 263


>sp|NQOR_ARCFU|NAD(P)H dehydrogenase (quinone)|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTIPAEI 7
+TIPAEI
Sbjct: 40 ETIPAEI 46




91|SequenceR|460|451|IINIVKTIPA

>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IINIVKTIP 9
I NIVK+IP
Sbjct: 242 IENIVKSIP 250


>sp|FAEHP_METBU|BIFUNCTIONAL enzyme Fae/Hps|Methanococcoides burtonii (strain DSM 6242

Query: 1 IINIVKTIP 9
I+NI+K +P
Sbjct: 187 ILNIIKQLP 195


>sp|G1PDH_THESM|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Thermococcus sibiricus (strain DSM 12597

Query: 2 INIVKTIP 9
+NI+KT P
Sbjct: 154 VNIIKTAP 161




92|SequenceR|465|456|EQAANIINIV

>sp|RF12_METAC|PEPTIDE chain release factor subunit|Methanosarcina acetivorans (strain

Query: 1 EQAANIIN 8
EQA+NII+
Sbjct: 52 EQASNIIS 59


>sp|SYM_SULTO|METHIONINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EQAANIINI 9
E+A N++NI
Sbjct: 475 EEAGNVLNI 483




93|SequenceR|470|461|TVPSNEQAAN

>sp|COME_METJA|SULFOPYRUVATE decarboxylase subunit beta|Methanocaldococcus jannaschii (strain

Query: 1 TVPSNEQAAN 10
T+P NE+ +N
Sbjct: 160 TIPYNEKCSN 169


>sp|GLNA_SULAC|GLUTAMINE synthetase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 TVPSNE 6
T+PSNE
Sbjct: 38 TIPSNE 43




94|SequenceR|475|466|LAEAVTVPSN

>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 LAEAVTVPSN 10
LA ++TVP N
Sbjct: 110 LARSITVPKN 119


>sp|Y600_THEAC|UPF0147 protein Ta0600|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 LAEAVTVPSN 10
L++ +TVP N
Sbjct: 19 LSQDITVPKN 28


>sp|DUT_HALSA|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 AEAVTVPSN 10
AE +T+P N
Sbjct: 79 AETITIPEN 87


>sp|DUT_HALS3|PROBABLE deoxyuridine 5'-triphosphate nucleotidohydrolase|Halobacterium

Query: 2 AEAVTVPSN 10
AE +T+P N
Sbjct: 79 AETITIPEN 87


>sp|QUEC_METST|7-CYANO-7-DEAZAGUANINE synthase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 EAVTVPSN 10
EAVT P N
Sbjct: 134 EAVTFPDN 141




95|SequenceR|480|471|ELVRDLAEAV

>sp|ASPD_METJA|L-ASPARTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LVRDLAEAV 10
L+RDLAE V
Sbjct: 255 LIRDLAEPV 263


>sp|T2M5_METJA|TYPE II restriction enzyme MjaV|Methanocaldococcus jannaschii (strain

Query: 1 ELVRDLAEA 9
EL+ DLA+A
Sbjct: 50 ELINDLAKA 58


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ELVRDLAEA 9
E ++DLAEA
Sbjct: 171 EAMKDLAEA 179


>sp|GSA_PYRCJ|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ELVRDLAEAV 10
E +RDLAE V
Sbjct: 341 EGIRDLAERV 350


>sp|ILVD_METJA|DIHYDROXY-ACID dehydratase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 VRDLAEAV 10
+RD+AEAV
Sbjct: 50 LRDIAEAV 57


>sp|SRP54_METLZ|SIGNAL recognition particle 54 kDa|Methanocorpusculum labreanum (strain

Query: 1 ELVRDLAEAV 10
ELVRDL A+
Sbjct: 30 ELVRDLQRAL 39


>sp|RBL_ARCFU|RIBULOSE bisphosphate carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELVRDLAE 8
E +RDLAE
Sbjct: 262 EYIRDLAE 269


>sp|OTC_HYPBU|ORNITHINE carbamoyltransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 ELVRDLAEAV 10
EL+ D AEAV
Sbjct: 214 ELIEDPAEAV 223


>sp|RL30_METTP|LARGE ribosomal subunit protein uL30|Methanothrix thermoacetophila

Query: 3 VRDLAEAV 10
+R+LAEAV
Sbjct: 92 IRELAEAV 99


>sp|GGGPS_KORCO|GERANYLGERANYLGLYCERYL phosphate synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 1 ELVRDLAEA 9
ELVR+ AEA
Sbjct: 206 ELVRERAEA 214


>sp|DPCKG_PYRAE|GTP-DEPENDENT dephospho-CoA kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELVRDLAEA 9
E+V+D+AE+
Sbjct: 2 EVVKDIAES 10




96|SequenceR|485|476|TTRLIELVRD

>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 TTRLIELVRD 10
T RLI+L+RD
Sbjct: 1417 TGRLIQLIRD 1426


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TTRLIELVRD 10
T RLI+L+RD
Sbjct: 1006 TGRLIQLIRD 1015


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 1 TTRLIELVRD 10
T RLI+L+RD
Sbjct: 1006 TGRLIQLIRD 1015


>sp|G3P_METMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 TTRLIELVRD 10
T +IEL RD
Sbjct: 258 TAEIIELARD 267


>sp|EF2_THEAC|ELONGATION factor 2|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 RLIELVRD 10
RLIE++RD
Sbjct: 405 RLIEVLRD 412


>sp|SYL_PYRAR|LEUCINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 RLIELVR 9
RL+ELVR
Sbjct: 871 RLVELVR 877


>sp|Y967_METJA|UNCHARACTERIZED protein MJ0967|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TRLIELVRD 10
T+LIELV++
Sbjct: 113 TKLIELVKE 121


>sp|G3P_THEON|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus onnurineus (strain NA1)

Query: 1 TTRLIELVRD 10
T +LIE RD
Sbjct: 256 TAQLIEFARD 265


>sp|G3P_THESM|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus sibiricus (strain DSM 12597

Query: 1 TTRLIELVRD 10
T +LIE RD
Sbjct: 256 TAQLIEFARD 265


>sp|ARGX_SULTO|GLUTAMATE--LYSW ligase ArgX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 RLIELVRD 10
RL+ L+RD
Sbjct: 135 RLVSLIRD 142


>sp|ARGX_SULAC|GLUTAMATE--LYSW ligase ArgX|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 RLIELVRD 10
RL+ L+RD
Sbjct: 135 RLVSLIRD 142


>sp|G3P_PYRWO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus woesei

Query: 1 TTRLIELVRD 10
T +LIE RD
Sbjct: 256 TAQLIEFARD 265


>sp|G3P_PYRFU|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TTRLIELVRD 10
T +LIE RD
Sbjct: 256 TAQLIEFARD 265


>sp|PUR1_PYRAB|AMIDOPHOSPHORIBOSYLTRANSFERASE abyssi (strain GE5 /

Query: 2 TRLIELVRD 10
TR+++++RD
Sbjct: 356 TRIVKMLRD 364


>sp|G3P_THEKO|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 TTRLIELVRD 10
T +LIE RD
Sbjct: 256 TAQLIEFARD 265


>sp|EF2_DESA1|ELONGATION factor 2|Desulfurococcus amylolyticus (strain DSM 18924

Query: 3 RLIELVRD 10
RL+++VRD
Sbjct: 166 RLVQIVRD 173


>sp|ENDA_PYRAR|TRNA-SPLICING endonuclease|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 TRLIELVRD 10
TRL+EL R+
Sbjct: 77 TRLVELGRE 85




97|SequenceR|490|481|PSYLETTRLI

>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PSYLETTR 8
P Y+ETT+
Sbjct: 245 PIYIETTK 252


>sp|DTDA_PYRNV|D-AMINOACYL-TRNA deacylase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 PSYLETT 7
P YLETT
Sbjct: 198 PKYLETT 204


>sp|RFCS_SULAC|REPLICATION factor C small subunit|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YLETTRLI 10
Y ETTR I
Sbjct: 129 YTETTRFI 136


>sp|GLYA_METHJ|SERINE hydroxymethyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 SYLETT 7
SYLETT
Sbjct: 2 SYLETT 7


>sp|RFCS_SULTO|REPLICATION factor C small subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YLETTRLI 10
Y ETTR I
Sbjct: 131 YTETTRFI 138


>sp|AATA_METTH|A-TYPE ATP synthase subunit A|Methanothermobacter thermautotrophicus

Query: 4 LETTRLI 10
LETTR+I
Sbjct: 491 LETTRMI 497




98|SequenceR|495|486|KTGLQPSYLE

>sp|HIS1_IGNH4|ATP phosphoribosyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 KTGLQPSYLE 10
+ G++PSYL+
Sbjct: 21 RAGIRPSYLD 30


>sp|SYM_ARCFU|METHIONINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KTGLQPSYL 9
K+GL P YL
Sbjct: 339 KSGLSPDYL 347


>sp|PURP_METAR|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanocella arvoryzae (strain DSM

Query: 1 KTGLQPSYL 9
+ GLQP+Y+
Sbjct: 250 EAGLQPTYV 258


>sp|EF1A_META3|ELONGATION factor 1-alpha|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KTGLQPSYLE 10
KTGLQP E
Sbjct: 122 KTGLQPQTRE 131


>sp|HDRA_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 1 KTGLQPSYLE 10
+ GL P YLE
Sbjct: 85 EAGLSPYYLE 94


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KTGLQPSYL 9
K G++PS+L
Sbjct: 38 KAGMEPSFL 46


>sp|LYSZ_PYRAR|PUTATIVE [LysW]-aminoadipate/[LysW]-glutamate kinase|Pyrobaculum

Query: 1 KTGLQPSYL 9
K G++P YL
Sbjct: 45 KMGIEPKYL 53


>sp|PURP_METKA|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Methanopyrus kandleri (strain AV19 /

Query: 1 KTGLQPSYL 9
+ GL+PSY+
Sbjct: 246 EAGLEPSYV 254


>sp|ENDA_PICTO|TRNA-SPLICING endonuclease|Picrophilus torridus (strain ATCC 700027

Query: 1 KTGLQPSYL 9
K G PSYL
Sbjct: 14 KNGKSPSYL 22


>sp|SYM_METTP|METHIONINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 GLQPSYL 9
GL+P YL
Sbjct: 347 GLEPDYL 353


>sp|IF6_METST|TRANSLATION initiation factor 6|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 GLQPSYLE 10
GLQ SYL+
Sbjct: 29 GLQDSYLK 36


>sp|HDRA1_METKA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanopyrus

Query: 1 KTGLQPSYLE 10
+ GL P Y+E
Sbjct: 89 EAGLSPYYME 98


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 TGLQPSYLE 10
T L P+YLE
Sbjct: 141 TYLHPTYLE 149


>sp|EF1A_METJA|ELONGATION factor 1-alpha|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KTGLQPSYLE 10
KTG+QP E
Sbjct: 122 KTGIQPQTRE 131


>sp|GLMA_THEKO|EXO-BETA-D-GLUCOSAMINIDASE kodakarensis (strain ATCC BAA-918

Query: 2 TGLQPSYLE 10
T L P+YLE
Sbjct: 139 TYLHPTYLE 147




99|SequenceR|500|491|HPDEDKTGLQ

>sp|GCH1L_PYRHO|GTP cyclohydrolase 1 type 2|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 HPDEDKTGLQ 10
+PD+ K GLQ
Sbjct: 19 YPDKSKNGLQ 28


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 HPDEDKTG 8
HPDE+K G
Sbjct: 212 HPDEEKRG 219


>sp|GCH1L_PYRAB|GTP cyclohydrolase 1 type 2|Pyrococcus abyssi (strain GE5 /

Query: 1 HPDEDKTGLQ 10
+PD+ GLQ
Sbjct: 19 YPDKSSNGLQ 28


>sp|RTCB_AERPE|TRNA-SPLICING ligase RtcB|Aeropyrum pernix (strain ATCC 700893

Query: 1 HPDEDKTGLQ 10
H D DK GL+
Sbjct: 314 HQDPDKLGLE 323


>sp|RL18E_METTH|LARGE ribosomal subunit protein eL18|Methanothermobacter

Query: 1 HPDEDKTGL 9
H DED+T L
Sbjct: 56 HSDEDETVL 64


>sp|IDI_HALSA|ISOPENTENYL-DIPHOSPHATE Delta-isomerase|Halobacterium salinarum (strain ATCC 700922

Query: 2 PDEDKTGL 9
PD+++TGL
Sbjct: 37 PDDERTGL 44


>sp|Y1407_METTH|UPF0147 protein MTH_1407|Methanothermobacter thermautotrophicus (strain

Query: 1 HPDEDKT 7
+PDED T
Sbjct: 57 NPDEDST 63


>sp|AGLI_HALVD|GLYCOSYLTRANSFERASE AglI|Haloferax volcanii (strain ATCC 29605

Query: 2 PDEDKTGL 9
PDE+ +GL
Sbjct: 253 PDEESSGL 260


>sp|RFCL_PYRAE|REPLICATION factor C large subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 HPDEDKTGL 9
H EDK GL
Sbjct: 128 HVKEDKGGL 136


>sp|RNP3_HALS3|RIBONUCLEASE P protein component 3|Halobacterium salinarum (strain ATCC 29341

Query: 1 HPDEDKT 7
HPD D T
Sbjct: 8 HPDGDST 14


>sp|COST_HALSA|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 700922

Query: 1 HPDEDKTGLQ 10
H DE TG+Q
Sbjct: 715 HADETDTGVQ 724


>sp|COST_HALS3|TRANSDUCER protein CosT|Halobacterium salinarum (strain ATCC 29341

Query: 1 HPDEDKTGLQ 10
H DE TG+Q
Sbjct: 715 HADETDTGVQ 724


>sp|PYRB_PYRFU|ASPARTATE carbamoyltransferase catalytic subunit|Pyrococcus furiosus (strain

Query: 1 HPDEDKT 7
HP+ DKT
Sbjct: 275 HPEVDKT 281




100|SequenceR|505|496|VLDSTHPDED

>sp|GCK_SULTO|GLYCERATE 2-kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLDSTHPD 8
V++STHPD
Sbjct: 83 VIESTHPD 90


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 VLDSTHP 7
+LD+THP
Sbjct: 699 ILDATHP 705


>sp|AROA_METKA|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 LDSTHPDE 9
LDS+HPD
Sbjct: 264 LDSSHPDR 271


>sp|Y298_METJA|UNCHARACTERIZED protein MJ0298|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LDSTHPDED 10
L+ HP+ED
Sbjct: 127 LNKNHPNED 135


>sp|PCP_THEKO|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 VLDSTHPDED 10
V+DST PD +
Sbjct: 84 VMDSTMPDNE 93


>sp|CRTD_HALJT|CAROTENOID 3,4-desaturase|Haloarcula japonica (strain ATCC 49778

Query: 3 DSTHPDE 9
D+THPDE
Sbjct: 270 DTTHPDE 276


>sp|PCP_THEON|PYRROLIDONE-CARBOXYLATE peptidase|Thermococcus onnurineus (strain NA1)

Query: 1 VLDSTHPDED 10
V+DST PD +
Sbjct: 84 VMDSTMPDNE 93


>sp|Y043_METJA|UNCHARACTERIZED protein MJ0043|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DSTHPD 8
D THPD
Sbjct: 42 DCTHPD 47


>sp|GCST_PYRFU|PROBABLE aminomethyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LDSTHPDED 10
L+ HPDE+
Sbjct: 208 LNPYHPDEE 216


>sp|PPSA_METJA|PROBABLE phosphoenolpyruvate synthase|Methanocaldococcus jannaschii (strain

Query: 5 THPDE 9
THPDE
Sbjct: 1031 THPDE 1035


>sp|SYT_THEON|THREONINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 LDSTHPDE 9
+D T+PDE
Sbjct: 48 VDETNPDE 55


>sp|Y1214_METKA|UPF0210 protein MK1214|Methanopyrus kandleri (strain AV19 /

Query: 1 VLDSTHPDED 10
+LD HPD +
Sbjct: 32 LLDRAHPDPE 41


>sp|SYT_THEKO|THREONINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 LDSTHPDE 9
+D T+PDE
Sbjct: 48 VDETNPDE 55


>sp|METE_THEAC|METHIONINE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 STHPDE 9
+THPDE
Sbjct: 184 TTHPDE 189


>sp|KDGK_SACS2|2-DEHYDRO-3-DEOXYGLUCONOKINASE/2-DEHYDRO-3-DEOXYGALACTONOKINASE solfataricus (strain ATCC 35092

Query: 1 VLDSTHPDE 9
+LD T PDE
Sbjct: 202 LLDVTDPDE 210


>sp|SYE_PYRAE|GLUTAMATE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DSTHPD 8
D THPD
Sbjct: 252 DLTHPD 257


>sp|METE_THEVO|METHIONINE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 STHPDE 9
+THPDE
Sbjct: 184 TTHPDE 189


>sp|GGPP_METMA|GERANYLGERANYL diphosphate synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VLDSTHPDE 9
VLD T P+E
Sbjct: 219 VLDMTAPEE 227


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VLDSTHPDE 9
VLD+ PDE
Sbjct: 666 VLDNFKPDE 674


>sp|Y912_ARCFU|UNCHARACTERIZED protein AF_0912|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VLDSTHPDE 9
V+D T P+E
Sbjct: 98 VIDDTEPEE 106




101|SequenceR|510|501|TMLGGVLDST

>sp|AIPS_METTH|ARCHAETIDYLINOSITOL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 TMLGGVLDST 10
T GG LDST
Sbjct: 82 TAFGGFLDST 91


>sp|MDH_PICTO|MALATE dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 3 LGGVLDST 10
LGG LDST
Sbjct: 149 LGGSLDST 156


>sp|RFRNP_METM7|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C7 /

Query: 1 TMLGGVLDS 9
T+ GG LDS
Sbjct: 160 TLRGGTLDS 168


>sp|RFRNP_METM6|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C6 /

Query: 1 TMLGGVLDS 9
T+ GG LDS
Sbjct: 160 TLRGGTLDS 168


>sp|RFRNP_METM5|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C5 /

Query: 1 TMLGGVLDS 9
T+ GG LDS
Sbjct: 160 TLRGGTLDS 168


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 MLGGVLD 8
++GGVLD
Sbjct: 103 LIGGVLD 109


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 3 LGGVLDST 10
LGG LD+T
Sbjct: 65 LGGYLDAT 72




102|SequenceR|515|506|RRLGDTMLGG

>sp|CHEC1_HALS3|PUTATIVE CheY-P phosphatase CheC1|Halobacterium salinarum (strain ATCC

