PDE8B_HUMAN Blast Output
Archaea
1|Sequence|1|10|MGCAPSIHVS

>sp|PYRC_AERPE|DIHYDROOROTASE pernix (strain ATCC 700893

Query: 2 GCAPSIHVS 10
GC P +H++
Sbjct: 215 GCKPRVHIT 223


>sp|HUTH_HALSA|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 700922

Query: 3 CAPSIH 8
CAP+IH
Sbjct: 239 CAPAIH 244


>sp|HUTH_HALS3|PROBABLE histidine ammonia-lyase|Halobacterium salinarum (strain ATCC 29341

Query: 3 CAPSIH 8
CAP+IH
Sbjct: 239 CAPAIH 244


>sp|SALAC_HALSA|SALACTIN salinarum (strain ATCC 700922

Query: 1 MGCAPSI 7
MGC P I
Sbjct: 311 MGCIPGI 317




2|Sequence|6|15|SIHVSQSGVI

>sp|DNLI_PYRAR|DNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 IHVSQSGV 9
IH+SQSGV
Sbjct: 259 IHISQSGV 266


>sp|VHCA_METVO|F420-NON-REDUCING hydrogenase vhc subunit A|Methanococcus voltae

Query: 1 SIHVSQSG 8
SIHV Q G
Sbjct: 461 SIHVCQGG 468




3|Sequence|11|20|QSGVIYCRDS

>sp|Y1627_PYRAE|PUTATIVE HTH-type transcriptional regulatory protein|Pyrobaculum

Query: 1 QSGVIYCRD 9
Q GV+Y RD
Sbjct: 84 QRGVVYLRD 92


>sp|Y658_METJA|UNCHARACTERIZED protein MJ0658|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QSGVIYCRD 9
+ GVIY RD
Sbjct: 277 KEGVIYARD 285


>sp|GLYA_METTM|SERINE hydroxymethyltransferase|Methanothermobacter marburgensis (strain

Query: 1 QSGVIYCRD 9
Q G+I CR+
Sbjct: 233 QGGIILCRE 241


>sp|GLYA_METTH|SERINE hydroxymethyltransferase|Methanothermobacter thermautotrophicus

Query: 1 QSGVIYCRD 9
Q G+I CR+
Sbjct: 233 QGGIILCRE 241


>sp|SYI_PICTO|ISOLEUCINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 6 YCRDS 10
YCRDS
Sbjct: 124 YCRDS 128


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 6 YCRDS 10
YCRDS
Sbjct: 123 YCRDS 127


>sp|GATD_METTH|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Methanothermobacter thermautotrophicus

Query: 1 QSGVIYCRD 9
Q+GVI C D
Sbjct: 381 QAGVIPCDD 389


>sp|ATGT_SULAC|TRNA-GUANINE(15) transglycosylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 VIYCRDS 10
V+YC DS
Sbjct: 397 VLYCSDS 403


>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 QSGVIYCRD 9
+ GVI CR+
Sbjct: 232 RGGVIMCRE 240


>sp|GLYA_METST|SERINE hydroxymethyltransferase|Methanosphaera stadtmanae (strain ATCC

Query: 1 QSGVIYCRD 9
Q G+I C++
Sbjct: 232 QGGIILCKE 240


>sp|GLYA_METAR|SERINE hydroxymethyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 1 QSGVIYCRD 9
Q G+I C++
Sbjct: 231 QGGIILCKE 239




4|Sequence|16|25|YCRDSDESSS

>sp|MTM2_METJA|TYPE II methyltransferase M.MjaII|Methanocaldococcus jannaschii (strain

Query: 1 YCRDSDE 7
YC++ DE
Sbjct: 255 YCKNDDE 261




5|Sequence|21|30|DESSSPRQTT

>sp|RL3_HALWD|LARGE ribosomal subunit protein uL3|Haloquadratum walsbyi (strain DSM

Query: 1 DESSSPRQ 8
DE++SPR+
Sbjct: 57 DEANSPRE 64




6|Sequence|26|35|PRQTTSVSQG

>sp|PANB_NITMS|3-METHYL-2-OXOBUTANOATE hydroxymethyltransferase|Nitrosopumilus maritimus (strain SCM1)

Query: 3 QTTSVSQG 10
QTT +SQG
Sbjct: 142 QTTMLSQG 149




7|Sequence|31|40|SVSQGPAAPL

>sp|FILR1_METH6|METHANOGENESIS regulatory protein FilR1|Methanothrix harundinacea (strain 6Ac)

Query: 2 VSQGPAAPL 10
VS PA+PL
Sbjct: 122 VSTNPASPL 130




8|Sequence|36|45|PAAPLPGLFV

>sp|COXX_PYRIL|PROTOHEME IX farnesyltransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 PLPGLFV 10
PLPGLFV
Sbjct: 104 PLPGLFV 110


>sp|COXX_PYRNV|PROTOHEME IX farnesyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 PLPGLFV 10
PLPG+FV
Sbjct: 104 PLPGVFV 110


>sp|TRUD_METKA|PROBABLE tRNA pseudouridine synthase D|Methanopyrus kandleri (strain AV19 /

Query: 1 PAAPLPGL 8
P PLPG
Sbjct: 304 PTVPLPGF 311


>sp|PDXT_THEKO|PYRIDOXAL 5'-phosphate synthase subunit PdxT|Thermococcus kodakarensis

Query: 4 PLPGLFV 10
P PG+F+
Sbjct: 136 PFPGVFI 142




9|Sequence|41|50|PGLFVQTDAA

>sp|ARLMC_PYRFU|23S rRNA (uracil(747)-C(5))-methyltransferase|Pyrococcus furiosus

Query: 1 PGLFVQTDA 9
PG+F QT++
Sbjct: 246 PGIFFQTNS 254


>sp|RSMA_THEON|PROBABLE ribosomal RNA small subunit|Thermococcus onnurineus (strain NA1)

Query: 1 PGLFVQTDA 9
PGL V TDA
Sbjct: 51 PGLGVLTDA 59




10|Sequence|46|55|QTDAADAIPP

>sp|PIMT_PYRAE|PROTEIN-L-ISOASPARTATE O-methyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 TDAADAIPP 10
T AAD IPP
Sbjct: 149 TAAADVIPP 157


>sp|Y3016_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 QTDAADAIPP 10
+ DAA IPP
Sbjct: 543 ELDAAGLIPP 552


>sp|SYP_METBF|PROLINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TDAADAIPP 10
TDA DAI P
Sbjct: 215 TDALDAIMP 223




11|Sequence|51|60|DAIPPSRASG

>sp|HEM1_METTH|GLUTAMYL-TRNA reductase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DAIPPSRASG 10
DAIPP R S
Sbjct: 246 DAIPPERRSA 255


>sp|HEM1_METTM|GLUTAMYL-TRNA reductase|Methanothermobacter marburgensis (strain ATCC BAA-927

Query: 1 DAIPPSRAS 9
DA+PP R S
Sbjct: 243 DAVPPERRS 251


>sp|IF6_STAMF|TRANSLATION initiation factor 6|Staphylothermus marinus (strain ATCC 43588

Query: 3 IPPSRASG 10
+PPS +SG
Sbjct: 27 VPPSLSSG 34




12|Sequence|56|65|SRASGPPSVA

>sp|LHRC_METTH|ATP-DEPENDENT helicase Lhr-Core|Methanothermobacter thermautotrophicus (strain

Query: 3 ASGPPSV 9
ASGPP++
Sbjct: 566 ASGPPTI 572




13|Sequence|61|70|PPSVARVRRA

>sp|NADM_PICTO|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 PPSVARV 7
PP+VARV
Sbjct: 145 PPAVARV 151


>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 SVARVRRA 10
S+ARVRRA
Sbjct: 138 SLARVRRA 145


>sp|HTPX_THEKO|PROTEASE HtpX homolog|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 PPSVARVRR 9
PP+ AR+ R
Sbjct: 270 PPTEARIER 278




14|Sequence|66|75|RVRRARTELG

>sp|SYV_METBF|VALINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 2 VRRARTELG 10
VRR ++ELG
Sbjct: 733 VRRYKSELG 741


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 2 VRRARTELG 10
VRRA +ELG
Sbjct: 384 VRRAASELG 392


>sp|RS24_PYRAE|SMALL ribosomal subunit protein eS24|Pyrobaculum aerophilum (strain

Query: 2 VRRARTELG 10
VRR +TE G
Sbjct: 56 VRRIKTEFG 64


>sp|VAT_THEAC|VCP-LIKE ATPase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 RVRRARTELG 10
+VR+ RTE+
Sbjct: 86 KVRKVRTEIA 95




15|Sequence|71|80|RTELGSGSSA

>sp|SRP54_METBU|SIGNAL recognition particle 54 kDa|Methanococcoides burtonii (strain DSM

Query: 1 RTELGSGSS 9
R LGSGSS
Sbjct: 394 RISLGSGSS 402




16|Sequence|76|85|SGSSAGSAAP

***** No hits found ******


17|Sequence|81|90|GSAAPAATTS

>sp|TREH1_SULAC|TREHALASE 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GSAAPAATTS 10
GS+ AATTS
Sbjct: 218 GSSIAAATTS 227


>sp|ILVD_SULAC|DIHYDROXY-ACID dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 218 GSASPTATSS 227


>sp|ILVD_SACI6|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.4 /

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226


>sp|ILVD_SACI4|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.14.25 /

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226


>sp|ILVD_SACI3|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226


>sp|ILVD_SACS2|DIHYDROXY-ACID dehydratase|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226


>sp|ILVD_SACI7|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.G.57.14 /

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226


>sp|ILVD_SACI2|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226


>sp|ILVD_SACI1|DIHYDROXY-ACID dehydratase|Saccharolobus islandicus (strain Y.N.15.51 /

Query: 1 GSAAPAATTS 10
GSA+P AT+S
Sbjct: 217 GSASPTATSS 226




18|Sequence|86|95|AATTSRGRRR

>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 3 TTSRGRRR 10
T SRGRRR
Sbjct: 427 TLSRGRRR 434




19|Sequence|91|100|RGRRRHCCSS

>sp|ASPD_METAR|L-ASPARTATE dehydrogenase|Methanocella arvoryzae (strain DSM 22066

Query: 4 RRHCCS 9
+ HCCS
Sbjct: 111 KEHCCS 116


>sp|RPO10_HALWD|DNA-DIRECTED RNA polymerase subunit Rpo10|Haloquadratum walsbyi (strain DSM

Query: 2 GRRRHCC 8
G +RHCC
Sbjct: 40 GIKRHCC 46




20|Sequence|96|105|HCCSSAEAET

***** No hits found ******


21|Sequence|101|110|AEAETQTCYT

>sp|Y360_METJA|UNCHARACTERIZED protein MJ0360|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AEAETQTC 8
A AET+TC
Sbjct: 36 ASAETETC 43




22|Sequence|106|115|QTCYTSVKQV

>sp|MTAP_CENSY|S-METHYL-5'-THIOADENOSINE phosphorylase|Cenarchaeum symbiosum (strain A)

Query: 1 QTCYTSVKQV 10
Q CY SV V
Sbjct: 176 QMCYASVSTV 185


>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 TCYTSVKQV 10
TC TS+ Q+
Sbjct: 172 TCKTSISQI 180


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 TCYTSVKQV 10
TC TS+ Q+
Sbjct: 172 TCKTSISQI 180


>sp|GSA_METVS|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus vannielii (strain ATCC 35089

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 400 ECCFTSIKH 408


>sp|GSA_METMP|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain DSM 14266

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 400 ECCFTSIKH 408


>sp|GSA_METM7|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C7 /

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 400 ECCFTSIKH 408


>sp|GSA_METM6|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C6 /

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 400 ECCFTSIKH 408


>sp|GSA_METM5|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus maripaludis (strain C5 /

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 400 ECCFTSIKH 408


>sp|GSA_METJA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 398 ECCFTSIKH 406


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 QTCYTSVKQ 9
+ C+TS+K
Sbjct: 403 ECCFTSIKH 411


>sp|MTAP_NITMS|S-METHYL-5'-THIOADENOSINE phosphorylase|Nitrosopumilus maritimus (strain SCM1)

Query: 1 QTCYTSVKQV 10
Q CY S+ V
Sbjct: 199 QICYASISTV 208




23|Sequence|111|120|SVKQVSSAEV

***** No hits found ******


24|Sequence|116|125|SSAEVRIGPM

>sp|RFCL_METTH|REPLICATION factor C large subunit|Methanothermobacter thermautotrophicus

Query: 3 AEVRIGPM 10
AE+++GP+
Sbjct: 413 AEIKVGPL 420


>sp|MPTN_METMA|TETRAHYDROMETHANOPTERIN:ALPHA-L-GLUTAMATE ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 SSAEVRIG 8
S AEVRIG
Sbjct: 36 SDAEVRIG 43




25|Sequence|121|130|RIGPMRLTQD

>sp|DABA_HALWD|PROBABLE inorganic carbon transporter subunit|Haloquadratum walsbyi (strain

Query: 2 IGPMRLTQD 10
IGP RLT D
Sbjct: 745 IGPRRLTDD 753


>sp|DABA_HALMA|PROBABLE inorganic carbon transporter subunit|Haloarcula marismortui (strain

Query: 2 IGPMRLTQD 10
IGP LT D
Sbjct: 621 IGPRELTSD 629




26|Sequence|126|135|RLTQDPIQVL

>sp|RS7_THEKO|SMALL ribosomal subunit protein uS7|Thermococcus kodakarensis (strain

Query: 1 RLTQDPIQVL 10
R Q+PIQVL
Sbjct: 114 RTKQNPIQVL 123


>sp|RS7_THECE|SMALL ribosomal subunit protein uS7|Thermococcus celer

Query: 1 RLTQDPIQVL 10
R Q+PIQVL
Sbjct: 114 RTKQNPIQVL 123


>sp|RS7_THEGJ|SMALL ribosomal subunit protein uS7|Thermococcus gammatolerans (strain

Query: 1 RLTQDPIQVL 10
R Q+PIQVL
Sbjct: 114 RTKQNPIQVL 123


>sp|RS7_METJA|SMALL ribosomal subunit protein uS7|Methanocaldococcus jannaschii

Query: 1 RLTQDPIQVL 10
R Q+PIQVL
Sbjct: 89 RTKQNPIQVL 98


>sp|G1PDH_METHJ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Methanospirillum hungatei JF-1 (strain

Query: 2 LTQDPIQVL 10
++ DP+QVL
Sbjct: 1 MSTDPVQVL 9


>sp|RS7_METAC|SMALL ribosomal subunit protein uS7|Methanosarcina acetivorans (strain

Query: 1 RLTQDPIQVL 10
+ Q+PIQVL
Sbjct: 88 KTKQNPIQVL 97


>sp|RS7_METBF|SMALL ribosomal subunit protein uS7|Methanosarcina barkeri (strain

Query: 1 RLTQDPIQVL 10
+ Q+PIQVL
Sbjct: 84 KTKQNPIQVL 93


>sp|RS7_SULTO|SMALL ribosomal subunit protein uS7|Sulfurisphaera tokodaii (strain DSM

Query: 4 QDPIQVL 10
Q+PIQVL
Sbjct: 96 QNPIQVL 102


>sp|RS7_SULAC|SMALL ribosomal subunit protein uS7|Sulfolobus acidocaldarius (strain

Query: 4 QDPIQVL 10
Q+PIQVL
Sbjct: 97 QNPIQVL 103


>sp|RS7_SACS2|SMALL ribosomal subunit protein uS7|Saccharolobus solfataricus (strain

Query: 4 QDPIQVL 10
Q+PIQVL
Sbjct: 95 QNPIQVL 101


>sp|RS7_HALSA|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 1 RLTQDPIQVL 10
R ++PIQVL
Sbjct: 109 RTDENPIQVL 118


>sp|RS7_HALS3|SMALL ribosomal subunit protein uS7|Halobacterium salinarum (strain ATCC

Query: 1 RLTQDPIQVL 10
R ++PIQVL
Sbjct: 109 RTDENPIQVL 118


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 4 QDPIQVL 10
Q+PIQVL
Sbjct: 126 QNPIQVL 132


>sp|TFE_THEPD|TRANSCRIPTION factor E|Thermofilum pendens (strain DSM 2475

Query: 1 RLTQDPIQ 8
R+T +PIQ
Sbjct: 79 RITDEPIQ 86


>sp|RS7_HALMA|SMALL ribosomal subunit protein uS7|Haloarcula marismortui (strain ATCC

Query: 1 RLTQDPIQVL 10
R ++PIQVL
Sbjct: 105 RTDENPIQVL 114




27|Sequence|131|140|PIQVLLIFAK

***** No hits found ******


28|Sequence|136|145|LIFAKEDSQS

>sp|FBPAP_SULTO|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 IFAKEDSQ 9
I+AKE+SQ
Sbjct: 374 IYAKEESQ 381




29|Sequence|141|150|EDSQSDGFWW

>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 EDSQSDGFW 9
ED+ DG W
Sbjct: 1029 EDANGDGIW 1037


>sp|CMR2_SACS2|CRISPR system CMR subunit Cmr2|Saccharolobus solfataricus (strain ATCC

Query: 1 EDSQSDGFW 9
E + DGFW
Sbjct: 361 ELKREDGFW 369


>sp|SDO1_METTH|RIBOSOME maturation protein SDO1 homolog|Methanothermobacter

Query: 1 EDSQSDGFW 9
E+ Q+DG W
Sbjct: 192 EEWQNDGSW 200


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 6 DGFWW 10
DG+WW
Sbjct: 523 DGYWW 527


>sp|VHTA_METMA|F420 non-reducing hydrogenase II large|Methanosarcina mazei (strain ATCC

Query: 1 EDSQSDGFW 9
+DSQ G W
Sbjct: 484 KDSQGMGLW 492


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 DSQSDGFWW 10
DS+ D WW
Sbjct: 382 DSRWDWAWW 390


>sp|VHOA_METMA|F420 non-reducing hydrogenase I large|Methanosarcina mazei (strain ATCC

Query: 1 EDSQSDGFW 9
+DSQ G W
Sbjct: 484 KDSQGMGLW 492




30|Sequence|146|155|DGFWWACDRA

>sp|GLCDH_METS5|GLUCOSE 1-dehydrogenase|Metallosphaera sedula (strain ATCC 51363

Query: 4 WWACD 8
WW CD
Sbjct: 169 WWRCD 173


>sp|URE3_NATPD|UREASE subunit gamma|Natronomonas pharaonis (strain ATCC 35678

Query: 5 WACDRA 10
WAC+RA
Sbjct: 42 WACERA 47


>sp|PGP_NATPD|PHOSPHOGLYCOLATE phosphatase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DGFWWACDRA 10
DGF A DRA
Sbjct: 213 DGFLEALDRA 222


>sp|DAPF_METKA|DIAMINOPIMELATE epimerase|Methanopyrus kandleri (strain AV19 /

Query: 5 WACDR 9
WACDR
Sbjct: 35 WACDR 39


>sp|KVAP_AERPE|VOLTAGE-GATED potassium channel|Aeropyrum pernix (strain ATCC 700893

Query: 1 DGFWWA 6
D WWA
Sbjct: 198 DALWWA 203


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 4 WWACDRA 10
WW C R+
Sbjct: 201 WWLCHRS 207


>sp|ACSA_METTP|ACETYL-COENZYME A synthetase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 DGFWW 5
DG+WW
Sbjct: 523 DGYWW 527


>sp|SYR_METMA|ARGININE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 WACDR 9
WAC+R
Sbjct: 172 WACER 176


>sp|SYR_METBF|ARGININE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 5 WACDR 9
WAC+R
Sbjct: 172 WACER 176


>sp|SYR_METAC|ARGININE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 WACDR 9
WAC+R
Sbjct: 170 WACER 174


>sp|URE3_HALWD|UREASE subunit gamma|Haloquadratum walsbyi (strain DSM 16790

Query: 5 WACDRA 10
W C+RA
Sbjct: 42 WVCERA 47


>sp|CCA_ARCFU|CCA-ADDING enzyme|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGFWWA 6
+G WWA
Sbjct: 371 NGRWWA 376


>sp|Y510_ARCFU|UNCHARACTERIZED transporter AF_0510|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DGFWWA 6
DGF WA
Sbjct: 157 DGFLWA 162




31|Sequence|151|160|ACDRAGYRCN

>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 1 ACDRAGYRCN 10
A + GYRCN
Sbjct: 139 ALSKMGYRCN 148


>sp|PURT_IGNH4|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Ignicoccus hospitalis

Query: 1 ACDRAGYRC 9
AC++ GY C
Sbjct: 145 ACEKVGYPC 153


>sp|PURT_THEKO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Thermococcus

Query: 1 ACDRAGYRCN 10
AC++ GY C+
Sbjct: 148 ACEKIGYPCH 157


>sp|PURT_PYRHO|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus horikoshii

Query: 1 ACDRAGYRCN 10
AC++ GY C+
Sbjct: 148 ACEKIGYPCH 157


>sp|PURT_PYRFU|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus furiosus

Query: 1 ACDRAGYRCN 10
AC++ GY C+
Sbjct: 148 ACEKIGYPCH 157


>sp|PURT_PYRAB|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Pyrococcus abyssi

Query: 1 ACDRAGYRCN 10
AC++ GY C+
Sbjct: 148 ACEKIGYPCH 157


>sp|Y1223_PYRHO|UNCHARACTERIZED ZPR1-like protein PH1223|Pyrococcus horikoshii (strain ATCC

Query: 2 CDRAGYR 8
C+R GYR
Sbjct: 64 CERCGYR 70


>sp|LONH_THEVO|PUTATIVE lon protease homolog|Thermoplasma volcanium (strain ATCC 51530

Query: 3 DRAGYRCN 10
+R GYRC+
Sbjct: 124 ERLGYRCS 131


>sp|LONH_THEAC|PUTATIVE lon protease homolog|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 DRAGYRCN 10
+R GYRC+
Sbjct: 124 ERLGYRCS 131


>sp|TRM1_METS5|TRNA (guanine(26)-N(2))-dimethyltransferase|Metallosphaera sedula

Query: 2 CDRAGY 7
CDR GY
Sbjct: 244 CDRCGY 249


>sp|TIAS_THEGJ|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermococcus gammatolerans

Query: 2 CDRAGYR 8
C R GYR
Sbjct: 372 CKRCGYR 378


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 5 AGYRCN 10
+GY+CN
Sbjct: 453 SGYKCN 458


>sp|RL5_METM5|LARGE ribosomal subunit protein uL5|Methanococcus maripaludis (strain C5

Query: 3 DRAGYR 8
D+AGYR
Sbjct: 139 DKAGYR 144


>sp|HYPA_META3|HYDROGENASE maturation factor HypA|Methanococcus aeolicus (strain ATCC

Query: 1 ACDRAGYR 8
AC+ GYR
Sbjct: 76 ACNNCGYR 83


>sp|Y1242_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 CDRAG 6
CDRAG
Sbjct: 503 CDRAG 507


>sp|FOLD_METTP|BIFUNCTIONAL protein FolD|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ACDRAGYR 8
AC+R G R
Sbjct: 50 ACERVGIR 57


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ACDRAGYR 8
AC+R G R
Sbjct: 62 ACERVGIR 69


>sp|ACDA_METBU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanococcoides

Query: 1 ACDRAGYRC 9
AC R Y C
Sbjct: 453 ACGRCEYAC 461


>sp|TIAS_IGNAA|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Ignisphaera aggregans (strain

Query: 2 CDRAGY 7
CD+ GY
Sbjct: 395 CDKCGY 400




32|Sequence|156|165|GYRCNIARTP

>sp|RTCA_METBU|RNA 3'-terminal phosphate cyclase|Methanococcoides burtonii (strain DSM

Query: 1 GYRCNI 6
GYRCNI
Sbjct: 144 GYRCNI 149


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 YRCNIARTP 10
Y+C + RTP
Sbjct: 143 YKCPLDRTP 151


>sp|APGM_METMJ|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanoculleus marisnigri (strain ATCC

Query: 1 GYRCNIA 7
G+RCN A
Sbjct: 96 GFRCNFA 102


>sp|RL10_SACI7|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 GYRCNIA 7
GYR NIA
Sbjct: 215 GYRSNIA 221


>sp|RL10_SACI6|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 GYRCNIA 7
GYR NIA
Sbjct: 215 GYRSNIA 221


>sp|RL10_SACI4|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 GYRCNIA 7
GYR NIA
Sbjct: 215 GYRSNIA 221


>sp|RL10_SACI3|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 GYRCNIA 7
GYR NIA
Sbjct: 215 GYRSNIA 221


>sp|RL10_SACI2|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 GYRCNIA 7
GYR NIA
Sbjct: 215 GYRSNIA 221


>sp|RL10_SACI1|LARGE ribosomal subunit protein uL10|Saccharolobus islandicus (strain

Query: 1 GYRCNIA 7
GYR NIA
Sbjct: 215 GYRSNIA 221


>sp|APGM_METTP|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Methanothrix thermoacetophila (strain DSM

Query: 3 RCNIART 9
RC +ART
Sbjct: 41 RCGLART 47


>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 1 GYRCN 5
GY+CN
Sbjct: 454 GYKCN 458


>sp|NFI_METKA|ENDONUCLEASE V|Methanopyrus kandleri (strain AV19 /

Query: 1 GYRCNI 6
G+RCN+
Sbjct: 179 GHRCNL 184




33|Sequence|161|170|IARTPESALE

>sp|HDRB1_METMP|H(2)/FORMATE:COB-COM heterodisulfide,ferredoxin reductase subunit B1|Methanococcus

Query: 2 ARTPESALE 10
AR PE ALE
Sbjct: 207 ARNPEVALE 215


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 2 ARTPESALE 10
A+TPE A+E
Sbjct: 147 AKTPEEAIE 155


>sp|SUCC_IGNH4|SUCCINATE--COA ligase [ADP-forming] subunit beta|Ignicoccus hospitalis (strain

Query: 1 IARTPESALE 10
+AR P+ ALE
Sbjct: 61 LARDPDEALE 70


>sp|SUCC_PYRAR|SUCCINATE--COA ligase [ADP-forming] subunit beta|Pyrobaculum arsenaticum (strain

Query: 1 IARTPESALE 10
+A+TPE A E
Sbjct: 61 VAKTPEEAYE 70


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 ARTPESALE 10
A PESALE
Sbjct: 8372 APVPESALE 8380


>sp|KPTA_HYPBU|PROBABLE RNA 2'-phosphotransferase|Hyperthermus butylicus (strain DSM 5456

Query: 1 IARTPESA 8
IAR P+SA
Sbjct: 219 IARNPQSA 226


>sp|SUCC_STAMF|SUCCINATE--COA ligase [ADP-forming] subunit beta|Staphylothermus marinus (strain

Query: 1 IARTPESA 8
IA+TPE A
Sbjct: 24 IAKTPEEA 31


>sp|RPO11_PYRHO|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrococcus horikoshii (strain ATCC

Query: 4 TPESALE 10
TPE ALE
Sbjct: 66 TPEKALE 72




34|Sequence|166|175|ESALECFLDK

>sp|SPSS_METTH|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 ALECFLD 9
A+ CFLD
Sbjct: 60 AINCFLD 66


>sp|Y1060_METJA|UNCHARACTERIZED protein MJ1060|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 LECFLD 9
LEC+LD
Sbjct: 31 LECYLD 36


>sp|MTRH_METTH|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit H|Methanothermobacter

Query: 1 ESALECFLDK 10
E A EC +DK
Sbjct: 182 EMAAECGIDK 191


>sp|Y798_METJA|TPR repeat-containing protein MJ0798|Methanocaldococcus jannaschii

Query: 1 ESALECF 7
E A+ECF
Sbjct: 290 EKAIECF 296




35|Sequence|171|180|CFLDKHHEII

>sp|RS12_SACS2|SMALL ribosomal subunit protein uS12|Saccharolobus solfataricus (strain

Query: 2 FLDKHHEII 10
F+D+H E+I
Sbjct: 96 FIDEHDEVI 104


>sp|RS12_PYRHO|SMALL ribosomal subunit protein uS12|Pyrococcus horikoshii (strain ATCC

Query: 2 FLDKHHEII 10
F+D+H E+I
Sbjct: 96 FIDEHDEVI 104


>sp|RS12_PYRFU|SMALL ribosomal subunit protein uS12|Pyrococcus furiosus (strain ATCC

Query: 2 FLDKHHEII 10
F+D+H E+I
Sbjct: 96 FIDEHDEVI 104


>sp|RS12_PYRAB|SMALL ribosomal subunit protein uS12|Pyrococcus abyssi (strain GE5 /

Query: 2 FLDKHHEII 10
F+D+H E+I
Sbjct: 96 FIDEHDEVI 104


>sp|RS12_METJA|SMALL ribosomal subunit protein uS12|Methanocaldococcus jannaschii

Query: 2 FLDKHHEII 10
F+D+H E+I
Sbjct: 96 FIDEHDEVI 104


>sp|RS12_ARCFU|SMALL ribosomal subunit protein uS12|Archaeoglobus fulgidus (strain

Query: 2 FLDKHHEII 10
F+D+H E+I
Sbjct: 91 FIDEHDEVI 99


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 2 FLDKHHEII 10
FLD H EI+
Sbjct: 201 FLDHHPEIV 209


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 2 FLDKHHEII 10
FLD++ EII
Sbjct: 282 FLDRYSEII 290


>sp|RS12_SULTO|SMALL ribosomal subunit protein uS12|Sulfurisphaera tokodaii (strain DSM

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RS12_SULAC|SMALL ribosomal subunit protein uS12|Sulfolobus acidocaldarius (strain

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RS12_METVS|SMALL ribosomal subunit protein uS12|Methanococcus vannielii (strain ATCC

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RS12_METTP|SMALL ribosomal subunit protein uS12|Methanothrix thermoacetophila

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 91 FIDEHDEVV 99


>sp|RS12_METTH|SMALL ribosomal subunit protein uS12|Methanothermobacter

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 90 FIDEHDEVV 98


>sp|RS12_METMP|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RS12_METM7|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C7

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RS12_METM5|SMALL ribosomal subunit protein uS12|Methanococcus maripaludis (strain C5

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RS12_META3|SMALL ribosomal subunit protein uS12|Methanococcus aeolicus (strain ATCC

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 96 FIDEHDEVV 104


>sp|RF1_HALLT|PEPTIDE chain release factor subunit|Halorubrum lacusprofundi (strain ATCC

Query: 2 FLDKHHEI 9
F+DK HE+
Sbjct: 215 FVDKRHEL 222


>sp|Y1285_SULAC|UPF0201 protein Saci_1285|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 FLDKHHE 8
F+DK HE
Sbjct: 98 FIDKEHE 104


>sp|KAD_METBU|ADENYLATE kinase|Methanococcoides burtonii (strain DSM 6242

Query: 3 LDKHHEI 9
LDKH++I
Sbjct: 20 LDKHYQI 26


>sp|RS12_METST|SMALL ribosomal subunit protein uS12|Methanosphaera stadtmanae (strain

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 90 FIDEHDEVM 98


>sp|RS12_METS3|SMALL ribosomal subunit protein uS12|Methanobrevibacter smithii (strain

Query: 2 FLDKHHEII 10
F+D+H E++
Sbjct: 90 FIDEHDEVM 98


>sp|RS12_STAMF|SMALL ribosomal subunit protein uS12|Staphylothermus marinus (strain ATCC

Query: 2 FLDKHHEII 10
++D+H E+I
Sbjct: 96 YIDEHDEVI 104


>sp|TRM56_METB6|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanoregula boonei (strain

Query: 2 FLDKHHE 8
FLD++H+
Sbjct: 143 FLDRYHD 149


>sp|3MGH_METAR|PUTATIVE 3-methyladenine DNA glycosylase|Methanocella arvoryzae (strain DSM

Query: 5 KHHEI 9
KHHEI
Sbjct: 120 KHHEI 124


>sp|FAU1_HYPBU|PROBABLE ribonuclease FAU-1|Hyperthermus butylicus (strain DSM 5456

Query: 3 LDKHHE 8
LDK+HE
Sbjct: 447 LDKYHE 452


>sp|RS12_AERPE|SMALL ribosomal subunit protein uS12|Aeropyrum pernix (strain ATCC 700893

Query: 2 FLDKHHEII 10
++D+H E+I
Sbjct: 96 YVDEHDEVI 104


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 2 FLDKHHEII 10
FLDK +EI+
Sbjct: 167 FLDKVYEIM 175


>sp|RS12_NATPD|SMALL ribosomal subunit protein uS12|Natronomonas pharaonis (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METMJ|SMALL ribosomal subunit protein uS12|Methanoculleus marisnigri (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METMA|SMALL ribosomal subunit protein uS12|Methanosarcina mazei (strain ATCC

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METLZ|SMALL ribosomal subunit protein uS12|Methanocorpusculum labreanum

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METHJ|SMALL ribosomal subunit protein uS12|Methanospirillum hungatei JF-1

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METBU|SMALL ribosomal subunit protein uS12|Methanococcoides burtonii (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METBF|SMALL ribosomal subunit protein uS12|Methanosarcina barkeri (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METB6|SMALL ribosomal subunit protein uS12|Methanoregula boonei (strain DSM

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METAR|SMALL ribosomal subunit protein uS12|Methanocella arvoryzae (strain DSM

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_METAC|SMALL ribosomal subunit protein uS12|Methanosarcina acetivorans (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_HALWD|SMALL ribosomal subunit protein uS12|Haloquadratum walsbyi (strain DSM

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_HALSA|SMALL ribosomal subunit protein uS12|Halobacterium salinarum (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_HALS3|SMALL ribosomal subunit protein uS12|Halobacterium salinarum (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_HALMO|SMALL ribosomal subunit protein uS12|Halococcus morrhuae (Micrococcus

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_HALMA|SMALL ribosomal subunit protein uS12|Haloarcula marismortui (strain

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 91 FIDEHDEV 98


>sp|RS12_CENSY|SMALL ribosomal subunit protein uS12|Cenarchaeum symbiosum (strain A)

Query: 2 FLDKHHEI 9
F+D+H E+
Sbjct: 94 FIDEHDEV 101


>sp|RS12_PICTO|SMALL ribosomal subunit protein uS12|Picrophilus torridus (strain ATCC

Query: 2 FLDKHHEII 10
++D+H E++
Sbjct: 91 YIDEHDEVV 99


>sp|RS12_METKA|SMALL ribosomal subunit protein uS12|Methanopyrus kandleri (strain AV19 /

Query: 2 FLDKHHEII 10
++D+H E++
Sbjct: 96 YIDEHDEVV 104


>sp|NCSA_HALVD|TRNA 2-thiolation protein NcsA|Haloferax volcanii (strain ATCC 29605

Query: 3 LDKHHEII 10
LD HHE++
Sbjct: 112 LDIHHELV 119


>sp|METXA_METST|HOMOSERINE O-acetyltransferase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 3 LDKHHEII 10
+DK+H++I
Sbjct: 469 IDKNHKVI 476


>sp|RIBL_HALMD|FAD synthase|Halomicrobium mukohataei (strain ATCC 700874

Query: 4 DKHHEI 9
D+HHE+
Sbjct: 94 DQHHEV 99




36|Sequence|176|185|HHEIIVIDHR

>sp|RL15E_HALWD|LARGE ribosomal subunit protein eL15|Haloquadratum walsbyi (strain DSM

Query: 2 HEIIVID 8
HEII+ID
Sbjct: 130 HEIILID 136


>sp|RL15E_HALMA|LARGE ribosomal subunit protein eL15|Haloarcula marismortui (strain ATCC

Query: 2 HEIIVID 8
HE+I+ID
Sbjct: 130 HEVILID 136


>sp|PPAC_METJA|MANGANESE-DEPENDENT inorganic pyrophosphatase|Methanocaldococcus jannaschii (strain

Query: 3 EIIVIDH 9
EII++DH
Sbjct: 61 EIILVDH 67


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 2 HEIIVIDH 9
HE++ +DH
Sbjct: 324 HELVDVDH 331


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 2 HEIIVIDH 9
HE++ +DH
Sbjct: 324 HELVDVDH 331


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 HEIIVIDH 9
HE++ +DH
Sbjct: 324 HELVDVDH 331


>sp|RADA_AERPE|DNA repair and recombination protein|Aeropyrum pernix (strain ATCC

Query: 1 HHEIIVID 8
HH+I ++D
Sbjct: 182 HHQIAIVD 189


>sp|RADA_AERPX|DNA repair and recombination protein|Aeropyrum pernix

Query: 1 HHEIIVID 8
HH+I ++D
Sbjct: 182 HHQIAIVD 189


>sp|Y1198_METJA|PROTEIN MJ1198|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EIIVIDH 9
E+IVIDH
Sbjct: 464 EVIVIDH 470


>sp|Y719_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 2 HEIIVIDH 9
H++IV+D+
Sbjct: 277 HDLIVLDY 284




37|Sequence|181|190|VIDHRQTQNF

>sp|Y1441_METJA|UNCHARACTERIZED protein MJ1441|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VIDHRQT 7
+IDH QT
Sbjct: 582 IIDHMQT 588




38|Sequence|186|195|QTQNFDAEAV

>sp|Y153_THEVO|UPF0284 protein TV0153|Thermoplasma volcanium (strain ATCC 51530

Query: 4 NFDAEAV 10
NF+AEA+
Sbjct: 320 NFEAEAI 326


>sp|SPH3_HALVD|SMC-LIKE protein Sph3|Haloferax volcanii (strain ATCC 29605

Query: 4 NFDAEAV 10
+FDAEAV
Sbjct: 255 SFDAEAV 261




39|Sequence|191|200|DAEAVCRSIR

>sp|COFD_NATPD|2-PHOSPHO-L-LACTATE transferase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 DAEAVCRSIR 10
D E VCR++R
Sbjct: 314 DGERVCRAVR 323


>sp|MCH_META3|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DAEAVCRSI 9
D EA+C+++
Sbjct: 249 DVEALCKAL 257


>sp|Y1297_ARCFU|CELL division cycle protein 48|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DAEAVCR 7
D EAVCR
Sbjct: 662 DIEAVCR 668