Query: 1 RRLGDTMLGG 10
RR+ TM+GG
Sbjct: 85 RRVAGTMMGG 94


>sp|K6PF_THEKO|ADP-SPECIFIC phosphofructokinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 RLGDTMLGG 10
R+ DT+LGG
Sbjct: 320 RIEDTVLGG 328


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 199 GDTQLGG 205


>sp|DPOL_THELI|DNA polymerase|Thermococcus litoralis

Query: 1 RRLGDTMLGG 10
RRL T LGG
Sbjct: 381 RRLRTTYLGG 390


>sp|DPOL_THEAG|DNA polymerase|Thermococcus aggregans

Query: 1 RRLGDTMLGG 10
RRL T LGG
Sbjct: 381 RRLRTTYLGG 390


>sp|DNAK_THEVO|CHAPERONE protein DnaK|Thermoplasma volcanium (strain ATCC 51530

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 200 GDTQLGG 206


>sp|CSM4_THEON|CRISPR system Cms protein Csm4|Thermococcus onnurineus (strain NA1)

Query: 1 RRLGDTMLGG 10
R LGDT +GG
Sbjct: 177 RFLGDTGIGG 186


>sp|COPB_ARCFU|COPPER-EXPORTING P-type ATPase B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 RRLGDTMLGG 10
++ GDT++GG
Sbjct: 250 KKPGDTVIGG 259


>sp|K6PF_THEZI|ADP-SPECIFIC phosphofructokinase|Thermococcus zilligii

Query: 2 RLGDTMLGG 10
R+ DT+LGG
Sbjct: 320 RIEDTVLGG 328


>sp|Y423_METJA|UNCHARACTERIZED ATP-binding protein MJ0423|Methanocaldococcus jannaschii (strain

Query: 1 RRLGDTML 8
RR+G TML
Sbjct: 35 RRVGKTML 42


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 2 RLGDTMLGG 10
RLGDT+ G
Sbjct: 172 RLGDTVKAG 180


>sp|PRIL_THEAC|DNA primase large subunit PriL|Thermoplasma acidophilum (strain ATCC

Query: 1 RRLGDTMLGG 10
RR+ DT + G
Sbjct: 16 RRIADTTISG 25


>sp|DNAK_THEAC|CHAPERONE protein DnaK|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 199 GDTRLGG 205


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 1 RRLGDTMLGG 10
+R+G T +GG
Sbjct: 127 KRVGKTAIGG 136


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 199 GDTQLGG 205


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 RLGDTMLGG 10
RLGDT G
Sbjct: 172 RLGDTFKAG 180


>sp|DNAK_METTH|CHAPERONE protein DnaK|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 202 GDTQLGG 208


>sp|DNAK_METAR|CHAPERONE protein DnaK|Methanocella arvoryzae (strain DSM 22066

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 194 GDTQLGG 200


>sp|DNAK_PICTO|CHAPERONE protein DnaK|Picrophilus torridus (strain ATCC 700027

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 199 GDTHLGG 205


>sp|DNAK_METTP|CHAPERONE protein DnaK|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 198 GDTQLGG 204


>sp|DNAK_METMZ|CHAPERONE protein DnaK|Methanosarcina mazei (Methanosarcina frisia)

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 196 GDTHLGG 202


>sp|DNAK_METMA|CHAPERONE protein DnaK|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 196 GDTHLGG 202


>sp|CPGS_PYRHO|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus horikoshii (strain

Query: 1 RRLGDTMLGG 10
+R+G T +GG
Sbjct: 131 KRIGKTAIGG 140


>sp|DNAK_METTE|CHAPERONE protein DnaK|Methanosarcina thermophila

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 196 GDTHLGG 202


>sp|DNAK_METAC|CHAPERONE protein DnaK|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 196 GDTHLGG 202


>sp|DNAK_METBF|CHAPERONE protein DnaK|Methanosarcina barkeri (strain Fusaro /

Query: 4 GDTMLGG 10
GDT LGG
Sbjct: 196 GDTRLGG 202


>sp|CPGS_PYRAB|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus abyssi (strain GE5 /

Query: 1 RRLGDTMLGG 10
+R+G T +GG
Sbjct: 127 KRVGKTAIGG 136




103|SequenceR|520|511|ENGSLRRLGD

>sp|PYRC_ARCFU|DIHYDROOROTASE fulgidus (strain ATCC 49558

Query: 1 ENGSLRRLG 9
ENG ++R+G
Sbjct: 20 ENGRIKRIG 28


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 5 LRRLGD 10
LRRLGD
Sbjct: 37 LRRLGD 42


>sp|SODF_METTM|SUPEROXIDE dismutase [Fe]|Methanothermobacter marburgensis (strain ATCC

Query: 2 NGSLRRLGD 10
NG LR+L D
Sbjct: 43 NGVLRKLDD 51


>sp|IF2P_METJA|PROBABLE translation initiation factor IF-2|Methanocaldococcus jannaschii

Query: 1 ENGSLRRLG 9
ENG L +LG
Sbjct: 505 ENGRLTKLG 513


>sp|Y436_PYRFU|KELCH domain-containing protein PF0436|Pyrococcus furiosus (strain ATCC

Query: 1 ENGSLRRLGD 10
ENGS+R +
Sbjct: 136 ENGSMREFAE 145


>sp|Y1033_SACS2|KELCH domain-containing protein SSO1033|Saccharolobus solfataricus

Query: 2 NGSLRRLG 9
NG+L+R+G
Sbjct: 274 NGNLQRVG 281


>sp|TRUA_METBF|TRNA pseudouridine synthase A|Methanosarcina barkeri (strain Fusaro /

Query: 1 ENGSLRRLGD 10
+N S+RR GD
Sbjct: 237 DNYSIRRAGD 246


>sp|Y643_PYRHO|UNCHARACTERIZED protein PH0643|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 NGSLRRLG 9
NG +R+LG
Sbjct: 156 NGKIRQLG 163




104|SequenceR|525|516|KTFVYENGSL

>sp|Y939_SULTO|KELCH domain-containing protein STK_09390|Sulfurisphaera tokodaii

Query: 3 FVYENGS 9
+VYENGS
Sbjct: 67 YVYENGS 73


>sp|SLAA_SACS2|S-LAYER protein A|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 FVYENGS 9
F+Y+NGS
Sbjct: 375 FIYQNGS 381


>sp|COFH_METAR|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocella arvoryzae (strain DSM

Query: 2 TFVYENGSL 10
TF++EN SL
Sbjct: 240 TFMHENNSL 248


>sp|PYCA_METJA|PYRUVATE carboxylase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 3 FVYENGSL 10
F+YENG+
Sbjct: 276 FLYENGNF 283


>sp|PYCA_ARCFU|PYRUVATE carboxylase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FVYENGSL 10
F+YENG+
Sbjct: 275 FLYENGNF 282


>sp|DPOL_PYRSD|DNA polymerase|Pyrococcus sp. (strain GB-D)

Query: 3 FVYENGSL 10
FVY NG L
Sbjct: 591 FVYRNGDL 598


>sp|Y1535_METJA|UNCHARACTERIZED protein MJ1535|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TFVYENGSL 10
YENGSL
Sbjct: 78 ALAYENGSL 86


>sp|RF1_METM7|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C7 /

Query: 1 KTFVYENGSL 10
KTFVY SL
Sbjct: 117 KTFVYRCDSL 126


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FVYENGSL 10
++YENG L
Sbjct: 169 YIYENGLL 176


>sp|PDXS_METLZ|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Methanocorpusculum labreanum

Query: 3 FVYENGSL 10
FV++NG L
Sbjct: 197 FVHDNGKL 204


>sp|Y1394_METJA|UNCHARACTERIZED protein MJ1394|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YENGSL 10
YENGSL
Sbjct: 178 YENGSL 183


Query: 1 KTFVYENGSL 10
K ++Y NG+L
Sbjct: 163 KFYIYSNGTL 172


>sp|RF1_METM5|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C5 /

Query: 1 KTFVYENGSL 10
KTFVY SL
Sbjct: 117 KTFVYRCDSL 126


>sp|RF1_METM6|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain C6 /

Query: 1 KTFVYENGSL 10
KTFVY SL
Sbjct: 117 KTFVYRCDSL 126


>sp|RF1_METMP|PEPTIDE chain release factor subunit|Methanococcus maripaludis (strain DSM

Query: 1 KTFVYENGSL 10
KTFVY SL
Sbjct: 117 KTFVYRCDSL 126


>sp|ACD2_ARCFU|ACETATE--COA ligase [ADP-forming] II|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 FVYENGSL 10
FVYE G++
Sbjct: 190 FVYERGAV 197


>sp|SLAA_SULAC|S-LAYER protein A|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 VYENGSL 10
VY NGSL
Sbjct: 1214 VYTNGSL 1220


>sp|SYW_THEKO|TRYPTOPHAN--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KTFVYEN 7
KTF+++N
Sbjct: 148 KTFIFQN 154




105|SequenceR|530|521|SQHVNKTFVY

>sp|PAN_THEKO|PROTEASOME-ACTIVATING nucleotidase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SQHVNKTFV 9
+ HVN TF+
Sbjct: 193 ANHVNATFI 201


>sp|PAN_THEGJ|PROTEASOME-ACTIVATING nucleotidase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 SQHVNKTFV 9
+ HVN TF+
Sbjct: 193 ANHVNATFI 201


>sp|PUS10_HALLT|TRNA pseudouridine synthase Pus10|Halorubrum lacusprofundi (strain ATCC

Query: 4 VNKTFVY 10
VN TFVY
Sbjct: 163 VNSTFVY 169


>sp|TRUB_META3|PROBABLE tRNA pseudouridine synthase B|Methanococcus aeolicus (strain ATCC

Query: 2 QHVNKTFV 9
QH+NK V
Sbjct: 231 QHINKIIV 238


>sp|HIS6_METJA|IMIDAZOLE glycerol phosphate synthase subunit|Methanocaldococcus jannaschii

Query: 2 QHVNKTFVY 10
+HV + FVY
Sbjct: 228 EHVYEAFVY 236


>sp|Y329_METJA|UNCHARACTERIZED protein MJ0329|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SQHVNKTFVY 10
S H N+T VY
Sbjct: 214 SNHQNRTRVY 223




106|SequenceR|535|526|ALHSHSQHVN

>sp|SYG_METTH|GLYCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 LHSHSQH 8
L SHSQH
Sbjct: 335 LRSHSQH 341


>sp|RS7_ARCFU|SMALL ribosomal subunit protein uS7|Archaeoglobus fulgidus (strain ATCC

Query: 3 HSHSQHVN 10
H+H +H N
Sbjct: 41 HNHGRHAN 48


>sp|EF1A_NANEQ|ELONGATION factor 1-alpha|Nanoarchaeum equitans (strain Kin4-M)

Query: 2 LHSHSQHV 9
LH H+ HV
Sbjct: 344 LHVHTAHV 351


>sp|RNZ_AERPE|RIBONUCLEASE Z|Aeropyrum pernix (strain ATCC 700893

Query: 3 HSHSQHVN 10
H H H+N
Sbjct: 64 HPHGDHIN 71


>sp|Y1347_HALLT|UPF0173 metal-dependent hydrolase Hlac_1347|Halorubrum lacusprofundi

Query: 3 HSHSQHV 9
H HS H+
Sbjct: 47 HGHSDHI 53


>sp|Y1194_METTH|PROBABLE deacetylase MTH_1194|Methanothermobacter thermautotrophicus

Query: 2 LHSHSQHV 9
LH+H HV
Sbjct: 11 LHNHEGHV 18




107|SequenceR|540|531|ITIPMALHSH

>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 1 ITIPMALHSH 10
ITIP+ +H H
Sbjct: 202 ITIPIDVHCH 211


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 1 ITIPMALHSH 10
ITIP+ +H H
Sbjct: 202 ITIPIDVHCH 211


>sp|CIMA_ARCFU|PUTATIVE (R)-citramalate synthase CimA|Archaeoglobus fulgidus (strain ATCC

Query: 1 ITIPMALHSH 10
+ +P+A+H H
Sbjct: 186 VKLPLAIHCH 195


>sp|SIHH_METJA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITIPMALH 8
ITI MALH
Sbjct: 43 ITIGMALH 50


>sp|LEU1_METJA|2-ISOPROPYLMALATE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITIPMALHSH 10
I +P+++H H
Sbjct: 206 IKVPISVHCH 215


>sp|WTPB_PYRFU|MOLYBDATE/TUNGSTATE transport system permease protein|Pyrococcus furiosus (strain ATCC

Query: 1 ITIPMALHS 9
+T+P A+HS
Sbjct: 168 VTLPNAIHS 176


>sp|SIHH_METMP|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ITIPMALH 8
+TI MALH
Sbjct: 43 LTIGMALH 50


>sp|LEU1_PYRAE|PROBABLE 2-isopropylmalate synthase|Pyrobaculum aerophilum (strain ATCC

Query: 3 IPMALHSH 10
IPM +H H
Sbjct: 193 IPMHVHCH 200


>sp|LEU1_METKA|PROBABLE 2-isopropylmalate synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 ITIPMALHSH 10
+ +P+++H H
Sbjct: 187 VDVPVSVHCH 196




108|SequenceR|545|536|PPVDNITIPM

>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 PPVDNITIP 9
P VD+ITIP
Sbjct: 497 PYVDDITIP 505


>sp|GATE_METKA|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanopyrus kandleri (strain AV19 /

Query: 2 PVDNITI 8
PVDN+TI
Sbjct: 525 PVDNLTI 531


>sp|CAS3_HALVD|CRISPR-ASSOCIATED nuclease/helicase Cas3|Haloferax volcanii (strain ATCC 29605

Query: 1 PPVDNITIP 9
PP+ +T+P
Sbjct: 299 PPIATLTLP 307


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PPVDNITIPM 10
PP+ + +PM
Sbjct: 121 PPIFEVILPM 130


>sp|COAD_THEKO|PHOSPHOPANTETHEINE adenylyltransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 PVDNITIPM 10
P+D +TIP+
Sbjct: 121 PLDIVTIPI 129


>sp|DAPA_METTH|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 DNITIPM 10
DN+T+PM
Sbjct: 193 DNLTLPM 199


>sp|SYI_HALSA|ISOLEUCINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 1 PPVDNITI 8
P VD+ITI
Sbjct: 510 PTVDDITI 517


>sp|Y958_METJA|UNCHARACTERIZED protein MJ0958|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DNITIP 9
DNIT+P
Sbjct: 240 DNITLP 245


>sp|Y762_METJA|UNCHARACTERIZED transporter MJ0762|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPVDNITIPM 10
PPV I IP+
Sbjct: 146 PPVGLIVIPI 155


>sp|Y576_METJA|UNCHARACTERIZED transporter MJ0576|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PPVDNITIPM 10
PPV I IP+
Sbjct: 153 PPVGLIVIPI 162




109|SequenceR|550|541|LQSICPPVDN

>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 LQSICP 6
+QSICP
Sbjct: 633 MQSICP 638


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 SICPPVD 9
S+CPP +
Sbjct: 453 SVCPPYN 459




110|SequenceR|555|546|EENDLLQSIC

>sp|MCH_METJA|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EENDLLQSIC 10
+END ++S+C
Sbjct: 245 DENDDIESLC 254


>sp|DNLI_THEVO|DNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 EENDLLQSIC 10
E+ND +++C
Sbjct: 465 EKNDTFETVC 474


>sp|NAH1_METJA|NA(+)/H(+) antiporter 1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NDLLQSIC 10
+DLL SIC
Sbjct: 234 DDLLPSIC 241


>sp|RAD50_METTH|DNA double-strand break repair Rad50|Methanothermobacter

Query: 3 NDLLQSIC 10
+DL QSIC
Sbjct: 620 HDLTQSIC 627


>sp|DHQS_METHJ|3-DEHYDROQUINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 EENDLLQSIC 10
++ DL++SIC
Sbjct: 130 DDPDLVRSIC 139


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 EENDLLQSIC 10
+END ++++C
Sbjct: 245 DENDDVEALC 254


>sp|SPEE_METJA|POLYAMINE aminopropyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 4 DLLQSIC 10
DL+Q+IC
Sbjct: 205 DLIQNIC 211


>sp|CCA_METMP|CCA-ADDING enzyme|Methanococcus maripaludis (strain DSM 14266

Query: 3 NDLLQSIC 10
ND+L+ IC
Sbjct: 14 NDVLKDIC 21




111|SequenceR|560|551|NFDWSEENDL

>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NFDWSEENDL 10
NFDW+ + DL
Sbjct: 373 NFDWNRQFDL 382


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NFDWSEENDL 10
NFDW+ + DL
Sbjct: 373 NFDWNRQFDL 382


>sp|KAD6_THEON|PUTATIVE adenylate kinase|Thermococcus onnurineus (strain NA1)

Query: 3 DWSEEND 9
DWSEE D
Sbjct: 163 DWSEEYD 169


>sp|THIC1_METST|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 NFDWSEENDL 10
NFDW ++ +L
Sbjct: 377 NFDWEKQFEL 386


>sp|AROA_METHJ|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 2 FDWSEEN 8
DWS EN
Sbjct: 63 LDWSREN 69


>sp|PTH_METBF|PEPTIDYL-TRNA hydrolase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DWSEENDL 10
+W+ +NDL
Sbjct: 34 EWASKNDL 41


>sp|GGR_METJA|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DWSEE 7
DWSEE
Sbjct: 314 DWSEE 318


>sp|HELS_ARCFU|ATP-DEPENDENT DNA helicase Hel308|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 DWSEEND 9
DW EE D
Sbjct: 569 DWIEEKD 575


>sp|ACEA_HALVD|ISOCITRATE lyase|Haloferax volcanii (strain ATCC 29605

Query: 1 NFDWSEEND 9
+F WSEE D
Sbjct: 234 SFAWSEEED 242


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 2 FDWSEEN 8
+ WSE+N
Sbjct: 294 YSWSEDN 300


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 DWSEENDL 10
DW E+DL
Sbjct: 305 DWDWESDL 312


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 4 WSEENDL 10
W EE DL
Sbjct: 88 WREEGDL 94


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 FDWSEENDL 10
DW E +DL
Sbjct: 791 LDWPEADDL 799


>sp|AROC_HALLT|CHORISMATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 FDWSEENDL 10
D SEEND+
Sbjct: 175 LDHSEENDV 183


>sp|SYM_HYPBU|METHIONINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 1 NFDWSE 6
NF WSE
Sbjct: 370 NFTWSE 375


>sp|CSG_HALGI|CELL surface glycoprotein|Haloferax gibbonsii

Query: 2 FDWSEEN 8
FD+SE+N
Sbjct: 746 FDFSEQN 752




112|SequenceR|565|556|ELEFINFDWS

>sp|PURT_METJA|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanocaldococcus

Query: 3 EFINFDW 9
EFINFD+
Sbjct: 195 EFINFDY 201


>sp|PURT_META3|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus aeolicus

Query: 3 EFINFDW 9
EFINFD+
Sbjct: 197 EFINFDY 203


>sp|PURT_METVS|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Methanococcus vannielii

Query: 3 EFINFDW 9
EF+NFD+
Sbjct: 194 EFVNFDY 200


>sp|DPOL_METJA|DNA polymerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LEFINFDWS 10
LEF+ DWS
Sbjct: 1475 LEFVRRDWS 1483


>sp|MRE11_METKA|DNA double-strand break repair protein|Methanopyrus kandleri (strain

Query: 1 ELEFINFDWS 10
E EF+ +WS
Sbjct: 251 EYEFVEVEWS 260


>sp|SYFA_AERPE|PHENYLALANINE--TRNA ligase alpha subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 ELEFINFD 8
ELE NFD
Sbjct: 261 ELELFNFD 268


>sp|SYFA_PYRCJ|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ELEFINFD 8
E+EF NFD
Sbjct: 245 EVEFWNFD 252


>sp|SYFA_PYRAR|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 ELEFINFD 8
E+EF NFD
Sbjct: 245 EVEFWNFD 252


>sp|SYFA_PYRAE|PHENYLALANINE--TRNA ligase alpha subunit|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ELEFINFD 8
E+EF NFD
Sbjct: 246 EVEFWNFD 253


>sp|THII_METJA|PROBABLE tRNA sulfurtransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ELEFINFDW 9
ELEF+ +D+
Sbjct: 243 ELEFVVYDY 251


>sp|SYR_THEAC|ARGININE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 LEFINFDW 9
+EF FDW
Sbjct: 239 IEFDEFDW 246


>sp|FLA1_PYRHO|PROBABLE flagellin PH0546|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 INFDWS 10
+NF+WS
Sbjct: 151 VNFNWS 156


>sp|SYFA_METS5|PHENYLALANINE--TRNA ligase alpha subunit|Metallosphaera sedula (strain ATCC 51363

Query: 1 ELEFINFD 8
E EF NFD
Sbjct: 243 ETEFFNFD 250


>sp|SYFA_SACS2|PHENYLALANINE--TRNA ligase alpha subunit|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ELEFINFD 8
E+EF NFD
Sbjct: 243 EMEFYNFD 250


>sp|NIFH1_METBA|NITROGENASE iron protein 1|Methanosarcina barkeri

Query: 1 ELEFINFD 8
+L+FI+FD
Sbjct: 118 DLDFIHFD 125


>sp|SYFA_SULTO|PHENYLALANINE--TRNA ligase alpha subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ELEFINFD 8
E+EF NFD
Sbjct: 241 EIEFYNFD 248


>sp|THIC_HALSA|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 700922

Query: 6 NFDWS 10
NFDW+
Sbjct: 373 NFDWN 377


>sp|THIC_HALS3|PHOSPHOMETHYLPYRIMIDINE synthase|Halobacterium salinarum (strain ATCC 29341

Query: 6 NFDWS 10
NFDW+
Sbjct: 373 NFDWN 377


>sp|CCA_METM5|CCA-ADDING enzyme|Methanococcus maripaludis (strain C5 /

Query: 1 ELEFINFDWS 10
E EF+NFD S
Sbjct: 231 EHEFLNFDDS 240


>sp|TRUD_SULTO|PROBABLE tRNA pseudouridine synthase D|Sulfurisphaera tokodaii (strain DSM

Query: 4 FINFDWS 10
FIN DWS
Sbjct: 8 FINEDWS 14


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 1 ELEFINFD 8
EL+ +NFD
Sbjct: 647 ELQLLNFD 654


>sp|DTDA_METMP|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 ELEFINFDW 9
E +FI DW
Sbjct: 221 EFDFIGIDW 229




113|SequenceR|570|561|KHTIAELEFI

>sp|HMGCS_METTP|HYDROXYMETHYLGLUTARYL-COA synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 HTIAELEF 9
HT+A++EF
Sbjct: 103 HTVADMEF 110


>sp|RAD50_METAC|DNA double-strand break repair Rad50|Methanosarcina acetivorans (strain

Query: 1 KHTIAELE 8
KH I+ELE
Sbjct: 797 KHKISELE 804




114|SequenceR|575|566|YVLPRKHTIA

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YVLPRKHTIA 10
Y LP++H IA
Sbjct: 221 YQLPKEHLIA 230


>sp|SPSS2_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocella arvoryzae (strain DSM 22066

Query: 4 PRKHTI 9
PRKHT+
Sbjct: 384 PRKHTL 389


>sp|SPSS1_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PRKHTI 9
PRKHT+
Sbjct: 313 PRKHTL 318


>sp|SPSS1_METHJ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanospirillum hungatei JF-1 (strain ATCC

Query: 4 PRKHTI 9
PRKHT+
Sbjct: 313 PRKHTL 318


>sp|SPSS1_METB6|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanoregula boonei (strain DSM 21154

Query: 4 PRKHTI 9
PRKHT+
Sbjct: 313 PRKHTL 318


>sp|CDC62_SULTO|ORC1-TYPE DNA replication protein 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 LPRKHT 8
+PRKHT
Sbjct: 354 IPRKHT 359


>sp|TRF3_THEVO|TRICORN protease-interacting factor F3|Thermoplasma volcanium (strain ATCC

Query: 1 YVLPRKHTIA 10
Y LP+ H I+
Sbjct: 215 YALPKMHLIS 224


>sp|TRF3_THEAC|TRICORN protease-interacting factor F3|Thermoplasma acidophilum (strain

Query: 1 YVLPRKHTIA 10
Y LP+ H I+
Sbjct: 214 YALPKMHLIS 223


>sp|TRF2_THEVO|TRICORN protease-interacting factor F2|Thermoplasma volcanium (strain ATCC

Query: 1 YVLPRKHTIA 10
Y LP+ H I+
Sbjct: 220 YALPKMHLIS 229


>sp|TRF2_THEAC|TRICORN protease-interacting factor F2|Thermoplasma acidophilum (strain

Query: 1 YVLPRKHTIA 10
Y LP+ H I+
Sbjct: 220 YALPKMHLIS 229


>sp|SPSS2_METLZ|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 2|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 PRKHTI 9
PRKHT+
Sbjct: 313 PRKHTL 318


>sp|APE2_SACS2|LEUCYL aminopeptidase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 YVLPRKHTIA 10
Y LP+ H IA
Sbjct: 222 YQLPKVHLIA 231


>sp|SYDND_METM5|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain C5 /

Query: 1 YVLPRKH 7
Y LP KH
Sbjct: 339 YTLPHKH 345


>sp|SYDND_METMP|ASPARTATE--TRNA(ASP/ASN) ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 YVLPRKH 7
Y LP KH
Sbjct: 339 YTLPHKH 345


>sp|DNLI_AERPE|DNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 YVLPRKH 7
+++PRKH
Sbjct: 508 HIIPRKH 514


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 YVLPRKHTIA 10
Y LP +TIA
Sbjct: 303 YALPAYYTIA 312


>sp|DTDA_DESA1|D-AMINOACYL-TRNA deacylase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 4 PRKHT 8
PRKHT
Sbjct: 198 PRKHT 202




115|SequenceR|580|571|VKLGLYVLPR

>sp|AGLB1_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 3 LGLYVLP 9
LGLY+LP
Sbjct: 90 LGLYILP 96


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 1 VKLGLYVLP 9
++LGLY+ P
Sbjct: 416 IRLGLYIPP 424


>sp|Y169_METJA|UNCHARACTERIZED ATP-binding protein MJ0169|Methanocaldococcus jannaschii (strain

Query: 2 KLGLYVLP 9
K G+YVLP
Sbjct: 78 KTGVYVLP 85


>sp|SURE_HALSA|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 700922

Query: 3 LGLYVLPR 10
LG+YVL R
Sbjct: 97 LGMYVLGR 104


>sp|SURE_HALS3|5'-NUCLEOTIDASE SurE|Halobacterium salinarum (strain ATCC 29341

Query: 3 LGLYVLPR 10
LG+YVL R
Sbjct: 97 LGMYVLGR 104


>sp|GLMA_PYRHO|EXO-BETA-D-GLUCOSAMINIDASE horikoshii (strain ATCC 700860

Query: 2 KLGLYVLPR 10
KLGLYV+ R
Sbjct: 89 KLGLYVIIR 97


>sp|LYEL_HALVD|LYCOPENE elongase/hydratase|Haloferax volcanii (strain ATCC 29605

Query: 1 VKLGLYVLP 9
V GLYVLP
Sbjct: 164 VSNGLYVLP 172


>sp|UBIX_SACS2|FLAVIN prenyltransferase UbiX|Saccharolobus solfataricus (strain ATCC

Query: 2 KLGLYVLP 9
+LG+Y++P
Sbjct: 155 RLGVYIMP 162


>sp|YPV2_METTF|UNCHARACTERIZED protein ORF2|Methanothermobacter thermautotrophicus

Query: 2 KLGLYV 7
KLGLYV
Sbjct: 200 KLGLYV 205


>sp|AGLB1_PYRHO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 LGLYVLP 9
LGLY+LP
Sbjct: 92 LGLYLLP 98


>sp|LYEL_HALSA|LYCOPENE elongase/hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 4 GLYVLP 9
GLYVLP
Sbjct: 141 GLYVLP 146




116|SequenceR|585|576|GFRSFVKLGL

>sp|TRM1_PYRHO|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus horikoshii

Query: 2 FRSFVKL 8
FR+FVKL
Sbjct: 230 FRAFVKL 236


>sp|TRM1_PYRFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus furiosus (strain

Query: 2 FRSFVKL 8
FR+FVKL
Sbjct: 229 FRAFVKL 235


>sp|TRM1_PYRAB|TRNA (guanine(26)-N(2))-dimethyltransferase|Pyrococcus abyssi (strain

Query: 2 FRSFVKL 8
FR+F+KL
Sbjct: 227 FRAFIKL 233


>sp|RPO7_METJA|DNA-DIRECTED RNA polymerase subunit Rpo7|Methanocaldococcus jannaschii (strain

Query: 2 FRSFVKLG 9
F SFV+LG
Sbjct: 95 FGSFVRLG 102


>sp|THRC_METAC|THREONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 GFRSFVKLGL 10
GFR F LG+
Sbjct: 242 GFREFKILGI 251


>sp|Y844_ARCFU|UNCHARACTERIZED protein AF_0844|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 GFRSFVK 7
GF+S+VK
Sbjct: 133 GFKSYVK 139


>sp|ACYP_CALMQ|ACYLPHOSPHATASE maquilingensis (strain ATCC 700844

Query: 1 GFRSFVK 7
GFRSF++
Sbjct: 19 GFRSFIR 25


>sp|Y718_METJA|UNCHARACTERIZED transporter MJ0718|Methanocaldococcus jannaschii (strain ATCC

Query: 2 FRSFVKLGL 10
F SF+KLG+
Sbjct: 27 FMSFLKLGM 35


>sp|ACYP_SACS2|ACYLPHOSPHATASE solfataricus (strain ATCC 35092

Query: 1 GFRSFVKL 8
GFR FV++
Sbjct: 28 GFRKFVQI 35




117|SequenceR|590|581|LFECVGFRSF

>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 3 ECVGFR 8
EC+G+R
Sbjct: 1640 ECIGYR 1645


>sp|ACYP_CALMQ|ACYLPHOSPHATASE maquilingensis (strain ATCC 700844

Query: 1 LFECVGFRSF 10
+ + VGFRSF
Sbjct: 14 IVQGVGFRSF 23


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 LFECVGF 7
LF+C+ F
Sbjct: 557 LFDCINF 563




118|SequenceR|595|586|TESCNLFECV

>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SCNLFECV 10
SC+ F CV
Sbjct: 323 SCHYFHCV 330


>sp|IF2G_METVS|TRANSLATION initiation factor 2 subunit|Methanococcus vannielii (strain ATCC

Query: 2 ESCNLFEC 9
ESCN EC
Sbjct: 59 ESCNEPEC 66


>sp|RS172_METAC|SMALL ribosomal subunit protein uS17B|Methanosarcina acetivorans

Query: 1 TESCNLFEC 9
TE CN EC
Sbjct: 13 TEDCNDPEC 21


>sp|PSB_METMJ|PROTEASOME subunit beta|Methanoculleus marisnigri (strain ATCC 35101

Query: 4 CNLFE 8
CNLFE
Sbjct: 74 CNLFE 78




119|SequenceR|600|591|WARLTTESCN

>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WARLTTESC 9
W R+T ++C
Sbjct: 187 WERITEKTC 195


>sp|SYA_HALMA|ALANINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 WARLTTESC 9
W+R+ E+C
Sbjct: 31 WSRVKRETC 39


>sp|CISY_THEAC|CITRATE synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WARLTT 6
W RLTT
Sbjct: 18 WTRLTT 23


>sp|GGGPS_HALSA|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 WARLTTES 8
W R TTE+
Sbjct: 112 WERTTTEA 119


>sp|GGGPS_HALS3|GERANYLGERANYLGLYCERYL phosphate synthase|Halobacterium salinarum (strain ATCC 29341

Query: 1 WARLTTES 8
W R TTE+
Sbjct: 112 WERTTTEA 119


>sp|PGMUT_SULTO|PHOSPHOGLUCOSAMINE/PHOSPHOGALACTOSAMINE mutase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 WARLTTE 7
W+ LTTE
Sbjct: 138 WSSLTTE 144




120|SequenceR|605|596|EIVQFWARLT

>sp|SYV_AERPE|VALINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 EIVQFWARL 9
EIVQ W RL
Sbjct: 135 EIVQLWRRL 143


>sp|TMCA_THES3|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus sp. (strain AM4)

Query: 1 EIVQFWAR 8
E+V+FW R
Sbjct: 629 ELVRFWVR 636


>sp|TMCA_THEKO|TRNA(MET) cytidine acetyltransferase TmcA|Thermococcus kodakarensis (strain

Query: 1 EIVQFWAR 8
E+V+FW R
Sbjct: 630 ELVRFWVR 637


>sp|TMCA_HALMA|TRNA(MET) cytidine acetyltransferase TmcA|Haloarcula marismortui (strain ATCC

Query: 1 EIVQFWA 7
E+V+FWA
Sbjct: 588 ELVRFWA 594


>sp|CAS1B_SACS2|CRISPR-ASSOCIATED endonuclease Cas1 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 VQFWARLT 10
+++WAR+T
Sbjct: 121 LKYWARVT 128


>sp|THSB_AERPE|THERMOSOME subunit beta|Aeropyrum pernix (strain ATCC 700893

Query: 1 EIVQFWAR 8
EIV W+R
Sbjct: 493 EIVDMWSR 500


>sp|ATGT_PYRAE|TRNA-GUANINE(15) transglycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 EIVQFWARL 9
EI+QF AR+
Sbjct: 101 EILQFQARI 109


>sp|IF6_THEGJ|TRANSLATION initiation factor 6|Thermococcus gammatolerans (strain DSM 15229

Query: 1 EIVQFWARLT 10
E+V F +RLT
Sbjct: 95 EVVPFQSRLT 104


>sp|SYL_METMP|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 EIVQFWARL 9
E+V+ W +L
Sbjct: 775 EVVEIWTKL 783


>sp|SYL_METM7|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 EIVQFWARL 9
E+V+ W +L
Sbjct: 775 EVVEIWTKL 783


>sp|SYL_METM5|LEUCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 EIVQFWARL 9
E+V+ W +L
Sbjct: 775 EVVEIWTKL 783


>sp|SYL_METVS|LEUCINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 EIVQFWARL 9
E+V+ W +L
Sbjct: 772 EVVEIWTKL 780




121|SequenceR|610|601|SHYNAEIVQF

>sp|HYPA_THEON|HYDROGENASE maturation factor HypA|Thermococcus onnurineus (strain NA1)

Query: 4 NAEIVQF 10
NAEIV+F
Sbjct: 40 NAEIVEF 46


>sp|SRP19_META3|SIGNAL recognition particle 19 kDa|Methanococcus aeolicus (strain ATCC

Query: 3 YNAEIVQ 9
YNAEIV+
Sbjct: 46 YNAEIVK 52


>sp|SUCC_DESA1|SUCCINATE--COA ligase [ADP-forming] subunit beta|Desulfurococcus amylolyticus

Query: 3 YNAEIVQF 10
Y+AE+V+F
Sbjct: 184 YDAELVEF 191


>sp|SUCC2_ARCFU|SUCCINATE--COA ligase [ADP-forming] subunit beta|Archaeoglobus fulgidus (strain

Query: 2 HYNAEIVQ 9
HY AE+V+
Sbjct: 182 HYEAELVE 189


>sp|ATGT_ARCFU|TRNA-GUANINE(15) transglycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 NAEIVQF 10
NAEIV+F
Sbjct: 103 NAEIVEF 109


>sp|RIFK_ARCFU|RIBOFLAVIN kinase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SHYNAEIVQ 9
+HY AEI++
Sbjct: 200 THYPAEILE 208


>sp|IF2P_METBU|PROBABLE translation initiation factor IF-2|Methanococcoides burtonii

Query: 2 HYNAE 6
HYNAE
Sbjct: 227 HYNAE 231


>sp|GCSPA_SULTO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Sulfurisphaera

Query: 2 HYNAEIVQF 10
HY E+V+F
Sbjct: 82 HYVPEVVKF 90


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain

Query: 2 HYNAEIVQ 9
H NAE+++
Sbjct: 81 HLNAEVIE 88


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 2 HYNAEIVQ 9
H NAE+++
Sbjct: 80 HLNAEVIE 87


>sp|HYPA_PYRAB|HYDROGENASE maturation factor HypA|Pyrococcus abyssi (strain GE5 /

Query: 4 NAEIVQF 10
NAE+V+F
Sbjct: 40 NAEVVEF 46


>sp|HEM1_SULAC|GLUTAMYL-TRNA reductase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YNAEIVQF 10
YNAE++ F
Sbjct: 226 YNAELLDF 233




122|SequenceR|615|606|HYANSSHYNA

>sp|HELS_HALSA|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 700922

Query: 1 HYANSSHYN 9
HY S HY+
Sbjct: 220 HYGQSLHYD 228


>sp|HELS_HALS3|ATP-DEPENDENT DNA helicase Hel308|Halobacterium salinarum (strain ATCC 29341

Query: 1 HYANSSHYN 9
HY S HY+
Sbjct: 220 HYGQSLHYD 228


>sp|SIHH_METTH|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 ANSSHYN 9
ANS H+N
Sbjct: 290 ANSGHFN 296


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ANSSHYN 9
ANS H+N
Sbjct: 287 ANSGHFN 293


>sp|SIHH_METAC|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ANSSHYN 9
ANS H+N
Sbjct: 287 ANSGHFN 293