>sp|IDI2_ARCFU|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 EAVCRSIR 10
E VCRS++
Sbjct: 175 EEVCRSVK 182


>sp|DCDB_METMJ|DCTP deaminase, dUMP-forming|Methanoculleus marisnigri (strain ATCC

Query: 1 DAEAVCR 7
D+E VCR
Sbjct: 54 DSETVCR 60




40|Sequence|196|205|CRSIRATNPS

>sp|ISF1_METJA|IRON-SULFUR flavoprotein MJ0731|Methanocaldococcus jannaschii (strain ATCC

Query: 1 CRSIRATNP 9
CR+I A NP
Sbjct: 100 CRAILAKNP 108


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 4 IRATNP 9
IRATNP
Sbjct: 909 IRATNP 914


>sp|FTHS_METLZ|FORMATE--TETRAHYDROFOLATE ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 CRSIRATNPS 10
C S+RAT S
Sbjct: 284 CNSVRATKLS 293




41|Sequence|201|210|ATNPSEHTVI

>sp|PYRG_METBF|CTP synthase|Methanosarcina barkeri (strain Fusaro /

Query: 2 TNPSEHTV 9
T PS+H+V
Sbjct: 187 TKPSQHSV 194


>sp|PYRG_METAC|CTP synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 TNPSEHTV 9
T PS+H+V
Sbjct: 187 TKPSQHSV 194


>sp|Y3411_METJA|UPF0304 protein MJECS11|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPSEHTVI 10
NP++H +I
Sbjct: 78 NPNDHEII 85


>sp|NDK_METPE|NUCLEOSIDE diphosphate kinase|Methanosphaerula palustris (strain ATCC

Query: 1 ATNPSE 6
ATNPSE
Sbjct: 90 ATNPSE 95


>sp|PRIS_HALSA|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 4 PSEHTV 9
P+EHTV
Sbjct: 351 PTEHTV 356


>sp|PRIS_HALS3|DNA primase small subunit PriS|Halobacterium salinarum (strain ATCC

Query: 4 PSEHTV 9
P+EHTV
Sbjct: 351 PTEHTV 356


>sp|Y365_METJA|UNCHARACTERIZED protein MJ0365|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NPSEHTVI 10
NP EH ++
Sbjct: 14 NPMEHRIV 21


>sp|MES_EURX9|METALLOPTERIN-DEPENDENT ergothioneine synthase|Euryarchaeota archaeon (strain ADurb.Bin009)

Query: 2 TNPSEHTVI 10
T+P+EH+ +
Sbjct: 839 TSPTEHSAV 847


>sp|METK_CALMQ|S-ADENOSYLMETHIONINE synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 3 NPSEHTVI 10
NP +H VI
Sbjct: 128 NPDQHLVI 135




42|Sequence|206|215|EHTVILAVVS

***** No hits found ******


43|Sequence|211|220|LAVVSRVSDD

>sp|ALAXM_METAC|ALANYL-TRNA editing protein AlaX-M|Methanosarcina acetivorans (strain ATCC

Query: 2 AVVSRVSDD 10
A+V +V+DD
Sbjct: 17 AIVEKVTDD 25




44|Sequence|216|225|RVSDDHEEAS

>sp|AMT2_HALMT|AMMONIUM transporter Amt2|Haloferax mediterranei (strain ATCC 33500

Query: 1 RVSDDHE 7
RVS DHE
Sbjct: 404 RVSADHE 410


>sp|KGSDH_HALVD|ALPHA-KETOGLUTARATE semialdehyde dehydrogenase|Haloferax volcanii (strain ATCC 29605

Query: 2 VSDDHEEAS 10
V+DDH EA+
Sbjct: 416 VTDDHTEAN 424


>sp|PYRH_PYRFU|URIDYLATE kinase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 RVSDDHEEA 9
+VS+DHE A
Sbjct: 31 KVSEDHEVA 39




45|Sequence|221|230|HEEASVLPLL

>sp|G3P_METMJ|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 HEEASVLP 8
H+EA V+P
Sbjct: 301 HQEADVVP 308


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 1 HEEASVLP 8
H+EA V+P
Sbjct: 298 HQEADVVP 305


>sp|Y922_METJA|UNCHARACTERIZED protein MJ0922|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 HEEASVL 7
HE+AS+L
Sbjct: 87 HEDASIL 93


>sp|G3P_METKA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 1 HEEASVLP 8
H+EA V+P
Sbjct: 308 HQEADVVP 315




46|Sequence|226|235|VLPLLHAGFN

>sp|KTHY2_SULTO|PROBABLE thymidylate kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 VLPLLHAGF 9
+LP+L +GF
Sbjct: 79 ILPMLKSGF 87


>sp|KTHY2_SACS2|PROBABLE thymidylate kinase 2|Saccharolobus solfataricus (strain ATCC

Query: 1 VLPLLHAGF 9
+LP+L +GF
Sbjct: 78 ILPMLKSGF 86


>sp|QUEE_METAC|7-CARBOXY-7-DEAZAGUANINE synthase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 PLLHAGF 9
PLLHA F
Sbjct: 97 PLLHADF 103


>sp|Y1940_AERPE|UNCHARACTERIZED protein APE_1940.1|Aeropyrum pernix (strain ATCC 700893

Query: 4 LLHAGFN 10
LLH GFN
Sbjct: 75 LLHLGFN 81


>sp|RPO1N_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Saccharolobus shibatae (strain ATCC

Query: 1 VLPLLHAGF 9
V P++H GF
Sbjct: 78 VRPVIHVGF 86


>sp|SYS_ARCFU|SERINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LPLLHAG 8
LPLL+AG
Sbjct: 268 LPLLYAG 274


>sp|RPO1N_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 PLLHAGFN 10
P++H GF+
Sbjct: 84 PVIHVGFS 91


>sp|RPO1N_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo1N|Halobacterium salinarum (strain ATCC

Query: 3 PLLHAGFN 10
P++H GF+
Sbjct: 84 PVIHVGFS 91


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 6 HAGFN 10
HAGFN
Sbjct: 779 HAGFN 783


>sp|RPO1N_THECE|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermococcus celer

Query: 3 PLLHAGF 9
P++H GF
Sbjct: 82 PVIHVGF 88


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 3 PLLHAGF 9
P++H GF
Sbjct: 82 PVIHVGF 88


>sp|RPO1N_METTH|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter

Query: 3 PLLHAGF 9
P++H GF
Sbjct: 82 PVIHVGF 88


>sp|COFE_METMA|COENZYME F420:L-glutamate ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 LPLLHAGFN 10
+PL+H G N
Sbjct: 11 IPLIHEGDN 19


>sp|KHSE_PYRAB|HOMOSERINE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 VLPLLHAGFN 10
V+P + GFN
Sbjct: 134 VIPSYYGGFN 143


>sp|CDPAS_METAR|CDP-ARCHAEOL synthase|Methanocella arvoryzae (strain DSM 22066

Query: 1 VLPLLHAGFN 10
++P+ H FN
Sbjct: 152 IIPVFHVAFN 161


>sp|ACD_METJA|ACETATE--COA ligase [ADP-forming]|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VLPLLHAGFN 10
+ PLL+ GF+
Sbjct: 172 IAPLLNIGFS 181


>sp|P152_METTH|PROTEIN MTH_152|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 VLPLLHAGFN 10
V P+LH G N
Sbjct: 165 VKPVLHVGGN 174


>sp|CDPAS_METLZ|CDP-ARCHAEOL synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 3 PLLHAGFN 10
PLLH G N
Sbjct: 156 PLLHRGTN 163




47|Sequence|231|240|HAGFNRRFME

>sp|TMCA_SACI7|TRNA(MET) cytidine acetyltransferase TmcA|Saccharolobus islandicus (strain

Query: 4 FNRRFME 10
F RRFME
Sbjct: 158 FERRFME 164


>sp|PXPA_THESM|5-OXOPROLINASE subunit A|Thermococcus sibiricus (strain DSM 12597

Query: 3 GFNRRFME 10
GF RR+M+
Sbjct: 70 GFGRRYMD 77


>sp|PXPA_PYRHO|5-OXOPROLINASE subunit A|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 GFNRRFME 10
GF RR+M+
Sbjct: 70 GFGRRYMK 77


>sp|PXPA_THEKO|5-OXOPROLINASE subunit A|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 GFNRRFME 10
GF RR+M+
Sbjct: 70 GFGRRYMK 77


>sp|RIFK_HALSA|RIBOFLAVIN kinase|Halobacterium salinarum (strain ATCC 700922

Query: 3 GFNRRFME 10
G+NR+F E
Sbjct: 121 GYNRQFAE 128


>sp|PXPA_PYRAB|5-OXOPROLINASE subunit A|Pyrococcus abyssi (strain GE5 /

Query: 3 GFNRRFME 10
GF RR+M+
Sbjct: 70 GFGRRYMK 77


>sp|PXPA_PYRFU|5-OXOPROLINASE subunit A|Pyrococcus furiosus (strain ATCC 43587

Query: 3 GFNRRFME 10
GF RR+M+
Sbjct: 70 GFGRRYMK 77


>sp|PXPA_THEON|5-OXOPROLINASE subunit A|Thermococcus onnurineus (strain NA1)

Query: 3 GFNRRFME 10
GF RR+M+
Sbjct: 70 GFGRRYMK 77


>sp|CAS6B_SACS2|CRISPR-ASSOCIATED endoribonuclease Cas6 2|Saccharolobus solfataricus (strain ATCC

Query: 1 HAGFNRR 7
H GFN+R
Sbjct: 57 HLGFNQR 63


>sp|DTDA_CENSY|D-AMINOACYL-TRNA deacylase|Cenarchaeum symbiosum (strain A)

Query: 1 HAGFNRRFM 9
+ GF RR+M
Sbjct: 99 YPGFQRRYM 107


>sp|SYE_METS3|GLUTAMATE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 GFNRRFME 10
G NR F+E
Sbjct: 391 GLNRNFLE 398


>sp|MOBA_PYRHO|PROBABLE molybdenum cofactor guanylyltransferase|Pyrococcus horikoshii

Query: 1 HAGFNRRFME 10
HA ++R F E
Sbjct: 131 HAAYSREFRE 140




48|Sequence|236|245|RRFMENSSII

>sp|RPO3_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 RFMENSSII 10
RF+ENSS++
Sbjct: 50 RFVENSSVM 58


>sp|RPO3_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo3|Halobacterium salinarum (strain ATCC

Query: 2 RFMENSSII 10
RF+ENSS++
Sbjct: 50 RFVENSSVM 58


>sp|HELS_METMA|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 RRFMENSSII 10
+RF ENS I+
Sbjct: 13 KRFYENSGIL 22


>sp|HELS_METAC|ATP-DEPENDENT DNA helicase Hel308|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 RRFMENSSI 9
+RF ENS I
Sbjct: 13 KRFYENSGI 21


>sp|GCK_PICTO|GLYCERATE 2-kinase|Picrophilus torridus (strain ATCC 700027

Query: 2 RFMENSS 8
RFM+NSS
Sbjct: 334 RFMKNSS 340


>sp|TFE_METTH|TRANSCRIPTION factor E|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 RFMENSSII 10
FM+NS II
Sbjct: 145 EFMDNSEII 153


>sp|TFE_METTP|TRANSCRIPTION factor E|Methanothrix thermoacetophila (strain DSM 6194

Query: 3 FMENSSII 10
+MENS+I+
Sbjct: 144 YMENSTIV 151




49|Sequence|241|250|NSSIIACYNE

>sp|CARB_SACI7|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NSSIIAC 7
NSS+IAC
Sbjct: 225 NSSVIAC 231


>sp|CARB_SACI2|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NSSIIAC 7
NSS+IAC
Sbjct: 225 NSSVIAC 231


>sp|CARB_SACI1|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NSSIIAC 7
NSS+IAC
Sbjct: 225 NSSVIAC 231


>sp|CARB_SULAC|CARBAMOYL phosphate synthase large chain|Sulfolobus acidocaldarius (strain

Query: 1 NSSIIAC 7
NS++IAC
Sbjct: 225 NSAVIAC 231


>sp|CARB_SULTO|CARBAMOYL phosphate synthase large chain|Sulfurisphaera tokodaii (strain DSM

Query: 1 NSSIIAC 7
NS++IAC
Sbjct: 225 NSAVIAC 231


>sp|CARB_SACI6|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NSSIIAC 7
NS++IAC
Sbjct: 225 NSAVIAC 231


>sp|CARB_SACI4|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NSSIIAC 7
NS++IAC
Sbjct: 225 NSAVIAC 231


>sp|CARB_SACI3|CARBAMOYL phosphate synthase large chain|Saccharolobus islandicus (strain

Query: 1 NSSIIAC 7
NS++IAC
Sbjct: 225 NSAVIAC 231


>sp|CARB_SACS2|CARBAMOYL phosphate synthase large chain|Saccharolobus solfataricus (strain

Query: 1 NSSIIAC 7
NS++IAC
Sbjct: 225 NSAVIAC 231


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 IIACYN 9
++ACYN
Sbjct: 459 LLACYN 464




50|Sequence|246|255|ACYNELIQIE

>sp|AATB_SULTO|A-TYPE ATP synthase subunit B|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 28 AAYNELVEIE 37


>sp|AATB_SULAC|A-TYPE ATP synthase subunit B|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ACYNELIQIE 10
A YNELI++E
Sbjct: 29 AAYNELIEVE 38


>sp|AATB_SACS2|A-TYPE ATP synthase subunit B|Saccharolobus solfataricus (strain ATCC

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_SACI7|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.G.57.14

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_SACI6|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.4 /

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_SACI4|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.14.25 /

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_SACI3|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain M.16.27)

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_SACI2|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain L.S.2.15

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_SACI1|A-TYPE ATP synthase subunit B|Saccharolobus islandicus (strain Y.N.15.51

Query: 1 ACYNELIQIE 10
A YNEL++IE
Sbjct: 26 ASYNELVEIE 35


>sp|AATB_METST|A-TYPE ATP synthase subunit B|Methanosphaera stadtmanae (strain ATCC

Query: 1 ACYNELIQIE 10
A YNE+++IE
Sbjct: 30 AAYNEIVEIE 39


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ACYNELIQIE 10
A YNE++ IE
Sbjct: 25 AAYNEMVDIE 34


>sp|AATB_THEAC|A-TYPE ATP synthase subunit B|Thermoplasma acidophilum (strain ATCC

Query: 1 ACYNELIQIE 10
A YNE++ IE
Sbjct: 25 AAYNEMVDIE 34


>sp|AATB_METS5|A-TYPE ATP synthase subunit B|Metallosphaera sedula (strain ATCC 51363

Query: 1 ACYNELIQIE 10
+ YNEL+++E
Sbjct: 29 SAYNELVEVE 38


>sp|ENO_SULAC|ENOLASE acidocaldarius (strain ATCC 33909

Query: 3 YNELIQIE 10
YN LI+IE
Sbjct: 395 YNRLIEIE 402


>sp|Y1520_METJA|UNCHARACTERIZED protein MJ1520|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CYNELIQ 8
CYN+LI+
Sbjct: 218 CYNKLIR 224


>sp|ACAR_SULTO|ACRYLOYL-COENZYME A reductase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 CYNELIQIE 10
CY +L+Q++
Sbjct: 38 CYRDLLQLQ 46


>sp|ACAR_METS5|ACRYLOYL-COENZYME A reductase|Metallosphaera sedula (strain ATCC 51363

Query: 2 CYNELIQIE 10
CY +L+Q++
Sbjct: 38 CYRDLLQLQ 46


>sp|AATB_CENSY|A-TYPE ATP synthase subunit B|Cenarchaeum symbiosum (strain A)

Query: 1 ACYNELIQIE 10
A ++EL++IE
Sbjct: 28 AAFDELVEIE 37


>sp|ILVC_ARCFU|KETOL-ACID reductoisomerase (NAD(P)(+))|Archaeoglobus fulgidus (strain ATCC

Query: 3 YNELIQIE 10
YN+L+Q+E
Sbjct: 303 YNKLLQME 310


>sp|DHOM_METJA|HOMOSERINE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CYNELIQ 8
CY ELI+
Sbjct: 129 CYKELIE 135


>sp|ENO_SACS2|ENOLASE solfataricus (strain ATCC 35092

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|ENO_SACI7|ENOLASE islandicus (strain Y.G.57.14 /

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|ENO_SACI6|ENOLASE islandicus (strain M.16.4 /

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|ENO_SACI4|ENOLASE islandicus (strain M.14.25 /

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|ENO_SACI3|ENOLASE islandicus (strain M.16.27) (Sulfolobus

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|ENO_SACI2|ENOLASE islandicus (strain L.S.2.15 /

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|ENO_SACI1|ENOLASE islandicus (strain Y.N.15.51 /

Query: 3 YNELIQIE 10
YN+L++IE
Sbjct: 398 YNKLLEIE 405


>sp|SRP54_SULTO|SIGNAL recognition particle 54 kDa|Sulfurisphaera tokodaii (strain DSM

Query: 1 ACYNELIQI 9
A Y++L+QI
Sbjct: 137 AAYDQLVQI 145


>sp|SRP54_SULAC|SIGNAL recognition particle 54 kDa|Sulfolobus acidocaldarius (strain ATCC

Query: 1 ACYNELIQI 9
A Y +LIQI
Sbjct: 137 AAYEQLIQI 145


>sp|DNLI_METS5|DNA ligase|Metallosphaera sedula (strain ATCC 51363

Query: 3 YNELIQI 9
YNEL++I
Sbjct: 126 YNELVKI 132


>sp|ENO_SULTO|ENOLASE tokodaii (strain DSM 16993

Query: 3 YNELIQIE 10
YN L++IE
Sbjct: 395 YNRLLEIE 402


>sp|ENO_METS5|ENOLASE sedula (strain ATCC 51363

Query: 3 YNELIQIE 10
YN L++IE
Sbjct: 397 YNRLLEIE 404


>sp|ENO_AERPE|ENOLASE pernix (strain ATCC 700893

Query: 3 YNELIQIE 10
YN L++IE
Sbjct: 404 YNRLLEIE 411


>sp|CAS1A_ARCFU|CRISPR-ASSOCIATED endonuclease Cas1 1|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ACYNELIQIE 10
AC NEL +E
Sbjct: 144 ACLNELDGVE 153


>sp|COFH1_METMA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina mazei (strain ATCC

Query: 1 ACYNELIQIE 10
AC+ E+I ++
Sbjct: 326 ACHGEMITVD 335


>sp|COFH1_METAC|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase 1|Methanosarcina acetivorans (strain

Query: 1 ACYNELIQIE 10
AC+ E+I ++
Sbjct: 326 ACHGEMITVD 335


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CYNEL 6
CYNEL
Sbjct: 269 CYNEL 273




51|Sequence|251|260|LIQIEHGEVR

>sp|AROA_META3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanococcus aeolicus (strain ATCC

Query: 2 IQIEHGEVR 10
I +EHGE++
Sbjct: 148 IIVEHGEIK 156


>sp|HISX_PICTO|HISTIDINOL dehydrogenase|Picrophilus torridus (strain ATCC 700027

Query: 1 LIQIEHGE 8
L Q+EHGE
Sbjct: 224 LSQLEHGE 231


>sp|PORB_METJA|PYRUVATE synthase subunit PorB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LIQIEHGEVR 10
L +IE+GE R
Sbjct: 244 LYEIENGEFR 253


>sp|Y656_PYRAB|UNCHARACTERIZED protein PYRAB06560|Pyrococcus abyssi (strain GE5 /

Query: 4 IEHGEV 9
IEHGEV
Sbjct: 63 IEHGEV 68


>sp|Y1513_PYRHO|UNCHARACTERIZED protein PH1513|Pyrococcus horikoshii (strain ATCC 700860

Query: 4 IEHGEV 9
IEHGEV
Sbjct: 66 IEHGEV 71


>sp|Y580_METJA|UNCHARACTERIZED protein MJ0580|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIQIEHGEVR 10
+++IE+GE++
Sbjct: 33 IVEIENGEIK 42


>sp|NADK_METB6|NAD kinase|Methanoregula boonei (strain DSM 21154

Query: 1 LIQIEHGEV 9
+I I HGEV
Sbjct: 79 IIGINHGEV 87


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 1 LIQIEHGE 8
LIQI +GE
Sbjct: 852 LIQIRYGE 859


>sp|HIS7_METTH|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IQIEHGEV 9
+++EHGE+
Sbjct: 180 VRVEHGEI 187


>sp|RL10E_CALMQ|LARGE ribosomal subunit protein uL16|Caldivirga maquilingensis (strain

Query: 2 IQIEHGEV 9
IQIE GEV
Sbjct: 127 IQIEPGEV 134


>sp|Y1890_THEKO|UNCHARACTERIZED protein TK1890|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 IEHGEV 9
IEHGEV
Sbjct: 65 IEHGEV 70




52|Sequence|256|265|HGEVRSQFKL

>sp|DNLI_METPE|DNA ligase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 HGEVRSQFK 9
HGEV +FK
Sbjct: 239 HGEVAVEFK 247


>sp|RPO1N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanocaldococcus jannaschii (strain

Query: 1 HGEVRSQFK 9
HG VRS +K
Sbjct: 1239 HGFVRSSYK 1247


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GEVRSQFKL 10
GE+++ FK+
Sbjct: 133 GEIKTNFKI 141


>sp|AMYA_PYRFU|ALPHA-AMYLASE furiosus (strain ATCC 43587

Query: 1 HGEVRSQF 8
HG V SQF
Sbjct: 445 HGYVESQF 452




53|Sequence|261|270|SQFKLRACNS

***** No hits found ******


54|Sequence|266|275|RACNSVFTAL

>sp|MTAP_SACS2|S-METHYL-5'-THIOADENOSINE phosphorylase|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 CNSVFTAL 10
CNS+ TAL
Sbjct: 262 CNSLKTAL 269




55|Sequence|271|280|VFTALDHCHE

>sp|G1PDH_KORCO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Korarchaeum cryptofilum (strain OPF8)

Query: 4 ALDHCHE 10
A+DH HE
Sbjct: 168 AMDHAHE 174


>sp|FTHS_HALMA|FORMATE--TETRAHYDROFOLATE ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 VFTALDHCHE 10
V LDHC E
Sbjct: 384 VQAVLDHCRE 393


>sp|CCA_METBF|CCA-ADDING enzyme|Methanosarcina barkeri (strain Fusaro /

Query: 3 TALDHCHE 10
T +DHC E
Sbjct: 253 TFIDHCRE 260


>sp|SYA_STAMF|ALANINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 1 VFTALDH 7
++TALDH
Sbjct: 318 LYTALDH 324


>sp|DAPH_METKA|2,3,4,5-TETRAHYDROPYRIDINE-2,6-DICARBOXYLATE N-acetyltransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 VFTALDH 7
VFT +DH
Sbjct: 50 VFTGVDH 56


>sp|CCA_METAC|CCA-ADDING enzyme|Methanosarcina acetivorans (strain ATCC 35395

Query: 5 LDHCHE 10
+DHC E
Sbjct: 255 MDHCRE 260


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 5 LDHCHE 10
+DHC E
Sbjct: 255 IDHCRE 260




56|Sequence|276|285|DHCHEAIEIT

>sp|GLNA_METMP|GLUTAMINE synthetase|Methanococcus maripaludis (strain DSM 14266

Query: 2 HCHEAI 7
HCH++I
Sbjct: 248 HCHQSI 253


>sp|DAPA_METS3|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 4 HEAIEIT 10
HEAIE+T
Sbjct: 84 HEAIELT 90


>sp|RL44E_THEAC|LARGE ribosomal subunit protein eL42|Thermoplasma acidophilum (strain

Query: 1 DHCHEAI 7
D CH+AI
Sbjct: 72 DECHKAI 78


>sp|RPO3_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo3|Pyrobaculum aerophilum (strain ATCC

Query: 1 DHCHEAIEIT 10
D C E +E+T
Sbjct: 201 DLCKEGLEVT 210


>sp|GLNA_METJA|GLUTAMINE synthetase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HCHEAI 7
HCH+++
Sbjct: 255 HCHQSV 260


>sp|DNLI_HALVD|DNA ligase|Haloferax volcanii (strain ATCC 29605

Query: 3 CHEAI 7
CHEAI
Sbjct: 64 CHEAI 68


>sp|DPOL_ARCFU|DNA polymerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 DHCHEAIEI 9
D C+EA E+
Sbjct: 434 DDCYEAPEV 442


>sp|DNAG_HALLT|DNA primase DnaG|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 CHEAIEIT 10
CH ++E+T
Sbjct: 96 CHASVEVT 103


>sp|NURA_METJA|PROBABLE DNA double-strand break repair|Methanocaldococcus jannaschii

Query: 4 HEAIEIT 10
HE +EIT
Sbjct: 354 HETVEIT 360


>sp|ARLY_PYRFU|ARGININOSUCCINATE lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 HEAIEI 9
HEAIEI
Sbjct: 79 HEAIEI 84


>sp|SYDND_METTH|ASPARTATE--TRNA(ASP/ASN) ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DHCHEAIE 8
+HC +A+E
Sbjct: 264 EHCTDALE 271


>sp|Y141_THEKO|UPF0173 metal-dependent hydrolase TK0141|Thermococcus kodakarensis

Query: 1 DHCHEAIEI 9
DH +AIEI
Sbjct: 52 DHIGDAIEI 60


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 2 HCHEAI 7
HCH A+
Sbjct: 52 HCHPAV 57


>sp|GLNA_METTH|GLUTAMINE synthetase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 HCHEAI 7
HCH+++
Sbjct: 244 HCHQSL 249




57|Sequence|281|290|AIEITSDDHV

>sp|MUTS2_HALMA|DNA mismatch repair protein MutS|Haloarcula marismortui (strain ATCC

Query: 1 AIEITSDDHV 10
A E TSDDH
Sbjct: 890 AGEATSDDHA 899


>sp|HELS_PYRHO|ATP-DEPENDENT DNA helicase Hel308|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IEITSDDHV 10
IEIT DD +
Sbjct: 469 IEITLDDEI 477


>sp|THS1_HALVD|CHAPERONIN subunit CTT1|Haloferax volcanii (strain ATCC 29605

Query: 1 AIEITSDDH 9
AIE+T DD
Sbjct: 145 AIEVTEDDR 153


>sp|HMU_HALWD|HALOMUCIN walsbyi (strain DSM 16790

Query: 2 IEITSDD 8
IE+TSDD
Sbjct: 4705 IEMTSDD 4711


>sp|ARCH_METTH|PROTEIN archease|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 IEITSDDHV 10
+EITS+D V
Sbjct: 51 VEITSEDRV 59


>sp|RPO11_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo11|Natronomonas pharaonis (strain ATCC

Query: 1 AIEITSDDH 9
AIEI +DH
Sbjct: 14 AIEIEGEDH 22


>sp|GUAAA_METHJ|GMP synthase [glutamine-hydrolyzing] subunit A|Methanospirillum

Query: 1 AIEITSDDH 9
A+E+T DH
Sbjct: 99 AVEVTITDH 107




58|Sequence|286|295|SDDHVIQYVN

>sp|UVRC_METHJ|UVRABC system protein C|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 SDDHVIQYV 9
SD+H+I Y+
Sbjct: 242 SDEHIINYL 250


>sp|Y948_PYRAB|UNCHARACTERIZED ATP-binding protein PYRAB09480|Pyrococcus abyssi (strain GE5 /

Query: 2 DDHVIQYVN 10
DDH+ Y+N
Sbjct: 47 DDHIAFYIN 55


>sp|TRMY_PYRHO|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus horikoshii

Query: 4 HVIQYVN 10
HVI YVN
Sbjct: 188 HVISYVN 194


>sp|Y1571_METJA|UNCHARACTERIZED protein MJ1571|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 DHVIQYVN 10
+HVI+Y+N
Sbjct: 26 EHVIKYLN 33


>sp|TRMY_PYRAB|TRNA (pseudouridine(54)-N(1))-methyltransferase|Pyrococcus abyssi

Query: 4 HVIQYVN 10
HVI YVN
Sbjct: 189 HVIAYVN 195


>sp|AATF_METHJ|A-TYPE ATP synthase subunit F|Methanospirillum hungatei JF-1 (strain

Query: 1 SDDHVIQYVN 10
SD+ V++YV+
Sbjct: 28 SDEKVVEYVH 37


>sp|TRMY_THEON|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus onnurineus

Query: 4 HVIQYVN 10
HV+ YVN
Sbjct: 187 HVVAYVN 193


>sp|IF2B_ARCFU|TRANSLATION initiation factor 2 subunit|Archaeoglobus fulgidus (strain ATCC

Query: 1 SDDHVIQYV 9
S+DH+ +Y+
Sbjct: 56 SEDHLYKYI 64


>sp|GGR_META3|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 SDDHVIQYVN 10
S+D++++Y N
Sbjct: 316 SEDYLVEYEN 325


>sp|TRMY_THEGJ|TRNA (pseudouridine(54)-N(1))-methyltransferase|Thermococcus

Query: 4 HVIQYVN 10
HV+ Y+N
Sbjct: 186 HVVAYIN 192


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 1 SDDHVIQY 8
S DHVI Y
Sbjct: 1256 SGDHVISY 1263


>sp|Y2025_ARCFU|UNCHARACTERIZED protein AF_2025|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 SDDHVIQYVN 10
SD+ V +Y+N
Sbjct: 133 SDEEVAKYLN 142


>sp|IF2B_HALMA|TRANSLATION initiation factor 2 subunit|Haloarcula marismortui (strain ATCC

Query: 2 DDHVIQYV 9
DDHV++++
Sbjct: 54 DDHVMKFL 61


>sp|TIAS_THEVO|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Thermoplasma volcanium (strain

Query: 1 SDDHVIQYVN 10
+DDH+I N
Sbjct: 265 TDDHIIDEPN 274


>sp|Y147_METJA|UNCHARACTERIZED ATP-binding protein MJ0147|Methanocaldococcus jannaschii (strain

Query: 1 SDDHVIQYVN 10
SDD+ + Y+N
Sbjct: 52 SDDYKVFYIN 61




59|Sequence|291|300|IQYVNPAFER

>sp|CAS10_METJA|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 IQYVNPAFE 9
I +VNP FE
Sbjct: 690 IVFVNPKFE 698


>sp|TRPA_METM5|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C5 /

Query: 1 IQYVNPAFER 10
+ Y NP F+R
Sbjct: 85 MTYYNPVFKR 94


>sp|TRPA_METM7|TRYPTOPHAN synthase alpha chain|Methanococcus maripaludis (strain C7 /

Query: 1 IQYVNPAFER 10
+ Y NP F+R
Sbjct: 85 MTYYNPVFKR 94


>sp|SYL1_SULAC|LEUCINE--TRNA ligase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 4 VNPAFER 10
++PAFER
Sbjct: 149 IDPAFER 155


>sp|MCRG_METVO|METHYL-COENZYME M reductase subunit gamma|Methanococcus voltae

Query: 3 YVNPAFE 9
++NPAFE
Sbjct: 21 HINPAFE 27


>sp|AROD_SULAC|3-DEHYDROQUINATE dehydratase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 IQYVNPAFE 9
+ Y++PAF+
Sbjct: 70 VNYIDPAFK 78


>sp|R15PI_PYRFU|RIBOSE 1,5-bisphosphate isomerase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IQYVNPAFE 9
I+ +NPAF+
Sbjct: 274 IEVLNPAFD 282


>sp|TFE_CALMQ|TRANSCRIPTION factor E|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 IQYVNPA 7
++Y+NPA
Sbjct: 152 LEYINPA 158


>sp|IORA_METTM|INDOLEPYRUVATE oxidoreductase subunit IorA|Methanothermobacter marburgensis

Query: 1 IQYVNPAFE 9
++Y+N AFE
Sbjct: 152 LEYMNHAFE 160


>sp|NDRZ_PYRFU|VITAMIN B12-dependent ribonucleoside-diphosphate reductase|Pyrococcus

Query: 3 YVNPAFE 9
YV+P FE
Sbjct: 1504 YVDPVFE 1510


>sp|DCDB_METS3|DCTP deaminase, dUMP-forming|Methanobrevibacter smithii (strain ATCC

Query: 3 YVNPAFE 9
YV+P FE
Sbjct: 121 YVDPGFE 127


>sp|Y751_METJA|TNPB-LIKE protein MJ0751|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 IQYVNPA 7
++YVNP+
Sbjct: 210 VEYVNPS 216


>sp|GNTDO_HALSB|GENTISATE 1,2-dioxygenase|Haloferax sp

Query: 1 IQYVNPA 7
+ YVNPA
Sbjct: 258 LSYVNPA 264




60|Sequence|296|305|PAFERMMGYH

>sp|SYV_THEVO|VALINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 3 FERMMGYH 10
++RM GYH
Sbjct: 63 YKRMRGYH 70


>sp|SYI_SULAC|ISOLEUCINE--TRNA ligase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FERMMGY 9
+ER+MGY
Sbjct: 69 YERLMGY 75


>sp|SYV_THEAC|VALINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 FERMMGYH 10
++RM GYH
Sbjct: 63 YKRMRGYH 70


>sp|MBD_THEVO|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma volcanium (strain

Query: 2 AFERMMGYH 10
AFE+ +GY+
Sbjct: 51 AFEKFLGYY 59


>sp|MBD_THEAC|MEVALONATE 3,5-bisphosphate decarboxylase|Thermoplasma acidophilum (strain

Query: 2 AFERMMGYH 10
AFE+ +GY+
Sbjct: 77 AFEKFLGYY 85


>sp|CYB_SULAC|CYTOCHROME b|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 FERMMGYH 10
F+R++G+H
Sbjct: 191 FDRLLGWH 198


>sp|TRXB_METJA|PUTATIVE thioredoxin reductase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 PAFERMMGY 9
P FE + GY
Sbjct: 50 PGFEEIRGY 58


>sp|SYI_METJA|ISOLEUCINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 69 FKRMQGYN 76


>sp|GATE_PYRAE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Pyrobaculum aerophilum (strain ATCC

Query: 1 PAFERMMGY 9
P F++++G+
Sbjct: 310 PGFQKLLGF 318


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 66 FKRMQGYN 73


>sp|SYL_PYRHO|LEUCINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 66 FKRMQGYN 73


>sp|TRUD_PYRAE|PROBABLE tRNA pseudouridine synthase D|Pyrobaculum aerophilum (strain ATCC

Query: 1 PAFERMMG 8
P+F++M+G
Sbjct: 5 PSFDKMLG 12


>sp|SYL_PYRAB|LEUCINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 66 FKRMQGYN 73


>sp|SYL_THEKO|LEUCINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 66 FKRMQGYN 73


>sp|SYL_THEON|LEUCINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 66 FKRMQGYN 73


>sp|RL18_METPE|LARGE ribosomal subunit protein uL18|Methanosphaerula palustris (strain

Query: 1 PAFERMMGYH 10
PA ER+ G H
Sbjct: 138 PADERVKGEH 147


>sp|SYL_METKA|LEUCINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 59 FKRMQGYN 66


>sp|SYL_METTH|LEUCINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 3 FERMMGYH 10
F+RM GY+
Sbjct: 57 FKRMQGYN 64




61|Sequence|301|310|MMGYHKGELL

>sp|Y666_METJA|PUTATIVE molybdopterin biosynthesis protein MJ0666|Methanocaldococcus

Query: 3 GYHKGELL 10
GY KGEL+
Sbjct: 385 GYEKGELV 392


>sp|HPRT_METTM|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter marburgensis (strain

Query: 1 MMGYHKGEL 9
M GY +GEL
Sbjct: 101 MTGYSEGEL 109


>sp|HPRT_METTH|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermobacter thermautotrophicus

Query: 1 MMGYHKGEL 9
M GY +GEL
Sbjct: 98 MTGYSEGEL 106


>sp|HPRT_METVS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus vannielii (strain ATCC

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_METV3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus voltae (strain ATCC

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_METAR|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanocella arvoryzae (strain DSM 22066

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_METPW|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanobacterium paludis (strain DSM

Query: 1 MMGYHKGEL 9
M GY +GEL
Sbjct: 98 MTGYSEGEL 106


>sp|HPRT_METMP|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_META3|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus aeolicus (strain ATCC

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 99 GYSKGEL 105


>sp|HPRT_METM7|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_METM5|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_METMS|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanohalophilus mahii (strain ATCC

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|HPRT_METM6|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 2 MGYHK 6
MGYHK
Sbjct: 253 MGYHK 257


>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 2 MGYHK 6
MGYHK
Sbjct: 252 MGYHK 256


>sp|HPRT_METOI|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanothermococcus okinawensis (strain

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 99 GYSKGEL 105


>sp|PMDHL_THEKO|PHOSPHOMEVALONATE dehydratase large subunit|Thermococcus kodakarensis (strain ATCC

Query: 1 MMGYHKGELL 10
++GYH G+ L
Sbjct: 192 VLGYHVGKTL 201


>sp|HPRT_METHJ|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanospirillum hungatei JF-1 (strain

Query: 1 MMGYHKGEL 9
+ GY KGE+
Sbjct: 99 VTGYSKGEM 107


>sp|HPRT_METPE|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanosphaerula palustris (strain ATCC

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 101 GYSKGEL 107


>sp|ADH_SACS2|NAD-DEPENDENT alcohol dehydrogenase|Saccharolobus solfataricus (strain ATCC

Query: 1 MMGYHKGELL 10
++GY KG+L+
Sbjct: 81 VVGYSKGDLV 90


>sp|HPRT_METBU|HYPOXANTHINE/GUANINE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 3 GYHKGEL 9
GY KGEL
Sbjct: 100 GYSKGEL 106


>sp|ADH_SULSR|NAD-DEPENDENT alcohol dehydrogenase|Sulfolobus sp. (strain RC3)

Query: 1 MMGYHKGELL 10
++GY KG+L+
Sbjct: 81 VVGYSKGDLV 90


>sp|KAE1B_NATPD|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 MMGYHKG 7
++GYH G
Sbjct: 142 VLGYHNG 148


>sp|COBD_ARCFU|PROBABLE cobalamin biosynthesis protein CobD|Archaeoglobus fulgidus (strain