>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 3 ANSSHYN 9
ANS H+N
Sbjct: 288 ANSGHFN 294


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 3 ANSSHYN 9
ANS H+N
Sbjct: 288 ANSGHFN 294


>sp|GCSPA_METS5|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Metallosphaera

Query: 4 NSSHYN 9
NSSHY+
Sbjct: 133 NSSHYD 138


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HYANSSH 7
+Y NSSH
Sbjct: 1623 YYTNSSH 1629




123|SequenceR|620|611|AHTSNHYANS

>sp|TRM1_HALLT|TRNA (guanine(26)-N(2))-dimethyltransferase|Halorubrum lacusprofundi

Query: 1 AHTSNHYANS 10
+H S HYA +
Sbjct: 204 SHVSRHYART 213


>sp|WECB_METJA|UDP-N-ACETYLGLUCOSAMINE 2-epimerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HTSNHYANS 10
HT+ HY+ +
Sbjct: 34 HTNQHYSEN 42


>sp|SYA_NITMS|ALANINE--TRNA ligase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 HTSNHYANS 10
HTS H N+
Sbjct: 587 HTSTHIINA 595


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 HTSNHYANS 10
HTS H N+
Sbjct: 587 HTSTHILNA 595




124|SequenceR|625|616|HLVDAAHTSN

>sp|ACDA_METJA|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanocaldococcus

Query: 1 HLVDAAHT 8
HL+ AAHT
Sbjct: 178 HLLSAAHT 185


>sp|CETZ1_HALVD|TUBULIN-LIKE protein CetZ1|Haloferax volcanii (strain ATCC 29605

Query: 3 VDAAHTSN 10
+D AHT+N
Sbjct: 262 LDTAHTTN 269


>sp|BGAL_HALLT|BETA-GALACTOSIDASE Bga|Halorubrum lacusprofundi (strain ATCC 49239

Query: 4 DAAHTS 9
DAAHTS
Sbjct: 379 DAAHTS 384


>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 HLVDAAHT 8
HL+ A HT
Sbjct: 177 HLLSACHT 184


>sp|GATE_METS3|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanobrevibacter smithii (strain ATCC

Query: 1 HLVDAAHT 8
H+VD HT
Sbjct: 109 HIVDEFHT 116




125|SequenceR|630|621|FFATAHLVDA

>sp|ILVD_METTP|DIHYDROXY-ACID dehydratase|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 ATAHLVDA 10
ATAH VDA
Sbjct: 209 ATAHAVDA 216


>sp|ILVD_METMA|DIHYDROXY-ACID dehydratase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 ATAHLVDA 10
ATAH VDA
Sbjct: 215 ATAHAVDA 222


>sp|ILVD_METBU|DIHYDROXY-ACID dehydratase|Methanococcoides burtonii (strain DSM 6242

Query: 3 ATAHLVDA 10
ATAH VDA
Sbjct: 215 ATAHAVDA 222


>sp|ILVD_METBF|DIHYDROXY-ACID dehydratase|Methanosarcina barkeri (strain Fusaro /

Query: 3 ATAHLVDA 10
ATAH VDA
Sbjct: 215 ATAHAVDA 222


>sp|ILVD2_METAC|DIHYDROXY-ACID dehydratase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ATAHLVDA 10
ATAH VDA
Sbjct: 215 ATAHAVDA 222


>sp|ILVD1_METAC|DIHYDROXY-ACID dehydratase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 ATAHLVDA 10
ATAH VDA
Sbjct: 215 ATAHAVDA 222


>sp|TRMBR_THELN|HTH-TYPE sugar sensing transcriptional regulator|Thermococcus litoralis

Query: 1 FFATAHLVD 9
FFA H VD
Sbjct: 253 FFAMFHAVD 261


>sp|TRMBR_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 1 FFATAHLVD 9
FFA H VD
Sbjct: 253 FFAMFHAVD 261


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC

Query: 3 ATAHLVD 9
AT HLVD
Sbjct: 365 ATMHLVD 371


>sp|ILVD_METVS|DIHYDROXY-ACID dehydratase|Methanococcus vannielii (strain ATCC 35089

Query: 3 ATAHLVDA 10
AT H VDA
Sbjct: 215 ATTHAVDA 222


>sp|ILVD_METMP|DIHYDROXY-ACID dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 3 ATAHLVDA 10
AT H VDA
Sbjct: 215 ATTHAVDA 222




126|SequenceR|635|626|REKGLFFATA

>sp|CSG_METAC|MAJOR S-layer protein|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KGLFFATA 10
+GL+FATA
Sbjct: 292 EGLYFATA 299


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 REKGLFF 7
REKG+FF
Sbjct: 310 REKGVFF 316


>sp|AGLB_METJA|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 REKGLFF 7
REKG FF
Sbjct: 782 REKGAFF 788


>sp|CSG_METMA|MAJOR S-layer protein|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KGLFFATA 10
+GLFF TA
Sbjct: 290 EGLFFKTA 297


>sp|MOAC_METAC|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina

Query: 2 EKGLFFATA 10
EKG FATA
Sbjct: 53 EKGNVFATA 61


>sp|LON_METBF|LON protease|Methanosarcina barkeri (strain Fusaro /

Query: 1 REKGLFFAT 9
++ GLF+AT
Sbjct: 112 QKNGLFYAT 120


>sp|DP2S_PYRAB|DNA polymerase II small subunit|Pyrococcus abyssi (strain GE5 /

Query: 2 EKGLFFA 8
+KG+FFA
Sbjct: 325 KKGIFFA 331


>sp|MCH_HALMA|MESACONYL-COA hydratase|Haloarcula marismortui (strain ATCC 43049

Query: 1 REKGLFF 7
REKG FF
Sbjct: 28 REKGHFF 34


>sp|MCH_HALHT|MESACONYL-COA hydratase|Haloarcula hispanica (strain ATCC 33960

Query: 1 REKGLFF 7
REKG FF
Sbjct: 28 REKGHFF 34


>sp|MOAC_METMA|PROBABLE cyclic pyranopterin monophosphate synthase|Methanosarcina mazei

Query: 2 EKGLFFATA 10
EKG FATA
Sbjct: 50 EKGNVFATA 58




127|SequenceR|640|631|LSGKVREKGL

>sp|APE2_SULTO|PROBABLE aminopeptidase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LSGKVREKGL 10
GKV+E+GL
Sbjct: 77 FEGKVKERGL 86


>sp|QUED_ARCFU|PUTATIVE 6-carboxy-5,6,7,8-tetrahydropterin synthase|Archaeoglobus

Query: 1 LSGKVREKGL 10
+SGKV+E G+
Sbjct: 39 ISGKVKENGM 48


>sp|PRIS_METAR|DNA primase small subunit PriS|Methanocella arvoryzae (strain DSM 22066

Query: 4 KVREKGL 10
K+REKGL
Sbjct: 269 KIREKGL 275


>sp|SYL_STAMF|LEUCINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 4 KVREKGL 10
K+REKGL
Sbjct: 176 KLREKGL 182


>sp|FAEHP_ARCFU|BIFUNCTIONAL enzyme Fae/Hps|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSGKVREK 8
L+GK++EK
Sbjct: 324 LAGKIKEK 331


>sp|ASD_METAC|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina

Query: 1 LSGKVRE 7
+SGK+RE
Sbjct: 97 ISGKIRE 103


>sp|ARGC_METLZ|N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 SGKVREKGL 10
+GK++E+G+
Sbjct: 82 AGKLKERGI 90


>sp|ASD_METBF|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanosarcina barkeri

Query: 1 LSGKVRE 7
+SGK+RE
Sbjct: 96 ISGKIRE 102


>sp|PDXT_AERPE|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Aeropyrum pernix (strain ATCC

Query: 1 LSGKVREK 8
L+GKVR+K
Sbjct: 90 LAGKVRDK 97


>sp|KAD6_METTH|PUTATIVE adenylate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 LSGKVREKGL 10
L+G +RE+GL
Sbjct: 15 LAGILRERGL 24


>sp|T1S2_METJA|TYPE I restriction enzyme MjaVIII|Methanocaldococcus jannaschii (strain

Query: 1 LSGKVREKGL 10
L+GK+R K L
Sbjct: 414 LTGKIRVKNL 423


>sp|RL21_SULAC|LARGE ribosomal subunit protein eL21|Sulfolobus acidocaldarius (strain

Query: 1 LSGKVREKG 9
L KVREKG
Sbjct: 16 LEKKVREKG 24


>sp|RL21_ARCFU|LARGE ribosomal subunit protein eL21|Archaeoglobus fulgidus (strain

Query: 1 LSGKVREKGL 10
L KVREKG+
Sbjct: 16 LRKKVREKGV 25


>sp|RPIA_ARCFU|RIBOSE-5-PHOSPHATE isomerase A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LSGKVREKGL 10
L K+RE+GL
Sbjct: 38 LGDKIREEGL 47


>sp|SYG_METM5|GLYCINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 LSGKVREKGL 10
L K+RE GL
Sbjct: 501 LKNKLRENGL 510




128|SequenceR|645|636|EDLQDLSGKV

>sp|ILVC_METLZ|KETOL-ACID reductoisomerase (NADP(+))|Methanocorpusculum labreanum (strain

Query: 2 DLQDLSGK 9
DL+DLSGK
Sbjct: 11 DLKDLSGK 18


>sp|LYSX_SULTO|ALPHA-AMINOADIPATE--LYSW ligase LysX|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 EDLQDLSGKV 10
E+LQDL+ KV
Sbjct: 219 EELQDLALKV 228


>sp|DPHB_METAR|DIPHTHINE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 EDLQDLSGK 9
ED+Q+L GK
Sbjct: 44 EDMQELYGK 52


>sp|COOS_METKA|CARBON monoxide dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 EDLQDLSG 8
EDL DL+G
Sbjct: 602 EDLPDLTG 609


>sp|DP2S_PYRFU|DNA polymerase II small subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 2 DLQDLSGKV 10
+++DL+GKV
Sbjct: 280 EIEDLTGKV 288


>sp|Y363_METJA|MCM-LIKE protein MJ0363|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 QDLSGKV 10
+DLSGKV
Sbjct: 249 EDLSGKV 255


>sp|RNP1_METTH|RIBONUCLEASE P protein component 1|Methanothermobacter thermautotrophicus

Query: 2 DLQDLSGKV 10
D+Q +SG+V
Sbjct: 26 DIQGISGRV 34


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 EDLQDLSGKV 10
++++DL GKV
Sbjct: 476 KEIEDLGGKV 485


>sp|DHYS_METKA|PROBABLE deoxyhypusine synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 EDLQDLSGKV 10
E L DLSG+V
Sbjct: 131 EVLSDLSGRV 140




129|SequenceR|650|641|ILAAVEDLQD

>sp|ENDA_METKA|TRNA-SPLICING endonuclease|Methanopyrus kandleri (strain AV19 /

Query: 1 ILAAVEDLQD 10
+LA VED+++
Sbjct: 157 VLAVVEDVEE 166


>sp|SYL_ARCFU|LEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LAAVEDLQ 9
LAA+EDL+
Sbjct: 319 LAAIEDLK 326


>sp|CCA_HALSA|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 700922

Query: 1 ILAAVEDLQ 9
+LAA+ED Q
Sbjct: 196 MLAAIEDWQ 204


>sp|CCA_HALS3|CCA-ADDING enzyme|Halobacterium salinarum (strain ATCC 29341

Query: 1 ILAAVEDLQ 9
+LAA+ED Q
Sbjct: 196 MLAAIEDWQ 204


>sp|RADA_METS5|DNA repair and recombination protein|Metallosphaera sedula (strain ATCC

Query: 2 LAAVEDLQD 10
+A VE+LQD
Sbjct: 188 IAIVEELQD 196




130|SequenceR|655|646|HVTAAILAAV

***** No hits found ******


131|SequenceR|660|651|PHDVDHVTAA

>sp|RPO2N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 PHDVDHVT 8
PHD DH T
Sbjct: 356 PHDKDHYT 363


>sp|RPO2N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanothermobacter thermautotrophicus

Query: 1 PHDVDHVT 8
PHD DH T
Sbjct: 351 PHDKDHYT 358


>sp|MTHZ_METTF|TYPE II methyltransferase M.MthZI|Methanothermobacter

Query: 2 HDVDHVTA 9
H+VD VTA
Sbjct: 75 HEVDRVTA 82


>sp|LEUC_METJA|ISOPROPYLMALATE/CITRAMALATE isomerase large subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PHDVDHVTAA 10
PH+VD+V A
Sbjct: 279 PHNVDNVKQA 288


>sp|LEUC2_ARCFU|3-ISOPROPYLMALATE dehydratase large subunit 2|Archaeoglobus fulgidus (strain ATCC

Query: 1 PHDVDHV 7
PH+VD+V
Sbjct: 271 PHNVDNV 277


>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 1 PHDVDHVTA 9
P D+DH A
Sbjct: 438 PWDIDHALA 446


>sp|KGSDH_SACS2|2,5-DIOXOPENTANOATE dehydrogenase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 PHDVDHVTA 9
P D DHV A
Sbjct: 24 PADKDHVLA 32


>sp|LEUC_METAC|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina

Query: 1 PHDVDHVTA 9
PH+VD+V +
Sbjct: 276 PHNVDNVKS 284


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 2 HDVDHVTA 9
HD++H+T
Sbjct: 118 HDIEHMTG 125


>sp|LEUC_METMA|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanosarcina mazei

Query: 1 PHDVDHV 7
PH+VD+V
Sbjct: 276 PHNVDNV 282


>sp|LEUC_PYRCJ|3-ISOPROPYLMALATE dehydratase large subunit|Pyrobaculum calidifontis (strain DSM

Query: 1 PHDVDHVTA 9
PH VD+V A
Sbjct: 270 PHSVDNVKA 278


>sp|THIC_METJA|PHOSPHOMETHYLPYRIMIDINE synthase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 DHVTAA 10
DH+TAA
Sbjct: 305 DHITAA 310


>sp|HBCL1_METS5|4-HYDROXYBUTYRATE--COA ligase 1|Metallosphaera sedula (strain ATCC 51363

Query: 1 PHDVDHVT 8
P++V H+T
Sbjct: 389 PYEVGHIT 396


>sp|THIC_METVS|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 5 DHVTAA 10
DH+TAA
Sbjct: 305 DHITAA 310


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 HDVDHVTA 9
+ +DH+TA
Sbjct: 103 YGIDHITA 110


>sp|LEUC_METTH|PROBABLE 3-isopropylmalate dehydratase large subunit|Methanothermobacter

Query: 1 PHDVDHV 7
PH+VD+V
Sbjct: 274 PHNVDNV 280


>sp|THIC_METMP|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 5 DHVTAA 10
DH+TAA
Sbjct: 305 DHITAA 310


>sp|THIC_METM6|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C6 /

Query: 5 DHVTAA 10
DH+TAA
Sbjct: 305 DHITAA 310


>sp|THIC_METM5|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C5 /

Query: 5 DHVTAA 10
DH+TAA
Sbjct: 305 DHITAA 310


>sp|LEUC_SACS2|3-ISOPROPYLMALATE dehydratase large subunit|Saccharolobus solfataricus (strain ATCC

Query: 1 PHDVDHV 7
PH VD+V
Sbjct: 274 PHSVDNV 280


>sp|THIC_METM7|PHOSPHOMETHYLPYRIMIDINE synthase|Methanococcus maripaludis (strain C7 /

Query: 5 DHVTAA 10
DH+TAA
Sbjct: 305 DHITAA 310


>sp|LEUC_SULTO|3-ISOPROPYLMALATE dehydratase large subunit|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 PHDVDHV 7
PH VD+V
Sbjct: 272 PHSVDNV 278




132|SequenceR|665|656|SNTRGPHDVD

>sp|YPV5B_METTF|UNCHARACTERIZED protein ORF5B|Methanothermobacter thermautotrophicus

Query: 4 RGPHDVD 10
RGPHD +
Sbjct: 122 RGPHDAN 128


>sp|THIC2_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NTRGPHDVD 10
N+R P D D
Sbjct: 398 NSRAPEDTD 406


>sp|DHQS_KORCO|3-DEHYDROQUINATE synthase|Korarchaeum cryptofilum (strain OPF8)

Query: 4 RGPHDVD 10
RGP DV+
Sbjct: 66 RGPEDVE 72


>sp|YPV5A_METTF|UNCHARACTERIZED protein ORF5A|Methanothermobacter thermautotrophicus

Query: 4 RGPHDVD 10
RGPHD +
Sbjct: 175 RGPHDAN 181


>sp|TRPC_METTH|INDOLE-3-GLYCEROL phosphate synthase|Methanothermobacter thermautotrophicus (strain

Query: 1 SNTRGPHDVD 10
S RGP D +
Sbjct: 210 SGVRGPEDAE 219


>sp|RIBL_METMJ|FAD synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 NTRGPHD 8
NTRGP D
Sbjct: 135 NTRGPPD 141




133|SequenceR|670|661|ANCLFSNTRG

>sp|FAEHP_METJA|BIFUNCTIONAL enzyme Fae/Hps|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ANCLFSNTR 9
NC+F+N R
Sbjct: 38 GNCVFANLR 46


>sp|CCA_THEVO|CCA-ADDING enzyme|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LFSNTRG 10
LFS TRG
Sbjct: 194 LFSTTRG 200


>sp|Y1515_METJA|UNCHARACTERIZED protein MJ1515|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCLFSN 7
NCLFS+
Sbjct: 167 NCLFSD 172


>sp|RTCB_METJA|TRNA-SPLICING ligase RtcB|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NCLFSNTR 9
NCL SN++
Sbjct: 97 NCLTSNSK 104


>sp|IF6_METVS|TRANSLATION initiation factor 6|Methanococcus vannielii (strain ATCC 35089

Query: 1 ANCLFSNTRG 10
+C+ +NT+G
Sbjct: 195 GSCILANTKG 204


>sp|EF2_THEGJ|ELONGATION factor 2|Thermococcus gammatolerans (strain DSM 15229

Query: 1 ANCLFSNTRG 10
N F NT+G
Sbjct: 541 GNMFFDNTKG 550


>sp|IF6_METMP|TRANSLATION initiation factor 6|Methanococcus maripaludis (strain DSM 14266

Query: 3 CLFSNTRG 10
C+ +NT+G
Sbjct: 197 CILANTKG 204




134|SequenceR|675|666|ALESGANCLF

>sp|DHQS_METBU|3-DEHYDROQUINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ALESGANCLF 10
LESGANC+
Sbjct: 24 GLESGANCVL 33


>sp|RBLL_ARCFU|RIBULOSE bisphosphate carboxylase-like protein|Archaeoglobus fulgidus