Query: 1 MMGYHKG 7
M+GY KG
Sbjct: 170 MVGYRKG 176


>sp|ADH_SULTO|NAD-DEPENDENT alcohol dehydrogenase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 MMGYHKGELL 10
++GY KG+L+
Sbjct: 81 VVGYSKGDLV 90


>sp|ENO_THEKO|ENOLASE kodakarensis (strain ATCC BAA-918

Query: 4 YHKGELL 10
Y KGELL
Sbjct: 266 YDKGELL 272


>sp|Y780_METJA|UNCHARACTERIZED protein MJ0780|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 MMGYHKGEL 9
++GY+KG L
Sbjct: 240 IVGYNKGNL 248


>sp|Y727_METJA|UNCHARACTERIZED protein MJ0727|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 YHKGELL 10
YHK ELL
Sbjct: 251 YHKVELL 257


>sp|DPOL_PYRGL|DNA polymerase|Pyrococcus glycovorans

Query: 3 GYHKGEL 9
GY KG+L
Sbjct: 750 GYRKGDL 756




62|Sequence|306|315|KGELLGKELA

>sp|FOLD_PYRCJ|BIFUNCTIONAL protein FolD|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KGELLGKELA 10
KGEL+GK LA
Sbjct: 171 KGELVGKPLA 180


>sp|FOLD_PYRAE|BIFUNCTIONAL protein FolD|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KGELLGKELA 10
KGEL+GK LA
Sbjct: 175 KGELVGKPLA 184


>sp|FOLD_PYRAR|BIFUNCTIONAL protein FolD|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 KGELLGKELA 10
KGEL+GK L+
Sbjct: 175 KGELVGKPLS 184


>sp|Y672_METM7|UPF0210 protein MmarC7_0672|Methanococcus maripaludis (strain C7 /

Query: 2 GELLGKELA 10
GEL+GKE+A
Sbjct: 260 GELVGKEVA 268


>sp|Y1412_META3|UPF0210 protein Maeo_1412|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 2 GELLGKELA 10
GEL+G+E+A
Sbjct: 260 GELIGREVA 268


>sp|Y1246_METM6|UPF0210 protein MmarC6_1246|Methanococcus maripaludis (strain C6 /

Query: 2 GELLGKELA 10
GEL+GKE+A
Sbjct: 260 GELVGKEVA 268


>sp|Y151_METM5|UPF0210 protein MmarC5_0151|Methanococcus maripaludis (strain C5 /

Query: 2 GELLGKELA 10
GEL+GKE+A
Sbjct: 260 GELVGKEVA 268


>sp|Y759_PYRIL|UPF0210 protein Pisl_0759|Pyrobaculum islandicum (strain DSM 4184

Query: 2 GELLGKELA 10
GEL+G+E+A
Sbjct: 249 GELVGREVA 257


>sp|Y738_METVS|UPF0210 protein Mevan_0738|Methanococcus vannielii (strain ATCC 35089

Query: 2 GELLGKELA 10
GEL+G+E+A
Sbjct: 260 GELVGREVA 268


>sp|Y1427_METMP|UPF0210 protein MMP1427|Methanococcus maripaludis (strain DSM 14266

Query: 2 GELLGKELA 10
GEL+GKE+A
Sbjct: 260 GELVGKEVA 268


>sp|GAL1_THEKO|GALACTOKINASE kodakarensis (strain ATCC BAA-918

Query: 1 KGELLGKELA 10
KGE LG+E+A
Sbjct: 316 KGESLGREVA 325


>sp|G1PDH_CALMQ|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Caldivirga maquilingensis (strain ATCC

Query: 2 GELLGKELA 10
GELLGK++A
Sbjct: 168 GELLGKKVA 176


>sp|PYRH_METAC|URIDYLATE kinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GELLGKELA 10
GE+LG+E+A
Sbjct: 210 GEILGEEVA 218


>sp|RAD50_SULTO|DNA double-strand break repair Rad50|Sulfurisphaera tokodaii (strain

Query: 1 KGELLGK 7
KGELLGK
Sbjct: 679 KGELLGK 685


>sp|Y1033_PYRAR|UPF0210 protein Pars_1033|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 GELLGKELA 10
GEL+G+E+A
Sbjct: 249 GELVGREVA 257


>sp|Y1665_METJA|UPF0210 protein MJ1665|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GELLGKELA 10
GEL+G+E++
Sbjct: 260 GELIGREVS 268


>sp|PNPH_KORCO|PROBABLE 6-oxopurine nucleoside phosphorylase|Korarchaeum cryptofilum

Query: 2 GELLGKELA 10
GEL G+E+A
Sbjct: 36 GELAGEEVA 44


>sp|SYR_PYRAB|ARGININE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 2 GELLGKELA 10
GEL G+ELA
Sbjct: 238 GELNGRELA 246


>sp|KAD_THEON|ADENYLATE kinase|Thermococcus onnurineus (strain NA1)

Query: 1 KGELLGKEL 9
KG LGKEL
Sbjct: 41 KGSELGKEL 49


>sp|Y1691_METAC|UPF0210 protein MA_1691|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GELLGKELA 10
GE++GKE++
Sbjct: 266 GEMVGKEVS 274


>sp|Y3581_PYRAE|UPF0210 protein PAE3581|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GELLGKELA 10
GEL+G+E++
Sbjct: 249 GELVGREVS 257


>sp|Y1322_METST|UPF0280 protein Msp_1322|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 KGELLGK 7
KGE LGK
Sbjct: 216 KGETLGK 222


>sp|Y1534_PYRCJ|UPF0284 protein Pcal_1534|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 KGELLGKELA 10
+G +LG+EL
Sbjct: 121 RGRMLGRELG 130


>sp|LADH_METVS|LACTALDEHYDE dehydrogenase|Methanococcus vannielii (strain ATCC 35089

Query: 2 GELLGKELA 10
GE++G E+A
Sbjct: 200 GEIVGDEIA 208




63|Sequence|311|320|GKELADLPKS

>sp|TRUD_THEAC|PROBABLE tRNA pseudouridine synthase D|Thermoplasma acidophilum (strain

Query: 2 KELADLPKS 10
+E+AD+PKS
Sbjct: 29 EEVADIPKS 37


>sp|GATE_THEVO|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma volcanium (strain ATCC

Query: 1 GKELADLPKS 10
GKELADL ++
Sbjct: 318 GKELADLVRA 327


>sp|GATE_THEAC|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Thermoplasma acidophilum (strain ATCC

Query: 1 GKELADLPKS 10
GKE+ADL +S
Sbjct: 315 GKEIADLVRS 324


>sp|RADA_METLZ|DNA repair and recombination protein|Methanocorpusculum labreanum

Query: 1 GKELADLPK 9
G ELADLP+
Sbjct: 157 GLELADLPE 165


>sp|PURL_SULAC|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 GKELADLPKS 10
GKE+ +LP S
Sbjct: 340 GKEVVNLPSS 349


>sp|KAE1B_METJA|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GKELADLP 8
GK+L DLP
Sbjct: 182 GKKLVDLP 189


>sp|Y038_PYRAB|UPF0284 protein PYRAB00380|Pyrococcus abyssi (strain GE5 /

Query: 2 KELADLP 8
KELAD P
Sbjct: 70 KELADFP 76


>sp|ATGT_SULTO|TRNA-GUANINE(15) transglycosylase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 2 KELADLPK 9
KEL +LPK
Sbjct: 286 KELLELPK 293


>sp|ATGT_THEVO|TRNA-GUANINE(15) transglycosylase|Thermoplasma volcanium (strain ATCC 51530

Query: 2 KELADLPK 9
KEL +LPK
Sbjct: 280 KELKELPK 287


>sp|MRE11_SULAC|DNA double-strand break repair protein|Sulfolobus acidocaldarius

Query: 3 ELADLPK 9
EL+DLPK
Sbjct: 172 ELSDLPK 178


>sp|HELS_PYRCJ|ATP-DEPENDENT DNA helicase Hel308|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 GKELADL 7
G+ELADL
Sbjct: 293 GRELADL 299


>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 GKELADLPKS 10
GK+L +LP S
Sbjct: 183 GKDLLELPYS 192


>sp|ACDA2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit alpha|Archaeoglobus fulgidus

Query: 1 GKELADLPK 9
GKE+AD+ +
Sbjct: 203 GKEIADIAQ 211


>sp|SYFA_METBF|PHENYLALANINE--TRNA ligase alpha subunit|Methanosarcina barkeri (strain Fusaro /

Query: 2 KELADLPKS 10
K LAD PKS
Sbjct: 340 KYLADHPKS 348


>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 4 LADLPKS 10
LADLP+S
Sbjct: 435 LADLPES 441


>sp|MTAC_METBF|METHANOL--CORRINOID protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 GKELADLPK 9
G+E AD PK
Sbjct: 228 GEEAADAPK 236




64|Sequence|316|325|DLPKSDKNRA

>sp|AATB_THEVO|A-TYPE ATP synthase subunit B|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLPKSDKNR 9
DLP+SD R
Sbjct: 437 DLPESDMKR 445


>sp|AGOG_PYRFU|N-GLYCOSYLASE/DNA lyase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 LPKSDKNR 9
LPKS NR
Sbjct: 87 LPKSKNNR 94




65|Sequence|321|330|DKNRADLLDT

>sp|DAPB_METST|4-HYDROXY-TETRAHYDRODIPICOLINATE reductase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DKNRADLLD 9
DKN AD+ D
Sbjct: 261 DKNIADMFD 269


>sp|RL1_METBU|LARGE ribosomal subunit protein uL1|Methanococcoides burtonii (strain DSM

Query: 1 DKNRADLLDT 10
DKN ADL+++
Sbjct: 137 DKNVADLINS 146




66|Sequence|326|335|DLLDTINTCI

>sp|SYM_METBU|METHIONINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 DLLDTINTCI 10
D+LD INT I
Sbjct: 414 DILDEINTTI 423


>sp|RS8_PICTO|SMALL ribosomal subunit protein uS8|Picrophilus torridus (strain ATCC

Query: 1 DLLDTINTC 9
+L DTIN C
Sbjct: 63 ELSDTINNC 71


>sp|URE1_HALMA|UREASE subunit alpha|Haloarcula marismortui (strain ATCC 43049

Query: 4 DTINTCI 10
+TINTC+
Sbjct: 227 ETINTCL 233


>sp|AROB_THEVO|3-DEHYDROQUINATE synthase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 DLLDTINTC 9
D+ DT+N C
Sbjct: 193 DMYDTLNRC 201


>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DLLDTINTCI 10
DL+ IN C+
Sbjct: 8 DLIPNINKCL 17


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 3 LDTINT 8
LDTINT
Sbjct: 280 LDTINT 285


>sp|RNH2_METB6|RIBONUCLEASE HII|Methanoregula boonei (strain DSM 21154

Query: 5 TINTCI 10
T+NTC+
Sbjct: 77 TLNTCV 82


>sp|AROA_METS3|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Methanobrevibacter smithii (strain ATCC

Query: 1 DLLDTINTC 9
D+L +IN C
Sbjct: 48 DVLSSINVC 56




67|Sequence|331|340|INTCIKKGKE

>sp|PGK_PYRAE|PHOSPHOGLYCERATE kinase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 INTCIKKGK 9
IN C+KKGK
Sbjct: 13 INKCLKKGK 21


>sp|TRM56_METHJ|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanospirillum hungatei

Query: 2 NTCIKKGKE 10
N+CIK+ K+
Sbjct: 66 NSCIKRWKQ 74


>sp|Y1076_METJA|UNCHARACTERIZED ATP-binding protein MJ1076|Methanocaldococcus jannaschii (strain

Query: 1 INTCIKKGK 9
INT IK GK
Sbjct: 119 INTVIKDGK 127


>sp|RPO1C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo1C|Methanococcus vannielii (strain ATCC

Query: 1 INTCIKKGKE 10
IN CIKK E
Sbjct: 372 INVCIKKEYE 381


>sp|Y3551_METAC|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina acetivorans

Query: 1 INTCIKKGKE 10
IN IKKGK+
Sbjct: 23 INIEIKKGKK 32


>sp|GLPA2_HALVD|ANAEROBIC glycerol-3-phosphate dehydrogenase subunit A2|Haloferax volcanii

Query: 1 INTCIKKGK 9
IN C+ KG+
Sbjct: 247 INRCLPKGE 255


>sp|Y462_METMA|PUTATIVE ABC transporter ATP-binding protein|Methanosarcina mazei (strain

Query: 1 INTCIKKGKE 10
IN IKKGK+
Sbjct: 23 INIEIKKGKK 32


>sp|HIS4_METMA|1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] imidazole-4-carboxamide isomerase|Methanosarcina mazei (strain

Query: 1 INTCIKKG 8
+NTC +KG
Sbjct: 72 VNTCKEKG 79


>sp|RADB_METBU|DNA repair and recombination protein|Methanococcoides burtonii

Query: 4 CIKKGK 9
C+KKGK
Sbjct: 50 CVKKGK 55




68|Sequence|336|345|KKGKEWQGVY

>sp|UPP_THEKO|URACIL phosphoribosyltransferase|Thermococcus kodakarensis (strain ATCC

Query: 1 KKGKEWQGVY 10
K+ + W+GVY
Sbjct: 2 KRDERWEGVY 11


>sp|Y800_METJA|UNCHARACTERIZED protein MJ0800|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GKEWQGVY 10
G EW GVY
Sbjct: 13 GAEWSGVY 20


>sp|UPP_METMP|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain DSM

Query: 2 KGKEWQGVY 10
K + W+GVY
Sbjct: 3 KDERWEGVY 11


>sp|UPP_METM6|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C6 /

Query: 2 KGKEWQGVY 10
K + W+GVY
Sbjct: 3 KDERWEGVY 11


>sp|UPP_METM5|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C5 /

Query: 2 KGKEWQGVY 10
K + W+GVY
Sbjct: 3 KDERWEGVY 11


>sp|UPP_METM7|URACIL phosphoribosyltransferase|Methanococcus maripaludis (strain C7 /

Query: 2 KGKEWQGVY 10
K + W+GVY
Sbjct: 3 KDERWEGVY 11


>sp|RL3_PYRAR|LARGE ribosomal subunit protein uL3|Pyrobaculum arsenaticum (strain DSM

Query: 2 KGKEWQGV 9
KGK WQGV
Sbjct: 208 KGKGWQGV 215


>sp|Y1470_METJA|UNCHARACTERIZED protein MJ1470|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KKGKEWQGVY 10
KK +EW G Y
Sbjct: 409 KKYEEWGGFY 418


>sp|UPP_PYRAB|URACIL phosphoribosyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 4 KEWQGVY 10
K W+GVY
Sbjct: 5 KRWKGVY 11


>sp|FAU1_STAMF|PROBABLE ribonuclease FAU-1|Staphylothermus marinus (strain ATCC 43588

Query: 2 KGKEWQGVY 10
+G EW G Y
Sbjct: 392 RGNEWLGSY 400


>sp|CDPAS_STAMF|CDP-ARCHAEOL synthase|Staphylothermus marinus (strain ATCC 43588

Query: 2 KGKEWQGVY 10
K K W+G Y
Sbjct: 54 KNKTWEGFY 62


>sp|UPP_THEGJ|URACIL phosphoribosyltransferase|Thermococcus gammatolerans (strain DSM

Query: 1 KKGKEWQGVY 10
++ + W GVY
Sbjct: 2 RRDERWDGVY 11


>sp|Y1319_METJA|UNCHARACTERIZED sodium-dependent transporter MJ1319|Methanocaldococcus jannaschii

Query: 2 KGKEWQGVY 10
KG EW G +
Sbjct: 83 KGSEWTGWF 91


>sp|ACDA2_METKA|PUTATIVE acetyl-CoA decarbonylase/synthase complex subunit|Methanopyrus

Query: 3 GKEWQGV 9
G EW+GV
Sbjct: 2 GIEWEGV 8


>sp|CAS5_ARCFU|CRISPR-ASSOCIATED protein Cas5|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KKGKEWQ 7
KKGK+W+
Sbjct: 216 KKGKKWK 222


>sp|AROA_ARCFU|3-PHOSPHOSHIKIMATE 1-carboxyvinyltransferase|Archaeoglobus fulgidus (strain ATCC

Query: 1 KKGKEW 6
KKG EW
Sbjct: 63 KKGNEW 68


>sp|UPP_THEON|URACIL phosphoribosyltransferase|Thermococcus onnurineus (strain NA1)

Query: 2 KGKEWQGVY 10
+ + W+GVY
Sbjct: 3 RDERWEGVY 11


>sp|PNCB_METAC|NICOTINATE phosphoribosyltransferase|Methanosarcina acetivorans (strain ATCC

Query: 3 GKEWQG 8
GKEW G
Sbjct: 140 GKEWDG 145


>sp|DNLI_HALMA|DNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 KKGKEWQ 7
K+GK W+
Sbjct: 417 KRGKHWR 423


>sp|HOSA_PYRAB|HOMOCITRATE synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 KKGKEWQGVY 10
K G +W G++
Sbjct: 81 KTGVDWVGIF 90


>sp|RS13_SACS2|SMALL ribosomal subunit protein uS13|Saccharolobus solfataricus (strain

Query: 1 KKGKEWQGV 9
KK + W+GV
Sbjct: 111 KKSRSWRGV 119


>sp|UPP_PYRFU|URACIL phosphoribosyltransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 KEWQGVY 10
K W GVY
Sbjct: 5 KRWGGVY 11


>sp|CAS3_METJA|PUTATIVE CRISPR-associated nuclease/helicase Cas3|Methanocaldococcus

Query: 1 KKGKEWQ 7
+KGK+W+
Sbjct: 542 RKGKDWR 548


>sp|RGYR2_AERPE|REVERSE gyrase 2|Aeropyrum pernix (strain ATCC 700893

Query: 1 KKGKEWQG 8
+KG EW G
Sbjct: 450 EKGVEWAG 457


>sp|HIS1_PYRCJ|ATP phosphoribosyltransferase|Pyrobaculum calidifontis (strain DSM

Query: 1 KKGKEWQGV 9
+ GK W GV
Sbjct: 58 ESGKVWAGV 66


>sp|RL3_PYRCJ|LARGE ribosomal subunit protein uL3|Pyrobaculum calidifontis (strain DSM

Query: 2 KGKEWQGV 9
KGK +QGV
Sbjct: 208 KGKGYQGV 215


>sp|Y1120_THEKO|UPF0127 protein TK1120|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 KGKEWQG 8
KGK W G
Sbjct: 7 KGKAWHG 13


>sp|AMT2_ARCFU|AMMONIUM transporter Amt2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 GKEWQGV 9
G +WQG+
Sbjct: 97 GADWQGI 103


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 6 WQGVY 10
WQG+Y
Sbjct: 153 WQGIY 157


>sp|SYR_THESM|ARGININE--TRNA ligase|Thermococcus sibiricus (strain DSM 12597

Query: 1 KKGKEWQG 8
K+GK W+G
Sbjct: 24 KEGKTWEG 31


>sp|DNLI_METM5|DNA ligase|Methanococcus maripaludis (strain C5 /

Query: 2 KGKEWQGVY 10
K K+W G Y
Sbjct: 459 KRKDWYGSY 467


>sp|RL3_PYRAE|LARGE ribosomal subunit protein uL3|Pyrobaculum aerophilum (strain ATCC

Query: 2 KGKEWQGV 9
KGK +QGV
Sbjct: 208 KGKGYQGV 215




69|Sequence|341|350|WQGVYYARRK

>sp|ILVB_METJA|PROBABLE acetolactate synthase large subunit|Methanocaldococcus jannaschii

Query: 1 WQGVYYARRK 10
WQ +YY +R+
Sbjct: 483 WQNLYYGQRQ 492


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WQGVYY 6
WQG+YY
Sbjct: 153 WQGIYY 158


>sp|ILVB_METAO|PROBABLE acetolactate synthase large subunit|Methanococcus aeolicus

Query: 1 WQGVYYARRK 10
WQ ++Y +R+
Sbjct: 491 WQNLFYGKRQ 500


>sp|Y1489_METJA|MCM-LIKE protein MJ1489|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 VYYARRK 10
+YYAR+K
Sbjct: 523 IYYARQK 529


>sp|TRPB1_METTH|TRYPTOPHAN synthase beta chain 1|Methanothermobacter thermautotrophicus

Query: 3 GVYYAR 8
G+YYAR
Sbjct: 56 GLYYAR 61


>sp|FLAB5_PYRHO|FLAGELLIN B5|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WQGVYYA 7
W+ +YYA
Sbjct: 157 WKNLYYA 163


>sp|Y800_METJA|UNCHARACTERIZED protein MJ0800|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 WQGVYYARRK 10
W GVY+ K
Sbjct: 16 WSGVYHEIEK 25


>sp|Y1654_ARCFU|UNCHARACTERIZED protein AF_1654|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 WQGVYYA 7
W+ VYYA
Sbjct: 120 WEKVYYA 126


>sp|SEPS_METB6|O-PHOSPHOSERINE--TRNA(CYS) ligase|Methanoregula boonei (strain DSM 21154

Query: 1 WQGVYYAR 8
W+G Y R
Sbjct: 419 WEGTLYGR 426


>sp|RS12_METMA|SMALL ribosomal subunit protein uS12|Methanosarcina mazei (strain ATCC

Query: 1 WQGVYYARR 9
W+ YY RR
Sbjct: 20 WKDTYYGRR 28


>sp|RS12_METAC|SMALL ribosomal subunit protein uS12|Methanosarcina acetivorans (strain

Query: 1 WQGVYYARR 9
W+ YY RR
Sbjct: 20 WKDTYYGRR 28


>sp|CSA5B_SACS2|CRISPR type I-A cluster 2/Apern-associated|Saccharolobus solfataricus

Query: 2 QGVYYARR 9
+ VYYAR+
Sbjct: 115 EDVYYARK 122


>sp|PCKG_PYRHO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 WQGVYYARRK 10
W+ +YY K
Sbjct: 55 WKALYYGEEK 64


>sp|RL10E_METKA|LARGE ribosomal subunit protein uL16|Methanopyrus kandleri (strain AV19

Query: 1 WQGVYYARRK 10
W+G Y RR+
Sbjct: 12 WKGPAYTRRE 21


>sp|PCKG_PYRAB|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Pyrococcus abyssi (strain GE5 /

Query: 1 WQGVYYARRK 10
W+ +YY K
Sbjct: 55 WKALYYGEEK 64




70|Sequence|346|355|YARRKSGDSI

>sp|AROC_THEGJ|CHORISMATE synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 4 RKSGDSI 10
RKSGDS+
Sbjct: 193 RKSGDSV 199


>sp|Y1326_METJA|UNCHARACTERIZED GTP-binding protein MJ1326|Methanocaldococcus jannaschii (strain

Query: 1 YARRKSGDS 9
YA +KSGD+
Sbjct: 77 YAVKKSGDA 85


>sp|CBID_SULTO|COBALT-PRECORRIN-5B C(1)-methyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 YARRKSGDSI 10
+AR++ GD++
Sbjct: 210 FARKRYGDNV 219


>sp|DP2L_NANEQ|DNA polymerase II large subunit|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 YARRKSG 7
YAR+K+G
Sbjct: 164 YARKKAG 170




71|Sequence|351|360|SGDSIQQHVK

>sp|PRIS_METHJ|DNA primase small subunit PriS|Methanospirillum hungatei JF-1 (strain

Query: 1 SGDSIQQHVK 10
SGD +Q++VK
Sbjct: 56 SGDEMQEYVK 65


>sp|TDXH2_PICTO|PEROXIREDOXIN 2|Picrophilus torridus (strain ATCC 700027

Query: 1 SGDSIQQHVK 10
S DS+Q H++
Sbjct: 69 SVDSLQSHIE 78


>sp|GATB_HALMA|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloarcula marismortui (strain ATCC

Query: 1 SGDSIQQHV 9
SGD +QQ V
Sbjct: 445 SGDEVQQAV 453


>sp|RS3A_DESA1|SMALL ribosomal subunit protein eS1|Desulfurococcus amylolyticus

Query: 1 SGDSIQQHVK 10
+GD Q HVK
Sbjct: 56 TGDITQVHVK 65




72|Sequence|356|365|QQHVKITPVI

>sp|RPO3_SULTO|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfurisphaera tokodaii (strain DSM

Query: 1 QQHVKITPV 9
++H+K +PV
Sbjct: 152 KEHIKFSPV 160


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 QQHVKITPVI 10
Q+ VK+ P+I
Sbjct: 92 QKGVKVVPII 101


>sp|SURE_METBF|5'-NUCLEOTIDASE SurE|Methanosarcina barkeri (strain Fusaro /

Query: 3 HVKITPV 9
HV ITP+
Sbjct: 244 HVSITPI 250


>sp|SURE_METMA|5'-NUCLEOTIDASE SurE|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 HVKITPV 9
HV ITP+
Sbjct: 244 HVSITPI 250


>sp|Y976_METJA|UNCHARACTERIZED protein MJ0976|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 QQHVKITP 8
++H+KI P
Sbjct: 110 EEHIKIIP 117


>sp|RPO3_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo3|Sulfolobus acidocaldarius (strain ATCC

Query: 1 QQHVKITPV 9
++H+K +PV
Sbjct: 151 KEHIKYSPV 159


>sp|PYCB_METTH|PYRUVATE carboxylase subunit B|Methanothermobacter thermautotrophicus

Query: 1 QQHVKITPV 9
++HVK TP+
Sbjct: 70 KEHVKRTPI 78


>sp|Y1357_DESA1|MEMO1 family protein DKAM_1357|Desulfurococcus amylolyticus (strain DSM

Query: 2 QHVKITPVI 10
+ VKITP++
Sbjct: 153 EDVKITPIV 161




73|Sequence|361|370|ITPVIGQGGK

>sp|IDI2_THEAC|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ITPVIGQGG 9
+ PVIG GG
Sbjct: 261 LAPVIGSGG 269


>sp|IDI2_THEVO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 ITPVIGQGG 9
+ PVIG GG
Sbjct: 261 VLPVIGSGG 269


>sp|RPO2N_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2N|Methanocaldococcus jannaschii (strain

Query: 1 ITPVIGQG 8
+TP+IG+G
Sbjct: 95 MTPIIGEG 102


>sp|IDI2_PICTO|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Picrophilus torridus (strain ATCC 700027

Query: 3 PVIGQGG 9
PVIG GG
Sbjct: 263 PVIGSGG 269


>sp|CSD_HALSA|PROBABLE cysteine desulfurase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TPVIGQG 8
TPVI QG
Sbjct: 284 TPVIAQG 290


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITPVIGQGG 9
I P+IG GG
Sbjct: 247 IYPIIGVGG 255


>sp|GLGA_METJA|PROBABLE glycogen synthase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 ITPVIGQGG 9
ITP++ GG
Sbjct: 10 ITPIVSYGG 18


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis

Query: 1 ITPVIGQGG 9
IT +IGQ G
Sbjct: 25 ITSIIGQNG 33


>sp|YA00_PYRHO|PUTATIVE transport protein PH1000|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITPVIGQG 8
+TPVIGQ
Sbjct: 106 LTPVIGQA 113


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 3 PVIGQGG 9
P+I QGG
Sbjct: 197 PIIAQGG 203


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 1 ITPVIGQGG 9
I P++G GG
Sbjct: 244 IYPIVGVGG 252


>sp|Y085_METJA|UNCHARACTERIZED lipoprotein MJ0085|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 PVIGQGG 9
P IGQGG
Sbjct: 107 PTIGQGG 113


>sp|CAPPA_PYRAE|PHOSPHOENOLPYRUVATE carboxylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 ITPVIGQG 8
I+P++G G
Sbjct: 227 ISPIVGMG 234


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 ITPVIGQGGK 10
I IGQGGK
Sbjct: 329 INKSIGQGGK 338


>sp|Y1533_METJA|UNCHARACTERIZED KH and PIN-domain containing|Methanocaldococcus jannaschii (strain

Query: 1 ITPVIGQGGK 10
I +IG+GGK
Sbjct: 522 IGAIIGKGGK 531


>sp|RS3_HALMA|SMALL ribosomal subunit protein uS3|Haloarcula marismortui (strain ATCC

Query: 4 VIGQGGK 10
VIG+GGK
Sbjct: 54 VIGKGGK 60


>sp|LEU1_METAC|PROBABLE 2-isopropylmalate synthase|Methanosarcina acetivorans (strain ATCC

Query: 2 TPVIGQGG 9
TPV+GQ
Sbjct: 289 TPVVGQNA 296


>sp|LEU1_METMA|PROBABLE 2-isopropylmalate synthase|Methanosarcina mazei (strain ATCC

Query: 2 TPVIGQGG 9
TPV+GQ
Sbjct: 289 TPVVGQNA 296


>sp|RS3_HALSA|SMALL ribosomal subunit protein uS3|Halobacterium salinarum (strain

Query: 4 VIGQGGK 10
VIG+GGK
Sbjct: 54 VIGKGGK 60


>sp|G3P_HALSA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 700922

Query: 2 TPVIGQGGK 10
TP I QGG+
Sbjct: 103 TPAIYQGGE 111


>sp|G3P_HALS3|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Halobacterium salinarum (strain ATCC 29341

Query: 2 TPVIGQGGK 10
TP I QGG+
Sbjct: 103 TPAIYQGGE 111


>sp|G3P_HALMA|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Haloarcula marismortui (strain ATCC 43049

Query: 2 TPVIGQGGK 10
TP I QGG+
Sbjct: 101 TPAIFQGGE 109


>sp|RS3_HALWD|SMALL ribosomal subunit protein uS3|Haloquadratum walsbyi (strain DSM

Query: 4 VIGQGGK 10
VIG+GGK
Sbjct: 54 VIGKGGK 60


>sp|G3P_PYRIL|GLYCERALDEHYDE-3-PHOSPHATE dehydrogenase|Pyrobaculum islandicum (strain DSM 4184

Query: 3 PVIGQGGK 10
PVI QGG+
Sbjct: 104 PVIFQGGE 111




74|Sequence|366|375|GQGGKIRHFV

>sp|PUR7_ARCFU|PUTATIVE phosphoribosylaminoimidazole-succinocarboxamide

Query: 2 QGGKIRHF 9
+GGK+R F
Sbjct: 72 EGGKVRRF 79


>sp|VHTC_METMA|F420 non-reducing hydrogenase II cytochrome|Methanosarcina mazei

Query: 1 GQGGKIRHFV 10
G GKI HFV
Sbjct: 81 GLMGKISHFV 90


>sp|OFOB_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Saccharolobus solfataricus

Query: 1 GQGGKIRHFV 10
G GKI HF+
Sbjct: 45 GCSGKIPHFI 54


>sp|PCNA1_PYRAE|DNA polymerase sliding clamp 1|Pyrobaculum aerophilum (strain ATCC

Query: 3 GGKIRHFV 10
GGKI +F+
Sbjct: 237 GGKISYFI 244


>sp|Y133_METJA|UNCHARACTERIZED protein MJ0133|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 GQGGKIRHF 9
G+GG+ RH
Sbjct: 219 GKGGERRHL 227


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 GQGGKIRHF 9
G GK+ HF
Sbjct: 202 GGAGKMEHF 210


>sp|LADH_META3|LACTALDEHYDE dehydrogenase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 GQGGKI 6
GQGGK+
Sbjct: 334 GQGGKL 339


>sp|OFOB_SULSP|2-OXOACID:FERREDOXIN oxidoreductase subunit beta|Sulfolobus sp

Query: 1 GQGGKIRHF 9
G GKI HF
Sbjct: 45 GCSGKIPHF 53


>sp|OFOB1_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 1, subunit beta|Sulfurisphaera tokodaii (strain

Query: 1 GQGGKIRHF 9
G GKI HF
Sbjct: 45 GCSGKIPHF 53


>sp|PRIS_METBU|DNA primase small subunit PriS|Methanococcoides burtonii (strain DSM

Query: 1 GQGGKIRH 8
G GG+I H
Sbjct: 211 GWGGRINH 218


>sp|HIS6_SULTO|IMIDAZOLE glycerol phosphate synthase subunit|Sulfurisphaera tokodaii (strain

Query: 1 GQGGKIRHF 9
G GK+ HF
Sbjct: 202 GGAGKMEHF 210


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain

Query: 1 GQGGKIRHFV 10
G GKI HF+
Sbjct: 45 GCSGKIPHFM 54


>sp|RS3_METB6|SMALL ribosomal subunit protein uS3|Methanoregula boonei (strain DSM

Query: 1 GQGGKIRH 8
G+GGK+ H
Sbjct: 56 GKGGKLVH 63




75|Sequence|371|380|IRHFVSLKKL

>sp|SYY_NATPD|TYROSINE--TRNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 IRHFVSLKKL 10
I HF +++KL
Sbjct: 47 IGHFTTMRKL 56


>sp|SYY_HALMA|TYROSINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 1 IRHFVSLKKL 10
I HF +++KL
Sbjct: 46 IGHFTTMRKL 55


>sp|BE_THEKO|1,4-ALPHA-GLUCAN branching enzyme TK1436|Thermococcus kodakarensis (strain ATCC

Query: 2 RHFVSL 7
RHFVSL
Sbjct: 326 RHFVSL 331




76|Sequence|376|385|SLKKLCCTTD

>sp|RPIA_THEVO|RIBOSE-5-PHOSPHATE isomerase A|Thermoplasma volcanium (strain ATCC 51530

Query: 1 SLKKLCCTTD 10
+L+K+C +TD
Sbjct: 150 NLRKICPSTD 159


>sp|AMTAB_METJA|PROBABLE threonylcarbamoyladenosine tRNA

Query: 2 LKKLCCTTD 10
+K LC TTD
Sbjct: 293 IKNLCFTTD 301




77|Sequence|381|390|CCTTDNNKQI

>sp|EF2_METTH|ELONGATION factor 2|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 CTTDNNKQI 10
CT DN K++
Sbjct: 230 CTEDNQKEL 238


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 2 CTTDNNKQI 10
C TDN+K I
Sbjct: 543 CETDNDKII 551


>sp|SYE_METLZ|GLUTAMATE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CTTDNNK 8
CT DNN+
Sbjct: 196 CTCDNNE 202


>sp|CH60_METAC|CHAPERONIN GroEL|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 TTDNNKQI 10
T DNNK I
Sbjct: 323 TVDNNKTI 330


>sp|GATB_HALWD|ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) amidotransferase subunit B|Haloquadratum walsbyi (strain DSM

Query: 1 CCTTDNNKQ 9
C T DNN +
Sbjct: 33 CSTRDNNAE 41


>sp|HLY_HALMT|HALOLYSIN mediterranei (strain ATCC 33500

Query: 3 TTDNNKQI 10
TTDNN+ I
Sbjct: 204 TTDNNEGI 211


>sp|RS24_THEAC|SMALL ribosomal subunit protein eS24|Thermoplasma acidophilum (strain

Query: 5 DNNKQI 10
DNNKQ+
Sbjct: 54 DNNKQL 59


>sp|AATA1_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 CTTDNNKQI 10
CT DN +I
Sbjct: 176 CTLDNGAEI 184


>sp|AROK_THEAC|SHIKIMATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 2 CTTDNNK 8
C TDN K
Sbjct: 133 CLTDNRK 139


>sp|BIOW_META3|6-CARBOXYHEXANOATE--COA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 CCTTDNN 7
CT+DNN
Sbjct: 177 LCTSDNN 183




78|Sequence|386|395|NNKQIHKIHR

>sp|LYSY_PYRAB|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 KQIHKIH 9
K++HK+H
Sbjct: 40 KKVHKVH 46


>sp|LYSY_PYRHO|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 KQIHKIH 9
K++HK+H
Sbjct: 40 KKVHKVH 46


>sp|CCA_METMA|CCA-ADDING enzyme|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NNKQIHKIHR 10
N K ++++HR
Sbjct: 391 NGKYVYEVHR 400


>sp|LYSY_PYRFU|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 3 KQIHKIH 9
K++HK+H
Sbjct: 40 KKVHKVH 46


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NNKQIHKI 8
NNK +H I
Sbjct: 93 NNKDVHGI 100


>sp|HCP_METJA|HYDROXYLAMINE reductase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NNKQIHK 7
NN+ IHK
Sbjct: 162 NNEDIHK 168




79|Sequence|391|400|HKIHRDSGDN

>sp|ICMT_METAC|PROTEIN-S-ISOPRENYLCYSTEINE O-methyltransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 KIHRDSGDN 10
KIH+D G+N
Sbjct: 94 KIHKDLGNN 102


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KIHRDSGD 9
KIHRD D
Sbjct: 281 KIHRDGDD 288


>sp|BACS1_HALMA|SENSORY rhodopsin I|Haloarcula marismortui (strain ATCC 43049

Query: 2 KIHRDSGD 9
K+ RDSGD
Sbjct: 222 KLLRDSGD 229


>sp|RNH2_METAR|RIBONUCLEASE HII|Methanocella arvoryzae (strain DSM 22066

Query: 2 KIHRDS 7
K+HRDS
Sbjct: 155 KVHRDS 160


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 HKIHRDSG 8
H+I RD G
Sbjct: 447 HRIERDKG 454


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 1 HKIHRDSG 8
H+I RD G
Sbjct: 447 HRIERDKG 454


>sp|QUEC_METHJ|7-CYANO-7-DEAZAGUANINE synthase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 KIHRDSGD 9
K H D+GD
Sbjct: 82 KAHEDAGD 89


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 2 KIHRDSGDN 10
++HRD G +
Sbjct: 302 RVHRDGGSS 310


>sp|LEU3_METTH|3-ISOPROPYLMALATE dehydrogenase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 IHRDSGD 9
IH D+GD
Sbjct: 36 IHADAGD 42


>sp|CFBD_METJA|NI-SIROHYDROCHLORIN a,c-diamide reductive cyclase complex,|Methanocaldococcus

Query: 2 KIHRDSGDN 10
++H SGDN
Sbjct: 118 EVHSGSGDN 126


>sp|TAW22_PYRAB|TRNA (guanine(37)-N(1))/4-demethylwyosine(37)-methyltransferase

Query: 1 HKIHRDSG 8
H IH+++G
Sbjct: 147 HTIHKENG 154




80|Sequence|396|405|DSGDNSQTEP

>sp|RS9_DESA1|SMALL ribosomal subunit protein uS9|Desulfurococcus amylolyticus (strain