Query: 1 ALESGANCLF 10
A+E GANCL
Sbjct: 257 AIELGANCLL 266


>sp|BRIX_METKA|PROBABLE Brix domain-containing ribosomal biogenesis|Methanopyrus kandleri

Query: 1 ALESGANCLF 10
ALESGA LF
Sbjct: 47 ALESGAEVLF 56


>sp|DHQS_METMA|3-DEHYDROQUINATE synthase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ALESGANCLF 10
LESGA+C+
Sbjct: 25 GLESGADCVL 34


>sp|DHQS_METBF|3-DEHYDROQUINATE synthase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ALESGANCLF 10
LESGA+C+
Sbjct: 25 GLESGADCVL 34


>sp|DHQS_METAC|3-DEHYDROQUINATE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ALESGANCLF 10
LESGA+C+
Sbjct: 25 GLESGADCVL 34


>sp|DHQS_METAR|3-DEHYDROQUINATE synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ALESGANCLF 10
ALESGAN +
Sbjct: 24 ALESGANAVL 33


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ALESGANCL 9
ALESG +C+
Sbjct: 23 ALESGFDCV 31


>sp|DADD_METKA|5'-DEOXYADENOSINE deaminase|Methanopyrus kandleri (strain AV19 /

Query: 1 ALESGANCL 9
AL+SG CL
Sbjct: 113 ALKSGTTCL 121


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 1 ALESGANCLF 10
A+E G NC F
Sbjct: 45 AVEYGENCEF 54


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 1 ALESGANCLF 10
A+E G NC F
Sbjct: 45 AVEYGENCEF 54


>sp|END4_HALWD|PROBABLE endonuclease 4|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LESGANC 8
LE+G NC
Sbjct: 21 LENGGNC 27


>sp|GUAAB_METB6|GMP synthase [glutamine-hydrolyzing] subunit B|Methanoregula boonei

Query: 1 ALESGANCLF 10
A +SGA CL
Sbjct: 114 AKKSGATCLL 123


>sp|DHQS_METMJ|3-DEHYDROQUINATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 ALESGANCL 9
A+ESGA+ L
Sbjct: 19 AIESGADAL 27


>sp|HDRB2_METJA|COB--COM heterodisulfide reductase subunit B|Methanocaldococcus jannaschii

Query: 2 LESGANC 8
LE+GA+C
Sbjct: 221 LEAGADC 227


>sp|HDRB_METKA|COB--COM heterodisulfide reductase subunit B|Methanopyrus kandleri (strain

Query: 2 LESGANC 8
LE+GA+C
Sbjct: 229 LEAGADC 235




135|SequenceR|680|671|DNYLVALESG

>sp|THYX_SACS2|FLAVIN-DEPENDENT thymidylate synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 DNYLVALESG 10
DNY LESG
Sbjct: 126 DNYYTLLESG 135


>sp|LEUC_METB6|3-ISOPROPYLMALATE dehydratase large subunit|Methanoregula boonei (strain DSM 21154

Query: 1 DNYLVALESG 10
D YL ALE+G
Sbjct: 331 DEYLKALEAG 340


>sp|Y2663_HALWD|UPF0212 protein HQ_2663A|Haloquadratum walsbyi (strain DSM 16790

Query: 2 NYLVALESG 10
NYLVA+E+
Sbjct: 3 NYLVAMEAA 11


>sp|Y441_HALMA|UPF0212 protein rrnAC0441|Haloarcula marismortui (strain ATCC 43049

Query: 2 NYLVALESG 10
NYLVA+E+
Sbjct: 2 NYLVAMEAA 10


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 DNYLVALESG 10
D+YL+ +E G
Sbjct: 331 DDYLLGVEKG 340


>sp|PANB_HALSA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 DNYLVALESG 10
D+Y+ A+ESG
Sbjct: 247 DDYVDAVESG 256


>sp|PANB_HALS3|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DNYLVALESG 10
D+Y+ A+ESG
Sbjct: 247 DDYVDAVESG 256


>sp|CRTY_HALSA|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DNYLVA 6
DNYL+A
Sbjct: 53 DNYLIA 58


>sp|CRTY_HALS3|LYCOPENE beta-cyclase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DNYLVA 6
DNYL+A
Sbjct: 53 DNYLIA 58


>sp|PANB_HALMA|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 DNYLVALESG 10
D Y+ A+ESG
Sbjct: 242 DEYIDAVESG 251


>sp|Y879_HALSA|UPF0212 protein VNG_0879C|Halobacterium salinarum (strain ATCC 700922

Query: 2 NYLVALES 9
NY+VA+E+
Sbjct: 3 NYVVAMEA 10


>sp|ATGT_METMP|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DNYLVALESG 10
DN+L+ +SG
Sbjct: 552 DNFLIPAKSG 561


>sp|ATGT_METM7|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C7 /

Query: 1 DNYLVALESG 10
DN+L+ +SG
Sbjct: 552 DNFLIPAKSG 561


>sp|ATGT_METM6|TRNA-GUANINE(15) transglycosylase|Methanococcus maripaludis (strain C6 /

Query: 1 DNYLVALESG 10
DN+L+ +SG
Sbjct: 552 DNFLIPAKSG 561


>sp|Y527_METJA|UNCHARACTERIZED protein MJ0527|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NYLVALESG 10
NYL+ +E G
Sbjct: 78 NYLMGIEGG 86




136|SequenceR|685|676|ELVATDNYLV

>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 993 EIVVTDGYL 1001


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 992 EIVVTDGYL 1000


>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 993 EIVVTDGYL 1001


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 993 EIVVTDGYL 1001


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 993 EIVVTDGYL 1001


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 993 EIVVTDGYL 1001


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 993 EIVVTDGYL 1001


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELVATDNYL 9
E+V TD YL
Sbjct: 260 EVVGTDTYL 268


>sp|RPO3_HALMA|DNA-DIRECTED RNA polymerase subunit Rpo3|Haloarcula marismortui (strain ATCC

Query: 1 ELVATDNY 8
ELVATD +
Sbjct: 194 ELVATDEF 201


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 ELVATDNYL 9
E++ TD YL
Sbjct: 993 EIIVTDGYL 1001




137|SequenceR|690|681|ATHHSELVAT

>sp|KAE1B_THEAC|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 ATHHSELVAT 10
A HHSE++ T
Sbjct: 44 AVHHSEVIDT 53


>sp|RISB_STAMF|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Staphylothermus marinus (strain ATCC 43588

Query: 1 ATHHSELVAT 10
AT H ELVA+
Sbjct: 72 ATKHDELVAS 81


>sp|GCH1L_METJA|GTP cyclohydrolase 1 type 2|Methanocaldococcus jannaschii (strain ATCC

Query: 2 THHSELVA 9
THHS+++A
Sbjct: 197 THHSKILA 204


>sp|RISB_PYRAE|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ATHHSELVAT 10
AT H ELVAT
Sbjct: 72 ATKHDELVAT 81


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 ATHHSELV 8
A HHS+L+
Sbjct: 33 ALHHSDLI 40


>sp|RISB_SULTO|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 THHSELVAT 10
T H E+VAT
Sbjct: 77 TKHDEIVAT 85


>sp|RISB_SULAC|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 THHSELVAT 10
T H E+VAT
Sbjct: 80 TKHDEIVAT 88


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 THHSEL 7
THH EL
Sbjct: 966 THHQEL 971


>sp|MUTS2_HALSA|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ATHHSELVA 9
ATHH EL A
Sbjct: 738 ATHHHELTA 746


>sp|MUTS2_HALS3|DNA mismatch repair protein MutS|Halobacterium salinarum (strain ATCC

Query: 1 ATHHSELVA 9
ATHH EL A
Sbjct: 738 ATHHHELTA 746


>sp|ECFA_METMJ|ENERGY-COUPLING factor transporter ATP-binding protein|Methanoculleus marisnigri

Query: 1 ATHHSELVA 9
+THH +LVA
Sbjct: 194 STHHLDLVA 202


>sp|SYA_CENSY|ALANINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 2 THHSELVA 9
THHS L A
Sbjct: 622 THHSPLSA 629


>sp|RISB_PYRCJ|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 ATHHSELVA 9
AT H E+VA
Sbjct: 72 ATKHDEIVA 80


>sp|RISB_SACS2|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 THHSELVAT 10
T H ELVA+
Sbjct: 77 TKHDELVAS 85


>sp|RISB_PYRNV|6,7-DIMETHYL-8-RIBITYLLUMAZINE synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 ATHHSELVA 9
AT H ELVA
Sbjct: 72 ATKHDELVA 80




138|SequenceR|695|686|LQFALATHHS

>sp|Y1450_METJA|UNCHARACTERIZED protein MJ1450|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FALATHHS 10
F LATH+S
Sbjct: 235 FMLATHYS 242


>sp|Y277_SULAC|UPF0282 protein Saci_0277|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 LQFALATHH 9
LQ+A+ HH
Sbjct: 231 LQYAIIDHH 239


>sp|Y2322_SULTO|UPF0282 protein STK_23220|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 LQFALATHH 9
LQ+A+ HH
Sbjct: 231 LQYAIIDHH 239


>sp|DCDB_METTH|DCTP deaminase, dUMP-forming|Methanothermobacter thermautotrophicus

Query: 2 QFALATHH 9
+FALAT H
Sbjct: 82 EFALATTH 89


>sp|Y484_METBF|UPF0292 protein Mbar_A0484|Methanosarcina barkeri (strain Fusaro /

Query: 3 FALATHHS 10
F LATH S
Sbjct: 51 FELATHQS 58


>sp|TGT_ARCFU|PUTATIVE queuine tRNA-ribosyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 LQFALATHHS 10
L F LAT+H+
Sbjct: 364 LYFRLATYHN 373


>sp|Y4098_METAC|UPF0292 protein MA_4098|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 FALATHHS 10
F LAT HS
Sbjct: 51 FELATRHS 58




139|SequenceR|700|691|TDKVTLQFAL

>sp|AATB_PICTO|A-TYPE ATP synthase subunit B|Picrophilus torridus (strain ATCC 700027

Query: 1 TDKVTLQFA 9
TDK+ L+FA
Sbjct: 398 TDKLYLKFA 406




140|SequenceR|705|696|FINCKTDKVT

>sp|UREG_CENSY|UREASE accessory protein UreG|Cenarchaeum symbiosum (strain A)

Query: 1 FINCKTDK 8
F+NC TD+
Sbjct: 184 FVNCMTDE 191


>sp|BIOW_METMP|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FINCKTDKVT 10
FIN K +KVT
Sbjct: 48 FINLKVEKVT 57


>sp|BIOW_METM6|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 FINCKTDKVT 10
FIN K +KVT
Sbjct: 48 FINLKIEKVT 57


>sp|BIOW_METM5|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 FINCKTDKVT 10
FIN K +KVT
Sbjct: 48 FINLKIEKVT 57


>sp|BIOW_METM7|6-CARBOXYHEXANOATE--COA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 FINCKTDKVT 10
FIN K +KVT
Sbjct: 48 FINLKIEKVT 57


>sp|FWDA_METJA|PROTEIN FwdA|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FINCKTDKV 9
F+N TDKV
Sbjct: 371 FLNTNTDKV 379


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 INCKTDKVT 10
I C+TDKV+
Sbjct: 366 IVCETDKVS 374


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 FINCKTDKV 9
FIN K DK+
Sbjct: 50 FINIKIDKI 58


>sp|MTAD_HALWD|5-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE deaminase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 INCKTDKVT 10
+NC T K+T
Sbjct: 29 VNCITGKIT 37


>sp|UREG_HALWD|UREASE accessory protein UreG|Haloquadratum walsbyi (strain DSM 16790

Query: 1 FINCKT 6
F NCKT
Sbjct: 183 FTNCKT 188


>sp|CDC6A_HALSA|ORC1-TYPE DNA replication protein 10|Halobacterium salinarum (strain ATCC

Query: 1 FINCKT 6
++NCKT
Sbjct: 92 YLNCKT 97


>sp|PYRH_METBU|URIDYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 5 KTDKVT 10
KTDKVT
Sbjct: 219 KTDKVT 224


>sp|CSL4_ARCFU|EXOSOME complex component Csl4|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NCKTDKV 9
NCKT+ V
Sbjct: 145 NCKTEMV 151




141|SequenceR|710|701|RDINKFINCK

>sp|Y1187_METJA|UNCHARACTERIZED protein MJ1187|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 DINKFINC 9
DI KF NC
Sbjct: 79 DIKKFANC 86


>sp|Y650_METJA|UNCHARACTERIZED protein MJ0650|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 RDINKFINCK 10
DINK++N K
Sbjct: 156 EDINKYLNIK 165


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RDINKFIN 8
RD+N +IN
Sbjct: 246 RDVNVYIN 253


>sp|METK_SACS2|S-ADENOSYLMETHIONINE synthase|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|METK_SACI7|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|METK_SACI6|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|METK_SACI4|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|METK_SACI3|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|METK_SACI2|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|METK_SACI1|S-ADENOSYLMETHIONINE synthase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 2 DINKFINCK 10
D+N +IN K
Sbjct: 226 DVNHYINVK 234


>sp|Y978_PYRFU|UPF0252 protein PF0978|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RDINKFINC 9
+D+NK I C
Sbjct: 36 KDLNKAIKC 44


>sp|GATA_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 1 RDINKFIN 8
RD+N FI+
Sbjct: 37 RDVNAFIS 44


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 RDINKFIN 8
RD+N +IN
Sbjct: 603 RDVNYYIN 610


>sp|CPGS_METFV|CYCLIC 2,3-diphosphoglycerate synthetase|Methanothermus fervidus (strain

Query: 1 RDINKFIN 8
RD+ K+IN
Sbjct: 389 RDLKKYIN 396


>sp|GUAAA_THEKO|GMP synthase [glutamine-hydrolyzing] subunit A|Thermococcus

Query: 2 DINKFINC 9
DINK NC
Sbjct: 53 DINKTGNC 60


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DINKFINC 9
D+N FI C
Sbjct: 112 DVNLFIGC 119


>sp|NARH_HALMT|RESPIRATORY nitrate reductase subunit beta|Haloferax mediterranei (strain

Query: 2 DINKFINCK 10
D+NK I C+
Sbjct: 25 DLNKCIGCQ 33


>sp|PURQ_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurQ|Picrophilus torridus (strain ATCC 700027

Query: 2 DINKFINC 9
DINKFI+
Sbjct: 80 DINKFIDS 87


>sp|Y534_METFV|UNCHARACTERIZED protein Mfer_0534|Methanothermus fervidus (strain ATCC 43054

Query: 2 DINKFIN 8
DI+KF+N
Sbjct: 433 DIDKFLN 439


>sp|HEM1_IGNH4|GLUTAMYL-TRNA reductase|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 DINKFIN 8
++NKF+N
Sbjct: 328 ELNKFVN 334


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 3 INKFINC 9
+NK+ NC
Sbjct: 219 LNKYFNC 225


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 1 RDINKFINC 9
+++NKF+N
Sbjct: 99 KELNKFVNS 107


>sp|Y940_METJA|TPR repeat-containing protein MJ0940|Methanocaldococcus jannaschii

Query: 2 DINKFINC 9
DINK I C
Sbjct: 66 DINKSIEC 73




142|SequenceR|715|706|TRYHNRDINK

>sp|COXX2_CENSY|PROTOHEME IX farnesyltransferase 2|Cenarchaeum symbiosum (strain A)

Query: 1 TRYHNRDIN 9
T YH+RDI+
Sbjct: 67 TNYHDRDID 75


>sp|CS12F_MICX1|CRISPR-ASSOCIATED endodeoxyribonuclease Cas12f2|Micrarchaeota archaeon (strain

Query: 2 RYHNRDIN 9
RY+ RDIN
Sbjct: 513 RYYQRDIN 520


>sp|MVK_METTH|MEVALONATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RYHNRD 7
RYH RD
Sbjct: 111 RYHGRD 116


>sp|AROE_METS3|SHIKIMATE dehydrogenase (NADP(+))|Methanobrevibacter smithii (strain ATCC

Query: 5 NRDINK 10
NRDINK
Sbjct: 151 NRDINK 156


>sp|PUR2_METTH|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 YHNRDI 8
YH RDI
Sbjct: 413 YHRRDI 418


>sp|Y2172_ARCFU|UNCHARACTERIZED protein AF_2172|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RYHNRDINK 10
++H D+NK
Sbjct: 36 KFHGEDVNK 44


>sp|HIS8_HALMA|HISTIDINOL-PHOSPHATE aminotransferase|Haloarcula marismortui (strain ATCC 43049

Query: 2 RYHNRDINK 10
RYH+ ++N+
Sbjct: 124 RYHHGEVNE 132


>sp|Y516_ARCFU|UNCHARACTERIZED protein AF_0516|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RYHNRDINK 10
RY+ +INK
Sbjct: 15 RYYREEINK 23


>sp|PURL_PICTO|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Picrophilus torridus (strain ATCC 700027

Query: 3 YHNRDIN 9
YHN +IN
Sbjct: 615 YHNSNIN 621


>sp|METK_METAC|S-ADENOSYLMETHIONINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TRYHNRDIN 9
T Y RD+N
Sbjct: 241 THYTERDVN 249


>sp|TRM56_SACS2|TRNA (cytidine(56)-2'-O)-methyltransferase|Saccharolobus solfataricus

Query: 3 YHNRDIN 9
YHN D N
Sbjct: 103 YHNADYN 109




143|SequenceR|720|711|IAQRLTRYHN

>sp|NCPP_PYRAE|PROBABLE inosine/xanthosine triphosphatase|Pyrobaculum aerophilum (strain

Query: 3 QRLTRYH 9
+R+TRYH
Sbjct: 148 RRVTRYH 154


>sp|CUTB_SULAC|GLYCERALDEHYDE dehydrogenase medium chain|Sulfolobus acidocaldarius (strain ATCC

Query: 5 LTRYHN 10
LTRYH+
Sbjct: 74 LTRYHD 79


>sp|FLPA_HALWD|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Haloquadratum walsbyi (strain DSM

Query: 3 QRLTRYHN 10
QRL R+H+
Sbjct: 197 QRLDRFHD 204


>sp|THYX_HALSA|FLAVIN-DEPENDENT thymidylate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 1 IAQRLTRYH 9
IAQ LTR H
Sbjct: 54 IAQLLTRGH 62


>sp|DP2L_HALMA|DNA polymerase II large subunit|Haloarcula marismortui (strain ATCC 43049

Query: 1 IAQRLTRYH 9
+A+R+ YH
Sbjct: 1287 VAERIIEYH 1295




144|SequenceR|725|716|LVMDIIAQRL

>sp|ILVC_PYRNV|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum neutrophilum (strain DSM

Query: 1 LVMDIIAQR 9
L+MD+I QR
Sbjct: 234 LIMDLIWQR 242


>sp|ILVC_PYRCJ|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum calidifontis (strain DSM

Query: 1 LVMDIIAQR 9
L+MD+I QR
Sbjct: 234 LIMDLIWQR 242


>sp|ILVC_PYRAE|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum aerophilum (strain ATCC

Query: 1 LVMDIIAQR 9
L+MD+I QR
Sbjct: 234 LIMDLIWQR 242


>sp|ILVC_PYRAR|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum arsenaticum (strain DSM

Query: 1 LVMDIIAQR 9
L+MD+I QR
Sbjct: 234 LIMDLIWQR 242


>sp|COFG_METKA|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 LVMDIIAQRL 10
L+M+I+++RL
Sbjct: 127 LMMEILSERL 136


>sp|ILVC_PYRIL|KETOL-ACID reductoisomerase (NADP(+))|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LVMDIIAQR 9
L+MD+I QR
Sbjct: 234 LIMDLIWQR 242


>sp|RFRNP_METM5|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C5 /

Query: 2 VMDIIAQ 8
+MDIIAQ
Sbjct: 34 IMDIIAQ 40


>sp|RFRNP_METMP|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain DSM 14266

Query: 2 VMDIIAQ 8
+MDIIAQ
Sbjct: 34 IMDIIAQ 40


>sp|RFRNP_METM7|RNA-FREE ribonuclease P|Methanococcus maripaludis (strain C7 /

Query: 2 VMDIIAQ 8
+MDIIAQ
Sbjct: 34 IMDIIAQ 40


>sp|PYRH_METB6|URIDYLATE kinase|Methanoregula boonei (strain DSM 21154

Query: 2 VMDIIAQRL 10
V+DIIA R+
Sbjct: 183 VLDIIAARI 191




145|SequenceR|730|721|TMETALVMDI

***** No hits found ******


146|SequenceR|735|726|HEFHKTMETA

>sp|SRP54_METMA|SIGNAL recognition particle 54 kDa|Methanosarcina mazei (strain ATCC

Query: 2 EFHKTMETA 10
++HKTM+TA
Sbjct: 414 KYHKTMQTA 422


>sp|SRP54_METBF|SIGNAL recognition particle 54 kDa|Methanosarcina barkeri (strain Fusaro /

Query: 2 EFHKTMETA 10
++HKTM+TA
Sbjct: 414 KYHKTMQTA 422


>sp|SRP54_METAC|SIGNAL recognition particle 54 kDa|Methanosarcina acetivorans (strain ATCC

Query: 2 EFHKTMETA 10
++HKTM+TA
Sbjct: 411 KYHKTMQTA 419


>sp|AROD_METS3|3-DEHYDROQUINATE dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 HEFHKTME 8
H+FHKT E
Sbjct: 120 HDFHKTPE 127


>sp|CBIA_THEAC|COBYRINATE a,c-diamide synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 HEFHKT 6
HEFHK+
Sbjct: 386 HEFHKS 391


>sp|CBIA_THEVO|COBYRINATE a,c-diamide synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 HEFHKT 6
HEFH++
Sbjct: 386 HEFHRS 391


>sp|Y1626_METJA|UNCHARACTERIZED protein MJ1626|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HEFHKTME 8
+EF++TME
Sbjct: 504 YEFYRTME 511


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 HEFHKTM 7
HEFHK +
Sbjct: 263 HEFHKRL 269


>sp|MOAE_HALVD|PROBABLE molybdopterin synthase|Haloferax volcanii (strain ATCC 29605

Query: 1 HEFHKTMET 9
HE H T+ET
Sbjct: 125 HEPHVTLET 133


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 HEFHKTM 7
HE HKT+
Sbjct: 277 HEVHKTL 283


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 1 HEFHKTM 7
HE HKT+
Sbjct: 277 HEVHKTL 283




147|SequenceR|740|731|VFKNVHEFHK

>sp|RFRNP_METBU|RNA-FREE ribonuclease P|Methanococcoides burtonii (strain DSM 6242

Query: 1 VFKNVHEFHK 10
V+K +HEF K
Sbjct: 55 VYKELHEFAK 64


>sp|ASD_HALSA|PUTATIVE archaetidylserine decarboxylase proenzyme|Halobacterium salinarum

Query: 1 VFKNVHEFH 9
VF NVH H
Sbjct: 79 VFMNVHNVH 87


>sp|RPO1C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 4 NVHEFHK 10
N+HE HK
Sbjct: 275 NIHEVHK 281


>sp|RPO1C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1C|Halobacterium salinarum (strain ATCC

Query: 4 NVHEFHK 10
N+HE HK
Sbjct: 275 NIHEVHK 281


>sp|SYS_HALMA|SERINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 FKNVHEFHK 10
+ VH+FHK
Sbjct: 286 YVRVHQFHK 294


>sp|SYS_METMJ|SERINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 279 VHQFHK 284


>sp|SYS_AERPE|SERINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 302 VHQFHK 307


>sp|ASPD_METAC|L-ASPARTATE dehydrogenase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 VFKNVHE 7
+F+NVHE
Sbjct: 217 LFRNVHE 223


>sp|SYS_METAR|SERINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 279 VHQFHK 284


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 302 VHQFHK 307


>sp|SYS_DESA1|SERINE--TRNA ligase|Desulfurococcus amylolyticus (strain DSM 18924

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 301 VHQFHK 306


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 279 VHQFHK 284


>sp|SYS_THESM|SERINE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 VHEFHK 10
+HEFHK
Sbjct: 262 LHEFHK 267


>sp|SYS_SULTO|SERINE--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_PYRFU|SERINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_PYRAB|SERINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 302 VHQFHK 307


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 2 FKNVHE 7
F+N+HE
Sbjct: 643 FRNIHE 648


>sp|SYS_PYRHO|SERINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_SULAC|SERINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|GCSPB_THEAC|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 FKNVHEFH 9
F+N+H F
Sbjct: 94 FRNIHPFQ 101


>sp|IDI2_PYRAB|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Pyrococcus abyssi (strain GE5 /

Query: 2 FKNVHEFHK 10
F++VH HK
Sbjct: 29 FEDVHLIHK 37


>sp|SYS_STAMF|SERINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 301 VHQFHK 306


>sp|SYS_SACS2|SERINE--TRNA ligase|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYL2_SULTO|LEUCINE--TRNA ligase 2|Sulfurisphaera tokodaii (strain DSM 16993

Query: 5 VHEFHK 10
+HE+HK
Sbjct: 803 IHEYHK 808


>sp|SYS_SACI7|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_SACI6|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.4 /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_SACI4|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.14.25 /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_SACI3|SERINE--TRNA ligase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_SACI2|SERINE--TRNA ligase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|SYS_SACI1|SERINE--TRNA ligase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 5 VHEFHK 10
VH+FHK
Sbjct: 299 VHQFHK 304


>sp|CDC62_SACS2|ORC1-TYPE DNA replication protein 2|Saccharolobus solfataricus (strain ATCC

Query: 1 VFKNVHEF 8
VFK +HE+
Sbjct: 133 VFKMIHEY 140


>sp|AROD_METMP|3-DEHYDROQUINATE dehydratase|Methanococcus maripaludis (strain DSM 14266

Query: 2 FKNVHEFHK 10
FK++ EF K
Sbjct: 40 FKDIEEFSK 48


>sp|GCSPB_THEVO|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermoplasma

Query: 2 FKNVHEFH 9
F+N+H F
Sbjct: 94 FRNIHPFQ 101


>sp|ASD_METBU|PUTATIVE archaetidylserine decarboxylase proenzyme|Methanococcoides

Query: 1 VFKNVHEFH 9
VF NVH H
Sbjct: 82 VFMNVHNVH 90


>sp|NK_METJA|NUCLEOSIDE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VFKNVHEFHK 10
+F N HEF +
Sbjct: 183 LFMNKHEFER 192




148|SequenceR|745|736|KNISNVFKNV

>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 1 KNISNVFKNV 10
KN+ N+FKN+
Sbjct: 947 KNLLNIFKNI 956


>sp|GLCV_SACS2|GLUCOSE import ATP-binding protein GlcV|Saccharolobus solfataricus

Query: 1 KNISNVFK 8
KN+S VFK
Sbjct: 7 KNVSKVFK 14




149|SequenceR|750|741|EAAMPKNISN

>sp|PUS10_PICTO|TRNA pseudouridine synthase Pus10|Picrophilus torridus (strain ATCC

Query: 1 EAAMPK 6
EAAMPK
Sbjct: 221 EAAMPK 226


>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain ATCC

Query: 3 AMPKNIS 9
A+PKN+S
Sbjct: 240 ALPKNLS 246


>sp|PGP_SULTO|PHOSPHOGLYCOLATE phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 4 MPKNIS 9
MPKN+S
Sbjct: 136 MPKNVS 141


>sp|RL13_METST|LARGE ribosomal subunit protein uL13|Methanosphaera stadtmanae (strain

Query: 1 EAAMPKNIS 9
E A PKNI+
Sbjct: 118 EQAQPKNIT 126


>sp|TRUD_PICTO|PROBABLE tRNA pseudouridine synthase D|Picrophilus torridus (strain ATCC

Query: 3 AMPKNIS 9
A+PKN+S
Sbjct: 251 ALPKNLS 257




150|SequenceR|755|746|DSGEIEAAMP

>sp|MOAA_METTH|PROBABLE GTP 3',8-cyclase|Methanothermobacter thermautotrophicus (strain

Query: 1 DSGEIEAAMP 10
D GEIE P
Sbjct: 233 DGGEIEVVRP 242


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 2 SGEIEAAMP 10
SGE E A+P
Sbjct: 519 SGEFEVAVP 527


>sp|SYI_ARCFU|ISOLEUCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GEIEAAM 9
GE+EAAM
Sbjct: 785 GELEAAM 791


>sp|ASPD_METMA|L-ASPARTATE dehydrogenase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DSGEIEAAM 9
DSGEI+A +
Sbjct: 21 DSGEIDAEL 29


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 DSGEIEA 7
D+GEIEA
Sbjct: 457 DNGEIEA 463


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 DSGEIEA 7
D+GEIEA
Sbjct: 457 DNGEIEA 463




151|SequenceR|760|751|PNCECDSGEI

>sp|SYE_METST|GLUTAMATE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 CECDSGE 9
C+CD GE
Sbjct: 192 CKCDGGE 198


>sp|KPTA2_ARCFU|PROBABLE RNA 2'-phosphotransferase 2|Archaeoglobus fulgidus (strain ATCC

Query: 2 NCECDSGEI 10
+CEC GE+
Sbjct: 15 SCECGKGEV 23


>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 1 PNCECD 6
P CECD
Sbjct: 73 PVCECD 78


>sp|Y1051_ARCFU|UNCHARACTERIZED protein AF_1051|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PNCECDSGE 9
PN CDS +
Sbjct: 150 PNAVCDSAD 158


>sp|PRIS_METST|DNA primase small subunit PriS|Methanosphaera stadtmanae (strain ATCC

Query: 3 CECDSGEI 10
C+C GE+
Sbjct: 108 CDCAEGEV 115


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 3 CECDSGEI 10
CE +SGE+
Sbjct: 271 CEIESGEL 278


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 3 CECDSGEI 10
CE +SGE+
Sbjct: 271 CEIESGEL 278


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 5 CDSGEI 10
CD+GEI
Sbjct: 413 CDNGEI 418


>sp|NPD_SULAC|NAD-DEPENDENT protein deacetylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 PNCEC 5
P CEC
Sbjct: 151 PRCEC 155


>sp|RF1_HALVD|PEPTIDE chain release factor subunit|Haloferax volcanii (strain ATCC 29605

Query: 1 PNCECDSG 8
P ECD G
Sbjct: 351 PTHECDDG 358


>sp|PRIS_METTH|DNA primase small subunit PriS|Methanothermobacter thermautotrophicus

Query: 2 NCECD 6
+CECD
Sbjct: 107 SCECD 111


>sp|SYM_METLZ|METHIONINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 ECDSG 8
ECDSG
Sbjct: 155 ECDSG 159




152|SequenceR|765|756|FNKGAPNCEC

>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 3 KGAPNCEC 10
+GA CEC
Sbjct: 234 EGAERCEC 241


>sp|ILVC_SULTO|KETOL-ACID reductoisomerase (NADP(+))|Sulfurisphaera tokodaii (strain DSM

Query: 1 FNKGAP 6
+NKGAP
Sbjct: 295 YNKGAP 300


>sp|PURL_METBF|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina barkeri (strain Fusaro /

Query: 4 GAPNCE 9
GAP CE
Sbjct: 357 GAPTCE 362


>sp|PURL_METAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina acetivorans (strain ATCC 35395

Query: 4 GAPNCE 9
GAP CE
Sbjct: 357 GAPTCE 362


>sp|RL34_PYRNV|LARGE ribosomal subunit protein eL34|Pyrobaculum neutrophilum (strain

Query: 3 KGAPNC 8
KGAP C
Sbjct: 32 KGAPRC 37


>sp|PURL_METMA|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanosarcina mazei (strain ATCC BAA-159

Query: 4 GAPNCE 9
GAP CE
Sbjct: 357 GAPTCE 362


>sp|RS14Z_NANEQ|SMALL ribosomal subunit protein uS14|Nanoarchaeum equitans (strain

Query: 1 FNKGAPNCE 9
F KGA CE
Sbjct: 26 FGKGARRCE 34


>sp|PUS10_METKA|TRNA pseudouridine synthase Pus10|Methanopyrus kandleri (strain AV19 /

Query: 4 GAPNCE 9
G PNC+
Sbjct: 213 GCPNCD 218


>sp|MOAA_METAC|PROBABLE GTP 3',8-cyclase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 NKGAPNCEC 10
N+GA C C
Sbjct: 49 NEGADCCSC 57




153|SequenceR|770|761|IQNEPFNKGA

>sp|CBID_METST|COBALT-PRECORRIN-5B C(1)-methyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 IQNEPFNK 8
IQN PFNK
Sbjct: 372 IQNIPFNK 379


>sp|PRIS_METLZ|DNA primase small subunit PriS|Methanocorpusculum labreanum (strain

Query: 2 QNEPFNKG 9
+NEPF G
Sbjct: 268 ENEPFQAG 275


>sp|CHEF2_HALS3|TAXIS protein CheF2|Halobacterium salinarum (strain ATCC 29341

Query: 1 IQNEPFNKG 9
I ++PF KG
Sbjct: 122 ITDQPFEKG 130


>sp|DCHI_THEKO|DIACETYLCHITOBIOSE deacetylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 NEPFN 7
NEPFN
Sbjct: 25 NEPFN 29


>sp|PGK2_METTH|2-PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 4 EPFNKG 9
EPF+KG
Sbjct: 15 EPFSKG 20


>sp|PGK2_METFV|2-PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 4 EPFNKG 9
EPF+KG
Sbjct: 15 EPFSKG 20


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 IQNEPFNKG 9
+ NE FN G
Sbjct: 337 VDNEAFNTG 345


>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 4 EPFNKGA 10
EP+N+G+
Sbjct: 418 EPYNRGS 424




154|SequenceR|775|766|MRKILIQNEP

>sp|IF5A_THEAC|TRANSLATION initiation factor 5A|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 MRKILIQN 8
MRKI++QN
Sbjct: 122 MRKIMLQN 129


>sp|SURE_METTP|5'-NUCLEOTIDASE SurE|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 MRKILIQNE 9
MR+IL+ N+
Sbjct: 1 MRRILVTND 9


>sp|Y1287_METMA|UPF0313 protein MM_1287|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 RKILIQNEP 10
+ I+IQN+P
Sbjct: 281 KTIIIQNKP 289


>sp|CDC6N_HALMA|ORC1-TYPE DNA replication protein 14|Haloarcula marismortui (strain ATCC

Query: 1 MRKILIQNEP 10
+RK+L +N P
Sbjct: 42 LRKVLNENRP 51


>sp|RRP4_PYRFU|EXOSOME complex component Rrp4|Pyrococcus furiosus (strain ATCC 43587

Query: 1 MRKILIQN 8
MR+I +QN
Sbjct: 1 MRRIFVQN 8


>sp|RS4E_KORCO|SMALL ribosomal subunit protein eS4|Korarchaeum cryptofilum (strain

Query: 1 MRKILIQNEP 10
M+KIL+ +P
Sbjct: 68 MKKILVDGKP 77




155|SequenceR|780|771|ACKIMMRKIL

>sp|CMR3_SACS2|CRISPR system CMR subunit Cmr3|Saccharolobus solfataricus (strain ATCC

Query: 2 CKIMMRKIL 10
CK+ RKIL
Sbjct: 305 CKLAFRKIL 313




156|SequenceR|785|776|PNAVDACKIM

>sp|FEN_META3|FLAP endonuclease 1|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 PNAVDACK 8
PN VD CK
Sbjct: 129 PNTVDNCK 136


>sp|Y34A_METJA|UNCHARACTERIZED protein MJ0347.1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NAVDACKI 9
NA+D C I
Sbjct: 19 NAIDQCNI 26


>sp|TOP6B_HALMA|TYPE 2 DNA topoisomerase 6|Haloarcula marismortui (strain ATCC 43049

Query: 2 NAVDACK 8
NA+DAC+
Sbjct: 57 NALDACE 63


>sp|TOP6B_ARCFU|TYPE 2 DNA topoisomerase 6|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 NAVDACK 8
NA+DAC+
Sbjct: 40 NALDACE 46


>sp|MUTS_METBF|DNA mismatch repair protein MutS|Methanosarcina barkeri (strain Fusaro

Query: 1 PNAVDACKIM 10
P D CKI+
Sbjct: 592 PQLTDDCKIL 601


>sp|TOP6B_METBF|TYPE 2 DNA topoisomerase 6|Methanosarcina barkeri (strain Fusaro /

Query: 2 NAVDACK 8
NA+DAC+
Sbjct: 48 NALDACE 54


>sp|MUTS_METBU|DNA mismatch repair protein MutS|Methanococcoides burtonii (strain DSM

Query: 1 PNAVDACKIM 10
PN CKI+
Sbjct: 581 PNITSDCKIL 590


>sp|TOP6B_METMA|TYPE 2 DNA topoisomerase 6|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 NAVDACK 8
NA+DAC+
Sbjct: 48 NALDACE 54


>sp|RRP42_THEVO|EXOSOME complex component Rrp42|Thermoplasma volcanium (strain ATCC 51530

Query: 2 NAVDACKI 9
N +DAC I
Sbjct: 150 NLIDACTI 157




157|SequenceR|790|781|DLPRCPNAVD

>sp|NPD_PYRFU|NAD-DEPENDENT protein deacylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 DLPRCP 6
+LPRCP
Sbjct: 146 ELPRCP 151