Query: 2 SGDNSQTEP 10
SGD QTEP
Sbjct: 115 SGDPRQTEP 123


>sp|PUS10_ARCFU|TRNA pseudouridine synthase Pus10|Archaeoglobus fulgidus (strain ATCC

Query: 2 SGDNSQTEP 10
SGDN +T P
Sbjct: 328 SGDNGRTRP 336


>sp|PUS10_METST|TRNA pseudouridine synthase Pus10|Methanosphaera stadtmanae (strain ATCC

Query: 2 SGDNSQTEP 10
SGDN++T+P
Sbjct: 375 SGDNNRTKP 383


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 2 SGDNSQTEP 10
SGD+ +TEP
Sbjct: 370 SGDSGRTEP 378


>sp|COX1_HALSA|CYTOCHROME c oxidase polypeptide 1|Halobacterium salinarum (strain ATCC 700922

Query: 1 DSGDNSQTE 9
D GD +Q+E
Sbjct: 567 DGGDEAQSE 575


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 3 GDNSQTEP 10
GDN +T P
Sbjct: 412 GDNGRTTP 419


>sp|RS9_THEKO|SMALL ribosomal subunit protein uS9|Thermococcus kodakarensis (strain

Query: 3 GDNSQTEP 10
GD+ +TEP
Sbjct: 109 GDSRRTEP 116


>sp|PUS10_METJA|TRNA pseudouridine synthase Pus10|Methanocaldococcus jannaschii (strain

Query: 2 SGDNSQTEP 10
SGD+ +T P
Sbjct: 417 SGDDGRTNP 425


>sp|PUS10_KORCO|TRNA pseudouridine synthase Pus10|Korarchaeum cryptofilum (strain OPF8)

Query: 2 SGDNSQTEP 10
SGD+ +T P
Sbjct: 342 SGDDGRTSP 350


>sp|RS9_THESM|SMALL ribosomal subunit protein uS9|Thermococcus sibiricus (strain DSM

Query: 3 GDNSQTEP 10
GD+ +TEP
Sbjct: 117 GDSRRTEP 124




81|Sequence|401|410|SQTEPHSFRY

>sp|GCH3_PYRNV|GTP cyclohydrolase III|Pyrobaculum neutrophilum (strain DSM 2338

Query: 5 PHSFRY 10
PH FRY
Sbjct: 49 PHHFRY 54


>sp|GCH3_PYRIL|GTP cyclohydrolase III|Pyrobaculum islandicum (strain DSM 4184

Query: 5 PHSFRY 10
PH FRY
Sbjct: 49 PHHFRY 54


>sp|GCH3_PYRAR|GTP cyclohydrolase III|Pyrobaculum arsenaticum (strain DSM 13514

Query: 5 PHSFRY 10
PH FRY
Sbjct: 49 PHHFRY 54


>sp|TRPC_HALSA|INDOLE-3-GLYCEROL phosphate synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 TEPHSF 8
TEPH F
Sbjct: 88 TEPHHF 93


>sp|RS4E_PYRAR|SMALL ribosomal subunit protein eS4|Pyrobaculum arsenaticum (strain DSM

Query: 5 PHSFRY 10
PHSF Y
Sbjct: 31 PHSFAY 36


>sp|TRM1_METHJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanospirillum hungatei

Query: 2 QTEPHSF 8
QT PHS+
Sbjct: 50 QTHPHSY 56


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 QTEPHSFRY 10
+TEP +F Y
Sbjct: 129 KTEPGAFNY 137




82|Sequence|406|415|HSFRYKNRRK

>sp|RL10_PYRAE|LARGE ribosomal subunit protein uL10|Pyrobaculum aerophilum (strain

Query: 1 HSFRYKNRR 9
H +RY+ RR
Sbjct: 51 HEYRYRLRR 59


>sp|SYV_PYRAE|VALINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 FRYKNRR 9
+RYKNRR
Sbjct: 741 WRYKNRR 747


>sp|RL21_PYRFU|LARGE ribosomal subunit protein eL21|Pyrococcus furiosus (strain ATCC

Query: 1 HSFRYKNRRK 10
HSFR K R+K
Sbjct: 6 HSFRRKTRKK 15


>sp|Y1815_PYRHO|PUTATIVE ABC transporter ATP-binding protein|Pyrococcus horikoshii (strain

Query: 2 SFRYKNRRK 10
SFRY N R+
Sbjct: 10 SFRYGNSRE 18


>sp|RL21_PYRIL|LARGE ribosomal subunit protein eL21|Pyrobaculum islandicum (strain DSM

Query: 1 HSFRYKNRR 9
H +RYK+R+
Sbjct: 6 HGYRYKSRK 14


>sp|SYT_METM7|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 HSFRYKNR 8
+SFRY+ R
Sbjct: 318 YSFRYEQR 325


>sp|SYT_METM5|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 HSFRYKNR 8
+SFRY+ R
Sbjct: 318 YSFRYEQR 325


>sp|SYT_METM6|THREONINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 HSFRYKNR 8
+SFRY+ R
Sbjct: 318 YSFRYEQR 325


>sp|SYT_METVS|THREONINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 HSFRYKNR 8
+SFRY+ R
Sbjct: 318 YSFRYEQR 325


>sp|SYT_METMP|THREONINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 HSFRYKNR 8
+SFRY+ R
Sbjct: 318 YSFRYEQR 325




83|Sequence|411|420|KNRRKESIDV

>sp|ENDA_METBU|TRNA-SPLICING endonuclease|Methanococcoides burtonii (strain DSM 6242

Query: 2 NRRKESIDV 10
NR+ ES+DV
Sbjct: 235 NRQDESMDV 243


>sp|IF2A_STAMF|TRANSLATION initiation factor 2 subunit|Staphylothermus marinus (strain ATCC

Query: 2 NRRKESIDV 10
NRR++++DV
Sbjct: 72 NRRRKTVDV 80


>sp|RAD50_SULAC|DNA double-strand break repair Rad50|Sulfolobus acidocaldarius (strain

Query: 3 RRKESIDV 10
RRKE IDV
Sbjct: 833 RRKELIDV 840


>sp|Y243_ARCFU|UNCHARACTERIZED protein AF_0243|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KNRRKESID 9
KNR +E+ID
Sbjct: 402 KNRVRENID 410


>sp|KAE1B_METM7|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 2 NRRKESIDV 10
NR KE +DV
Sbjct: 263 NRLKEMLDV 271


>sp|IF2A_HYPBU|TRANSLATION initiation factor 2 subunit|Hyperthermus butylicus (strain DSM

Query: 2 NRRKESIDV 10
N+RK+ +DV
Sbjct: 72 NKRKKQVDV 80




84|Sequence|416|425|ESIDVKSISS

>sp|MTD_METST|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Methanosphaera

Query: 1 ESIDVKSISS 10
E IDV++ISS
Sbjct: 30 EDIDVRTISS 39


>sp|Y1127_METTP|PUTATIVE nickel insertion protein|Methanothrix thermoacetophila (strain DSM

Query: 1 ESIDVKSISS 10
ES+DVK I S
Sbjct: 132 ESLDVKRILS 141


>sp|SYFA_METTH|PHENYLALANINE--TRNA ligase alpha subunit|Methanothermobacter thermautotrophicus

Query: 1 ESIDVKSISS 10
+ ID+KS+ S
Sbjct: 38 QKIDIKSVMS 47




85|Sequence|421|430|KSISSRGSDA

***** No hits found ******


86|Sequence|426|435|RGSDAPSLQN

>sp|RFCS_METJA|REPLICATION factor C small subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 1 RGSDAPSLQN 10
RG PSL+N
Sbjct: 461 RGKRKPSLKN 470


>sp|TSGBD_HALVD|GLUCOSE ABC transporter permease protein|Haloferax volcanii (strain ATCC

Query: 1 RGSDAPS 7
RG+DAP+
Sbjct: 365 RGNDAPA 371


>sp|AATA3_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 RGSDAPSL 8
RGS AP+L
Sbjct: 106 RGSSAPAL 113


>sp|Y3534_METJA|UNCHARACTERIZED protein MJECL34|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 DAPSLQ 9
DAPSLQ
Sbjct: 47 DAPSLQ 52


>sp|PURL_PYRIL|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum islandicum (strain DSM 4184

Query: 1 RGSDAPSLQ 9
RG+DAP ++
Sbjct: 58 RGTDAPLVE 66


>sp|PURL_PYRNV|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 RGSDAPSLQ 9
RG+DAP ++
Sbjct: 58 RGTDAPLVE 66




87|Sequence|431|440|PSLQNRRYPS

>sp|NFI_HALSA|ENDONUCLEASE V|Halobacterium salinarum (strain ATCC 700922

Query: 2 SLQNRRYPS 10
+LQ+R+YP+
Sbjct: 206 ALQSRQYPT 214


>sp|AGL7_HALVD|LOW-SALT glycan biosynthesis sulfotransferase Agl7|Haloferax volcanii

Query: 1 PSLQNRRYPS 10
PSL + +YPS
Sbjct: 56 PSLMSGKYPS 65


>sp|RL39_METPE|LARGE ribosomal subunit protein eL39|Methanosphaerula palustris (strain

Query: 4 QNRRYPS 10
QNRR PS
Sbjct: 18 QNRRVPS 24


>sp|RPO2_SACSH|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus shibatae (strain ATCC

Query: 1 PSLQNRRYPS 10
P +QN +PS
Sbjct: 246 PEIQNELFPS 255


>sp|RPO2_SACS2|DNA-DIRECTED RNA polymerase subunit Rpo2|Saccharolobus solfataricus (strain ATCC

Query: 1 PSLQNRRYPS 10
P +QN +PS
Sbjct: 246 PEVQNELFPS 255




88|Sequence|436|445|RRYPSMARIH

>sp|MIG_PYRAE|THYMINE/URACIL-DNA glycosylase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 RRYPSMARI 9
RRYPS AR+
Sbjct: 66 RRYPSPARL 74


>sp|DNAG_METTP|DNA primase DnaG|Methanothrix thermoacetophila (strain DSM 6194

Query: 4 PSMARIH 10
P MARIH
Sbjct: 97 PCMARIH 103


>sp|PELO_ARCFU|PROTEIN pelota homolog|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 RYPSMAR 8
RYP MA+
Sbjct: 207 RYPEMAK 213


>sp|ATGT_AERPE|TRNA-GUANINE(15) transglycosylase|Aeropyrum pernix (strain ATCC 700893

Query: 1 RRYPSMARI 9
R++PS AR+
Sbjct: 330 RKHPSTARV 338




89|Sequence|441|450|MARIHSMTIE

>sp|SYE_PYRAR|GLUTAMATE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 2 ARIHSMTIE 10
R+HS+T+E
Sbjct: 491 GRLHSLTLE 499


>sp|TRM1_ARCFU|TRNA (guanine(26)-N(2))-dimethyltransferase|Archaeoglobus fulgidus

Query: 1 MARIHSMTI 9
+A+IHS+T+
Sbjct: 295 LAKIHSLTL 303


>sp|MFNA_NATPD|PROBABLE L-aspartate decarboxylase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 ARIHSMTIE 10
A IH+MTI+
Sbjct: 194 ADIHTMTID 202


>sp|SYE_HYPBU|GLUTAMATE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 2 ARIHSMTIE 10
AR HS+T++
Sbjct: 488 ARYHSLTVD 496




90|Sequence|446|455|SMTIEAPITK

>sp|ACDA_METTH|ACETYL-COA decarbonylase/synthase complex subunit alpha|Methanothermobacter

Query: 1 SMTIEAPITK 10
++ IEAPIT+
Sbjct: 142 NVDIEAPITR 151


>sp|SECY_SACS2|PROTEIN translocase subunit SecY|Saccharolobus solfataricus (strain ATCC

Query: 1 SMTIEAPIT 9
+MTIE P+T
Sbjct: 260 TMTIEIPVT 268


>sp|DP2L_PYRAB|DNA polymerase II large subunit|Pyrococcus abyssi (strain GE5 /

Query: 3 TIEAPITK 10
TIE PI K
Sbjct: 401 TIEGPIVK 408


>sp|THIC_SACI6|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 MTIEAPITK 10
MTI A ITK
Sbjct: 159 MTIHAGITK 167


>sp|THIC_SACI2|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain L.S.2.15 /

Query: 2 MTIEAPITK 10
MTI A ITK
Sbjct: 159 MTIHAGITK 167


>sp|THIC2_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MTIEAPITK 10
MTI A ITK
Sbjct: 159 MTIHAGITK 167


>sp|THIC_SACI4|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.14.25 /

Query: 2 MTIEAPITK 10
MTI A ITK
Sbjct: 159 MTIHAGITK 167


>sp|DP2L_PYRHO|DNA polymerase II large subunit|Pyrococcus horikoshii (strain ATCC

Query: 3 TIEAPITK 10
TIE PI K
Sbjct: 398 TIEGPIVK 405


>sp|THIC_PYRAE|PHOSPHOMETHYLPYRIMIDINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 MTIEAPITK 10
MTI A +TK
Sbjct: 161 MTIHAAVTK 169


>sp|THIC_SACI3|PHOSPHOMETHYLPYRIMIDINE synthase|Saccharolobus islandicus (strain M.16.27) (Sulfolobus

Query: 2 MTIEAPITK 10
MTI A ITK
Sbjct: 159 MTIHAGITK 167


>sp|THIC1_SACS2|PHOSPHOMETHYLPYRIMIDINE synthase 1|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 MTIEAPITK 10
MTI A ITK
Sbjct: 159 MTIHAGITK 167




91|Sequence|451|460|APITKVINII

>sp|TOP6B_METJA|TYPE 2 DNA topoisomerase 6|Methanocaldococcus jannaschii (strain ATCC

Query: 1 APITKVINII 10
APIT +N+I
Sbjct: 561 APITVFVNLI 570


>sp|Y1143_METST|PUTATIVE HTH-type transcriptional regulatory protein|Methanosphaera

Query: 1 APITKVINII 10
+PIT+ IN++
Sbjct: 184 SPITESINLL 193




92|Sequence|456|465|VINIINAAQE

***** No hits found ******


93|Sequence|461|470|NAAQENSPVT

>sp|DHYS_THEAC|PROBABLE deoxyhypusine synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 NAAQENSPV 9
NAA+ N PV
Sbjct: 178 NAAKNNIPV 186


>sp|CDC6H_HALMA|ORC1-TYPE DNA replication protein 8|Haloarcula marismortui (strain ATCC 43049

Query: 3 AQENSPVT 10
A EN+P+T
Sbjct: 174 ANENTPIT 181




94|Sequence|466|475|NSPVTVAEAL

>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 1 NSPVTVAEAL 10
NSPVT+ + L
Sbjct: 98 NSPVTIVQVL 107


>sp|COMB_THEAC|PROBABLE 2-phosphosulfolactate phosphatase|Thermoplasma acidophilum

Query: 1 NSPVTVAEA 9
NSP +AEA
Sbjct: 77 NSPAEIAEA 85


>sp|MFNB_ARCFU|(5-FORMYLFURAN-3-YL)METHYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 SPVTVAEAL 10
SP++VAEA+
Sbjct: 6 SPMSVAEAI 14


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 NSPVTVA 7
N PVTVA
Sbjct: 650 NDPVTVA 656




95|Sequence|471|480|VAEALDRVLE

>sp|KAD6_METKA|PUTATIVE adenylate kinase|Methanopyrus kandleri (strain AV19 /

Query: 2 AEALDRVLE 10
AEA DRVLE
Sbjct: 153 AEAADRVLE 161


>sp|KAD_METTP|ADENYLATE kinase|Methanothrix thermoacetophila (strain DSM 6194

Query: 2 AEALDRVL 9
AEALD++L
Sbjct: 93 AEALDKIL 100


>sp|RL3_METM6|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C6

Query: 2 AEALDRVLE 10
A+ALD VLE
Sbjct: 125 ADALDAVLE 133


>sp|RL3_METM7|LARGE ribosomal subunit protein uL3|Methanococcus maripaludis (strain C7

Query: 2 AEALDRVLE 10
A+ALD VLE
Sbjct: 125 ADALDAVLE 133


>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 1 VAEALDRVLE 10
VAEA+DR+++
Sbjct: 382 VAEAVDRIIQ 391


>sp|Y417_METJA|UNCHARACTERIZED protein MJ0417|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 EALDRVLE 10
EALDRV E
Sbjct: 77 EALDRVRE 84


>sp|MTD_ARCFU|F420-DEPENDENT methylenetetrahydromethanopterin dehydrogenase|Archaeoglobus

Query: 1 VAEALDRVLE 10
V EA+D+V+E
Sbjct: 149 VQEAIDKVIE 158


>sp|PHAE_HALMA|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula marismortui (strain ATCC 43049

Query: 1 VAEALDRVLE 10
V + LDRVLE
Sbjct: 168 VEQKLDRVLE 177


>sp|PHAE_HALHT|POLY(3-HYDROXYALKANOATE) polymerase subunit PhaE|Haloarcula hispanica (strain ATCC 33960

Query: 1 VAEALDRVLE 10
V + LDRVLE
Sbjct: 168 VEQKLDRVLE 177


>sp|SIHH_METMA|S-INOSYL-L-HOMOCYSTEINE hydrolase|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 EALDRVLE 10
EA+DRVL+
Sbjct: 105 EAIDRVLD 112


>sp|CH60_METHJ|CHAPERONIN GroEL|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 VAEALDRV 8
++EA+DRV
Sbjct: 161 ISEAMDRV 168


>sp|Y2058_ARCFU|UNCHARACTERIZED protein AF_2058|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VAEALDRVL 9
+AE LDRV+
Sbjct: 87 IAEQLDRVV 95


>sp|AATE_CENSY|A-TYPE ATP synthase subunit E|Cenarchaeum symbiosum (strain A)

Query: 4 ALDRVLE 10
A+DRVLE
Sbjct: 85 AIDRVLE 91


>sp|ADEC_METBF|ADENINE deaminase|Methanosarcina barkeri (strain Fusaro /

Query: 2 AEALDRVL 9
AEA+DR+L
Sbjct: 127 AEAVDRLL 134


>sp|ADEC_METAC|ADENINE deaminase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 AEALDRVL 9
AEA+DR+L
Sbjct: 127 AEAVDRLL 134




96|Sequence|476|485|DRVLEILRTT

>sp|DPO4_METAC|DNA polymerase IV|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DRVLEILRT 9
DR++EILR+
Sbjct: 89 DRIMEILRS 97


>sp|DPO41_METMA|DNA polymerase IV 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DRVLEILRT 9
DR++EILR+
Sbjct: 89 DRIMEILRS 97


>sp|CDC6D_HALMA|ORC1-TYPE DNA replication protein 4|Haloarcula marismortui (strain ATCC 43049

Query: 1 DRVLEILRT 9
DRV+E++RT
Sbjct: 403 DRVVEVVRT 411


>sp|CDC67_HALSA|ORC1-TYPE DNA replication protein 7|Halobacterium salinarum (strain ATCC

Query: 1 DRVLEILRT 9
DRV+E++RT
Sbjct: 396 DRVVEVVRT 404


>sp|CDC61_METMA|ORC1-TYPE DNA replication protein 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 DRVLEILRT 9
DRV+E++RT
Sbjct: 291 DRVVEVVRT 299


>sp|CDC61_METAC|ORC1-TYPE DNA replication protein 1|Methanosarcina acetivorans (strain ATCC

Query: 1 DRVLEILRT 9
DRV+E++RT
Sbjct: 291 DRVVEVVRT 299


>sp|EI2BL_PYRHO|PUTATIVE translation initiation factor eIF-2B|Pyrococcus horikoshii

Query: 1 DRVLEILR 8
+RVLEILR
Sbjct: 4 ERVLEILR 11


>sp|EI2BL_PYRAB|PUTATIVE translation initiation factor eIF-2B|Pyrococcus abyssi (strain

Query: 1 DRVLEIL 7
DRVLEIL
Sbjct: 4 DRVLEIL 10


>sp|MEND_HALLT|2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE synthase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 1 DRVLEILRTT 10
DR L LRTT
Sbjct: 143 DRALRSLRTT 152


>sp|Y620_METKA|UPF0425 pyridoxal phosphate-dependent protein MK0620|Methanopyrus

Query: 1 DRVLEILR 8
DR LEI+R
Sbjct: 19 DRALEIIR 26


>sp|CDC61_AERPE|ORC1-TYPE DNA replication protein 1|Aeropyrum pernix (strain ATCC 700893

Query: 1 DRVLEILRT 9
DRV E++RT
Sbjct: 287 DRVSEVVRT 295


>sp|TRM10_SULAC|TRNA (adenine(9)-N1)-methyltransferase|Sulfolobus acidocaldarius (strain

Query: 1 DRVLEILRT 9
D+V+EI+R+
Sbjct: 279 DKVIEIVRS 287


>sp|HELS_METJA|ATP-DEPENDENT DNA helicase Hel308|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DRVLEILR 8
D++LEIL+
Sbjct: 2 DKILEILK 9


>sp|AROD_METKA|3-DEHYDROQUINATE dehydratase|Methanopyrus kandleri (strain AV19 /

Query: 2 RVLEILRTT 10
R+LE++RT
Sbjct: 153 RILEVVRTA 161




97|Sequence|481|490|ILRTTELYSP

>sp|DNAG_THEVO|DNA primase DnaG|Thermoplasma volcanium (strain ATCC 51530

Query: 2 LRTTELY 8
L+TTE+Y
Sbjct: 364 LKTTEIY 370




98|Sequence|486|495|ELYSPQLGTK

>sp|Y3538_METJA|UNCHARACTERIZED protein MJECL38|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ELYSPQL 7
ELY+PQL
Sbjct: 102 ELYAPQL 108


>sp|TRPF_ARCFU|N-(5'-PHOSPHORIBOSYL)ANTHRANILATE isomerase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 ELYSPQL 7
ELYSP L
Sbjct: 114 ELYSPHL 120


>sp|THSB_SULTO|CHAPERONIN subunit beta|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 YSPQLGTK 10
Y+PQ+G K
Sbjct: 432 YAPQIGGK 439


>sp|RS9_METMA|SMALL ribosomal subunit protein uS9|Methanosarcina mazei (strain ATCC

Query: 1 ELYSPQLG 8
ELY+P+L
Sbjct: 35 ELYTPELA 42


>sp|RS9_METAC|SMALL ribosomal subunit protein uS9|Methanosarcina acetivorans (strain

Query: 1 ELYSPQLG 8
ELY+P+L
Sbjct: 35 ELYTPELA 42


>sp|THSB_SULAC|CHAPERONIN subunit beta|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 YSPQLGTK 10
Y+PQ+G K
Sbjct: 432 YAPQVGGK 439


>sp|SYH_METTH|HISTIDINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 ELYSPQLGTK 10
E+Y P+LG +
Sbjct: 278 EIYVPELGAQ 287


>sp|THSB_SACSH|CHAPERONIN subunit beta|Saccharolobus shibatae (strain ATCC 51178

Query: 3 YSPQLGTK 10
Y+PQ+G K
Sbjct: 431 YAPQVGGK 438


>sp|Y886_HYPBU|UPF0173 metal-dependent hydrolase Hbut_0886|Hyperthermus butylicus (strain

Query: 1 ELYSPQLG 8
ELYSP++
Sbjct: 153 ELYSPKIA 160


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 3 YSPQLGTK 10
Y+PQ+G K
Sbjct: 431 YAPQVGGK 438


>sp|PYRG_HALSA|CTP synthase|Halobacterium salinarum (strain ATCC 700922

Query: 3 YSPQLGTK 10
Y P LG+K
Sbjct: 7 YDPSLGSK 14


>sp|PYRG_HALS3|CTP synthase|Halobacterium salinarum (strain ATCC 29341

Query: 3 YSPQLGTK 10
Y P LG+K
Sbjct: 7 YDPSLGSK 14


>sp|PFDA_METHJ|PREFOLDIN subunit alpha|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 ELYSPQLG 8
E+YS QLG
Sbjct: 25 EVYSRQLG 32


>sp|RLSX_METTH|FUSED uL13/uS9 ribosomal subunit protein|Methanothermobacter

Query: 1 ELYSPQLG 8
ELY+P+L
Sbjct: 184 ELYTPELA 191


>sp|PYRG_HALHT|CTP synthase|Haloarcula hispanica (strain ATCC 33960

Query: 3 YSPQLGTK 10
Y P+LG K
Sbjct: 9 YDPELGRK 16


>sp|PYRG_HALMA|CTP synthase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YSPQLGTK 10
Y P+LG K
Sbjct: 9 YDPELGRK 16




99|Sequence|491|500|QLGTKDEDPH

>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 2 LGTKDEDP 9
L KDEDP
Sbjct: 398 LSVKDEDP 405


>sp|RS2_PICTO|SMALL ribosomal subunit protein uS2|Picrophilus torridus (strain ATCC

Query: 1 QLGTKDEDPH 10
Q+ +KD DP+
Sbjct: 23 QIKSKDMDPY 32


>sp|FLPA_METBF|FIBRILLARIN-LIKE rRNA/tRNA 2'-O-methyltransferase|Methanosarcina barkeri (strain

Query: 1 QLGTKDEDP 9
QL TK+ DP
Sbjct: 20 QLATKNLDP 28


>sp|SYL_METBU|LEUCINE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 QLGTKDED 8
Q G KD+D
Sbjct: 370 QFGVKDQD 377




100|Sequence|496|505|DEDPHTSDLV

>sp|RTCA_PYRNV|RNA 3'-terminal phosphate cyclase|Pyrobaculum neutrophilum (strain DSM

Query: 3 DPHTSDLV 10
DPH +D+V
Sbjct: 284 DPHMADMV 291


>sp|HIS8_METMJ|HISTIDINOL-PHOSPHATE aminotransferase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 DEDPHTSD 8
D DPHT D
Sbjct: 298 DVDPHTGD 305


>sp|UVRC_METAC|UVRABC system protein C|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 DEDPHTSDLV 10
D DP T+ LV
Sbjct: 44 DHDPKTTSLV 53


>sp|GLMS_METKA|GLUTAMINE--FRUCTOSE-6-PHOSPHATE aminotransferase [isomerizing]|Methanopyrus kandleri (strain AV19 /

Query: 1 DEDPHT 6
+EDPHT
Sbjct: 246 EEDPHT 251


>sp|HELS_METTH|ATP-DEPENDENT DNA helicase Hel308|Methanothermobacter thermautotrophicus (strain

Query: 2 EDPHTSDL 9
+DP TSD+
Sbjct: 98 KDPRTSDI 105


>sp|TRM1_METPE|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanosphaerula palustris

Query: 1 DEDPHTSDLV 10
D DP +DL+
Sbjct: 82 DRDPAAADLI 91


>sp|ADEC_METS3|ADENINE deaminase|Methanobrevibacter smithii (strain ATCC 35061

Query: 2 EDPHTSDLV 10
+D HT+DL+
Sbjct: 272 DDKHTTDLI 280




101|Sequence|501|510|TSDLVGGLMT

>sp|ILVC_SULAC|KETOL-ACID reductoisomerase (NADP(+))|Sulfolobus acidocaldarius (strain ATCC

Query: 3 DLVGGLM 9
DLVGG+M
Sbjct: 198 DLVGGVM 204


>sp|DNAG_ARCFU|DNA primase DnaG|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 TSDLVGGLMT 10
+SD+ GG++T
Sbjct: 2 SSDMEGGMIT 11


>sp|GGPS_SACS2|GERANYLGERANYL diphosphate synthase|Saccharolobus solfataricus (strain ATCC

Query: 1 TSDLVGG 7
+SDL+GG
Sbjct: 55 SSDLIGG 61




102|Sequence|506|515|GGLMTDGLRR

>sp|CSG_METSC|CELL surface glycoprotein|Methanothermus sociabilis

Query: 1 GGLMTDGL 8
GGL TDG+
Sbjct: 263 GGLFTDGM 270


>sp|CSG_METFV|CELL surface glycoprotein|Methanothermus fervidus (strain ATCC 43054

Query: 1 GGLMTDGL 8
GGL TDG+
Sbjct: 263 GGLFTDGM 270


>sp|MCRZ_METJA|METHYL-COENZYME M reductase II subunit|Methanocaldococcus jannaschii (strain ATCC

Query: 2 GLMTDGLRR 10
GLM DGL+R
Sbjct: 170 GLMFDGLQR 178


>sp|DAPA_METTP|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 GGLMTDGLRR 10
G L DGLRR
Sbjct: 17 GSLDEDGLRR 26


>sp|RS4E_METM7|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 GGLMTDGLRR 10
G ++ DGL+R
Sbjct: 69 GKILIDGLKR 78


>sp|RS4E_METM6|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 GGLMTDGLRR 10
G ++ DGL+R
Sbjct: 69 GKILIDGLKR 78


>sp|RS4E_METM5|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 GGLMTDGLRR 10
G ++ DGL+R
Sbjct: 69 GKILIDGLKR 78


>sp|RS4E_METMP|SMALL ribosomal subunit protein eS4|Methanococcus maripaludis (strain

Query: 1 GGLMTDGLRR 10
G ++ DGL+R
Sbjct: 69 GKILIDGLKR 78


>sp|Y1695_PYRFU|UNCHARACTERIZED lipoprotein PF1695|Pyrococcus furiosus (strain ATCC 43587

Query: 1 GGLMTDGLR 9
GG+MT GL+
Sbjct: 295 GGIMTLGLK 303




103|Sequence|511|520|DGLRRLSGNE

>sp|PURP_SULAC|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfolobus acidocaldarius (strain ATCC

Query: 1 DGLRRLSGN 9
DGLRRL N
Sbjct: 211 DGLRRLPEN 219


>sp|RIO1_THEAC|RIO-TYPE serine/threonine-protein kinase Rio1|Thermoplasma acidophilum

Query: 1 DGLRRLSGN 9
DG+RR+ N
Sbjct: 110 DGMRRMYAN 118


>sp|PURP_SULTO|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Sulfurisphaera tokodaii (strain DSM

Query: 1 DGLRRLSGN 9
DGLRRL +
Sbjct: 210 DGLRRLPAD 218


>sp|PURP_SACS2|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Saccharolobus solfataricus (strain ATCC

Query: 1 DGLRRL 6
DGLRRL
Sbjct: 210 DGLRRL 215


>sp|ATGT_METST|TRNA-GUANINE(15) transglycosylase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DGLRRL 6
DGLRRL
Sbjct: 340 DGLRRL 345


>sp|Y350_METKA|UPF0248 protein MK0350|Methanopyrus kandleri (strain AV19 /

Query: 2 GLRRLSGNE 10
GLRR+ G+E
Sbjct: 24 GLRRIWGDE 32


>sp|PURP_METS5|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Metallosphaera sedula (strain ATCC

Query: 1 DGLRRLSGN 9
DGLRRL +
Sbjct: 209 DGLRRLPSD 217


>sp|Y943_METJA|UNCHARACTERIZED protein MJ0943|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 LRRLSGNE 10
LR+LSG E
Sbjct: 365 LRKLSGEE 372


>sp|SYA_THEPD|ALANINE--TRNA ligase|Thermofilum pendens (strain DSM 2475

Query: 1 DGLRRLSGNE 10
D LR+LSG E
Sbjct: 263 DRLRKLSGVE 272


>sp|NCPP_KORCO|PROBABLE inosine/xanthosine triphosphatase|Korarchaeum cryptofilum (strain

Query: 1 DGLRRLSGNE 10
D + RLSGNE
Sbjct: 121 DLMARLSGNE 130


>sp|PURP_IGNH4|5-FORMAMINOIMIDAZOLE-4-CARBOXAMIDE-1-(BETA)-D-RIBOFURANOSYL 5'-monophosphate synthetase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DGLRRL 6
DGLRRL
Sbjct: 222 DGLRRL 227


>sp|SYFB_HALSA|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 700922

Query: 1 DGLRRLSGN 9
D LRRL+G+
Sbjct: 9 DELRRLTGH 17


>sp|SYFB_HALS3|PHENYLALANINE--TRNA ligase beta subunit|Halobacterium salinarum (strain ATCC 29341

Query: 1 DGLRRLSGN 9
D LRRL+G+
Sbjct: 9 DELRRLTGH 17


>sp|GATE_AERPE|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Aeropyrum pernix (strain ATCC 700893

Query: 2 GLRRLSGNE 10
GLRRLS E
Sbjct: 572 GLRRLSREE 580




104|Sequence|516|525|LSGNEYVFTK

>sp|SYFB_PYRAB|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus abyssi (strain GE5 /

Query: 1 LSGNEYVFT 9
L+G+EY FT
Sbjct: 473 LAGSEYTFT 481


>sp|TOP6B_METTH|TYPE 2 DNA topoisomerase 6|Methanothermobacter thermautotrophicus

Query: 2 SGNEYVFTK 10
+GN YVF +
Sbjct: 214 TGNRYVFNR 222


>sp|TRUD_METBU|PROBABLE tRNA pseudouridine synthase D|Methanococcoides burtonii (strain DSM

Query: 1 LSGNEYVFT 9
L+GNE++ T
Sbjct: 131 LTGNEFIIT 139


>sp|DNLJ_NATPD|DNA ligase|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LSGNEYVFT 9
LSG +VFT
Sbjct: 612 LSGQTFVFT 620


>sp|HIS6_SACS2|IMIDAZOLE glycerol phosphate synthase subunit|Saccharolobus solfataricus

Query: 1 LSGNEYVFTK 10
+SGN VFTK
Sbjct: 134 VSGNWIVFTK 143


>sp|HCGF_METM5|IRON-GUANYLYLPYRIDINOL cofactor biosynthesis protein HcgF|Methanococcus maripaludis

Query: 4 NEYVFT 9
NEYVFT
Sbjct: 121 NEYVFT 126


>sp|ARCSA_THEKO|ARCHAEOSINE synthase subunit alpha|Thermococcus kodakarensis (strain ATCC

Query: 1 LSGNEYVFT 9
LSG E +FT
Sbjct: 392 LSGREIIFT 400


>sp|CBIH_METJA|PROBABLE cobalt-factor III C(17)-methyltransferase|Methanocaldococcus

Query: 2 SGNEYVFTK 10
SGNE FTK
Sbjct: 9 SGNERHFTK 17


>sp|TRUB_METBF|PROBABLE tRNA pseudouridine synthase B|Methanosarcina barkeri (strain Fusaro

Query: 1 LSGNEYV 7
LSG EYV
Sbjct: 101 LSGKEYV 107


>sp|TRUB_METAC|PROBABLE tRNA pseudouridine synthase B|Methanosarcina acetivorans (strain

Query: 1 LSGNEYV 7
LSG EYV
Sbjct: 101 LSGKEYV 107


>sp|TREZ_SACSO|MALTO-OLIGOSYLTREHALOSE trehalohydrolase|Saccharolobus solfataricus (Sulfolobus

Query: 1 LSGNEYVFT 9
+ GNE +FT
Sbjct: 7 IDGNEVIFT 15


>sp|Y1312_METJA|UPF0026 protein MJ1312|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 GNEYVFTK 10
GNE++F++
Sbjct: 246 GNEFIFSE 253


>sp|SYM_PYRIL|METHIONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 4 NEYVFTK 10
N Y+FTK
Sbjct: 114 NGYIFTK 120


>sp|SYM_PYRCJ|METHIONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 4 NEYVFTK 10
N Y+FTK
Sbjct: 114 NGYIFTK 120


>sp|SYM_PYRAE|METHIONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 NEYVFTK 10
N Y+FTK
Sbjct: 114 NGYIFTK 120


>sp|SYM_CALMQ|METHIONINE--TRNA ligase|Caldivirga maquilingensis (strain ATCC 700844

Query: 4 NEYVFTK 10
N Y+FTK
Sbjct: 127 NGYIFTK 133


>sp|GSA_METMA|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSGNEYV 7
L GNEY+
Sbjct: 50 LDGNEYI 56


>sp|GSA_METAC|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LSGNEYV 7
L GNEY+
Sbjct: 50 LDGNEYI 56


>sp|Y1499_SULAC|PROBABLE glycosyltransferase Saci_1499|Sulfolobus acidocaldarius (strain

Query: 2 SGNEYVFT 9
SGN YV T
Sbjct: 395 SGNTYVIT 402


>sp|Y2090_METMA|UPF0251 protein MM_2090|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LSGNEYVFT 9
+SG EYV T
Sbjct: 88 ISGGEYVNT 96


>sp|GSA_METBF|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanosarcina barkeri (strain Fusaro /

Query: 1 LSGNEYV 7
L GNEY+
Sbjct: 50 LDGNEYI 56


>sp|ASNH2_METJA|PUTATIVE asparagine synthetase [glutamine-hydrolyzing] 2|Methanocaldococcus

Query: 2 SGNEYVFT 9
GNE++F+
Sbjct: 166 DGNEFIFS 173




105|Sequence|521|530|YVFTKNVHQS

>sp|LEUD_METMA|3-ISOPROPYLMALATE dehydratase small subunit|Methanosarcina mazei (strain ATCC

Query: 3 FTKNVHQS 10
F KNVH++
Sbjct: 43 FAKNVHEN 50


>sp|KPRS_METMA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 VFTKNVHQ 9
VFT N+H+
Sbjct: 126 VFTINIHE 133


>sp|SUFS_HALVD|CYSTEINE desulfurase|Haloferax volcanii (strain ATCC 29605

Query: 2 VFTKNVHQS 10
VFTKN +S
Sbjct: 108 VFTKNTTES 116


>sp|KPRS_METAC|RIBOSE-PHOSPHATE pyrophosphokinase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 VFTKNVHQ 9
+FT N+H+
Sbjct: 114 IFTINIHE 121


>sp|CEDA2_SULAC|DNA import protein CedA2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 YVFTKNVH 8
Y++TKNV
Sbjct: 19 YIYTKNVQ 26


>sp|ARFB_META3|2-AMINO-5-FORMYLAMINO-6-RIBOSYLAMINOPYRIMIDIN-4(3H)-ONE 5'-monophosphate deformylase|Methanococcus aeolicus (strain ATCC