>sp|NPD_PYRHO|NAD-DEPENDENT protein deacylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 DLPRCP 6
DLP+CP
Sbjct: 146 DLPKCP 151


>sp|IF2G_METJA|TRANSLATION initiation factor 2 subunit|Methanocaldococcus jannaschii (strain

Query: 3 PRCPNAV 9
PRCPN +
Sbjct: 71 PRCPNCL 77


>sp|NPD_PYRAB|NAD-DEPENDENT protein deacylase|Pyrococcus abyssi (strain GE5 /

Query: 1 DLPRCP 6
DLP+CP
Sbjct: 146 DLPKCP 151


>sp|HMDH_PYRHO|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 LPRCPNA 8
L RCPNA
Sbjct: 140 LIRCPNA 146


>sp|HMDH_PYRAB|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Pyrococcus abyssi (strain GE5 /

Query: 2 LPRCPNA 8
L RCPNA
Sbjct: 135 LIRCPNA 141


>sp|CYAS_METB6|CYSTEATE synthase|Methanoregula boonei (strain DSM 21154

Query: 1 DLPRCPNAV 9
D+P PNA+
Sbjct: 287 DMPDAPNAI 295


>sp|NPD_THEKO|NAD-DEPENDENT protein deacylase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 DLPRCP 6
+LP+CP
Sbjct: 147 ELPKCP 152


>sp|SYW1_HALSA|TRYPTOPHAN--TRNA ligase 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DLPRCPNAVD 10
D PRC A D
Sbjct: 274 DQPRCTEAAD 283


>sp|SYL_METJA|LEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PRCPNAVD 10
PRC N V+
Sbjct: 183 PRCDNPVE 190


>sp|TRUD_PYRNV|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum neutrophilum (strain DSM

Query: 1 DLPRCPN 7
DLP+ PN
Sbjct: 114 DLPKIPN 120


>sp|NPD_THESM|NAD-DEPENDENT protein deacylase|Thermococcus sibiricus (strain DSM 12597

Query: 1 DLPRCP 6
+LP+CP
Sbjct: 147 NLPKCP 152


>sp|DTDA_HALSA|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 PRCPNA 8
P CPNA
Sbjct: 101 PACPNA 106


>sp|DTDA_HALS3|D-AMINOACYL-TRNA deacylase|Halobacterium salinarum (strain ATCC 29341

Query: 3 PRCPNA 8
P CPNA
Sbjct: 101 PACPNA 106


>sp|UVRC_METMA|UVRABC system protein C|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPRCPNAVD 10
LP+ PN ++
Sbjct: 365 LPKIPNVIE 373


>sp|UVRC_METBF|UVRABC system protein C|Methanosarcina barkeri (strain Fusaro /

Query: 2 LPRCPNAVD 10
LP+ PN ++
Sbjct: 359 LPKLPNVIE 367


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LPRCPNAVD 10
LP+ PN ++
Sbjct: 359 LPKLPNVIE 367




158|SequenceR|795|786|WEICLDLPRC

>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 1 WEICLDL 7
WEICLD+
Sbjct: 1042 WEICLDM 1048


>sp|AATB_NATPD|A-TYPE ATP synthase subunit B|Natronomonas pharaonis (strain ATCC 35678

Query: 1 WEICLDLPR 9
WE+ DLP+
Sbjct: 437 WELLSDLPK 445


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 WEICLDLPRC 10
W++C+ RC
Sbjct: 440 WDVCIACGRC 449


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 WEICLDLP 8
WE+ DLP
Sbjct: 432 WELLADLP 439


>sp|PROA_METMA|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 WEICLD 6
W++C D
Sbjct: 245 WQVCFD 250


>sp|TOP1_PYRHO|DNA topoisomerase 1|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WEICLDL 7
+EICLD+
Sbjct: 670 FEICLDI 676


>sp|PMDHL_METTH|PHOSPHOMEVALONATE dehydratase large subunit|Methanothermobacter thermautotrophicus

Query: 3 ICLDLPRC 10
ICL P C
Sbjct: 294 ICLGCPHC 301


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 1 WEICLDLP 8
WEI +LP
Sbjct: 430 WEILAELP 437


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EICLDLP 8
+IC++LP
Sbjct: 570 DICMELP 576


>sp|PROA_METBF|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina barkeri (strain Fusaro /

Query: 1 WEICLD 6
W++C D
Sbjct: 245 WKVCFD 250


>sp|PROA_METAC|GAMMA-GLUTAMYL phosphate reductase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 WEICLD 6
W++C D
Sbjct: 245 WKVCFD 250


>sp|TOP1_PYRAB|DNA topoisomerase 1|Pyrococcus abyssi (strain GE5 /

Query: 2 EICLDL 7
EICLD+
Sbjct: 675 EICLDI 680


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 WEICLDLP 8
W++ DLP
Sbjct: 432 WDLLADLP 439


>sp|ASSTI_METAC|L-ASPARTATE semialdehyde sulfurtransferase iron-sulfur subunit|Methanosarcina

Query: 1 WEICLDLPRC 10
W +C+D +C
Sbjct: 102 WSLCVDEKKC 111


>sp|ACDA_METSH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothrix

Query: 1 WEICLDLPRC 10
+E+C+ RC
Sbjct: 438 YEVCVGCQRC 447




159|SequenceR|800|791|SIRGAWEICL

>sp|PURL_THEAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 IRGAWE 7
+RGAWE
Sbjct: 747 LRGAWE 752


>sp|TOP1_PYRFU|DNA topoisomerase 1|Pyrococcus furiosus (strain ATCC 43587

Query: 6 WEICL 10
WEICL
Sbjct: 1042 WEICL 1046


>sp|THII_THEKO|PROBABLE tRNA sulfurtransferase|Thermococcus kodakarensis (strain ATCC

Query: 2 IRGAWE 7
IRG+WE
Sbjct: 357 IRGSWE 362


>sp|PURL_METTH|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter thermautotrophicus

Query: 4 GAWEICL 10
GAW +C+
Sbjct: 466 GAWPVCI 472


>sp|PURL_METTM|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothermobacter marburgensis (strain ATCC

Query: 4 GAWEICL 10
GAW +C+
Sbjct: 466 GAWPLCI 472


>sp|Y3936_METAC|UPF0060 membrane protein MA_3936|Methanosarcina acetivorans (strain ATCC

Query: 2 IRGAWEICL 10
IRG + ICL
Sbjct: 19 IRGGYLICL 27


>sp|COFH_METMJ|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanoculleus marisnigri (strain

Query: 3 RGAWEI 8
RG WEI
Sbjct: 35 RGVWEI 40


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 2 IRGAWEIC 9
IRGA ++C
Sbjct: 267 IRGALKVC 274


>sp|THIC2_METBF|PHOSPHOMETHYLPYRIMIDINE synthase 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 SIRGAWEIC 9
S+RG E+C
Sbjct: 273 SVRGMKELC 281


>sp|THIC1_METMA|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SIRGAWEIC 9
S+RG E+C
Sbjct: 273 SVRGMKELC 281


>sp|THIC1_METAC|PHOSPHOMETHYLPYRIMIDINE synthase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 SIRGAWEIC 9
S+RG E+C
Sbjct: 273 SVRGMKELC 281




160|SequenceR|805|796|AFYEESIRGA

>sp|CMR1_SACS2|CRISPR system CMR subunit Cmr1|Saccharolobus solfataricus (strain ATCC

Query: 2 FYEESIR 8
FYEE++R
Sbjct: 28 FYEENVR 34


>sp|HMGCS_HALVD|HYDROXYMETHYLGLUTARYL-COA synthase|Haloferax volcanii (strain ATCC 29605

Query: 3 YEESIRG 9
YEE+IRG
Sbjct: 291 YEEAIRG 297


>sp|THII_THEVO|TRNA sulfurtransferase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 AFYEESIRG 9
A YEE ++G
Sbjct: 89 ALYEEKVKG 97


>sp|LADH_METMP|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain DSM 14266

Query: 1 AFYEESIRG 9
AFY + +RG
Sbjct: 105 AFYAKELRG 113


>sp|LADH_METM7|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C7 /

Query: 1 AFYEESIRG 9
AFY + +RG
Sbjct: 105 AFYAKELRG 113


>sp|LADH_METM5|LACTALDEHYDE dehydrogenase|Methanococcus maripaludis (strain C5 /

Query: 1 AFYEESIRG 9
AFY + +RG
Sbjct: 105 AFYAKELRG 113


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 AFYEESIRG 9
AFY +RG
Sbjct: 105 AFYSRELRG 113


>sp|EF2_KORCO|ELONGATION factor 2|Korarchaeum cryptofilum (strain OPF8)

Query: 3 YEESIRG 9
Y ES+RG
Sbjct: 470 YRESVRG 476


>sp|KDPA_HALSA|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 FYEESIRG 9
FYE +RG
Sbjct: 183 FYENVVRG 190


>sp|KDPA_HALS3|POTASSIUM-TRANSPORTING ATPase potassium-binding subunit|Halobacterium salinarum (strain

Query: 2 FYEESIRG 9
FYE +RG
Sbjct: 183 FYENVVRG 190




161|SequenceR|810|801|EEDTQAFYEE

>sp|FLAH_METJA|ARCHAEAL flagellar ATP-binding protein FlaH|Methanocaldococcus jannaschii

Query: 3 DTQAFYEE 10
+T+AFYE+
Sbjct: 114 ETRAFYEK 121


>sp|SYI_METTH|ISOLEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 EEDTQAFYEE 10
EE Q+F+EE
Sbjct: 16 EEKVQSFWEE 25


>sp|TIAS_SACI2|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Saccharolobus islandicus

Query: 1 EEDTQAFYEE 10
E + Q+F+EE
Sbjct: 416 ENNNQSFHEE 425




162|SequenceR|815|806|LGQRKEEDTQ

>sp|AROC_THEVO|CHORISMATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 QRKEED 8
QRKEED
Sbjct: 58 QRKEED 63


>sp|ENDA_PYRAB|TRNA-SPLICING endonuclease|Pyrococcus abyssi (strain GE5 /

Query: 1 LGQRKEED 8
LG+RK+ED
Sbjct: 72 LGKRKDED 79


>sp|ASSY_METHJ|ARGININOSUCCINATE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LGQRKEE 7
+GQRKEE
Sbjct: 39 VGQRKEE 45


>sp|BIOW_METVS|6-CARBOXYHEXANOATE--COA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GQRKEEDTQ 10
G R EEDT+
Sbjct: 131 GNRLEEDTE 139




163|SequenceR|820|811|PMVVPLGQRK

>sp|MCRX_METTM|METHYL-COENZYME M reductase II subunit|Methanothermobacter marburgensis (strain

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 65 VPLGQRK 71


>sp|MCRX_METTH|METHYL-COENZYME M reductase II subunit|Methanothermobacter thermautotrophicus

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 65 VPLGQRK 71


>sp|MCRX_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 65 VPLGQRK 71


>sp|MCRA_METVO|METHYL-COENZYME M reductase subunit alpha|Methanococcus voltae

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 66 VPLGQRK 72


>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 66 VPLGQRK 72


>sp|MCRX_METFV|METHYL-COENZYME M reductase II subunit|Methanothermus fervidus (strain ATCC 43054

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 66 VPLGQRK 72


>sp|MCRA_METKA|METHYL-COENZYME M reductase I subunit|Methanopyrus kandleri (strain AV19 /

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 65 VPLGQRK 71


>sp|MCRA_METJA|METHYL-COENZYME M reductase I subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 4 VPLGQRK 10
VPLGQRK
Sbjct: 65 VPLGQRK 71


>sp|DAPAL_THEAC|UNCHARACTERIZED DapA-like lyase Ta1157|Thermoplasma acidophilum (strain ATCC

Query: 1 PMVVPLGQ 8
PM+ P+GQ
Sbjct: 8 PMITPMGQ 15


>sp|Y2030_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 PMVVPLGQRK 10
P+V+ +GQR+
Sbjct: 414 PLVLSMGQRR 423


>sp|Y1893_SACS2|PUTATIVE ABC transporter ATP-binding protein|Saccharolobus solfataricus

Query: 1 PMVVPLGQRK 10
P+V+ +GQR+
Sbjct: 414 PLVLSMGQRR 423


>sp|Y1318_METJA|UNCHARACTERIZED protein MJ1318|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MVVPLGQR 9
M++P GQR
Sbjct: 165 MLIPKGQR 172


>sp|Y1452_METJA|UNCHARACTERIZED protein MJ1452|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 PMVVPLGQR 9
P+V+PL ++
Sbjct: 225 PLVIPLNKK 233


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 1 PMVVPLG 7
P+VVP+G
Sbjct: 248 PVVVPIG 254


>sp|Y4661_HALS3|UPF0146 protein OE_4661R|Halobacterium salinarum (strain ATCC 29341

Query: 1 PMVVPLGQRK 10
P+VVP+ +R+
Sbjct: 107 PVVVPVSERR 116


>sp|Y2609_HALSA|UPF0146 protein VNG_2609C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PMVVPLGQRK 10
P+VVP+ +R+
Sbjct: 107 PVVVPVSERR 116


>sp|SYW_ARCFU|TRYPTOPHAN--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PMVVPLG 7
P+VVP+G
Sbjct: 202 PVVVPVG 208


>sp|PIMT_METKA|PROTEIN-L-ISOASPARTATE O-methyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 MVVPLGQR 9
MV+P+G R
Sbjct: 179 MVIPVGDR 186


>sp|SYH_PYRFU|HISTIDINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 VVPLGQR 9
VVP+G+R
Sbjct: 342 VVPIGER 348


>sp|SYW_METMA|TRYPTOPHAN--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PMVVPLG 7
P+VVP+G
Sbjct: 205 PVVVPVG 211




164|SequenceR|825|816|NRDFVPMVVP

>sp|ARGB_METB6|ACETYLGLUTAMATE kinase|Methanoregula boonei (strain DSM 21154

Query: 1 NRDFVPMVVP 10
+RD++P++ P
Sbjct: 167 DRDYIPVISP 176


>sp|HUTU_HALSA|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 700922

Query: 1 NRDFVPMVV 9
+RDFVP VV
Sbjct: 264 DRDFVPDVV 272


>sp|HUTU_HALS3|PROBABLE urocanate hydratase|Halobacterium salinarum (strain ATCC 29341

Query: 1 NRDFVPMVV 9
+RDFVP VV
Sbjct: 264 DRDFVPDVV 272


>sp|NADK_PYRAB|NAD kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 RDFVPMVVP 10
R VPMVVP
Sbjct: 206 RTSVPMVVP 214


>sp|GLCAE_SULAC|D-GLUCOSAMINE-6-PHOSPHATE 4-epimerase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 FVPMVVP 10
F+P+V+P
Sbjct: 230 FIPIVIP 236


>sp|HPRT_METPW|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobacterium paludis (strain DSM

Query: 3 DFVPMVVP 10
D VP+VVP
Sbjct: 29 DGVPLVVP 36


>sp|Y871_METJA|UNCHARACTERIZED protein MJ0871|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FVPMVVP 10
F+P+VVP
Sbjct: 116 FIPVVVP 122


>sp|GYAR_THEON|GLYOXYLATE reductase|Thermococcus onnurineus (strain NA1)

Query: 3 DFVPMVVP 10
DFV +VVP
Sbjct: 206 DFVVLVVP 213


>sp|SYFB_METMJ|PHENYLALANINE--TRNA ligase beta subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NRDFVPM 7
NR FVP+
Sbjct: 155 NRSFVPL 161


>sp|RS2_THEVO|SMALL ribosomal subunit protein uS2|Thermoplasma volcanium (strain ATCC

Query: 3 DFVPMVVP 10
DFV +V+P
Sbjct: 148 DFVDLVIP 155




165|SequenceR|830|821|PISCTNRDFV

>sp|Y081_METMA|UPF0210 protein MM_0081|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 SCTNRDFV 10
SC +RDFV
Sbjct: 88 SCRSRDFV 95


>sp|LEUC1_PYRFU|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus furiosus (strain ATCC 43587

Query: 2 ISCTNRDFV 10
+S TNR+FV
Sbjct: 381 VSTTNRNFV 389


>sp|LEUC1_PYRAB|3-ISOPROPYLMALATE dehydratase large subunit 1|Pyrococcus abyssi (strain GE5 /

Query: 2 ISCTNRDFV 10
+S TNR+FV
Sbjct: 380 VSTTNRNFV 388


>sp|DHYS2_METMA|PROBABLE deoxyhypusine synthase 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 ISCTNRDFV 10
ISC++R+F+
Sbjct: 151 ISCSSREFM 159


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 SCTNRDF 9
SCT+RD+
Sbjct: 251 SCTSRDY 257


>sp|G6PI_METMP|PROBABLE glucose-6-phosphate isomerase|Methanococcus maripaludis (strain DSM

Query: 1 PISCTNRD 8
P+SCT+ D
Sbjct: 208 PLSCTSVD 215


>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 ISCTNRDFV 10
I+C++R+F+
Sbjct: 151 ITCSSREFM 159


>sp|Y832_METJA|UNCHARACTERIZED protein MJ0832|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 ISCTNRDFV 10
IS TN++F+
Sbjct: 1303 ISSTNKEFI 1311


>sp|PYRC_METTH|DIHYDROOROTASE thermautotrophicus (strain ATCC 29096

Query: 2 ISCTNRDFV 10
+ C NRD V
Sbjct: 168 VHCENRDVV 176


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 SCTNRDFV 10
SC ++DFV
Sbjct: 99 SCRSQDFV 106




166|SequenceR|835|826|SIQSKPISCT

***** No hits found ******


167|SequenceR|840|831|FYDIFSIQSK

>sp|DHYS2_METAC|PROBABLE deoxyhypusine synthase 2|Methanosarcina acetivorans (strain ATCC

Query: 2 YDIFSIQSK 10
YDIF+++ +
Sbjct: 125 YDIFAVEEE 133


>sp|G6PI_METJA|GLUCOSE-6-PHOSPHATE isomerase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 YDIFSI 7
YDIFSI
Sbjct: 166 YDIFSI 171




168|SequenceR|845|836|FMDTIFYDIF

>sp|SPSS1_METAR|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase 1|Methanocella arvoryzae (strain DSM 22066

Query: 1 FMDTIFYDI 9
F T+FYDI
Sbjct: 319 FEGTVFYDI 327


>sp|Y934_METJA|UNCHARACTERIZED polyferredoxin-like protein MJ0934|Methanocaldococcus jannaschii

Query: 1 FMDTIFYDIF 10
FM+ FY IF
Sbjct: 3 FMEEEFYKIF 12


>sp|CAS1A_PYRAE|CRISPR-ASSOCIATED endonuclease Cas1 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FMDTIFYD 8
F+D +F+D
Sbjct: 59 FIDVVFFD 66