Query: 2 VFTKNVHQ 9
+ KNVHQ
Sbjct: 28 IINKNVHQ 35




106|Sequence|526|535|NVHQSHSHLA

>sp|PURL_METTP|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Methanothrix thermoacetophila (strain DSM

Query: 3 HQSHSH 8
H+SH+H
Sbjct: 97 HESHNH 102


>sp|ILVC_METS5|KETOL-ACID reductoisomerase (NAD(P)(+))|Metallosphaera sedula (strain ATCC

Query: 2 VHQSHS 7
VHQ+HS
Sbjct: 156 VHQNHS 161


>sp|PYRI_METST|ASPARTATE carbamoyltransferase regulatory chain|Methanosphaera stadtmanae

Query: 1 NVHQSHSHL 9
N+ +SH HL
Sbjct: 90 NIRKSHLHL 98


>sp|AMYA_PYRAB|ALPHA-AMYLASE abyssi (strain GE5 /

Query: 1 NVHQSHSHL 9
N+ ++HSHL
Sbjct: 376 NLIKAHSHL 384


>sp|LYSY_AERPE|PUTATIVE [LysW]-L-2-aminoadipate/[LysW]-L-glutamate phosphate

Query: 2 VHQSHSHL 9
VH +H HL
Sbjct: 45 VHTAHPHL 52




107|Sequence|531|540|HSHLAMPITI

>sp|TIAS_METV3|TRNA(ILE2) 2-agmatinylcytidine synthetase TiaS|Methanococcus voltae (strain

Query: 3 HLAMPITI 10
HL+MP+++
Sbjct: 492 HLSMPLSL 499


>sp|Y1178_METJA|UNCHARACTERIZED glycosyltransferase MJ1178|Methanocaldococcus jannaschii (strain

Query: 1 HSHLAMP 7
HSH A P
Sbjct: 88 HSHYAFP 94


>sp|DADD_METTP|5'-DEOXYADENOSINE deaminase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 HSHLAMPI 8
H+HLAM +
Sbjct: 57 HTHLAMTL 64


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 SHLAMPITI 10
SHL P+TI
Sbjct: 602 SHLIPPMTI 610




108|Sequence|536|545|MPITINDVPP

>sp|RL3_THEON|LARGE ribosomal subunit protein uL3|Thermococcus onnurineus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 68 MPVTVVEVPP 77


>sp|RL3_THEGJ|LARGE ribosomal subunit protein uL3|Thermococcus gammatolerans (strain

Query: 1 MPITINDVPP 10
+P+TI +VPP
Sbjct: 68 VPVTIVEVPP 77


>sp|RIFK_METB6|RIBOFLAVIN kinase|Methanoregula boonei (strain DSM 21154

Query: 1 MPITINDVP 9
MP IND+P
Sbjct: 171 MPCRINDIP 179


>sp|RL3_SACI7|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_SACI6|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_SACI4|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_SACI3|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_SACI2|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_SACI1|LARGE ribosomal subunit protein uL3|Saccharolobus islandicus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_THEKO|LARGE ribosomal subunit protein uL3|Thermococcus kodakarensis (strain

Query: 1 MPITINDVPP 10
+P+TI +VPP
Sbjct: 68 VPVTIVEVPP 77


>sp|RL3_SACS2|LARGE ribosomal subunit protein uL3|Saccharolobus solfataricus (strain

Query: 1 MPITINDVPP 10
MP+T+ +VPP
Sbjct: 73 MPVTVLEVPP 82


>sp|RL3_PYRHO|LARGE ribosomal subunit protein uL3|Pyrococcus horikoshii (strain ATCC

Query: 1 MPITINDVPP 10
MP+TI + PP
Sbjct: 68 MPVTIIETPP 77


>sp|RL3_PYRAB|LARGE ribosomal subunit protein uL3|Pyrococcus abyssi (strain GE5 /

Query: 1 MPITINDVPP 10
MP+TI + PP
Sbjct: 68 MPVTIIETPP 77


>sp|RL3_METTH|LARGE ribosomal subunit protein uL3|Methanothermobacter

Query: 2 PITINDVPP 10
P+TI +VPP
Sbjct: 70 PVTILEVPP 78


>sp|RL3_STAMF|LARGE ribosomal subunit protein uL3|Staphylothermus marinus (strain ATCC

Query: 1 MPITINDVPP 10
+P+T+ D PP
Sbjct: 91 IPVTVLDAPP 100


>sp|RL3_PYRFU|LARGE ribosomal subunit protein uL3|Pyrococcus furiosus (strain ATCC

Query: 1 MPITINDVPP 10
MP+TI + PP
Sbjct: 68 MPVTIIETPP 77


>sp|RL3_METPE|LARGE ribosomal subunit protein uL3|Methanosphaerula palustris (strain

Query: 1 MPITINDVPP 10
+P+TI ++PP
Sbjct: 70 VPVTIIEIPP 79


>sp|THSB_SACS2|CHAPERONIN subunit beta|Saccharolobus solfataricus (strain ATCC 35092

Query: 2 PITIND 7
P+TIND
Sbjct: 151 PVTIND 156


>sp|RTCB_METKA|TRNA-SPLICING ligase RtcB|Methanopyrus kandleri (strain AV19 /

Query: 1 MPITINDVPP 10
MP+ + PP
Sbjct: 947 MPVVAEEAPP 956


>sp|MRE11_ARCFU|DNA double-strand break repair protein|Archaeoglobus fulgidus (strain

Query: 3 ITINDVP 9
+TIND+P
Sbjct: 186 LTINDLP 192


>sp|RECJ1_METJA|EXONUCLEASE RecJ1|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 TINDVP 9
TIND+P
Sbjct: 62 TINDIP 67


>sp|RL3_THEVO|LARGE ribosomal subunit protein uL3|Thermoplasma volcanium (strain ATCC

Query: 1 MPITINDVPP 10
+P+T+ +VPP
Sbjct: 70 VPVTVIEVPP 79


>sp|RL3_METKA|LARGE ribosomal subunit protein uL3|Methanopyrus kandleri (strain AV19

Query: 1 MPITINDVPP 10
+P+TI D PP
Sbjct: 74 VPVTILDAPP 83


>sp|TRM1_METMJ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoculleus marisnigri

Query: 1 MPITIND 7
+P+TIND
Sbjct: 76 IPVTIND 82


>sp|RL3_METS3|LARGE ribosomal subunit protein uL3|Methanobrevibacter smithii (strain

Query: 2 PITINDVPP 10
P+T+ +VPP
Sbjct: 70 PVTVLEVPP 78


>sp|RL3_AERPE|LARGE ribosomal subunit protein uL3|Aeropyrum pernix (strain ATCC

Query: 1 MPITINDVPP 10
+P+TI + PP
Sbjct: 73 VPVTIVETPP 82


>sp|TRM1_METB6|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanoregula boonei

Query: 1 MPITINDVPP 10
+P+TIND P
Sbjct: 76 IPVTINDRDP 85


>sp|RL3_THESM|LARGE ribosomal subunit protein uL3|Thermococcus sibiricus (strain DSM

Query: 1 MPITINDVPP 10
+P+TI + PP
Sbjct: 68 VPVTIVEAPP 77


>sp|RL3_METST|LARGE ribosomal subunit protein uL3|Methanosphaera stadtmanae (strain

Query: 1 MPITINDVPP 10
+P+TI + PP
Sbjct: 69 VPVTILEAPP 78


>sp|RL3_METH6|LARGE ribosomal subunit protein uL3|Methanothrix harundinacea (strain

Query: 1 MPITINDVPP 10
+P+TI + PP
Sbjct: 70 VPVTILETPP 79


>sp|RL3_METJA|LARGE ribosomal subunit protein uL3|Methanocaldococcus jannaschii

Query: 2 PITINDVPP 10
PITI + PP
Sbjct: 71 PITILEAPP 79


>sp|MCH_ARCFU|METHENYLTETRAHYDROMETHANOPTERIN cyclohydrolase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 TINDVP 9
TINDVP
Sbjct: 69 TINDVP 74


>sp|RL3_PYRNV|LARGE ribosomal subunit protein uL3|Pyrobaculum neutrophilum (strain

Query: 2 PITINDVPP 10
P+T+ D PP
Sbjct: 73 PVTVLDAPP 81


>sp|TRM1_METLZ|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanocorpusculum

Query: 1 MPITIND 7
+P+TIND
Sbjct: 76 IPVTIND 82


>sp|OFOA_SACSO|2-OXOACID:FERREDOXIN oxidoreductase subunit alpha|Saccharolobus solfataricus

Query: 3 ITINDVPP 10
+TI+D PP
Sbjct: 52 LTISDKPP 59


>sp|Y547_METJA|UNCHARACTERIZED ATP-binding protein MJ0547|Methanocaldococcus jannaschii (strain

Query: 2 PITINDV 8
P+T+NDV
Sbjct: 60 PVTLNDV 66


>sp|RL3_PICTO|LARGE ribosomal subunit protein uL3|Picrophilus torridus (strain ATCC

Query: 2 PITINDVPP 10
P+T+ +VPP
Sbjct: 71 PVTVVEVPP 79


>sp|RL3_METS5|LARGE ribosomal subunit protein uL3|Metallosphaera sedula (strain ATCC

Query: 1 MPITINDVPP 10
+P+T+ + PP
Sbjct: 73 VPVTVLETPP 82


>sp|Y912_METMA|UPF0288 protein MM_0912|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 MPITINDV 8
MPIT N++
Sbjct: 1 MPITSNEI 8




109|Sequence|541|550|NDVPPCISQL

>sp|PRIL_METBU|DNA primase large subunit PriL|Methanococcoides burtonii (strain DSM

Query: 4 PPCISQ 9
PPCI+Q
Sbjct: 235 PPCITQ 240


>sp|PRIL_METKA|DNA primase large subunit PriL|Methanopyrus kandleri (strain AV19 /

Query: 4 PPCISQL 10
PPCI +L
Sbjct: 300 PPCIREL 306


>sp|PRIL_METBF|DNA primase large subunit PriL|Methanosarcina barkeri (strain Fusaro /

Query: 4 PPCISQ 9
PPCIS
Sbjct: 228 PPCISH 233


>sp|PRIL_METAC|DNA primase large subunit PriL|Methanosarcina acetivorans (strain ATCC

Query: 4 PPCISQ 9
PPCIS
Sbjct: 228 PPCISH 233


>sp|PRIL_SACS2|DNA primase large subunit PriL|Saccharolobus solfataricus (strain ATCC

Query: 3 VPPCISQL 10
+PPCI +
Sbjct: 213 IPPCIENI 220


>sp|PRIL_SULTO|DNA primase large subunit PriL|Sulfurisphaera tokodaii (strain DSM

Query: 4 PPCISQL 10
PPCI +L
Sbjct: 220 PPCILEL 226


>sp|RS17_SACS2|SMALL ribosomal subunit protein uS17|Saccharolobus solfataricus (strain

Query: 3 VPPCIS 8
VPPCI+
Sbjct: 81 VPPCIN 86


>sp|EF1A_METMJ|ELONGATION factor 1-alpha|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 NDVPPCISQ 9
+DVPP +++
Sbjct: 308 SDVPPTVAE 316


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 NDVPPCISQL 10
NDV C+ ++
Sbjct: 47 NDVKKCVDEI 56


>sp|RS17_METBF|SMALL ribosomal subunit protein uS17|Methanosarcina barkeri (strain

Query: 4 PPCIS 8
PPCIS
Sbjct: 75 PPCIS 79




110|Sequence|546|555|CISQLLDNEE

>sp|ACYP_METBU|ACYLPHOSPHATASE burtonii (strain DSM 6242

Query: 1 CISQLLDN 8
CIS+LLD+
Sbjct: 58 CISELLDH 65


>sp|DP2L_METAR|DNA polymerase II large subunit|Methanocella arvoryzae (strain DSM

Query: 2 ISQLLDNEE 10
+SQ+LDN E
Sbjct: 402 VSQILDNGE 410


>sp|SYA_ARCFU|ALANINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 ISQLLDNEE 10
+ QLLD EE
Sbjct: 884 VQQLLDREE 892


>sp|SYK1_METMA|LYSINE--TRNA ligase 1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 CISQLLDN 8
CI +L+DN
Sbjct: 397 CIRELVDN 404


>sp|KPTA_PYRFU|PROBABLE RNA 2'-phosphotransferase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 CISQLLD 7
CIS++LD
Sbjct: 177 CISEILD 183


>sp|GGR_METM7|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanococcus maripaludis (strain C7 /

Query: 4 QLLDNE 9
QLLDNE
Sbjct: 187 QLLDNE 192


>sp|GLYA_HALSA|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 CISQLLDN 8
CI++++DN
Sbjct: 383 CIARVIDN 390


>sp|GLYA_HALS3|SERINE hydroxymethyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 1 CISQLLDN 8
CI++++DN
Sbjct: 383 CIARVIDN 390


>sp|SYK_METBF|LYSINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 CISQLLDN 8
CI +L DN
Sbjct: 397 CIKELADN 404


>sp|SYK_METBA|LYSINE--TRNA ligase|Methanosarcina barkeri

Query: 1 CISQLLDN 8
CI +L DN
Sbjct: 397 CIKELADN 404




111|Sequence|551|560|LDNEESWDFN

>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 DNEESWDFN 10
D + SWDFN
Sbjct: 43 DTKYSWDFN 51


>sp|AATA2_METHJ|A-TYPE ATP synthase subunit A|Methanospirillum hungatei JF-1 (strain ATCC

Query: 1 LDNEESWDFN 10
LD E+ W FN
Sbjct: 111 LDREKRWAFN 120


>sp|FRHA_METBF|COENZYME F420 hydrogenase subunit alpha|Methanosarcina barkeri (strain

Query: 1 LDNEESWDF 9
LD+ +WDF
Sbjct: 246 LDDNPTWDF 254


>sp|AATA_METBA|A-TYPE ATP synthase subunit A|Methanosarcina barkeri

Query: 1 LDNEESWDF 9
LD+++ WDF
Sbjct: 111 LDHKKLWDF 119


>sp|AATA_METAC|A-TYPE ATP synthase subunit A|Methanosarcina acetivorans (strain ATCC

Query: 1 LDNEESWDF 9
LD+E+ W+F
Sbjct: 111 LDHEKLWEF 119


>sp|AATA_METLZ|A-TYPE ATP synthase subunit A|Methanocorpusculum labreanum (strain ATCC

Query: 1 LDNEESWDF 9
LD+E+ W F
Sbjct: 114 LDHEKKWTF 122


>sp|RNZ_HALMA|RIBONUCLEASE Z|Haloarcula marismortui (strain ATCC 43049

Query: 5 ESWDFN 10
++WDFN
Sbjct: 75 QTWDFN 80


>sp|AGLB2_PYRFU|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase 2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LDNEESWDFN 10
L NE++W+ N
Sbjct: 628 LANEKAWETN 637


>sp|AATA_METBU|A-TYPE ATP synthase subunit A|Methanococcoides burtonii (strain DSM 6242

Query: 1 LDNEESWDF 9
LD E W+F
Sbjct: 111 LDRERVWEF 119


>sp|AATA_NATPD|A-TYPE ATP synthase subunit A|Natronomonas pharaonis (strain ATCC 35678

Query: 1 LDNEESWDFN 10
+D E++W+FN
Sbjct: 119 IDLEKTWEFN 128


>sp|RNZ_HALSA|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 700922

Query: 6 SWDFN 10
+WDFN
Sbjct: 76 TWDFN 80


>sp|RNZ_HALS3|RIBONUCLEASE Z|Halobacterium salinarum (strain ATCC 29341

Query: 6 SWDFN 10
+WDFN
Sbjct: 76 TWDFN 80


>sp|CAPPA_PYRHO|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus horikoshii (strain ATCC 700860

Query: 3 NEESWDF 9
+E+ WDF
Sbjct: 44 DEQMWDF 50


>sp|CAPPA_PYRAB|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus abyssi (strain GE5 /

Query: 3 NEESWDF 9
+E+ WDF
Sbjct: 44 DEQMWDF 50


>sp|HIS1_SULAC|ATP phosphoribosyltransferase|Sulfolobus acidocaldarius (strain ATCC

Query: 6 SWDFN 10
SWD+N
Sbjct: 99 SWDYN 103


>sp|Y420_METJA|UNCHARACTERIZED protein MJ0420|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LDNEESWDFN 10
L + ++WD N
Sbjct: 237 LSSNQNWDLN 246


>sp|CAPPA_PYRFU|PHOSPHOENOLPYRUVATE carboxylase|Pyrococcus furiosus (strain ATCC 43587

Query: 3 NEESWDF 9
+E+ WDF
Sbjct: 44 DEQMWDF 50


>sp|SYL2_METS5|LEUCINE--TRNA ligase 2|Metallosphaera sedula (strain ATCC 51363

Query: 4 EESWDF 9
EE+WD+
Sbjct: 545 EETWDY 550


>sp|MFNA_NATPD|PROBABLE L-aspartate decarboxylase|Natronomonas pharaonis (strain ATCC 35678

Query: 4 EESWDFN 10
E +WDF+
Sbjct: 186 EHAWDFD 192


>sp|RNP3_THEGJ|RIBONUCLEASE P protein component 3|Thermococcus gammatolerans (strain DSM

Query: 1 LDNEESWD 8
LD E WD
Sbjct: 36 LDTEPDWD 43


>sp|FKBPS_METTL|SHORT-TYPE peptidyl-prolyl cis-trans isomerase|Methanothermococcus

Query: 2 DNEESWDFN 10
DNE + DFN
Sbjct: 124 DNEVTLDFN 132


>sp|OFOB2_SULTO|2-OXOACID:FERREDOXIN oxidoreductase 2, subunit beta|Sulfurisphaera tokodaii (strain DSM

Query: 1 LDNEESWD 8
LDN WD
Sbjct: 216 LDNVPGWD 223


>sp|SYS_HYPBU|SERINE--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 4 EESWD 8
EESWD
Sbjct: 317 EESWD 321


>sp|AATA_METBF|A-TYPE ATP synthase subunit A|Methanosarcina barkeri (strain Fusaro /

Query: 1 LDNEESWDF 9
LD+++ W+F
Sbjct: 111 LDHKKLWEF 119


>sp|CAPPA_HALSA|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 700922

Query: 3 NEESWDF 9
+E+ WDF
Sbjct: 46 DEQMWDF 52


>sp|CAPPA_HALS3|PHOSPHOENOLPYRUVATE carboxylase|Halobacterium salinarum (strain ATCC 29341

Query: 3 NEESWDF 9
+E+ WDF
Sbjct: 46 DEQMWDF 52


>sp|AGLU_SACS9|ALPHA-GLUCOSIDASE solfataricus (strain 98/2) (Sulfolobus

Query: 2 DNEESWD 8
DN SWD
Sbjct: 416 DNTPSWD 422


>sp|AGLU_SACS2|ALPHA-GLUCOSIDASE solfataricus (strain ATCC 35092

Query: 2 DNEESWD 8
DN SWD
Sbjct: 416 DNTPSWD 422


>sp|AATA_METMA|A-TYPE ATP synthase subunit A|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LDNEESWDF 9
LD+++ W+F
Sbjct: 111 LDHKKLWEF 119


>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 NEESWDF 9
+E+ WDF
Sbjct: 44 DEQMWDF 50


>sp|GUAAB_SACI7|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160


>sp|GUAAB_SACI6|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160


>sp|GUAAB_SACI4|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160


>sp|GUAAB_SACI3|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160


>sp|GUAAB_SACI2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160


>sp|GUAAB_SACI1|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus islandicus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160


>sp|SYS_PICTO|SERINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 4 EESWDF 9
E+SWDF
Sbjct: 311 EDSWDF 316


>sp|SYS_THEAC|SERINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 EESWDF 9
E+SWDF
Sbjct: 312 EDSWDF 317


>sp|GUAAB_SACS2|GMP synthase [glutamine-hydrolyzing] subunit B|Saccharolobus

Query: 1 LDNEESWDF 9
+D E+ W F
Sbjct: 152 IDTEKEWGF 160




112|Sequence|556|565|SWDFNIFELE

>sp|QUEE_PYRAE|7-CARBOXY-7-DEAZAGUANINE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 SWDFN 5
SWDFN
Sbjct: 47 SWDFN 51


>sp|PUS10_THEPD|TRNA pseudouridine synthase Pus10|Thermofilum pendens (strain DSM 2475

Query: 1 SWDFNIFEL 9
S++FN FE+
Sbjct: 128 SYEFNTFEV 136


>sp|DTDA_METM7|D-AMINOACYL-TRNA deacylase|Methanococcus maripaludis (strain C7 /

Query: 1 SWDFNIFELE 10
++ +N+FELE
Sbjct: 23 NYGYNVFELE 32


>sp|UDGA_ARCFU|TYPE-4 uracil-DNA glycosylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 4 FNIFELE 10
FN+F+LE
Sbjct: 129 FNLFDLE 135


>sp|UPP_SULTO|URACIL phosphoribosyltransferase|Sulfurisphaera tokodaii (strain DSM

Query: 3 DFNIFELE 10
D+NI E+E
Sbjct: 48 DYNIIEVE 55


>sp|NSR_THEKO|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Thermococcus kodakarensis

Query: 2 WDFNIFE 8
WD +FE
Sbjct: 29 WDVKVFE 35


>sp|NSR_PYRAB|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus abyssi (strain

Query: 2 WDFNIFE 8
WD +FE
Sbjct: 33 WDVKVFE 39


>sp|NCPPR_PYRHO|NAD(P)H coenzyme A polysulfide/persulfide reductase|Pyrococcus horikoshii

Query: 2 WDFNIFE 8
WD +FE
Sbjct: 32 WDVKVFE 38


>sp|NSR_PYRFU|NAD(P)H sulfur oxidoreductase (CoA-dependent)|Pyrococcus furiosus (strain

Query: 2 WDFNIFE 8
WD +FE
Sbjct: 29 WDVKVFE 35


>sp|DHYS_METTH|PROBABLE deoxyhypusine synthase|Methanothermobacter thermautotrophicus

Query: 1 SWDFNIFELE 10
S DF +FE E
Sbjct: 127 SEDFEVFESE 136


>sp|AGLB_METVO|DOLICHYL-PHOSPHOOLIGOSACCHARIDE-PROTEIN glycotransferase|Methanococcus voltae

Query: 1 SWDFNI 6
+WDFN+
Sbjct: 731 NWDFNL 736


>sp|Y772_METJA|UNCHARACTERIZED protein MJ0772|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 WDFNIFE 8
WD IFE
Sbjct: 342 WDIQIFE 348




113|Sequence|561|570|IFELEAITHK

>sp|CMR1B_PYRFU|CRISPR system Cmr subunit Cmr1-2|Pyrococcus furiosus (strain ATCC 43587

Query: 1 IFELEAIT 8
IF+LEAIT
Sbjct: 5 IFDLEAIT 12


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 IFELEAITHK 10
IFELEA+ K
Sbjct: 138 IFELEAMVAK 147


>sp|GUAAA_META3|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus aeolicus

Query: 1 IFELEAITHK 10
I E+EA+ HK
Sbjct: 144 ICEVEAMKHK 153




114|Sequence|566|575|AITHKRPLVY

>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 1 AITHKRPLVY 10
AI RPLVY
Sbjct: 85 AIRRTRPLVY 94


>sp|SYA_AERPE|ALANINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 2 ITHKRPL 8
ITH RPL
Sbjct: 621 ITHHRPL 627


>sp|MOAA_METTM|PROBABLE GTP 3',8-cyclase|Methanothermobacter marburgensis (strain ATCC

Query: 4 HKRPLV 9
H+RPLV
Sbjct: 7 HRRPLV 12


>sp|TMG10_METTH|TRNA (guanine(10)-N2)-dimethyltransferase|Methanothermobacter

Query: 4 HKRPLVY 10
HKRP Y
Sbjct: 161 HKRPFFY 167


>sp|G1PDH_PYRNV|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum neutrophilum (strain DSM 2338

Query: 4 HKRPLV 9
HKRPL+
Sbjct: 97 HKRPLI 102


>sp|KAE1B_THEVO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 1 AITHKRPLV 9
A+T KRP++
Sbjct: 95 AVTLKRPII 103


>sp|PURT_SACS2|FORMATE-DEPENDENT phosphoribosylglycinamide formyltransferase|Saccharolobus

Query: 2 ITHKRPLVY 10
I HKRP Y
Sbjct: 225 IEHKRPSYY 233


>sp|GUAAA_METVS|GMP synthase [glutamine-hydrolyzing] subunit A|Methanococcus vannielii

Query: 1 AITHKRPLVY 10
A HK LVY
Sbjct: 149 AFKHKEKLVY 158


>sp|G1PDH_PYRAE|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 HKRPLV 9
HK+PLV
Sbjct: 97 HKKPLV 102


>sp|G1PDH_PYRIL|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Pyrobaculum islandicum (strain DSM 4184

Query: 4 HKRPLV 9
HK+PLV
Sbjct: 97 HKKPLV 102




115|Sequence|571|580|RPLVYLGLKV

>sp|Y2580_AERPE|UNCHARACTERIZED protein APE_2580|Aeropyrum pernix (strain ATCC 700893

Query: 1 RPLVYLG 7
RPL+YLG
Sbjct: 160 RPLMYLG 166


>sp|FTSY_SULAC|SIGNAL recognition particle receptor FtsY|Sulfolobus acidocaldarius

Query: 1 RPLVYLGL 8
+P+VY+G+
Sbjct: 340 KPVVYMGV 347


>sp|FTSY_METJA|SIGNAL recognition particle receptor FtsY|Methanocaldococcus jannaschii

Query: 1 RPLVYLGL 8
+P++YLG+
Sbjct: 369 KPILYLGV 376


>sp|RNP3_METVS|RIBONUCLEASE P protein component 3|Methanococcus vannielii (strain ATCC 35089

Query: 3 LVYLGLKV 10
LVY GLK+
Sbjct: 55 LVYSGLKI 62


>sp|RPO1N_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo1N|Thermoplasma acidophilum (strain ATCC

Query: 5 YLGLKV 10
YLGLKV
Sbjct: 725 YLGLKV 730


>sp|Y945_METJA|UNCHARACTERIZED protein MJ0945|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 PLVYLGL 8
P+VYLG+
Sbjct: 28 PIVYLGV 34


>sp|RNP3_METKA|RIBONUCLEASE P protein component 3|Methanopyrus kandleri (strain AV19 /

Query: 1 RPLVYL 6
RPLVYL
Sbjct: 90 RPLVYL 95


>sp|AAT_METJA|PROBABLE aspartate aminotransferase|Methanocaldococcus jannaschii (strain

Query: 1 RPLVYLGLK 9
R L+Y GLK
Sbjct: 292 RDLIYNGLK 300


>sp|Y1069_METJA|UNCHARACTERIZED glycosyltransferase MJ1069|Methanocaldococcus jannaschii (strain

Query: 2 PLVYLGLKV 10
P++Y GL++
Sbjct: 185 PIIYRGLEI 193




116|Sequence|576|585|LGLKVFSRFG

>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 2 GLKVFSR 8
G+K+FSR
Sbjct: 264 GIKIFSR 270


>sp|DNLI_PYRAE|DNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 GLKVFSR 8
G+K+FSR
Sbjct: 265 GVKIFSR 271


>sp|RNP3_METMP|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain DSM 14266

Query: 2 GLKVFSRFG 10
G+K RFG
Sbjct: 16 GIKTLKRFG 24


>sp|RNP3_METM7|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C7 /

Query: 2 GLKVFSRFG 10
G+K RFG
Sbjct: 16 GIKTLKRFG 24


>sp|RNP3_METM6|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C6 /

Query: 2 GLKVFSRFG 10
G+K RFG
Sbjct: 16 GIKTLKRFG 24


>sp|RNP3_METM5|RIBONUCLEASE P protein component 3|Methanococcus maripaludis (strain C5 /

Query: 2 GLKVFSRFG 10
G+K RFG
Sbjct: 16 GIKTLKRFG 24


>sp|Y114_METJA|UNCHARACTERIZED protein MJ0114|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 KVFSRFG 10
KV+S+FG
Sbjct: 3 KVYSKFG 9




117|Sequence|581|590|FSRFGVCEFL

>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 2 SRFGVCE 8
SR G+CE
Sbjct: 80 SRIGICE 86


>sp|SYE_METMA|GLUTAMATE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FSRFGVC 7
F RFG C
Sbjct: 548 FERFGFC 554


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 FSRFGVC 7
F RFG C
Sbjct: 547 FERFGFC 553


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 FSRFGVC 7
F RFG C
Sbjct: 548 FERFGFC 554


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FSRFGVC 7
F RFG C
Sbjct: 548 FERFGFC 554


>sp|AGLF_HALVD|UTP--GLUCOSE-1-PHOSPHATE uridylyltransferase AglF|Haloferax volcanii (strain ATCC 29605

Query: 2 SRFGVC 7
SR+GVC
Sbjct: 139 SRYGVC 144


>sp|CAPPA_SULAC|PHOSPHOENOLPYRUVATE carboxylase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 FSRFGVCEFL 10
FSR+GV E +
Sbjct: 40 FSRYGVEEVM 49


>sp|PGP_NATPD|PHOSPHOGLYCOLATE phosphatase|Natronomonas pharaonis (strain ATCC 35678

Query: 5 GVCEFL 10
G+CEFL
Sbjct: 48 GLCEFL 53


>sp|END4_CENSY|PROBABLE endonuclease 4|Cenarchaeum symbiosum (strain A)

Query: 3 RFGVC 7
RFGVC
Sbjct: 171 RFGVC 175


>sp|GATA_METJA|GLUTAMYL-TRNA(GLN) amidotransferase subunit A|Methanocaldococcus jannaschii (strain

Query: 2 SRFGVCEF 9
SR+G+C+
Sbjct: 177 SRYGLCDL 184


>sp|NTPTH_PYRIL|NUCLEOSIDE-TRIPHOSPHATASE THEP1|Pyrobaculum islandicum (strain DSM 4184

Query: 2 SRFGVCEFL 10
S+F +C F+
Sbjct: 34 SKFAICGFI 42


>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 5 GVCEFL 10
G+CE+L
Sbjct: 170 GICEYL 175


>sp|AMZA_METJA|ARCHAEMETZINCIN jannaschii (strain ATCC 43067

Query: 4 FGVCEFL 10
FG+CE L
Sbjct: 31 FGMCEIL 37


>sp|LIVH_METJA|PROBABLE branched-chain amino acid transport|Methanocaldococcus jannaschii

Query: 4 FGVCEFL 10
FG+C +L
Sbjct: 64 FGICPYL 70




118|Sequence|586|595|VCEFLNCSET

>sp|ENGB_METJA|PROBABLE GTP-binding protein EngB|Methanocaldococcus jannaschii (strain ATCC

Query: 1 VCEFLNC 7
+CE+L C
Sbjct: 171 ICEYLKC 177


>sp|CH60_METB6|CHAPERONIN GroEL|Methanoregula boonei (strain DSM 21154

Query: 1 VCEFLNCS 8
VCE+ +CS
Sbjct: 212 VCEYEDCS 219


>sp|DHQS_METLZ|3-DEHYDROQUINATE synthase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 2 CEFLNCSET 10
C FL CSE+
Sbjct: 208 CLFLVCSES 216


>sp|SPSS_METBF|O-PHOSPHO-L-SERYL-TRNA:CYS-TRNA synthase|Methanosarcina barkeri (strain Fusaro /

Query: 3 EFLNCSE 9
EFL+C E
Sbjct: 76 EFLDCDE 82


>sp|GATE_METMP|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain DSM

Query: 3 EFLNCSE 9
E++NC E
Sbjct: 365 EYMNCGE 371


>sp|GATE_METM6|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C6 /

Query: 3 EFLNCSE 9
E++NC E
Sbjct: 365 EYMNCGE 371


>sp|GATE_METM5|GLUTAMYL-TRNA(GLN) amidotransferase subunit E|Methanococcus maripaludis (strain C5 /

Query: 3 EFLNCSE 9
E++NC E
Sbjct: 365 EYMNCGE 371


>sp|RS8E_METLZ|SMALL ribosomal subunit protein eS8|Methanocorpusculum labreanum

Query: 2 CEFLNCSE 9
CEF N S+
Sbjct: 58 CEFANVSD 65


>sp|SYH_METJA|HISTIDINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 CEFLNCSE 9
CE + C E
Sbjct: 127 CELIGCKE 134




119|Sequence|591|600|NCSETTLRAW

>sp|LONB_PYRHO|ARCHAEAL Lon protease|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 NCSETTLRAW 10
N E+TLR W
Sbjct: 372 NIKESTLRWW 381


>sp|SYA_PYRHO|ALANINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 CSETTLRAW 10
C E +R W
Sbjct: 750 CGEAAIREW 758


>sp|Y827_METJA|UNCHARACTERIZED protein MJ0827|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NCSETTLRA 9
N ++TTLRA
Sbjct: 114 NLAQTTLRA 122


>sp|CAS6A_METJA|CRISPR-ASSOCIATED endoribonuclease Cas6 1|Methanocaldococcus jannaschii (strain ATCC

Query: 2 CSETTLRAW 10
CSE + W
Sbjct: 204 CSEMVFKVW 212


>sp|PURL_CALMQ|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Caldivirga maquilingensis (strain ATCC

Query: 1 NCSETTLRAW 10
+CS + RAW
Sbjct: 34 HCSYKSSRAW 43


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 2 CSETTLRAW 10
C E +R W
Sbjct: 750 CGEAAVREW 758




120|Sequence|596|605|TLRAWFQVIE

>sp|Y2165_ARCFU|UNCHARACTERIZED protein AF_2165|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 RAWFQVIE 10
R WFQ+++
Sbjct: 32 RRWFQLVQ 39


>sp|Y215_METJA|UNCHARACTERIZED protein MJ0215|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRAWFQVIE 10
LR W ++IE
Sbjct: 52 LRRWCEIIE 60


>sp|Y3520_METJA|UNCHARACTERIZED protein MJECL20|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 LRAWFQVIE 10
LR W ++IE
Sbjct: 42 LRRWCEIIE 50


>sp|RS3A_ARCFU|SMALL ribosomal subunit protein eS1|Archaeoglobus fulgidus (strain ATCC

Query: 1 TLRAWFQVI 9
TL+ WF +I
Sbjct: 15 TLKKWFTLI 23


>sp|RS3A_AERPE|SMALL ribosomal subunit protein eS1|Aeropyrum pernix (strain ATCC

Query: 2 LRAWFQVI 9
L+ WF+V+
Sbjct: 12 LKKWFKVV 19




121|Sequence|601|610|FQVIEANYHS

>sp|SYY_AERPE|TYROSINE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 FQVIEANYHS 10
F V+EA +H+
Sbjct: 69 FSVLEATWHA 78


>sp|NADK_THEKO|NAD kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 QVIEANYH 9
+VIE +YH
Sbjct: 108 RVIEGDYH 115


>sp|HIS8_THEKO|HISTIDINOL-PHOSPHATE aminotransferase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FQVIEANY 8
++VIE NY
Sbjct: 12 YRVIEGNY 19


>sp|DAPAL_PYRAE|UNCHARACTERIZED DapA-like lyase PAE2915|Pyrobaculum aerophilum (strain ATCC 51768

Query: 2 QVIEANYH 9
+++EA YH
Sbjct: 30 KIVEAGYH 37


>sp|DNLI_METLZ|DNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 IEANYHS 10
IEA YHS
Sbjct: 376 IEAYYHS 382


>sp|DAPAL_PYRAR|UNCHARACTERIZED DapA-like lyase Pars_0992|Pyrobaculum arsenaticum (strain DSM

Query: 2 QVIEANYH 9
+++EA YH
Sbjct: 30 RIVEAGYH 37


>sp|RPO11_THEVO|DNA-DIRECTED RNA polymerase subunit Rpo11|Thermoplasma volcanium (strain ATCC

Query: 2 QVIEANYH 9
QVIEA Y+
Sbjct: 45 QVIEARYY 52




122|Sequence|606|615|ANYHSSNAYH

>sp|COXX_HALWD|PROTOHEME IX farnesyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 NYHSSNAY 9
++H+SNAY
Sbjct: 457 SFHASNAY 464


>sp|COXX_HALSA|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 700922

Query: 2 NYHSSNAY 9
++H+SNAY
Sbjct: 420 SFHASNAY 427


>sp|COXX_HALS3|PROTOHEME IX farnesyltransferase|Halobacterium salinarum (strain ATCC 29341

Query: 2 NYHSSNAY 9
++H+SNAY
Sbjct: 437 SFHASNAY 444


>sp|COXX2_NATPD|PROTOHEME IX farnesyltransferase 2|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NYHSSNAY 9
++H+SNAY
Sbjct: 411 SFHASNAY 418


>sp|COXX1_NATPD|PROTOHEME IX farnesyltransferase 1|Natronomonas pharaonis (strain ATCC 35678

Query: 2 NYHSSNAY 9
++H+SNAY
Sbjct: 432 SFHASNAY 439


>sp|COXX_HALMA|PROTOHEME IX farnesyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 3 YHSSNAY 9
+H+SNAY
Sbjct: 442 FHASNAY 448


>sp|HEM3_SACI7|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 2 NYHSSNAY 9
NYH N Y
Sbjct: 174 NYHRLNVY 181


>sp|HEM3_SACI6|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.4 /

Query: 2 NYHSSNAY 9
NYH N Y
Sbjct: 174 NYHRLNVY 181


>sp|HEM3_SACI4|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.14.25

Query: 2 NYHSSNAY 9
NYH N Y
Sbjct: 174 NYHRLNVY 181


>sp|HEM3_SACI3|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain M.16.27)

Query: 2 NYHSSNAY 9
NYH N Y
Sbjct: 174 NYHRLNVY 181


>sp|HEM3_SACI2|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain L.S.2.15

Query: 2 NYHSSNAY 9
NYH N Y
Sbjct: 174 NYHRLNVY 181


>sp|HEM3_SACI1|PROBABLE porphobilinogen deaminase|Saccharolobus islandicus (strain

Query: 2 NYHSSNAY 9
NYH N Y
Sbjct: 174 NYHRLNVY 181


>sp|RL1_META3|LARGE ribosomal subunit protein uL1|Methanococcus aeolicus (strain ATCC

Query: 3 YHSSNAY 9
YH NAY
Sbjct: 194 YHVKNAY 200


>sp|RPO1C_AERPE|DNA-DIRECTED RNA polymerase subunit Rpo1C|Aeropyrum pernix (strain ATCC 700893

Query: 5 SSNAYH 10
+SNAYH
Sbjct: 223 NSNAYH 228


>sp|ARGD_METTH|ACETYLORNITHINE aminotransferase|Methanothermobacter thermautotrophicus (strain

Query: 4 HSSNAYH 10
HSSN Y+
Sbjct: 73 HSSNIYY 79




123|Sequence|611|620|SNAYHNSTHA

>sp|LEUC_HALVD|3-ISOPROPYLMALATE dehydratase large subunit|Haloferax volcanii (strain ATCC 29605

Query: 3 AYHNSTHA 10
AY N THA
Sbjct: 53 AYPNRTHA 60


>sp|BTUFA_HALSA|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 700922

Query: 1 SNAYHNST 8
+NA+HN+T
Sbjct: 312 ANAFHNTT 319


>sp|BTUFA_HALS3|COBALAMIN-BINDING protein|Halobacterium salinarum (strain ATCC 29341

Query: 1 SNAYHNST 8
+NA+HN+T
Sbjct: 312 ANAFHNTT 319


>sp|WTPA_PYRAB|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Pyrococcus abyssi (strain GE5 /

Query: 1 SNAYHNSTH 9
+N Y N TH
Sbjct: 189 TNIYANGTH 197


>sp|Y099_SACS2|UPF0173 metal-dependent hydrolase SSO0099|Saccharolobus solfataricus

Query: 1 SNAYHNSTHA 10
+ A H+STH+
Sbjct: 112 TKAVHSSTHS 121


>sp|WTPA_THEKO|MOLYBDATE/TUNGSTATE-BINDING protein WtpA|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 SNAYHNSTH 9
+N Y N TH
Sbjct: 193 TNIYANGTH 201


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 NAYHNSTH 9
N YHNST+
Sbjct: 1244 NIYHNSTY 1251




124|Sequence|616|625|NSTHAADVLH

>sp|SYW_HYPBU|TRYPTOPHAN--TRNA ligase|Hyperthermus butylicus (strain DSM 5456

Query: 3 THAADVLH 10
T AAD+LH
Sbjct: 192 TQAADILH 199


>sp|SYW_AERPE|TRYPTOPHAN--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 3 THAADVLH 10
T AAD+LH
Sbjct: 191 TQAADILH 198


>sp|SYW_THEVO|TRYPTOPHAN--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 4 HAADVLH 10
AADVLH
Sbjct: 179 QAADVLH 185


>sp|SYW_THEAC|TRYPTOPHAN--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 HAADVLH 10
AADVLH
Sbjct: 179 QAADVLH 185


>sp|Y215_METTH|UNCHARACTERIZED protein MTH_215|Methanothermobacter thermautotrophicus (strain ATCC

Query: 1 NSTHAADVL 9
N TH D+L
Sbjct: 194 NETHGRDIL 202


>sp|PLS_PYRFU|PYROLYSIN furiosus (strain ATCC 43587

Query: 2 STHAADVL 9
+TH ADV+
Sbjct: 446 ATHGADVI 453


>sp|GCH1L_HALSA|GTP cyclohydrolase 1 type 2|Halobacterium salinarum (strain ATCC 700922

Query: 1 NSTHAADVL 9
N+ H ADVL
Sbjct: 108 NAAHVADVL 116




125|Sequence|621|630|ADVLHATAFF

>sp|CAS3_METTH|CRISPR-ASSOCIATED nuclease/helicase Cas3|Methanothermobacter thermautotrophicus

Query: 2 DVLHATAF 9
D+LH+TAF
Sbjct: 350 DILHSTAF 357


>sp|GGPS_SULAC|GERANYLGERANYL diphosphate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 ADVLHATAF 9
D+LHA AF
Sbjct: 110 GDLLHAKAF 118


>sp|DCDB_HALSA|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC 700922

Query: 1 ADVLHATAFF 10
A V+HATA F
Sbjct: 112 AVVVHATAGF 121


>sp|DCDB_HALS3|DCTP deaminase, dUMP-forming|Halobacterium salinarum (strain ATCC 29341

Query: 1 ADVLHATAFF 10
A V+HATA F
Sbjct: 112 AVVVHATAGF 121




126|Sequence|626|635|ATAFFLGKER

>sp|GGR_METPE|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanosphaerula palustris (strain ATCC BAA-1556

Query: 1 ATAFFLGKE 9
AT F+LG E
Sbjct: 194 ATVFYLGNE 202


>sp|GGR_METB6|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase|Methanoregula boonei (strain DSM 21154

Query: 1 ATAFFLGKE 9
AT F+LG E
Sbjct: 194 ATIFYLGNE 202


>sp|HIS7_PYRFU|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ATAFFLGKE 9
A AF+LGK+
Sbjct: 33 AFAFYLGKD 41


>sp|TRPB1_THEKO|TRYPTOPHAN synthase beta chain 1|Thermococcus kodakarensis (strain ATCC

Query: 3 AFFLGKER 10
A F+GKER
Sbjct: 96 AKFMGKER 103


>sp|HPPA2_METMA|K(+)-INSENSITIVE pyrophosphate-energized proton pump|Methanosarcina mazei (strain

Query: 2 TAFFLGKE 9
T FFLG E
Sbjct: 572 TGFFLGPE 579


>sp|HMGCS_THEAC|HYDROXYMETHYLGLUTARYL-COA synthase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 ATAFFLGKE 9
TAF +GK+
Sbjct: 158 GTAFIIGKD 166


>sp|COMC_METJA|L-SULFOLACTATE dehydrogenase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 FFLGKER 10
FF+GKE
Sbjct: 271 FFMGKEE 277


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 AFFLGKER 10
A+F+GK R
Sbjct: 262 AYFIGKTR 269




127|Sequence|631|640|LGKERVKGSL

>sp|SPEE_SULAC|POLYAMINE aminopropyltransferase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 KERVKGSL 10
KERV GSL
Sbjct: 256 KERVTGSL 263


>sp|SPEE_SULTO|POLYAMINE aminopropyltransferase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 3 KERVKGSL 10
KER+ GSL
Sbjct: 254 KERIDGSL 261


>sp|Y3539_METJA|UPF0252 protein MJECL39|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LGKERVK 7
LGKE+VK
Sbjct: 219 LGKEKVK 225


>sp|NADE_METAC|NH(3)-DEPENDENT NAD(+) synthetase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LGKERVKG 8
LGKERV G
Sbjct: 47 LGKERVLG 54


>sp|TTRA_ARCFU|TETRATHIONATE reductase subunit A|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 GKERVKGSL 10
GK RVK +L
Sbjct: 478 GKRRVKSAL 486


>sp|MPTA_METKA|GTP cyclohydrolase MptA|Methanopyrus kandleri (strain AV19 /

Query: 2 GKERVKGSL 10
GKERVK L
Sbjct: 175 GKERVKHRL 183




128|Sequence|636|645|VKGSLDQLDE

>sp|PYRF_SACS2|OROTIDINE 5'-phosphate decarboxylase|Saccharolobus solfataricus (strain

Query: 1 VKGSLDQL 8
VKGSLD+L
Sbjct: 90 VKGSLDEL 97


>sp|SYY_METST|TYROSINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 KGSLDQLDE 10
KG+LD+L+E
Sbjct: 79 KGTLDELNE 87


>sp|PUR2_METBU|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Methanococcoides burtonii (strain DSM 6242

Query: 1 VKGSLDQLD 9
V G+LD+LD
Sbjct: 315 VNGTLDELD 323


>sp|RL30_METS5|LARGE ribosomal subunit protein uL30|Metallosphaera sedula (strain ATCC

Query: 1 VKGSLDQ 7
VKG+LDQ
Sbjct: 74 VKGALDQ 80


>sp|DCDA_ARCFU|DIAMINOPIMELATE decarboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 VKGSLDQLDE 10
VK S+D LDE
Sbjct: 115 VKFSVDSLDE 124


>sp|MCRC_METBF|METHYL-COENZYME M reductase operon protein|Methanosarcina barkeri (strain Fusaro /

Query: 1 VKGSLDQLDE 10
VK +LDQL++
Sbjct: 192 VKTTLDQLED 201


>sp|SDX_SACS2|PROBABLE sulredoxin|Saccharolobus solfataricus (strain ATCC 35092

Query: 5 LDQLDE 10
LDQLDE
Sbjct: 50 LDQLDE 55


>sp|PYRF_SULTO|OROTIDINE 5'-phosphate decarboxylase|Sulfurisphaera tokodaii (strain DSM

Query: 1 VKGSLDQLDE 10
++G+LD+L E
Sbjct: 84 IEGALDKLSE 93


>sp|SYL_PYRFU|LEUCINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKGSLDQLDE 10
+KG+ D L+E
Sbjct: 737 IKGTTDALEE 746


>sp|SYA_PYRFU|ALANINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 VKGSLDQLDE 10
V+GS+D L E
Sbjct: 829 VEGSMDDLRE 838


>sp|SYA_PYRAB|ALANINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 VKGSLDQLDE 10
V+GS+D L E
Sbjct: 829 VEGSMDDLRE 838




129|Sequence|641|650|DQLDEVAALI

>sp|NPD1_PYRAE|NAD-DEPENDENT protein deacetylase 1|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 DQLDEVAALI 10
D+LDEVA+LI
Sbjct: 8 DELDEVASLI 17


>sp|RL15_AERPE|LARGE ribosomal subunit protein uL15|Aeropyrum pernix (strain ATCC

Query: 2 QLDEVAALI 10
QLDE+AAL+
Sbjct: 80 QLDEIAALL 88


>sp|HMEC_ARCPA|HDR-LIKE menaquinol oxidoreductase cytochrome b-like|Archaeoglobus profundus

Query: 1 DQLDEVA 7
DQLDE+A
Sbjct: 319 DQLDEIA 325


>sp|Y2121_METS5|PROTEIN Msed_2121|Metallosphaera sedula (strain ATCC 51363

Query: 1 DQLDEVAALI 10
D+L+E+A++I
Sbjct: 46 DELEEIASVI 55


>sp|CHEA_HALS3|CHEMOTAXIS protein CheA|Halobacterium salinarum (strain ATCC 29341

Query: 1 DQLDEVAALI 10
DQLDE+ L+
Sbjct: 302 DQLDELHGLV 311


>sp|EF1A_METTH|ELONGATION factor 1-alpha|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 DEVAALI 10
DEVAALI
Sbjct: 153 DEVAALI 159


>sp|IF2P_THEKO|PROBABLE translation initiation factor IF-2|Thermococcus kodakarensis

Query: 1 DQLDEVAA 8
DQ+DEV A
Sbjct: 845 DQVDEVTA 852


>sp|RS19_NATPD|SMALL ribosomal subunit protein uS19|Natronomonas pharaonis (strain

Query: 2 QLDEVAALI 10
+LDEVA L+
Sbjct: 27 ELDEVAELL 35


>sp|IF2P_THEON|PROBABLE translation initiation factor IF-2|Thermococcus onnurineus (strain

Query: 1 DQLDEVAA 8
DQ+DEV A
Sbjct: 298 DQVDEVTA 305




130|Sequence|646|655|VAALIAATVH

>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 2 AALIAATVH 10
A LIAA VH
Sbjct: 128 AGLIAADVH 136


>sp|Y971_METJA|UNCHARACTERIZED protein MJ0971|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 VAALIAATVH 10
+A LIA +VH
Sbjct: 114 IALLIAISVH 123


>sp|Y2061_THEKO|PUTATIVE phosphate permease TK2061|Thermococcus kodakarensis (strain ATCC

Query: 1 VAALIAATVH 10
VAAL+AAT+
Sbjct: 89 VAALLAATIW 98




131|Sequence|651|660|AATVHDVDHP

>sp|Y1154_METJA|UNCHARACTERIZED protein MJ1154|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AATVHDVDHP 10
+A +HD+ HP
Sbjct: 78 SALLHDIGHP 87


>sp|RL4_HALLT|LARGE ribosomal subunit protein uL4|Halorubrum lacusprofundi (strain

Query: 2 ATVHDVD 8
ATVHD+D
Sbjct: 3 ATVHDLD 9


>sp|ILVD_PYRAE|DIHYDROXY-ACID dehydratase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 AATVHDVDHP 10
A ++DVD P
Sbjct: 365 AGVLYDVDRP 374


>sp|ILVD_PYRCJ|DIHYDROXY-ACID dehydratase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 AATVHDVDHP 10
A ++DVD P
Sbjct: 365 AGVLYDVDRP 374


>sp|DEOC_HALMA|DEOXYRIBOSE-PHOSPHATE aldolase|Haloarcula marismortui (strain ATCC 43049

Query: 1 AATVHDVD 8
ATVHDV+
Sbjct: 156 GATVHDVE 163




132|Sequence|656|665|DVDHPGRTNS

>sp|RPO11_PYRAE|DNA-DIRECTED RNA polymerase subunit Rpo11|Pyrobaculum aerophilum (strain ATCC

Query: 1 DVDHPGRTNS 10
DVDHP + N+
Sbjct: 48 DVDHPLQENA 57


>sp|SYS2_METM5|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DVDHPGR 7
DVDHP +
Sbjct: 328 DVDHPSK 334


>sp|SYS2_METM6|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 DVDHPGR 7
DVDHP +
Sbjct: 328 DVDHPSK 334


>sp|SYS2_METM7|TYPE-2 serine--tRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DVDHPGR 7
DVDHP +
Sbjct: 328 DVDHPSK 334


>sp|AGCS_METMP|SODIUM/ALANINE symporter AgcS|Methanococcus maripaludis (strain DSM 14266

Query: 3 DHPGR 7
DHPGR
Sbjct: 292 DHPGR 296


>sp|Y1255_METJA|UNCHARACTERIZED glycosyltransferase MJ1255|Methanocaldococcus jannaschii (strain

Query: 1 DVDHPGRTNS 10
D+DHP + N+
Sbjct: 295 DLDHPEQGNN 304


>sp|SYFA_METAR|PHENYLALANINE--TRNA ligase alpha subunit|Methanocella arvoryzae (strain DSM 22066

Query: 3 DHPGRTN 9
DHP RT+
Sbjct: 271 DHPARTH 277


>sp|ARCE_THEKO|ARGININE synthetase ArcE|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 4 HPGRTN 9
HPG TN
Sbjct: 257 HPGETN 262


>sp|SYFA_THEAC|PHENYLALANINE--TRNA ligase alpha subunit|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 DVDHP 5
D+DHP
Sbjct: 290 DIDHP 294


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 131 DIDNVGRT 138


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 131 DIDNVGRT 138


>sp|SYA_METS3|ALANINE--TRNA ligase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 DVDHPGRT 8
DVD+ GRT
Sbjct: 123 DVDNVGRT 130


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 131 DIDNVGRT 138


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 131 DIDNVGRT 138


>sp|SYA_METTH|ALANINE--TRNA ligase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 DVDHPGRT 8
DVD+ GRT
Sbjct: 126 DVDNVGRT 133


>sp|SYA_METJA|ALANINE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 129 DIDNVGRT 136


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 131 DIDNVGRT 138


>sp|SYA_META3|ALANINE--TRNA ligase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 DVDHPGRT 8
D+D+ GRT
Sbjct: 131 DIDNVGRT 138


>sp|SYA_METST|ALANINE--TRNA ligase|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 DVDHPGRT 8
DVD+ GRT
Sbjct: 123 DVDNVGRT 130




133|Sequence|661|670|GRTNSFLCNA

>sp|COFC_HALMA|2-PHOSPHO-L-LACTATE guanylyltransferase|Haloarcula marismortui (strain ATCC 43049

Query: 1 GRTNSFLC 8
G TN+F+C
Sbjct: 120 GGTNAFVC 127


>sp|PATS_METJA|SOLUBLE P-type ATPase-like phosphatase|Methanocaldococcus jannaschii

Query: 2 RTNSFLCNA 10
+ N F+CN+
Sbjct: 24 KKNKFICNS 32


>sp|SYC_THEVO|CYSTEINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 GRTNSFLC 8
GR N F+C
Sbjct: 20 GRVNLFVC 27


>sp|KADL_METTH|ADENYLATE kinase homolog MTH_1663|Methanothermobacter thermautotrophicus

Query: 2 RTNSFLCNA 10
RT+ F+C+A
Sbjct: 146 RTSMFVCSA 154




134|Sequence|666|675|FLCNAGSELA

>sp|DHE3_THEPR|GLUTAMATE dehydrogenase|Thermococcus profundus

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 341 FLCNAG 346


>sp|DHE3_THELN|GLUTAMATE dehydrogenase|Thermococcus litoralis (strain ATCC 51850

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 341 FLCNAG 346


>sp|DHE3_THEKO|GLUTAMATE dehydrogenase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 343 FLCNAG 348


>sp|DHE3_PYRHR|GLUTAMATE dehydrogenase|Pyrococcus horikoshii

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 342 FLCNAG 347


>sp|DHE3_PYRHO|GLUTAMATE dehydrogenase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 342 FLCNAG 347


>sp|DHE3_PYRFU|GLUTAMATE dehydrogenase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 342 FLCNAG 347


>sp|DHE3_PYREN|GLUTAMATE dehydrogenase|Pyrococcus endeavori

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 342 FLCNAG 347


>sp|DHE3_PYRAB|GLUTAMATE dehydrogenase|Pyrococcus abyssi (strain GE5 /

Query: 1 FLCNAG 6
FLCNAG
Sbjct: 342 FLCNAG 347


>sp|ARGD_METJA|ACETYLORNITHINE aminotransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLCNAGSE 8
F CN+G+E
Sbjct: 100 FFCNSGAE 107


>sp|ARGD_METKA|ACETYLORNITHINE aminotransferase|Methanopyrus kandleri (strain AV19 /

Query: 1 FLCNAGSE 8
F CN+G+E
Sbjct: 99 FFCNSGTE 106


>sp|ARGD_ARCFU|ACETYLORNITHINE aminotransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLCNAGSE 8
F CN+G+E
Sbjct: 97 FFCNSGAE 104


>sp|ARGD_METAC|ACETYLORNITHINE aminotransferase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FLCNAGSE 8
F CN+G+E
Sbjct: 112 FFCNSGAE 119


>sp|ARGD_METMA|ACETYLORNITHINE aminotransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FLCNAGSE 8
F CN+G+E
Sbjct: 112 FFCNSGAE 119


>sp|HMGCS_PYRNV|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 1 FLCNAGSE 8
F C AGSE
Sbjct: 112 FACKAGSE 119


>sp|HMGCS_PYRIL|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FLCNAGSE 8
F C AGSE
Sbjct: 112 FACKAGSE 119


>sp|HMGCS_PYRAR|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 FLCNAGSE 8
F C AGSE
Sbjct: 111 FACKAGSE 118


>sp|HMGCS_PYRAE|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 FLCNAGSE 8
F C AGSE
Sbjct: 112 FACKAGSE 119


>sp|Y303_ARCFU|UNCHARACTERIZED protein AF_0303|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FLCNAGSEL 9
FLC GSE+
Sbjct: 47 FLCVLGSEV 55


>sp|HMGCS_THESM|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus sibiricus (strain DSM 12597

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|HMGCS_THEON|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus onnurineus (strain NA1)

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|HMGCS_THEKO|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|HMGCS_THEGJ|HYDROXYMETHYLGLUTARYL-COA synthase|Thermococcus gammatolerans (strain DSM 15229

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|HMGCS_PYRHO|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|HMGCS_PYRFU|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|HMGCS_PYRAB|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrococcus abyssi (strain GE5 /

Query: 1 FLCNAGSE 8
F C AG+E
Sbjct: 113 FACKAGTE 120


>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FLCNAGSE 8
LCN G+E
Sbjct: 247 LLCNEGNE 254


>sp|HMGCS_PYRCJ|HYDROXYMETHYLGLUTARYL-COA synthase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 FLCNAGSE 8
F C AGS+
Sbjct: 112 FACKAGSD 119


>sp|HMGCS_CALMQ|HYDROXYMETHYLGLUTARYL-COA synthase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 FLCNAGSE 8
F C AGS+
Sbjct: 111 FACKAGSD 118


>sp|GGGPS_ARCFU|GERANYLGERANYLGLYCERYL phosphate synthase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 LCNAGSELA 10
LCN ELA
Sbjct: 140 LCNIDKELA 148




135|Sequence|671|680|GSELAVLYND

>sp|TRM56_METST|TRNA (cytidine(56)-2'-O)-methyltransferase|Methanosphaera stadtmanae

Query: 1 GSELAVLYND 10
GSEL +Y+D
Sbjct: 148 GSELKTVYDD 157


>sp|APGM_METS5|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase|Metallosphaera sedula (strain ATCC 51363

Query: 1 GSELAVLYN 9
GSEL VL+
Sbjct: 337 GSELVVLFT 345




136|Sequence|676|685|VLYNDTAVLE

>sp|Y280_STAMF|UNCHARACTERIZED solute-binding protein Smar_0280|Staphylothermus marinus (strain

Query: 1 VLYNDTAVLE 10
+ YNDT++LE
Sbjct: 173 IYYNDTSILE 182


>sp|CPGS_PYRFU|CYCLIC 2,3-diphosphoglycerate synthetase|Pyrococcus furiosus (strain ATCC

Query: 1 VLYNDTAVLE 10
V Y+DTA++E
Sbjct: 370 VNYDDTAIVE 379


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 YNDTAVLE 10
YNDT ++E
Sbjct: 495 YNDTGIME 502


>sp|HDRC1_METAC|FERREDOXIN:COB-COM heterodisulfide reductase subunit C|Methanosarcina acetivorans

Query: 1 VLYNDTAVLE 10
VL ND +VLE
Sbjct: 68 VLENDRSVLE 77


>sp|ACDA1_PYRFU|ACETATE--COA ligase [ADP-forming] I subunit|Pyrococcus furiosus (strain ATCC

Query: 1 VLYNDTAVLE 10
VLY TAVL+
Sbjct: 381 VLYCQTAVLD 390


>sp|NADK_AERPE|NAD kinase|Aeropyrum pernix (strain ATCC 700893

Query: 2 LYNDTAV 8
++NDTAV
Sbjct: 136 MFNDTAV 142


>sp|SECD_METP4|PROTEIN-EXPORT membrane protein SecD|Methanolacinia petrolearia (strain DSM 11571

Query: 3 YNDTAVLE 10
YND VLE
Sbjct: 294 YNDAEVLE 301




137|Sequence|681|690|TAVLESHHTA

>sp|GCSPB_SACI7|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ ESHH
Sbjct: 100 TAITESHH 107


>sp|GCSPB_SACI6|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ ESHH
Sbjct: 100 TAITESHH 107


>sp|GCSPB_SACI4|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ ESHH
Sbjct: 100 TAITESHH 107


>sp|GCSPB_SACI3|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ ESHH
Sbjct: 100 TAITESHH 107


>sp|GCSPB_SACI2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ ESHH
Sbjct: 100 TAITESHH 107


>sp|GCSPB_SACI1|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ ESHH
Sbjct: 100 TAITESHH 107


>sp|AROD_METB6|3-DEHYDROQUINATE dehydratase|Methanoregula boonei (strain DSM 21154

Query: 2 AVLESHHTA 10
A++ SHHTA
Sbjct: 103 AIIASHHTA 111


>sp|SYS_THEON|SERINE--TRNA ligase|Thermococcus onnurineus (strain NA1)

Query: 2 AVLESHHT 9
A+LE+H T
Sbjct: 416 AILENHQT 423


>sp|SYS_THEKO|SERINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 AVLESHHT 9
A+LE+H T
Sbjct: 416 AILENHQT 423


>sp|SYS_THEGJ|SERINE--TRNA ligase|Thermococcus gammatolerans (strain DSM 15229

Query: 2 AVLESHHT 9
A+LE+H T
Sbjct: 416 AILENHQT 423


>sp|SYS_IGNH4|SERINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 TAVLESHH 8
TA+LE+H
Sbjct: 418 TAILENHQ 425


>sp|GCSPB_SACS2|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Saccharolobus

Query: 1 TAVLESHH 8
TA+ E HH
Sbjct: 99 TAITEFHH 106




138|Sequence|686|695|SHHTALAFQL

>sp|Y374_METJA|UNCHARACTERIZED protein MJ0374|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 SHHTALAFQL 10
S HT LAF L
Sbjct: 259 SGHTTLAFTL 268


>sp|RAD50_HALSA|DNA double-strand break repair Rad50|Halobacterium salinarum (strain

Query: 1 SHHTALA 7
SH+TALA
Sbjct: 210 SHNTALA 216




139|Sequence|691|700|LAFQLTVKDT

>sp|PCKG_THESM|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus sibiricus (strain DSM 12597

Query: 1 LAFQLTVK 8
LAF+LT+K
Sbjct: 230 LAFRLTIK 237


>sp|PCKG_THEKO|PHOSPHOENOLPYRUVATE carboxykinase [GTP]|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 LAFQLTVK 8
LAF+LT+K
Sbjct: 230 LAFRLTIK 237


>sp|TRUD_HALMA|PROBABLE tRNA pseudouridine synthase D|Haloarcula marismortui (strain ATCC

Query: 2 AFQLTVKDT 10
AF++ V+DT
Sbjct: 139 AFEIVVRDT 147




140|Sequence|696|705|TVKDTKCNIF

>sp|RRP4_METMA|EXOSOME complex component Rrp4|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KDTKCNIF 10
K+T C+IF
Sbjct: 164 KETNCSIF 171


>sp|RRP4_METAC|EXOSOME complex component Rrp4|Methanosarcina acetivorans (strain ATCC

Query: 3 KDTKCNIF 10
K+T C+IF
Sbjct: 164 KETNCSIF 171


>sp|RRP4_METBF|EXOSOME complex component Rrp4|Methanosarcina barkeri (strain Fusaro /

Query: 3 KDTKCNIF 10
K+T C+IF
Sbjct: 164 KETNCSIF 171


>sp|PYRC_METJA|DIHYDROOROTASE jannaschii (strain ATCC 43067

Query: 3 KDTKCNIF 10
KD+K N+F
Sbjct: 109 KDSKINVF 116




141|Sequence|701|710|KCNIFKNIDR

>sp|CAPPA_ARCFU|PHOSPHOENOLPYRUVATE carboxylase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 CNIFKNID 9
C +FKN D
Sbjct: 395 CEVFKNFD 402


>sp|DCD_METS5|DCTP deaminase|Metallosphaera sedula (strain ATCC 51363

Query: 5 FKNIDR 10
FKN+DR
Sbjct: 43 FKNVDR 48


>sp|GLYA_CALMQ|SERINE hydroxymethyltransferase|Caldivirga maquilingensis (strain ATCC

Query: 3 NIFKNIDR 10
+IFKNI R
Sbjct: 245 SIFKNIQR 252


>sp|THIM1_METST|HYDROXYETHYLTHIAZOLE kinase 1|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 CNIFKNI 8
CN+ KNI
Sbjct: 166 CNLIKNI 172


>sp|Y683_METJA|UNCHARACTERIZED protein MJ0683|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 NIFKNIDR 10
NI KNID+
Sbjct: 99 NILKNIDK 106


>sp|RAD50_METMP|DNA double-strand break repair Rad50|Methanococcus maripaludis (strain

Query: 2 CNIFKNI 8
NIFKNI
Sbjct: 950 LNIFKNI 956


>sp|LIPB2_PICTO|PROBABLE octanoyltransferase 2|Picrophilus torridus (strain ATCC 700027

Query: 3 NIFKNID 9
NI+KN+D
Sbjct: 229 NIYKNVD 235


>sp|Y1062_METJA|UNCHARACTERIZED protein MJ1062|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KCNIFKNID 9
K I+KNID
Sbjct: 227 KIKIYKNID 235




142|Sequence|706|715|KNIDRNHYRT

>sp|RGYR_THEKO|REVERSE gyrase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 KNIDRNHYR 9
+N+ RNHYR
Sbjct: 1519 RNLTRNHYR 1527


Query: 1 KNIDRNHY 8
KNIDR+ Y
Sbjct: 223 KNIDRSLY 230


>sp|RGYR_PYRHO|REVERSE gyrase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 KNIDRNHYR 9
KN+ R+H+R
Sbjct: 1433 KNLTRDHFR 1441


>sp|COBQ_METVO|PROBABLE cobyric acid synthase|Methanococcus voltae

Query: 1 KNIDRNHYR 9
KN+D N YR
Sbjct: 97 KNLDYNEYR 105


>sp|HMDH_ARCFU|3-HYDROXY-3-METHYLGLUTARYL-COENZYME A reductase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 IDRNHYRT 10
+DR HY++
Sbjct: 6 LDRRHYKS 13


>sp|SYG_ARCFU|GLYCINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KNIDRNHYRT 10
K+++R HY T
Sbjct: 288 KDVERAHYAT 297


>sp|GSA_META3|GLUTAMATE-1-SEMIALDEHYDE 2,1-aminomutase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 KNIDRNHYRT 10
KN+D N Y T
Sbjct: 319 KNLDDNFYST 328


>sp|DNLI1_HALWD|DNA ligase 1|Haloquadratum walsbyi (strain DSM 16790

Query: 1 KNIDRNH 7
K+I+RNH
Sbjct: 253 KHIERNH 259


>sp|SYI_THEVO|ISOLEUCINE--TRNA ligase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 KNIDRNHY 8
K IDRN Y
Sbjct: 936 KRIDRNEY 943


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 KNIDRNHY 8
KNIDR+ Y
Sbjct: 936 KNIDRDGY 943


>sp|GLGE_PICTO|ALPHA-1,4-GLUCAN:MALTOSE-1-PHOSPHATE maltosyltransferase|Picrophilus torridus (strain ATCC 700027

Query: 1 KNIDRNHYRT 10
K ID+ YRT
Sbjct: 167 KKIDKTDYRT 176


>sp|SYE_HALWD|GLUTAMATE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 4 DRNHYRT 10
D NH+RT
Sbjct: 495 DDNHFRT 501




143|Sequence|711|720|NHYRTLRQAI

>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 NHYRTLRQAI 10
+H+RT+ +A+
Sbjct: 115 SHFRTIAEAV 124


>sp|SYA_HALWD|ALANINE--TRNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 NHYRTL 6
+HYRTL
Sbjct: 350 DHYRTL 355


>sp|DAPA_NATPD|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Natronomonas pharaonis (strain ATCC 35678

Query: 2 HYRTLRQAI 10
HYRT+ A+
Sbjct: 121 HYRTVADAV 129


>sp|GGGPS_METMJ|GERANYLGERANYLGLYCERYL phosphate synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 HYRTLRQA 9
HY LRQA
Sbjct: 100 HYAWLRQA 107


>sp|SYT_STAMF|THREONINE--TRNA ligase|Staphylothermus marinus (strain ATCC 43588

Query: 2 HYRTLRQAI 10
HY+ L QA+
Sbjct: 12 HYKALSQAL 20


>sp|Y636_METJA|UNCHARACTERIZED protein MJ0636|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 NHYRTLRQAI 10
N+Y+T+R +
Sbjct: 319 NNYKTIRSCV 328




144|Sequence|716|725|LRQAIIDMVL

>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LRQAIIDMVL 10
L +A++DMV+
Sbjct: 244 LHEAVLDMVI 253


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 LRQAIIDMVL 10
L +A++DMV+
Sbjct: 244 LHEAVLDMVI 253


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 LRQAIIDMVL 10
L +A++DMV+
Sbjct: 244 LHEAVLDMVI 253




145|Sequence|721|730|IDMVLATEMT

***** No hits found ******


146|Sequence|726|735|ATEMTKHFEH

>sp|KAE1B_PICTO|PROBABLE bifunctional tRNA threonylcarbamoyladenosine

Query: 3 EMTKHFEH 10
EM KHFE+
Sbjct: 496 EMIKHFEN 503


>sp|METE_PYRHO|METHIONINE synthase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 TEMTKHF 8
TEMT+HF
Sbjct: 68 TEMTEHF 74


>sp|HIS1_HALWD|ATP phosphoribosyltransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 1 ATEMTKHFE 9
ATE+T H E
Sbjct: 140 ATELTPHVE 148


>sp|HIS1_HALSA|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 ATEMTKHFE 9
ATE+T H E
Sbjct: 141 ATELTPHVE 149


>sp|HIS1_HALS3|ATP phosphoribosyltransferase|Halobacterium salinarum (strain ATCC

Query: 1 ATEMTKHFE 9
ATE+T H E
Sbjct: 141 ATELTPHVE 149


>sp|DAPA_METBU|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcoides burtonii (strain DSM 6242

Query: 1 ATEMTKHFE 9
A E+TKH E
Sbjct: 83 AVELTKHAE 91


>sp|HIS7_CALMQ|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Caldivirga maquilingensis (strain ATCC 700844

Query: 1 ATEMTKHF 8
ATEM HF
Sbjct: 130 ATEMVPHF 137


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 TEMTKHFEH 10
T KHF H
Sbjct: 174 TNTAKHFHH 182


>sp|METE_PYRAB|METHIONINE synthase|Pyrococcus abyssi (strain GE5 /

Query: 2 TEMTKHF 8
+EMT+HF
Sbjct: 68 SEMTEHF 74


>sp|SYM_METHJ|METHIONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 2 TEMTKHFEH 10
T+M HF+H
Sbjct: 84 TKMQVHFDH 92


>sp|DHQS_METTP|3-DEHYDROQUINATE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 ATEMTKHFEH 10
ATE+ KH ++
Sbjct: 99 ATELGKHVDY 108


>sp|HIS7_METAR|IMIDAZOLEGLYCEROL-PHOSPHATE dehydratase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ATEMTKHF 8
+T MT+HF
Sbjct: 130 STAMTRHF 137




147|Sequence|731|740|KHFEHVNKFV

>sp|TRM1_METTH|TRNA (guanine(26)-N(2))-dimethyltransferase|Methanothermobacter

Query: 2 HFEHVNKF 9
H EHVN F
Sbjct: 247 HHEHVNGF 254


>sp|APGM1_METJA|2,3-BISPHOSPHOGLYCERATE-INDEPENDENT phosphoglycerate mutase 1|Methanocaldococcus jannaschii (strain

Query: 3 FEHVNK 8
FEH+NK
Sbjct: 330 FEHINK 335


>sp|SYT_METHJ|THREONINE--TRNA ligase|Methanospirillum hungatei JF-1 (strain ATCC

Query: 3 FEHVNKF 9
FEH +KF
Sbjct: 259 FEHADKF 265


>sp|MTTB_METBF|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri (strain Fusaro /

Query: 1 KHFEHVN 7
KHF H++
Sbjct: 178 KHFHHID 184


>sp|MTTB_METBA|TRIMETHYLAMINE methyltransferase MttB|Methanosarcina barkeri

Query: 1 KHFEHVN 7
KHF H++
Sbjct: 178 KHFHHID 184


>sp|MTTB1_METMA|TRIMETHYLAMINE methyltransferase MttB1|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KHFEHVN 7
KHF H++
Sbjct: 178 KHFHHID 184


>sp|CARB_PYRFU|CARBAMOYL phosphate synthase large chain|Pyrococcus furiosus (strain ATCC

Query: 1 KHFEHVNKFV 10
K FE VNK +
Sbjct: 361 KKFEEVNKSI 370


>sp|HIS1_METJA|ATP phosphoribosyltransferase|Methanocaldococcus jannaschii (strain

Query: 1 KHFEHVNKFV 10
K+FE +NK V
Sbjct: 126 KYFEKLNKKV 135


>sp|ACDE2_ARCFU|ACETYL-COA decarbonylase/synthase complex subunit epsilon|Archaeoglobus

Query: 3 FEHVNKFV 10
FE V KFV
Sbjct: 52 FERVKKFV 59


>sp|Y1128_METJA|UNCHARACTERIZED protein MJ1128|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KHFEHVNKF 9
KH+EH+++
Sbjct: 277 KHYEHLHRL 285


>sp|EF2_METMT|ELONGATION factor 2|Methanococcoides methylutens

Query: 1 KHFEHVNKFV 10
K +HVNK +
Sbjct: 170 KLIDHVNKLI 179


>sp|EF2_METBU|ELONGATION factor 2|Methanococcoides burtonii (strain DSM 6242

Query: 1 KHFEHVNKFV 10
K +HVNK +
Sbjct: 170 KLIDHVNKLI 179


>sp|EF2_METTE|ELONGATION factor 2|Methanosarcina thermophila

Query: 1 KHFEHVNKFV 10
K +HVNK +
Sbjct: 170 KVIDHVNKLI 179


>sp|EF2_METMA|ELONGATION factor 2|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 KHFEHVNKFV 10
K +HVNK +
Sbjct: 170 KVIDHVNKLI 179


>sp|EF2_METAC|ELONGATION factor 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 KHFEHVNKFV 10
K +HVNK +
Sbjct: 170 KVIDHVNKLI 179


>sp|EF2_METBF|ELONGATION factor 2|Methanosarcina barkeri (strain Fusaro /

Query: 1 KHFEHVNKFV 10
K +HVNK +
Sbjct: 170 KVIDHVNKLI 179




148|Sequence|736|745|VNKFVNSINK

>sp|FAEHP_METMA|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina mazei (strain ATCC BAA-159

Query: 3 KFVNSINK 10
+F+NS+NK
Sbjct: 373 QFINSLNK 380


>sp|FAEHP_METBF|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina barkeri (strain Fusaro /

Query: 3 KFVNSINK 10
+F+NS+NK
Sbjct: 373 QFINSLNK 380


>sp|PROB_METBF|GLUTAMATE 5-kinase|Methanosarcina barkeri (strain Fusaro /

Query: 2 NKFVNSINK 10
N+F+N INK
Sbjct: 5 NEFLNDINK 13


>sp|RL11_HYPBU|LARGE ribosomal subunit protein uL11|Hyperthermus butylicus (strain DSM