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 3 DTIFYDI 9
DTI YD+
Sbjct: 157 DTILYDL 163


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 TIFYDIF 10
TI+YDI+
Sbjct: 727 TIYYDIY 733


>sp|TRMY_METM5|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 DTIFYDIF 10
DTIFY +
Sbjct: 49 DTIFYSVL 56


>sp|TRMY_METVS|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 DTIFYDI 9
DTIFY +
Sbjct: 49 DTIFYSV 55


>sp|TRMY_META3|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus aeolicus

Query: 3 DTIFYDI 9
DTIFY +
Sbjct: 49 DTIFYSV 55


>sp|TRMY_METMP|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 DTIFYDI 9
DTIFY +
Sbjct: 49 DTIFYSV 55


>sp|TRMY_METM6|TRNA (pseudouridine(54)-N(1))-methyltransferase|Methanococcus

Query: 3 DTIFYDI 9
DTIFY +
Sbjct: 49 DTIFYSV 55




169|SequenceR|850|841|ADWADFMDTI

>sp|DAPB_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 ADWADFMDTI 10
A W DF DT+
Sbjct: 237 AGWYDFEDTV 246


>sp|SYS_METHJ|SERINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 DWADF 6
DWADF
Sbjct: 150 DWADF 154


>sp|PYRG_METKA|CTP synthase|Methanopyrus kandleri (strain AV19 /

Query: 1 ADWADFMDTI 10
+DW DF+ I
Sbjct: 274 SDWLDFVTRI 283


>sp|GATB_METKA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 DWADFMDTI 10
+WADF + +
Sbjct: 304 EWADFFEEV 312


>sp|THTR_METTH|PUTATIVE thiosulfate sulfurtransferase|Methanothermobacter

Query: 3 WADFMD 8
WAD MD
Sbjct: 202 WADLMD 207


>sp|AROE_AERPE|SHIKIMATE dehydrogenase (NADP(+))|Aeropyrum pernix (strain ATCC 700893

Query: 2 DWADFMDTI 10
DW F+D++
Sbjct: 99 DWKGFLDSL 107


>sp|PAN_METTH|PROTEASOME-ACTIVATING nucleotidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 ADFMDTI 10
ADFMD +
Sbjct: 383 ADFMDAV 389


>sp|SYA_METTP|ALANINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 DWADFMDTI 10
DW + M+TI
Sbjct: 398 DWRERMETI 406


>sp|AAT_SACS2|ASPARTATE aminotransferase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 ADWADFM 7
+DW DF+
Sbjct: 228 SDWRDFL 234


>sp|Y2119_ARCFU|UNCHARACTERIZED protein AF_2119|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ADWADFMDT 9
A W ++MDT
Sbjct: 548 AGWRNYMDT 556


>sp|RS19E_METJA|SMALL ribosomal subunit protein eS19|Methanocaldococcus jannaschii

Query: 2 DWADFMDT 9
+W DF+ T
Sbjct: 29 EWVDFVKT 36


>sp|RS19E_HALMA|SMALL ribosomal subunit protein eS19|Haloarcula marismortui (strain

Query: 2 DWADFMDT 9
DWA+F T
Sbjct: 30 DWAEFTKT 37


>sp|ARSA_HALSA|PUTATIVE arsenical pump-driving ATPase|Halobacterium salinarum (strain ATCC

Query: 1 ADWADFMD 8
+DW FMD
Sbjct: 496 SDWKGFMD 503


>sp|PORA_PYRFU|PYRUVATE synthase subunit PorA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 WADFMDTI 10
W D+ DTI
Sbjct: 118 WNDWQDTI 125




170|SequenceR|855|846|PLHAFADWAD

>sp|AATA_CENSY|A-TYPE ATP synthase subunit A|Cenarchaeum symbiosum (strain A)

Query: 2 LHAFADWAD 10
LH A WAD
Sbjct: 244 LHQIAKWAD 252


>sp|AATA_NITMS|A-TYPE ATP synthase subunit A|Nitrosopumilus maritimus (strain SCM1)

Query: 2 LHAFADWAD 10
LH A WAD
Sbjct: 244 LHQIAKWAD 252


>sp|Y565_METJA|UNCHARACTERIZED protein MJ0565|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHAFADWAD 10
L F DWAD
Sbjct: 107 LLGFEDWAD 115


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 3 HAFADWA 9
H F DWA
Sbjct: 440 HMFGDWA 446


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 3 HAFADWA 9
H F DWA
Sbjct: 440 HMFGDWA 446


>sp|SYL_NANEQ|LEUCINE--TRNA ligase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PLHAFADW 8
P H F +W
Sbjct: 122 PFHKFVEW 129


>sp|Y380_METJA|UNCHARACTERIZED protein MJ0380|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LHAFADW 8
L AFADW
Sbjct: 102 LWAFADW 108


>sp|SYP_METMA|PROLINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PLHAFADW 8
P AF+DW
Sbjct: 12 PKEAFSDW 19


>sp|Y1316_METTH|UPF0215 protein MTH_1316|Methanothermobacter thermautotrophicus (strain

Query: 3 HAFADW 8
H F+DW
Sbjct: 129 HRFSDW 134


>sp|RGYR_PYRFU|REVERSE gyrase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 HAFADWAD 10
H F DW +
Sbjct: 727 HQFVDWEE 734


>sp|AATA_AERPE|A-TYPE ATP synthase subunit A|Aeropyrum pernix (strain ATCC 700893

Query: 2 LHAFADWAD 10
LH+ A W++
Sbjct: 251 LHSLAQWSE 259


>sp|CBIM_METV3|PUTATIVE cobalt transport protein CbiM|Methanococcus voltae (strain ATCC

Query: 5 FADWA 9
FADWA
Sbjct: 146 FADWA 150


>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 HAFADW 8
H F DW
Sbjct: 730 HQFVDW 735


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 HAFADW 8
H F DW
Sbjct: 728 HQFVDW 733


>sp|RGYR_PYRAB|REVERSE gyrase|Pyrococcus abyssi (strain GE5 /

Query: 3 HAFADW 8
H F DW
Sbjct: 727 HQFVDW 732


>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC

Query: 4 AFADWA 9
AFADWA
Sbjct: 25 AFADWA 30


>sp|IDI2_METKA|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanopyrus kandleri (strain AV19 /

Query: 3 HAFADWA 9
+AF+DW
Sbjct: 236 YAFSDWG 242


>sp|XACG_HALVD|XYLOSE/ARABINOSE-BINDING protein XacG|Haloferax volcanii (strain ATCC 29605

Query: 1 PLHAFADW 8
P+ +FA+W
Sbjct: 129 PMSSFANW 136




171|SequenceR|860|851|HQMLAPLHAF

>sp|EF2_STAMF|ELONGATION factor 2|Staphylothermus marinus (strain ATCC 43588

Query: 2 QMLAPLH 8
Q LAPLH
Sbjct: 240 QKLAPLH 246




172|SequenceR|865|856|YNDALHQMLA

>sp|PGK2_METJA|2-PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 YNDALHQM 8
YN+ LH+M
Sbjct: 221 YNEELHKM 228


>sp|AMPD_ARCFU|ANHYDROMEVALONATE phosphate decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 YNDALHQML 9
YN ++H+ML
Sbjct: 147 YNASIHRML 155


>sp|CARB_METBF|CARBAMOYL phosphate synthase large chain|Methanosarcina barkeri (strain

Query: 2 NDALHQML 9
+DA HQML
Sbjct: 257 SDAEHQML 264


>sp|SYW_SULAC|TRYPTOPHAN--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NDALHQML 9
ND LH ML
Sbjct: 43 NDELHVML 50


>sp|SYW_SULTO|TRYPTOPHAN--TRNA ligase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NDALHQML 9
ND LH ML
Sbjct: 43 NDELHVML 50


>sp|THSA_SULAC|CHAPERONIN subunit alpha|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 NDALHQM 8
NDALH +
Sbjct: 398 NDALHSL 404


>sp|HFLX_NITMS|GTPASE HflX|Nitrosopumilus maritimus (strain SCM1)

Query: 1 YNDALHQM 8
YND H+M
Sbjct: 150 YNDIKHRM 157


>sp|THSA_SULTO|CHAPERONIN subunit alpha|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 NDALHQM 8
NDALH +
Sbjct: 398 NDALHSL 404




173|SequenceR|870|861|TKWHKYNDAL

>sp|SMC_PYRFU|CHROMOSOME partition protein Smc|Pyrococcus furiosus (strain ATCC 43587

Query: 1 TKWHKYNDAL 10
T+W K DAL
Sbjct: 350 TRWKKRRDAL 359


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 2 KWHKYN 7
+WH YN
Sbjct: 24 RWHDYN 29


>sp|HDRC1_METJA|COB--COM heterodisulfide reductase iron-sulfur subunit|Methanocaldococcus

Query: 4 HKYNDAL 10
HKY DAL
Sbjct: 153 HKYPDAL 159


>sp|GLMS_HALSA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Halobacterium salinarum (strain ATCC

Query: 1 TKWHKYNDA 9
T+W YND
Sbjct: 214 TEWTVYNDG 222


>sp|Y755_METJA|UNCHARACTERIZED protein MJ0755|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TKWHKYNDAL 10
T+W YN++L
Sbjct: 56 TEWGIYNESL 65


>sp|NIKR_SACS2|PUTATIVE nickel-responsive regulator|Saccharolobus solfataricus (strain

Query: 4 HKYNDAL 10
H+YND++
Sbjct: 74 HEYNDSI 80


>sp|SYM_THEPD|METHIONINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 2 KWHKYNDAL 10
+WH+ N+A+
Sbjct: 520 RWHEINEAV 528


>sp|PSA2_HALVD|PROTEASOME subunit alpha 2|Haloferax volcanii (strain ATCC 29605

Query: 2 KWHKYNDAL 10
K HK +DAL
Sbjct: 67 KLHKLDDAL 75


>sp|AATA_IGNH4|A-TYPE ATP synthase subunit A|Ignicoccus hospitalis (strain KIN4/I /

Query: 2 KWHKYNDAL 10
KW +Y D +
Sbjct: 461 KWKEYRDEM 469




174|SequenceR|875|866|KLDDLTKWHK

>sp|RFCL_HALLT|REPLICATION factor C large subunit|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 DDLTKW 8
DDLTKW
Sbjct: 266 DDLTKW 271


>sp|IF2P_HYPBU|PROBABLE translation initiation factor IF-2|Hyperthermus butylicus (strain

Query: 2 LDDLTKWHK 10
L+D KW+K
Sbjct: 449 LEDFEKWYK 457


>sp|RS8_CALMQ|SMALL ribosomal subunit protein uS8|Caldivirga maquilingensis (strain

Query: 1 KLDDLTKWHK 10
K+D+L KW +
Sbjct: 82 KVDELQKWEE 91


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 1 KLDDLTKWH 9
KLDD+T+ H
Sbjct: 80 KLDDITQKH 88


>sp|Y1671_PYRHO|UPF0173 metal-dependent hydrolase PH1671|Pyrococcus horikoshii (strain ATCC

Query: 1 KLDDLTKWH 9
KLDD+T +H
Sbjct: 128 KLDDVTIYH 136


>sp|PURL_METS5|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Metallosphaera sedula (strain ATCC 51363

Query: 1 KLDDLTKW 8
KLDD KW
Sbjct: 125 KLDDKGKW 132


>sp|AATA_METKA|A-TYPE ATP synthase subunit A|Methanopyrus kandleri (strain AV19 /

Query: 2 LDDLTKW 8
LDD+ KW
Sbjct: 442 LDDVEKW 448


>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KLDDLTKWHK 10
K DD +W K
Sbjct: 346 KFDDYIRWKK 355


>sp|AATA_METJA|A-TYPE ATP synthase subunit A|Methanocaldococcus jannaschii (strain ATCC

Query: 2 LDDLTKW 8
+DD+T+W
Sbjct: 440 IDDVTEW 446


>sp|RS3A_METKA|SMALL ribosomal subunit protein eS1|Methanopyrus kandleri (strain AV19

Query: 2 LDDLTKWH 9
LDD+TK H
Sbjct: 49 LDDITKHH 56


>sp|Y2548_HALWD|DUF123 domain-containing protein HQ_2548A|Haloquadratum walsbyi (strain

Query: 2 LDDLTKWH 9
+ D+T WH
Sbjct: 82 IHDVTHWH 89


>sp|PSTB_PYRAB|PHOSPHATE import ATP-binding protein PstB|Pyrococcus abyssi (strain GE5 /

Query: 1 KLDDLTKW 8
+LD++ KW
Sbjct: 121 ELDEIVKW 128


>sp|METK_THEON|S-ADENOSYLMETHIONINE synthase|Thermococcus onnurineus (strain NA1)

Query: 2 LDDLTKWHK 10
LDD+TK K
Sbjct: 387 LDDITKIQK 395


>sp|SYC_PYRCJ|CYSTEINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 2 LDDLTKW 8
+DD+ KW
Sbjct: 122 VDDMVKW 128


>sp|ARLY_PYRIL|ARGININOSUCCINATE lyase|Pyrobaculum islandicum (strain DSM 4184

Query: 2 LDDLTKWH 9
+DDL +W+
Sbjct: 247 VDDLIRWN 254


>sp|SYI_METMJ|ISOLEUCINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 722 LEDLSRWY 729


>sp|AATA_META3|A-TYPE ATP synthase subunit A|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 LDDLTKWHK 10
LDD+ W K
Sbjct: 439 LDDIEDWWK 447


>sp|RL2_SULTO|LARGE ribosomal subunit protein uL2|Sulfurisphaera tokodaii (strain DSM

Query: 1 KLDDLTKWH 9
KLDD TK++
Sbjct: 58 KLDDGTKFY 66


>sp|CS2H_SACS2|CARBON disulfide hydrolase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 DDLTKWHK 10
+D TKW K
Sbjct: 130 EDFTKWFK 137


>sp|SYP_CENSY|PROLINE--TRNA ligase|Cenarchaeum symbiosum (strain A)

Query: 1 KLDDLTKWH 9
K DD ++W+
Sbjct: 9 KSDDFSEWY 17


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 719 LEDLSRWY 726


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 LDDLTKWH 9
LD+L++W+
Sbjct: 724 LDELSRWY 731


>sp|SYI_METTP|ISOLEUCINE--TRNA ligase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 717 LEDLSRWY 724


>sp|SYI_METHJ|ISOLEUCINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 722 LEDLSRWY 729


>sp|RFCL_HALWD|REPLICATION factor C large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 3 DDLTKW 8
DDL KW
Sbjct: 260 DDLLKW 265


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 719 LEDLSRWY 726


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 719 LEDLSRWY 726


>sp|SYI_METBU|ISOLEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 719 LEDLSRWY 726


>sp|SYI_METB6|ISOLEUCINE--TRNA ligase|Methanoregula boonei (strain DSM 21154

Query: 2 LDDLTKWH 9
L+DL++W+
Sbjct: 721 LEDLSRWY 728




175|SequenceR|885|871|SDSPLRLSKCKLDDL

>sp|ARGB_METMA|ACETYLGLUTAMATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 DSPLRLSKCKLDDL 15
D R+S+ KLDD+
Sbjct: 222 DPGSRISRVKLDDI 235


>sp|DNAK_NITMS|CHAPERONE protein DnaK|Nitrosopumilus maritimus (strain SCM1)

Query: 5 LRLSKCKLDDL 15
LRL++ KLD+L
Sbjct: 275 LRLTRSKLDEL 285


>sp|SYC_THEKO|CYSTEINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 6 RLSKCKLDDL 15
+LSK KL+DL
Sbjct: 154 KLSKVKLEDL 163


>sp|SYC_THEGJ|CYSTEINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 6 RLSKCKLDDL 15
+LSK KL+DL
Sbjct: 154 KLSKIKLEDL 163


>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 1 SDSPLRLSK 9
SDSPL +S+
Sbjct: 346 SDSPLEISR 354


>sp|SYFB_THESM|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus sibiricus (strain DSM 12597

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDI 38


>sp|DPHB_PYRAE|DIPHTHINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 PLRLSKCKLDD 14
P+RL++ L+D
Sbjct: 50 PIRLTRADLED 60


>sp|DNLI_THEON|DNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 DSPLRLSKCKLDDL 15
D+P R + KL+++
Sbjct: 354 DTPFRERRAKLEEI 367


>sp|Y055_KORCO|UPF0173 metal-dependent hydrolase Kcr_0055|Korarchaeum cryptofilum

Query: 3 SPLRLSKCKLDDL 15
SP+++ +CK D+
Sbjct: 32 SPIKIEECKGADV 44


>sp|SYFB_THEON|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus onnurineus (strain NA1)

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDV 38


>sp|SYFB_THEKO|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus kodakarensis (strain ATCC

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDV 38


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDV 38


>sp|SYFB_PYRFU|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus furiosus (strain ATCC 43587

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDV 38


>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDV 38


>sp|SYFB_THEGJ|PHENYLALANINE--TRNA ligase beta subunit|Thermococcus gammatolerans (strain DSM 15229

Query: 8 SKCKLDDL 15
+KC+LDD+
Sbjct: 31 AKCELDDV 38


>sp|PHR_METTH|DEOXYRIBODIPYRIMIDINE photo-lyase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 PLRLSKCKLDDL 15
PLR+ K+D L
Sbjct: 176 PLRMRTLKMDSL 187


>sp|IDI2_METMP|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanococcus maripaludis (strain DSM 14266

Query: 7 LSKCKLDDL 15
+S C LDD+
Sbjct: 40 ISNCDLDDI 48


>sp|DNAK_CENSY|CHAPERONE protein DnaK|Cenarchaeum symbiosum (strain A)

Query: 5 LRLSKCKLDDL 15
LRL++ KL++L
Sbjct: 274 LRLTRAKLEEL 284


>sp|Y2151_THEKO|PUTATIVE transcriptional regulatory protein TK2151|Thermococcus kodakarensis

Query: 5 LRLSKCKLDDL 15
LR+S+C L+D
Sbjct: 128 LRVSECILEDF 138


>sp|HDRA_METTM|H(2):COB-COM heterodisulfide,ferredoxin reductase subunit A|Methanothermobacter

Query: 4 PLRLSKCKLDD 14
PL SK +DD
Sbjct: 142 PLEASKVSVDD 152




176|SequenceR|885|876|SDSPLRLSKC

>sp|Y3388_METAC|UNCHARACTERIZED serpin-like protein MA_3388|Methanosarcina acetivorans (strain ATCC

Query: 1 SDSPLRLSK 9
SDSPL +S+
Sbjct: 346 SDSPLEISR 354


>sp|GLMS_METTH|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanothermobacter

Query: 2 DSPLRLSKC 10
D P L+KC
Sbjct: 578 DKPKNLAKC 586




THE END