Query: 1 VNKFVNSINK 10
VNK V INK
Sbjct: 32 VNKVVEDINK 41


>sp|ARNS_SULAC|SERINE/THREONINE-PROTEIN kinase ArnS|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 1 VNKFVNSIN 9
VNKF NS+
Sbjct: 348 VNKFTNSLE 356


>sp|FAEHP_METAC|BIFUNCTIONAL enzyme Fae/Hps|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 KFVNSINK 10
+F+N++NK
Sbjct: 373 QFINALNK 380


>sp|PC2DH_METJA|PUTATIVE precorrin-2 dehydrogenase|Methanocaldococcus jannaschii (strain

Query: 1 VNKFVNSINK 10
+NKFVNS K
Sbjct: 101 LNKFVNSSTK 110


>sp|Y1312_PYRHO|UPF0212 protein PH1312|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 VNKFVNSINK 10
VNK VN++ K
Sbjct: 28 VNKVVNALEK 37




149|Sequence|741|750|NSINKPMAAE

>sp|SYP_HALLT|PROLINE--TRNA ligase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 3 INKPMAAE 10
I +PMAAE
Sbjct: 446 IKEPMAAE 453


>sp|Y1359_METJA|UPF0273 protein MJ1359|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 INKPMAA 9
INKPM A
Sbjct: 142 INKPMLA 148


>sp|FOLD_METAC|BIFUNCTIONAL protein FolD|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 NSINKPMAA 9
N + KPMAA
Sbjct: 177 NVVGKPMAA 185


>sp|FOLD_METMA|BIFUNCTIONAL protein FolD|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 NSINKPMAA 9
N + KPMAA
Sbjct: 174 NVVGKPMAA 182


>sp|FOLD_METBU|BIFUNCTIONAL protein FolD|Methanococcoides burtonii (strain DSM 6242

Query: 1 NSINKPMAA 9
N + KPMAA
Sbjct: 173 NVVGKPMAA 181


>sp|DAPA_METM5|4-HYDROXY-TETRAHYDRODIPICOLINATE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 NSINKPMA 8
NSIN P+A
Sbjct: 122 NSINVPIA 129




150|Sequence|746|755|PMAAEIEGSD

>sp|Y966_METJA|UNCHARACTERIZED protein MJ0966|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 MAAEIEGSD 10
+ EIEGSD
Sbjct: 108 IVGEIEGSD 116


>sp|Y1363_ARCFU|UNCHARACTERIZED protein AF_1363|Archaeoglobus fulgidus (strain ATCC 49558

Query: 5 EIEGSD 10
EIEGSD
Sbjct: 18 EIEGSD 23


>sp|RS6E_HALSA|SMALL ribosomal subunit protein eS6|Halobacterium salinarum (strain

Query: 1 PMAAEIEGSD 10
PM +++GSD
Sbjct: 62 PMREDVDGSD 71


>sp|RS6E_HALS3|SMALL ribosomal subunit protein eS6|Halobacterium salinarum (strain

Query: 1 PMAAEIEGSD 10
PM +++GSD
Sbjct: 62 PMREDVDGSD 71


>sp|RS6E_NANEQ|SMALL ribosomal subunit protein eS6|Nanoarchaeum equitans (strain

Query: 1 PMAAEIEGS 9
PM E+EG+
Sbjct: 63 PMRKEVEGA 71


>sp|SYDND_AERPE|ASPARTATE--TRNA(ASP/ASN) ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PMAAEIEGSD 10
P+ E+EGS+
Sbjct: 106 PLPLEVEGSE 115


>sp|RPO11_NATPD|DNA-DIRECTED RNA polymerase subunit Rpo11|Natronomonas pharaonis (strain ATCC

Query: 2 MAAEIEGSD 10
+A EIEG D
Sbjct: 13 LAIEIEGED 21


>sp|RS6E_HALWD|SMALL ribosomal subunit protein eS6|Haloquadratum walsbyi (strain DSM

Query: 1 PMAAEIEGSD 10
PM ++ GSD
Sbjct: 61 PMREDVSGSD 70




151|Sequence|751|760|IEGSDCECNP

>sp|IF2G_AERPE|TRANSLATION initiation factor 2 subunit|Aeropyrum pernix (strain ATCC 700893

Query: 6 CECNP 10
CEC+P
Sbjct: 75 CECDP 79


>sp|SUCC_HALMA|SUCCINATE--COA ligase [ADP-forming] subunit beta|Haloarcula marismortui (strain

Query: 2 EGSDCECNP 10
+G+D E NP
Sbjct: 184 DGADTEINP 192


>sp|Y685_METJA|UNCHARACTERIZED ATP-binding protein MJ0685|Methanocaldococcus jannaschii (strain

Query: 2 EGSDCECN 9
EGS C C+
Sbjct: 103 EGSGCYCS 110


>sp|MCRA_METBF|METHYL-COENZYME M reductase subunit alpha|Methanosarcina barkeri (strain Fusaro /

Query: 1 IEGSDCECNP 10
I G+D C P
Sbjct: 88 ISGTDIVCEP 97


>sp|Y1815_ARCFU|UNCHARACTERIZED aminotransferase AF_1815|Archaeoglobus fulgidus (strain ATCC

Query: 5 DCECN 9
DC CN
Sbjct: 55 DCHCN 59


>sp|NDK_METTH|NUCLEOSIDE diphosphate kinase|Methanothermobacter thermautotrophicus (strain

Query: 1 IEGSDC 6
IEG DC
Sbjct: 75 IEGKDC 80




152|Sequence|756|765|CECNPAGKNF

>sp|Y086_METJA|UNCHARACTERIZED protein MJ0086|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CECNPAGKN 9
C NP GKN
Sbjct: 243 CSYNPGGKN 251


>sp|Y908_METJA|UNCHARACTERIZED protein MJ0908|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 CNPAGKNF 10
C P G+NF
Sbjct: 829 CLPTGRNF 836


>sp|SYE_METVS|GLUTAMATE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CECNP 5
C+CNP
Sbjct: 188 CDCNP 192


>sp|SYE_METJA|GLUTAMATE--TRNA ligase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CECNP 5
C+CNP
Sbjct: 186 CDCNP 190


>sp|EF2_THESM|ELONGATION factor 2|Thermococcus sibiricus (strain DSM 12597

Query: 3 CNPAGK 8
CNP GK
Sbjct: 286 CNPKGK 291


>sp|TRPD_CENSY|ANTHRANILATE phosphoribosyltransferase|Cenarchaeum symbiosum (strain A)

Query: 3 CNPAG 7
CNPAG
Sbjct: 179 CNPAG 183


>sp|RPO2_THECE|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermococcus celer

Query: 2 ECNPAGKNF 10
E PAG+NF
Sbjct: 715 EERPAGQNF 723


>sp|EF2_METM5|ELONGATION factor 2|Methanococcus maripaludis (strain C5 /

Query: 2 ECNPAG 7
ECNP G
Sbjct: 285 ECNPNG 290


>sp|GLCDH_THEAC|GLUCOSE 1-dehydrogenase|Thermoplasma acidophilum (strain ATCC 25905

Query: 4 NPAGKNF 10
NP G+NF
Sbjct: 57 NPEGENF 63


>sp|Y3401_METJA|UNCHARACTERIZED protein MJECS01|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 CECNPAG 7
CE NP+G
Sbjct: 57 CEKNPSG 63


>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC

Query: 3 CNPAGKNF 10
CNP NF
Sbjct: 79 CNPLKSNF 86


>sp|DTDA_METVS|D-AMINOACYL-TRNA deacylase|Methanococcus vannielii (strain ATCC 35089

Query: 1 CECNP 5
C CNP
Sbjct: 86 CHCNP 90


>sp|RS2_PYRHO|SMALL ribosomal subunit protein uS2|Pyrococcus horikoshii (strain ATCC

Query: 4 NPAGKNF 10
NPA KNF
Sbjct: 103 NPAVKNF 109


>sp|RS2_PYRFU|SMALL ribosomal subunit protein uS2|Pyrococcus furiosus (strain ATCC

Query: 4 NPAGKNF 10
NPA KNF
Sbjct: 103 NPAVKNF 109


>sp|RS2_PYRAB|SMALL ribosomal subunit protein uS2|Pyrococcus abyssi (strain GE5 /

Query: 4 NPAGKNF 10
NPA KNF
Sbjct: 103 NPAVKNF 109


>sp|RPO2_THEAC|DNA-DIRECTED RNA polymerase subunit Rpo2|Thermoplasma acidophilum (strain ATCC

Query: 5 PAGKNF 10
PAG+NF
Sbjct: 791 PAGQNF 796


>sp|RPO2C_METVS|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanococcus vannielii (strain ATCC

Query: 5 PAGKNF 10
PAG+NF
Sbjct: 202 PAGQNF 207


>sp|RPO2C_METJA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Methanocaldococcus jannaschii (strain

Query: 5 PAGKNF 10
PAG+NF
Sbjct: 206 PAGQNF 211


>sp|RPO2C_HALSA|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 5 PAGKNF 10
PAG+NF
Sbjct: 204 PAGQNF 209


>sp|RPO2C_HALS3|DNA-DIRECTED RNA polymerase subunit Rpo2C|Halobacterium salinarum (strain ATCC

Query: 5 PAGKNF 10
PAG+NF
Sbjct: 204 PAGQNF 209


>sp|RPO2C_ARCFU|DNA-DIRECTED RNA polymerase subunit Rpo2C|Archaeoglobus fulgidus (strain ATCC

Query: 5 PAGKNF 10
PAG+NF
Sbjct: 201 PAGQNF 206


>sp|RS8E_METAR|SMALL ribosomal subunit protein eS8|Methanocella arvoryzae (strain DSM

Query: 4 NPAGKNF 10
NPA KN+
Sbjct: 82 NPANKNY 88


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 2 ECNPAGKN 9
E +PAGKN
Sbjct: 323 EKSPAGKN 330


>sp|AATA_METST|A-TYPE ATP synthase subunit A|Methanosphaera stadtmanae (strain ATCC 43021

Query: 2 ECNPAGK 8
ECN AG+
Sbjct: 579 ECNEAGQ 585


>sp|ILVD_PYRFU|DIHYDROXY-ACID dehydratase|Pyrococcus furiosus (strain ATCC 43587

Query: 4 NPAGKNF 10
+PAGK+F
Sbjct: 304 SPAGKHF 310


>sp|ILVD_PYRAB|DIHYDROXY-ACID dehydratase|Pyrococcus abyssi (strain GE5 /

Query: 4 NPAGKNF 10
+PAGK+F
Sbjct: 304 SPAGKHF 310


>sp|MRE11_METTH|DNA double-strand break repair protein|Methanothermobacter

Query: 2 ECNPAGKN 9
EC+ GKN
Sbjct: 432 ECDVTGKN 439




153|Sequence|761|770|AGKNFPENQI

>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain

Query: 1 AGKNFPENQI 10
A + FPENQ+
Sbjct: 9 AAELFPENQV 18


>sp|RFCL_PICTO|REPLICATION factor C large subunit|Picrophilus torridus (strain ATCC 700027

Query: 2 GKNFPENQI 10
GK+ PEN I
Sbjct: 200 GKSLPENDI 208


>sp|Y609_METJA|UNCHARACTERIZED protein MJ0609|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 AGKNFPENQI 10
AG+N PE I
Sbjct: 37 AGRNLPETFI 46


>sp|KPRS_METJA|RIBOSE-PHOSPHATE pyrophosphokinase|Methanocaldococcus jannaschii (strain ATCC

Query: 3 KNFPENQI 10
K FP+N+I
Sbjct: 30 KRFPDNEI 37


>sp|METX_METTH|PROBABLE acyltransferase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GKNFPENQI 10
GK+FPE I
Sbjct: 99 GKDFPEYTI 107


>sp|SYFA_METMJ|PHENYLALANINE--TRNA ligase alpha subunit|Methanoculleus marisnigri (strain ATCC 35101

Query: 2 GKNFPENQI 10
GK PE Q+
Sbjct: 70 GKGLPERQV 78


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 4 NFPENQI 10
N PENQ+
Sbjct: 101 NIPENQV 107


>sp|THII_ARCFU|PROBABLE tRNA sulfurtransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 AGKNFPENQI 10
+ KNFP N +
Sbjct: 102 SNKNFPMNSV 111


>sp|Y3544_METJA|UNCHARACTERIZED protein MJECL44|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 KNFPENQI 10
+N PENQI
Sbjct: 195 QNIPENQI 202


>sp|LCAO_UNCAR|LONG-CHAIN alcohol oxidase|Uncultured marine euryarchaeote

Query: 3 KNFPENQI 10
KNF NQI
Sbjct: 8 KNFGHNQI 15


>sp|TDXH_METTM|PEROXIREDOXIN marburgensis (strain ATCC BAA-927

Query: 1 AGKNFPENQI 10
A N+P+NQ+
Sbjct: 164 APANWPDNQL 173


>sp|TDXH_METTH|PEROXIREDOXIN thermautotrophicus (strain ATCC 29096

Query: 1 AGKNFPENQI 10
A N+P+NQ+
Sbjct: 164 APANWPDNQL 173


>sp|TDXH_ARCFU|PEROXIREDOXIN fulgidus (strain ATCC 49558

Query: 2 GKNFPENQI 10
G NFPE ++
Sbjct: 6 GDNFPEIEV 14


>sp|Y1170_METST|PUTATIVE nickel insertion protein|Methanosphaera stadtmanae (strain ATCC

Query: 3 KNFPENQI 10
K++P+N+I
Sbjct: 87 KHYPDNEI 94


>sp|DTDA_METMA|D-AMINOACYL-TRNA deacylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 2 GKNFPENQI 10
G NFP+ Q+
Sbjct: 229 GHNFPKYQL 237


>sp|GCSPA_THEGJ|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Thermococcus

Query: 2 GKNFPE 7
GK+FPE
Sbjct: 414 GKHFPE 419


>sp|DTDA_METAC|D-AMINOACYL-TRNA deacylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 2 GKNFPENQI 10
G NFP+ Q+
Sbjct: 229 GHNFPKYQL 237


>sp|RS6E_PYRHO|SMALL ribosomal subunit protein eS6|Pyrococcus horikoshii (strain ATCC

Query: 2 GKNFPEN 8
GK+FPE+
Sbjct: 52 GKDFPED 58


>sp|GCSPA_PYRAB|PROBABLE glycine dehydrogenase (decarboxylating) subunit|Pyrococcus abyssi

Query: 2 GKNFPE 7
GK+FPE
Sbjct: 415 GKHFPE 420


>sp|RS6E_PYRAB|SMALL ribosomal subunit protein eS6|Pyrococcus abyssi (strain GE5 /

Query: 2 GKNFPEN 8
GK FPE+
Sbjct: 52 GKEFPED 58


>sp|ENO_METTH|ENOLASE thermautotrophicus (strain ATCC 29096

Query: 1 AGKNFPENQ 9
AGKN P+ Q
Sbjct: 148 AGKNAPDIQ 156


>sp|RS6E_PYRFU|SMALL ribosomal subunit protein eS6|Pyrococcus furiosus (strain ATCC

Query: 2 GKNFPEN 8
GK FPE+
Sbjct: 52 GKEFPED 58




154|Sequence|766|775|PENQILIKRM

>sp|MTRC_METVS|TETRAHYDROMETHANOPTERIN S-methyltransferase subunit C|Methanococcus vannielii (strain

Query: 1 PENQILI 7
PENQ+L+
Sbjct: 14 PENQVLV 20


>sp|PUR7_NITMS|PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE synthase|Nitrosopumilus maritimus (strain SCM1)

Query: 2 ENQILIKRM 10
EN+IL+K+M
Sbjct: 69 ENEILVKKM 77


>sp|GYRB_ARCFU|DNA gyrase subunit B|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 PENQILIK 8
PEN+ILI+
Sbjct: 585 PENRILIQ 592


>sp|ARGJ_METMP|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 PENQIL 6
PENQ+L
Sbjct: 103 PENQVL 108


>sp|ARGJ_METM7|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 PENQIL 6
PENQ+L
Sbjct: 103 PENQVL 108


>sp|ARGJ_METM6|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C6 /

Query: 1 PENQIL 6
PENQ+L
Sbjct: 103 PENQVL 108


>sp|ARGJ_METM5|GLUTAMATE N-acetyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 PENQIL 6
PENQ+L
Sbjct: 103 PENQVL 108


>sp|CARB_THEAC|CARBAMOYL phosphate synthase large chain|Thermoplasma acidophilum (strain

Query: 1 PENQILIKRM 10
PEN + IKR+
Sbjct: 472 PENLLRIKRI 481


>sp|TRKA2_METMA|TRK system potassium uptake protein|Methanosarcina mazei (strain ATCC

Query: 1 PENQILIKRM 10
P+N+++ KRM
Sbjct: 163 PDNRLVGKRM 172




155|Sequence|771|780|LIKRMMIKCA

>sp|DP2S_THEAC|DNA polymerase II small subunit|Thermoplasma acidophilum (strain ATCC

Query: 2 IKRMMIKC 9
+KR+++KC
Sbjct: 17 LKRIIVKC 24


>sp|Y693_METJA|UNCHARACTERIZED protein MJ0693|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 LIKRMMIKC 9
+ KRM+I+C
Sbjct: 222 IAKRMVIEC 230




156|Sequence|776|785|MIKCADVANP

>sp|SRP54_ARCFU|SIGNAL recognition particle 54 kDa|Archaeoglobus fulgidus (strain ATCC

Query: 1 MIKCADVANP 10
MIK A+VA P
Sbjct: 195 MIKIAEVARP 204


>sp|AMPD_METSM|ANHYDROMEVALONATE phosphate decarboxylase|Methanobrevibacter smithii

Query: 1 MIKCADVANP 10
+IKC D+ P
Sbjct: 207 LIKCGDLEVP 216


>sp|Y640_METJA|UNCHARACTERIZED protein MJ0640|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 4 CADVANP 10
C D++NP
Sbjct: 217 CKDISNP 223




157|Sequence|781|790|DVANPCRPLD

>sp|GLYA_METTP|SERINE hydroxymethyltransferase|Methanothrix thermoacetophila (strain DSM

Query: 1 DVANPCRP 8
DVA CRP
Sbjct: 157 DVARECRP 164


>sp|PFDA_IGNH4|PREFOLDIN subunit alpha|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 ANPCRPLD 10
ANP RP++
Sbjct: 4 ANPSRPVE 11


>sp|METK_METS3|S-ADENOSYLMETHIONINE synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 5 PCRPL 9
PCRP+
Sbjct: 295 PCRPM 299


>sp|OTC_METMP|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVANPCRPL 9
D+A+PC+ L
Sbjct: 122 DLAHPCQIL 130


>sp|OTC_METM7|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C7 /

Query: 1 DVANPCRPL 9
D+A+PC+ L
Sbjct: 122 DLAHPCQIL 130


>sp|OTC_METM5|ORNITHINE carbamoyltransferase|Methanococcus maripaludis (strain C5 /

Query: 1 DVANPCRPL 9
D+A+PC+ L
Sbjct: 122 DLAHPCQIL 130


>sp|OTC_METJA|ORNITHINE carbamoyltransferase|Methanocaldococcus jannaschii (strain ATCC

Query: 1 DVANPCRPL 9
D+A+PC+ L
Sbjct: 123 DLAHPCQIL 131


>sp|MOAA_METM6|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C6 /

Query: 1 DVANPCR 7
DVANP R
Sbjct: 269 DVANPVR 275


>sp|MOAA_METM7|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain C7 /

Query: 1 DVANPCR 7
DVANP R
Sbjct: 269 DVANPLR 275


>sp|LONB_HALSA|ARCHAEAL Lon protease|Halobacterium salinarum (strain ATCC 700922

Query: 2 VANPCRPL 9
+A P RPL
Sbjct: 200 IATPARPL 207


>sp|THIN_METTH|THIAMINE-PHOSPHATE synthase ThiN|Methanothermobacter thermautotrophicus (strain ATCC

Query: 3 ANPCRPLD 10
+NPC P D
Sbjct: 38 SNPCGPED 45


>sp|MOAA_METMP|PROBABLE GTP 3',8-cyclase|Methanococcus maripaludis (strain DSM 14266

Query: 1 DVANPCR 7
DVANP R
Sbjct: 269 DVANPLR 275


>sp|TRUD_NATPD|PROBABLE tRNA pseudouridine synthase D|Natronomonas pharaonis (strain ATCC

Query: 6 CRPLD 10
CRPLD
Sbjct: 46 CRPLD 50




158|Sequence|786|795|CRPLDLCIEW

>sp|KAE1_STAMF|TRNA N6-adenosine threonylcarbamoyltransferase|Staphylothermus marinus

Query: 4 LDLCIEW 10
+D+C EW
Sbjct: 183 VDICAEW 189


>sp|RS7_CALMQ|SMALL ribosomal subunit protein uS7|Caldivirga maquilingensis (strain

Query: 2 RPLDLCIEW 10
R LDL I W
Sbjct: 165 RRLDLAIRW 173


>sp|END4_NATPD|PROBABLE endonuclease 4|Natronomonas pharaonis (strain ATCC 35678

Query: 2 RPLDLCIE 9
+PLD+C++
Sbjct: 166 QPLDVCLD 173


>sp|RPO1N_METTW|DNA-DIRECTED RNA polymerase subunit Rpo1N|Methanothermobacter thermautotrophicus

Query: 1 CRPLDLCIE 9
CR D C+E
Sbjct: 557 CRKCDECLE 565


>sp|GGR2_METTH|DIGERANYLGERANYLGLYCEROPHOSPHOLIPID reductase 2|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 RPLDLC 7
RP DLC
Sbjct: 169 RPADLC 174


>sp|HYD2G_PYRFU|SULFHYDROGENASE 2 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 2 RPLDLCI 8
RP+ LCI
Sbjct: 66 RPIQLCI 72


>sp|RAD50_AERPE|DNA double-strand break repair Rad50|Aeropyrum pernix (strain ATCC

Query: 1 CRPLDLC 7
CR DLC
Sbjct: 402 CRSKDLC 408


>sp|RS7_PYRNV|SMALL ribosomal subunit protein uS7|Pyrobaculum neutrophilum (strain DSM

Query: 2 RPLDLCIEW 10
R LDL + W
Sbjct: 165 RRLDLALRW 173


>sp|KATG_ARCFU|CATALASE-PEROXIDASE fulgidus (strain ATCC 49558

Query: 4 LDLCIEW 10
LD+ +EW
Sbjct: 647 LDMSVEW 653


>sp|RS7_PYRIL|SMALL ribosomal subunit protein uS7|Pyrobaculum islandicum (strain DSM

Query: 2 RPLDLCIEW 10
R LDL + W
Sbjct: 165 RRLDLALRW 173


>sp|GFCR_ARCFU|TRANSCRIPTIONAL regulator GfcR|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 PLDLCIEW 10
P D+ +EW
Sbjct: 47 PSDIYVEW 54


>sp|RS7_PYRAE|SMALL ribosomal subunit protein uS7|Pyrobaculum aerophilum (strain ATCC

Query: 2 RPLDLCIEW 10
R LDL + W
Sbjct: 164 RRLDLALRW 172




159|Sequence|791|800|LCIEWAGRIS

>sp|MPTA_PYRFU|GTP cyclohydrolase MptA|Pyrococcus furiosus (strain ATCC 43587

Query: 3 IEWAGRI 9
IEW GRI
Sbjct: 30 IEWKGRI 36


>sp|RNZ_THEON|RIBONUCLEASE Z|Thermococcus onnurineus (strain NA1)

Query: 3 IEWAGRI 9
IEW GRI
Sbjct: 180 IEWNGRI 186


>sp|RNZ_THEKO|RIBONUCLEASE Z|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 3 IEWAGRI 9
IEW GRI
Sbjct: 180 IEWNGRI 186


>sp|HYD1G_PYRFU|SULFHYDROGENASE 1 subunit gamma|Pyrococcus furiosus (strain ATCC 43587

Query: 1 LCIEWAGRIS 10
LCI AGR++
Sbjct: 82 LCIRKAGRVT 91


>sp|HERA_SULAC|DNA double-strand break repair helicase|Sulfolobus acidocaldarius

Query: 1 LCIEWAGRIS 10
L +WAGRI+
Sbjct: 368 LTKKWAGRIA 377


>sp|HERA_SULTO|DNA double-strand break repair helicase|Sulfurisphaera tokodaii (strain

Query: 1 LCIEWAGRIS 10
L WAGRI+
Sbjct: 367 LTKHWAGRIA 376


>sp|HEM4_METTH|PUTATIVE uroporphyrinogen-III synthase|Methanothermobacter

Query: 1 LCIEWAGRI 9
LC E+AG+I
Sbjct: 67 LCREFAGKI 75


>sp|NFI_IGNH4|ENDONUCLEASE V|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 IEWAGRIS 10
I WA RIS
Sbjct: 194 IAWADRIS 201


>sp|Y501_PYRAB|UPF0235 protein PYRAB05010|Pyrococcus abyssi (strain GE5 /

Query: 4 EWAGRI 9
EW GRI
Sbjct: 29 EWRGRI 34


>sp|PURL_PYRAE|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE synthase subunit PurL|Pyrobaculum aerophilum (strain ATCC 51768

Query: 4 EWAGRIS 10
+WAGR++
Sbjct: 595 KWAGRLT 601


>sp|NADM_PYRAR|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 3 IEWAGRI 9
+EW GR+
Sbjct: 83 LEWLGRV 89


>sp|NADM_PYRAE|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 IEWAGRI 9
+EW GR+
Sbjct: 83 LEWLGRV 89


>sp|NADM_PYRNV|NICOTINAMIDE-NUCLEOTIDE adenylyltransferase|Pyrobaculum neutrophilum (strain DSM 2338

Query: 3 IEWAGRI 9
+EW GR+
Sbjct: 83 LEWLGRV 89




160|Sequence|796|805|AGRISEEYFA

>sp|Y3513_METJA|MCM-LIKE protein MJECL13|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 GRISEEYFA 10
GRI E YF+
Sbjct: 143 GRIKEVYFS 151


>sp|ILVD_METS3|DIHYDROXY-ACID dehydratase|Methanobrevibacter smithii (strain ATCC 35061

Query: 1 AGRISEE 7
AG+ISEE
Sbjct: 169 AGKISEE 175


>sp|CS3HD_SACS2|CRISPR-ASSOCIATED endonuclease Cas3-HD|Saccharolobus solfataricus (strain ATCC

Query: 2 GRISEEYF 9
G+ISE Y+
Sbjct: 25 GKISESYY 32


>sp|MAP2_METTH|METHIONINE aminopeptidase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 2 GRISEEYFA 10
G+I EEY A
Sbjct: 228 GKIREEYHA 236


>sp|DP2L_METTH|DNA polymerase II large subunit|Methanothermobacter thermautotrophicus

Query: 1 AGRISEEY 8
A RISEEY
Sbjct: 460 AFRISEEY 467


>sp|CYAS_METMJ|CYSTEATE synthase|Methanoculleus marisnigri (strain ATCC 35101

Query: 1 AGRISEEYF 9
AGR+ + YF
Sbjct: 220 AGRLPDAYF 228


>sp|SYK_METKA|LYSINE--TRNA ligase|Methanopyrus kandleri (strain AV19 /

Query: 2 GRISEEYFA 10
GR+SE+Y
Sbjct: 88 GRLSEDYLG 96




161|Sequence|801|810|EEYFAQTDEE

>sp|Y3538_METJA|UNCHARACTERIZED protein MJECL38|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 EYFAQTDEE 10
EYF + D+E
Sbjct: 21 EYFKEFDDE 29


>sp|SYW_PYRCJ|TRYPTOPHAN--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 EEYFAQTDEE 10
E YF TD+E
Sbjct: 106 EVYFQMTDDE 115


>sp|SYW_PYRAR|TRYPTOPHAN--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 EEYFAQTDEE 10
E YF TD+E
Sbjct: 106 EVYFQMTDDE 115


>sp|DP2L_HALWD|DNA polymerase II large subunit|Haloquadratum walsbyi (strain DSM 16790

Query: 1 EEYFAQTDE 9
+EY A+TDE
Sbjct: 168 DEYSARTDE 176


>sp|CAS1B_METRM|CRISPR-ASSOCIATED protein Cas1 2|Methanobrevibacter ruminantium (strain ATCC 35063

Query: 1 EEYFAQTD 8
E+YFA TD
Sbjct: 88 EQYFALTD 95


>sp|Y634_METJA|UNCHARACTERIZED KamA family protein MJ0634|Methanocaldococcus jannaschii (strain

Query: 1 EEYFAQTDEE 10
EE+F TDEE
Sbjct: 202 EEFFGITDEE 211


>sp|UVRB_METST|UVRABC system protein B|Methanosphaera stadtmanae (strain ATCC 43021

Query: 1 EEYFAQTD 8
E Y AQTD
Sbjct: 98 EAYVAQTD 105




162|Sequence|806|815|QTDEEKRQGL

>sp|Y1562_METJA|PUTATIVE membrane protein MJ1562|Methanocaldococcus jannaschii (strain ATCC

Query: 3 DEEKRQGL 10
DEE+R+G+
Sbjct: 297 DEERRKGM 304


>sp|Y404_METJA|UNCHARACTERIZED protein MJ0404|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 TDEEKRQGL 10
TDEE ++GL
Sbjct: 49 TDEEPKKGL 57


>sp|DNAJ_HALMA|CHAPERONE protein DnaJ|Haloarcula marismortui (strain ATCC 43049

Query: 2 TDEEKRQ 8
TDEEKRQ
Sbjct: 56 TDEEKRQ 62


>sp|SYE_METBF|GLUTAMATE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 3 DEEKRQG 9
D EKRQG
Sbjct: 311 DSEKRQG 317


>sp|SYE_METAC|GLUTAMATE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 3 DEEKRQG 9
D EKRQG
Sbjct: 311 DSEKRQG 317


>sp|SYE_METBU|GLUTAMATE--TRNA ligase|Methanococcoides burtonii (strain DSM 6242

Query: 3 DEEKRQG 9
D EKRQG
Sbjct: 311 DSEKRQG 317


>sp|DNAJ_HALMT|CHAPERONE protein DnaJ|Haloferax mediterranei (strain ATCC 33500

Query: 2 TDEEKRQ 8
TD+EKRQ
Sbjct: 56 TDDEKRQ 62


>sp|DNAJ_HALLT|CHAPERONE protein DnaJ|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 TDEEKRQ 8
TDE+KRQ
Sbjct: 56 TDEQKRQ 62




163|Sequence|811|820|KRQGLPVVMP

>sp|MCRA_METVA|METHYL-COENZYME M reductase subunit alpha|Methanococcus vannielii

Query: 1 KRQGLPVVMP 10
KRQG+P+ P
Sbjct: 53 KRQGVPLYNP 62


>sp|Y967_METTH|PUTATIVE HTH-type transcriptional regulatory protein|Methanothermobacter

Query: 1 KRQGLPVVMP 10
+R G+P V P
Sbjct: 94 ERHGIPAVAP 103


>sp|OGT_ARCFU|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 KRQGLPVVMP 10
KR LPV++P
Sbjct: 102 KRNPLPVIIP 111


>sp|ASSY_PYRAE|ARGININOSUCCINATE synthase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 KRQGLPV 7
KR GLPV
Sbjct: 160 KRHGLPV 166


>sp|GGGPS_AERPE|GERANYLGERANYLGLYCERYL phosphate synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KRQGLPVVM 9
KR GLPV++
Sbjct: 72 KRSGLPVIL 80


>sp|MTQ2_ARCFU|RELEASE factor glutamine methyltransferase Mtq2|Archaeoglobus fulgidus

Query: 1 KRQGLPVVM 9
+R+GL VVM
Sbjct: 61 RRKGLDVVM 69


>sp|Y089_METJA|UNCHARACTERIZED ABC transporter ATP-binding protein|Methanocaldococcus jannaschii

Query: 3 QGLPVVMP 10
+G+PVV+P
Sbjct: 245 RGIPVVVP 252


>sp|Y273_HALLT|PUTATIVE HTH-type transcriptional regulatory protein|Halorubrum

Query: 2 RQGLPVVMP 10
R G+PV+ P
Sbjct: 93 RHGVPVINP 101


>sp|RTCB_NANEQ|TRNA-SPLICING ligase RtcB|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 KRQGLPVVMP 10
K+ G PV++P
Sbjct: 365 KKYGQPVIIP 374


>sp|GATD_ARCFU|GLUTAMYL-TRNA(GLN) amidotransferase subunit D|Archaeoglobus fulgidus (strain ATCC

Query: 1 KRQGLPVV 8
KR+GLP V
Sbjct: 76 KREGLPDV 83


>sp|OGT_METJA|METHYLATED-DNA--PROTEIN-CYSTEINE methyltransferase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 KRQGLPVVMP 10
KR LP+++P
Sbjct: 118 KRNPLPLIIP 127


>sp|Y2519_HALMA|PUTATIVE HTH-type transcriptional regulatory protein|Haloarcula marismortui

Query: 2 RQGLPVVMP 10
R G+PV+ P
Sbjct: 93 RHGVPVLSP 101


>sp|Y3058_HALWD|PUTATIVE HTH-type transcriptional regulatory protein|Haloquadratum walsbyi

Query: 2 RQGLPVVMP 10
R G+PV+ P
Sbjct: 93 RHGVPVLSP 101


>sp|PUR2_PYRAB|PHOSPHORIBOSYLAMINE--GLYCINE ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 KRQGLPVVMP 10
+R+G+P V P
Sbjct: 84 EREGIPTVGP 93


>sp|COXX_METS5|PROTOHEME IX farnesyltransferase|Metallosphaera sedula (strain ATCC 51363

Query: 5 LPVVMP 10
LPV+MP
Sbjct: 199 LPVIMP 204


>sp|AROB_AERPE|3-DEHYDROQUINATE synthase|Aeropyrum pernix (strain ATCC 700893

Query: 1 KRQGLPVVMP 10
KR+G +VMP
Sbjct: 320 KREGGSIVMP 329


>sp|NIFK_METTH|NITROGENASE molybdenum-iron protein beta chain|Methanothermobacter

Query: 2 RQGLPVV 8
R+GLP+V
Sbjct: 34 RRGLPIV 40


>sp|LEUC_PYRHO|3-ISOPROPYLMALATE dehydratase large subunit|Pyrococcus horikoshii (strain ATCC

Query: 1 KRQGLPVV 8
+R G+PVV
Sbjct: 75 RRHGIPVV 82




164|Sequence|816|825|PVVMPVFDRN

>sp|DNAG_METM7|DNA primase DnaG|Methanococcus maripaludis (strain C7 /

Query: 1 PVVMPVFDRN 10
PV PVFD N
Sbjct: 306 PVTEPVFDDN 315


>sp|AMPA_AERPE|PROBABLE cytosol aminopeptidase|Aeropyrum pernix (strain ATCC 700893

Query: 1 PVVMPVF 7
PVV+PVF
Sbjct: 23 PVVIPVF 29


>sp|ATGT_METMA|TRNA-GUANINE(15) transglycosylase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 PVVMPVFDRN 10
P VMPV + N
Sbjct: 29 PTVMPVINPN 38


>sp|ATGT_METAC|TRNA-GUANINE(15) transglycosylase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 PVVMPVFDRN 10
P VMPV + N
Sbjct: 29 PTVMPVINPN 38


>sp|ATGT_METBF|TRNA-GUANINE(15) transglycosylase|Methanosarcina barkeri (strain Fusaro /

Query: 1 PVVMPVFDRN 10
P VMPV + N
Sbjct: 29 PTVMPVINPN 38


>sp|ATGT_PICTO|TRNA-GUANINE(15) transglycosylase|Picrophilus torridus (strain ATCC 700027

Query: 1 PVVMPVFDRN 10
P VMPV + N
Sbjct: 25 PTVMPVINPN 34


>sp|ATGT_NANEQ|TRNA-GUANINE(15) transglycosylase|Nanoarchaeum equitans (strain Kin4-M)

Query: 1 PVVMPVF 7
P++MP+F
Sbjct: 225 PLIMPLF 231


>sp|DNLI_PICTO|DNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 1 PVVMPVFD 8
P+VM +FD
Sbjct: 335 PIVMFIFD 342


>sp|CHEB_METBF|PROTEIN-GLUTAMATE methylesterase/protein-glutamine glutaminase|Methanosarcina

Query: 3 VMPVFD 8
+MPVFD
Sbjct: 60 IMPVFD 65


>sp|Y150_ARCFU|UNCHARACTERIZED protein AF_0150|Archaeoglobus fulgidus (strain ATCC 49558

Query: 2 VVMPVFDRN 10
VVMP+F N
Sbjct: 4 VVMPLFSSN 12


>sp|RPO3_METST|DNA-DIRECTED RNA polymerase subunit Rpo3|Methanosphaera stadtmanae (strain ATCC

Query: 1 PVVMPVFD 8
P V PV+D
Sbjct: 118 PAVKPVYD 125


>sp|Y4661_HALS3|UPF0146 protein OE_4661R|Halobacterium salinarum (strain ATCC 29341

Query: 1 PVVMPVFDRN 10
PVV+PV +R
Sbjct: 107 PVVVPVSERR 116


>sp|Y2609_HALSA|UPF0146 protein VNG_2609C|Halobacterium salinarum (strain ATCC 700922

Query: 1 PVVMPVFDRN 10
PVV+PV +R
Sbjct: 107 PVVVPVSERR 116


>sp|DNAG_METM5|DNA primase DnaG|Methanococcus maripaludis (strain C5 /

Query: 1 PVVMPVF 7
PV+ PVF
Sbjct: 305 PVIEPVF 311




165|Sequence|821|830|VFDRNTCSIP

>sp|HMDX_METJA|H(2)-FORMING methylenetetrahydromethanopterin dehydrogenase-related protein

Query: 5 NTCSIP 10
NTC+IP
Sbjct: 114 NTCTIP 119


>sp|METK_METTP|S-ADENOSYLMETHIONINE synthase|Methanothrix thermoacetophila (strain DSM 6194

Query: 1 VFDRNTCSIP 10
+FDR+ ++P
Sbjct: 145 IFDRDASTVP 154


>sp|HMD_METKA|5,10-METHENYLTETRAHYDROMETHANOPTERIN hydrogenase|Methanopyrus kandleri (strain AV19 /

Query: 5 NTCSIP 10
NTC+IP
Sbjct: 185 NTCTIP 190


>sp|TRPD_METMA|ANTHRANILATE phosphoribosyltransferase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 VFDRNTC 7
VFD+N C
Sbjct: 196 VFDKNLC 202


>sp|METK_METMP|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain DSM 14266

Query: 1 VFDRNTCSIP 10
VFDR IP
Sbjct: 150 VFDRKRTEIP 159


>sp|METK_METMI|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (Methanococcus deltae)

Query: 1 VFDRNTCSIP 10
VFDR IP
Sbjct: 150 VFDRKRTEIP 159


>sp|METK_METVS|S-ADENOSYLMETHIONINE synthase|Methanococcus vannielii (strain ATCC 35089

Query: 1 VFDRNTCSIP 10
VFDR IP
Sbjct: 150 VFDRKRSEIP 159


>sp|METK_METM7|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C7 /

Query: 1 VFDRNTCSIP 10
VFDR IP
Sbjct: 150 VFDRKRSEIP 159


>sp|METK_METM6|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C6 /

Query: 1 VFDRNTCSIP 10
VFDR IP
Sbjct: 150 VFDRKRSEIP 159


>sp|METK_METM5|S-ADENOSYLMETHIONINE synthase|Methanococcus maripaludis (strain C5 /

Query: 1 VFDRNTCSIP 10
VFDR IP
Sbjct: 150 VFDRKRSEIP 159


>sp|SYW_PYRHO|TRYPTOPHAN--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 FDRNTCSIP 10
F+R C IP
Sbjct: 204 FERKRCLIP 212


>sp|MFNA_METHJ|PROBABLE L-tyrosine/L-aspartate decarboxylase|Methanospirillum hungatei JF-1

Query: 1 VFDRNTCSI 9
+ D+NTC I
Sbjct: 151 LIDKNTCCI 159


>sp|PCNA_METS3|DNA polymerase sliding clamp|Methanobrevibacter smithii (strain ATCC

Query: 1 VFDRNTCSIP 10
+FD C +P
Sbjct: 56 LFDEYVCDVP 65


>sp|TRPD_METBU|ANTHRANILATE phosphoribosyltransferase|Methanococcoides burtonii (strain DSM

Query: 1 VFDRNTCSI 9
VFD++ C++
Sbjct: 193 VFDKDLCNL 201


>sp|PYRF_METMA|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina mazei (strain ATCC

Query: 3 DRNTCSI 9
+RNTC I
Sbjct: 2 ERNTCMI 8


>sp|PYRF_METAC|OROTIDINE 5'-phosphate decarboxylase|Methanosarcina acetivorans (strain

Query: 3 DRNTCSI 9
+RNTC I
Sbjct: 2 ERNTCMI 8


>sp|RS27A_NITMS|SMALL ribosomal subunit protein eS31|Nitrosopumilus maritimus (strain

Query: 3 DRNTC 7
DRNTC
Sbjct: 43 DRNTC 47


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 4 RNTCSIP 10
R TC IP
Sbjct: 208 RKTCEIP 214




166|Sequence|826|835|TCSIPKSQIS

>sp|SYW_METAC|TRYPTOPHAN--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 TCSIPKSQIS 10
+ SIP+SQI+
Sbjct: 323 SSSIPESQIA 332


>sp|Y663_METJA|UNCHARACTERIZED protein MJ0663|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 TCSIPKSQIS 10
TC IP++ IS
Sbjct: 358 TCVIPRNIIS 367


>sp|TRUB_SACS2|PROBABLE tRNA pseudouridine synthase B|Saccharolobus solfataricus (strain

Query: 1 TCSIPK 6
TC IPK
Sbjct: 160 TCEIPK 165




167|Sequence|831|840|KSQISFIDYF

>sp|SYV_HALMA|VALINE--TRNA ligase|Haloarcula marismortui (strain ATCC 43049

Query: 2 SQISFIDYF 10
SQ+SF+D +
Sbjct: 179 SQLSFLDLY 187


>sp|PUR5_METBU|PHOSPHORIBOSYLFORMYLGLYCINAMIDINE cyclo-ligase|Methanococcoides burtonii (strain DSM 6242

Query: 4 ISFIDYF 10
ISF+DY
Sbjct: 100 ISFVDYL 106


>sp|CAS7_METJA|CRISPR-ASSOCIATED protein Cas7/Cst2/DevR|Methanocaldococcus jannaschii (strain ATCC

Query: 4 ISFIDYF 10
+SF+D+F
Sbjct: 61 VSFVDFF 67




168|Sequence|836|845|FIDYFITDMF

>sp|PGK_METMP|PHOSPHOGLYCERATE kinase|Methanococcus maripaludis (strain DSM 14266

Query: 1 FIDYFITDMF 10
F DYF+ D F
Sbjct: 150 FFDYFVNDAF 159


>sp|PGK_METTH|PHOSPHOGLYCERATE kinase|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 1 FIDYFITDMF 10
+DYFI D F
Sbjct: 151 LLDYFINDAF 160


>sp|CAS10_THEON|CRISPR system single-strand-specific deoxyribonuclease

Query: 1 FIDYFITDMF 10
F+ YF+ D F
Sbjct: 482 FVPYFVADYF 491


>sp|PGK_METJA|PHOSPHOGLYCERATE kinase|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 FIDYFITDMF 10
DYF+ D F
Sbjct: 152 LFDYFVNDAF 161


>sp|PGK_METFV|PHOSPHOGLYCERATE kinase|Methanothermus fervidus (strain ATCC 43054

Query: 2 IDYFITDMF 10
+DY+I D F
Sbjct: 146 VDYYINDAF 154


>sp|PGK_METMA|PHOSPHOGLYCERATE kinase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 FIDYFITDMF 10
F+D F+ D F
Sbjct: 148 FVDIFLNDAF 157


>sp|PGK2_METAC|PHOSPHOGLYCERATE kinase 2|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 FIDYFITDMF 10
F+D F+ D F
Sbjct: 148 FVDIFLNDAF 157


>sp|COBS_PYRIL|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 FIDYFITDMF 10
++DY +TD++
Sbjct: 117 WLDYIVTDLY 126


>sp|RS4_SACS2|SMALL ribosomal subunit protein uS4|Saccharolobus solfataricus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|RS4_SACI7|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|RS4_SACI6|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|RS4_SACI4|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|RS4_SACI3|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|RS4_SACI2|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|RS4_SACI1|SMALL ribosomal subunit protein uS4|Saccharolobus islandicus (strain

Query: 1 FIDYFITDMF 10
IDY++T F
Sbjct: 152 LIDYYVTSSF 161


>sp|CAS5B_SACS2|CRISPR-ASSOCIATED protein Cas5 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 FIDYFITDMF 10
FID F +D+F
Sbjct: 60 FIDKFSSDLF 69


>sp|PGK_THEAC|PHOSPHOGLYCERATE kinase|Thermoplasma acidophilum (strain ATCC 25905

Query: 1 FIDYFITDMF 10
DYFI D F
Sbjct: 143 LFDYFIIDAF 152


>sp|PGK_SULTO|PHOSPHOGLYCERATE kinase|Sulfurisphaera tokodaii (strain DSM 16993

Query: 1 FIDYFITDMF 10
+D++I D F
Sbjct: 150 LVDFYINDAF 159


>sp|RL30_HALSA|LARGE ribosomal subunit protein uL30|Halobacterium salinarum (strain ATCC

Query: 2 IDYFITDM 9
ID+ +TDM
Sbjct: 146 IDHLLTDM 153


>sp|RL30_HALS3|LARGE ribosomal subunit protein uL30|Halobacterium salinarum (strain ATCC

Query: 2 IDYFITDM 9
ID+ +TDM
Sbjct: 146 IDHLLTDM 153


>sp|GLPR_HALVD|HTH-TYPE transcriptional regulator GlpR|Haloferax volcanii (strain ATCC

Query: 2 IDYFITD 8
ID FITD
Sbjct: 225 IDLFITD 231


>sp|PGK_METBR|PHOSPHOGLYCERATE kinase|Methanobacterium bryantii

Query: 2 IDYFITDMF 10
ID FI D F
Sbjct: 147 IDIFINDAF 155


>sp|PGK_THEKO|PHOSPHOGLYCERATE kinase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 FIDYFITDMF 10
IDY + D F
Sbjct: 140 LIDYVVNDAF 149


>sp|PGK_THEVO|PHOSPHOGLYCERATE kinase|Thermoplasma volcanium (strain ATCC 51530

Query: 1 FIDYFITDMF 10
DY+I D F
Sbjct: 143 LFDYYIIDAF 152


>sp|PGK_PYRHO|PHOSPHOGLYCERATE kinase|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 IDYFITDMF 10
IDY + D F
Sbjct: 141 IDYVVNDAF 149


>sp|PGK_PYRAB|PHOSPHOGLYCERATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 2 IDYFITDMF 10
IDY + D F
Sbjct: 141 IDYVVNDAF 149




169|Sequence|841|850|ITDMFDAWDA

>sp|SRP54_THEVO|SIGNAL recognition particle 54 kDa|Thermoplasma volcanium (strain ATCC

Query: 1 ITDMFDAWD 9
+ DM+D W+
Sbjct: 325 LKDMYDVWE 333


>sp|SRP54_THEAC|SIGNAL recognition particle 54 kDa|Thermoplasma acidophilum (strain ATCC

Query: 1 ITDMFDAWD 9
+ DM+D W+
Sbjct: 325 LKDMYDVWE 333


>sp|PYRH_PYRAB|URIDYLATE kinase|Pyrococcus abyssi (strain GE5 /

Query: 1 ITDMFDAWDA 10
+TD ++AW A
Sbjct: 93 VTDFWEAWKA 102


>sp|Y1396_METJA|UNCHARACTERIZED protein MJ1396|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 1 ITDMFDAWD 9
ITDM+ W+
Sbjct: 688 ITDMYAPWN 696


>sp|SYR_AERPE|ARGININE--TRNA ligase|Aeropyrum pernix (strain ATCC 700893

Query: 1 ITDMFDAW 8
+ DMF++W
Sbjct: 593 LADMFNSW 600


>sp|MRE11_THEVO|DNA double-strand break repair protein|Thermoplasma volcanium (strain

Query: 3 DMFDAW 8
D+FD W
Sbjct: 50 DLFDTW 55


>sp|RS7_METST|SMALL ribosomal subunit protein uS7|Methanosphaera stadtmanae (strain

Query: 4 MFDAWD 9
+FD WD
Sbjct: 5 LFDKWD 10


>sp|DNAG_METBU|DNA primase DnaG|Methanococcoides burtonii (strain DSM 6242

Query: 1 ITDMFD 6
+TDMFD
Sbjct: 126 LTDMFD 131


>sp|DNAG_METAR|DNA primase DnaG|Methanocella arvoryzae (strain DSM 22066

Query: 1 ITDMFD 6
+TDMFD
Sbjct: 126 LTDMFD 131


>sp|RS3_METLZ|SMALL ribosomal subunit protein uS3|Methanocorpusculum labreanum (strain

Query: 2 TDMFDAWDA 10
TD+F+ +DA
Sbjct: 209 TDIFEEFDA 217


>sp|GVPM2_HALSA|GAS vesicle protein M2|Halobacterium salinarum (strain ATCC 700922

Query: 4 MFDAWDA 10
+FD WDA
Sbjct: 58 IFDGWDA 64


>sp|Y1724_PYRFU|UPF0292 protein PF1724|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITDMFDAWDA 10
I D++D W++
Sbjct: 110 IEDLYDLWES 119


>sp|HVO19_HALVD|PROBABLE S-adenosylmethionine-dependent methyltransferase

Query: 1 ITDMFDAWDA 10
+ D FDAW A
Sbjct: 3 VRDEFDAWAA 12


>sp|GVPM_HALMT|GAS vesicle protein M|Haloferax mediterranei (strain ATCC 33500

Query: 4 MFDAWDA 10
MF+ WDA
Sbjct: 58 MFENWDA 64


>sp|SYV_PYRHO|VALINE--TRNA ligase|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ITDMFDAW 8
+TD+ D W
Sbjct: 450 VTDVLDCW 457


>sp|SYI_METLZ|ISOLEUCINE--TRNA ligase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 1 ITDMFDAW 8
I D+FD W
Sbjct: 515 IPDIFDVW 522


>sp|SYV_PYRFU|VALINE--TRNA ligase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 ITDMFDAW 8
+TD+ D W
Sbjct: 450 VTDVLDCW 457


>sp|MRE11_THEAC|DNA double-strand break repair protein|Thermoplasma acidophilum

Query: 3 DMFDAW 8
D+FD W
Sbjct: 46 DLFDTW 51


>sp|SYV_PYRAB|VALINE--TRNA ligase|Pyrococcus abyssi (strain GE5 /

Query: 1 ITDMFDAW 8
+TD+ D W
Sbjct: 450 VTDVLDCW 457


>sp|SYV_THEKO|VALINE--TRNA ligase|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 1 ITDMFDAW 8
+TD+ D W
Sbjct: 448 VTDVLDCW 455


>sp|SYI_METAR|ISOLEUCINE--TRNA ligase|Methanocella arvoryzae (strain DSM 22066

Query: 1 ITDMFDAW 8
+ D+FD W
Sbjct: 566 VEDIFDVW 573


>sp|SYI_METAC|ISOLEUCINE--TRNA ligase|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 ITDMFDAW 8
+ D+FD W
Sbjct: 517 VEDVFDVW 524


>sp|SYI_METMA|ISOLEUCINE--TRNA ligase|Methanosarcina mazei (strain ATCC BAA-159

Query: 1 ITDMFDAW 8
+ D+FD W
Sbjct: 517 VEDVFDVW 524


>sp|SYI_METBF|ISOLEUCINE--TRNA ligase|Methanosarcina barkeri (strain Fusaro /

Query: 1 ITDMFDAW 8
+ D+FD W
Sbjct: 517 VEDVFDVW 524




170|Sequence|846|855|DAWDAFAHLP

>sp|RGYRB_METKA|REVERSE gyrase subunit B|Methanopyrus kandleri (strain AV19 /

Query: 1 DAWDAFAHL 9
D WD F HL
Sbjct: 977 DLWDVFKHL 985


>sp|SAT_THEON|SULFATE adenylyltransferase|Thermococcus onnurineus (strain NA1)

Query: 1 DAWDAFAHLP 10
+AWD F + P
Sbjct: 296 EAWDMFENFP 305


>sp|APEH_AERPE|ACYLAMINO-ACID-RELEASING enzyme|Aeropyrum pernix (strain ATCC 700893

Query: 1 DAWDAFA 7
D+WD FA
Sbjct: 376 DSWDTFA 382


>sp|RPO10_METS5|DNA-DIRECTED RNA polymerase subunit Rpo10|Metallosphaera sedula (strain ATCC

Query: 1 DAWDAFA 7
D WDAF+
Sbjct: 16 DKWDAFS 22


>sp|SAT_IGNH4|SULFATE adenylyltransferase|Ignicoccus hospitalis (strain KIN4/I /

Query: 1 DAWDAFAHLP 10
+AWD F + P
Sbjct: 299 EAWDIFKNFP 308


>sp|SAT_PYRAB|SULFATE adenylyltransferase|Pyrococcus abyssi (strain GE5 /

Query: 1 DAWDAFAHLP 10
+AWD F P
Sbjct: 296 EAWDLFDEFP 305


>sp|COBS_HALWD|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 AWDAFAHLP 10
AWDAF P
Sbjct: 24 AWDAFRQTP 32


>sp|AATB_METBU|A-TYPE ATP synthase subunit B|Methanococcoides burtonii (strain DSM 6242

Query: 2 AWDAFAHLP 10
AW+ A LP
Sbjct: 429 AWEILAELP 437


>sp|FBPAP_METS5|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Metallosphaera sedula (strain ATCC 51363

Query: 2 AWDAF 6
AWDAF
Sbjct: 73 AWDAF 77


>sp|GUAAB_HALLT|GMP synthase [glutamine-hydrolyzing] subunit B|Halorubrum lacusprofundi

Query: 1 DAWDAFA 7
D W AFA
Sbjct: 224 DPWQAFA 230


>sp|FBPAP_CENSY|FRUCTOSE-1,6-BISPHOSPHATE aldolase/phosphatase|Cenarchaeum symbiosum (strain A)

Query: 2 AWDAF 6
AWDAF
Sbjct: 70 AWDAF 74


>sp|Y544_THEVO|UNCHARACTERIZED solute-binding protein TV0544|Thermoplasma volcanium (strain ATCC

Query: 2 AWDAFAHLP 10
AWD +LP
Sbjct: 306 AWDNVGNLP 314


>sp|COBS_HALLT|ADENOSYLCOBINAMIDE-GDP ribazoletransferase|Halorubrum lacusprofundi (strain ATCC 49239

Query: 2 AWDAFAHLP 10
AW AFA P
Sbjct: 24 AWAAFARSP 32


>sp|Y1052_THEAC|UNCHARACTERIZED solute-binding protein Ta1052|Thermoplasma acidophilum (strain ATCC

Query: 2 AWDAFAHLP 10
AWD +LP
Sbjct: 319 AWDNVGNLP 327




171|Sequence|851|860|FAHLPALMQH

>sp|SAHH_SULTO|ADENOSYLHOMOCYSTEINASE tokodaii (strain DSM 16993

Query: 3 HLPALMQ 9
H+PALM+
Sbjct: 24 HMPALME 30


>sp|SAHH_SULAC|ADENOSYLHOMOCYSTEINASE acidocaldarius (strain ATCC 33909

Query: 3 HLPALMQ 9
H+PALM+
Sbjct: 24 HMPALME 30


>sp|Y2204_ARCFU|UNCHARACTERIZED protein AF_2204|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 FAHLPALM 8
F HLPA++
Sbjct: 201 FQHLPAMV 208


>sp|NQOR_METAC|NAD(P)H dehydrogenase (quinone)|Methanosarcina acetivorans (strain ATCC

Query: 1 FAHLPALMQ 9
FAH+P L +
Sbjct: 60 FAHIPVLTR 68




172|Sequence|856|865|ALMQHLADNY

>sp|DNAK_HALSA|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 700922

Query: 1 ALMQHLADNY 10
A++ HLADN+
Sbjct: 208 AIIDHLADNF 217


>sp|DNAK_HALS3|CHAPERONE protein DnaK|Halobacterium salinarum (strain ATCC 29341

Query: 1 ALMQHLADNY 10
A++ HLADN+
Sbjct: 208 AIIDHLADNF 217


>sp|NFI_DESA1|ENDONUCLEASE V|Desulfurococcus amylolyticus (strain DSM 18924

Query: 5 HLADNY 10
HLADNY
Sbjct: 203 HLADNY 208


>sp|SYP_ARCFU|PROLINE--TRNA ligase|Archaeoglobus fulgidus (strain ATCC 49558

Query: 3 MQHLADNY 10
+ HLADN+
Sbjct: 225 VHHLADNF 232


>sp|PSA_HALWD|PROTEASOME subunit alpha|Haloquadratum walsbyi (strain DSM 16790

Query: 2 LMQHLADNY 10
L +HL +NY
Sbjct: 174 LQEHLEENY 182


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 4 QHLADNY 10
QHL D+Y
Sbjct: 342 QHLIDDY 348


>sp|SYFB_PYRHO|PHENYLALANINE--TRNA ligase beta subunit|Pyrococcus horikoshii (strain ATCC 700860

Query: 1 ALMQHLADNY 10
ALM+HL Y
Sbjct: 489 ALMRHLGFEY 498




173|Sequence|861|870|LADNYKHWKT

>sp|Y1462_ARCFU|UNCHARACTERIZED protein AF_1462|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LADNYKHWKT 10
L NY+ W+T
Sbjct: 103 LFKNYRKWRT 112


>sp|SYA_PICTO|ALANINE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 DNYKHWK 9
DNY +WK
Sbjct: 154 DNYIYWK 160


>sp|SYFB_META3|PHENYLALANINE--TRNA ligase beta subunit|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 3 DNYKH 7
DNYKH
Sbjct: 504 DNYKH 508


>sp|COFH_METJA|5-AMINO-6-(D-RIBITYLAMINO)URACIL--L-TYROSINE 4-hydroxyphenyl transferase|Methanocaldococcus jannaschii (strain

Query: 3 DNYKHW 8
+ YKHW
Sbjct: 218 EEYKHW 223


>sp|SYA_METM7|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C7 /

Query: 3 DNYKHW 8
D+YK+W
Sbjct: 157 DDYKYW 162


>sp|SYA_METMP|ALANINE--TRNA ligase|Methanococcus maripaludis (strain DSM 14266

Query: 3 DNYKHW 8
D+YK+W
Sbjct: 157 DDYKYW 162


>sp|RS8_THEGJ|SMALL ribosomal subunit protein uS8|Thermococcus gammatolerans (strain

Query: 2 ADNYKHWK 9
A NY++W+
Sbjct: 83 AKNYEYWE 90


>sp|TRUB_PYRCJ|PROBABLE tRNA pseudouridine synthase B|Pyrobaculum calidifontis (strain DSM

Query: 1 LADNYKHWK 9
LAD Y WK
Sbjct: 208 LADAYYIWK 216


>sp|PDXS_PICTO|PYRIDOXAL 5'-phosphate synthase subunit PdxS|Picrophilus torridus (strain

Query: 2 ADNYKHWKT 10
A+NY+ +KT
Sbjct: 301 AENYEDYKT 309


>sp|IF2P_THEPD|PROBABLE translation initiation factor IF-2|Thermofilum pendens (strain DSM

Query: 1 LADNYKHW 8
L +NY+ W
Sbjct: 446 LVENYQKW 453


>sp|UBIX_SACS2|FLAVIN prenyltransferase UbiX|Saccharolobus solfataricus (strain ATCC

Query: 3 DNYKHWK 9
D YK WK
Sbjct: 194 DIYKRWK 200


>sp|PELO_METAR|PROTEIN pelota homolog|Methanocella arvoryzae (strain DSM 22066

Query: 6 KHWKT 10
KHWK+
Sbjct: 111 KHWKS 115


>sp|TMBL1_PYRFU|HTH-TYPE sugar sensing transcriptional regulator|Pyrococcus furiosus (strain

Query: 1 LADNYKHW 8
L NY HW
Sbjct: 228 LIQNYVHW 235


>sp|SYT_PYRCJ|THREONINE--TRNA ligase|Pyrobaculum calidifontis (strain DSM 21063

Query: 1 LADNYKH 7
+AD+Y+H
Sbjct: 310 IADSYRH 316


>sp|T1RH_METJA|PUTATIVE type I restriction enzyme|Methanocaldococcus jannaschii (strain

Query: 4 NYKHWK 9
NYK WK
Sbjct: 745 NYKDWK 750


>sp|SYK1_METAC|LYSINE--TRNA ligase 1|Methanosarcina acetivorans (strain ATCC 35395

Query: 1 LADNYKHW 8
LADN W
Sbjct: 397 LADNVSRW 404


>sp|SYA_METVS|ALANINE--TRNA ligase|Methanococcus vannielii (strain ATCC 35089

Query: 3 DNYKHW 8
D YK+W
Sbjct: 157 DEYKYW 162


>sp|SYA_METM6|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C6 /

Query: 3 DNYKHW 8
D YK+W
Sbjct: 157 DEYKYW 162


>sp|SYA_METM5|ALANINE--TRNA ligase|Methanococcus maripaludis (strain C5 /

Query: 3 DNYKHW 8
D YK+W
Sbjct: 157 DEYKYW 162


>sp|SYT_PYRIL|THREONINE--TRNA ligase|Pyrobaculum islandicum (strain DSM 4184

Query: 1 LADNYKH 7
+AD+Y+H
Sbjct: 312 IADSYRH 318


>sp|SYT_PYRAR|THREONINE--TRNA ligase|Pyrobaculum arsenaticum (strain DSM 13514

Query: 1 LADNYKH 7
+AD+Y+H
Sbjct: 311 IADSYRH 317


>sp|OTC_METTH|ORNITHINE carbamoyltransferase|Methanothermobacter thermautotrophicus

Query: 1 LADNYKHWK 9
LAD+YK K
Sbjct: 19 LADDYKEGK 27


>sp|SYT_PYRAE|THREONINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 1 LADNYKH 7
+AD+Y+H
Sbjct: 311 IADSYRH 317


>sp|DSRB_ARCFU|SULFITE reductase, dissimilatory-type subunit beta|Archaeoglobus fulgidus

Query: 1 LADNYKHWK 9
+A NY WK
Sbjct: 23 IAKNYGKWK 31


>sp|SYC_PYRAE|CYSTEINE--TRNA ligase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 DNYKHWK 9
D YK WK
Sbjct: 86 DAYKRWK 92


>sp|SYA_IGNH4|ALANINE--TRNA ligase|Ignicoccus hospitalis (strain KIN4/I /

Query: 3 DNYKHWK 9
DN+ +WK
Sbjct: 153 DNWVYWK 159


>sp|Y002_METJA|UNCHARACTERIZED protein MJ0002|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 YKHWK 9
Y HWK
Sbjct: 114 YHHWK 118




174|Sequence|866|875|KHWKTLDDLK

>sp|Y1155_METJA|UPF0313 protein MJ1155|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 3 WKTLDDLK 10
WK LDD+K
Sbjct: 58 WKNLDDIK 65


>sp|RTCB_THEKO|TRNA-SPLICING ligase RtcB|Thermococcus kodakarensis (strain ATCC BAA-918

Query: 2 HWKTLDDL 9
HW LDD+
Sbjct: 142 HWTQLDDV 149


>sp|HEM1_METLZ|GLUTAMYL-TRNA reductase|Methanocorpusculum labreanum (strain ATCC 43576

Query: 4 KTLDDLK 10
KTLDDLK
Sbjct: 294 KTLDDLK 300


>sp|PRNK_PYRAB|POLYRIBONUCLEOTIDE 5'-hydroxyl-kinase PYRAB01840|Pyrococcus abyssi (strain GE5 /

Query: 2 HWKTLDDLK 10
H+ +LDDLK
Sbjct: 86 HFTSLDDLK 94


>sp|DNLJ_HALWD|DNA ligase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HWKTLDDLK 10
W TL+DL+
Sbjct: 313 QWTTLNDLQ 321


>sp|GLPK_HALVD|GLYCEROL kinase|Haloferax volcanii (strain ATCC 29605

Query: 2 HWKTLDDLK 10
+W+TLD+L+
Sbjct: 464 YWETLDELR 472


>sp|GLPK_HALSA|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 700922

Query: 2 HWKTLDDLK 10
+W +LDDL+
Sbjct: 463 YWDSLDDLR 471


>sp|GLPK_HALS3|GLYCEROL kinase|Halobacterium salinarum (strain ATCC 29341

Query: 2 HWKTLDDLK 10
+W +LDDL+
Sbjct: 463 YWDSLDDLR 471


>sp|RTCB_PYRHO|TRNA-SPLICING ligase RtcB|Pyrococcus horikoshii (strain ATCC 700860

Query: 2 HWKTLDDL 9
HW +DD+
Sbjct: 530 HWTQIDDV 537


>sp|RTCB_PYRFU|TRNA-SPLICING ligase RtcB|Pyrococcus furiosus (strain ATCC 43587

Query: 2 HWKTLDDL 9
HW +DD+
Sbjct: 629 HWTQIDDV 636


>sp|RTCB_PYRAB|TRNA-SPLICING ligase RtcB|Pyrococcus abyssi (strain GE5 /

Query: 2 HWKTLDDL 9
HW +DD+
Sbjct: 576 HWTQIDDV 583


>sp|SYA_HALSA|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 700922

Query: 4 KTLDDLK 10
KT+DDLK
Sbjct: 800 KTIDDLK 806


>sp|SYA_HALS3|ALANINE--TRNA ligase|Halobacterium salinarum (strain ATCC 29341

Query: 4 KTLDDLK 10
KT+DDLK
Sbjct: 800 KTIDDLK 806


>sp|DTDA_CALMQ|D-AMINOACYL-TRNA deacylase|Caldivirga maquilingensis (strain ATCC 700844

Query: 2 HWKTLD 7
HWK+LD
Sbjct: 242 HWKSLD 247


>sp|FDHD_METJA|PROTEIN FdhD|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 2 HWKTLDDLK 10
HW ++ DLK
Sbjct: 121 HWASMFDLK 129


>sp|PUS10_METTM|TRNA pseudouridine synthase Pus10|Methanothermobacter marburgensis

Query: 3 WKTLDD 8
WK LDD
Sbjct: 346 WKRLDD 351


>sp|IDI2_METTH|ISOPENTENYL-DIPHOSPHATE delta-isomerase|Methanothermobacter thermautotrophicus (strain ATCC

Query: 4 KTLDDLK 10
+TLDDLK
Sbjct: 315 ETLDDLK 321


>sp|HELS_SACI5|ATP-DEPENDENT DNA helicase Hel308|Saccharolobus islandicus (strain REY15A)

Query: 3 WKTLDDLK 10
W ++DDLK
Sbjct: 7 WMSIDDLK 14


>sp|GLPK2_SULAC|GLYCEROL kinase 2|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HWKTLDDLK 10
+W ++D+LK
Sbjct: 448 YWNSMDELK 456


>sp|HISX_PYRAE|HISTIDINOL dehydrogenase|Pyrobaculum aerophilum (strain ATCC 51768

Query: 3 WKTLDDLK 10
WK +DD++
Sbjct: 13 WKIVDDVQ 20


>sp|THYX_SULAC|FLAVIN-DEPENDENT thymidylate synthase|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 3 WKTLDDLK 10
WK LD++K
Sbjct: 182 WKMLDEVK 189


>sp|RPO12_SULAC|DNA-DIRECTED RNA polymerase subunit Rpo12|Sulfolobus acidocaldarius (strain

Query: 1 KHWKTLDD 8
K WK LDD
Sbjct: 8 KCWKELDD 15


>sp|SYI_THEAC|ISOLEUCINE--TRNA ligase|Thermoplasma acidophilum (strain ATCC 25905

Query: 3 WKTLDDL 9
WK +DDL
Sbjct: 135 WKQVDDL 141


>sp|CDC64_HALSA|ORC1-TYPE DNA replication protein 4|Halobacterium salinarum (strain ATCC

Query: 3 WKTLD 7
WKTLD
Sbjct: 145 WKTLD 149


>sp|GLPK_HALWD|GLYCEROL kinase|Haloquadratum walsbyi (strain DSM 16790

Query: 2 HWKTLDDLK 10
+W T+D+L+
Sbjct: 463 YWDTVDELR 471


>sp|DPOL2_SACS2|DNA polymerase 2|Saccharolobus solfataricus (strain ATCC 35092

Query: 1 KHWKTLD 7
+ WKTLD
Sbjct: 129 EKWKTLD 135


>sp|COFG_METS3|7,8-DIDEMETHYL-8-HYDROXY-5-DEAZARIBOFLAVIN synthase|Methanobrevibacter smithii (strain ATCC 35061

Query: 3 WKTLDDL 9
W TLD+L
Sbjct: 294 WPTLDEL 300


>sp|SYT_METMJ|THREONINE--TRNA ligase|Methanoculleus marisnigri (strain ATCC 35101

Query: 3 WKTLDDLK 10
WKT +DL+
Sbjct: 360 WKTGEDLE 367


>sp|CDC62_HALSA|ORC1-TYPE DNA replication protein 2|Halobacterium salinarum (strain ATCC

Query: 3 WKTLD 7
WKTLD
Sbjct: 145 WKTLD 149


>sp|TRUD2_METMP|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 HWKTLDDLK 10
+W T+D LK
Sbjct: 65 NWNTMDALK 73


>sp|TRUD_METM5|PROBABLE tRNA pseudouridine synthase D|Methanococcus maripaludis (strain

Query: 2 HWKTLDDLK 10
+W T+D LK
Sbjct: 65 NWNTMDALK 73


>sp|GLPK_HALMA|GLYCEROL kinase|Haloarcula marismortui (strain ATCC 43049

Query: 2 HWKTLDDLK 10
+W T+D+L+
Sbjct: 463 YWDTVDELR 471


>sp|IPYR_PYRFU|INORGANIC pyrophosphatase|Pyrococcus furiosus (strain ATCC 43587

Query: 1 KHWKTLDDL 9
K WK +DD+
Sbjct: 117 KDWKDIDDV 125


>sp|IPYR_PYRAB|INORGANIC pyrophosphatase|Pyrococcus abyssi (strain GE5 /

Query: 1 KHWKTLDDL 9
K WK +DD+
Sbjct: 117 KDWKDIDDV 125


>sp|TRUD1_METJA|PROBABLE tRNA pseudouridine synthase D|Methanocaldococcus jannaschii

Query: 1 KHWKTLDDLK 10
++W TLD ++
Sbjct: 63 RNWTTLDAIR 72


>sp|GLPK1_SULAC|GLYCEROL kinase 1|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 HWKTLDDLK 10
+W +L++LK
Sbjct: 447 YWSSLEELK 455




175|Sequence|871|885|LDDLKCKSLRLPSDS

>sp|METK_META3|S-ADENOSYLMETHIONINE synthase|Methanococcus aeolicus (strain ATCC BAA-1280

Query: 1 LDDLKCKSLRLP 12
D KC+++RLP
Sbjct: 97 FDKEKCETIRLP 108


>sp|AATI_METJA|A-TYPE ATP synthase subunit I|Methanocaldococcus jannaschii (strain ATCC

Query: 1 LDDLKCKSLRLPSDS 15
L+DL+ K+L PS S
Sbjct: 40 LEDLEWKTLLSPSSS 54


>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 6 CKSLRLPS 13
C SLRLP+
Sbjct: 84 CSSLRLPA 91


>sp|RIBA_ARCFU|GTP cyclohydrolase-2|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 LDDLKCKSLRLPSDS 15
L DLK KS+RL +++
Sbjct: 318 LMDLKVKSIRLLTNN 332


>sp|HYPA_METJA|HYDROGENASE maturation factor HypA|Methanocaldococcus jannaschii (strain ATCC

Query: 5 KCKSLRL 11
KCKS+RL
Sbjct: 99 KCKSIRL 105


>sp|Y1252_SULAC|UNCHARACTERIZED protein Saci_1252|Sulfolobus acidocaldarius (strain ATCC 33909

Query: 2 DDLKCKSLRLPSDS 15
D+LK S+ LP+ S
Sbjct: 114 DELKLSSIALPAIS 127


>sp|IF1A2_HALWD|TRANSLATION initiation factor 1A 2|Haloquadratum walsbyi (strain DSM 16790

Query: 7 KSLRLPSD 14
++LR+PSD
Sbjct: 8 RNLRMPSD 15


>sp|G1PDH_PICTO|GLYCEROL-1-PHOSPHATE dehydrogenase [NAD(P)+]|Picrophilus torridus (strain ATCC 700027

Query: 5 KCKSLRLPSD 14
K KS+ PSD
Sbjct: 5 KIKSMHFPSD 14


>sp|IF1A_METKA|TRANSLATION initiation factor 1A|Methanopyrus kandleri (strain AV19 /

Query: 1 LDDLKCKSLRLPSD 14
+DD K +RLP +
Sbjct: 5 IDDETLKKIRLPKE 18


>sp|TFS_METJA|TRANSCRIPTION factor S|Methanocaldococcus jannaschii (strain ATCC 43067

Query: 5 KCKSLRLPSD 14
KC +L LP D
Sbjct: 7 KCNNLMLPKD 16


>sp|DABA_NATPD|PROBABLE inorganic carbon transporter subunit|Natronomonas pharaonis (strain

Query: 2 DDLKCKSLRLPSDS 15
DDL+ + + +P D+
Sbjct: 520 DDLRERGVDIPDDT 533


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 7 KSLRLPSD 14
K LRLP+D
Sbjct: 189 KELRLPAD 196


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 7 KSLRLPSD 14
K LRLP D
Sbjct: 187 KELRLPKD 194


>sp|SYE_PICTO|GLUTAMATE--TRNA ligase|Picrophilus torridus (strain ATCC 700027

Query: 3 DLKCKSLRLPSDS 15
+LK KS+ LP S
Sbjct: 200 ELKLKSMALPDRS 212


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 7 KSLRLPSD 14
K+LRLP D
Sbjct: 30 KNLRLPDD 37




176|Sequence|876|885|CKSLRLPSDS

>sp|Y1698_ARCFU|UPF0098 protein AF_1698|Archaeoglobus fulgidus (strain ATCC 49558

Query: 1 CKSLRLPS 8
C SLRLP+
Sbjct: 84 CSSLRLPA 91


>sp|IF1A2_HALWD|TRANSLATION initiation factor 1A 2|Haloquadratum walsbyi (strain DSM 16790

Query: 2 KSLRLPSD 9
++LR+PSD
Sbjct: 8 RNLRMPSD 15


>sp|PYRB_METJA|ASPARTATE carbamoyltransferase catalytic subunit|Methanocaldococcus

Query: 2 KSLRLPSD 9
K LRLP D
Sbjct: 187 KELRLPKD 194


>sp|PYRB_METBU|ASPARTATE carbamoyltransferase catalytic subunit|Methanococcoides burtonii

Query: 2 KSLRLPSD 9
K LRLP+D
Sbjct: 189 KELRLPAD 196


>sp|IF1A_HALS3|TRANSLATION initiation factor 1A|Halobacterium salinarum (strain ATCC 29341

Query: 2 KSLRLPSD 9
K+LR+P D
Sbjct: 9 KNLRMPED 16


>sp|IF1A1_HALSA|TRANSLATION initiation factor 1A 1|Halobacterium salinarum (strain ATCC

Query: 2 KSLRLPSD 9
K+LR+P D
Sbjct: 9 KNLRMPED 16


>sp|Y857_METTH|PROTEIN MTH_857|Methanothermobacter thermautotrophicus (strain ATCC 29096

Query: 2 KSLRLPSD 9
K+LRLP D
Sbjct: 30 KNLRLPDD 37






THE END